Query 046008
Match_columns 1624
No_of_seqs 426 out of 2061
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 13:28:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046008.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046008hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z3y_A Lysine-specific histone 100.0 2.8E-62 9.6E-67 625.9 40.7 571 605-1354 1-660 (662)
2 2xag_A Lysine-specific histone 100.0 1.3E-59 4.4E-64 611.5 40.2 579 602-1354 169-831 (852)
3 4gut_A Lysine-specific histone 100.0 4.1E-55 1.4E-59 566.0 41.9 537 613-1350 235-775 (776)
4 1rsg_A FMS1 protein; FAD bindi 100.0 1.4E-44 4.9E-49 449.0 35.7 430 861-1354 8-509 (516)
5 1s3e_A Amine oxidase [flavin-c 100.0 1.1E-42 3.6E-47 432.1 37.8 434 861-1354 4-456 (520)
6 1b37_A Protein (polyamine oxid 100.0 1.2E-40 4.2E-45 408.8 35.3 436 860-1355 3-461 (472)
7 2yg5_A Putrescine oxidase; oxi 100.0 7E-41 2.4E-45 407.2 29.9 428 861-1353 5-452 (453)
8 2vvm_A Monoamine oxidase N; FA 100.0 1.2E-40 4.2E-45 410.3 32.0 428 861-1355 39-488 (495)
9 2iid_A L-amino-acid oxidase; f 100.0 5.2E-39 1.8E-43 396.1 30.0 425 859-1354 31-486 (498)
10 3k7m_X 6-hydroxy-L-nicotine ox 100.0 2.1E-38 7.3E-43 382.6 33.4 405 862-1350 2-424 (431)
11 2jae_A L-amino acid oxidase; o 100.0 1.4E-36 4.8E-41 373.6 36.9 435 859-1354 9-487 (489)
12 3i6d_A Protoporphyrinogen oxid 100.0 5.3E-35 1.8E-39 355.3 26.9 419 861-1352 5-468 (470)
13 3ayj_A Pro-enzyme of L-phenyla 100.0 1.2E-34 4.1E-39 369.1 28.5 261 1090-1355 334-682 (721)
14 2ivd_A PPO, PPOX, protoporphyr 100.0 2.1E-34 7.1E-39 352.7 27.4 416 855-1354 10-475 (478)
15 1sez_A Protoporphyrinogen oxid 100.0 1.1E-33 3.9E-38 348.7 25.9 437 860-1354 12-495 (504)
16 3lov_A Protoporphyrinogen oxid 100.0 6.8E-33 2.3E-37 339.3 26.2 428 861-1354 4-467 (475)
17 3ka7_A Oxidoreductase; structu 100.0 1.2E-30 4.2E-35 314.0 27.5 401 862-1350 1-425 (425)
18 4dgk_A Phytoene dehydrogenase; 100.0 1.5E-30 5.2E-35 320.3 26.6 451 861-1357 1-496 (501)
19 4gde_A UDP-galactopyranose mut 100.0 2.5E-30 8.7E-35 318.3 26.7 429 858-1350 7-477 (513)
20 3nks_A Protoporphyrinogen oxid 100.0 2.4E-30 8.1E-35 316.4 21.5 406 861-1351 2-473 (477)
21 3nrn_A Uncharacterized protein 100.0 1.8E-28 6.2E-33 295.9 27.1 392 862-1348 1-403 (421)
22 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 2.6E-28 9E-33 286.5 25.6 230 1095-1352 104-342 (342)
23 2b9w_A Putative aminooxidase; 99.9 1.6E-26 5.3E-31 278.8 27.1 397 860-1349 5-423 (424)
24 4dsg_A UDP-galactopyranose mut 99.9 6.9E-26 2.4E-30 280.0 29.8 424 860-1349 8-452 (484)
25 1yvv_A Amine oxidase, flavin-c 99.9 5E-24 1.7E-28 247.8 26.5 223 1096-1354 103-329 (336)
26 1v0j_A UDP-galactopyranose mut 99.9 4.2E-22 1.4E-26 240.3 11.9 258 860-1203 6-275 (399)
27 1i8t_A UDP-galactopyranose mut 99.8 3.7E-19 1.3E-23 212.4 16.6 251 862-1203 2-261 (367)
28 2bi7_A UDP-galactopyranose mut 99.8 7.3E-19 2.5E-23 211.2 16.9 245 861-1199 3-260 (384)
29 2bcg_G Secretory pathway GDP d 99.7 1.9E-17 6.6E-22 202.8 21.3 390 860-1349 10-438 (453)
30 3hdq_A UDP-galactopyranose mut 99.7 5.3E-17 1.8E-21 195.9 21.2 256 859-1205 27-291 (397)
31 3kkj_A Amine oxidase, flavin-c 99.7 9.2E-15 3.2E-19 158.0 27.1 58 861-919 2-59 (336)
32 1d5t_A Guanine nucleotide diss 99.7 1.5E-15 5.2E-20 185.0 23.5 250 860-1162 5-289 (433)
33 2e1m_C L-glutamate oxidase; L- 99.7 2.8E-17 9.6E-22 178.2 6.6 132 1233-1368 33-168 (181)
34 2e1m_A L-glutamate oxidase; L- 99.6 5.4E-15 1.9E-19 177.2 19.0 82 859-949 42-133 (376)
35 3p1w_A Rabgdi protein; GDI RAB 99.5 6.5E-14 2.2E-18 172.4 11.3 250 859-1161 18-312 (475)
36 2dce_A KIAA1915 protein; swirm 99.4 5.8E-14 2E-18 139.5 5.3 93 606-702 12-106 (111)
37 2fq3_A Transcription regulator 99.4 3.4E-14 1.2E-18 139.1 1.4 88 609-702 13-103 (104)
38 1vg0_A RAB proteins geranylger 99.3 7.3E-11 2.5E-15 149.5 22.8 88 1093-1203 368-461 (650)
39 3k30_A Histamine dehydrogenase 99.3 1E-12 3.6E-17 169.1 5.4 123 781-903 277-433 (690)
40 1o94_A Tmadh, trimethylamine d 99.2 3.2E-12 1.1E-16 165.6 6.9 126 779-904 272-432 (729)
41 1ps9_A 2,4-dienoyl-COA reducta 99.1 4.9E-11 1.7E-15 153.2 6.1 119 784-902 266-414 (671)
42 3oz2_A Digeranylgeranylglycero 99.1 8.2E-09 2.8E-13 121.5 24.3 39 861-899 4-42 (397)
43 3dme_A Conserved exported prot 99.0 1.3E-08 4.5E-13 118.9 23.1 43 861-903 4-46 (369)
44 2e1m_B L-glutamate oxidase; L- 99.0 2.9E-11 1E-15 124.0 -0.4 107 1148-1273 4-111 (130)
45 3nyc_A D-arginine dehydrogenas 99.0 3.7E-08 1.3E-12 115.9 24.2 44 859-903 7-50 (381)
46 3dje_A Fructosyl amine: oxygen 99.0 3.7E-08 1.3E-12 119.2 23.9 42 860-901 5-47 (438)
47 4a9w_A Monooxygenase; baeyer-v 98.9 2.8E-08 9.4E-13 115.4 17.3 42 861-902 3-44 (357)
48 4hb9_A Similarities with proba 98.9 5.7E-07 1.9E-11 106.7 28.5 51 1104-1162 113-165 (412)
49 3rp8_A Flavoprotein monooxygen 98.8 2.5E-07 8.6E-12 110.9 25.4 38 859-896 21-58 (407)
50 3nix_A Flavoprotein/dehydrogen 98.8 1.8E-07 6.1E-12 112.2 23.2 36 861-896 5-40 (421)
51 3ihg_A RDME; flavoenzyme, anth 98.8 9.8E-08 3.4E-12 119.1 19.9 38 860-897 4-41 (535)
52 3cgv_A Geranylgeranyl reductas 98.8 4.6E-07 1.6E-11 107.4 23.5 38 861-898 4-41 (397)
53 1ryi_A Glycine oxidase; flavop 98.8 8.3E-08 2.9E-12 113.4 17.0 40 859-898 15-54 (382)
54 3fmw_A Oxygenase; mithramycin, 98.7 2.7E-06 9.1E-11 107.5 31.2 37 860-896 48-84 (570)
55 1y56_B Sarcosine oxidase; dehy 98.7 1.3E-06 4.4E-11 103.4 25.7 40 860-900 4-43 (382)
56 3ps9_A TRNA 5-methylaminomethy 98.7 1E-07 3.5E-12 122.5 15.5 41 860-900 271-311 (676)
57 3pvc_A TRNA 5-methylaminomethy 98.7 2.4E-07 8.2E-12 119.4 17.8 42 860-901 263-304 (689)
58 3e1t_A Halogenase; flavoprotei 98.6 6.1E-07 2.1E-11 111.5 20.7 35 861-895 7-41 (512)
59 2gf3_A MSOX, monomeric sarcosi 98.6 4E-07 1.4E-11 107.8 17.4 37 861-897 3-39 (389)
60 2gmh_A Electron transfer flavo 98.6 3.6E-06 1.2E-10 106.5 26.7 40 860-899 34-79 (584)
61 2vdc_G Glutamate synthase [NAD 98.6 2.1E-08 7.2E-13 123.3 5.6 114 785-903 51-164 (456)
62 3v76_A Flavoprotein; structura 98.6 1.6E-07 5.3E-12 114.3 13.1 43 859-901 25-67 (417)
63 2qa2_A CABE, polyketide oxygen 98.6 4.5E-06 1.6E-10 103.6 25.7 39 859-897 10-48 (499)
64 2qa1_A PGAE, polyketide oxygen 98.6 3.7E-06 1.3E-10 104.5 24.3 40 858-897 8-47 (500)
65 2r0c_A REBC; flavin adenine di 98.6 3.7E-06 1.3E-10 105.5 24.6 38 861-898 26-63 (549)
66 3i3l_A Alkylhalidase CMLS; fla 98.5 5.2E-07 1.8E-11 114.4 16.2 37 861-897 23-59 (591)
67 3da1_A Glycerol-3-phosphate de 98.5 3.3E-07 1.1E-11 115.5 13.6 41 860-900 17-57 (561)
68 3atr_A Conserved archaeal prot 98.5 1E-06 3.6E-11 107.6 17.4 36 861-896 6-41 (453)
69 2gag_B Heterotetrameric sarcos 98.5 5.3E-07 1.8E-11 107.2 12.1 40 859-899 19-60 (405)
70 2uzz_A N-methyl-L-tryptophan o 98.4 5.1E-07 1.8E-11 106.3 8.8 39 861-899 2-40 (372)
71 2vou_A 2,6-dihydroxypyridine h 98.3 2.4E-06 8.4E-11 102.2 14.0 37 860-896 4-40 (397)
72 1gte_A Dihydropyrimidine dehyd 98.3 2.6E-07 8.8E-12 124.1 5.7 116 784-904 107-231 (1025)
73 2gqf_A Hypothetical protein HI 98.3 2.3E-06 7.7E-11 103.5 13.1 41 861-901 4-44 (401)
74 3nlc_A Uncharacterized protein 98.3 1.8E-06 6.1E-11 108.4 11.6 43 859-901 105-147 (549)
75 2i0z_A NAD(FAD)-utilizing dehy 98.3 2.8E-06 9.6E-11 103.8 12.9 42 859-900 24-65 (447)
76 2xdo_A TETX2 protein; tetracyc 98.3 5.9E-06 2E-10 98.9 15.4 40 860-899 25-64 (398)
77 4ap3_A Steroid monooxygenase; 98.3 3.7E-06 1.3E-10 105.7 13.5 45 860-904 20-64 (549)
78 1w4x_A Phenylacetone monooxyge 98.2 3E-06 1E-10 106.2 12.5 43 860-902 15-57 (542)
79 1y0p_A Fumarate reductase flav 98.2 2.1E-05 7.1E-10 99.2 19.2 42 860-901 125-166 (571)
80 3uox_A Otemo; baeyer-villiger 98.2 2.9E-06 9.8E-11 106.6 11.1 44 860-903 8-51 (545)
81 3fpz_A Thiazole biosynthetic e 98.2 6.8E-07 2.3E-11 104.4 4.7 45 859-903 63-109 (326)
82 1qo8_A Flavocytochrome C3 fuma 98.2 2.6E-05 9E-10 98.2 18.5 42 860-901 120-161 (566)
83 3gwf_A Cyclohexanone monooxyge 98.2 5.3E-06 1.8E-10 104.1 12.0 44 861-904 8-52 (540)
84 2x3n_A Probable FAD-dependent 98.1 3.9E-06 1.3E-10 100.2 10.1 36 861-896 6-41 (399)
85 1pj5_A N,N-dimethylglycine oxi 98.1 6.5E-06 2.2E-10 108.3 12.3 37 860-896 3-40 (830)
86 3axb_A Putative oxidoreductase 98.1 2E-05 6.7E-10 95.7 14.5 38 861-898 23-61 (448)
87 3fg2_P Putative rubredoxin red 98.0 5.2E-05 1.8E-09 91.2 15.6 38 861-898 1-40 (404)
88 3lxd_A FAD-dependent pyridine 98.0 5.5E-05 1.9E-09 91.2 15.3 40 860-899 8-49 (415)
89 4gcm_A TRXR, thioredoxin reduc 97.9 6.6E-06 2.2E-10 94.8 6.4 42 860-902 5-46 (312)
90 4a5l_A Thioredoxin reductase; 97.9 5.9E-06 2E-10 94.7 5.4 35 860-894 3-37 (314)
91 3itj_A Thioredoxin reductase 1 97.9 5.4E-06 1.8E-10 95.7 4.7 47 858-904 19-69 (338)
92 4fk1_A Putative thioredoxin re 97.8 1E-05 3.4E-10 93.2 5.0 39 861-900 6-44 (304)
93 3r9u_A Thioredoxin reductase; 97.8 1.2E-05 4E-10 91.9 5.4 43 860-903 3-46 (315)
94 3f8d_A Thioredoxin reductase ( 97.8 1.4E-05 4.7E-10 91.5 5.3 41 860-902 14-54 (323)
95 3lzw_A Ferredoxin--NADP reduct 97.8 1.2E-05 4.1E-10 92.5 4.4 42 861-902 7-48 (332)
96 1mo9_A ORF3; nucleotide bindin 97.7 2.2E-05 7.4E-10 98.0 6.3 73 830-902 9-84 (523)
97 2zbw_A Thioredoxin reductase; 97.7 1.5E-05 5.2E-10 92.3 4.1 42 861-902 5-46 (335)
98 3urh_A Dihydrolipoyl dehydroge 97.7 1.7E-05 5.7E-10 98.0 4.6 43 860-902 24-66 (491)
99 2gv8_A Monooxygenase; FMO, FAD 97.7 2.4E-05 8.2E-10 95.4 5.8 43 860-902 5-49 (447)
100 3ab1_A Ferredoxin--NADP reduct 97.7 2E-05 6.7E-10 92.7 4.7 42 861-902 14-55 (360)
101 2q7v_A Thioredoxin reductase; 97.7 2.2E-05 7.7E-10 90.7 4.9 43 860-903 7-49 (325)
102 3o0h_A Glutathione reductase; 97.6 2.6E-05 8.9E-10 96.2 4.4 41 861-902 26-66 (484)
103 3cty_A Thioredoxin reductase; 97.6 3.4E-05 1.2E-09 88.9 5.1 42 860-902 15-56 (319)
104 2oln_A NIKD protein; flavoprot 97.6 3.6E-05 1.2E-09 91.7 5.1 37 861-897 4-40 (397)
105 3ihm_A Styrene monooxygenase A 97.6 3.4E-05 1.2E-09 93.8 4.9 37 858-894 19-55 (430)
106 3l8k_A Dihydrolipoyl dehydroge 97.6 2.9E-05 1E-09 95.2 4.3 41 861-901 4-44 (466)
107 2qae_A Lipoamide, dihydrolipoy 97.6 3.2E-05 1.1E-09 94.8 4.5 41 861-901 2-42 (468)
108 1rp0_A ARA6, thiazole biosynth 97.6 3.8E-05 1.3E-09 88.1 4.9 40 861-900 39-79 (284)
109 2xve_A Flavin-containing monoo 97.6 4.5E-05 1.6E-09 93.7 5.6 43 862-904 3-51 (464)
110 4dna_A Probable glutathione re 97.6 3.1E-05 1.1E-09 94.9 4.1 40 861-901 5-44 (463)
111 2q0l_A TRXR, thioredoxin reduc 97.6 5.1E-05 1.7E-09 87.0 5.6 41 862-903 2-43 (311)
112 3fbs_A Oxidoreductase; structu 97.5 4.5E-05 1.5E-09 86.3 4.8 36 861-896 2-37 (297)
113 3lad_A Dihydrolipoamide dehydr 97.5 5.1E-05 1.7E-09 93.2 5.5 41 860-900 2-42 (476)
114 2bry_A NEDD9 interacting prote 97.5 2.8E-05 9.4E-10 96.6 3.2 41 858-898 89-129 (497)
115 1dxl_A Dihydrolipoamide dehydr 97.5 5E-05 1.7E-09 93.0 5.3 42 860-901 5-46 (470)
116 1c0p_A D-amino acid oxidase; a 97.5 6.1E-05 2.1E-09 88.7 5.9 38 860-897 5-42 (363)
117 1vdc_A NTR, NADPH dependent th 97.5 4.9E-05 1.7E-09 88.0 4.9 42 861-902 8-53 (333)
118 3alj_A 2-methyl-3-hydroxypyrid 97.5 5.8E-05 2E-09 89.6 5.7 38 861-898 11-48 (379)
119 4at0_A 3-ketosteroid-delta4-5a 97.5 5.8E-05 2E-09 93.8 5.5 42 860-901 40-81 (510)
120 3jsk_A Cypbp37 protein; octame 97.5 5.6E-05 1.9E-09 89.6 5.0 41 861-901 79-121 (344)
121 2a87_A TRXR, TR, thioredoxin r 97.5 5.6E-05 1.9E-09 88.0 4.7 43 859-902 12-54 (335)
122 1zmd_A Dihydrolipoyl dehydroge 97.5 4.3E-05 1.5E-09 93.9 3.8 42 860-901 5-46 (474)
123 2yqu_A 2-oxoglutarate dehydrog 97.5 5.2E-05 1.8E-09 92.6 4.4 41 862-902 2-42 (455)
124 3d1c_A Flavin-containing putat 97.5 5.7E-05 2E-09 88.6 4.6 41 861-902 4-45 (369)
125 3c96_A Flavin-containing monoo 97.5 7.5E-05 2.6E-09 89.7 5.6 37 861-897 4-41 (410)
126 1trb_A Thioredoxin reductase; 97.5 6E-05 2.1E-09 86.6 4.4 42 861-903 5-46 (320)
127 3c4a_A Probable tryptophan hyd 97.5 6.5E-05 2.2E-09 89.4 4.8 35 862-896 1-37 (381)
128 2gjc_A Thiazole biosynthetic e 97.4 6.6E-05 2.2E-09 88.4 4.7 42 860-901 64-107 (326)
129 1v59_A Dihydrolipoamide dehydr 97.4 5.8E-05 2E-09 92.7 4.2 41 861-901 5-45 (478)
130 3qfa_A Thioredoxin reductase 1 97.4 8.4E-05 2.9E-09 92.7 5.5 36 859-894 30-65 (519)
131 3g3e_A D-amino-acid oxidase; F 97.4 5.6E-05 1.9E-09 88.6 3.6 37 862-898 1-43 (351)
132 1zk7_A HGII, reductase, mercur 97.4 8.5E-05 2.9E-09 91.0 5.1 41 860-901 3-43 (467)
133 1k0i_A P-hydroxybenzoate hydro 97.4 7.6E-05 2.6E-09 88.8 4.5 36 861-896 2-37 (394)
134 3dgz_A Thioredoxin reductase 2 97.4 7.8E-05 2.7E-09 92.0 4.7 41 860-900 5-53 (488)
135 3dk9_A Grase, GR, glutathione 97.4 7.8E-05 2.7E-09 91.6 4.5 42 860-902 19-60 (478)
136 1fec_A Trypanothione reductase 97.4 8.5E-05 2.9E-09 91.9 4.6 42 861-902 3-53 (490)
137 2cul_A Glucose-inhibited divis 97.4 0.00013 4.6E-09 81.0 5.5 35 861-895 3-37 (232)
138 1ojt_A Surface protein; redox- 97.3 8.6E-05 2.9E-09 91.5 4.2 41 861-901 6-46 (482)
139 3ic9_A Dihydrolipoamide dehydr 97.3 8.6E-05 2.9E-09 91.9 4.2 40 861-901 8-47 (492)
140 2hqm_A GR, grase, glutathione 97.3 8E-05 2.8E-09 91.7 3.9 41 860-901 10-50 (479)
141 1fl2_A Alkyl hydroperoxide red 97.3 0.00012 4E-09 83.9 5.0 38 862-901 2-39 (310)
142 2r9z_A Glutathione amide reduc 97.3 9.5E-05 3.2E-09 90.8 4.4 40 861-901 4-43 (463)
143 1lvl_A Dihydrolipoamide dehydr 97.3 8.7E-05 3E-09 90.9 4.0 41 861-902 5-45 (458)
144 1ges_A Glutathione reductase; 97.3 8.3E-05 2.8E-09 90.9 3.6 40 861-901 4-43 (450)
145 1xdi_A RV3303C-LPDA; reductase 97.3 7.5E-05 2.6E-09 92.4 3.1 40 861-901 2-44 (499)
146 3dgh_A TRXR-1, thioredoxin red 97.3 0.00013 4.4E-09 89.9 5.2 34 859-892 7-40 (483)
147 2qcu_A Aerobic glycerol-3-phos 97.3 0.00015 5.3E-09 89.8 5.6 38 861-898 3-40 (501)
148 1onf_A GR, grase, glutathione 97.3 0.00012 4.1E-09 90.7 4.6 41 861-902 2-42 (500)
149 1ebd_A E3BD, dihydrolipoamide 97.3 0.0001 3.6E-09 89.9 3.9 40 861-901 3-42 (455)
150 1d4d_A Flavocytochrome C fumar 97.3 0.00021 7.1E-09 90.3 6.6 43 860-902 125-167 (572)
151 2a8x_A Dihydrolipoyl dehydroge 97.3 0.00012 4.2E-09 89.6 4.2 40 861-901 3-42 (464)
152 3c4n_A Uncharacterized protein 97.2 0.00014 4.9E-09 87.4 4.5 38 861-898 36-75 (405)
153 2wpf_A Trypanothione reductase 97.2 0.00012 4E-09 90.8 3.7 42 861-902 7-57 (495)
154 2rgh_A Alpha-glycerophosphate 97.2 0.00019 6.6E-09 90.6 5.7 38 861-898 32-69 (571)
155 1lqt_A FPRA; NADP+ derivative, 97.2 0.00013 4.6E-09 89.5 3.8 42 861-902 3-51 (456)
156 1cjc_A Protein (adrenodoxin re 97.2 0.00017 5.8E-09 88.7 4.7 44 860-903 5-50 (460)
157 2eq6_A Pyruvate dehydrogenase 97.2 0.00016 5.6E-09 88.7 4.1 40 861-901 6-45 (464)
158 2ywl_A Thioredoxin reductase r 97.2 0.00025 8.4E-09 75.1 4.9 33 862-894 2-34 (180)
159 2gag_A Heterotetrameric sarcos 97.2 0.0002 7E-09 95.7 5.3 41 861-901 128-168 (965)
160 3g5s_A Methylenetetrahydrofola 97.2 0.00029 1E-08 84.6 5.9 41 862-902 2-42 (443)
161 3oc4_A Oxidoreductase, pyridin 97.1 0.00022 7.5E-09 87.1 4.7 36 862-897 3-40 (452)
162 3h28_A Sulfide-quinone reducta 97.1 0.00023 8E-09 86.2 4.7 40 861-900 2-43 (430)
163 1y56_A Hypothetical protein PH 97.1 0.00017 5.7E-09 89.4 3.4 42 861-903 108-149 (493)
164 1hyu_A AHPF, alkyl hydroperoxi 97.1 0.00028 9.5E-09 88.0 5.4 41 859-901 210-250 (521)
165 3s5w_A L-ornithine 5-monooxyge 97.1 0.00018 6.3E-09 87.5 3.7 39 860-898 29-72 (463)
166 3ics_A Coenzyme A-disulfide re 97.1 0.00026 8.9E-09 89.3 5.2 40 858-897 33-74 (588)
167 3h8l_A NADH oxidase; membrane 97.1 0.00021 7.2E-09 85.8 3.7 38 862-899 2-42 (409)
168 2x8g_A Thioredoxin glutathione 97.1 0.00026 8.9E-09 89.6 4.6 34 859-892 105-138 (598)
169 2aqj_A Tryptophan halogenase, 97.1 0.00034 1.2E-08 87.4 5.6 34 861-894 5-41 (538)
170 3kd9_A Coenzyme A disulfide re 97.1 0.00032 1.1E-08 85.5 5.1 39 861-899 3-43 (449)
171 3pl8_A Pyranose 2-oxidase; sub 97.1 0.00032 1.1E-08 89.5 5.3 40 861-900 46-85 (623)
172 2wdq_A Succinate dehydrogenase 97.1 0.00028 9.5E-09 89.4 4.6 39 861-899 7-45 (588)
173 3iwa_A FAD-dependent pyridine 97.0 0.00025 8.6E-09 87.0 3.9 37 861-897 3-41 (472)
174 2e5v_A L-aspartate oxidase; ar 97.0 0.0004 1.4E-08 85.6 5.3 36 863-899 1-36 (472)
175 2weu_A Tryptophan 5-halogenase 97.0 0.00027 9.3E-09 87.4 3.9 34 861-894 2-38 (511)
176 2h88_A Succinate dehydrogenase 97.0 0.00037 1.3E-08 88.9 4.7 39 861-899 18-56 (621)
177 2dkh_A 3-hydroxybenzoate hydro 97.0 0.00038 1.3E-08 89.0 4.6 38 860-897 31-69 (639)
178 1chu_A Protein (L-aspartate ox 97.0 0.00037 1.3E-08 87.4 4.4 38 861-899 8-45 (540)
179 2pyx_A Tryptophan halogenase; 96.9 0.00044 1.5E-08 86.2 4.9 35 860-894 6-52 (526)
180 3ntd_A FAD-dependent pyridine 96.9 0.00044 1.5E-08 86.6 4.9 36 862-897 2-39 (565)
181 2bs2_A Quinol-fumarate reducta 96.9 0.00045 1.5E-08 88.7 5.0 39 861-899 5-43 (660)
182 3cp8_A TRNA uridine 5-carboxym 96.9 0.00052 1.8E-08 87.4 5.3 39 860-898 20-59 (641)
183 2zxi_A TRNA uridine 5-carboxym 96.9 0.00056 1.9E-08 86.9 5.5 38 860-897 26-64 (637)
184 2e4g_A Tryptophan halogenase; 96.9 0.00052 1.8E-08 86.1 5.2 34 861-894 25-61 (550)
185 3ef6_A Toluene 1,2-dioxygenase 96.9 0.0006 2.1E-08 82.2 5.5 38 861-898 2-41 (410)
186 3ces_A MNMG, tRNA uridine 5-ca 96.9 0.00063 2.1E-08 86.7 5.4 38 860-897 27-65 (651)
187 2cdu_A NADPH oxidase; flavoenz 96.8 0.00068 2.3E-08 82.7 4.9 37 862-898 1-39 (452)
188 3klj_A NAD(FAD)-dependent dehy 96.8 0.00068 2.3E-08 81.4 4.6 40 858-897 6-45 (385)
189 1kf6_A Fumarate reductase flav 96.8 0.00062 2.1E-08 86.6 4.4 39 861-899 5-45 (602)
190 1nhp_A NADH peroxidase; oxidor 96.8 0.00074 2.5E-08 82.3 4.7 37 862-898 1-39 (447)
191 4b1b_A TRXR, thioredoxin reduc 96.8 0.0006 2.1E-08 85.6 4.0 40 861-900 42-89 (542)
192 3vrd_B FCCB subunit, flavocyto 96.7 0.00075 2.6E-08 80.6 4.4 36 861-896 2-39 (401)
193 3cgb_A Pyridine nucleotide-dis 96.7 0.00082 2.8E-08 82.8 4.8 38 861-898 36-75 (480)
194 1pn0_A Phenol 2-monooxygenase; 96.7 0.00084 2.9E-08 86.3 5.1 35 861-895 8-47 (665)
195 2gqw_A Ferredoxin reductase; f 96.7 0.0011 3.7E-08 80.0 5.1 38 860-897 6-45 (408)
196 2bc0_A NADH oxidase; flavoprot 96.7 0.0012 4.3E-08 81.4 5.7 38 861-898 35-75 (490)
197 4eqs_A Coenzyme A disulfide re 96.6 0.0009 3.1E-08 81.6 4.2 37 862-898 1-39 (437)
198 1q1r_A Putidaredoxin reductase 96.6 0.0014 4.9E-08 79.6 5.7 37 861-897 4-42 (431)
199 1m6i_A Programmed cell death p 96.6 0.0011 3.6E-08 82.2 4.4 39 859-897 9-49 (493)
200 3gyx_A Adenylylsulfate reducta 96.6 0.0012 4.2E-08 84.7 4.9 38 861-898 22-65 (662)
201 1jnr_A Adenylylsulfate reducta 96.6 0.0013 4.6E-08 84.1 5.2 36 860-895 21-60 (643)
202 3sx6_A Sulfide-quinone reducta 96.6 0.0012 4.1E-08 80.2 4.4 36 861-896 4-42 (437)
203 1kdg_A CDH, cellobiose dehydro 96.5 0.0016 5.6E-08 81.4 5.4 37 859-895 5-41 (546)
204 3hyw_A Sulfide-quinone reducta 96.5 0.0014 4.6E-08 79.7 4.5 35 861-895 2-38 (430)
205 1xhc_A NADH oxidase /nitrite r 96.5 0.0014 4.8E-08 78.0 4.3 37 860-897 7-43 (367)
206 2v3a_A Rubredoxin reductase; a 96.4 0.0018 6.2E-08 77.2 4.9 49 1104-1161 192-241 (384)
207 4g6h_A Rotenone-insensitive NA 96.4 0.0015 5.2E-08 81.1 3.8 38 858-895 39-76 (502)
208 3t37_A Probable dehydrogenase; 96.1 0.0025 8.7E-08 78.9 4.1 37 859-895 15-52 (526)
209 1ju2_A HydroxynitrIle lyase; f 95.9 0.0028 9.7E-08 79.4 3.0 37 860-897 25-61 (536)
210 3q9t_A Choline dehydrogenase a 95.8 0.0044 1.5E-07 78.4 4.3 36 860-895 5-41 (577)
211 1n4w_A CHOD, cholesterol oxida 95.8 0.0054 1.8E-07 76.2 4.7 38 860-897 4-41 (504)
212 1coy_A Cholesterol oxidase; ox 95.2 0.012 4E-07 73.3 5.1 38 859-896 9-46 (507)
213 4b63_A L-ornithine N5 monooxyg 95.1 0.0051 1.8E-07 76.3 1.2 41 859-899 37-77 (501)
214 3qvp_A Glucose oxidase; oxidor 95.1 0.01 3.5E-07 75.1 3.9 36 859-894 17-53 (583)
215 3fim_B ARYL-alcohol oxidase; A 94.9 0.0095 3.3E-07 75.2 3.1 37 861-897 2-39 (566)
216 2jbv_A Choline oxidase; alcoho 94.8 0.015 5.2E-07 72.9 4.3 38 860-897 12-50 (546)
217 1gpe_A Protein (glucose oxidas 94.6 0.019 6.5E-07 72.7 4.5 37 860-896 23-60 (587)
218 4gcm_A TRXR, thioredoxin reduc 94.6 0.022 7.6E-07 65.2 4.7 36 861-896 145-180 (312)
219 2xpp_A IWS1, ECU08_0440; trans 94.2 0.037 1.2E-06 57.8 4.9 81 1438-1521 51-137 (145)
220 1nhp_A NADH peroxidase; oxidor 94.2 0.038 1.3E-06 67.2 5.7 39 860-898 148-186 (447)
221 3nfq_A Transcription factor IW 94.0 0.025 8.7E-07 60.2 3.2 73 1445-1519 73-150 (170)
222 3klj_A NAD(FAD)-dependent dehy 94.0 0.037 1.3E-06 66.3 5.1 39 861-899 146-184 (385)
223 2g1u_A Hypothetical protein TM 93.9 0.051 1.8E-06 56.4 5.4 39 857-895 15-53 (155)
224 1lvl_A Dihydrolipoamide dehydr 93.7 0.045 1.5E-06 66.9 5.2 37 861-897 171-207 (458)
225 2eq6_A Pyruvate dehydrogenase 93.5 0.061 2.1E-06 65.8 5.8 37 861-897 169-205 (464)
226 1v59_A Dihydrolipoamide dehydr 93.5 0.062 2.1E-06 65.8 5.8 37 861-897 183-219 (478)
227 2v3a_A Rubredoxin reductase; a 93.3 0.071 2.4E-06 63.3 5.9 39 861-899 145-183 (384)
228 4a5l_A Thioredoxin reductase; 93.2 0.056 1.9E-06 61.6 4.6 34 860-893 151-184 (314)
229 3fwz_A Inner membrane protein 93.2 0.085 2.9E-06 53.9 5.4 38 858-895 4-41 (140)
230 1ebd_A E3BD, dihydrolipoamide 93.2 0.07 2.4E-06 64.9 5.7 37 861-897 170-206 (455)
231 1xhc_A NADH oxidase /nitrite r 93.1 0.064 2.2E-06 63.7 5.1 36 862-897 144-179 (367)
232 2yqu_A 2-oxoglutarate dehydrog 93.1 0.068 2.3E-06 65.1 5.5 36 861-896 167-202 (455)
233 2x5o_A UDP-N-acetylmuramoylala 93.0 0.065 2.2E-06 65.4 4.9 36 861-896 5-40 (439)
234 1lss_A TRK system potassium up 92.9 0.078 2.7E-06 53.0 4.6 34 861-894 4-37 (140)
235 2gqw_A Ferredoxin reductase; f 92.7 0.095 3.3E-06 63.0 5.9 36 861-896 145-180 (408)
236 1ges_A Glutathione reductase; 92.7 0.094 3.2E-06 63.9 5.8 36 861-896 167-202 (450)
237 1wjt_A Transcription elongatio 92.6 0.029 9.8E-07 55.4 0.8 57 1470-1527 34-91 (103)
238 3ic5_A Putative saccharopine d 92.5 0.079 2.7E-06 51.3 4.0 35 860-894 4-39 (118)
239 3llv_A Exopolyphosphatase-rela 92.4 0.1 3.5E-06 52.9 4.8 35 861-895 6-40 (141)
240 3ic9_A Dihydrolipoamide dehydr 92.3 0.12 3.9E-06 64.0 5.9 37 861-897 174-210 (492)
241 3cgb_A Pyridine nucleotide-dis 92.2 0.096 3.3E-06 64.4 5.0 39 860-898 185-223 (480)
242 3lk7_A UDP-N-acetylmuramoylala 92.1 0.09 3.1E-06 64.4 4.7 35 860-894 8-42 (451)
243 2r9z_A Glutathione amide reduc 92.0 0.13 4.4E-06 63.0 5.8 37 861-897 166-202 (463)
244 1zmd_A Dihydrolipoyl dehydroge 91.9 0.13 4.4E-06 62.9 5.7 37 861-897 178-214 (474)
245 2bc0_A NADH oxidase; flavoprot 91.8 0.13 4.5E-06 63.3 5.6 38 860-897 193-230 (490)
246 1ojt_A Surface protein; redox- 91.7 0.12 4.2E-06 63.4 5.2 37 861-897 185-221 (482)
247 2a8x_A Dihydrolipoyl dehydroge 91.7 0.14 4.6E-06 62.6 5.5 36 861-896 171-206 (464)
248 1q1r_A Putidaredoxin reductase 91.6 0.16 5.4E-06 61.6 6.0 36 861-896 149-184 (431)
249 3d1c_A Flavin-containing putat 91.6 0.14 4.7E-06 59.7 5.2 36 861-896 166-201 (369)
250 3kd9_A Coenzyme A disulfide re 91.4 0.17 5.6E-06 61.6 5.8 40 860-899 147-186 (449)
251 2hmt_A YUAA protein; RCK, KTN, 91.3 0.14 4.8E-06 51.3 4.2 34 861-894 6-39 (144)
252 1dxl_A Dihydrolipoamide dehydr 91.2 0.12 4.1E-06 63.0 4.4 37 861-897 177-213 (470)
253 3ef6_A Toluene 1,2-dioxygenase 91.1 0.18 6.2E-06 60.5 5.7 37 860-896 142-178 (410)
254 2q0l_A TRXR, thioredoxin reduc 91.1 0.17 5.8E-06 57.6 5.1 35 861-895 143-177 (311)
255 4eqs_A Coenzyme A disulfide re 91.0 0.16 5.4E-06 61.8 5.2 37 861-897 147-183 (437)
256 3ado_A Lambda-crystallin; L-gu 91.0 0.15 5.2E-06 59.8 4.7 34 860-893 5-38 (319)
257 2hqm_A GR, grase, glutathione 90.8 0.2 6.9E-06 61.5 5.9 37 861-897 185-221 (479)
258 1onf_A GR, grase, glutathione 90.8 0.19 6.4E-06 62.2 5.5 37 861-897 176-212 (500)
259 1id1_A Putative potassium chan 90.7 0.23 7.8E-06 51.2 5.3 33 861-893 3-35 (153)
260 1fl2_A Alkyl hydroperoxide red 90.6 0.18 6.1E-06 57.3 4.8 36 861-896 144-179 (310)
261 2qae_A Lipoamide, dihydrolipoy 90.6 0.22 7.4E-06 60.9 5.8 37 861-897 174-210 (468)
262 1zk7_A HGII, reductase, mercur 90.3 0.21 7.3E-06 60.9 5.4 36 861-896 176-211 (467)
263 3urh_A Dihydrolipoyl dehydroge 90.1 0.22 7.5E-06 61.3 5.2 37 861-897 198-234 (491)
264 3c85_A Putative glutathione-re 90.0 0.24 8.1E-06 52.6 4.8 35 860-894 38-73 (183)
265 1vdc_A NTR, NADPH dependent th 90.0 0.2 7E-06 57.5 4.6 37 860-896 158-194 (333)
266 2cdu_A NADPH oxidase; flavoenz 89.9 0.22 7.5E-06 60.5 5.0 36 861-896 149-184 (452)
267 3lxd_A FAD-dependent pyridine 89.8 0.27 9.1E-06 59.0 5.6 36 861-896 152-187 (415)
268 3fg2_P Putative rubredoxin red 89.8 0.28 9.4E-06 58.7 5.7 36 861-896 142-177 (404)
269 2q7v_A Thioredoxin reductase; 89.8 0.23 7.7E-06 57.1 4.8 35 861-895 152-186 (325)
270 3dk9_A Grase, GR, glutathione 89.8 0.25 8.6E-06 60.4 5.5 36 861-896 187-222 (478)
271 3ntd_A FAD-dependent pyridine 89.7 0.24 8.4E-06 61.7 5.4 37 860-896 150-186 (565)
272 3l8k_A Dihydrolipoyl dehydroge 89.7 0.28 9.7E-06 59.9 5.8 37 861-897 172-208 (466)
273 1trb_A Thioredoxin reductase; 89.6 0.23 7.9E-06 56.6 4.6 35 861-895 145-179 (320)
274 3i83_A 2-dehydropantoate 2-red 89.6 0.26 8.9E-06 57.3 5.1 34 861-894 2-35 (320)
275 2xve_A Flavin-containing monoo 89.5 0.26 8.9E-06 60.4 5.3 37 860-896 196-232 (464)
276 2a87_A TRXR, TR, thioredoxin r 89.5 0.24 8.1E-06 57.3 4.7 36 861-896 155-190 (335)
277 1f0y_A HCDH, L-3-hydroxyacyl-C 89.5 0.28 9.7E-06 56.5 5.3 33 861-893 15-47 (302)
278 4e12_A Diketoreductase; oxidor 89.2 0.26 9E-06 56.4 4.7 33 861-893 4-36 (283)
279 3oc4_A Oxidoreductase, pyridin 89.2 0.32 1.1E-05 59.1 5.8 36 861-896 147-182 (452)
280 2zbw_A Thioredoxin reductase; 89.1 0.25 8.6E-06 56.7 4.5 36 861-896 152-187 (335)
281 3gwf_A Cyclohexanone monooxyge 89.0 0.24 8.3E-06 62.0 4.6 36 860-895 177-212 (540)
282 4b1b_A TRXR, thioredoxin reduc 88.9 0.29 9.8E-06 61.5 5.1 34 861-894 223-256 (542)
283 3itj_A Thioredoxin reductase 1 88.8 0.29 9.8E-06 56.0 4.6 36 860-895 172-207 (338)
284 1ks9_A KPA reductase;, 2-dehyd 88.6 0.35 1.2E-05 54.6 5.1 33 862-894 1-33 (291)
285 3hn2_A 2-dehydropantoate 2-red 88.5 0.28 9.6E-06 56.9 4.4 34 861-894 2-35 (312)
286 3lad_A Dihydrolipoamide dehydr 88.5 0.4 1.4E-05 58.5 5.9 36 861-896 180-215 (476)
287 4ap3_A Steroid monooxygenase; 88.5 0.27 9.1E-06 61.8 4.4 36 860-895 190-225 (549)
288 3l4b_C TRKA K+ channel protien 88.4 0.27 9.3E-06 53.7 4.0 34 862-895 1-34 (218)
289 3eag_A UDP-N-acetylmuramate:L- 88.4 0.33 1.1E-05 56.8 4.9 35 861-895 4-39 (326)
290 3cty_A Thioredoxin reductase; 88.4 0.29 9.9E-06 56.0 4.3 35 861-895 155-189 (319)
291 2ew2_A 2-dehydropantoate 2-red 88.4 0.33 1.1E-05 55.5 4.7 34 861-894 3-36 (316)
292 3uox_A Otemo; baeyer-villiger 88.3 0.26 8.8E-06 61.9 4.2 36 860-895 184-219 (545)
293 2gv8_A Monooxygenase; FMO, FAD 88.3 0.31 1E-05 59.1 4.7 37 860-896 211-248 (447)
294 2wpf_A Trypanothione reductase 88.3 0.31 1.1E-05 60.2 4.8 37 861-897 191-230 (495)
295 1fec_A Trypanothione reductase 88.3 0.34 1.2E-05 59.7 5.1 37 861-897 187-226 (490)
296 3s5w_A L-ornithine 5-monooxyge 88.3 0.26 8.7E-06 59.8 3.9 37 860-896 226-264 (463)
297 3doj_A AT3G25530, dehydrogenas 88.2 0.42 1.4E-05 55.4 5.6 37 858-894 18-54 (310)
298 3ics_A Coenzyme A-disulfide re 88.2 0.42 1.4E-05 60.1 6.0 38 861-898 187-224 (588)
299 4dio_A NAD(P) transhydrogenase 88.1 0.39 1.3E-05 58.1 5.3 35 860-894 189-223 (405)
300 2dpo_A L-gulonate 3-dehydrogen 88.1 0.34 1.2E-05 56.8 4.7 34 861-894 6-39 (319)
301 1k0i_A P-hydroxybenzoate hydro 87.9 13 0.00046 43.4 18.4 43 1112-1162 117-162 (394)
302 3dfz_A SIRC, precorrin-2 dehyd 87.8 0.38 1.3E-05 53.7 4.6 36 858-893 28-63 (223)
303 1zej_A HBD-9, 3-hydroxyacyl-CO 87.8 0.37 1.3E-05 55.9 4.7 35 859-894 10-44 (293)
304 2raf_A Putative dinucleotide-b 87.7 0.46 1.6E-05 52.0 5.1 36 860-895 18-53 (209)
305 1xdi_A RV3303C-LPDA; reductase 87.6 0.48 1.6E-05 58.4 5.8 37 861-897 182-218 (499)
306 3ces_A MNMG, tRNA uridine 5-ca 87.6 8.1 0.00028 49.5 17.0 42 1112-1162 139-180 (651)
307 1mo9_A ORF3; nucleotide bindin 87.5 0.45 1.5E-05 59.1 5.6 36 862-897 215-250 (523)
308 2x8g_A Thioredoxin glutathione 87.5 0.38 1.3E-05 60.7 5.0 33 861-893 286-318 (598)
309 1hyu_A AHPF, alkyl hydroperoxi 87.5 0.35 1.2E-05 60.2 4.5 35 861-895 355-389 (521)
310 2y0c_A BCEC, UDP-glucose dehyd 87.4 0.4 1.4E-05 59.2 5.0 36 859-894 6-41 (478)
311 3ab1_A Ferredoxin--NADP reduct 87.4 0.36 1.2E-05 56.3 4.3 36 861-896 163-198 (360)
312 2vdc_G Glutamate synthase [NAD 87.3 0.48 1.6E-05 58.1 5.6 38 859-896 262-300 (456)
313 3f8d_A Thioredoxin reductase ( 87.3 0.47 1.6E-05 53.7 5.1 36 861-896 154-189 (323)
314 3p2y_A Alanine dehydrogenase/p 87.2 0.41 1.4E-05 57.4 4.7 35 860-894 183-217 (381)
315 3hwr_A 2-dehydropantoate 2-red 87.1 0.42 1.4E-05 55.7 4.7 34 860-894 18-51 (318)
316 3k6j_A Protein F01G10.3, confi 87.0 0.49 1.7E-05 58.2 5.4 37 859-895 52-88 (460)
317 1lld_A L-lactate dehydrogenase 86.8 0.47 1.6E-05 54.9 4.9 34 861-894 7-42 (319)
318 3r9u_A Thioredoxin reductase; 86.7 0.5 1.7E-05 53.4 4.9 35 861-895 147-181 (315)
319 3dgz_A Thioredoxin reductase 2 86.7 0.55 1.9E-05 57.7 5.7 33 861-893 185-217 (488)
320 3ghy_A Ketopantoate reductase 86.6 0.53 1.8E-05 55.1 5.1 33 861-893 3-35 (335)
321 3g17_A Similar to 2-dehydropan 86.5 0.38 1.3E-05 55.3 3.8 33 861-893 2-34 (294)
322 2zxi_A TRNA uridine 5-carboxym 86.4 10 0.00036 48.3 17.1 41 1112-1161 138-178 (637)
323 3gg2_A Sugar dehydrogenase, UD 86.4 0.48 1.6E-05 58.1 4.9 34 862-895 3-36 (450)
324 1x13_A NAD(P) transhydrogenase 86.4 0.56 1.9E-05 56.7 5.3 35 860-894 171-205 (401)
325 3qfa_A Thioredoxin reductase 1 86.3 0.59 2E-05 58.1 5.7 33 861-893 210-242 (519)
326 1pqv_S STP-alpha, transcriptio 86.3 0.51 1.7E-05 55.1 4.7 59 1469-1528 23-82 (309)
327 1kyq_A Met8P, siroheme biosynt 86.0 0.38 1.3E-05 55.2 3.5 36 859-894 11-46 (274)
328 3iwa_A FAD-dependent pyridine 85.9 0.56 1.9E-05 57.3 5.1 37 860-896 158-195 (472)
329 1zcj_A Peroxisomal bifunctiona 85.8 0.56 1.9E-05 57.7 5.1 35 860-894 36-70 (463)
330 3pef_A 6-phosphogluconate dehy 85.8 0.63 2.2E-05 53.1 5.2 34 862-895 2-35 (287)
331 3dtt_A NADP oxidoreductase; st 85.6 0.6 2E-05 52.2 4.8 37 859-895 17-53 (245)
332 1z82_A Glycerol-3-phosphate de 85.6 0.62 2.1E-05 54.4 5.1 35 859-893 12-46 (335)
333 1l7d_A Nicotinamide nucleotide 85.6 0.67 2.3E-05 55.5 5.4 35 860-894 171-205 (384)
334 3ego_A Probable 2-dehydropanto 85.6 0.56 1.9E-05 54.3 4.7 33 861-894 2-34 (307)
335 4dna_A Probable glutathione re 85.4 0.67 2.3E-05 56.5 5.5 36 861-896 170-205 (463)
336 2xag_A Lysine-specific histone 85.3 0.055 1.9E-06 71.4 -4.5 63 781-844 191-259 (852)
337 1bg6_A N-(1-D-carboxylethyl)-L 85.3 0.61 2.1E-05 54.5 4.9 33 862-894 5-37 (359)
338 3lzw_A Ferredoxin--NADP reduct 85.3 0.59 2E-05 53.2 4.6 36 861-896 154-189 (332)
339 3k96_A Glycerol-3-phosphate de 85.2 0.61 2.1E-05 55.5 4.7 34 861-894 29-62 (356)
340 1pzg_A LDH, lactate dehydrogen 85.1 0.73 2.5E-05 54.2 5.4 34 861-894 9-43 (331)
341 3oj0_A Glutr, glutamyl-tRNA re 85.1 0.3 1E-05 49.8 1.9 34 861-894 21-54 (144)
342 2hjr_A Malate dehydrogenase; m 85.0 0.75 2.6E-05 54.0 5.4 34 861-894 14-48 (328)
343 3o0h_A Glutathione reductase; 85.0 0.71 2.4E-05 56.6 5.5 36 861-896 191-226 (484)
344 4ffl_A PYLC; amino acid, biosy 84.7 0.73 2.5E-05 54.2 5.2 35 861-895 1-35 (363)
345 3g0o_A 3-hydroxyisobutyrate de 84.7 0.69 2.4E-05 53.3 4.9 35 860-894 6-40 (303)
346 3g79_A NDP-N-acetyl-D-galactos 84.6 0.66 2.3E-05 57.3 4.9 36 860-895 17-54 (478)
347 3dgh_A TRXR-1, thioredoxin red 84.6 0.81 2.8E-05 56.1 5.7 33 861-893 187-219 (483)
348 1pjc_A Protein (L-alanine dehy 84.5 0.7 2.4E-05 54.9 4.9 34 861-894 167-200 (361)
349 1txg_A Glycerol-3-phosphate de 84.5 0.6 2E-05 54.1 4.2 31 862-892 1-31 (335)
350 2ewd_A Lactate dehydrogenase,; 84.5 0.77 2.6E-05 53.4 5.1 34 861-894 4-38 (317)
351 1cjc_A Protein (adrenodoxin re 84.4 0.71 2.4E-05 56.6 5.0 94 1316-1413 360-456 (460)
352 4dll_A 2-hydroxy-3-oxopropiona 84.3 0.7 2.4E-05 53.8 4.7 35 860-894 30-64 (320)
353 4a7p_A UDP-glucose dehydrogena 84.1 0.83 2.8E-05 56.0 5.4 37 859-895 6-42 (446)
354 3pdu_A 3-hydroxyisobutyrate de 84.0 0.63 2.2E-05 53.1 4.1 34 862-895 2-35 (287)
355 1m6i_A Programmed cell death p 83.9 0.79 2.7E-05 56.5 5.2 41 1112-1161 240-280 (493)
356 2vns_A Metalloreductase steap3 83.8 0.86 2.9E-05 50.0 4.9 35 860-894 27-61 (215)
357 1mv8_A GMD, GDP-mannose 6-dehy 83.5 0.65 2.2E-05 56.5 4.2 33 862-894 1-33 (436)
358 2h78_A Hibadh, 3-hydroxyisobut 83.5 0.72 2.5E-05 52.9 4.3 34 861-894 3-36 (302)
359 2v6b_A L-LDH, L-lactate dehydr 83.3 0.88 3E-05 52.8 4.9 33 862-894 1-35 (304)
360 3fbs_A Oxidoreductase; structu 83.3 0.64 2.2E-05 52.0 3.7 33 861-894 141-173 (297)
361 2qrj_A Saccharopine dehydrogen 83.2 0.98 3.3E-05 54.4 5.3 41 860-900 213-258 (394)
362 3qha_A Putative oxidoreductase 83.1 0.69 2.4E-05 53.2 3.9 35 861-895 15-49 (296)
363 2eez_A Alanine dehydrogenase; 83.0 0.88 3E-05 54.2 4.9 35 860-894 165-199 (369)
364 1nyt_A Shikimate 5-dehydrogena 82.9 1 3.5E-05 51.2 5.2 35 860-894 118-152 (271)
365 3mog_A Probable 3-hydroxybutyr 82.2 0.91 3.1E-05 56.2 4.7 35 861-895 5-39 (483)
366 2vhw_A Alanine dehydrogenase; 82.0 1 3.4E-05 53.9 4.9 35 860-894 167-201 (377)
367 3vtf_A UDP-glucose 6-dehydroge 82.0 1.1 3.7E-05 54.9 5.2 37 859-895 19-55 (444)
368 1t2d_A LDH-P, L-lactate dehydr 82.0 1.2 4.1E-05 52.2 5.5 34 861-894 4-38 (322)
369 2wtb_A MFP2, fatty acid multif 81.7 1 3.5E-05 58.5 5.1 35 860-894 311-345 (725)
370 4ezb_A Uncharacterized conserv 81.6 1.1 3.8E-05 52.2 5.0 35 860-894 23-58 (317)
371 1guz_A Malate dehydrogenase; o 81.5 1.2 4.1E-05 51.8 5.1 33 862-894 1-35 (310)
372 3pid_A UDP-glucose 6-dehydroge 81.4 0.97 3.3E-05 55.1 4.5 35 860-895 35-69 (432)
373 3l6d_A Putative oxidoreductase 81.3 1.2 4E-05 51.6 5.0 35 860-894 8-42 (306)
374 3tl2_A Malate dehydrogenase; c 81.1 1.3 4.4E-05 51.8 5.3 33 861-893 8-41 (315)
375 2qyt_A 2-dehydropantoate 2-red 81.0 0.85 2.9E-05 52.2 3.7 31 862-892 9-45 (317)
376 1ur5_A Malate dehydrogenase; o 81.0 1.3 4.5E-05 51.4 5.3 34 861-894 2-36 (309)
377 4a9w_A Monooxygenase; baeyer-v 80.9 1 3.5E-05 51.6 4.3 33 860-893 162-194 (357)
378 1yj8_A Glycerol-3-phosphate de 80.6 0.55 1.9E-05 55.8 2.0 36 860-895 20-62 (375)
379 4huj_A Uncharacterized protein 80.6 0.9 3.1E-05 49.9 3.5 34 861-894 23-57 (220)
380 1o94_A Tmadh, trimethylamine d 80.6 1.1 3.8E-05 58.1 4.9 35 860-894 527-563 (729)
381 2uyy_A N-PAC protein; long-cha 80.5 1.4 4.9E-05 50.7 5.3 34 861-894 30-63 (316)
382 1jay_A Coenzyme F420H2:NADP+ o 80.5 1.2 3.9E-05 48.2 4.3 33 862-894 1-34 (212)
383 1dlj_A UDP-glucose dehydrogena 80.4 0.9 3.1E-05 54.8 3.7 32 862-894 1-32 (402)
384 2a9f_A Putative malic enzyme ( 80.4 1 3.5E-05 54.1 4.1 36 859-894 186-222 (398)
385 4e21_A 6-phosphogluconate dehy 80.1 1.3 4.4E-05 52.7 4.9 34 861-894 22-55 (358)
386 3phh_A Shikimate dehydrogenase 80.1 1.5 5.2E-05 50.2 5.3 34 861-894 118-151 (269)
387 3l5a_A NADH/flavin oxidoreduct 80.0 0.3 1E-05 59.4 -0.6 60 787-848 305-379 (419)
388 1jw9_B Molybdopterin biosynthe 79.9 1.2 4.2E-05 50.1 4.4 33 861-893 31-64 (249)
389 2f1k_A Prephenate dehydrogenas 79.8 1.3 4.6E-05 49.9 4.7 32 862-893 1-32 (279)
390 1yqg_A Pyrroline-5-carboxylate 79.7 1.2 4E-05 49.9 4.2 32 862-893 1-33 (263)
391 3gvi_A Malate dehydrogenase; N 79.6 1.6 5.6E-05 51.2 5.5 34 861-894 7-41 (324)
392 2egg_A AROE, shikimate 5-dehyd 79.5 1.4 4.9E-05 50.9 4.9 35 860-894 140-175 (297)
393 1p77_A Shikimate 5-dehydrogena 79.5 1.2 4E-05 50.9 4.1 35 860-894 118-152 (272)
394 1evy_A Glycerol-3-phosphate de 79.5 0.78 2.7E-05 54.1 2.7 32 863-894 17-48 (366)
395 2rir_A Dipicolinate synthase, 79.4 1.5 5.2E-05 50.4 5.1 36 859-894 155-190 (300)
396 3qsg_A NAD-binding phosphogluc 79.3 1.2 4.3E-05 51.5 4.3 34 860-893 23-57 (312)
397 2gag_A Heterotetrameric sarcos 79.3 0.79 2.7E-05 61.4 3.0 37 861-897 284-320 (965)
398 2g5c_A Prephenate dehydrogenas 79.2 1.5 5.1E-05 49.6 4.9 33 862-894 2-36 (281)
399 1lqt_A FPRA; NADP+ derivative, 79.2 1.4 4.7E-05 54.0 4.9 94 1316-1413 352-452 (456)
400 1gte_A Dihydropyrimidine dehyd 79.1 1.5 5.2E-05 59.0 5.7 34 861-894 332-366 (1025)
401 1vl6_A Malate oxidoreductase; 79.0 1.3 4.6E-05 53.0 4.5 35 859-893 190-225 (388)
402 3d4o_A Dipicolinate synthase s 79.0 1.6 5.5E-05 50.1 5.1 36 859-894 153-188 (293)
403 3l9w_A Glutathione-regulated p 79.0 1.4 4.8E-05 53.4 4.8 35 861-895 4-38 (413)
404 1hyh_A L-hicdh, L-2-hydroxyiso 79.0 1.3 4.6E-05 51.2 4.5 33 862-894 2-36 (309)
405 3c24_A Putative oxidoreductase 78.9 1.7 5.8E-05 49.4 5.3 34 861-894 11-45 (286)
406 2pv7_A T-protein [includes: ch 78.9 1.6 5.6E-05 50.1 5.1 35 860-894 20-55 (298)
407 4g65_A TRK system potassium up 78.8 0.73 2.5E-05 56.6 2.3 36 860-895 2-37 (461)
408 2dkh_A 3-hydroxybenzoate hydro 78.7 44 0.0015 42.4 18.7 39 1316-1354 341-382 (639)
409 3ius_A Uncharacterized conserv 78.5 1.4 4.8E-05 49.4 4.4 35 860-894 4-38 (286)
410 1vpd_A Tartronate semialdehyde 78.4 1.3 4.6E-05 50.4 4.2 33 862-894 6-38 (299)
411 1a5z_A L-lactate dehydrogenase 78.3 1.4 4.8E-05 51.4 4.4 33 862-894 1-35 (319)
412 3c7a_A Octopine dehydrogenase; 78.2 0.99 3.4E-05 54.0 3.2 30 862-891 3-33 (404)
413 1wdk_A Fatty oxidation complex 78.1 1.4 4.9E-05 57.1 4.8 35 860-894 313-347 (715)
414 3ggo_A Prephenate dehydrogenas 78.0 1.7 5.9E-05 50.6 5.0 34 861-894 33-68 (314)
415 2gf2_A Hibadh, 3-hydroxyisobut 78.0 1.5 5.3E-05 49.8 4.5 33 862-894 1-33 (296)
416 3e8x_A Putative NAD-dependent 78.0 1.9 6.4E-05 47.1 5.1 37 859-895 19-56 (236)
417 3gt0_A Pyrroline-5-carboxylate 77.9 1.9 6.4E-05 48.1 5.1 34 861-894 2-39 (247)
418 1pjq_A CYSG, siroheme synthase 77.8 1.5 5.1E-05 53.8 4.6 35 859-893 10-44 (457)
419 2cvz_A Dehydrogenase, 3-hydrox 77.7 1.4 4.8E-05 49.8 4.0 32 862-894 2-33 (289)
420 3cky_A 2-hydroxymethyl glutara 77.6 1.5 5.3E-05 49.9 4.4 34 861-894 4-37 (301)
421 3gpi_A NAD-dependent epimerase 77.6 2.1 7.1E-05 48.2 5.4 34 861-894 3-36 (286)
422 1x0v_A GPD-C, GPDH-C, glycerol 77.5 1.1 3.7E-05 52.5 3.1 34 862-895 9-49 (354)
423 3k30_A Histamine dehydrogenase 77.4 1.6 5.6E-05 56.0 5.1 38 860-897 522-561 (690)
424 3ldh_A Lactate dehydrogenase; 77.4 2.1 7.2E-05 50.4 5.5 35 860-894 20-56 (330)
425 2o3j_A UDP-glucose 6-dehydroge 77.3 1.5 5.1E-05 54.2 4.4 34 861-894 9-44 (481)
426 3ond_A Adenosylhomocysteinase; 77.3 1.7 6E-05 53.6 5.0 36 859-894 263-298 (488)
427 3ew7_A LMO0794 protein; Q8Y8U8 77.3 2 6.8E-05 45.9 5.0 33 862-894 1-34 (221)
428 2p4q_A 6-phosphogluconate dehy 77.3 1.9 6.5E-05 53.5 5.4 36 859-894 8-43 (497)
429 1w4x_A Phenylacetone monooxyge 77.2 1.4 4.9E-05 54.9 4.3 35 860-894 185-219 (542)
430 4gbj_A 6-phosphogluconate dehy 76.8 1.5 5.1E-05 50.7 4.0 36 860-895 4-39 (297)
431 2i6t_A Ubiquitin-conjugating e 76.8 1.7 5.9E-05 50.5 4.5 36 860-895 13-50 (303)
432 2rcy_A Pyrroline carboxylate r 76.8 1.8 6.2E-05 48.3 4.6 34 862-895 5-42 (262)
433 1y6j_A L-lactate dehydrogenase 76.7 2 7E-05 50.1 5.1 34 861-894 7-42 (318)
434 1oju_A MDH, malate dehydrogena 76.5 1.6 5.4E-05 50.6 4.1 33 862-894 1-35 (294)
435 3pqe_A L-LDH, L-lactate dehydr 76.5 1.9 6.6E-05 50.6 4.9 35 860-894 4-40 (326)
436 3ktd_A Prephenate dehydrogenas 76.5 2.1 7.1E-05 50.6 5.2 35 860-894 7-41 (341)
437 3p7m_A Malate dehydrogenase; p 76.3 2.3 7.9E-05 49.8 5.5 34 861-894 5-39 (321)
438 2q3e_A UDP-glucose 6-dehydroge 76.1 1.6 5.3E-05 53.7 4.1 34 861-894 5-40 (467)
439 2zyd_A 6-phosphogluconate dehy 76.1 1.7 5.9E-05 53.6 4.5 35 860-894 14-48 (480)
440 4hv4_A UDP-N-acetylmuramate--L 76.0 1.5 5.2E-05 54.2 4.0 36 859-894 20-56 (494)
441 4g6h_A Rotenone-insensitive NA 76.0 1.7 5.7E-05 54.0 4.3 35 862-896 218-266 (502)
442 4gwg_A 6-phosphogluconate dehy 75.8 2.2 7.4E-05 52.8 5.3 35 861-895 4-38 (484)
443 2hk9_A Shikimate dehydrogenase 75.6 1.9 6.5E-05 49.1 4.4 34 861-894 129-162 (275)
444 3dfu_A Uncharacterized protein 75.6 0.92 3.1E-05 50.9 1.7 35 860-894 5-39 (232)
445 3h2s_A Putative NADH-flavin re 75.4 2.2 7.5E-05 45.9 4.6 33 862-894 1-34 (224)
446 2aef_A Calcium-gated potassium 75.3 1.2 4.2E-05 49.0 2.6 35 860-895 8-42 (234)
447 2qcu_A Aerobic glycerol-3-phos 75.0 25 0.00085 43.2 14.5 51 1104-1163 150-210 (501)
448 3zwc_A Peroxisomal bifunctiona 75.0 2.1 7.3E-05 55.6 5.1 36 859-894 314-349 (742)
449 3gvp_A Adenosylhomocysteinase 75.0 2.3 7.7E-05 51.8 5.0 36 859-894 218-253 (435)
450 1i36_A Conserved hypothetical 74.9 2 6.9E-05 48.0 4.3 30 863-892 2-31 (264)
451 1yb4_A Tartronic semialdehyde 74.9 1.6 5.3E-05 49.7 3.4 31 861-891 3-33 (295)
452 2izz_A Pyrroline-5-carboxylate 74.8 2.4 8.1E-05 49.4 5.0 33 861-893 22-58 (322)
453 1pgj_A 6PGDH, 6-PGDH, 6-phosph 74.7 2.1 7.3E-05 52.8 4.8 33 862-894 2-34 (478)
454 1np3_A Ketol-acid reductoisome 74.6 2.5 8.7E-05 49.6 5.2 33 861-893 16-48 (338)
455 2ahr_A Putative pyrroline carb 74.5 1.9 6.6E-05 48.1 4.0 33 861-893 3-35 (259)
456 4b4o_A Epimerase family protei 74.5 2.7 9.2E-05 47.6 5.3 33 862-894 1-34 (298)
457 2pgd_A 6-phosphogluconate dehy 74.5 2.4 8.1E-05 52.4 5.1 33 862-894 3-35 (482)
458 1hdo_A Biliverdin IX beta redu 74.4 2.7 9.2E-05 44.3 4.9 33 862-894 4-37 (206)
459 3don_A Shikimate dehydrogenase 74.3 1.9 6.6E-05 49.5 4.0 36 860-895 116-152 (277)
460 4aj2_A L-lactate dehydrogenase 74.3 2.9 0.0001 49.2 5.6 36 859-894 17-54 (331)
461 3vku_A L-LDH, L-lactate dehydr 74.2 2.2 7.6E-05 50.1 4.6 36 859-894 7-44 (326)
462 3ce6_A Adenosylhomocysteinase; 73.9 2.4 8.3E-05 52.5 5.0 36 859-894 272-307 (494)
463 3ojo_A CAP5O; rossmann fold, c 73.4 2 6.9E-05 52.4 4.1 36 860-895 10-45 (431)
464 1gpj_A Glutamyl-tRNA reductase 73.4 2.4 8.2E-05 51.1 4.7 35 860-894 166-201 (404)
465 3jyo_A Quinate/shikimate dehyd 73.4 3 0.0001 48.0 5.3 35 860-894 126-161 (283)
466 3tnl_A Shikimate dehydrogenase 73.2 2.9 9.8E-05 49.0 5.1 34 860-893 153-187 (315)
467 3nep_X Malate dehydrogenase; h 73.2 2.4 8.1E-05 49.6 4.4 33 862-894 1-35 (314)
468 3pwz_A Shikimate dehydrogenase 73.1 3 0.0001 47.7 5.2 35 860-894 119-154 (272)
469 3d1l_A Putative NADP oxidoredu 72.9 2.3 7.9E-05 47.7 4.2 34 861-894 10-44 (266)
470 1edz_A 5,10-methylenetetrahydr 72.9 2.4 8.2E-05 49.7 4.4 35 859-893 175-210 (320)
471 3tri_A Pyrroline-5-carboxylate 72.8 3.4 0.00011 47.2 5.5 34 861-894 3-39 (280)
472 3vps_A TUNA, NAD-dependent epi 72.7 3.2 0.00011 47.0 5.3 36 860-895 6-42 (321)
473 1nvt_A Shikimate 5'-dehydrogen 72.7 2.3 7.7E-05 48.8 4.1 34 860-894 127-160 (287)
474 1ldn_A L-lactate dehydrogenase 72.6 2.9 9.9E-05 48.7 5.0 35 860-894 5-41 (316)
475 3dhn_A NAD-dependent epimerase 72.1 2.7 9.2E-05 45.4 4.3 35 861-895 4-39 (227)
476 1leh_A Leucine dehydrogenase; 72.0 3.2 0.00011 49.6 5.2 35 859-893 171-205 (364)
477 3fbt_A Chorismate mutase and s 71.6 2.9 9.9E-05 48.2 4.6 35 860-894 121-156 (282)
478 3o8q_A Shikimate 5-dehydrogena 71.5 3.1 0.00011 47.9 4.8 35 860-894 125-160 (281)
479 3u62_A Shikimate dehydrogenase 71.3 3.4 0.00012 46.8 5.0 32 863-894 110-142 (253)
480 2d5c_A AROE, shikimate 5-dehyd 71.2 3.5 0.00012 46.4 5.1 32 863-894 118-149 (263)
481 2dbq_A Glyoxylate reductase; D 71.1 3.6 0.00012 48.3 5.4 37 859-895 148-184 (334)
482 3fi9_A Malate dehydrogenase; s 70.9 3.4 0.00012 48.9 5.1 34 861-894 8-44 (343)
483 1lu9_A Methylene tetrahydromet 70.6 3.6 0.00012 46.9 5.1 34 860-893 118-152 (287)
484 4fk1_A Putative thioredoxin re 70.4 3.2 0.00011 47.1 4.7 34 861-894 146-180 (304)
485 3kru_A NADH:flavin oxidoreduct 70.4 0.46 1.6E-05 56.3 -2.4 55 784-838 263-321 (343)
486 3obb_A Probable 3-hydroxyisobu 70.3 2.9 0.0001 48.4 4.3 34 861-894 3-36 (300)
487 3q2o_A Phosphoribosylaminoimid 70.3 4.2 0.00014 48.3 5.9 36 859-894 12-47 (389)
488 4id9_A Short-chain dehydrogena 70.0 3.4 0.00012 47.6 4.9 38 858-895 16-54 (347)
489 3h9u_A Adenosylhomocysteinase; 69.9 3.5 0.00012 50.2 5.0 35 860-894 210-244 (436)
490 2iz1_A 6-phosphogluconate dehy 69.8 3.2 0.00011 51.1 4.8 33 862-894 6-38 (474)
491 3t4e_A Quinate/shikimate dehyd 69.4 3.9 0.00013 47.8 5.1 34 860-893 147-181 (312)
492 2dkn_A 3-alpha-hydroxysteroid 68.7 4.3 0.00015 44.3 5.1 33 862-894 2-35 (255)
493 2ydy_A Methionine adenosyltran 68.7 3.7 0.00013 46.6 4.7 34 861-894 2-36 (315)
494 3b1f_A Putative prephenate deh 68.6 3.4 0.00012 46.8 4.4 33 861-893 6-40 (290)
495 3r6d_A NAD-dependent epimerase 68.5 4.6 0.00016 43.5 5.2 35 861-895 5-41 (221)
496 3d0o_A L-LDH 1, L-lactate dehy 68.4 3.6 0.00012 48.0 4.5 33 861-893 6-40 (317)
497 1npy_A Hypothetical shikimate 68.3 3.9 0.00013 46.7 4.7 33 861-893 119-152 (271)
498 1zud_1 Adenylyltransferase THI 68.3 3.8 0.00013 46.2 4.5 34 860-893 27-61 (251)
499 3n58_A Adenosylhomocysteinase; 67.7 4.1 0.00014 49.8 5.0 36 859-894 245-280 (464)
500 2gcg_A Glyoxylate reductase/hy 67.7 3.8 0.00013 48.0 4.6 36 859-894 153-188 (330)
No 1
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=2.8e-62 Score=625.95 Aligned_cols=571 Identities=39% Similarity=0.646 Sum_probs=439.5
Q ss_pred ccccccceeccCcccccCchhhcchhHHHhcCCCc-cchhhhhhHHHHhhcCCCccCCcccccCCCCCCCCCCCChhhHH
Q 046008 605 ENTGAAAVAVGLKARAAGPIERIKFKEILKRRGGL-QEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRASLI 683 (1624)
Q Consensus 605 ~~~~~aa~~~~l~~~~~~~~e~~~~~~~~~~~~~~-~~~l~~rn~~l~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 683 (1624)
.++|+||+++||++++|+++|..+|||++++.+.. ..||+|||+||+||.+||...++.+.|.++...+.+ .....|
T Consensus 1 ~~~~~aa~~~~l~~~~l~~~E~~~~~~~~~~~~~~~~~yl~irn~~~~~w~~~~~~~~~~~~~~~~~~r~~~--~~~~~i 78 (662)
T 2z3y_A 1 SGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYN--SDTVLV 78 (662)
T ss_dssp CHHHHHHHHTTCCTTSCCHHHHHHCHHHHTSCHHHHHHHHHHHHHHHHHHHTCTTBCCCHHHHHHHSCTTGG--GCHHHH
T ss_pred ChHHHHHHHcCCCCCCCCHHHHHHhHHHHcCchHHHHHHHHHHHHHHHHHHHCCCcccCHHHHHHhcCCCcc--CChHHH
Confidence 36899999999999999999999999999997655 489999999999999999999999999988876655 344689
Q ss_pred HHHHHhhcccCceeeecCCCCcccCCCCcchhhHHhhhhhccccCCcccccccceeeeecccccccccccccCccccCCC
Q 046008 684 REIYKFLDQSGYINVGIASTKEKADHNAKHSYKLLKEERLEKSSGASIADSEDGVAFILGQIKSSETTTEAKHGVECNDG 763 (1624)
Q Consensus 684 ~~~~~~l~~~g~in~g~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (1624)
+.++.|+.++|+||+|+..+. .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------------~--- 100 (662)
T 2z3y_A 79 HRVHSYLERHGLINFGIYKRI-------------------------------------------------------K--- 100 (662)
T ss_dssp HHHHHHHHHTTSSSCSSCBCS-------------------------------------------------------S---
T ss_pred HHHHHHHHHHHHHhcCCcccc-------------------------------------------------------C---
Confidence 999999999999998874211 0
Q ss_pred CcccccccCCCCCCCCCchhhhhhhhhhhhccccCCCccccccccccccccCCCCccccccCCCcCChhcccccchhhhh
Q 046008 764 NQQIGIKTGGSMTPELPNEIRQKESVVDDCQQRVDSDPKASNRLVGVDVSCDDPSCGMVDGGTVPLTIEERSESERVQSA 843 (1624)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~d~~~~~~~c~~v~~~r~~l~p~~~~~~~~~~~~ 843 (1624)
|
T Consensus 101 ------------------------------------~------------------------------------------- 101 (662)
T 2z3y_A 101 ------------------------------------P------------------------------------------- 101 (662)
T ss_dssp ------------------------------------C-------------------------------------------
T ss_pred ------------------------------------C-------------------------------------------
Confidence 0
Q ss_pred hhhhcCCCCccccCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeeccccc
Q 046008 844 SCDDAGENHYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEA 923 (1624)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~ 923 (1624)
.+....++|+|||||++||+||++|+++|++|+|||+++++||+++++.. .++.+|+|++|+++...
T Consensus 102 ------------~~~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~-~~~~~~~G~~~~~~~~~ 168 (662)
T 2z3y_A 102 ------------LPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK-GNYVADLGAMVVTGLGG 168 (662)
T ss_dssp ------------CCSSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEE-TTEEEESSCCEECCSBT
T ss_pred ------------CcccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc-cCchhhcCcEEEeCCCC
Confidence 00123578999999999999999999999999999999999999999886 48899999999987632
Q ss_pred chhhhccCCcHHHHHHHhCCceeeecCCCCeeeccCCcccCcchHHHHHHHHHHHHHHHHHHHHHhhh---hhhhccHHH
Q 046008 924 DVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGE---HAMKMSLED 1000 (1624)
Q Consensus 924 ~v~~~~~~nPl~~LlkeLGLel~~l~~~~~~yd~~~Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~---~a~~~sled 1000 (1624)
+++..+.+++|+++..+...+..|. .+|..++..........+..++..+..+...... .....++.+
T Consensus 169 --------~~~~~l~~~l~~~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (662)
T 2z3y_A 169 --------NPMAVVSKQVNMELAKIKQKCPLYE-ANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQ 239 (662)
T ss_dssp --------CHHHHHHHHHTCCEEECCSCCCEEC-TTSCBCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCEETTEECBHHH
T ss_pred --------chHHHHHHHhCcchhcccccceEEe-CCCcCCCcchhhhhhHHHHHHHHHHHHHHhcccccccCCCCCCHHH
Confidence 5677899999998776655554444 4666666554444444555544444322211000 000111222
Q ss_pred HHHHHH----------------H--------------H----HHHhhccCCccccc-----ccc---------------h
Q 046008 1001 GLEYAL----------------K--------------R----RRMARLGRGREDAS-----MHN---------------S 1026 (1624)
Q Consensus 1001 ~Le~~l----------------k--------------~----~r~~~~~~~~~~~~-----~~~---------------a 1026 (1624)
.++... . . ..+......+..+. ... .
T Consensus 240 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~s~~~~~~~l~~~ 319 (662)
T 2z3y_A 240 ALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTAL 319 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCC--------CCTHHHHHHHHHHHHTTT
T ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhcchhhhHHHHhhhhhhhhhcccccccchhhhhhhhhhhHHHH
Confidence 111100 0 0 00000000000000 000 0
Q ss_pred hhHhhcc-----------cCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCCcc
Q 046008 1027 MDVYSKT-----------SSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAH 1095 (1624)
Q Consensus 1027 ~d~fs~~-----------~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~g~~G~~ 1095 (1624)
...|... ..+... .....++++..+.+++|++.+++++++..+..+++..|.++..| .+.|.+
T Consensus 320 ~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~~~~-~~~g~~ 393 (662)
T 2z3y_A 320 CKEYDELAETQGKLEEKLQELEAN-----PPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDF-EFTGSH 393 (662)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHTTS-----CCCSCSSCHHHHHHHHHHHHHHHHHTTSCGGGBBTTTTTTTGGG-CCBSCC
T ss_pred HhhhhhhhhhhhhHHHHHHHhhcc-----CcccccccHHHHHHHHHHHHHHHHhcCCChhhcCHhhcCCCccc-ccCCce
Confidence 0000000 000000 00112367888899999999999988889999999888766444 356788
Q ss_pred ccccchHHHHHHHHhhhccccccceEEEEEecCCCCCCCCCCCcEEEEeCC------CcEEEcCEEEEccChhhhhh--h
Q 046008 1096 CMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSN------GSEFSGDAVLITVPLGCLKA--E 1167 (1624)
Q Consensus 1096 ~~VkGGm~sLveALAe~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~Tad------Geti~AD~VIsAiP~~vLk~--~ 1167 (1624)
+.++|||++|+++|+++++|++|++|++|.+. +++|.|++.+ |.++.||+||+|+|+++|+. .
T Consensus 394 ~~~~gG~~~l~~~La~~l~I~l~~~V~~I~~~---------~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~ 464 (662)
T 2z3y_A 394 LTVRNGYSCVPVALAEGLDIKLNTAVRQVRYT---------ASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 464 (662)
T ss_dssp EEETTCTTHHHHHHTTTCEEETTEEEEEEEEE---------TTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred eeecCcHHHHHHHHHhcCceecCCeEEEEEEC---------CCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccC
Confidence 99999999999999999999999999999983 5578888766 67899999999999999986 4
Q ss_pred cccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEeccccCCCCcEEEEEEeCccc
Q 046008 1168 SIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAA 1247 (1624)
Q Consensus 1168 ~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~n~~ap~G~~vLvayv~G~~A 1247 (1624)
.|.|.|+||+++.++|++++|++++||+|.|+++||+.+..+||........++.++++|+.. +.++|++|+.|..+
T Consensus 465 ~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~---~~~vL~~~~~G~~a 541 (662)
T 2z3y_A 465 AVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAA 541 (662)
T ss_dssp SSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS---SSSEEEEEECTHHH
T ss_pred ceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCC---CCCEEEEEeccHhH
Confidence 578999999999999999999999999999999999987778887654444556677888764 56799999999999
Q ss_pred cccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccCCCCCCchhhhhCCccC-----------
Q 046008 1248 VDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVE----------- 1316 (1624)
Q Consensus 1248 ~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~~~~~d~L~tPV~----------- 1316 (1624)
..+..++++++++.++++|+++||....++|..+.+++|.++||++|+|++++||+...+++.+++|+.
T Consensus 542 ~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~ 621 (662)
T 2z3y_A 542 GIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQP 621 (662)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------C
T ss_pred HHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCC
Confidence 999999999999999999999999876789999999999999999999999999998888888888873
Q ss_pred -CeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHcc
Q 046008 1317 -NCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTT 1354 (1624)
Q Consensus 1317 -grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~ 1354 (1624)
+|||||||||+..|+||||||+.||+|||.+|+..+.+
T Consensus 622 ~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~g 660 (662)
T 2z3y_A 622 IPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 660 (662)
T ss_dssp CCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHccC
Confidence 46999999999989999999999999999999999874
No 2
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=1.3e-59 Score=611.51 Aligned_cols=579 Identities=38% Similarity=0.636 Sum_probs=437.2
Q ss_pred cccccccccceeccCcccccCchhhcchhHHHhc-CCCccchhhhhhHHHHhhcCCCccCCcccccCCCCCCCCCCCChh
Q 046008 602 TEAENTGAAAVAVGLKARAAGPIERIKFKEILKR-RGGLQEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRA 680 (1624)
Q Consensus 602 ~~~~~~~~aa~~~~l~~~~~~~~e~~~~~~~~~~-~~~~~~~l~~rn~~l~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~ 680 (1624)
+...++++||+.+||+++.++++|+.+|++++++ ++.+..||.+||+||.+|.+||...+....|.++...+.. ...
T Consensus 169 ~~~~~~~~aa~~~r~p~~~~~~~e~~~f~~~~~~~~~~~~~~~~~rn~i~~~w~~~P~~a~~~~~~~~~~~r~~~--~~p 246 (852)
T 2xag_A 169 EEPSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYN--SDT 246 (852)
T ss_dssp --CCSHHHHHHTTTCCTTSCCHHHHHHCHHHHTSCHHHHHHHHHHHHHHHHHHHTCTTBCCCHHHHHHHCCTTTT--SCH
T ss_pred cchHHHHHHHHHhcCCCcccChHHHHHHHHHHHhhhhhcCeeeEeecchhHHHhcCCHHHhhHHHHHHhCCCccc--CCc
Confidence 3477899999999999999999999999999999 5777899999999999999999999888888888876655 345
Q ss_pred hHHHHHHHhhcccCceeeecCCCCcccCCCCcchhhHHhhhhhccccCCcccccccceeeeecccccccccccccCcccc
Q 046008 681 SLIREIYKFLDQSGYINVGIASTKEKADHNAKHSYKLLKEERLEKSSGASIADSEDGVAFILGQIKSSETTTEAKHGVEC 760 (1624)
Q Consensus 681 ~l~~~~~~~l~~~g~in~g~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 760 (1624)
.+|+.++.|+.++|+||+|+..+. .
T Consensus 247 ~~i~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------------~ 271 (852)
T 2xag_A 247 VLVHRVHSYLERHGLINFGIYKRI-------------------------------------------------------K 271 (852)
T ss_dssp HHHHHHHHHHHHTTSSSCSSCBCS-------------------------------------------------------S
T ss_pred HHHHHHHHHHHHHHHHhcCccccc-------------------------------------------------------C
Confidence 699999999999999998873210 0
Q ss_pred CCCCcccccccCCCCCCCCCchhhhhhhhhhhhccccCCCccccccccccccccCCCCccccccCCCcCChhcccccchh
Q 046008 761 NDGNQQIGIKTGGSMTPELPNEIRQKESVVDDCQQRVDSDPKASNRLVGVDVSCDDPSCGMVDGGTVPLTIEERSESERV 840 (1624)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~d~~~~~~~c~~v~~~r~~l~p~~~~~~~~~ 840 (1624)
+
T Consensus 272 ---------------------------------------~---------------------------------------- 272 (852)
T 2xag_A 272 ---------------------------------------P---------------------------------------- 272 (852)
T ss_dssp ---------------------------------------C----------------------------------------
T ss_pred ---------------------------------------C----------------------------------------
Confidence 0
Q ss_pred hhhhhhhcCCCCccccCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeecc
Q 046008 841 QSASCDDAGENHYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITG 920 (1624)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g 920 (1624)
.+....++|+|||||++||+||++|+++|++|+|||+++++||+++++.. .++.+|+|++|+++
T Consensus 273 ---------------~~~~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~~~~~~~G~~~~~~ 336 (852)
T 2xag_A 273 ---------------LPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK-GNYVADLGAMVVTG 336 (852)
T ss_dssp ---------------CCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEE-TTEEEESSCCEECC
T ss_pred ---------------cccCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeecc-cccchhcCceEecC
Confidence 00123578999999999999999999999999999999999999999887 48899999999987
Q ss_pred cccchhhhccCCcHHHHHHHhCCceeeecCCCCeeeccCCcccCcchHHHHHHHHHHHHHHHHHHHHHhhhh---hhhcc
Q 046008 921 VEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEH---AMKMS 997 (1624)
Q Consensus 921 ~~~~v~~~~~~nPl~~LlkeLGLel~~l~~~~~~yd~~~Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~~---a~~~s 997 (1624)
... +++..+.++||++...+...+.+|. ..|..++..........+..++..+..+....... ....+
T Consensus 337 ~~~--------~~~~~l~~~lg~~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~s 407 (852)
T 2xag_A 337 LGG--------NPMAVVSKQVNMELAKIKQKCPLYE-ANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVS 407 (852)
T ss_dssp SBT--------CHHHHHHHHTTCCEEECCCCCCEEC-TTSCBCCHHHHHHHHHHHHHHHHHHHHHHHTSCCCEETTEECB
T ss_pred CCC--------chHHHHHHHhCCchhhccccceEEe-cCCccccchhhhhhhhhhhhhHHHHHHHhhhhhhhcccCCCcc
Confidence 532 5677899999998776655554443 46666665544444444444444332222110000 00011
Q ss_pred HHHHHHH----------------HH--------------HH-------HHHh-------hccCCcc---ccc----ccch
Q 046008 998 LEDGLEY----------------AL--------------KR-------RRMA-------RLGRGRE---DAS----MHNS 1026 (1624)
Q Consensus 998 led~Le~----------------~l--------------k~-------~r~~-------~~~~~~~---~~~----~~~a 1026 (1624)
+...++. .. .. ..+. ....... .+. ...+
T Consensus 408 lg~~~e~v~~~~er~~~~e~l~~~~~i~~~~~~i~~~~~~l~~~~~~l~~l~~~~~~~~~~~~p~~~~~e~s~rs~~~~l 487 (852)
T 2xag_A 408 LGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDL 487 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhhhcchhHHHHhhhhhhhhhhhhhhHHHHHHhHHHHHHHHHHHhhhhcccccccchhhhhhhhhhhhH
Confidence 1111110 00 00 0000 0000000 000 0000
Q ss_pred hhHhhcccC-------CCCCCC--CcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCCcccc
Q 046008 1027 MDVYSKTSS-------VDSRVP--DKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCM 1097 (1624)
Q Consensus 1027 ~d~fs~~~~-------i~~~~p--~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~g~~G~~~~ 1097 (1624)
.+.+..+.. +...+. ........++++..+.++.|++.+++++++..+..+++.+|.++..| .+.|.+++
T Consensus 488 ~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~~ls~~~~~~l~~~~~~~e~~~~~~l~~lSl~~~~~~~~~-~~~g~~~~ 566 (852)
T 2xag_A 488 TALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDF-EFTGSHLT 566 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHSCCCSCSSCTTHHHHHHHHHHHHHHHHTSCTTTBBTTTTTGGGGG-CCBSCCEE
T ss_pred HHHHHHHhhhhhhhhhHHHHHHhhhccCcccccCCHHHHHHHHHHHhhhcccccCChHhhhhhhhhhcccc-ccCCceEE
Confidence 000000000 000000 00000112356777888999999888888888888999888776444 36678899
Q ss_pred ccchHHHHHHHHhhhccccccceEEEEEecCCCCCCCCCCCcEEEEeCC------CcEEEcCEEEEccChhhhhh--hcc
Q 046008 1098 IKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSN------GSEFSGDAVLITVPLGCLKA--ESI 1169 (1624)
Q Consensus 1098 VkGGm~sLveALAe~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~Tad------Geti~AD~VIsAiP~~vLk~--~~I 1169 (1624)
++|||+.|+++|++.++|+||++|++|.+. +++|.|++.+ |.+|.||+||+|+|+++|+. ..|
T Consensus 567 ~~gG~~~L~~aLa~~l~I~Lnt~V~~I~~~---------~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I 637 (852)
T 2xag_A 567 VRNGYSCVPVALAEGLDIKLNTAVRQVRYT---------ASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAV 637 (852)
T ss_dssp ETTCTTHHHHHHTTTCCEECSEEEEEEEEE---------TTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSS
T ss_pred ecCcHHHHHHHHHhCCCEEeCCeEEEEEEc---------CCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhccc
Confidence 999999999999999999999999999993 5578888765 57899999999999999986 457
Q ss_pred cCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEeccccCCCCcEEEEEEeCccccc
Q 046008 1170 MFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVD 1249 (1624)
Q Consensus 1170 ~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~n~~ap~G~~vLvayv~G~~A~~ 1249 (1624)
.|.|+||.++.++|++++|++++||+|.|+++||+.+..+||+.......++.++++|+.. +.++|++|+.|..+..
T Consensus 638 ~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~---~~pvLl~~v~G~~a~~ 714 (852)
T 2xag_A 638 QFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAAGI 714 (852)
T ss_dssp EEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECS---SSSEEEEEECHHHHHH
T ss_pred ccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCC---CCCEEEEEecCcCHHH
Confidence 8999999999999999999999999999999999987778887654444456667777764 4579999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccCCCCCCchhhhhCCccC------------C
Q 046008 1250 GQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVE------------N 1317 (1624)
Q Consensus 1250 ~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~~~~~d~L~tPV~------------g 1317 (1624)
+..++++++++.++++|+++||....++|..+.+++|.++||++|+|++++||+...+++.++.|+. +
T Consensus 715 l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~g 794 (852)
T 2xag_A 715 MENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIP 794 (852)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCC
T ss_pred HhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCCC
Confidence 9999999999999999999999876789999999999999999999999999998888888888863 4
Q ss_pred eEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHcc
Q 046008 1318 CLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTT 1354 (1624)
Q Consensus 1318 rLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~ 1354 (1624)
||||||+||+..|+||||||+.||+|||.+|+..+.+
T Consensus 795 rL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 795 RLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred cEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhC
Confidence 6999999999989999999999999999999999975
No 3
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=4.1e-55 Score=566.02 Aligned_cols=537 Identities=34% Similarity=0.597 Sum_probs=411.7
Q ss_pred eccCcccccCchhhcchhHHHhcCCCccchhhhhhHHHHhhcCCCccCCcccccCCCCCCCCCC-CChhhHHHHHHHhhc
Q 046008 613 AVGLKARAAGPIERIKFKEILKRRGGLQEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDE-PSRASLIREIYKFLD 691 (1624)
Q Consensus 613 ~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~l~~rn~~l~~w~~~~~~~l~~~~~~~~~~~~~~~-~~~~~l~~~~~~~l~ 691 (1624)
++=++++.|+++|..+|||+.+++ ..||+|||.||++|..||..+|+.+.|.....+...- ......++.|+.||.
T Consensus 235 a~~~~p~~~~~~e~~~fp~~~~~~---~~yl~irn~il~~w~~np~~~l~~~~~~~~~~~r~~~~i~~~~~~~~~~~~~~ 311 (776)
T 4gut_A 235 ALCVRPDVMELDELYEFPEYSRDP---TMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMT 311 (776)
T ss_dssp SSCBCTTSCCHHHHHHCGGGSSCC---HHHHHHHHHHHHHHHHCTTSCCCHHHHGGGCCCSSTHHHHHHHHHHHHHHHHH
T ss_pred chhcCCCcCChHHHHhChHHHhcC---ceeeeehHHHHHHHHHCCceeeeHHHhhhhcccccccccccHHHHHHHHHHHH
Confidence 334679999999999999999875 4799999999999999999999999997655553321 123457899999999
Q ss_pred ccCceeeecCCCCcccCCCCcchhhHHhhhhhccccCCcccccccceeeeecccccccccccccCccccCCCCccccccc
Q 046008 692 QSGYINVGIASTKEKADHNAKHSYKLLKEERLEKSSGASIADSEDGVAFILGQIKSSETTTEAKHGVECNDGNQQIGIKT 771 (1624)
Q Consensus 692 ~~g~in~g~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 (1624)
++||||+|+......
T Consensus 312 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 326 (776)
T 4gut_A 312 RKGLINTGVLSVGAD----------------------------------------------------------------- 326 (776)
T ss_dssp HHTSSSCTTCCCCGG-----------------------------------------------------------------
T ss_pred Hhhhhhccccccccc-----------------------------------------------------------------
Confidence 999999887631000
Q ss_pred CCCCCCCCCchhhhhhhhhhhhccccCCCccccccccccccccCCCCccccccCCCcCChhcccccchhhhhhhhhcCCC
Q 046008 772 GGSMTPELPNEIRQKESVVDDCQQRVDSDPKASNRLVGVDVSCDDPSCGMVDGGTVPLTIEERSESERVQSASCDDAGEN 851 (1624)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~d~~~~~~~c~~v~~~r~~l~p~~~~~~~~~~~~~~~~~~~~ 851 (1624)
. . +
T Consensus 327 --------------------~----~--~--------------------------------------------------- 329 (776)
T 4gut_A 327 --------------------Q----Y--L--------------------------------------------------- 329 (776)
T ss_dssp --------------------G----C--S---------------------------------------------------
T ss_pred --------------------c----c--C---------------------------------------------------
Confidence 0 0 0
Q ss_pred CccccCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccC
Q 046008 852 HYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRA 931 (1624)
Q Consensus 852 ~~~~~~~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~ 931 (1624)
.......++|+|||||++||+||+.|++.|++|+|||+++++||++++.....|+.+|+|++|+++...
T Consensus 330 ---~~~~~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~-------- 398 (776)
T 4gut_A 330 ---LPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCIN-------- 398 (776)
T ss_dssp ---SCGGGTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTT--------
T ss_pred ---CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCcc--------
Confidence 000112478999999999999999999999999999999999999999887678999999999987543
Q ss_pred CcHHHHHHHhCCceeeecCCCCeeeccCCcccCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHH
Q 046008 932 DPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRM 1011 (1624)
Q Consensus 932 nPl~~LlkeLGLel~~l~~~~~~yd~~~Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~ 1011 (1624)
+|+..+++++|++.........++. ..|..............+..+++.+..... ........++...+...+.
T Consensus 399 np~~~l~~~lGl~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~~~~~d~sl~~~~~~~~~---- 472 (776)
T 4gut_A 399 NPVALMCEQLGISMHKFGERCDLIQ-EGGRITDPTIDKRMDFHFNALLDVVSEWRK-DKTQLQDVPLGEKIEEIYK---- 472 (776)
T ss_dssp CHHHHHHHHHTCCCEECCSCCCEEC-TTSCBCCHHHHHHHHHHHHHHHHHHHHHGG-GCCGGGCCBHHHHHHHHHH----
T ss_pred ChHHHHHHHhCCcccccccccceEc-cCCcccchhHHHHHHHHHHHHHHHHHHHhh-cccccccccHHHHHHHHHH----
Confidence 6777899999998776555444443 344443322222222222222222211100 0001111222222111000
Q ss_pred hhccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccccccCCC
Q 046008 1012 ARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGF 1091 (1624)
Q Consensus 1012 ~~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~g~ 1091 (1624)
.++... .+ .........+.+.+..+++.++..+..+++..|.....|..+
T Consensus 473 ----------------~~l~~~-----gv---------~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~ 522 (776)
T 4gut_A 473 ----------------AFIKES-----GI---------QFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQF 522 (776)
T ss_dssp ----------------HHHHHS-----CC---------CCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCC
T ss_pred ----------------HHHHhc-----CC---------CccchhHHHHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhc
Confidence 000000 00 012223344455566667777788888888888766666667
Q ss_pred CCccccccchHHHHHHHHhhhccccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhhhhhhcccC
Q 046008 1092 GGAHCMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESIMF 1171 (1624)
Q Consensus 1092 ~G~~~~VkGGm~sLveALAe~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~vLk~~~I~F 1171 (1624)
+|.+..+.+|++.|+++|+++++|++|++|++|.. ++++|.|++.+|.++.||+||+|+|+++|+...+.|
T Consensus 523 ~G~~~~~~~G~~~l~~aLa~gl~I~l~t~V~~I~~---------~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f 593 (776)
T 4gut_A 523 AGDHTLLTPGYSVIIEKLAEGLDIQLKSPVQCIDY---------SGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQF 593 (776)
T ss_dssp CSCEEECTTCTHHHHHHHHTTSCEESSCCEEEEEC---------SSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEE
T ss_pred CCCeEEECChHHHHHHHHHhCCcEEcCCeeEEEEE---------cCCEEEEEECCCcEEEcCEEEECCCHHHHhhccccc
Confidence 88888999999999999999999999999999998 355799999999999999999999999998778899
Q ss_pred CCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCC---CccccccccccCCCCceeEEeccccCCCCcEEEEEEeCcccc
Q 046008 1172 SPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDT---VDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAV 1248 (1624)
Q Consensus 1172 ~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~---~~~fG~~~~~~~~rg~~~~~~n~~ap~G~~vLvayv~G~~A~ 1248 (1624)
.|+||+++.++|++++|++++||+|.|+++||+.. ..+||........++.+..+|+.....+.++|++|+.|..+.
T Consensus 594 ~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~ 673 (776)
T 4gut_A 594 NPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVA 673 (776)
T ss_dssp ESCCCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHH
T ss_pred CCCCCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHH
Confidence 99999999999999999999999999999999864 356666544334456667777765444567999999999998
Q ss_pred ccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccCCCCCCchhhhhCCccCCeEEEecCCccC
Q 046008 1249 DGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCK 1328 (1624)
Q Consensus 1249 ~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~~~~~d~L~tPV~grLyFAGEaTs~ 1328 (1624)
.+..++++++++.++++|+++||...+++|..+.+++|..+||++|+|+++.+|.....++.+.+|+.||||||||||+.
T Consensus 674 ~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~ 753 (776)
T 4gut_A 674 SVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNR 753 (776)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCS
T ss_pred HHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcC
Confidence 89999999999999999999999877889999999999999999999999999988888899999987779999999999
Q ss_pred CCCCcHHHHHHHHHHHHHHHHH
Q 046008 1329 EHPDTVGGAMLSGLREAVRIID 1350 (1624)
Q Consensus 1329 ~~~GtVEGAi~SGiRAA~~IL~ 1350 (1624)
.|+||||||+.||+|||.+|++
T Consensus 754 ~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 754 HFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp SSCSSHHHHHHHHHHHHHHHHC
T ss_pred CCCcCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999975
No 4
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=1.4e-44 Score=448.99 Aligned_cols=430 Identities=27% Similarity=0.351 Sum_probs=283.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHHH
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQG-FSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCA 939 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g-~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~Llk 939 (1624)
.++|+|||||++||+||++|+++| ++|+|||+++++||+++|.....|+.+|+|++|+++... +++..++.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~--------~~~~~~~~ 79 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLT--------NPLFLEEA 79 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTT--------CHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCC--------ChHHHHHH
Confidence 478999999999999999999999 999999999999999999875348999999999986532 45556777
Q ss_pred HhCCcee---eecCCCCeeec-cCCcccCcchHHHHHHHHHHHHHHHHHHHHH---hhhhhhhccHHHHHHHHHHHHHHh
Q 046008 940 QLGLELT---VLNSDCPLYDI-VSGQKVPANVDEALEAEFNSLLDDMVLLVAQ---KGEHAMKMSLEDGLEYALKRRRMA 1012 (1624)
Q Consensus 940 eLGLel~---~l~~~~~~yd~-~~Gk~vp~~l~~~l~~~~~slld~l~~~~~~---~g~~a~~~sled~Le~~lk~~r~~ 1012 (1624)
++|+... ....+...+.+ ..+..+.......+ ..++..+...... ........++.+++...+...
T Consensus 80 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~l~~~--- 152 (516)
T 1rsg_A 80 QLSLNDGRTRFVFDDDNFIYIDEERGRVDHDKELLL----EIVDNEMSKFAELEFHQHLGVSDCSFFQLVMKYLLQR--- 152 (516)
T ss_dssp HHHHHHCCCCEECCCCCCEEEETTTEECTTCTTTCH----HHHHHHHHHHHHHHC-------CCBHHHHHHHHHHHH---
T ss_pred HhCCCCcceeEEECCCCEEEEcCCCccccccHHHHH----HHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHh---
Confidence 7776311 11111111111 12222211111111 1111111111100 000011233344332211110
Q ss_pred hccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCC
Q 046008 1013 RLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFG 1092 (1624)
Q Consensus 1013 ~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~g~~ 1092 (1624)
...+.+....++...+.++...++..+..+++.++... ..
T Consensus 153 -----------------------------------~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~-----~~ 192 (516)
T 1rsg_A 153 -----------------------------------RQFLTNDQIRYLPQLCRYLELWHGLDWKLLSAKDTYFG-----HQ 192 (516)
T ss_dssp -----------------------------------GGGSCHHHHHHHHHHHGGGHHHHTBCTTTSBHHHHCCC-----CS
T ss_pred -----------------------------------hcccCHHHHHHHHHHHHHHHHHhCCChHHCChHHHHhh-----cc
Confidence 00111222222222222222223444555554432211 22
Q ss_pred CccccccchHHHHHHHHhhhc---cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhhhhhh--
Q 046008 1093 GAHCMIKGGYSTVVEALGKEL---LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAE-- 1167 (1624)
Q Consensus 1093 G~~~~VkGGm~sLveALAe~L---~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~vLk~~-- 1167 (1624)
+..+++.| ++.|+++|++.+ +|++|++|++|.+. ++++|.|++.+|+++.||+||+|+|+++|+..
T Consensus 193 ~~~~~~~g-~~~l~~~l~~~l~~~~i~~~~~V~~I~~~--------~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~ 263 (516)
T 1rsg_A 193 GRNAFALN-YDSVVQRIAQSFPQNWLKLSCEVKSITRE--------PSKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQ 263 (516)
T ss_dssp SCCEEESC-HHHHHHHHHTTSCGGGEETTCCEEEEEEC--------TTSCEEEEETTSCEEEEEEEEECCCHHHHHGGGS
T ss_pred CcchhhhC-HHHHHHHHHHhCCCCEEEECCEEEEEEEc--------CCCeEEEEECCCcEEECCEEEECCCHHHhhhccc
Confidence 34455677 999999999988 59999999999983 35679999999999999999999999999753
Q ss_pred -------cccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCcccccccccc----------C------------
Q 046008 1168 -------SIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKET----------D------------ 1218 (1624)
Q Consensus 1168 -------~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~----------~------------ 1218 (1624)
.+.|.|+||+++.++|++++|++++||+|.|+++||+.+...|+...... +
T Consensus 264 ~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (516)
T 1rsg_A 264 PEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLERE 343 (516)
T ss_dssp SCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---
T ss_pred cccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhccccc
Confidence 48999999999999999999999999999999999987633332211100 0
Q ss_pred ---------CCCceeEEeccccCCCCcEEEEEEeCccccccCCC--CHHHHHHH---HHHHHHHHhCC------CCCC--
Q 046008 1219 ---------LRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNV--SPSDHVNH---AVMVLRQIFGA------ASVP-- 1276 (1624)
Q Consensus 1219 ---------~rg~~~~~~n~~ap~G~~vLvayv~G~~A~~~e~l--SdEElie~---aL~~L~kIfG~------~~vp-- 1276 (1624)
.......+++.....+.++|++|+.|..+..++.+ +++++++. +++.|.++||. ...+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~ 423 (516)
T 1rsg_A 344 DSQKHTSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIEN 423 (516)
T ss_dssp ------CCCTTSSCEEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC----
T ss_pred ccccccccccccCceeEEEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCccc
Confidence 00011123344445577899999999999888888 89988765 55666666662 1122
Q ss_pred -----CCc--eEEEeecCCCCCCcccccccCCCCCC-chhhhhCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHH
Q 046008 1277 -----DPV--ASVVTDWGRDPFSYGAYSYVATGASG-EDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRI 1348 (1624)
Q Consensus 1277 -----dPi--~ivvtrW~~dp~s~GsYs~~~pG~~~-~~~d~L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~I 1348 (1624)
.|+ .+++++|..+||++|+|++++||+.. ..++.++.+..+|||||||||+..|+|||+||+.||+|||.+|
T Consensus 424 ~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i 503 (516)
T 1rsg_A 424 IANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRI 503 (516)
T ss_dssp ---CCSCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHH
T ss_pred ccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHH
Confidence 255 88999999999999999999999854 3456666444456999999999989999999999999999999
Q ss_pred HHHHcc
Q 046008 1349 IDILTT 1354 (1624)
Q Consensus 1349 L~~L~~ 1354 (1624)
+..+..
T Consensus 504 ~~~~~~ 509 (516)
T 1rsg_A 504 SDLLKL 509 (516)
T ss_dssp HHHHHG
T ss_pred HHHhhh
Confidence 999874
No 5
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=1.1e-42 Score=432.09 Aligned_cols=434 Identities=23% Similarity=0.340 Sum_probs=306.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHHHH
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQ 940 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~Llke 940 (1624)
.++|+|||||++||+||++|+++|++|+|||+++++||++++.....|+.+|+|++++.+.+ +++..++++
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~---------~~~~~l~~~ 74 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQ---------NRILRLAKE 74 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTC---------HHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCc---------HHHHHHHHH
Confidence 57899999999999999999999999999999999999999988744899999999998653 345568999
Q ss_pred hCCceeeecCCCCeeeccCCccc------CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhhc
Q 046008 941 LGLELTVLNSDCPLYDIVSGQKV------PANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARL 1014 (1624)
Q Consensus 941 LGLel~~l~~~~~~yd~~~Gk~v------p~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~~ 1014 (1624)
+|++..........+...+|..+ |..........+..++..+..+.. .
T Consensus 75 lgl~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~ 128 (520)
T 1s3e_A 75 LGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGR--------------------------E 128 (520)
T ss_dssp TTCCEEECCCSSEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHT--------------------------T
T ss_pred cCCcceecccCCceEEEECCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHh--------------------------h
Confidence 99987654433333333445422 111111111111121111111000 0
Q ss_pred cCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhccccccccccccccccc-ccC----
Q 046008 1015 GRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDD-VYG---- 1089 (1624)
Q Consensus 1015 ~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~-~y~---- 1089 (1624)
.............. +. .....+++.+.+.++..+.++..++.. .++..+..+++.++.... .++
T Consensus 129 ~~~~~~~~~~~~~~-~~-------~~s~~~~l~~~~~~~~~~~~~~~~~~~---~~g~~~~~~s~~~~~~~~~~~g~~~~ 197 (520)
T 1s3e_A 129 IPSDAPWKAPLAEE-WD-------NMTMKELLDKLCWTESAKQLATLFVNL---CVTAETHEVSALWFLWYVKQCGGTTR 197 (520)
T ss_dssp SCTTCGGGSTTHHH-HH-------TSBHHHHHHHHCSSHHHHHHHHHHHHH---HHSSCTTTSBHHHHHHHHHTTTCHHH
T ss_pred cCcCCCccccchhh-hh-------ccCHHHHHHhhCCCHHHHHHHHHHHhh---hcCCChHHhHHHHHHHHHhhcCchhh
Confidence 00000000000000 00 000111333444556666666544321 123445555554321110 000
Q ss_pred ----CCCCccccccchHHHHHHHHhhhc--cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhh
Q 046008 1090 ----GFGGAHCMIKGGYSTVVEALGKEL--LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGC 1163 (1624)
Q Consensus 1090 ----g~~G~~~~VkGGm~sLveALAe~L--~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~v 1163 (1624)
..++..+++.||++.|+++|++.+ +|++|++|++|.. .+++|.|++.+|+++.||+||+|+|+.+
T Consensus 198 ~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~---------~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 198 IISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQ---------TRENVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHCSTTSTTSEEETTCTHHHHHHHHHHHGGGEESSCCEEEEEC---------SSSSEEEEETTSCEEEESEEEECSCGGG
T ss_pred hcccCCCcceEEEeCCHHHHHHHHHHHcCCcEEcCCeeEEEEE---------CCCeEEEEECCCeEEEeCEEEECCCHHH
Confidence 012345788999999999999955 8999999999987 3556889999999999999999999998
Q ss_pred hhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEeccccCCC-CcEEEEEE
Q 046008 1164 LKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVG-APVLIALV 1242 (1624)
Q Consensus 1164 Lk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~n~~ap~G-~~vLvayv 1242 (1624)
+. .+.|.|+||..+.++|++++|++++||+|.|+++||+.. .+.|...... ..+.++.+|+...+++ .++|++|+
T Consensus 269 l~--~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~-~~~g~~~~~~-~~~~~~~~~d~~~~~~~~~~l~~~~ 344 (520)
T 1s3e_A 269 GM--KIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK-DYCGTMIIDG-EEAPVAYTLDDTKPEGNYAAIMGFI 344 (520)
T ss_dssp GG--GSEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGG-TEEEEEEECS-TTCSCSEEEECCCTTSCSCEEEEEE
T ss_pred Hc--ceeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcccCC-CCCceeeccC-CCCceEEEeeCCCCCCCCCEEEEEc
Confidence 76 467889999999999999999999999999999999764 2223221111 1233445566554444 47999999
Q ss_pred eCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCccccc-ccCCCCCCchhhhhCCccCCeEEE
Q 046008 1243 VGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYS-YVATGASGEDYDILGRPVENCLFF 1321 (1624)
Q Consensus 1243 ~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs-~~~pG~~~~~~d~L~tPV~grLyF 1321 (1624)
.+..+..|..++++++++.++++|+++||....+.|..+.+++|..++|+.|+|. +.+||+...+.+.+++|++| |||
T Consensus 345 ~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~-L~f 423 (520)
T 1s3e_A 345 LAHKARKLARLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDR-IYF 423 (520)
T ss_dssp ETHHHHHHTTSCHHHHHHHHHHHHHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTT-EEE
T ss_pred cchhhhhhhcCCHHHHHHHHHHHHHHHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCC-EEE
Confidence 9988888999999999999999999999975456899999999999999999997 77888765566678999987 999
Q ss_pred ecCCccCCCCCcHHHHHHHHHHHHHHHHHHHcc
Q 046008 1322 AGEATCKEHPDTVGGAMLSGLREAVRIIDILTT 1354 (1624)
Q Consensus 1322 AGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~ 1354 (1624)
||++|+..|+|||+||+.||.+||++|+..++.
T Consensus 424 AG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~ 456 (520)
T 1s3e_A 424 AGTETATHWSGYMEGAVEAGERAAREILHAMGK 456 (520)
T ss_dssp CSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTS
T ss_pred eehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhc
Confidence 999999889999999999999999999999974
No 6
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=1.2e-40 Score=408.80 Aligned_cols=436 Identities=27% Similarity=0.403 Sum_probs=296.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHH
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVC 938 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~Ll 938 (1624)
..++|+|||||++||+||++|++.|+ +|+|||+++++||++++.... |+.+|+|++|+.+.... ..+++..++
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~-~~~~d~g~~~~~~~~~~-----~~~~~~~~~ 76 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFA-GINVELGANWVEGVNGG-----KMNPIWPIV 76 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEET-TEEEESSCCEEEEESSS-----SCCTHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccC-CcEEeeCCeEEeccCCC-----CCCHHHHHH
Confidence 35789999999999999999999999 899999999999999998874 89999999999864321 125677899
Q ss_pred HH-hCCceeeecCCCC-e-eeccCCcccCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhhcc
Q 046008 939 AQ-LGLELTVLNSDCP-L-YDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLG 1015 (1624)
Q Consensus 939 ke-LGLel~~l~~~~~-~-yd~~~Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~~~ 1015 (1624)
++ ||+.......... . ....+|..++..... . +......+ ..+.+. ... ...
T Consensus 77 ~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~-~~~~~~~~----------------~~~~~~---~~~--~~~ 131 (472)
T 1b37_A 77 NSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQ---K-RIELADSV----------------EEMGEK---LSA--TLH 131 (472)
T ss_dssp HTTSCCCEEECCCTTGGGCEECSSSSBCCHHHHH---H-HHHHHHHH----------------HHHHHH---HHH--TSC
T ss_pred HhhcCCceeeccCccccceeEcCCCCCCCHHHHH---H-HHHHHHHH----------------HHHHHH---HHH--hhc
Confidence 99 9997654322221 1 112255554422111 0 00000000 011100 000 000
Q ss_pred CCcccccccchh--hHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCC
Q 046008 1016 RGREDASMHNSM--DVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGG 1093 (1624)
Q Consensus 1016 ~~~~~~~~~~a~--d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~g~~G 1093 (1624)
. ......... ..+... .+. ....+ ...++++++...++ +.++...++..+.....|..+++
T Consensus 132 -~-~~~~~~s~~~~~~l~~~------~~~------~~~~~-~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~~ 194 (472)
T 1b37_A 132 -A-SGRDDMSILAMQRLNEH------QPN------GPATP-VDMVVDYYKFDYEF--AEPPRVTSLQNTVPLATFSDFGD 194 (472)
T ss_dssp -T-TCTTCCBHHHHHHHHHT------SSS------SCCSH-HHHHHHHHHTHHHH--SSCGGGBBSTTTSSCHHHHHHCS
T ss_pred -c-ccchhhhHHHHHHHhhh------ccc------ccccH-HHHHHHHHHHhhhh--cccccccchhhccccccccccCC
Confidence 0 000000011 111111 000 00111 22334444322222 23334444433221111111223
Q ss_pred cccc--ccchHHHHHHHHhhhc-------------cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEc
Q 046008 1094 AHCM--IKGGYSTVVEALGKEL-------------LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLIT 1158 (1624)
Q Consensus 1094 ~~~~--VkGGm~sLveALAe~L-------------~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsA 1158 (1624)
..++ +.||++.|+++|++.+ +|++|++|++|.. .+++|.|++.+|++++||+||+|
T Consensus 195 ~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~---------~~~~v~v~~~~g~~~~ad~vI~a 265 (472)
T 1b37_A 195 DVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY---------SPGGVTVKTEDNSVYSADYVMVS 265 (472)
T ss_dssp EEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE---------CSSCEEEEETTSCEEEESEEEEC
T ss_pred ceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEE---------cCCcEEEEECCCCEEEcCEEEEe
Confidence 3333 3899999999998764 5999999999998 35578899999999999999999
Q ss_pred cChhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEE--eccccCCCCc
Q 046008 1159 VPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMF--WNVRKTVGAP 1236 (1624)
Q Consensus 1159 iP~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~--~n~~ap~G~~ 1236 (1624)
+|+.+|+...+.|.|+||+.+.++|++++|++++||+|.|+++||+... .+++.......++.+..+ ++.. .++.+
T Consensus 266 ~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~ 343 (472)
T 1b37_A 266 ASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGK-GREFFLYASSRRGYYGVWQEFEKQ-YPDAN 343 (472)
T ss_dssp SCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCST-TCSEEEECCSSTTSSCEEEECTTT-STTCC
T ss_pred cCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCCC-CcceEEecccCCccceeeecccCC-CCCCC
Confidence 9999998766778999999999999999999999999999999998631 121111011112222122 2222 34567
Q ss_pred EEEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccCCCCCCchhhhhCCccC
Q 046008 1237 VLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVE 1316 (1624)
Q Consensus 1237 vLvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~~~~~d~L~tPV~ 1316 (1624)
+|++++.+..+..|..++++++++.++++|+++||+..+++|+.+.+++|..+||+.|+|+++++|.....++.+++|++
T Consensus 344 ~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~ 423 (472)
T 1b37_A 344 VLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVG 423 (472)
T ss_dssp EEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBT
T ss_pred EEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCC
Confidence 88888877766678888999999999999999997665678999899999999999999998889987666788999998
Q ss_pred CeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHccC
Q 046008 1317 NCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTG 1355 (1624)
Q Consensus 1317 grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~~ 1355 (1624)
+ |||||++|++.|+|||+||+.||++||++|+..++.+
T Consensus 424 ~-l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~ 461 (472)
T 1b37_A 424 R-VYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKK 461 (472)
T ss_dssp T-EEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred c-EEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhC
Confidence 7 9999999999889999999999999999999999853
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=7e-41 Score=407.22 Aligned_cols=428 Identities=22% Similarity=0.308 Sum_probs=290.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHHHH
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQ 940 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~Llke 940 (1624)
.++|+|||||++||+||++|+++|++|+|||+++++||++++... .|+.+|+|++++.+.. .++..++++
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~---------~~~~~~~~~ 74 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI-DGAVLEIGGQWVSPDQ---------TALISLLDE 74 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEE-TTEEEECSCCCBCTTC---------HHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceecccc-CCceeccCCeEecCcc---------HHHHHHHHH
Confidence 468999999999999999999999999999999999999999887 4889999999987642 235568999
Q ss_pred hCCceeeecCCCC-eeeccCCcccCc-----chHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhhc
Q 046008 941 LGLELTVLNSDCP-LYDIVSGQKVPA-----NVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARL 1014 (1624)
Q Consensus 941 LGLel~~l~~~~~-~yd~~~Gk~vp~-----~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~~ 1014 (1624)
+|+.......... .+...+|..+.. .+.......+..++..+..+..... ..
T Consensus 75 ~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 132 (453)
T 2yg5_A 75 LGLKTFERYREGESVYISSAGERTRYTGDSFPTNETTKKEMDRLIDEMDDLAAQIG----------------------AE 132 (453)
T ss_dssp TTCCEEECCCCSEEEEECTTSCEEEECSSSCSCCHHHHHHHHHHHHHHHHHHHHHC----------------------SS
T ss_pred cCCcccccccCCCEEEEeCCCceeeccCCCCCCChhhHHHHHHHHHHHHHHHhhcC----------------------CC
Confidence 9997654432222 221111321110 0111111111111111111100000 00
Q ss_pred cCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccc-ccccccccccc-ccCCC-
Q 046008 1015 GRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLK-EVSLPFWNQDD-VYGGF- 1091 (1624)
Q Consensus 1015 ~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~-~vSl~~~~~~~-~y~g~- 1091 (1624)
.......... +. .....+++.+.+.++..+.++.+++. ..++..+. .+++.++.... .++++
T Consensus 133 ----~~~~~~~~~~-~~-------~~s~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~g~~~ 197 (453)
T 2yg5_A 133 ----EPWAHPLARD-LD-------TVSFKQWLINQSDDAEARDNIGLFIA---GGMLTKPAHSFSALQAVLMAASAGSFS 197 (453)
T ss_dssp ----CGGGSTTHHH-HH-------SSBHHHHHHHHCSCHHHHHHHHHHHC---CCCCCSCTTSSBHHHHHHHHHHTTCHH
T ss_pred ----CCCCCcchhh-hh-------hccHHHHHHhhcCCHHHHHHHHHHHH---hhcccCCcccccHHHHHHHhccCCcHh
Confidence 0000000000 00 00011123333344545554443321 11223333 44433221100 00000
Q ss_pred ------CCccccccchHHHHHHHHhhhc--cccccceEEEEEecCCCCCCCCCCCc-EEEEeCCCcEEEcCEEEEccChh
Q 046008 1092 ------GGAHCMIKGGYSTVVEALGKEL--LIHHNHVVTDISYSFKDSDLSDGQSR-VKVSTSNGSEFSGDAVLITVPLG 1162 (1624)
Q Consensus 1092 ------~G~~~~VkGGm~sLveALAe~L--~IrLNt~VtrI~~~~~~~~~s~~~~~-V~V~TadGeti~AD~VIsAiP~~ 1162 (1624)
++..+++.||++.|+++|++.+ +|++|++|++|..+ +++ |.|++ +|.++.||+||+|+|+.
T Consensus 198 ~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~---------~~~~v~v~~-~~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 198 HLVDEDFILDKRVIGGMQQVSIRMAEALGDDVFLNAPVRTVKWN---------ESGATVLAD-GDIRVEASRVILAVPPN 267 (453)
T ss_dssp HHHCHHHHTCEEETTCTHHHHHHHHHHHGGGEECSCCEEEEEEE---------TTEEEEEET-TTEEEEEEEEEECSCGG
T ss_pred hhccCCCcceEEEcCChHHHHHHHHHhcCCcEEcCCceEEEEEe---------CCceEEEEE-CCeEEEcCEEEEcCCHH
Confidence 1235678999999999999987 89999999999983 455 88877 77899999999999999
Q ss_pred hhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEeccccCCC-CcEEEEE
Q 046008 1163 CLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVG-APVLIAL 1241 (1624)
Q Consensus 1163 vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~n~~ap~G-~~vLvay 1241 (1624)
++. .+.|.|+||+.+.+++++++|++++||++.|+++||+.. .+.|.... ..+.++.+|+...+++ .++|++|
T Consensus 268 ~~~--~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~-~~~g~~~~---~~~~~~~~~~~~~~~~~~~~l~~~ 341 (453)
T 2yg5_A 268 LYS--RISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWRED-GLSGTGFG---ASEVVQEVYDNTNHEDDRGTLVAF 341 (453)
T ss_dssp GGG--GSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGGG-TEEEEEEC---TTSSSCEEEECCCTTCSSEEEEEE
T ss_pred HHh--cCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCCC-CCCceeec---CCCCeEEEEeCCCCCCCCCEEEEE
Confidence 876 467889999999999999999999999999999999754 22232211 1223344555555554 5789999
Q ss_pred EeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCccccc-ccCCCCCCchhhhhCCccCCeEE
Q 046008 1242 VVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYS-YVATGASGEDYDILGRPVENCLF 1320 (1624)
Q Consensus 1242 v~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs-~~~pG~~~~~~d~L~tPV~grLy 1320 (1624)
+.+..+..|..++++++++.++++|+++||.. .+.|..+.+++|..+||++|+|. +..+|....+.+.+++|++| ||
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~-~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~-l~ 419 (453)
T 2yg5_A 342 VSDEKADAMFELSAEERKATILASLARYLGPK-AEEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGP-IH 419 (453)
T ss_dssp EEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGG-GGCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTT-EE
T ss_pred eccHHHHHHhcCCHHHHHHHHHHHHHHHhCcc-CCCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCc-eE
Confidence 98888888888999999999999999999863 56788999999999999999996 66788655555678999987 99
Q ss_pred EecCCccCCCCCcHHHHHHHHHHHHHHHHHHHc
Q 046008 1321 FAGEATCKEHPDTVGGAMLSGLREAVRIIDILT 1353 (1624)
Q Consensus 1321 FAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~ 1353 (1624)
|||++|+..|+|+|+||+.||.+||++|+..|+
T Consensus 420 ~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 420 FSCSDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp ECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred EeecccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 999999988899999999999999999998764
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=1.2e-40 Score=410.28 Aligned_cols=428 Identities=21% Similarity=0.250 Sum_probs=289.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHHHH
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQ 940 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~Llke 940 (1624)
.++|+|||||++||+||++|+++|++|+|||+++++||+++|... .|+.+|+|++|+++.+.+ +..++++
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~-~g~~~d~G~~~~~~~~~~---------~~~~l~~ 108 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNI-DGYPYEMGGTWVHWHQSH---------VWREITR 108 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEE-TTEEEECSCCCBCTTSHH---------HHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceeccc-CCeeecCCCeEecCccHH---------HHHHHHH
Confidence 379999999999999999999999999999999999999999887 489999999999875543 3457889
Q ss_pred hCC--ceeeec---CCCCeeeccC--CcccCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhh
Q 046008 941 LGL--ELTVLN---SDCPLYDIVS--GQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMAR 1013 (1624)
Q Consensus 941 LGL--el~~l~---~~~~~yd~~~--Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~ 1013 (1624)
+|+ ++.... .....|.+.. |..+...... ....+...+..+............
T Consensus 109 lgl~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------------------- 168 (495)
T 2vvm_A 109 YKMHNALSPSFNFSRGVNHFQLRTNPTTSTYMTHEA-EDELLRSALHKFTNVDGTNGRTVL------------------- 168 (495)
T ss_dssp TTCTTCEEESCCCSSSCCEEEEESSTTCCEEECHHH-HHHHHHHHHHHHHCSSSSTTTTTC-------------------
T ss_pred cCCcceeecccccCCCceEEEecCCCCceeecCHHH-HHHHHHHHHHHHHccchhhhhhcC-------------------
Confidence 999 444332 1222333333 3322211111 111111111111000000000000
Q ss_pred ccCCcccccccchhhHhhcccCCCCCCCCcccchhcc--CCHHHHHHHHHHHHhhhhhcccccccccccccccccc----
Q 046008 1014 LGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDI--LSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDV---- 1087 (1624)
Q Consensus 1014 ~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~--Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~---- 1087 (1624)
.. .......... ..+.. ....+++.+.. +++..+.++.+++... ++..+..+++..+.....
T Consensus 169 ~~-~~~~~~~~~~-~~~~~-------~s~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~ 236 (495)
T 2vvm_A 169 PF-PHDMFYVPEF-RKYDE-------MSYSERIDQIRDELSLNERSSLEAFILLC---SGGTLENSSFGEFLHWWAMSGY 236 (495)
T ss_dssp SC-TTSTTSSTTH-HHHHT-------SBHHHHHHHHGGGCCHHHHHHHHHHHHHH---HSSCTTTSBHHHHHHHHHHTTS
T ss_pred CC-CCCcccCcch-hhhhh-------hhHHHHHHHhhccCCHHHHHHHHHHHHHh---cCCCcchhhHHHHHHHHHHcCC
Confidence 00 0000000000 00000 00111222233 5666666666554332 234555555533211100
Q ss_pred -cCC--CCCccccccchHHHHHHHHhhhc------cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEc
Q 046008 1088 -YGG--FGGAHCMIKGGYSTVVEALGKEL------LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLIT 1158 (1624)
Q Consensus 1088 -y~g--~~G~~~~VkGGm~sLveALAe~L------~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsA 1158 (1624)
+.. .....+++.||++.|+++|++.+ +|++|++|++|.. .+++|.|++.+|+++.||+||+|
T Consensus 237 ~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~---------~~~~v~v~~~~g~~~~ad~vI~a 307 (495)
T 2vvm_A 237 TYQGCMDCLMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVN---------ERDAARVTARDGREFVAKRVVCT 307 (495)
T ss_dssp SHHHHHHHHHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEE---------CSSSEEEEETTCCEEEEEEEEEC
T ss_pred CHHHHHhhhceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEE---------cCCEEEEEECCCCEEEcCEEEEC
Confidence 000 01245678999999999998875 3999999999998 34579999999989999999999
Q ss_pred cChhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEeccccCCCCcEE
Q 046008 1159 VPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVL 1238 (1624)
Q Consensus 1159 iP~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~n~~ap~G~~vL 1238 (1624)
+|+.+|. .+.|.|+||+.+.++|+.+.|++++||+|.|+.+||+ .++|+...+ ....+.+.+...+.+.++|
T Consensus 308 ~~~~~l~--~i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~~---~~~g~~~~~---~~~~~~~~~~~~~~~~~vl 379 (495)
T 2vvm_A 308 IPLNVLS--TIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKDMR---SWTGIAYPF---NKLCYAIGDGTTPAGNTHL 379 (495)
T ss_dssp CCGGGGG--GSEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGGGG---GEEEEECSS---CSSCEEEEEEECTTSCEEE
T ss_pred CCHHHHh--heeeCCCCCHHHHHHHHhcCCCceeEEEEEECCccCC---CceeEecCC---CCcEEEecCCCCCCCCeEE
Confidence 9999987 4678999999999999999999999999999999994 234443321 1223333344445566788
Q ss_pred EEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccCCCCCCchhhhhCCccCCe
Q 046008 1239 IALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENC 1318 (1624)
Q Consensus 1239 vayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~~~~~d~L~tPV~gr 1318 (1624)
++|+ +..+. +++++.++.++++|++++|. .++|..+.+++|..+||+.|+|++++||+....++.+++|+++
T Consensus 380 ~~~~-~~~~~----~~~~e~~~~~~~~L~~~~~~--~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~- 451 (495)
T 2vvm_A 380 VCFG-NSANH----IQPDEDVRETLKAVGQLAPG--TFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGG- 451 (495)
T ss_dssp EEEE-CSTTC----CCTTTCHHHHHHHHHTTSTT--SCCEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTT-
T ss_pred EEEe-Ccccc----CCCHHHHHHHHHHHHHhcCC--CCCceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCC-
Confidence 8765 33221 45667788899999999875 3678899999999999999999999999876678889999877
Q ss_pred EEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHccC
Q 046008 1319 LFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTG 1355 (1624)
Q Consensus 1319 LyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~~ 1355 (1624)
|||||++|+..|+||||||+.||++||++|+..++..
T Consensus 452 l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~~ 488 (495)
T 2vvm_A 452 VVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGTK 488 (495)
T ss_dssp EEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCCC
T ss_pred EEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhccc
Confidence 9999999998889999999999999999999999754
No 9
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=5.2e-39 Score=396.06 Aligned_cols=425 Identities=21% Similarity=0.272 Sum_probs=281.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccccccc-CCCccccccceeecccccchhhhccCCcHHHH
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRT-SLSVPVDLGASIITGVEADVATERRADPSSLV 937 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~-~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~L 937 (1624)
...++|+|||||++||+||++|+++|++|+|||+++++||++++... ..++.+|+|++++.... ..+..+
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~---------~~~~~~ 101 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKH---------RIVREY 101 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTC---------HHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchH---------HHHHHH
Confidence 34679999999999999999999999999999999999999988763 24788999999987532 235668
Q ss_pred HHHhCCceeeecC-CCCeeeccCCcccCcc--------------h---HHHHHHHHHHHHHHHHHHHHHhhhhhhhccHH
Q 046008 938 CAQLGLELTVLNS-DCPLYDIVSGQKVPAN--------------V---DEALEAEFNSLLDDMVLLVAQKGEHAMKMSLE 999 (1624)
Q Consensus 938 lkeLGLel~~l~~-~~~~yd~~~Gk~vp~~--------------l---~~~l~~~~~slld~l~~~~~~~g~~a~~~sle 999 (1624)
++++|+....+.. ....+....|...... . .......+...+..+...+.. ....
T Consensus 102 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 174 (498)
T 2iid_A 102 IRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKR-------TNCS 174 (498)
T ss_dssp HHHTTCCEEEECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHH-------SCHH
T ss_pred HHHhCCCceeecccCCccEEEeCCeeecccccccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhh-------ccHH
Confidence 9999998655432 1122222334221100 0 000000000000000000000 0000
Q ss_pred HHHHHHHHHHHHhhccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccc
Q 046008 1000 DGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSL 1079 (1624)
Q Consensus 1000 d~Le~~lk~~r~~~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl 1079 (1624)
.... . .......+++... ..+++.....+...+........+....+..
T Consensus 175 ~~~~------~----------~~~~s~~~~l~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (498)
T 2iid_A 175 YILN------K----------YDTYSTKEYLIKE---------------GDLSPGAVDMIGDLLNEDSGYYVSFIESLKH 223 (498)
T ss_dssp HHHH------H----------HTTSBHHHHHHHT---------------SCCCHHHHHHHHHHTTCGGGTTSBHHHHHHH
T ss_pred HHHH------H----------hhhhhHHHHHHHc---------------cCCCHHHHHHHHHhcCcccchhHHHHHHHHH
Confidence 0000 0 0000011111110 0012222221111100000000000000000
Q ss_pred cccccccccCCCCCccccccchHHHHHHHHhhhc--cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCc----EEEcC
Q 046008 1080 PFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKEL--LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGS----EFSGD 1153 (1624)
Q Consensus 1080 ~~~~~~~~y~g~~G~~~~VkGGm~sLveALAe~L--~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGe----ti~AD 1153 (1624)
.. .+ .....++++.||++.|+++|++.+ +|++|++|++|.. .+++|.|++.+|+ +++||
T Consensus 224 --~~---~~-~~~~~~~~~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~---------~~~~v~v~~~~~~~~~~~~~ad 288 (498)
T 2iid_A 224 --DD---IF-AYEKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQ---------NDQKVTVVYETLSKETPSVTAD 288 (498)
T ss_dssp --HH---HH-TTCCCEEEETTCTTHHHHHHHHHTGGGEESSCEEEEEEE---------CSSCEEEEEECSSSCCCEEEES
T ss_pred --Hh---cc-ccCcceEEeCCcHHHHHHHHHHhcccccccCCEEEEEEE---------CCCeEEEEEecCCcccceEEeC
Confidence 00 00 112345678999999999999988 8999999999998 3557888887774 58999
Q ss_pred EEEEccChhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCcccc-ccccccCCCCceeEEecc-cc
Q 046008 1154 AVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFG-ATAKETDLRGRCFMFWNV-RK 1231 (1624)
Q Consensus 1154 ~VIsAiP~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG-~~~~~~~~rg~~~~~~n~-~a 1231 (1624)
+||+|+|+.++. .+.|.|+||+.+.++|++++|++++||+|.|+++||++.. ++| ....+ ....+++|+. ..
T Consensus 289 ~vI~t~p~~~~~--~i~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~~-~~~~~~~~~---~~~~~~~~~s~~~ 362 (498)
T 2iid_A 289 YVIVCTTSRAVR--LIKFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDG-IHGGKSTTD---LPSRFIYYPNHNF 362 (498)
T ss_dssp EEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGGGT-CCSSEEEES---STTCEEECCSSCC
T ss_pred EEEECCChHHHh--heecCCCCCHHHHHHHHhCCCcceeEEEEEeCCCCccCCC-ccCCcccCC---CCcceEEECCCCC
Confidence 999999999875 5788999999999999999999999999999999997642 222 21111 1223445543 34
Q ss_pred CCCCcEEEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCC----CceEEEeecCCCCCCcccccccCCCCCCch
Q 046008 1232 TVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPD----PVASVVTDWGRDPFSYGAYSYVATGASGED 1307 (1624)
Q Consensus 1232 p~G~~vLvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpd----Pi~ivvtrW~~dp~s~GsYs~~~pG~~~~~ 1307 (1624)
+.|.++|++|++|..+..|..++++++++.++++|+++||... ++ +..+.+++|..+||+.|+|+++.||+...+
T Consensus 363 p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~ 441 (498)
T 2iid_A 363 TNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPK-KDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHF 441 (498)
T ss_dssp TTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTCCH-HHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHH
T ss_pred CCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCCCh-hhhhhhcCccEEEecCCCCCCCceeeecCCcchHHH
Confidence 5667789999999988889999999999999999999998321 11 123678999999999999998888887667
Q ss_pred hhhhCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHcc
Q 046008 1308 YDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTT 1354 (1624)
Q Consensus 1308 ~d~L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~ 1354 (1624)
++.+.+|+++ |||||++|+..+ |||+||+.||++||++|+..+..
T Consensus 442 ~~~l~~p~~~-l~fAGe~t~~~~-g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 442 SDPLTASQGR-IYFAGEYTAQAH-GWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp HHHHHCCBTT-EEECSGGGSSSS-SCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhCCCCc-EEEEEcccccCC-cCHHHHHHHHHHHHHHHHHHhcC
Confidence 7888999876 999999998754 89999999999999999999964
No 10
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=2.1e-38 Score=382.61 Aligned_cols=405 Identities=19% Similarity=0.254 Sum_probs=272.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccC--CCccccccceeeccc-ccchhhhccCCcHHHHH
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTS--LSVPVDLGASIITGV-EADVATERRADPSSLVC 938 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~--~g~~~d~Ga~~I~g~-~~~v~~~~~~nPl~~Ll 938 (1624)
+||+|||||++||+||++|+++|++|+|||+++++||++.+...+ .|..+++|++|+... .. .+..++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~---------~~~~~~ 72 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHP---------RLAAEL 72 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCH---------HHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcH---------HHHHHH
Confidence 689999999999999999999999999999999999999987653 278999999999765 32 234577
Q ss_pred HHhCCceeeecCCCCeee-ccCCccc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHh
Q 046008 939 AQLGLELTVLNSDCPLYD-IVSGQKV-----PANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMA 1012 (1624)
Q Consensus 939 keLGLel~~l~~~~~~yd-~~~Gk~v-----p~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~ 1012 (1624)
+++|++..........+. ...+... +......+ ...+..+......
T Consensus 73 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~------------------------ 124 (431)
T 3k7m_X 73 DRYGIPTAAASEFTSFRHRLGPTAVDQAFPIPGSEAVAV----EAATYTLLRDAHR------------------------ 124 (431)
T ss_dssp HHHTCCEEECCCCCEECCBSCTTCCSSSSCCCGGGHHHH----HHHHHHHHHHHTT------------------------
T ss_pred HHhCCeeeecCCCCcEEEEecCCeecCCCCCCHHHHHHH----HHHHHHHHHHHHh------------------------
Confidence 889998765443332222 2222211 11111111 1111111100000
Q ss_pred hccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccccccC---
Q 046008 1013 RLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYG--- 1089 (1624)
Q Consensus 1013 ~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~--- 1089 (1624)
.. .......... .. ++ ....+++......+....++....... .+..+..+++..+.......
T Consensus 125 -~~-~~~~~~~~~~----~~---~d--~s~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~~ 190 (431)
T 3k7m_X 125 -ID-LEKGLENQDL----ED---LD--IPLNEYVDKLDLPPVSRQFLLAWAWNM---LGQPADQASALWMLQLVAAHHYS 190 (431)
T ss_dssp -CC-TTTCTTSSSC----GG---GC--SBHHHHHHHHTCCHHHHHHHHHHHHHH---HSSCTTTSBHHHHHHHHHHTTSC
T ss_pred -cC-CCCCccCcch----hh---hc--CCHHHHHHhcCCCHHHHHHHHHHHHHh---cCCChhhhhHHHHHHHHHhcCCc
Confidence 00 0000000000 00 00 000112222334444444444332211 22233333332211000000
Q ss_pred ----CCCCccccccchHHHHHHHHhhhc-cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhhh
Q 046008 1090 ----GFGGAHCMIKGGYSTVVEALGKEL-LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCL 1164 (1624)
Q Consensus 1090 ----g~~G~~~~VkGGm~sLveALAe~L-~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~vL 1164 (1624)
-..... .+.+|++.+++++++.+ +|++|++|++|.. ++++|.|++.+|++++||+||+|+|+++|
T Consensus 191 ~~~~~~~~~~-~~~~g~~~l~~~~~~~~g~i~~~~~V~~i~~---------~~~~v~v~~~~g~~~~ad~vi~a~~~~~l 260 (431)
T 3k7m_X 191 ILGVVLSLDE-VFSNGSADLVDAMSQEIPEIRLQTVVTGIDQ---------SGDVVNVTVKDGHAFQAHSVIVATPMNTW 260 (431)
T ss_dssp HHHHHHTCCE-EETTCTHHHHHHHHTTCSCEESSCCEEEEEC---------SSSSEEEEETTSCCEEEEEEEECSCGGGG
T ss_pred cceeecchhh-hcCCcHHHHHHHHHhhCCceEeCCEEEEEEE---------cCCeEEEEECCCCEEEeCEEEEecCcchH
Confidence 001111 57999999999999877 9999999999987 35578999999988999999999999998
Q ss_pred hhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEeccccC-CCCcEEEEEEe
Q 046008 1165 KAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKT-VGAPVLIALVV 1243 (1624)
Q Consensus 1165 k~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~n~~ap-~G~~vLvayv~ 1243 (1624)
+ .+.|.|+||..+.+++..+.++..+||++.|+++||. +|+ .. + +....+++.... .+..+|+.|+.
T Consensus 261 ~--~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~~----i~~-~~-d----~~~~~~~~~~~~~~~~~~l~~~~~ 328 (431)
T 3k7m_X 261 R--RIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEAG----IEC-VG-D----GIFPTLYDYCEVSESERLLVAFTD 328 (431)
T ss_dssp G--GSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCTT----EEE-EB-S----SSSSEEEEEEECSSSEEEEEEEEE
T ss_pred h--heeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCcC----ceE-cC-C----CCEEEEEeCcCCCCCCeEEEEEec
Confidence 7 4788999999999999999999999999999999752 333 11 1 111233333333 56678899988
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccCCCCCCchhhhhCCccCCeEEEec
Q 046008 1244 GKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAG 1323 (1624)
Q Consensus 1244 G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~~~~~d~L~tPV~grLyFAG 1323 (1624)
|.. +...+.+ .+++.|+++||.. + |+.+..++|..+||++|+|++++||+...+++.+++|+++ |||||
T Consensus 329 g~~---~~~~~~~----~~~~~l~~~~~~~--~-~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~-~~fAG 397 (431)
T 3k7m_X 329 SGS---FDPTDIG----AVKDAVLYYLPEV--E-VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGR-IHFVG 397 (431)
T ss_dssp TTT---CCTTCHH----HHHHHHHHHCTTC--E-EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTT-EEECS
T ss_pred ccc---CCCCCHH----HHHHHHHHhcCCC--C-ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCc-EEEEe
Confidence 766 3333433 4567788898752 3 7888899999999999999999999998999999999865 99999
Q ss_pred CCccCCCCCcHHHHHHHHHHHHHHHHH
Q 046008 1324 EATCKEHPDTVGGAMLSGLREAVRIID 1350 (1624)
Q Consensus 1324 EaTs~~~~GtVEGAi~SGiRAA~~IL~ 1350 (1624)
++|+..|.||||||+.||+|||.+|+-
T Consensus 398 e~t~~~~~g~~~GA~~sg~raa~~i~~ 424 (431)
T 3k7m_X 398 SDVSLEFPGYIEGALETAECAVNAILH 424 (431)
T ss_dssp GGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred hhhhccCCeEehHHHHHHHHHHHHHHh
Confidence 999999999999999999999999985
No 11
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=1.4e-36 Score=373.55 Aligned_cols=435 Identities=21% Similarity=0.267 Sum_probs=281.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccC----------------CCccccccceeecccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTS----------------LSVPVDLGASIITGVE 922 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~----------------~g~~~d~Ga~~I~g~~ 922 (1624)
...++|+|||||++||+||++|+++|++|+|||+++++||++++.... .|..++.|++++...+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQSH 88 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETTS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccHH
Confidence 346899999999999999999999999999999999999999887653 4677888888876432
Q ss_pred cchhhhccCCcHHHHHHHhCCceeeecCCC-Ceeec-cC-----CcccCcchHHHHHHHHHHHHHHHHHHHHHhhh-h--
Q 046008 923 ADVATERRADPSSLVCAQLGLELTVLNSDC-PLYDI-VS-----GQKVPANVDEALEAEFNSLLDDMVLLVAQKGE-H-- 992 (1624)
Q Consensus 923 ~~v~~~~~~nPl~~LlkeLGLel~~l~~~~-~~yd~-~~-----Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~-~-- 992 (1624)
.+..+++++|+....+.... ..|.+ .. |..++. .... ..+...+..+......... .
T Consensus 89 ----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~-~~~~~~~~~l~~~~~~~~~~~~~ 155 (489)
T 2jae_A 89 ----------ITLDYCRELGVEIQGFGNQNANTFVNYQSDTSLSGQSVTY--RAAK-ADTFGYMSELLKKATDQGALDQV 155 (489)
T ss_dssp ----------THHHHHHHHTCCEEEECCCCTTSEEECCCSSTTTTCCEEH--HHHH-HHHHHHHHHHHHHHHHHTTTTTT
T ss_pred ----------HHHHHHHHcCCceEEccccCCCceEEecCCcccCCccccH--HHHh-hhhhccHHHHHHHHHhccccccc
Confidence 35569999999876554322 22332 23 543331 1111 1111111111111100000 0
Q ss_pred ---hhhccHHHHHHHHHHHHHHhhccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCH-HHHHHHHHHHHhhhh
Q 046008 993 ---AMKMSLEDGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSP-VERRVMDWHFANLEY 1068 (1624)
Q Consensus 993 ---a~~~sled~Le~~lk~~r~~~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp-~~r~lL~~~~a~ley 1068 (1624)
....++.+++.. ++..... ..+.......++.. ... ...+ .....+ ....+....+ ..+
T Consensus 156 ~~~~~~~~~~~~l~~------~~~~~~~-~~~~~~~~~~~~~~-----~~~--~~~~-~~~~~~~~~~~~~~~~~--~~~ 218 (489)
T 2jae_A 156 LSREDKDALSEFLSD------FGDLSDD-GRYLGSSRRGYDSE-----PGA--GLNF-GTEKKPFAMQEVIRSGI--GRN 218 (489)
T ss_dssp SCHHHHHHHHHHHHH------HTTCCTT-SCCCCCGGGCEEEC-----CCB--TTCC-CEECCCCCHHHHHHHTT--TTT
T ss_pred cchhhHHHHHHHHHH------hhhhhhc-cccccccchhhccC-----CCc--cccc-CCCCCCcCHHHHhhhhH--HHH
Confidence 001122232221 1111000 00000000000000 000 0000 000000 1111111000 000
Q ss_pred hcccccccccccccccccccCCCCCccccccchHHHHHHHHhhhc---cccccceEEEEEecCCCCCCCCCCCcEEEEeC
Q 046008 1069 GCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKEL---LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTS 1145 (1624)
Q Consensus 1069 ~~ga~l~~vSl~~~~~~~~y~g~~G~~~~VkGGm~sLveALAe~L---~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~Ta 1145 (1624)
+.. . ......+.+++++||++.|+++|++.+ +|++|++|++|.+ .+++|.|++.
T Consensus 219 -----~~~--------~-~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~---------~~~~v~v~~~ 275 (489)
T 2jae_A 219 -----FSF--------D-FGYDQAMMMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKN---------VSEGVTVEYT 275 (489)
T ss_dssp -----GGG--------G-GCTTTSSSEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEE---------ETTEEEEEEE
T ss_pred -----Hhh--------h-hccccCccEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEE---------cCCeEEEEEe
Confidence 000 0 001123456789999999999999987 4999999999998 3567889888
Q ss_pred CC---cEEEcCEEEEccChhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCc
Q 046008 1146 NG---SEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGR 1222 (1624)
Q Consensus 1146 dG---eti~AD~VIsAiP~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~ 1222 (1624)
+| +++.||+||+|+|+.+|.. +.| +||+.+.+++++++|+++++|+|.|+++||+....+||.... .....
T Consensus 276 ~g~~~~~~~ad~vI~a~p~~~l~~--l~~--~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~--~~~~~ 349 (489)
T 2jae_A 276 AGGSKKSITADYAICTIPPHLVGR--LQN--NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASN--TDKDI 349 (489)
T ss_dssp ETTEEEEEEESEEEECSCHHHHTT--SEE--CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEE--ESSTT
T ss_pred cCCeEEEEECCEEEECCCHHHHHh--Ccc--CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCccccccc--CCCCc
Confidence 77 6899999999999998863 444 789999999999999999999999999999866556653211 11223
Q ss_pred eeEEeccccC-CCCcEEE-EEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccC
Q 046008 1223 CFMFWNVRKT-VGAPVLI-ALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVA 1300 (1624)
Q Consensus 1223 ~~~~~n~~ap-~G~~vLv-ayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~ 1300 (1624)
.+++++.... ....+|+ +|+.|..+..|..++++++++.++++|+++||....++|..+..++|..++|+.|+|+++.
T Consensus 350 ~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~ 429 (489)
T 2jae_A 350 SQIMFPYDHYNSDRGVVVAYYSSGKRQEAFESLTHRQRLAKAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWA 429 (489)
T ss_dssp CEEECCSSSTTSSCEEEEEEEEETHHHHHHHTSCHHHHHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEET
T ss_pred eEEEeCCCCCCCCCCEEEEEeeCCchhhhhhcCCHHHHHHHHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcc
Confidence 3444443321 1133444 6888888888999999999999999999999862234677788899999999999998776
Q ss_pred ------CCCCCchhhhhCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHcc
Q 046008 1301 ------TGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTT 1354 (1624)
Q Consensus 1301 ------pG~~~~~~d~L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~ 1354 (1624)
||.....++.+++|++| |||||++|+. ++++|+||+.||++||++|+..|+.
T Consensus 430 ~~~~~~~~~~~~~~~~l~~~~~~-l~faG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 430 GSGGSHGGAATPEYEKLLEPVDK-IYFAGDHLSN-AIAWQHGALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp TC-------CCHHHHHHTSCBTT-EEECSGGGBS-STTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccCCCcccchhhHHHHhCCCCc-EEEeEHHhcc-CccHHHHHHHHHHHHHHHHHHHHhh
Confidence 88777778889999877 9999999985 7789999999999999999998864
No 12
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=5.3e-35 Score=355.26 Aligned_cols=419 Identities=18% Similarity=0.228 Sum_probs=267.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC------CcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcH
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQG------FSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPS 934 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g------~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl 934 (1624)
+++|+|||||++||+||++|+++| ++|+|||+++++||++++... .|+.+|.|++++.+.+.. +
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~~~---------~ 74 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKK-DGYIIERGPDSFLERKKS---------A 74 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECC-TTCCEESSCCCEETTCTH---------H
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEecc-CCEEeccChhhhhhCCHH---------H
Confidence 579999999999999999999999 999999999999999999887 489999999998865432 4
Q ss_pred HHHHHHhCCceeeecC-CCCeeeccCCccc--CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHH
Q 046008 935 SLVCAQLGLELTVLNS-DCPLYDIVSGQKV--PANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRM 1011 (1624)
Q Consensus 935 ~~LlkeLGLel~~l~~-~~~~yd~~~Gk~v--p~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~ 1011 (1624)
..+++++|+....... ....|.+.+|... |......+...+..++.. .... ....+...++ .+
T Consensus 75 ~~l~~~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~--~~~~------~~~~~~~~~~------~~ 140 (470)
T 3i6d_A 75 PQLVKDLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVST--GLFS------LSGKARAAMD------FI 140 (470)
T ss_dssp HHHHHHTTCCTTEEECCCCCEEEECSSCEEECCC-----------------------------CCSHHHHHH------HH
T ss_pred HHHHHHcCCcceeecCCCCccEEEECCEEEECCCCcccCCcCchHHhhcc--CcCC------HHHHHHHhcC------cc
Confidence 5699999997554422 2333444455422 221100000000000000 0000 0000000000 00
Q ss_pred hhccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccc-----c
Q 046008 1012 ARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQD-----D 1086 (1624)
Q Consensus 1012 ~~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~-----~ 1086 (1624)
.. .........+.++ +...+.......++..++.. .++..+..+++...... .
T Consensus 141 ~~---~~~~~~~~s~~~~----------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~ 198 (470)
T 3i6d_A 141 LP---ASKTKDDQSLGEF----------------FRRRVGDEVVENLIEPLLSG---IYAGDIDKLSLMSTFPQFYQTEQ 198 (470)
T ss_dssp SC---CCSSSSCCBHHHH----------------HHHHSCHHHHHHTHHHHHHH---TTCSCTTTBBHHHHCGGGCC---
T ss_pred cC---CCCCCCCcCHHHH----------------HHHhcCHHHHHHhccchhcE---EecCCHHHhhHHHHHHHHHHHHH
Confidence 00 0000000111111 11111112222222222211 12233333332110000 0
Q ss_pred cc--------------------CCCCCccccccchHHHHHHHHhhhc---cccccceEEEEEecCCCCCCCCCCCcEEEE
Q 046008 1087 VY--------------------GGFGGAHCMIKGGYSTVVEALGKEL---LIHHNHVVTDISYSFKDSDLSDGQSRVKVS 1143 (1624)
Q Consensus 1087 ~y--------------------~g~~G~~~~VkGGm~sLveALAe~L---~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~ 1143 (1624)
.+ ....+.++++.||++.|+++|++.+ +|++|++|++|.. .+++|.|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~---------~~~~~~v~ 269 (470)
T 3i6d_A 199 KHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSH---------SGSCYSLE 269 (470)
T ss_dssp ----------------------------EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEE---------CSSSEEEE
T ss_pred hcCcHHHHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEE---------cCCeEEEE
Confidence 00 0113456788999999999999998 7999999999998 35579999
Q ss_pred eCCCcEEEcCEEEEccChhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCce
Q 046008 1144 TSNGSEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRC 1223 (1624)
Q Consensus 1144 TadGeti~AD~VIsAiP~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~ 1223 (1624)
+.+|+++.||+||+|+|+.++.. +.+.|++ .+++.+++|+++.+|++.|+.+||+.....+|+...........
T Consensus 270 ~~~g~~~~ad~vi~a~p~~~~~~--l~~~~~~----~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~ 343 (470)
T 3i6d_A 270 LDNGVTLDADSVIVTAPHKAAAG--MLSELPA----ISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAIT 343 (470)
T ss_dssp ESSSCEEEESEEEECSCHHHHHH--HTTTSTT----HHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEE
T ss_pred ECCCCEEECCEEEECCCHHHHHH--HcCCchh----hHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCce
Confidence 99999999999999999998864 4444433 57899999999999999999999987666777654433222222
Q ss_pred eEEe-----ccccCCCCcEEEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccc
Q 046008 1224 FMFW-----NVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSY 1298 (1624)
Q Consensus 1224 ~~~~-----n~~ap~G~~vLvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~ 1298 (1624)
.++| +...+.+..+|.+++.+..+..+..++++++++.++++|.++||.. ++|..+.+++|.. ++..
T Consensus 344 ~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~--~~p~~~~~~~w~~------a~p~ 415 (470)
T 3i6d_A 344 ACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNIN--GEPEMTCVTRWHE------SMPQ 415 (470)
T ss_dssp EEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCC--SCCSEEEEEEEEE------EEEE
T ss_pred EEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCC--CCceEEEEEEcCC------ccCC
Confidence 2343 3345667778888887777777888999999999999999999863 5788899999964 2333
Q ss_pred cCCCCC---CchhhhhCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 046008 1299 VATGAS---GEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDIL 1352 (1624)
Q Consensus 1299 ~~pG~~---~~~~d~L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L 1352 (1624)
+.+|.. ....+.+.+|++| |||||+++.. . +|+||+.||.+||++|++.|
T Consensus 416 ~~~g~~~~~~~~~~~l~~~~~~-l~~aG~~~~g--~-gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 416 YHVGHKQRIKELREALASAYPG-VYMTGASFEG--V-GIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp CBTTHHHHHHHHHHHHHHHSTT-EEECSTTTSC--C-SHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhCCC-EEEEeecCCC--C-CHHHHHHHHHHHHHHHHHHh
Confidence 344432 2344556677777 9999998752 3 59999999999999999887
No 13
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=100.00 E-value=1.2e-34 Score=369.09 Aligned_cols=261 Identities=14% Similarity=0.112 Sum_probs=191.3
Q ss_pred CCCCccccccchHHHHHHHHhhhc----cccccceEE--EEEecCCCCCCCCCCCcEEE-EeCCCc--EEEcCEEEEccC
Q 046008 1090 GFGGAHCMIKGGYSTVVEALGKEL----LIHHNHVVT--DISYSFKDSDLSDGQSRVKV-STSNGS--EFSGDAVLITVP 1160 (1624)
Q Consensus 1090 g~~G~~~~VkGGm~sLveALAe~L----~IrLNt~Vt--rI~~~~~~~~~s~~~~~V~V-~TadGe--ti~AD~VIsAiP 1160 (1624)
++++..+.+.||++.|+++|++.+ .|++|++|+ +|....++ .......|+| .+.+|. +++||+||+|+|
T Consensus 334 ~~~~~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g--~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP 411 (721)
T 3ayj_A 334 DYSNEYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHS--GTASARAQLLSYDSHNAVHSEAYDFVILAVP 411 (721)
T ss_dssp TTTCEECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEEC--SSSSCCEEEEEEETTCCEEEEEESEEEECSC
T ss_pred CCccceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCC--CccccceEEEEEecCCceEEEEcCEEEECCC
Confidence 345667889999999999999986 599999999 99984210 0001124888 556776 899999999999
Q ss_pred hhhhhh----hccc-------C---------------CCCC-c-------HHHHHHHHhcCCccEEEEEEEe-----CCc
Q 046008 1161 LGCLKA----ESIM-------F---------------SPPL-P-------QWKYSAIQRLGFGVLNKVVLEF-----AEV 1201 (1624)
Q Consensus 1161 ~~vLk~----~~I~-------F---------------~P~L-P-------~~k~qAI~~L~yg~l~KV~L~F-----~~~ 1201 (1624)
+++|.. ..|. | .|.| | ..+++||++++|+..+||++.| +++
T Consensus 412 ~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~ 491 (721)
T 3ayj_A 412 HDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQP 491 (721)
T ss_dssp HHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGST
T ss_pred HHHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCC
Confidence 999853 2344 3 4446 9 9999999999999999999999 999
Q ss_pred cccCCC-ccccccccccCCCCceeEEe----ccccCCCCcEEEEEEeCcccccc------CCCCHHHH-------HHHHH
Q 046008 1202 FWDDTV-DYFGATAKETDLRGRCFMFW----NVRKTVGAPVLIALVVGKAAVDG------QNVSPSDH-------VNHAV 1263 (1624)
Q Consensus 1202 fW~~~~-~~fG~~~~~~~~rg~~~~~~----n~~ap~G~~vLvayv~G~~A~~~------e~lSdEEl-------ie~aL 1263 (1624)
||..+. ...+....+.+.+..++..+ +...+..+.+|++|++|..+..| ..+++++. ++.++
T Consensus 492 fW~~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l 571 (721)
T 3ayj_A 492 WVPQWRGEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMV 571 (721)
T ss_dssp TSCEETTEECCEEEETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHH
T ss_pred cccccCCCCceeeecCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHH
Confidence 998761 12233333333332222111 22222234578889999988887 66666666 99999
Q ss_pred HHHH--HHhCCCC------------CCCCceEEEeecCCCCCCcccccccCCCCCC------chh--hhhCCccCCeEEE
Q 046008 1264 MVLR--QIFGAAS------------VPDPVASVVTDWGRDPFSYGAYSYVATGASG------EDY--DILGRPVENCLFF 1321 (1624)
Q Consensus 1264 ~~L~--kIfG~~~------------vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~~------~~~--d~L~tPV~grLyF 1321 (1624)
++|. .+||+.. .-.+.+++..+|..+| +.|+|..+.||+.. .+. ..+..|. |||||
T Consensus 572 ~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~-gri~f 649 (721)
T 3ayj_A 572 NRAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLD-NRFFI 649 (721)
T ss_dssp HHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTC-CCEEE
T ss_pred HHHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCC-CCEEE
Confidence 9999 8888632 0113567889999999 99999999999832 222 2345554 56999
Q ss_pred ecCCccCCCCCcHHHHHHHHHHHHHHHHHHHccC
Q 046008 1322 AGEATCKEHPDTVGGAMLSGLREAVRIIDILTTG 1355 (1624)
Q Consensus 1322 AGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~~ 1355 (1624)
|||+++. +.||||||+.||++||..|+..++++
T Consensus 650 AGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~~ 682 (721)
T 3ayj_A 650 ASDSYSH-LGGWLEGAFMSALNAVAGLIVRANRG 682 (721)
T ss_dssp CSGGGSS-CTTSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred eehhhcc-CCceehHHHHHHHHHHHHHHHHhcCC
Confidence 9999985 78999999999999999999999865
No 14
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=2.1e-34 Score=352.68 Aligned_cols=416 Identities=19% Similarity=0.189 Sum_probs=259.6
Q ss_pred ccCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcH
Q 046008 855 RCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPS 934 (1624)
Q Consensus 855 ~~~~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl 934 (1624)
.++....++|+|||||++||+||++|+++|++|+|||+++++||+++|... .|+.+|+|++++.+.+. .+
T Consensus 10 ~~~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~-~g~~~~~g~~~~~~~~~---------~~ 79 (478)
T 2ivd_A 10 HMPRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHAL-AGYLVEQGPNSFLDREP---------AT 79 (478)
T ss_dssp -------CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEE-TTEEEESSCCCEETTCH---------HH
T ss_pred cCCCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeecc-CCeeeecChhhhhhhhH---------HH
Confidence 344556789999999999999999999999999999999999999999987 48999999999986432 34
Q ss_pred HHHHHHhCCceeeecC---CCCeeeccCCcc--cCcchHHHHHHHHHHHHHHHHHHHHHh---hhhhhhccHHHHHHHHH
Q 046008 935 SLVCAQLGLELTVLNS---DCPLYDIVSGQK--VPANVDEALEAEFNSLLDDMVLLVAQK---GEHAMKMSLEDGLEYAL 1006 (1624)
Q Consensus 935 ~~LlkeLGLel~~l~~---~~~~yd~~~Gk~--vp~~l~~~l~~~~~slld~l~~~~~~~---g~~a~~~sled~Le~~l 1006 (1624)
..+++++|+....... ....+.+.+|.. +|......+...+..+.+.+..+.... .......++.+++...
T Consensus 80 ~~~~~~~gl~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~- 158 (478)
T 2ivd_A 80 RALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLRVAGELFSRRAPEGVDESLAAFGRRH- 158 (478)
T ss_dssp HHHHHHTTCGGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTCSSSCHHHHHHHHGGGGCCCCCTTCCCBHHHHHHHH-
T ss_pred HHHHHHcCCcceeeecCccccceEEEECCEEEECCCCHHHhccCCCCCHHHHHHHhhhhhcCCCCCCCCCCHHHHHHHh-
Confidence 5699999997443322 223344446653 333221111000000000000000000 0000112333333211
Q ss_pred HHHHHhhccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccc---
Q 046008 1007 KRRRMARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWN--- 1083 (1624)
Q Consensus 1007 k~~r~~~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~--- 1083 (1624)
+..+..+.++..++.. .++..+..+++..+.
T Consensus 159 -------------------------------------------~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~~~~ 192 (478)
T 2ivd_A 159 -------------------------------------------LGHRATQVLLDAVQTG---IYAGDVEQLSVAATFPML 192 (478)
T ss_dssp -------------------------------------------TCHHHHHHTHHHHHHH---HHCCCTTTBBHHHHCHHH
T ss_pred -------------------------------------------hCHHHHHHHHHHHhce---eecCCHHHhhHHHHhHHH
Confidence 0111111111111100 011111111111000
Q ss_pred --------------------ccc--ccCC----CCCccccccchHHHHHHHHhhhc--cccccceEEEEEecCCCCCCCC
Q 046008 1084 --------------------QDD--VYGG----FGGAHCMIKGGYSTVVEALGKEL--LIHHNHVVTDISYSFKDSDLSD 1135 (1624)
Q Consensus 1084 --------------------~~~--~y~g----~~G~~~~VkGGm~sLveALAe~L--~IrLNt~VtrI~~~~~~~~~s~ 1135 (1624)
+.. .+.. +.+..++++||++.|+++|++.+ +|++|++|++|...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~-------- 264 (478)
T 2ivd_A 193 VKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASLGDAAHVGARVEGLARE-------- 264 (478)
T ss_dssp HHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--------
T ss_pred HHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEec--------
Confidence 000 0000 11567789999999999999988 89999999999883
Q ss_pred CCCcEEEEe---CCCcEEEcCEEEEccChhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccc
Q 046008 1136 GQSRVKVST---SNGSEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGA 1212 (1624)
Q Consensus 1136 ~~~~V~V~T---adGeti~AD~VIsAiP~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~ 1212 (1624)
+++|.|++ .+|.++.||+||+|+|+.++.. + .|++|+.+.++++++.|+++.+|+|.|++++|+.. ..+|+
T Consensus 265 -~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~--l--l~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-~~~~~ 338 (478)
T 2ivd_A 265 -DGGWRLIIEEHGRRAELSVAQVVLAAPAHATAK--L--LRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAP-DGFGF 338 (478)
T ss_dssp ---CCEEEEEETTEEEEEECSEEEECSCHHHHHH--H--HTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCC-CSSEE
T ss_pred -CCeEEEEEeecCCCceEEcCEEEECCCHHHHHH--H--hhccCHHHHHHHhcCCCCcEEEEEEEEccccCCCC-CceEE
Confidence 44588887 7888999999999999998763 2 26799999999999999999999999999999763 33443
Q ss_pred cccccCCCCceeEEecc-----ccCCCCcEEEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecC
Q 046008 1213 TAKETDLRGRCFMFWNV-----RKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWG 1287 (1624)
Q Consensus 1213 ~~~~~~~rg~~~~~~n~-----~ap~G~~vLvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~ 1287 (1624)
............++|+. ..++|..+|++++.+..+..+..++++++++.+++.|.++||.. ..|..+.+++|.
T Consensus 339 ~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~p~~~~~~~w~ 416 (478)
T 2ivd_A 339 LVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVT--ARPSFTRVFRWP 416 (478)
T ss_dssp ECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCC--SCCSEEEEEEES
T ss_pred EecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCC--CCCcEEEEEECC
Confidence 32211112233344433 23556778888988887777778899999999999999999874 467777889997
Q ss_pred CCCCCcccccccCCCCCCc---hhhhhCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHcc
Q 046008 1288 RDPFSYGAYSYVATGASGE---DYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTT 1354 (1624)
Q Consensus 1288 ~dp~s~GsYs~~~pG~~~~---~~d~L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~ 1354 (1624)
. +|..+.+|.... ..+.+.. ++| |||||+++. + ++|+||+.||++||++|++.++.
T Consensus 417 ~------~~p~~~~g~~~~~~~~~~~~~~-~~~-l~~aG~~~~--g-~gv~gA~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 417 L------GIPQYNLGHLERVAAIDAALQR-LPG-LHLIGNAYK--G-VGLNDCIRNAAQLADALVAGNTS 475 (478)
T ss_dssp S------CCBCCBTTHHHHHHHHHHHHHT-STT-EEECSTTTS--C-CSHHHHHHHHHHHHHHHCC----
T ss_pred C------cccCCCcCHHHHHHHHHHHHhh-CCC-EEEEccCCC--C-CCHHHHHHHHHHHHHHHHHhhcc
Confidence 4 343334554211 1122333 456 999999973 2 35999999999999999988764
No 15
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=1.1e-33 Score=348.70 Aligned_cols=437 Identities=23% Similarity=0.280 Sum_probs=261.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHHH
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCA 939 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~Llk 939 (1624)
..++|+|||||++||+||++|+++|++|+|||+++++||++++... .|+.+|.|++++.+.+. .+..+++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~---------~~~~~~~ 81 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQ-DGLIWDEGANTMTESEG---------DVTFLID 81 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEE-TTEEEESSCCCBCCCSH---------HHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecc-CCeEEecCCcccccCcH---------HHHHHHH
Confidence 4589999999999999999999999999999999999999999887 48999999999986432 3456999
Q ss_pred HhCCceeeecC--CCCeeeccCCccc--CcchHHHHHHHHHHHHHHHHHH---HHHhh-----hhhhhccHHHHHHHHHH
Q 046008 940 QLGLELTVLNS--DCPLYDIVSGQKV--PANVDEALEAEFNSLLDDMVLL---VAQKG-----EHAMKMSLEDGLEYALK 1007 (1624)
Q Consensus 940 eLGLel~~l~~--~~~~yd~~~Gk~v--p~~l~~~l~~~~~slld~l~~~---~~~~g-----~~a~~~sled~Le~~lk 1007 (1624)
+||+....... ....|...+|..+ |......+...+......+... +.... ......++.+++...+.
T Consensus 82 ~lgl~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~ 161 (504)
T 1sez_A 82 SLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQRHFG 161 (504)
T ss_dssp HTTCGGGEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHHHTHHHHC----------CCCBHHHHHHHHHC
T ss_pred HcCCcccceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHHHHHhHhhhccCcccccccCCCCccHHHHHHHHcC
Confidence 99997554332 2223444566543 3322221110000000111000 00000 00112344444432211
Q ss_pred HHHHhhccCCcccccccchhhHh-hcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccc-----cccccc
Q 046008 1008 RRRMARLGRGREDASMHNSMDVY-SKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLK-----EVSLPF 1081 (1624)
Q Consensus 1008 ~~r~~~~~~~~~~~~~~~a~d~f-s~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~-----~vSl~~ 1081 (1624)
.... ..+.+.+ ... ....+.. .....+ -+... +++..++..+. .+....
T Consensus 162 ~~~~------------~~~~~~~~~~~---~~~~~~~-~s~~~~-~~~~~--------~~~~~~g~~~~~~~~~~~~~~~ 216 (504)
T 1sez_A 162 KEVV------------DYLIDPFVAGT---CGGDPDS-LSMHHS-FPELW--------NLEKRFGSVILGAIRSKLSPKN 216 (504)
T ss_dssp HHHH------------HTTHHHHHHHH---HSCCGGG-SBHHHH-CHHHH--------HHHHHTSCHHHHHHHHTTC---
T ss_pred HHHH------------HHHHHHHHccc---cCCChHH-hhHHHH-hHHHH--------HHHHHhCCHHHHHHHhhhcccc
Confidence 1000 0001111 000 0000000 000000 00000 00000000000 000000
Q ss_pred ccc-----ccccCCCCCccccccchHHHHHHHHhhhc---cccccceEEEEEecCCCCCCCCCCC-----cEEEEeC--C
Q 046008 1082 WNQ-----DDVYGGFGGAHCMIKGGYSTVVEALGKEL---LIHHNHVVTDISYSFKDSDLSDGQS-----RVKVSTS--N 1146 (1624)
Q Consensus 1082 ~~~-----~~~y~g~~G~~~~VkGGm~sLveALAe~L---~IrLNt~VtrI~~~~~~~~~s~~~~-----~V~V~Ta--d 1146 (1624)
... ........+..++++||+++|+++|++.+ +|++|++|++|.+. +++ .+.|++. +
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~--------~~~~~~~~~~~v~~~~~~ 288 (504)
T 1sez_A 217 EKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCS--------CTEDSAIDSWSIISASPH 288 (504)
T ss_dssp -------CCCSCCSTTCSCBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEE--------CSSSSSSCEEEEEEBCSS
T ss_pred cccccccchhhccccCCceEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEec--------CCCCcccceEEEEEcCCC
Confidence 000 00000012346778999999999999987 59999999999984 222 1666553 5
Q ss_pred C---cEEEcCEEEEccChhhhhhhccc-CCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccC----
Q 046008 1147 G---SEFSGDAVLITVPLGCLKAESIM-FSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETD---- 1218 (1624)
Q Consensus 1147 G---eti~AD~VIsAiP~~vLk~~~I~-F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~---- 1218 (1624)
| +++.||+||+|+|+.+|...... ..+++++. .+.++.|+++.+|+|.|+.++|+.....||+......
T Consensus 289 g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g 365 (504)
T 1sez_A 289 KRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHG 365 (504)
T ss_dssp SSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGT
T ss_pred CccceeEECCEEEECCCHHHHHHHhhcccCCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCC
Confidence 6 68899999999999998753310 11234322 2677889999999999999999876555665433221
Q ss_pred --CCCceeE--EeccccCCCCcEEEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcc
Q 046008 1219 --LRGRCFM--FWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYG 1294 (1624)
Q Consensus 1219 --~rg~~~~--~~n~~ap~G~~vLvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~G 1294 (1624)
..+..|. +|+...++|..+|++|+.|..+..|..++++++++.++++|+++||.. .+|..+.+++|...
T Consensus 366 ~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~--~~p~~~~~~~w~~~----- 438 (504)
T 1sez_A 366 LKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAE--GEPTYVNHLYWSKA----- 438 (504)
T ss_dssp CCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBC--SCCSSEEEEEEEEE-----
T ss_pred CccceEEeeccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCC--CCCeEEEEeECCCC-----
Confidence 1121221 344445677788999999988888899999999999999999999974 36788889999753
Q ss_pred cccccCCCCCC--chhhhhCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHcc
Q 046008 1295 AYSYVATGASG--EDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTT 1354 (1624)
Q Consensus 1295 sYs~~~pG~~~--~~~d~L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~ 1354 (1624)
|..+.+|... .......+|++| |||||+++. +++|+||+.||.+||++|+..|+.
T Consensus 439 -~p~~~~g~~~~~~~~~~~~~~~~~-l~~aG~~~~---g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 439 -FPLYGHNYDSVLDAIDKMEKNLPG-LFYAGNHRG---GLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp -EECCCTTHHHHHHHHHHHHHHSTT-EEECCSSSS---CSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred -CCccCcCHHHHHHHHHHHHHhCCC-EEEEeecCC---CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 2222333211 112234567777 999999986 358999999999999999999874
No 16
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=6.8e-33 Score=339.31 Aligned_cols=428 Identities=16% Similarity=0.143 Sum_probs=263.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHH
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQG--FSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVC 938 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g--~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~Ll 938 (1624)
.++|+|||||++||+||++|+++| ++|+|||+++++||++++... .|+.+|.|++++.+... .+..++
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~---------~~~~l~ 73 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYRE-DGFTIERGPDSYVARKH---------ILTDLI 73 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECS-TTCCEESSCCCEETTST---------HHHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEee-CCEEEecCchhhhcccH---------HHHHHH
Confidence 479999999999999999999999 999999999999999999887 48999999999876543 355699
Q ss_pred HHhCCceeeecC-CCCeeeccCCccc--Cc--------chHHHHHHHHHHHHH--HHHHHHHHhhh----hhhhccHHHH
Q 046008 939 AQLGLELTVLNS-DCPLYDIVSGQKV--PA--------NVDEALEAEFNSLLD--DMVLLVAQKGE----HAMKMSLEDG 1001 (1624)
Q Consensus 939 keLGLel~~l~~-~~~~yd~~~Gk~v--p~--------~l~~~l~~~~~slld--~l~~~~~~~g~----~a~~~sled~ 1001 (1624)
+++|+....... ....|.+..|... |. .....+...+..... .+......... .....++.++
T Consensus 74 ~~lg~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 153 (475)
T 3lov_A 74 EAIGLGEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQEVADLLLHPSDSLRIPEQDIPLGEY 153 (475)
T ss_dssp HHTTCGGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHHHHHHHHHHSCCTTCCCCSSCCBHHHH
T ss_pred HHcCCcceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHHHHhhCcccCCcccccCCCCCcCHHHH
Confidence 999998655432 2233333444322 21 111110000000000 01111110000 1122344444
Q ss_pred HHHHHHHHHHhhccCCcccccccchhhHh-hcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhccccccccccc
Q 046008 1002 LEYALKRRRMARLGRGREDASMHNSMDVY-SKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLP 1080 (1624)
Q Consensus 1002 Le~~lk~~r~~~~~~~~~~~~~~~a~d~f-s~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~ 1080 (1624)
+...+..... ..+...+ ... ....+.. +.....-+....+... .+.....+...
T Consensus 154 l~~~~~~~~~------------~~~~~~~~~~~---~~~~~~~--ls~~~~~~~~~~~~~~--------~~~l~~~~~~~ 208 (475)
T 3lov_A 154 LRPRLGDALV------------EKLIEPLLSGI---YAGNIDQ--MSTFATYPQFVANEQK--------AGSLFEGMRLM 208 (475)
T ss_dssp HHHHHCHHHH------------HHTHHHHHHGG---GCCCTTT--SBSTTTCHHHHHHHHH--------HSSHHHHHHHT
T ss_pred HHHHhCHHHH------------HHHHHHHhcee---ecCChHH--cCHHHHHHHHHHHHHh--------cCcHHHHHHHh
Confidence 4321110000 0000110 111 0000000 0000011111111000 00000000000
Q ss_pred c----c-ccccccCCCCCccccccchHHHHHHHHhhhc---cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEc
Q 046008 1081 F----W-NQDDVYGGFGGAHCMIKGGYSTVVEALGKEL---LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSG 1152 (1624)
Q Consensus 1081 ~----~-~~~~~y~g~~G~~~~VkGGm~sLveALAe~L---~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~A 1152 (1624)
. . .....+...++.+++++||++.|+++|++.+ +|++|++|++|.. .+++|.|+|.+| ++.|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~---------~~~~~~v~~~~g-~~~a 278 (475)
T 3lov_A 209 RPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLERSEIRLETPLLAISR---------EDGRYRLKTDHG-PEYA 278 (475)
T ss_dssp CC--------------CCSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEE---------ETTEEEEECTTC-CEEE
T ss_pred cccccccccccccccCCCcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEE---------eCCEEEEEECCC-eEEC
Confidence 0 0 0000011123466789999999999999998 7999999999998 355799999999 8999
Q ss_pred CEEEEccChhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEec----
Q 046008 1153 DAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWN---- 1228 (1624)
Q Consensus 1153 D~VIsAiP~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~n---- 1228 (1624)
|+||+|+|+.++.. +.+.|++ +++.++.|+++.+|++.|+.+| +.....+|+............++|.
T Consensus 279 d~vV~a~p~~~~~~--ll~~~~~-----~~~~~~~~~~~~~v~l~~~~~~-~~~~~g~g~l~~~~~~~~~~~~~~~s~~~ 350 (475)
T 3lov_A 279 DYVLLTIPHPQVVQ--LLPDAHL-----PELEQLTTHSTATVTMIFDQQQ-SLPIEGTGFVVNRRAPYSITACTAIDQKW 350 (475)
T ss_dssp SEEEECSCHHHHHH--HCTTSCC-----HHHHTCCEEEEEEEEEEEECCS-SCSSSSSEEEECTTSSCSEEEEEEHHHHC
T ss_pred CEEEECCCHHHHHH--HcCccCH-----HHHhcCCCCeEEEEEEEECCcC-CCCCCCEEEEecCCCCCceEEEEEEcccC
Confidence 99999999998764 4455544 7889999999999999999998 3344566665433322223334443
Q ss_pred -cccCCCCcEEEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccCCCCC---
Q 046008 1229 -VRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGAS--- 1304 (1624)
Q Consensus 1229 -~~ap~G~~vLvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~--- 1304 (1624)
...+. ..+|.+|+.+..+..+..++++++++.++++|+++||.. ++|..+.+++|... +..+.+|..
T Consensus 351 ~~~~p~-~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~--~~p~~~~v~~w~~a------~p~~~~g~~~~~ 421 (475)
T 3lov_A 351 NHSAPD-HTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRT--LEPKQVIISRLMDG------LPAYTVGHADRI 421 (475)
T ss_dssp TTTCTT-EEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSC--CCCSEEEEEEEEEE------EECCCTTHHHHH
T ss_pred CCCCCC-cEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCC--CCCeEEEEEEcccC------CCCCCCChHHHH
Confidence 23333 567888887777777888999999999999999999964 47889999999854 222233432
Q ss_pred CchhhhhCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHcc
Q 046008 1305 GEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTT 1354 (1624)
Q Consensus 1305 ~~~~d~L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~ 1354 (1624)
....+.+.+|++| |||||+++.. .+|+||+.||.+||++|+..|+.
T Consensus 422 ~~~~~~l~~~~~~-l~~aG~~~~g---~g~~~a~~sG~~aA~~i~~~l~~ 467 (475)
T 3lov_A 422 QRVREEVLAQYPG-IYLAGLAYDG---VGLPDCVASAKTMIESIELEQSH 467 (475)
T ss_dssp HHHHHHHHHHSTT-EEECSTTTSC---SSHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHhhCCC-EEEEccCCCC---CCHHHHHHHHHHHHHHHHHHhhc
Confidence 2234556677777 9999998753 35999999999999999998874
No 17
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.97 E-value=1.2e-30 Score=313.98 Aligned_cols=401 Identities=14% Similarity=0.105 Sum_probs=246.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHHHHh
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQL 941 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~LlkeL 941 (1624)
++|+|||||++||+||++|+++|++|+|||+++++||+++++.. .|+.+|.|++++.+.... +++..+++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~-~G~~~d~G~~~~~~~~~~-------~~~~~l~~~l 72 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSY-KGFQLSSGAFHMLPNGPG-------GPLACFLKEV 72 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEE-TTEEEESSSCSCBTTGGG-------SHHHHHHHHT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeecc-CCcEEcCCCceEecCCCc-------cHHHHHHHHh
Confidence 58999999999999999999999999999999999999999887 499999998776543221 4567799999
Q ss_pred CCceeeecCCCCeeecc--C--------CcccCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHH
Q 046008 942 GLELTVLNSDCPLYDIV--S--------GQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRM 1011 (1624)
Q Consensus 942 GLel~~l~~~~~~yd~~--~--------Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~ 1011 (1624)
|+...........+.+. + +..+...... . ..+..+.+.........
T Consensus 73 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----------------~~~~~~~~~~~~~~~~~ 128 (425)
T 3ka7_A 73 EASVNIVRSEMTTVRVPLKKGNPDYVKGFKDISFNDFP-------S-----------------LLSYKDRMKIALLIVST 128 (425)
T ss_dssp TCCCCEEECCCCEEEEESSTTCCSSTTCEEEEEGGGGG-------G-----------------GSCHHHHHHHHHHHHHT
T ss_pred CCCceEEecCCceEEeecCCCcccccccccceehhhhh-------h-----------------hCCHHHHHHHHHHHHhh
Confidence 98765444332221111 0 2211110000 0 00001100000000000
Q ss_pred hhccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhccccccccccccccc-ccccCC
Q 046008 1012 ARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQ-DDVYGG 1090 (1624)
Q Consensus 1012 ~~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~-~~~y~g 1090 (1624)
.. . ......+.+ ++...+..+..+.++..+... .++..+..+++..... ...+ .
T Consensus 129 ~~-~----~~~~~s~~~----------------~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~~~~~~~-~ 183 (425)
T 3ka7_A 129 RK-N----RPSGSSLQA----------------WIKSQVSDEWLIKFADSFCGW---ALSLKSDEVPVEEVFEIIENM-Y 183 (425)
T ss_dssp TT-S----CCCSSBHHH----------------HHHHHCCCHHHHHHHHHHHHH---HHSSCGGGSBHHHHHHHHHHH-H
T ss_pred hh-c----CCCCCCHHH----------------HHHHhcCCHHHHHHHHHHHHH---HhCCCcccchHHHHHHHHHHH-H
Confidence 00 0 000011111 222223344444444433221 1233444444421100 0000 0
Q ss_pred CCCccccccchHHHHHHHHhhhc-----cccccceEEEEEecCCCCCCCCCCCcEE-EEeCCCcEEEcCEEEEccChhhh
Q 046008 1091 FGGAHCMIKGGYSTVVEALGKEL-----LIHHNHVVTDISYSFKDSDLSDGQSRVK-VSTSNGSEFSGDAVLITVPLGCL 1164 (1624)
Q Consensus 1091 ~~G~~~~VkGGm~sLveALAe~L-----~IrLNt~VtrI~~~~~~~~~s~~~~~V~-V~TadGeti~AD~VIsAiP~~vL 1164 (1624)
..+..+++.||++.|+++|++.+ +|++|++|++|..+ ++++. |++ +|.++.||+||+|+|+..+
T Consensus 184 ~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~---------~~~~~gv~~-~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 184 RFGGTGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIE---------NGKAAGIIA-DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHCSCEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE---------TTEEEEEEE-TTEEEECSEEEECSCHHHH
T ss_pred hcCCccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEE---------CCEEEEEEE-CCEEEECCEEEECCCHHHH
Confidence 11345678999999999998865 79999999999983 44565 766 4789999999999999887
Q ss_pred hhhcccCCCCC--cHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEe-----ccccCCCCcE
Q 046008 1165 KAESIMFSPPL--PQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFW-----NVRKTVGAPV 1237 (1624)
Q Consensus 1165 k~~~I~F~P~L--P~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~-----n~~ap~G~~v 1237 (1624)
.. .+...+.+ |..+.+.+.++.+++.++|+|.|++++|.....++... ......+.+ +..+|+|+.+
T Consensus 254 ~~-ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~p~~ap~G~~~ 327 (425)
T 3ka7_A 254 AV-LCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGHTGVLLTPY-----TRRINGVNEVTQADPELAPPGKHL 327 (425)
T ss_dssp HH-HTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCSSSEEECCS-----SSSEEEEECGGGTCGGGSCTTCEE
T ss_pred HH-hcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCcCEEEECCC-----hhhcceEEeccCCCCCcCCCCCeE
Confidence 64 23333444 88889999999999999999999998764332222111 111222222 3346778877
Q ss_pred EEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccCCCCCCchhhhhCCccCC
Q 046008 1238 LIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVEN 1317 (1624)
Q Consensus 1238 Lvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~~~~~d~L~tPV~g 1317 (1624)
+.+++...+ . .... .+++++.++++|+++||.. .+....+++|.. ++..+++|. ..+....+|++|
T Consensus 328 l~~~~~~~~-~-~~~~-~~~~~~~~~~~l~~~~p~~---~~~~~~v~~~~~------~~P~~~~~~--~~~~~~~~p~~g 393 (425)
T 3ka7_A 328 TMCHQYVAP-E-NVKN-LESEIEMGLEDLKEIFPGK---RYEVLLIQSYHD------EWPVNRAAS--GTDPGNETPFSG 393 (425)
T ss_dssp EEEEEEECG-G-GGGG-HHHHHHHHHHHHHHHSTTC---CEEEEEEEEEBT------TBCSBSSCT--TCCCCSBCSSBT
T ss_pred EEEEecccc-c-cccc-hHHHHHHHHHHHHHhCCCC---ceEEEEEEEECC------Ccccccccc--CCCCCCCCCcCC
Confidence 776654322 1 1112 3566799999999999862 344457788874 333334442 234556788888
Q ss_pred eEEEecCCccCCCCCcHHHHHHHHHHHHHHHHH
Q 046008 1318 CLFFAGEATCKEHPDTVGGAMLSGLREAVRIID 1350 (1624)
Q Consensus 1318 rLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~ 1350 (1624)
||+||+++.+.|+..|+||+.||++||++|+.
T Consensus 394 -L~laG~~~~~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 394 -LYVVGDGAKGKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp -EEECSTTSCCTTCCHHHHHHHHHHHHHHC---
T ss_pred -eEEeCCccCCCCCCccHHHHHHHHHHHHHhhC
Confidence 99999999988878999999999999999873
No 18
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.97 E-value=1.5e-30 Score=320.35 Aligned_cols=451 Identities=17% Similarity=0.125 Sum_probs=208.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHHHH
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQ 940 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~Llke 940 (1624)
+++|||||||++||+||++|+++|++|+|||+++++||+++|+.. .|+.||.|++++.+.. ++..+++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~-~G~~~D~G~~~~~~~~----------~~~~l~~~ 69 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYED-QGFTFDAGPTVITDPS----------AIEELFAL 69 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEE-TTEEEECSCCCBSCTH----------HHHHHHHT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEe-CCEEEecCceeecCch----------hHHHHHHH
Confidence 578999999999999999999999999999999999999999987 4999999999987532 23456777
Q ss_pred hCCcee----eecCCC-CeeeccCCcccCcchH-HHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhhc
Q 046008 941 LGLELT----VLNSDC-PLYDIVSGQKVPANVD-EALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARL 1014 (1624)
Q Consensus 941 LGLel~----~l~~~~-~~yd~~~Gk~vp~~l~-~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~~ 1014 (1624)
+|..+. ....+. ..+.+.+|..+....+ ..+...+..+...- ...+..++...... +...
T Consensus 70 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~------------~~~~~~~~~~~~~~--~~~~ 135 (501)
T 4dgk_A 70 AGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRD------------VEGYRQFLDYSRAV--FKEG 135 (501)
T ss_dssp TTCCGGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHH------------HHHHHHHHHHHHHH--TSSS
T ss_pred hcchhhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccc------------cchhhhHHHHHHHh--hhhh
Confidence 775322 111111 1122234443322111 11111111110000 00111111111100 0000
Q ss_pred cCCcccccccchhhHhhcccC---CCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccccccCCC
Q 046008 1015 GRGREDASMHNSMDVYSKTSS---VDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGF 1091 (1624)
Q Consensus 1015 ~~~~~~~~~~~a~d~fs~~~~---i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~g~ 1091 (1624)
.......+.....+.+..... +.......+.+.+.+.++..+.++.++..+.. ..+...+..+.... +...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g----~~p~~~~~~~~~~~--~~~~ 209 (501)
T 4dgk_A 136 YLKLGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVG----GNPFATSSIYTLIH--ALER 209 (501)
T ss_dssp CC--CCCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH----SCC--CCCTHHHHH--HHHS
T ss_pred hhhccccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccC----CCcchhhhhhhhhh--hhhc
Confidence 000001111111111110000 00000011134455677888888876544322 22222222211111 1112
Q ss_pred CCccccccchHHHHHHHHhhhc-----cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhhhhh
Q 046008 1092 GGAHCMIKGGYSTVVEALGKEL-----LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKA 1166 (1624)
Q Consensus 1092 ~G~~~~VkGGm~sLveALAe~L-----~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~vLk~ 1166 (1624)
..+.++++||++.|+++|++.+ +|++|++|++|..+ +++.+.|++.+|+++.||+||+|+++..+..
T Consensus 210 ~~G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~--------~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~ 281 (501)
T 4dgk_A 210 EWGVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETT--------GNKIEAVHLEDGRRFLTQAVASNADVVHTYR 281 (501)
T ss_dssp CCCEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--------TTEEEEEEETTSCEEECSCEEECCC------
T ss_pred cCCeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEee--------CCeEEEEEecCCcEEEcCEEEECCCHHHHHH
Confidence 3345679999999999998866 79999999999984 3444559999999999999999999876543
Q ss_pred hcccCCCCCcHHHHHHHHhcCCc-cEEEEEEEeCCccccCCC--cccccccc----------ccCCCCceeEEec-----
Q 046008 1167 ESIMFSPPLPQWKYSAIQRLGFG-VLNKVVLEFAEVFWDDTV--DYFGATAK----------ETDLRGRCFMFWN----- 1228 (1624)
Q Consensus 1167 ~~I~F~P~LP~~k~qAI~~L~yg-~l~KV~L~F~~~fW~~~~--~~fG~~~~----------~~~~rg~~~~~~n----- 1228 (1624)
..+. ..+++....+.+..+.++ ...++++.++.....-.. .+|+.... ..+....+++...
T Consensus 282 ~Ll~-~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp 360 (501)
T 4dgk_A 282 DLLS-QHPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDS 360 (501)
T ss_dssp ----------------------CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCG
T ss_pred Hhcc-ccccchhhhhhhhccccCCceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCC
Confidence 3222 234555566677777765 456888888875422111 11111100 0111112222221
Q ss_pred cccCCCCcEEEEEEeCccccccCCCC----HHHHHHHHHHHHHHHh-CCCCCCCCc-eEE-Ee--ecCCCCCC-ccc-cc
Q 046008 1229 VRKTVGAPVLIALVVGKAAVDGQNVS----PSDHVNHAVMVLRQIF-GAASVPDPV-ASV-VT--DWGRDPFS-YGA-YS 1297 (1624)
Q Consensus 1229 ~~ap~G~~vLvayv~G~~A~~~e~lS----dEElie~aL~~L~kIf-G~~~vpdPi-~iv-vt--rW~~dp~s-~Gs-Ys 1297 (1624)
..+|+|...+.+++..... .+...+ .+++.+.+++.|.+.| |+. .+-+ ... .+ .|...... .|+ |.
T Consensus 361 ~~ap~G~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~vl~~l~~~~~P~~--~~~i~~~~~~tP~~~~~~~~~~~G~~~g 437 (501)
T 4dgk_A 361 SLAPEGCGSYYVLAPVPHL-GTANLDWTVEGPKLRDRIFAYLEQHYMPGL--RSQLVTHRMFTPFDFRDQLNAYHGSAFS 437 (501)
T ss_dssp GGSSTTCEEEEEEEEECCT-TTSCCCHHHHHHHHHHHHHHHHHHHTCTTH--HHHEEEEEEECTTTTC------------
T ss_pred CcCCCCCceEEEEEecCcc-ccccccHHHHHHHHHHHHHHHHHHhhCCCh--HHceEEEEECCHHHHHHHcCCCCccccC
Confidence 2356777777776643221 122222 3467778888888765 431 1111 111 11 12221111 222 22
Q ss_pred ccC-CCCCCchhhh-hCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHccCCC
Q 046008 1298 YVA-TGASGEDYDI-LGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGND 1357 (1624)
Q Consensus 1298 ~~~-pG~~~~~~d~-L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~~~~ 1357 (1624)
..+ ..+....++. ..+|++| |||||++|.++ +.|.||+.||..||+.|+++|.+|+.
T Consensus 438 ~~~~~~q~~~~RP~~~~t~i~g-Lyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~gG~~ 496 (501)
T 4dgk_A 438 VEPVLTQSAWFRPHNRDKTITN-LYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIGGSH 496 (501)
T ss_dssp ------------------CCTT-EEECCCH--------HHHHHHHHHHHHHHHHHHHC----
T ss_pred hhcchhhccccCCCCCCCCCCC-EEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 111 1222223332 2478998 99999998763 46999999999999999999998753
No 19
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.97 E-value=2.5e-30 Score=318.33 Aligned_cols=429 Identities=14% Similarity=0.110 Sum_probs=247.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHC-CCcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHH
Q 046008 858 IDVKKRIIVIGAGPAGLTAARHLQRQ-GFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSL 936 (1624)
Q Consensus 858 ~~~~~~v~IiGaG~aGl~aA~~L~~~-g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~ 936 (1624)
+....+|||||||++||+||++|+++ |++|+|||+++++||+++|....+|++||.|+|+|+...+. +..
T Consensus 7 p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~---------v~~ 77 (513)
T 4gde_A 7 PDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKY---------FDD 77 (513)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHH---------HHH
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHH---------HHH
Confidence 34568999999999999999999985 99999999999999999997555699999999999865543 345
Q ss_pred HHHHhCCcee-eecCCCCeeeccCCcccCcchHHHH----HHHHHHHHHHHHH-HHHHhhhhhhhccHHHHHHHHHHHHH
Q 046008 937 VCAQLGLELT-VLNSDCPLYDIVSGQKVPANVDEAL----EAEFNSLLDDMVL-LVAQKGEHAMKMSLEDGLEYALKRRR 1010 (1624)
Q Consensus 937 LlkeLGLel~-~l~~~~~~yd~~~Gk~vp~~l~~~l----~~~~~slld~l~~-~~~~~g~~a~~~sled~Le~~lk~~r 1010 (1624)
++.+++.... ........+....|+.++..+...+ ..........+.. ............++.+++...+....
T Consensus 78 l~~e~~~~~~~~~~~~~~~~i~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~l 157 (513)
T 4gde_A 78 CLDEALPKEDDWYTHQRISYVRCQGQWVPYPFQNNISMLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGI 157 (513)
T ss_dssp HHHHHSCSGGGEEEEECCEEEEETTEEEESSGGGGGGGSCHHHHHHHHHHHHHHHHHHHTCCSCCCSHHHHHHHHHHHHH
T ss_pred HHHHhCCccceeEEecCceEEEECCeEeecchhhhhhhcchhhHHHHHHHHHHHHHhhhcccccccCHHHHHHHhhhhhh
Confidence 7888765322 2222233344446654432211100 0001111111111 11111111223455555543322211
Q ss_pred HhhccCCcccccccchhhHh-hcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccccccC
Q 046008 1011 MARLGRGREDASMHNSMDVY-SKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYG 1089 (1624)
Q Consensus 1011 ~~~~~~~~~~~~~~~a~d~f-s~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~ 1089 (1624)
... +...+ ...++.+.......++...+........+...+.. .. ...+.
T Consensus 158 ~~~------------~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~----------~~-------~~~~~ 208 (513)
T 4gde_A 158 ADL------------FMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILG----------KT-------AGNWG 208 (513)
T ss_dssp HHH------------THHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHT----------CC-------CCSCB
T ss_pred hhh------------hcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhc----------cc-------ccccc
Confidence 000 00000 11100000000000111111111111111111100 00 00000
Q ss_pred CCCCccccccchHHHHHHHHhhhc-----cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhhh
Q 046008 1090 GFGGAHCMIKGGYSTVVEALGKEL-----LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCL 1164 (1624)
Q Consensus 1090 g~~G~~~~VkGGm~sLveALAe~L-----~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~vL 1164 (1624)
......+.++||++.|+++|++.| +|++|++|++|..+ ++ .|++.+|+++.||+||+|+|+..|
T Consensus 209 ~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~---------~~--~v~~~~G~~~~ad~vI~t~P~~~l 277 (513)
T 4gde_A 209 PNATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNAN---------NK--TVTLQDGTTIGYKKLVSTMAVDFL 277 (513)
T ss_dssp TTBEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETT---------TT--EEEETTSCEEEEEEEEECSCHHHH
T ss_pred cccceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEcc---------CC--EEEEcCCCEEECCEEEECCCHHHH
Confidence 011123456899999999999877 69999999999873 33 356789999999999999999988
Q ss_pred hhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccc--cccccC----------------C--CCcee
Q 046008 1165 KAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGA--TAKETD----------------L--RGRCF 1224 (1624)
Q Consensus 1165 k~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~--~~~~~~----------------~--rg~~~ 1224 (1624)
.... + +.....+...+.|.++..|+|.|+...+......+++ ...+.. . .....
T Consensus 278 ~~~l----~--~~~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~ 351 (513)
T 4gde_A 278 AEAM----N--DQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPT 351 (513)
T ss_dssp HHHT----T--CHHHHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEEC
T ss_pred HHhc----C--chhhHhhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEE
Confidence 6421 1 3455678889999999999999986544322111111 110000 0 00111
Q ss_pred EEec-----cccCCCCcEEEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCccccccc
Q 046008 1225 MFWN-----VRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYV 1299 (1624)
Q Consensus 1225 ~~~n-----~~ap~G~~vLvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~ 1299 (1624)
..|. ...+.+...+..++.+.....+..++++++++.++++|.++++....+.++...+.+|.. +|...
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~------ayP~y 425 (513)
T 4gde_A 352 MQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDH------GYPTP 425 (513)
T ss_dssp CEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEE------EEECC
T ss_pred EEeccCCCcccccCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCC------eeccc
Confidence 1111 112223344555655555566778999999999999999998866555677888889853 34333
Q ss_pred CCCCC---CchhhhhCCccCCeEEEecCCccCCCC-CcHHHHHHHHHHHHHHHHH
Q 046008 1300 ATGAS---GEDYDILGRPVENCLFFAGEATCKEHP-DTVGGAMLSGLREAVRIID 1350 (1624)
Q Consensus 1300 ~pG~~---~~~~d~L~tPV~grLyFAGEaTs~~~~-GtVEGAi~SGiRAA~~IL~ 1350 (1624)
..|.. ....+.+..+ | |||+|....+.|. +.|++||++|++||+.|++
T Consensus 426 ~~~~~~~~~~~~~~l~~~--~-l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 426 TLEREGTLTQILPKLQDK--D-IWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp BTTHHHHHHHHHHHHHHT--T-EEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CHhHHHHHHHHHHHHhhc--C-cEEecCCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 33332 2234445443 6 9999987666664 6799999999999999985
No 20
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.97 E-value=2.4e-30 Score=316.38 Aligned_cols=406 Identities=19% Similarity=0.182 Sum_probs=250.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHH
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVC 938 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~Ll 938 (1624)
+++|+|||||++||+||++|+++|+ +|+|||+++++||++++.....|+.+|.|++++....... ..+..++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~------~~~~~l~ 75 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALG------ARTLLLV 75 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHH------HHHHHHH
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCccc------HHHHHHH
Confidence 4799999999999999999999999 9999999999999999987656899999999986532110 2245689
Q ss_pred HHhCCceeeecCC--C----CeeeccCCcc--cCcchHHHHHH-------HHHHHHHHHHHHHHHhhhhhhhccHHHHHH
Q 046008 939 AQLGLELTVLNSD--C----PLYDIVSGQK--VPANVDEALEA-------EFNSLLDDMVLLVAQKGEHAMKMSLEDGLE 1003 (1624)
Q Consensus 939 keLGLel~~l~~~--~----~~yd~~~Gk~--vp~~l~~~l~~-------~~~slld~l~~~~~~~g~~a~~~sled~Le 1003 (1624)
++||+........ . ..|.+..|.. +|..+...+.. .+...+..+ ... .......++.+++.
T Consensus 76 ~~lgl~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~s~~~~~~ 151 (477)
T 3nks_A 76 SELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLREL---TKP-RGKEPDETVHSFAQ 151 (477)
T ss_dssp HHTTCGGGEEEECTTSHHHHCEEEEETTEEEECCCSSCC---CCTTSCSCSSHHHHTTT---TSC-CCCSSCCBHHHHHH
T ss_pred HHcCCcceeeecCCCCchhcceEEEECCEEEECCCChhhcccccchhhhHHHHHHHHhh---hcC-CCCCCCcCHHHHHH
Confidence 9999974433211 1 1233334432 22211110000 000000000 000 00001122222222
Q ss_pred HHHHHHHHhhccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccc
Q 046008 1004 YALKRRRMARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWN 1083 (1624)
Q Consensus 1004 ~~lk~~r~~~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~ 1083 (1624)
. +++. .....++..++.. .++..+..+++....
T Consensus 152 ~-----~~g~---------------------------------------~~~~~~~~~~~~~---~~~~~~~~ls~~~~~ 184 (477)
T 3nks_A 152 R-----RLGP---------------------------------------EVASLAMDSLCRG---VFAGNSRELSIRSCF 184 (477)
T ss_dssp H-----HHCH---------------------------------------HHHHHTHHHHHHH---HHSSCTTTBBHHHHC
T ss_pred H-----hhCH---------------------------------------HHHHHHHHHHhcc---cccCCHHHhhHHHHH
Confidence 1 0110 0011111111000 011111111111100
Q ss_pred cc-----ccc-------------------------CCCCCccccccchHHHHHHHHhhhc-----cccccceEEEEEecC
Q 046008 1084 QD-----DVY-------------------------GGFGGAHCMIKGGYSTVVEALGKEL-----LIHHNHVVTDISYSF 1128 (1624)
Q Consensus 1084 ~~-----~~y-------------------------~g~~G~~~~VkGGm~sLveALAe~L-----~IrLNt~VtrI~~~~ 1128 (1624)
.. ..+ .......+++.||++.|+++|++.+ +|++|++|++|...
T Consensus 185 ~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~- 263 (477)
T 3nks_A 185 PSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQ- 263 (477)
T ss_dssp HHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEC-
T ss_pred HHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEc-
Confidence 00 000 0012345788999999999999876 89999999999983
Q ss_pred CCCCCCCCCCc-EEEEeCCCcEEEcCEEEEccChhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCC
Q 046008 1129 KDSDLSDGQSR-VKVSTSNGSEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTV 1207 (1624)
Q Consensus 1129 ~~~~~s~~~~~-V~V~TadGeti~AD~VIsAiP~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~ 1207 (1624)
+++ +.|++. |.++.||+||+|+|+..+... .|++++...+++.++.|.++.+|++.|+.++|+..
T Consensus 264 --------~~~~~~v~~~-~~~~~ad~vv~a~p~~~~~~l----l~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~- 329 (477)
T 3nks_A 264 --------AEGRWKVSLR-DSSLEADHVISAIPASVLSEL----LPAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQ- 329 (477)
T ss_dssp --------GGGCEEEECS-SCEEEESEEEECSCHHHHHHH----SCGGGHHHHHHHHTCCEEEEEEEEEEETTCCCSSC-
T ss_pred --------CCceEEEEEC-CeEEEcCEEEECCCHHHHHHh----ccccCHHHHHHHhcCCCCcEEEEEEEECCCCCCCC-
Confidence 334 888774 558999999999999987632 34456678889999999999999999999999643
Q ss_pred ccccccccccCCCCceeEEecccc------CCCCcEEEEEEeCcccccc----CCCCHHHHHHHHHHHHHHHhCCCCCCC
Q 046008 1208 DYFGATAKETDLRGRCFMFWNVRK------TVGAPVLIALVVGKAAVDG----QNVSPSDHVNHAVMVLRQIFGAASVPD 1277 (1624)
Q Consensus 1208 ~~fG~~~~~~~~rg~~~~~~n~~a------p~G~~vLvayv~G~~A~~~----e~lSdEElie~aL~~L~kIfG~~~vpd 1277 (1624)
.||+.............+|+... +++..+|++++.|.++..+ ..++++++++.++++|.++||.. ++
T Consensus 330 -~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~--~~ 406 (477)
T 3nks_A 330 -GFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLK--EM 406 (477)
T ss_dssp -SSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCC--SC
T ss_pred -CceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCC--CC
Confidence 45655433222333444444321 2366788888877665443 25799999999999999999863 57
Q ss_pred CceEEEeecCCCCCCcccccccCCCCCCc---hhhhhCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHH
Q 046008 1278 PVASVVTDWGRDPFSYGAYSYVATGASGE---DYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDI 1351 (1624)
Q Consensus 1278 Pi~ivvtrW~~dp~s~GsYs~~~pG~~~~---~~d~L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~ 1351 (1624)
|..+.+++|.. +|..+.+|.... ..+.+....++ |||||+++.. ..|++|+.||.+||++|++.
T Consensus 407 ~~~~~v~rw~~------a~p~~~~g~~~~~~~~~~~l~~~~~~-l~l~G~~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 407 PSHCLVHLHKN------CIPQYTLGHWQKLESARQFLTAHRLP-LTLAGASYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp CSEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHHTTCS-EEECSTTTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEEEcCC------ccCCCCCCHHHHHHHHHHHHHhcCCC-EEEEccCCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 88889999974 444444554321 12223322235 9999998642 35999999999999999863
No 21
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.96 E-value=1.8e-28 Score=295.93 Aligned_cols=392 Identities=16% Similarity=0.121 Sum_probs=232.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHHHHh
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQL 941 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~LlkeL 941 (1624)
++|+|||||++||+||++|+++|++|+|||+++++||+++++... |+.+|.|++++.+.... .++..+++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~-g~~~d~G~~~~~~~~~~-------~~~~~l~~~l 72 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYK-GFQLSTGALHMIPHGED-------GPLAHLLRIL 72 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEET-TEEEESSSCSEETTTTS-------SHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccC-CEEEecCCeEEEccCCC-------hHHHHHHHHh
Confidence 489999999999999999999999999999999999999999874 99999999776543221 3566799999
Q ss_pred CCceeeecCCCCeeeccCCcccCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhhccCCcccc
Q 046008 942 GLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGRGREDA 1021 (1624)
Q Consensus 942 GLel~~l~~~~~~yd~~~Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~~~~~~~~~ 1021 (1624)
|+...........+....|..++...... . ....+............... .. .
T Consensus 73 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~-----------------l~~~~~~~~~~~~~~~~~~~--~~-~ 125 (421)
T 3nrn_A 73 GAKVEIVNSNPKGKILWEGKIFHYRESWK-------F-----------------LSVKEKAKALKLLAEIRMNK--LP-K 125 (421)
T ss_dssp TCCCCEEECSSSCEEEETTEEEEGGGGGG-------G-----------------CC--------CCHHHHHTTC--CC-C
T ss_pred CCcceEEECCCCeEEEECCEEEEcCCchh-------h-----------------CCHhHHHHHHHHHHHHHhcc--CC-C
Confidence 98755443332222223554332211000 0 00000000000000000000 00 0
Q ss_pred cccchhhHhhcccCCCCCCCCcccchhc-cCCHHHHHHHHHHHHhhhhhccccccccccccccc-ccccCCCCCcccccc
Q 046008 1022 SMHNSMDVYSKTSSVDSRVPDKDCSRED-ILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQ-DDVYGGFGGAHCMIK 1099 (1624)
Q Consensus 1022 ~~~~a~d~fs~~~~i~~~~p~~d~l~e~-~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~-~~~y~g~~G~~~~Vk 1099 (1624)
....+.+ ++... +-.+..+.++..+.... ++..+..+++..... ...+. ..++.+++.
T Consensus 126 ~~~s~~~----------------~l~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~ 185 (421)
T 3nrn_A 126 EEIPADE----------------WIKEKIGENEFLLSVLESFAGWA---DSVSLSDLTALELAKEIRAAL-RWGGPGLIR 185 (421)
T ss_dssp CCSBHHH----------------HHHHHTCCCHHHHHHHHHHHHHH---HSSCGGGSBHHHHHHHHHHHH-HHCSCEEET
T ss_pred CCCCHHH----------------HHHHhcCCcHHHHHHHHHHHHHh---cCCCcccCCHHHHHHHHHHHh-hcCCcceec
Confidence 0001111 11222 23344444444332211 223334444321100 00000 112346789
Q ss_pred chHHHHHHHHhhhc-----cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhhhhhhcccCCCC
Q 046008 1100 GGYSTVVEALGKEL-----LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESIMFSPP 1174 (1624)
Q Consensus 1100 GGm~sLveALAe~L-----~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~vLk~~~I~F~P~ 1174 (1624)
||++.|+++|++.+ +|++|++|++|.. ++++| | +.+|.++.||+||+|+|+..+.. +.-.+.
T Consensus 186 gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~---------~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~--ll~~~~ 252 (421)
T 3nrn_A 186 GGCKAVIDELERIIMENKGKILTRKEVVEINI---------EEKKV-Y-TRDNEEYSFDVAISNVGVRETVK--LIGRDY 252 (421)
T ss_dssp TCHHHHHHHHHHHHHTTTCEEESSCCEEEEET---------TTTEE-E-ETTCCEEECSEEEECSCHHHHHH--HHCGGG
T ss_pred CCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEE---------ECCEE-E-EeCCcEEEeCEEEECCCHHHHHH--hcCccc
Confidence 99999999998765 8999999999987 35567 6 45778999999999999988764 221245
Q ss_pred CcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCcee--EEeccccCCCCcEEEEEEeCccccccCC
Q 046008 1175 LPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCF--MFWNVRKTVGAPVLIALVVGKAAVDGQN 1252 (1624)
Q Consensus 1175 LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~--~~~n~~ap~G~~vLvayv~G~~A~~~e~ 1252 (1624)
+|+...+.+.++.++...+|++.|+.+.+.....+++.... ..+..+ ..++..+|+|..++.+++.. ..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~p~~ap~G~~~~~~~~~~------~~ 323 (421)
T 3nrn_A 253 FDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGNTIVFTPGLM---INGFNEPSALDKSLAREGYTLIMAHMAL------KN 323 (421)
T ss_dssp SCHHHHHHHHTCCCCCEEEEEEEEESSCSSCSSEEECTTSS---SCEEECGGGTCGGGSCTTEEEEEEEEEC------TT
T ss_pred CCHHHHHHHhCCCCCceEEEEEEEcCCcccCCeEEEcCCcc---eeeEeccCCCCCCcCCCCceEEEEEEee------cc
Confidence 78888889999999999999999998755433223322211 111110 12233456677666665532 22
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCccccc-c-cCCCCCCchhhhhCCccCCeEEEecCCccCCC
Q 046008 1253 VSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYS-Y-VATGASGEDYDILGRPVENCLFFAGEATCKEH 1330 (1624)
Q Consensus 1253 lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs-~-~~pG~~~~~~d~L~tPV~grLyFAGEaTs~~~ 1330 (1624)
.++++.++.++++|.++|| ......+++|.. ++. + ..++.. .+ .+| +| ||+||+++.+.+
T Consensus 324 ~~~~~~~~~~~~~L~~~~p-----~~~~~~~~~~~~------~~p~~~~~~~~~---~~--~~~-~g-l~laGd~~~~~~ 385 (421)
T 3nrn_A 324 GNVKKAIEKGWEELLEIFP-----EGEPLLAQVYRD------GNPVNRTRAGLH---IE--WPL-NE-VLVVGDGYRPPG 385 (421)
T ss_dssp CCHHHHHHHHHHHHHHHCT-----TCEEEEEEEC-------------------C---CC--CCC-SS-EEECSTTCCCTT
T ss_pred ccHHHHHHHHHHHHHHHcC-----CCeEEEeeeccC------CCCcccccCCCC---CC--CCC-Cc-EEEECCcccCCC
Confidence 3455679999999999998 223345677863 222 1 112221 11 566 77 999999998654
Q ss_pred CCcHHHHHHHHHHHHHHH
Q 046008 1331 PDTVGGAMLSGLREAVRI 1348 (1624)
Q Consensus 1331 ~GtVEGAi~SGiRAA~~I 1348 (1624)
+..|+||+.||++||+.|
T Consensus 386 g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 386 GIEVDGIALGVMKALEKL 403 (421)
T ss_dssp CCHHHHHHHHHHHHHHHT
T ss_pred ceeeehHHHHHHHHHHHh
Confidence 446799999999999998
No 22
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.96 E-value=2.6e-28 Score=286.54 Aligned_cols=230 Identities=16% Similarity=0.176 Sum_probs=174.2
Q ss_pred cccccchHHHHHHHHhh--hccccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhhhhhhcccCC
Q 046008 1095 HCMIKGGYSTVVEALGK--ELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESIMFS 1172 (1624)
Q Consensus 1095 ~~~VkGGm~sLveALAe--~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~vLk~~~I~F~ 1172 (1624)
.|.+.+|++.++++|++ +.+|+++++|++|.. .+++|.|++.+|.++.||+||+|+|+..+......+.
T Consensus 104 ~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~---------~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~ 174 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKESGAEVYFRHRVTQINL---------RDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDIT 174 (342)
T ss_dssp EEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEE---------CSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHH
T ss_pred ceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEE---------cCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccc
Confidence 45678999999999998 559999999999998 4567999999998899999999999998764333344
Q ss_pred CCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEeccccCC-----CCcEEEEEEeCccc
Q 046008 1173 PPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTV-----GAPVLIALVVGKAA 1247 (1624)
Q Consensus 1173 P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~n~~ap~-----G~~vLvayv~G~~A 1247 (1624)
|.||+...+++.++.|++..+|+|.|+++||.+. .++|+..... ....+.+++...+. +...+++++.+.++
T Consensus 175 ~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-~~~g~~~~~~--~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~ 251 (342)
T 3qj4_A 175 TLISECQRQQLEAVSYSSRYALGLFYEAGTKIDV-PWAGQYITSN--PCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFG 251 (342)
T ss_dssp HHSCHHHHHHHHTCCBCCEEEEEEECSSCC--CC-SCSEEECSSC--SSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHH
T ss_pred cccCHHHHHHHhcCCccccEEEEEEECCCCccCC-ceeeEEccCC--cceEEEEccccCCCCCCCCCCceEEEECCHHHH
Confidence 6788899999999999999999999999988653 4566544321 12344555554432 34578888888888
Q ss_pred cccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccc-cCCCCCCchhhhhC-CccCCeEEEecCC
Q 046008 1248 VDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSY-VATGASGEDYDILG-RPVENCLFFAGEA 1325 (1624)
Q Consensus 1248 ~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~-~~pG~~~~~~d~L~-tPV~grLyFAGEa 1325 (1624)
..+..++++++++.++++|+++||. .+.|..+.++||...-. .|.. ..++. +. .+.++ |++||++
T Consensus 252 ~~~~~~~~~~~~~~~~~~l~~~~g~--~~~p~~~~v~rW~~a~p---~~~~~~~~~~-------~~~~~~~~-l~laGd~ 318 (342)
T 3qj4_A 252 VTYLEHSIEDVQELVFQQLENILPG--LPQPIATKCQKWRHSQV---TNAAANCPGQ-------MTLHHKPF-LACGGDG 318 (342)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHHSCS--CCCCSEEEEEEETTCSB---SSCCSSSCSC-------EEEETTTE-EEECSGG
T ss_pred HHhhcCCHHHHHHHHHHHHHHhccC--CCCCceeeecccccccc---ccccCCCcce-------eEecCCcc-EEEEccc
Confidence 8888999999999999999999994 56899999999973211 1211 01111 11 23345 9999998
Q ss_pred ccCCCCCcHHHHHHHHHHHHHHHHHHH
Q 046008 1326 TCKEHPDTVGGAMLSGLREAVRIIDIL 1352 (1624)
Q Consensus 1326 Ts~~~~GtVEGAi~SGiRAA~~IL~~L 1352 (1624)
+. +++|+||+.||.+||++|++.|
T Consensus 319 ~~---g~~v~~ai~sg~~aa~~i~~~l 342 (342)
T 3qj4_A 319 FT---QSNFDGCITSALCVLEALKNYI 342 (342)
T ss_dssp GS---CSSHHHHHHHHHHHHHHHTTC-
T ss_pred cC---CCCccHHHHHHHHHHHHHHhhC
Confidence 84 4689999999999999997643
No 23
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.95 E-value=1.6e-26 Score=278.76 Aligned_cols=397 Identities=16% Similarity=0.160 Sum_probs=218.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHH
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQG-FSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVC 938 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g-~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~Ll 938 (1624)
..++|+|||||++||+||++|+++| ++|+|||+++++||+++|... .|+++|+|++++...+. .+..++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~-~G~~~d~G~~~~~~~~~---------~~~~l~ 74 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNY-HGRRYEMGAIMGVPSYD---------TIQEIM 74 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEE-TTEECCSSCCCBCTTCH---------HHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCC-CCcccccCceeecCCcH---------HHHHHH
Confidence 4679999999999999999999999 999999999999999999987 48999999999865432 345689
Q ss_pred HHhCCceeeecCCCCeeeccCCcccCcchHHHHHHHHHHHHHHHHHHHHHhhh------------hhhhccHHHHHHHHH
Q 046008 939 AQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGE------------HAMKMSLEDGLEYAL 1006 (1624)
Q Consensus 939 keLGLel~~l~~~~~~yd~~~Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~------------~a~~~sled~Le~~l 1006 (1624)
+++|++...... ...+...+|..+...........+...+..+...+..... .....++.+++.
T Consensus 75 ~~~g~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~--- 150 (424)
T 2b9w_A 75 DRTGDKVDGPKL-RREFLHEDGEIYVPEKDPVRGPQVMAAVQKLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFLA--- 150 (424)
T ss_dssp HHHCCCCCSCCC-CEEEECTTSCEECGGGCTTHHHHHHHHHHHHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHHH---
T ss_pred HHhCCccccccc-cceeEcCCCCEeccccCcccchhHHHHHHHHHHHHhhhhhhcccccchhhhhhhhccCHHHHHH---
Confidence 999987543211 1123333443221100000000011111111111111000 000112222211
Q ss_pred HHHHHhhccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhccccccccccccccccc
Q 046008 1007 KRRRMARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDD 1086 (1624)
Q Consensus 1007 k~~r~~~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~ 1086 (1624)
.. ..+.....++..+ +...++ .+..+++.+.....
T Consensus 151 -------------------------~~----------------~~~~~~~~~~~~~---~~~~~~-~~~~~~a~~~~~~~ 185 (424)
T 2b9w_A 151 -------------------------LN----------------GCEAARDLWINPF---TAFGYG-HFDNVPAAYVLKYL 185 (424)
T ss_dssp -------------------------HT----------------TCGGGHHHHTTTT---CCCCCC-CTTTSBHHHHHHHS
T ss_pred -------------------------hh----------------CcHHHHHHHHHHH---HhhccC-ChHhcCHHHHHHhh
Confidence 00 0000000000000 000000 11111111100000
Q ss_pred ----ccCCCCCccccccchHHHHHHHHhhhc--cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccC
Q 046008 1087 ----VYGGFGGAHCMIKGGYSTVVEALGKEL--LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVP 1160 (1624)
Q Consensus 1087 ----~y~g~~G~~~~VkGGm~sLveALAe~L--~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP 1160 (1624)
......+..+.+.||++.++++|++.+ +|++|++|++|.. .+++|.|++.+| ++.||+||+|+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~v~~~~~V~~i~~---------~~~~v~v~~~~g-~~~ad~Vv~a~~ 255 (424)
T 2b9w_A 186 DFVTMMSFAKGDLWTWADGTQAMFEHLNATLEHPAERNVDITRITR---------EDGKVHIHTTDW-DRESDVLVLTVP 255 (424)
T ss_dssp CHHHHHHHHHTCCBCCTTCHHHHHHHHHHHSSSCCBCSCCEEEEEC---------CTTCEEEEESSC-EEEESEEEECSC
T ss_pred hHhhhhcccCCceEEeCChHHHHHHHHHHhhcceEEcCCEEEEEEE---------ECCEEEEEECCC-eEEcCEEEECCC
Confidence 000012344578999999999999988 7999999999987 345688999888 599999999999
Q ss_pred hhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCcccccccccc--CCCCceeEEeccccCC-CCcE
Q 046008 1161 LGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKET--DLRGRCFMFWNVRKTV-GAPV 1237 (1624)
Q Consensus 1161 ~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~--~~rg~~~~~~n~~ap~-G~~v 1237 (1624)
+..+. .+.|++|... +.+.++.+..+. +.+.+...|+. +.++.+... ...+.. .+++...++ ...+
T Consensus 256 ~~~~~----~~l~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~ 324 (424)
T 2b9w_A 256 LEKFL----DYSDADDDER-EYFSKIIHQQYM-VDACLVKEYPT----ISGYVPDNMRPERLGHV-MVYYHRWADDPHQI 324 (424)
T ss_dssp HHHHT----TSBCCCHHHH-HHHTTCEEEEEE-EEEEEESSCCS----SEEECGGGGSGGGTTSC-CEEEECCTTCTTSC
T ss_pred HHHHh----hccCCCHHHH-HHHhcCCcceeE-EEEEEeccCCc----ccccccCCCCCcCCCcc-eEEeeecCCCCceE
Confidence 98763 3446666544 356777776643 22223323321 112222211 112212 122222222 2457
Q ss_pred EEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccCCCCCCchhhhhCCccCC
Q 046008 1238 LIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVEN 1317 (1624)
Q Consensus 1238 Lvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~~~~~d~L~tPV~g 1317 (1624)
+++|+.+. ...+..++++++++.+++.|.+ ++.. .+. .+....|...|+. ..- .+..|..... ...++.+|
T Consensus 325 l~~~~~~~-~~~~~~~~~~~~~~~v~~~l~~-l~~~-~~~--~~~~~~w~~~p~~-~~~-~~~~G~~~~~--~~~~~~~~ 395 (424)
T 2b9w_A 325 ITTYLLRN-HPDYADKTQEECRQMVLDDMET-FGHP-VEK--IIEEQTWYYFPHV-SSE-DYKAGWYEKV--EGMQGRRN 395 (424)
T ss_dssp EEEEEECC-BTTBCCCCHHHHHHHHHHHHHH-TTCC-EEE--EEEEEEEEEEEEC-CHH-HHHTTHHHHH--HHTTTGGG
T ss_pred EEEEeccC-CCcccccChHHHHHHHHHHHHH-cCCc-ccc--cccccceeeeecc-CHH-HHhccHHHHH--HHHhCCCC
Confidence 78887764 4567778899999999999998 5431 111 2233466432210 000 0111111111 11233445
Q ss_pred eEEEecCCccCCCCCcHHHHHHHHHHHHHHHH
Q 046008 1318 CLFFAGEATCKEHPDTVGGAMLSGLREAVRII 1349 (1624)
Q Consensus 1318 rLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL 1349 (1624)
|||||+++. .|++|+|+.||++||++|+
T Consensus 396 -l~~aG~~~~---~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 396 -TFYAGEIMS---FGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp -EEECSGGGS---CSSHHHHHHHHHHHHHHHT
T ss_pred -ceEeccccc---cccHHHHHHHHHHHHHHhc
Confidence 999999875 4789999999999999875
No 24
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.94 E-value=6.9e-26 Score=280.00 Aligned_cols=424 Identities=16% Similarity=0.085 Sum_probs=245.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHH
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQG-FSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVC 938 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g-~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~Ll 938 (1624)
..++|+|||||++||+||++|+++| ++|+|||+++++||++++.....|+.+|.|++++..... .+..++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~---------~~~~l~ 78 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQ---------YFDDVM 78 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBH---------HHHHHH
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChH---------HHHHHH
Confidence 4689999999999999999999999 799999999999999999633358999999999976432 234577
Q ss_pred HHhCCceeeecCCCCeeeccCCcccCcchHHH---HH-HHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhhc
Q 046008 939 AQLGLELTVLNSDCPLYDIVSGQKVPANVDEA---LE-AEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARL 1014 (1624)
Q Consensus 939 keLGLel~~l~~~~~~yd~~~Gk~vp~~l~~~---l~-~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~~ 1014 (1624)
++++-....... ..+....|..++..+... +. ......+..+.... .........++++++...+.....
T Consensus 79 ~~~~~~~~~~~~--~~~~~~~g~~~~~P~~~~~~~l~~~~~~~~~~~ll~~~-~~~~~~~~~s~~e~~~~~~g~~~~--- 152 (484)
T 4dsg_A 79 DWAVQGWNVLQR--ESWVWVRGRWVPYPFQNNIHRLPEQDRKRCLDELVRSH-ARTYTEPPNNFEESFTRQFGEGIA--- 152 (484)
T ss_dssp HHHCSCEEEEEC--CCEEEETTEEEESSGGGCGGGSCHHHHHHHHHHHHHHH-HCCCSSCCSSHHHHHHHHHHHHHC---
T ss_pred HHHhhhhhhccC--ceEEEECCEEEEeCccchhhhCCHHHHHHHHHHHHHHH-hccCCCCCCCHHHHHHHHhHHHHH---
Confidence 776532222212 223334554332221000 00 00011111111110 001112245666666543322110
Q ss_pred cCCcccccccchhhHh-hcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCC
Q 046008 1015 GRGREDASMHNSMDVY-SKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGG 1093 (1624)
Q Consensus 1015 ~~~~~~~~~~~a~d~f-s~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~g~~G 1093 (1624)
..+...| ...++.+.......++...+..+....++...+... .. ..+ +..+
T Consensus 153 ---------~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~--------~~---------~~~-~~~~ 205 (484)
T 4dsg_A 153 ---------DIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENR--------DD---------LGW-GPNA 205 (484)
T ss_dssp ---------CCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTC--------CC---------CCC-STTS
T ss_pred ---------HHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcc--------cc---------cCC-Cccc
Confidence 0111111 111111000000001111111111122221111000 00 000 0112
Q ss_pred cc-ccccchHHHHHHHHhhhc---ccccc--ceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhhhhhh
Q 046008 1094 AH-CMIKGGYSTVVEALGKEL---LIHHN--HVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAE 1167 (1624)
Q Consensus 1094 ~~-~~VkGGm~sLveALAe~L---~IrLN--t~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~vLk~~ 1167 (1624)
.+ |.+.||++.|+++|++.+ +|++| ++|++|... +++| ++.+|+++.||+||+|+|+..+...
T Consensus 206 ~f~yp~~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~---------~~~v--~~~~G~~~~ad~VI~a~p~~~~~~l 274 (484)
T 4dsg_A 206 TFRFPQRGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDAD---------AKTI--TFSNGEVVSYDYLISTVPFDNLLRM 274 (484)
T ss_dssp EEEEESSSCTHHHHHHHHHHSCGGGEEECGGGCEEEEETT---------TTEE--EETTSCEEECSEEEECSCHHHHHHH
T ss_pred eEEeecCCCHHHHHHHHHhhhhhCeEEECCCceeEEEEec---------CCEE--EECCCCEEECCEEEECCCHHHHHHH
Confidence 22 235799999999999988 79999 569999873 4444 4578889999999999999988654
Q ss_pred cccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEE----eccccCCCCcEEEEEEe
Q 046008 1168 SIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMF----WNVRKTVGAPVLIALVV 1243 (1624)
Q Consensus 1168 ~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~----~n~~ap~G~~vLvayv~ 1243 (1624)
.....|++|+...+++..+.|.++.+|++.|+.+...+-...+++..++.........+ |+...++|..++...+.
T Consensus 275 l~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~ 354 (484)
T 4dsg_A 275 TKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVS 354 (484)
T ss_dssp EECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEE
T ss_pred hhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEe
Confidence 33334568888899999999999999999999863221123344433332221111222 22334566666666554
Q ss_pred CccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCc-eEEEeecCCCCCCcccccccCCCCCC---chhhhhCCccCCeE
Q 046008 1244 GKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPV-ASVVTDWGRDPFSYGAYSYVATGASG---EDYDILGRPVENCL 1319 (1624)
Q Consensus 1244 G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi-~ivvtrW~~dp~s~GsYs~~~pG~~~---~~~d~L~tPV~grL 1319 (1624)
.. ....++++++++.++++|.++.+-. ..+++ ...+.+|. .+|....+|... ...+.+.. . | |
T Consensus 355 ~~---~~~~~~d~~l~~~a~~~L~~~~~~~-~~~~~~~~~v~r~~------~~yP~y~~~~~~~~~~~~~~l~~-~-~-l 421 (484)
T 4dsg_A 355 ES---KYKPVNHSTLIEDCIVGCLASNLLL-PEDLLVSKWHYRIE------KGYPTPFIGRNNLLEKAQPELMS-R-C-I 421 (484)
T ss_dssp EB---TTBCCCTTSHHHHHHHHHHHTTSCC-TTCCEEEEEEEEEE------EEEECCBTTHHHHHHHHHHHHHH-T-T-E
T ss_pred cC---cCCcCCHHHHHHHHHHHHHHcCCCC-ccceEEEEEEEEeC------ccccCCCccHHHHHHHHHHHHHh-C-C-c
Confidence 32 3346789999999999999986432 12343 34678886 356555555332 23333433 3 6 9
Q ss_pred EEecCCccCCCC-CcHHHHHHHHHHHHHHHH
Q 046008 1320 FFAGEATCKEHP-DTVGGAMLSGLREAVRII 1349 (1624)
Q Consensus 1320 yFAGEaTs~~~~-GtVEGAi~SGiRAA~~IL 1349 (1624)
+|+|....+.|. +.|++||.+|++||++|+
T Consensus 422 ~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 422 YSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp EECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred EeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 999997766553 369999999999999885
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.92 E-value=5e-24 Score=247.84 Aligned_cols=223 Identities=16% Similarity=0.173 Sum_probs=163.8
Q ss_pred ccccchHHHHHHHHhhhccccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEE-cCEEEEccChhhhhhhcccCCCC
Q 046008 1096 CMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFS-GDAVLITVPLGCLKAESIMFSPP 1174 (1624)
Q Consensus 1096 ~~VkGGm~sLveALAe~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~-AD~VIsAiP~~vLk~~~I~F~P~ 1174 (1624)
+....|+..|.++|+++++|+++++|+.|.. ++++|.|++.+|..+. ||+||+|+|+..+... +.+
T Consensus 103 ~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~---------~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~-~~~--- 169 (336)
T 1yvv_A 103 WVGKPGMSAITRAMRGDMPVSFSCRITEVFR---------GEEHWNLLDAEGQNHGPFSHVIIATPAPQASTL-LAA--- 169 (336)
T ss_dssp EEESSCTHHHHHHHHTTCCEECSCCEEEEEE---------CSSCEEEEETTSCEEEEESEEEECSCHHHHGGG-GTT---
T ss_pred EEcCccHHHHHHHHHccCcEEecCEEEEEEE---------eCCEEEEEeCCCcCccccCEEEEcCCHHHHHHh-hcc---
Confidence 3456789999999999999999999999998 4567999999997764 9999999999876532 223
Q ss_pred CcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEeccccCC--CC-cEEEEEEeCccccccC
Q 046008 1175 LPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTV--GA-PVLIALVVGKAAVDGQ 1251 (1624)
Q Consensus 1175 LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~n~~ap~--G~-~vLvayv~G~~A~~~e 1251 (1624)
. +....++..+.|++..++++.|+.++|... ..++.. .....+++.+...+. +. ..++.+..+..+..+.
T Consensus 170 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~ 242 (336)
T 1yvv_A 170 A-PKLASVVAGVKMDPTWAVALAFETPLQTPM-QGCFVQ-----DSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNL 242 (336)
T ss_dssp C-HHHHHHHTTCCEEEEEEEEEEESSCCSCCC-CEEEEC-----SSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTT
T ss_pred C-HHHHHHHhhcCccceeEEEEEecCCCCCCC-CeEEeC-----CCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHH
Confidence 2 345588899999999999999999988653 233221 112223333333222 21 3567777777778888
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccCCCCCCchhhhhCCccCCeEEEecCCccCCCC
Q 046008 1252 NVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCKEHP 1331 (1624)
Q Consensus 1252 ~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~~~~~d~L~tPV~grLyFAGEaTs~~~~ 1331 (1624)
.++++++.+.+++.|..+||.. .+.|....+.+|. |++..|.. +.. .+..+.+ ||+||||++. .
T Consensus 243 ~~~~~~~~~~l~~~l~~~lg~~-~~~p~~~~~~rw~---~a~~~~~~---~~~-----~~~~~~~-rl~laGDa~~---g 306 (336)
T 1yvv_A 243 DASREQVIEHLHGAFAELIDCT-MPAPVFSLAHRWL---YARPAGAH---EWG-----ALSDADL-GIYVCGDWCL---S 306 (336)
T ss_dssp TSCHHHHHHHHHHHHHTTCSSC-CCCCSEEEEEEEE---EEEESSCC---CCS-----CEEETTT-TEEECCGGGT---T
T ss_pred hCCHHHHHHHHHHHHHHHhCCC-CCCCcEEEccccC---ccCCCCCC---CCC-----eeecCCC-CEEEEecCCC---C
Confidence 9999999999999999999963 5678888899997 22333321 110 1112334 4999999985 3
Q ss_pred CcHHHHHHHHHHHHHHHHHHHcc
Q 046008 1332 DTVGGAMLSGLREAVRIIDILTT 1354 (1624)
Q Consensus 1332 GtVEGAi~SGiRAA~~IL~~L~~ 1354 (1624)
++|+||+.||.++|+.|+..++.
T Consensus 307 ~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 307 GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHhhh
Confidence 58999999999999999999874
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.86 E-value=4.2e-22 Score=240.33 Aligned_cols=258 Identities=18% Similarity=0.168 Sum_probs=147.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCcEEEEcccccCCCcccccccC-CCccc-cccceeecccccchhhhccCCcHHH
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQ-GFSVTVLEARNRIGGRVYTDRTS-LSVPV-DLGASIITGVEADVATERRADPSSL 936 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~-g~~v~vlE~~~~~GG~~~s~~~~-~g~~~-d~Ga~~I~g~~~~v~~~~~~nPl~~ 936 (1624)
..++|+|||||++||+||++|+++ |++|+|||+++++||++++.... .|+.+ +.|++++...+.. +..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~---------~~~ 76 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKR---------VWD 76 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHH---------HHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHH---------HHH
Confidence 368999999999999999999999 99999999999999999998763 47877 5999999864432 445
Q ss_pred HHHHhCCceeeecCCCCeeeccCCcccCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhhccC
Q 046008 937 VCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGR 1016 (1624)
Q Consensus 937 LlkeLGLel~~l~~~~~~yd~~~Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~~~~ 1016 (1624)
+++++|+-. .. ....+...+|..++...... .+..++... ...... ...+.. .....
T Consensus 77 ~~~~~g~~~-~~--~~~~~~~~~G~~~~~p~~~~---~~~~l~~~~-------------~~~~~~-~~~l~~--~~~~~- 133 (399)
T 1v0j_A 77 YVRQFTDFT-DY--RHRVFAMHNGQAYQFPMGLG---LVSQFFGKY-------------FTPEQA-RQLIAE--QAAEI- 133 (399)
T ss_dssp HHTTTCCBC-CC--CCCEEEEETTEEEEESSSHH---HHHHHHTSC-------------CCHHHH-HHHHHH--HGGGS-
T ss_pred HHHHhhhhh-cc--ccceEEEECCEEEeCCCCHH---HHHHHhccc-------------CCHHHH-HHHHHH--Hhhcc-
Confidence 888888721 11 22233345675443221110 011111000 000110 000000 00000
Q ss_pred CcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhccccccccccccccccc---cc-CC-C
Q 046008 1017 GREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDD---VY-GG-F 1091 (1624)
Q Consensus 1017 ~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~---~y-~g-~ 1091 (1624)
.......+ .+++.+.+-......++..+. ...++..+..+++....... .+ .+ +
T Consensus 134 --~~~~~~s~----------------~e~l~~~~g~~~~~~~~~~~~---~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~ 192 (399)
T 1v0j_A 134 --DTADAQNL----------------EEKAISLIGRPLYEAFVKGYT---AKQWQTDPKELPAANITRLPVRYTFDNRYF 192 (399)
T ss_dssp --CTTC--------------------CCHHHHHHCHHHHHHHTHHHH---HHHHTSCGGGSCGGGCSCCCCCSSSCCCSC
T ss_pred --CCCCcccH----------------HHHHHHHHhHHHHHHHHHHHH---HhhcCCChhhcChHhhhcceeEeccccchh
Confidence 00000000 112222222222233333322 12234555566543321000 00 00 1
Q ss_pred CCcc-ccccchHHHHHHHHhhhc--cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEE-EcCEEEEccChhhhhhh
Q 046008 1092 GGAH-CMIKGGYSTVVEALGKEL--LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEF-SGDAVLITVPLGCLKAE 1167 (1624)
Q Consensus 1092 ~G~~-~~VkGGm~sLveALAe~L--~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti-~AD~VIsAiP~~vLk~~ 1167 (1624)
...+ .+++||+++|+++|++.+ +|++|++|++|.. . | . ++ .||+||+|+|+..+..
T Consensus 193 ~~~~~~~p~gG~~~l~~~l~~~~g~~I~l~~~V~~I~~---------~---v-----~--~~~~aD~VI~t~p~~~l~~- 252 (399)
T 1v0j_A 193 SDTYEGLPTDGYTAWLQNMAADHRIEVRLNTDWFDVRG---------Q---L-----R--PGSPAAPVVYTGPLDRYFD- 252 (399)
T ss_dssp CCSEEECBTTHHHHHHHHHTCSTTEEEECSCCHHHHHH---------H---H-----T--TTSTTCCEEECSCHHHHTT-
T ss_pred hhhhcccccccHHHHHHHHHhcCCeEEEECCchhhhhh---------h---h-----h--hcccCCEEEECCcHHHHHh-
Confidence 1123 278999999999999865 8999999999964 1 2 1 35 7999999999998752
Q ss_pred cccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccc
Q 046008 1168 SIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFW 1203 (1624)
Q Consensus 1168 ~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW 1203 (1624)
+ .+..+.|.++..+++.++.+.+
T Consensus 253 -~------------~l~~l~y~s~~~~~~~~~~~~~ 275 (399)
T 1v0j_A 253 -Y------------AEGRLGWRTLDFEVEVLPIGDF 275 (399)
T ss_dssp -T------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred -h------------hhCCCCcceEEEEEEEEccccC
Confidence 1 2357888888888999876543
No 27
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.79 E-value=3.7e-19 Score=212.43 Aligned_cols=251 Identities=16% Similarity=0.167 Sum_probs=144.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccc-cccceeecccccchhhhccCCcHHHHHHH
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPV-DLGASIITGVEADVATERRADPSSLVCAQ 940 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~-d~Ga~~I~g~~~~v~~~~~~nPl~~Llke 940 (1624)
++|+|||||++||+||++|+++|++|+|||+++++||++++... .|+.+ +.|++++...+.. +..++.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~~G~~~~~~~~~~---------~~~~~~~ 71 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDC-EGIQIHKYGAHIFHTNDKY---------IWDYVND 71 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEE-TTEEEETTSCCCEEESCHH---------HHHHHHT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeecc-CCceeeccCCceecCCCHH---------HHHHHHH
Confidence 58999999999999999999999999999999999999999876 48888 4999999865432 3346777
Q ss_pred hCCceeeecCCCCeeeccCCccc--CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhhccCCc
Q 046008 941 LGLELTVLNSDCPLYDIVSGQKV--PANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGRGR 1018 (1624)
Q Consensus 941 LGLel~~l~~~~~~yd~~~Gk~v--p~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~~~~~~ 1018 (1624)
+|.... . .... +....|..+ |..... +..++. . ....+... .+... ... .
T Consensus 72 l~~~~~-~-~~~~-~~~~~g~~~~~p~~~~~-----~~~l~~-------~-------~~~~~~~~-~l~~~--~~~---~ 123 (367)
T 1i8t_A 72 LVEFNR-F-TNSP-LAIYKDKLFNLPFNMNT-----FHQMWG-------V-------KDPQEAQN-IINAQ--KKK---Y 123 (367)
T ss_dssp TSCBCC-C-CCCC-EEEETTEEEESSBSHHH-----HHHHHC-------C-------CCHHHHHH-HHHHH--TTT---T
T ss_pred hhhhhh-c-cccc-eEEECCeEEEcCCCHHH-----HHHHhc-------c-------CCHHHHHH-HHHHH--hhc---c
Confidence 875321 1 1122 233456533 333211 111100 0 00111110 00000 000 0
Q ss_pred ccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhccccccccccccccccc-cc--C--CCCC
Q 046008 1019 EDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDD-VY--G--GFGG 1093 (1624)
Q Consensus 1019 ~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~-~y--~--g~~G 1093 (1624)
.......+.++ +...+-......++..+ ....++.++..+++..+.... .+ . .+.+
T Consensus 124 ~~~~~~s~~~~----------------~~~~~g~~~~~~~~~p~---~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~ 184 (367)
T 1i8t_A 124 GDKVPENLEEQ----------------AISLVGEDLYQALIKGY---TEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSD 184 (367)
T ss_dssp CCCCCCSHHHH----------------HHHHHHHHHHHHHTHHH---HHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCC
T ss_pred CCCCCccHHHH----------------HHHHHhHHHHHHHHHHH---HhhhhCCChHHcCHHHHhhceeeeccccccccc
Confidence 00000111111 11111111111222222 222245566666654331100 00 0 1223
Q ss_pred cc-ccccchHHHHHHHHhhhccccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhhhhhhcccCC
Q 046008 1094 AH-CMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESIMFS 1172 (1624)
Q Consensus 1094 ~~-~~VkGGm~sLveALAe~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~vLk~~~I~F~ 1172 (1624)
.+ .+++||+++|+++|+++.+|++|++|++|.. .| .+.||+||+|+|+..+...
T Consensus 185 ~~~~~p~gG~~~l~~~l~~g~~i~l~~~V~~i~~------------~v--------~~~~D~VV~a~p~~~~~~~----- 239 (367)
T 1i8t_A 185 RYQGIPVGGYTKLIEKMLEGVDVKLGIDFLKDKD------------SL--------ASKAHRIIYTGPIDQYFDY----- 239 (367)
T ss_dssp SEEECBTTCHHHHHHHHHTTSEEECSCCGGGSHH------------HH--------HTTEEEEEECSCHHHHTTT-----
T ss_pred hhhcccCCCHHHHHHHHhcCCEEEeCCceeeech------------hh--------hccCCEEEEeccHHHHHHH-----
Confidence 33 2789999999999999989999999988853 12 2468999999999876421
Q ss_pred CCCcHHHHHHHHhcCCccEEEEEEEeCCccc
Q 046008 1173 PPLPQWKYSAIQRLGFGVLNKVVLEFAEVFW 1203 (1624)
Q Consensus 1173 P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW 1203 (1624)
.+..+.|.++..+++.|+...+
T Consensus 240 ---------~l~~l~y~s~~~v~~~~d~~~~ 261 (367)
T 1i8t_A 240 ---------RFGALEYRSLKFETERHEFPNF 261 (367)
T ss_dssp ---------TTCCCCEEEEEEEEEEESSSCS
T ss_pred ---------hhCCCCCceEEEEEEEeccccC
Confidence 2346888888888999987644
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.78 E-value=7.3e-19 Score=211.23 Aligned_cols=245 Identities=18% Similarity=0.236 Sum_probs=140.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccC-CCccc-cccceeecccccchhhhccCCcHHHHH
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTS-LSVPV-DLGASIITGVEADVATERRADPSSLVC 938 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~-~g~~~-d~Ga~~I~g~~~~v~~~~~~nPl~~Ll 938 (1624)
.++|+|||||++||+||++|+++|++|+|||+++++||++++.... .|+.+ +.|++++...++. +..++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~---------~~~~~ 73 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNET---------VWNYV 73 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHH---------HHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHH---------HHHHH
Confidence 3689999999999999999999999999999999999999997753 47775 9999999865433 34578
Q ss_pred HHhCCceeeecCCCCeeeccCCcc--cCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhhccC
Q 046008 939 AQLGLELTVLNSDCPLYDIVSGQK--VPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGR 1016 (1624)
Q Consensus 939 keLGLel~~l~~~~~~yd~~~Gk~--vp~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~~~~ 1016 (1624)
.++|+.. .. ....+...+|.. +|..... + ..++. . . ....+.... +.. ...
T Consensus 74 ~~l~~~~-~~--~~~~~~~~~g~~~~~P~~~~~-~----~~l~~-------~---~---~~~~~~~~~-l~~-----~~~ 126 (384)
T 2bi7_A 74 NKHAEMM-PY--VNRVKATVNGQVFSLPINLHT-I----NQFFS-------K---T---CSPDEARAL-IAE-----KGD 126 (384)
T ss_dssp HTTSCEE-EC--CCCEEEEETTEEEEESCCHHH-H----HHHTT-------C---C---CCHHHHHHH-HHH-----HSC
T ss_pred HHHhhhc-cc--ccceEEEECCEEEECCCChhH-H----HHHhc-------c---c---CCHHHHHHH-HHH-----hhh
Confidence 8888622 11 112233345653 3433221 1 11100 0 0 001111100 000 000
Q ss_pred CcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhccccccccccccccccc-----ccCCC
Q 046008 1017 GREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDD-----VYGGF 1091 (1624)
Q Consensus 1017 ~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~-----~y~g~ 1091 (1624)
.. ......+.++ +...+-......++..+. ...++.++..+++..+.... ....+
T Consensus 127 ~~-~~~~~sl~e~----------------~~~~~g~~~~~~~~~p~~---~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~ 186 (384)
T 2bi7_A 127 ST-IADPQTFEEE----------------ALRFIGKELYEAFFKGYT---IKQWGMQPSELPASILKRLPVRFNYDDNYF 186 (384)
T ss_dssp CS-CSSCCBHHHH----------------HHHHHCHHHHHHHTHHHH---HHHHSSCGGGSBGGGCCSCCCCSSSCCCSC
T ss_pred cc-CCCCcCHHHH----------------HHHhhcHHHHHHHHHHHH---HHHhCCCHHHhCHHHHhccccccccccccc
Confidence 00 0000111111 111111122222222222 22234555566544321000 00112
Q ss_pred CCccc-cccchHHHHHHHHhhh--ccccccceEE-EEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhhhhhh
Q 046008 1092 GGAHC-MIKGGYSTVVEALGKE--LLIHHNHVVT-DISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAE 1167 (1624)
Q Consensus 1092 ~G~~~-~VkGGm~sLveALAe~--L~IrLNt~Vt-rI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~vLk~~ 1167 (1624)
.+.+. +++||+++|+++|++. .+|++|++|+ +|.. .||+||+|+|+..+...
T Consensus 187 ~~~~~~~p~gG~~~l~~~l~~~~g~~I~l~~~V~~~i~~------------------------~~d~VI~a~p~~~~~~~ 242 (384)
T 2bi7_A 187 NHKFQGMPKCGYTQMIKSILNHENIKVDLQREFIVEERT------------------------HYDHVFYSGPLDAFYGY 242 (384)
T ss_dssp CCSEEEEETTHHHHHHHHHHCSTTEEEEESCCCCGGGGG------------------------GSSEEEECSCHHHHTTT
T ss_pred cccccEEECcCHHHHHHHHHhcCCCEEEECCeeehhhhc------------------------cCCEEEEcCCHHHHHHh
Confidence 33442 8899999999999984 4899999998 7742 18999999999976531
Q ss_pred cccCCCCCcHHHHHHHHhcCCccEEEEEEEeC
Q 046008 1168 SIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFA 1199 (1624)
Q Consensus 1168 ~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~ 1199 (1624)
.+..+.|.++..+++.|+
T Consensus 243 --------------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 243 --------------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp --------------TTCCCCEEEEEEEEEEEE
T ss_pred --------------hcCCCCcceEEEEEEEeC
Confidence 134688988888888886
No 29
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.75 E-value=1.9e-17 Score=202.82 Aligned_cols=390 Identities=10% Similarity=0.068 Sum_probs=200.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCC-cc---------------ccccceeeccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLS-VP---------------VDLGASIITGVEA 923 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g-~~---------------~d~Ga~~I~g~~~ 923 (1624)
..++|||||||++||+||++|+++|++|+|||+++++||+++++... | +. ++.|.+|+.+..+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~-g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P 88 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLS-QLYEKFKQNPISKEERESKFGKDRDWNVDLIP 88 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHH-HHHHHHCSSCCCHHHHHHHHCCGGGCCEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceecc-chhceeccCCccccCcchhcccccceeecccc
Confidence 45799999999999999999999999999999999999999997643 2 11 5667777666554
Q ss_pred chhhhccCCcHHHHHHHhCCceee--ecCCCCeeeccCCccc--CcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHH
Q 046008 924 DVATERRADPSSLVCAQLGLELTV--LNSDCPLYDIVSGQKV--PANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLE 999 (1624)
Q Consensus 924 ~v~~~~~~nPl~~LlkeLGLel~~--l~~~~~~yd~~~Gk~v--p~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sle 999 (1624)
..+. ...++..++.++|+.... ...+ ..|.+.+|..+ |......+...+..+++. ..+.
T Consensus 89 ~~l~--~~~~l~~ll~~lg~~~~l~~~~~~-~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~--------------~~~~ 151 (453)
T 2bcg_G 89 KFLM--ANGELTNILIHTDVTRYVDFKQVS-GSYVFKQGKIYKVPANEIEAISSPLMGIFEK--------------RRMK 151 (453)
T ss_dssp CBEE--TTSHHHHHHHHHTGGGTCCEEECC-CEEEEETTEEEECCSSHHHHHHCTTSCHHHH--------------HHHH
T ss_pred ceee--cCcHHHHHHHhcCCccceEEEEcc-ceeEEeCCeEEECCCChHHHHhhhccchhhH--------------HHHH
Confidence 3321 235677899999985321 1222 45555566533 333111111111111100 0011
Q ss_pred HHHHHHHHHHHHhhccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhh-hccccccccc
Q 046008 1000 DGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEY-GCAALLKEVS 1078 (1624)
Q Consensus 1000 d~Le~~lk~~r~~~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley-~~ga~l~~vS 1078 (1624)
.++... ...... .+.. +... . ....+..+++.+..+++..+.++.+.+..... .+...+....
T Consensus 152 ~~~~~~---~~~~~~----~p~~-------~~~~-~-~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~ 215 (453)
T 2bcg_G 152 KFLEWI---SSYKED----DLST-------HQGL-D-LDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPS 215 (453)
T ss_dssp HHHHHH---HHCBTT----BGGG-------STTC-C-TTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHH
T ss_pred HHHHHH---HHhccC----Cchh-------hhcc-c-cccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHH
Confidence 111110 000000 0000 0000 0 00111122344456677777766443221000 0001111111
Q ss_pred c---ccc-ccccccCCCCCccccccchHHHHHHHHhhhc-----cccccceEEEEEecCCCCCCCCCCCcE-EEEeCCCc
Q 046008 1079 L---PFW-NQDDVYGGFGGAHCMIKGGYSTVVEALGKEL-----LIHHNHVVTDISYSFKDSDLSDGQSRV-KVSTSNGS 1148 (1624)
Q Consensus 1079 l---~~~-~~~~~y~g~~G~~~~VkGGm~sLveALAe~L-----~IrLNt~VtrI~~~~~~~~~s~~~~~V-~V~TadGe 1148 (1624)
+ ..+ .....|+ .+.+.++.||++.|+++|++.+ +|++|++|++|.... +++++ .|++ +|+
T Consensus 216 ~~~~~~~~~s~~~~~--~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~-------~~~~~~~V~~-~g~ 285 (453)
T 2bcg_G 216 FERILLYCQSVARYG--KSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKK-------DTGKFEGVKT-KLG 285 (453)
T ss_dssp HHHHHHHHHHHHHHS--SCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEET-------TTTEEEEEEE-TTE
T ss_pred HHHHHHHHHHHHhhc--CCceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEEC-------CCCeEEEEEE-CCe
Confidence 1 111 0000111 2345588999999999998765 799999999998730 03444 5666 588
Q ss_pred EEEcCEEEEccChhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccc-cCCCccc--cccccccCCCCceeE
Q 046008 1149 EFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFW-DDTVDYF--GATAKETDLRGRCFM 1225 (1624)
Q Consensus 1149 ti~AD~VIsAiP~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW-~~~~~~f--G~~~~~~~~rg~~~~ 1225 (1624)
++.||+||+|+++..- .+.+++- .....++.++.++- ......+ -+..........+|+
T Consensus 286 ~~~ad~VV~a~~~~~~-----------------~l~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v 347 (453)
T 2bcg_G 286 TFKAPLVIADPTYFPE-----------------KCKSTGQ-RVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYV 347 (453)
T ss_dssp EEECSCEEECGGGCGG-----------------GEEEEEE-EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEE
T ss_pred EEECCEEEECCCccch-----------------hhcccCC-cceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEE
Confidence 9999999999987510 0111110 23333444676542 1111111 111111122233443
Q ss_pred Eec----cccCCCCcEEEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEE-EeecCCCCCCcccccccC
Q 046008 1226 FWN----VRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASV-VTDWGRDPFSYGAYSYVA 1300 (1624)
Q Consensus 1226 ~~n----~~ap~G~~vLvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~iv-vtrW~~dp~s~GsYs~~~ 1300 (1624)
... ..+|+|+.++.+++..+. .+.++-++.+++. +.|. ...+. +.+ .|. +
T Consensus 348 ~~~s~~d~~aP~G~~~~~v~~~~~~------~~~~~~l~~~~~~---l~~~-----~~~~~~~~~---------~~~--~ 402 (453)
T 2bcg_G 348 AIVSDAHNVCSKGHYLAIISTIIET------DKPHIELEPAFKL---LGPI-----EEKFMGIAE---------LFE--P 402 (453)
T ss_dssp EEEEGGGTSSCTTCEEEEEEEECCS------SCHHHHTHHHHGG---GCSC-----SEEEEEEEE---------EEE--E
T ss_pred EEeCCCCCCCCCCcEEEEEEEecCC------CCHHHHHHHHHHH---hhhH-----HHhhccchh---------eee--e
Confidence 322 236788888888876543 2233333344333 3221 11111 111 111 1
Q ss_pred CCCCCchhhhhCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHH
Q 046008 1301 TGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRII 1349 (1624)
Q Consensus 1301 pG~~~~~~d~L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL 1349 (1624)
.+ ...-.| ||++|++... ..+++|+.++.+++.+|.
T Consensus 403 ~~---------~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 403 RE---------DGSKDN-IYLSRSYDAS---SHFESMTDDVKDIYFRVT 438 (453)
T ss_dssp SS---------CSTTTS-EEECCCCCSC---SBSHHHHHHHHHHHHHHH
T ss_pred cC---------CCCCCC-EEECCCCCcc---ccHHHHHHHHHHHHHHHH
Confidence 10 112245 9999996543 237999999999999987
No 30
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.73 E-value=5.3e-17 Score=195.91 Aligned_cols=256 Identities=15% Similarity=0.109 Sum_probs=146.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCcc-ccccceeecccccchhhhccCCcHHHH
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVP-VDLGASIITGVEADVATERRADPSSLV 937 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~-~d~Ga~~I~g~~~~v~~~~~~nPl~~L 937 (1624)
...++|+|||||++||+||++|+++|++|+|||+++++||++++.....|+. ++.|+|++..... .+..+
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~---------~~~~~ 97 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSK---------DVFEY 97 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCH---------HHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChH---------HHHHH
Confidence 3568999999999999999999999999999999999999999876334776 4999999985433 24568
Q ss_pred HHHhCCceeeecCCCCeeeccCCcccCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhhccCC
Q 046008 938 CAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGRG 1017 (1624)
Q Consensus 938 lkeLGLel~~l~~~~~~yd~~~Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~~~~~ 1017 (1624)
++++|.... .....+...+|+.++....... +..++.. ........ ..+.. ...
T Consensus 98 ~~~~~~~~~---~~~~~~~~~~g~l~~lP~~~~~---~~~l~~~-------------~~~~~~~~-~~l~~----~~~-- 151 (397)
T 3hdq_A 98 LSRFTEWRP---YQHRVLASVDGQLLPIPINLDT---VNRLYGL-------------NLTSFQVE-EFFAS----VAE-- 151 (397)
T ss_dssp HHTSCCEEE---CCCBEEEEETTEEEEESCCHHH---HHHHHTC-------------CCCHHHHH-HHHHH----HCC--
T ss_pred HHHhhhccc---ccccceEEECCEEEEcCCChHH---HHHhhcc-------------CCCHHHHH-HHHhh----ccc--
Confidence 888885321 1223344456754433222110 1111100 00000000 00000 000
Q ss_pred cccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccccccCC-----CC
Q 046008 1018 REDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGG-----FG 1092 (1624)
Q Consensus 1018 ~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~g-----~~ 1092 (1624)
.......+.+++.. .+-......++..+ +.-.++..+..+++..+........ +.
T Consensus 152 -~~~~~~s~~e~~~~----------------~~G~~~~e~~~~py---~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~ 211 (397)
T 3hdq_A 152 -KVEQVRTSEDVVVS----------------KVGRDLYNKFFRGY---TRKQWGLDPSELDASVTARVPTRTNRDNRYFA 211 (397)
T ss_dssp -CCSSCCBHHHHHHH----------------HHHHHHHHHHTHHH---HHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCC
T ss_pred -CCCCCcCHHHHHHH----------------hcCHHHHHHHHHHH---hCchhCCCHHHHHHHHHHhcCcccccCccchh
Confidence 00001111111111 11111111222222 2222445666666543221111111 22
Q ss_pred Ccc-ccccchHHHHHHHHhh--hccccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhhhhhhcc
Q 046008 1093 GAH-CMIKGGYSTVVEALGK--ELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESI 1169 (1624)
Q Consensus 1093 G~~-~~VkGGm~sLveALAe--~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~vLk~~~I 1169 (1624)
+.+ .++.||+++|+++|++ +++|++|++|++| +.++.||+||+|+|+..+..
T Consensus 212 ~~~qg~P~gGy~~l~e~l~~~~g~~V~l~~~v~~~----------------------~~~~~~d~vI~T~P~d~~~~--- 266 (397)
T 3hdq_A 212 DTYQAMPLHGYTRMFQNMLSSPNIKVMLNTDYREI----------------------ADFIPFQHMIYTGPVDAFFD--- 266 (397)
T ss_dssp CSEEEEETTCHHHHHHHHTCSTTEEEEESCCGGGT----------------------TTTSCEEEEEECSCHHHHTT---
T ss_pred hhheeccCCCHHHHHHHHHhccCCEEEECCeEEec----------------------cccccCCEEEEcCCHHHHHH---
Confidence 233 3689999999999998 4589999988633 23456899999999987631
Q ss_pred cCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccC
Q 046008 1170 MFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDD 1205 (1624)
Q Consensus 1170 ~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~ 1205 (1624)
+ .+..|.|.++..+++.|+...+..
T Consensus 267 -~----------~~g~L~yrsl~~~~~~~~~~~~~~ 291 (397)
T 3hdq_A 267 -F----------CYGKLPYRSLEFRHETHDTEQLLP 291 (397)
T ss_dssp -T----------TTCCCCEEEEEEEEEEESSSCSCS
T ss_pred -H----------hcCCCCCceEEEEEEEeccccCCC
Confidence 1 245678889999999998765544
No 31
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.67 E-value=9.2e-15 Score=157.97 Aligned_cols=58 Identities=34% Similarity=0.582 Sum_probs=51.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeec
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIIT 919 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~ 919 (1624)
..+|+|||||||||+||++|+++|++|+||||++++||++++.... +..+|+|+.++.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~-~~~~d~g~~~~~ 59 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSD-AGALDMGAQYFT 59 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEET-TEEEECSCCCBC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccC-CceeecCccccc
Confidence 5789999999999999999999999999999999999999987763 677888776554
No 32
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.67 E-value=1.5e-15 Score=185.03 Aligned_cols=250 Identities=12% Similarity=0.083 Sum_probs=138.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccc-cC-------------------CCccccccceeec
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDR-TS-------------------LSVPVDLGASIIT 919 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~-~~-------------------~g~~~d~Ga~~I~ 919 (1624)
..++|+|||||++||+||++|+++|++|+|||+++++||+++++. .. .++.+|+|++++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 457999999999999999999999999999999999999999987 10 2345566666554
Q ss_pred ccccchhhhccCCcHHHHHHHhCCceee--ecCCCCeeeccCCcc--cCcchHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 046008 920 GVEADVATERRADPSSLVCAQLGLELTV--LNSDCPLYDIVSGQK--VPANVDEALEAEFNSLLDDMVLLVAQKGEHAMK 995 (1624)
Q Consensus 920 g~~~~v~~~~~~nPl~~LlkeLGLel~~--l~~~~~~yd~~~Gk~--vp~~l~~~l~~~~~slld~l~~~~~~~g~~a~~ 995 (1624)
.. .++..+++++|+.... ...+ ..|.+.+|.. +|......+...+..+++.
T Consensus 85 ~~----------~~l~~ll~~lgl~~~l~~~~~~-~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~-------------- 139 (433)
T 1d5t_A 85 AN----------GQLVKMLLYTEVTRYLDFKVVE-GSFVYKGGKIYKVPSTETEALASNLMGMFEK-------------- 139 (433)
T ss_dssp TT----------SHHHHHHHHHTGGGGCCEEECC-EEEEEETTEEEECCCSHHHHHHCSSSCHHHH--------------
T ss_pred cc----------chHHHHHHHcCCccceEEEEeC-ceEEeeCCEEEECCCCHHHHhhCcccChhhH--------------
Confidence 31 4566799999986321 2222 3444456653 3333212111111111100
Q ss_pred ccHHHHHHHHHHHHHHhhccCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccc
Q 046008 996 MSLEDGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLK 1075 (1624)
Q Consensus 996 ~sled~Le~~lk~~r~~~~~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~ 1075 (1624)
..+..++... ..+... .+. ..+.+. ....+..+++.+..+++..+.++...++. + .+..+.
T Consensus 140 ~~~~~~~~~~---~~~~~~----~p~----~~~~~~-----~~~~s~~~~l~~~~~~~~l~~~l~~~~~~--~-~~~~~~ 200 (433)
T 1d5t_A 140 RRFRKFLVFV---ANFDEN----DPK----TFEGVD-----PQNTSMRDVYRKFDLGQDVIDFTGHALAL--Y-RTDDYL 200 (433)
T ss_dssp HHHHHHHHHH---HHCCTT----CGG----GGTTCC-----TTTSBHHHHHHHTTCCHHHHHHHHHHTSC--C-SSSGGG
T ss_pred HHHHHHHHHH---Hhhccc----Cch----hccccc-----cccCCHHHHHHHcCCCHHHHHHHHHHHHh--c-cCCCcc
Confidence 0011111110 000000 000 000000 00111122444556777777766543211 1 111111
Q ss_pred cccc----cccccc-cccCCC-CCccccccchHHHHHHHHhhhc-----cccccceEEEEEecCCCCCCCCCCCcEEEEe
Q 046008 1076 EVSL----PFWNQD-DVYGGF-GGAHCMIKGGYSTVVEALGKEL-----LIHHNHVVTDISYSFKDSDLSDGQSRVKVST 1144 (1624)
Q Consensus 1076 ~vSl----~~~~~~-~~y~g~-~G~~~~VkGGm~sLveALAe~L-----~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~T 1144 (1624)
..+. ..+..+ .....+ .+.++++.||++.|+++|++.+ +|++|++|++|... ++++.+++
T Consensus 201 ~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~---------~~~v~~v~ 271 (433)
T 1d5t_A 201 DQPCLETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME---------NGKVVGVK 271 (433)
T ss_dssp GSBSHHHHHHHHHHHHSCCSSSCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE---------TTEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEe---------CCEEEEEE
Confidence 1111 100000 001112 2346689999999999998755 79999999999883 34555333
Q ss_pred CCCcEEEcCEEEEccChh
Q 046008 1145 SNGSEFSGDAVLITVPLG 1162 (1624)
Q Consensus 1145 adGeti~AD~VIsAiP~~ 1162 (1624)
.+|+++.||+||+|+|+.
T Consensus 272 ~~g~~~~ad~VV~a~~~~ 289 (433)
T 1d5t_A 272 SEGEVARCKQLICDPSYV 289 (433)
T ss_dssp ETTEEEECSEEEECGGGC
T ss_pred ECCeEEECCEEEECCCCC
Confidence 578899999999999976
No 33
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.67 E-value=2.8e-17 Score=178.19 Aligned_cols=132 Identities=20% Similarity=0.246 Sum_probs=105.4
Q ss_pred CCC-cEEEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCc-eE--EEeecCCCCCCcccccccCCCCCCchh
Q 046008 1233 VGA-PVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPV-AS--VVTDWGRDPFSYGAYSYVATGASGEDY 1308 (1624)
Q Consensus 1233 ~G~-~vLvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi-~i--vvtrW~~dp~s~GsYs~~~pG~~~~~~ 1308 (1624)
++. .+|++|++|..+..+..++++++++.++++|+++||.. + .+. .+ ++++|..+||++|+|++++||+...++
T Consensus 33 ~g~~~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~-~-~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~ 110 (181)
T 2e1m_C 33 TQGGVVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRR-I-EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFH 110 (181)
T ss_dssp CSCEEEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGG-G-GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHH
T ss_pred CCCCEEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCC-c-HhhccCcceecccCCCCCCCCcccCcCCCchHHHH
Confidence 444 68999999999999999999999999999999999754 3 444 67 899999999999999999999887788
Q ss_pred hhhCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHccCCCCchhHHHHHHh
Q 046008 1309 DILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGNDFTAEVEAMEAA 1368 (1624)
Q Consensus 1309 d~L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~~~~~~~~~~~l~~~ 1368 (1624)
+.+++|+++ ||||||+|+. |.|||+||+.||.|||.+|+..++.......++..++++
T Consensus 111 ~~l~~p~gr-l~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~~~~~~p~~~~~~~ 168 (181)
T 2e1m_C 111 LDVVRPEGP-VYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPVGDTGVTAAAGRRGAA 168 (181)
T ss_dssp HHHHSCBTT-EEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC---------------
T ss_pred HHHhCCCCc-EEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhccCCCCCCCcccccCC
Confidence 899999865 9999999996 999999999999999999999997654444555444443
No 34
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.62 E-value=5.4e-15 Score=177.21 Aligned_cols=82 Identities=35% Similarity=0.518 Sum_probs=69.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc-ccCCCccccccc---------CCCccccccceeecccccchhhh
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR-NRIGGRVYTDRT---------SLSVPVDLGASIITGVEADVATE 928 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~-~~~GG~~~s~~~---------~~g~~~d~Ga~~I~g~~~~v~~~ 928 (1624)
...++|+|||||++||+||+.|+++|++|+|||++ +++||++++... ..++.+++|++++...+.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~----- 116 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHP----- 116 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCH-----
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHH-----
Confidence 45789999999999999999999999999999999 999999999873 247889999999865432
Q ss_pred ccCCcHHHHHHHhCCceeeec
Q 046008 929 RRADPSSLVCAQLGLELTVLN 949 (1624)
Q Consensus 929 ~~~nPl~~LlkeLGLel~~l~ 949 (1624)
.+..+++++|+....+.
T Consensus 117 ----~~~~~~~~lGl~~~~~~ 133 (376)
T 2e1m_A 117 ----LTLALIDKLGLKRRLFF 133 (376)
T ss_dssp ----HHHHHHHHTTCCEEEEC
T ss_pred ----HHHHHHHHcCCCcceee
Confidence 24568999999877654
No 35
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.47 E-value=6.5e-14 Score=172.37 Aligned_cols=250 Identities=15% Similarity=0.107 Sum_probs=136.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccC-------------------CCccccccceeec
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTS-------------------LSVPVDLGASIIT 919 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~-------------------~g~~~d~Ga~~I~ 919 (1624)
...++|+|||||++|+++|+.|+++|++|+|+|+++++||++.+.... .+|.+|++++++.
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~ 97 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFIL 97 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEE
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEee
Confidence 356899999999999999999999999999999999999999887532 1356777777765
Q ss_pred ccccchhhhccCCcHHHHHHHhCCceeeecC-CCCeeecc---------CCc--ccCcchHHHHHHHHHHHHHHHHHHHH
Q 046008 920 GVEADVATERRADPSSLVCAQLGLELTVLNS-DCPLYDIV---------SGQ--KVPANVDEALEAEFNSLLDDMVLLVA 987 (1624)
Q Consensus 920 g~~~~v~~~~~~nPl~~LlkeLGLel~~l~~-~~~~yd~~---------~Gk--~vp~~l~~~l~~~~~slld~l~~~~~ 987 (1624)
.. .++..++.++|+.....+. -...|.+. .|+ .+|......+......+.++.
T Consensus 98 ~~----------g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~----- 162 (475)
T 3p1w_A 98 VG----------GNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKN----- 162 (475)
T ss_dssp TT----------SHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHH-----
T ss_pred cC----------cHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHH-----
Confidence 32 3456688888886543331 12233332 232 334433332221111111111
Q ss_pred HhhhhhhhccHHHHHHHHHHHHHHhhccCCcccccccchhhHhhcccCCC-CCCCCcccchhccCCHHHHHHHHHHHHhh
Q 046008 988 QKGEHAMKMSLEDGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVD-SRVPDKDCSREDILSPVERRVMDWHFANL 1066 (1624)
Q Consensus 988 ~~g~~a~~~sled~Le~~lk~~r~~~~~~~~~~~~~~~a~d~fs~~~~i~-~~~p~~d~l~e~~Lsp~~r~lL~~~~a~l 1066 (1624)
.+..++.+. .++....+ . .+. .++ ...+..+++....+++..+.++.+.++
T Consensus 163 ---------~l~kFL~~l---~~~~~~~~--~---------~~~---~~~l~~~s~~e~l~~~gls~~l~~fl~~ala-- 214 (475)
T 3p1w_A 163 ---------RCKNFYQYV---SEWDANKR--N---------TWD---NLDPYKLTMLEIYKHFNLCQLTIDFLGHAVA-- 214 (475)
T ss_dssp ---------HHHHHHHHH---HHCCTTCG--G---------GST---TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTS--
T ss_pred ---------HHHHHHHHH---Hhhhhccc--h---------hhh---cccccCCCHHHHHHHcCCCHHHHHHHHHHHH--
Confidence 011111110 00000000 0 000 000 001111233333445544443311111
Q ss_pred hhhccccccccccc--------ccccccccCCCCCccccccchHHHHHHHHhhhc-----cccccceEEEEEecCCCCCC
Q 046008 1067 EYGCAALLKEVSLP--------FWNQDDVYGGFGGAHCMIKGGYSTVVEALGKEL-----LIHHNHVVTDISYSFKDSDL 1133 (1624)
Q Consensus 1067 ey~~ga~l~~vSl~--------~~~~~~~y~g~~G~~~~VkGGm~sLveALAe~L-----~IrLNt~VtrI~~~~~~~~~ 1133 (1624)
+.........++. +......|+ ...+.++.||++.|+++|++.+ +|++|++|++|..+.
T Consensus 215 -L~~~~~~~~~~a~~~l~ri~~y~~Sl~~yg--~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~----- 286 (475)
T 3p1w_A 215 -LYLNDDYLKQPAYLTLERIKLYMQSISAFG--KSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDD----- 286 (475)
T ss_dssp -CCSSSGGGGSBHHHHHHHHHHHHHHHHHHS--SCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECT-----
T ss_pred -hhcCCCcccCCHHHHHHHHHHHHHHHhhcC--CCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEec-----
Confidence 0000000001110 000001121 2355679999999999998765 799999999999831
Q ss_pred CCCCCcEEEEeCCCcEEEcCEEEEccCh
Q 046008 1134 SDGQSRVKVSTSNGSEFSGDAVLITVPL 1161 (1624)
Q Consensus 1134 s~~~~~V~V~TadGeti~AD~VIsAiP~ 1161 (1624)
++..+.|++.+|+++.||+||+|...
T Consensus 287 --~g~v~gV~~~~G~~i~Ad~VI~a~~~ 312 (475)
T 3p1w_A 287 --DNKVCGIKSSDGEIAYCDKVICDPSY 312 (475)
T ss_dssp --TSCEEEEEETTSCEEEEEEEEECGGG
T ss_pred --CCeEEEEEECCCcEEECCEEEECCCc
Confidence 34457799999999999999999864
No 36
>2dce_A KIAA1915 protein; swirm domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=5.8e-14 Score=139.45 Aligned_cols=93 Identities=20% Similarity=0.239 Sum_probs=81.5
Q ss_pred cccccceeccCcccccCchhhcchhHHHhcC--CCccchhhhhhHHHHhhcCCCccCCcccccCCCCCCCCCCCChhhHH
Q 046008 606 NTGAAAVAVGLKARAAGPIERIKFKEILKRR--GGLQEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRASLI 683 (1624)
Q Consensus 606 ~~~~aa~~~~l~~~~~~~~e~~~~~~~~~~~--~~~~~~l~~rn~~l~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 683 (1624)
...+.+.+.-+++++++++|+.+|||+..++ .+...||.+||.|+++|..||+..|++++|-....+ ..+..++
T Consensus 12 ~~~iP~~~~wf~~~~ih~iEk~~lPefF~g~~~ktpe~Yl~iRN~iI~~yr~np~~yLT~t~~rr~L~~----~gDv~~i 87 (111)
T 2dce_A 12 ELKPPEQEIEIDRNIIQEEEKQAIPEFFEGRQAKTPERYLKIRNYILDQWEICKPKYLNKTSVRPGLKN----CGDVNCI 87 (111)
T ss_dssp SCCCCSSCCCCCSSCCCHHHHTTSGGGGSCCSSCCHHHHHHHHHHHHHHHHHHTTSCCCGGGTTTTTSS----SSCHHHH
T ss_pred CCcCCCcccccCcccCCHHHHHhChHHhcCCcccCHHHHHHHHHHHHHHHHhCCcceeeHHHHHHhccc----ccCHHHH
Confidence 4456677899999999999999999999874 566789999999999999999999999999865542 2567899
Q ss_pred HHHHHhhcccCceeeecCC
Q 046008 684 REIYKFLDQSGYINVGIAS 702 (1624)
Q Consensus 684 ~~~~~~l~~~g~in~g~~~ 702 (1624)
.+||.|||++|+||||+.+
T Consensus 88 ~RVh~FLe~wGLIN~~~~~ 106 (111)
T 2dce_A 88 GRIHTYLELIGAINFGCEQ 106 (111)
T ss_dssp HHHHHHHHHHSSSSCSCTT
T ss_pred HHHHHHHHHcCeeecCCCh
Confidence 9999999999999999875
No 37
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=99.40 E-value=3.4e-14 Score=139.05 Aligned_cols=88 Identities=19% Similarity=0.250 Sum_probs=74.4
Q ss_pred ccceeccCcccccCchhhcchhHHHhcC---CCccchhhhhhHHHHhhcCCCccCCcccccCCCCCCCCCCCChhhHHHH
Q 046008 609 AAAVAVGLKARAAGPIERIKFKEILKRR---GGLQEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRASLIRE 685 (1624)
Q Consensus 609 ~aa~~~~l~~~~~~~~e~~~~~~~~~~~---~~~~~~l~~rn~~l~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 685 (1624)
+...+..++.++++++|+.+|||+..++ .+...||++||.||++|..||+..|++++|-... ..+..++.+
T Consensus 13 ~p~~s~wF~~~~Ih~iEk~~lPEfF~g~~~~ktpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l------~gDv~~i~R 86 (104)
T 2fq3_A 13 ASSYSKWFNLEKIHSIEVQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNV------SGDAAALFR 86 (104)
T ss_dssp ----CTTCCTTCCCHHHHHHCGGGCCSSCTTSCHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHS------CSCHHHHHH
T ss_pred CCCcccccCcccCCHHHHHHChHHhcCCCCCCCHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHc------cccHHHHHH
Confidence 4556889999999999999999999975 4566899999999999999999999999998544 246789999
Q ss_pred HHHhhcccCceeeecCC
Q 046008 686 IYKFLDQSGYINVGIAS 702 (1624)
Q Consensus 686 ~~~~l~~~g~in~g~~~ 702 (1624)
||+|||+.|+|||||.+
T Consensus 87 Vh~FLe~wGLIN~~v~~ 103 (104)
T 2fq3_A 87 LHKFLTKWGLINYQVDS 103 (104)
T ss_dssp HHHHHHHTTSSSSCC--
T ss_pred HHHHHHHcCeeccCCCC
Confidence 99999999999999864
No 38
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.30 E-value=7.3e-11 Score=149.54 Aligned_cols=88 Identities=11% Similarity=0.073 Sum_probs=64.5
Q ss_pred CccccccchHHHHHHHHhhhc-----cccccceEEEEEecCCCCCCCCC-CCcEEEEeCCCcEEEcCEEEEccChhhhhh
Q 046008 1093 GAHCMIKGGYSTVVEALGKEL-----LIHHNHVVTDISYSFKDSDLSDG-QSRVKVSTSNGSEFSGDAVLITVPLGCLKA 1166 (1624)
Q Consensus 1093 G~~~~VkGGm~sLveALAe~L-----~IrLNt~VtrI~~~~~~~~~s~~-~~~V~V~TadGeti~AD~VIsAiP~~vLk~ 1166 (1624)
++++++.||++.|+++|++.+ .|++|++|.+|.++. + +..+.|++.+|+++.||+||++ +..+.
T Consensus 368 sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~-------~~g~v~gV~~~~Ge~i~A~~VVs~--~~~lp- 437 (650)
T 1vg0_A 368 TPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDK-------ESRKCKAVIDQFGQRIISKHFIIE--DSYLS- 437 (650)
T ss_dssp SSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEET-------TTCCEEEEEETTSCEEECSEEEEE--GGGBC-
T ss_pred CceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeC-------CCCeEEEEEeCCCCEEEcCEEEEC--hhhcC-
Confidence 467789999999999998765 899999999999841 1 3344566688999999999993 32221
Q ss_pred hcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccc
Q 046008 1167 ESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFW 1203 (1624)
Q Consensus 1167 ~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW 1203 (1624)
+.+ ..++.++.+.++++.++.+.-
T Consensus 438 ------~~~-------~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 438 ------ENT-------CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp ------TTT-------TTTCCCEEEEEEEEEESSCSS
T ss_pred ------HhH-------hccccccceEEEEEEecCCCC
Confidence 111 123456788899999988754
No 39
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.29 E-value=1e-12 Score=169.13 Aligned_cols=123 Identities=22% Similarity=0.296 Sum_probs=101.2
Q ss_pred chhhhhhhhhhhhccccCCCccccccccccccc---cCCCCccccccCCCcC-Chhc---------ccccchhhhhhhhh
Q 046008 781 NEIRQKESVVDDCQQRVDSDPKASNRLVGVDVS---CDDPSCGMVDGGTVPL-TIEE---------RSESERVQSASCDD 847 (1624)
Q Consensus 781 ~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~d~~---~~~~~c~~v~~~r~~l-~p~~---------~~~~~~~~~~~~~~ 847 (1624)
.+.+++...+..+++.+++|+|.++++..++.+ +++|.||+|.++|++| +|.+ ..+.+|+.|++|..
T Consensus 277 ~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~~g~~~~i~~c~~c~~C~~ 356 (690)
T 3k30_A 277 APEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDGRLNLIRECIGCNICVS 356 (690)
T ss_dssp CCTTTTHHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHTTCGGGCCCCCCCCHHHH
T ss_pred CCccccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHHcCCccccccccchhhhhh
Confidence 345666778889999999999999999987765 8889999999999999 9988 34679999999874
Q ss_pred cC----------------CCC-----ccccCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccccc
Q 046008 848 AG----------------ENH-----YLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 848 ~~----------------~~~-----~~~~~~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~ 903 (1624)
.. +.. ....+....++|+|||||++||+||++|+++|++|+|||+.+.+||.+...
T Consensus 357 ~~~~~~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~ 433 (690)
T 3k30_A 357 GDLTMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQE 433 (690)
T ss_dssp HHHTTSCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHH
T ss_pred cccCCCcccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeec
Confidence 31 000 001223456899999999999999999999999999999999999998763
No 40
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.25 E-value=3.2e-12 Score=165.58 Aligned_cols=126 Identities=16% Similarity=0.194 Sum_probs=101.6
Q ss_pred CCchhhhhhhhhhhhccccCCCccccccccccccc---cCCCCccccccCCCcC-Chhc---------ccccchhhhhhh
Q 046008 779 LPNEIRQKESVVDDCQQRVDSDPKASNRLVGVDVS---CDDPSCGMVDGGTVPL-TIEE---------RSESERVQSASC 845 (1624)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~d~~---~~~~~c~~v~~~r~~l-~p~~---------~~~~~~~~~~~~ 845 (1624)
+..+..++...+..+++.+++|+|.++++..++.+ +++|.||+|.++|++| +|.+ ..+..|+.|++|
T Consensus 272 ~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~~~~g~~~~~~~ci~Cn~C 351 (729)
T 1o94_A 272 RFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQKVEQGRYDDIRVCIGCNVC 351 (729)
T ss_dssp TTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHHHHTTCGGGCCCCCCCCHH
T ss_pred cccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHHHHcCCccccccccccchh
Confidence 33445666678889999999999999999887766 8889999999999999 9988 335679999988
Q ss_pred hhc-C---------------CCC---c---cccCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccccc
Q 046008 846 DDA-G---------------ENH---Y---LRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 846 ~~~-~---------------~~~---~---~~~~~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~ 903 (1624)
... . ... . ...+....++|+|||||+|||+||++|+++|++|+|||+.+.+||.+...
T Consensus 352 ~~~~~~~~~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~ 431 (729)
T 1o94_A 352 ISRWEIGGPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQV 431 (729)
T ss_dssp HHHHHHSSSCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHH
T ss_pred cccccccCCceeeccCccccccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeec
Confidence 854 1 000 0 01223456899999999999999999999999999999999999998764
Q ss_pred c
Q 046008 904 R 904 (1624)
Q Consensus 904 ~ 904 (1624)
.
T Consensus 432 ~ 432 (729)
T 1o94_A 432 A 432 (729)
T ss_dssp T
T ss_pred c
Confidence 3
No 41
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.08 E-value=4.9e-11 Score=153.16 Aligned_cols=119 Identities=25% Similarity=0.275 Sum_probs=94.9
Q ss_pred hhhhhhhhhhccccCCCccccccccccccc---cCCCCccccccCCCcC-Chhc---------ccccchhhhhh-hhhcC
Q 046008 784 RQKESVVDDCQQRVDSDPKASNRLVGVDVS---CDDPSCGMVDGGTVPL-TIEE---------RSESERVQSAS-CDDAG 849 (1624)
Q Consensus 784 ~~~~~~~~~~~~~v~v~~~~~~~~~~~d~~---~~~~~c~~v~~~r~~l-~p~~---------~~~~~~~~~~~-~~~~~ 849 (1624)
..+...+..+++.+++|+|+++++.+++.+ +++|.||+|.++|+++ +|.+ ..+..|+.|++ |....
T Consensus 266 ~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k~~~g~~~~~~~c~~c~~~C~~~~ 345 (671)
T 1ps9_A 266 GAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINTCIGCNQACLDQI 345 (671)
T ss_dssp TTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTTCGGGCCCCCCCCTTTHHHH
T ss_pred chHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHHHHcCCCCCcccccccccccchhc
Confidence 344566778999999999999999777666 8889999999999999 9987 23456888886 76431
Q ss_pred ----------------CCCccccCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 850 ----------------ENHYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 850 ----------------~~~~~~~~~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
+......+....++|+|||||+|||+||++|+++|++|+|+|+.+.+||.+..
T Consensus 346 ~~~~~~~C~~np~~~~e~~~~~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~ 414 (671)
T 1ps9_A 346 FVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNI 414 (671)
T ss_dssp HTTCCCCCSSCTTTTCTTTSCCCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHH
T ss_pred cCCCceEEEeCcccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeec
Confidence 00011122345689999999999999999999999999999999999998754
No 42
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.08 E-value=8.2e-09 Score=121.48 Aligned_cols=39 Identities=36% Similarity=0.642 Sum_probs=35.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
.+||+||||||+||+||+.|+++|++|+|||+++.+|..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 479999999999999999999999999999998887643
No 43
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.03 E-value=1.3e-08 Score=118.88 Aligned_cols=43 Identities=42% Similarity=0.507 Sum_probs=38.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~ 903 (1624)
.++|+|||||++||+||++|+++|++|+|||+.+.+|+.....
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~ 46 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSR 46 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcC
Confidence 4799999999999999999999999999999998887665443
No 44
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.01 E-value=2.9e-11 Score=124.04 Aligned_cols=107 Identities=20% Similarity=0.322 Sum_probs=69.6
Q ss_pred cEEEcCEEEEccChhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEe
Q 046008 1148 SEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFW 1227 (1624)
Q Consensus 1148 eti~AD~VIsAiP~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~ 1227 (1624)
.+++||+||+|+|+++|+ .|.|.|+||.++.++|++++||..+||++.|+++||+++.. .+.
T Consensus 4 ~~~~Ad~VIvTvP~~vL~--~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~----~gd------------ 65 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLR--FVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEA----DWK------------ 65 (130)
T ss_dssp EEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHH----HHH------------
T ss_pred eEEEcCEEEEcCCHHHHh--cCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCc----ccc------------
Confidence 478999999999999998 59999999999999999999999999999999999987521 110
Q ss_pred ccccCCCCcEEEEEE-eCccccccCCCCHHHHHHHHHHHHHHHhCCC
Q 046008 1228 NVRKTVGAPVLIALV-VGKAAVDGQNVSPSDHVNHAVMVLRQIFGAA 1273 (1624)
Q Consensus 1228 n~~ap~G~~vLvayv-~G~~A~~~e~lSdEElie~aL~~L~kIfG~~ 1273 (1624)
+...+.+..+|++|+ +|..+..|..+++ +..+.++..|..++|+.
T Consensus 66 ~s~~~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~ 111 (130)
T 2e1m_B 66 RELDAIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSV 111 (130)
T ss_dssp HHHHHHSTTHHHHHHHHCCCSCCCC----------------------
T ss_pred ccCCCCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCC
Confidence 000111234788888 5999999999977 66778889999999863
No 45
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.97 E-value=3.7e-08 Score=115.89 Aligned_cols=44 Identities=30% Similarity=0.320 Sum_probs=38.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~ 903 (1624)
...++|+|||||++||+||++|+ +|++|+|||+++.+|+.....
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~ 50 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGR 50 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCcccccccc
Confidence 34689999999999999999999 699999999998898665443
No 46
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.96 E-value=3.7e-08 Score=119.16 Aligned_cols=42 Identities=31% Similarity=0.498 Sum_probs=38.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccccCCCccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARNRIGGRVY 901 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~~~GG~~~ 901 (1624)
..++|+|||||++||+||++|+++|+ +|+|||+....||...
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~ 47 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISA 47 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcc
Confidence 45799999999999999999999999 9999999998887644
No 47
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.86 E-value=2.8e-08 Score=115.43 Aligned_cols=42 Identities=36% Similarity=0.612 Sum_probs=38.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
.++|+|||||++||+||+.|+++|++|+|||+.+.+||.++.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 368999999999999999999999999999999999987553
No 48
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.85 E-value=5.7e-07 Score=106.66 Aligned_cols=51 Identities=20% Similarity=0.163 Sum_probs=41.3
Q ss_pred HHHHHHhhhc--cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChh
Q 046008 1104 TVVEALGKEL--LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLG 1162 (1624)
Q Consensus 1104 sLveALAe~L--~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~ 1162 (1624)
.|.+.|.+.+ .|+++++|+.|... +++.|+|++.||++++||.||-|=...
T Consensus 113 ~L~~~L~~~~~~~v~~~~~v~~~~~~--------~~~~v~v~~~dG~~~~adlvVgADG~~ 165 (412)
T 4hb9_A 113 ELKEILNKGLANTIQWNKTFVRYEHI--------ENGGIKIFFADGSHENVDVLVGADGSN 165 (412)
T ss_dssp HHHHHHHTTCTTTEECSCCEEEEEEC--------TTSCEEEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHhhccceEEEEEEEEeeeEc--------CCCeEEEEECCCCEEEeeEEEECCCCC
Confidence 3555666666 79999999999874 455799999999999999999986653
No 49
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.84 E-value=2.5e-07 Score=110.92 Aligned_cols=38 Identities=42% Similarity=0.576 Sum_probs=34.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
...++|+||||||+||++|+.|+++|++|+|||+.+.+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 45689999999999999999999999999999998755
No 50
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.83 E-value=1.8e-07 Score=112.23 Aligned_cols=36 Identities=42% Similarity=0.697 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||++||+||+.|+++|++|+|||+....
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~ 40 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP 40 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 479999999999999999999999999999997643
No 51
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.79 E-value=9.8e-08 Score=119.06 Aligned_cols=38 Identities=39% Similarity=0.621 Sum_probs=34.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
...+|+||||||+||++|+.|+++|++|+|||+.+.++
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 35799999999999999999999999999999987654
No 52
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.76 E-value=4.6e-07 Score=107.36 Aligned_cols=38 Identities=37% Similarity=0.667 Sum_probs=35.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG 898 (1624)
.++|+|||||++||+||+.|+++|++|+|||+...+|+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 36899999999999999999999999999999987775
No 53
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.76 E-value=8.3e-08 Score=113.44 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=35.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCC
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGG 898 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG 898 (1624)
...++|+|||||++||+||++|+++|++|+|||+....||
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 4568999999999999999999999999999999865544
No 54
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.75 E-value=2.7e-06 Score=107.49 Aligned_cols=37 Identities=32% Similarity=0.543 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
..++|+||||||+||++|+.|+++|++|+|||+.+.+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 4579999999999999999999999999999998765
No 55
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.72 E-value=1.3e-06 Score=103.43 Aligned_cols=40 Identities=45% Similarity=0.648 Sum_probs=35.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRV 900 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~ 900 (1624)
..++|+|||||++||++|++|+++|++|+|||+. .+|+..
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~-~~~~ga 43 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKR-FIGSGS 43 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS-STTCSH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC-CCCCCc
Confidence 3579999999999999999999999999999998 565543
No 56
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.68 E-value=1e-07 Score=122.47 Aligned_cols=41 Identities=27% Similarity=0.309 Sum_probs=37.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRV 900 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~ 900 (1624)
..++|+|||||++||+||+.|+++|++|+|||+.+.+|+..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~ga 311 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGA 311 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCST
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccC
Confidence 45899999999999999999999999999999998888543
No 57
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.65 E-value=2.4e-07 Score=119.38 Aligned_cols=42 Identities=29% Similarity=0.264 Sum_probs=38.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
..++|+|||||++||+||++|+++|++|+|||+.+.+|+...
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS 304 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGAS 304 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccc
Confidence 458999999999999999999999999999999988886543
No 58
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.65 E-value=6.1e-07 Score=111.53 Aligned_cols=35 Identities=37% Similarity=0.516 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.++|+|||||++||+||+.|+++|++|+|||+.+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~ 41 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAF 41 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCC
Confidence 47999999999999999999999999999999764
No 59
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.63 E-value=4e-07 Score=107.75 Aligned_cols=37 Identities=30% Similarity=0.503 Sum_probs=34.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||++|+++|++|+++|++|+|||+....|
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 5799999999999999999999999999999987655
No 60
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.61 E-value=3.6e-06 Score=106.53 Aligned_cols=40 Identities=35% Similarity=0.686 Sum_probs=36.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC------CCcEEEEcccccCCCc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQ------GFSVTVLEARNRIGGR 899 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~------g~~v~vlE~~~~~GG~ 899 (1624)
..++|+|||||++||+||+.|++. |++|+|||+...+|+.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 357999999999999999999999 9999999999888865
No 61
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.60 E-value=2.1e-08 Score=123.25 Aligned_cols=114 Identities=24% Similarity=0.314 Sum_probs=85.7
Q ss_pred hhhhhhhhhccccCCCccccccccccccccCCCCccccccCCCcCChhcccccchhhhhhhhhcCCCCccccCCCCCCcE
Q 046008 785 QKESVVDDCQQRVDSDPKASNRLVGVDVSCDDPSCGMVDGGTVPLTIEERSESERVQSASCDDAGENHYLRCDIDVKKRI 864 (1624)
Q Consensus 785 ~~~~~~~~~~~~v~v~~~~~~~~~~~d~~~~~~~c~~v~~~r~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 864 (1624)
-++.-++.+.+.-..|.+ .+|+|+.|..|+ +.|.+-... -+|+.|..++++..++....+............++|
T Consensus 51 ~~~~A~~~~~~~n~~p~~-~grvCp~~~~Ce-~~C~~~~~~---~~~v~I~~le~~~~~~~~~~~~~~~~~~~~~~~~~V 125 (456)
T 2vdc_G 51 RLEEAYEVSQATNNFPEI-CGRICPQDRLCE-GNCVIEQST---HGAVTIGSVEKYINDTAWDQGWVKPRTPSRELGLSV 125 (456)
T ss_dssp CHHHHHHHHHHHCSCHHH-HHHHCCGGGSGG-GGCGGGGSS---SCSCCHHHHHHHHHHHHHHHTCCCCCCSCSSCCCCE
T ss_pred CHHHHHHHHHhhCCCCcc-ccccCCCCcchH-HhcccCCCC---CCCccHHHHHHHHHHHHHHcCCCCCCCCcCCCCCEE
Confidence 344445566666666664 579999988998 788644321 267789999999988766655322222233567899
Q ss_pred EEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccccc
Q 046008 865 IVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 865 ~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~ 903 (1624)
+|||||++||+||++|++.|++|+|||+.+++||.+...
T Consensus 126 ~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g 164 (456)
T 2vdc_G 126 GVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG 164 (456)
T ss_dssp EEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT
T ss_pred EEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec
Confidence 999999999999999999999999999999999987653
No 62
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.60 E-value=1.6e-07 Score=114.29 Aligned_cols=43 Identities=28% Similarity=0.506 Sum_probs=38.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
...++|+|||||++||+||+.|+++|++|+|||+.+.+||.+.
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~ 67 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIR 67 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeE
Confidence 3468999999999999999999999999999999999988764
No 63
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.58 E-value=4.5e-06 Score=103.62 Aligned_cols=39 Identities=41% Similarity=0.568 Sum_probs=35.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
...++|+||||||+||++|+.|+++|++|+|||+.+.++
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 48 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRT 48 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 467899999999999999999999999999999987654
No 64
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.57 E-value=3.7e-06 Score=104.46 Aligned_cols=40 Identities=38% Similarity=0.508 Sum_probs=35.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 858 IDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 858 ~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
....++|+||||||+||++|+.|+++|++|+|||+.+.++
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~ 47 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERT 47 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-C
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 4567899999999999999999999999999999987764
No 65
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.56 E-value=3.7e-06 Score=105.54 Aligned_cols=38 Identities=21% Similarity=0.432 Sum_probs=34.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG 898 (1624)
..+|+||||||+||++|+.|+++|++|+|||+.+.+++
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~ 63 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT 63 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 46899999999999999999999999999999887653
No 66
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.54 E-value=5.2e-07 Score=114.38 Aligned_cols=37 Identities=32% Similarity=0.555 Sum_probs=33.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||++||+||+.|+++|++|+|+|+.+..+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~ 59 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR 59 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC
Confidence 4799999999999999999999999999999976443
No 67
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.53 E-value=3.3e-07 Score=115.51 Aligned_cols=41 Identities=24% Similarity=0.365 Sum_probs=37.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRV 900 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~ 900 (1624)
..+||+|||||++|+++|+.|+++|++|+|+|+++..||..
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTS 57 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcc
Confidence 45899999999999999999999999999999997766654
No 68
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.52 E-value=1e-06 Score=107.57 Aligned_cols=36 Identities=31% Similarity=0.575 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+||||||+||+||+.|+++|++|+|||+...+
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 479999999999999999999999999999998764
No 69
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.45 E-value=5.3e-07 Score=107.25 Aligned_cols=40 Identities=33% Similarity=0.512 Sum_probs=35.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHH-CC-CcEEEEcccccCCCc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQR-QG-FSVTVLEARNRIGGR 899 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~-~g-~~v~vlE~~~~~GG~ 899 (1624)
...++|+|||||++||++|++|++ +| ++|+|||+.. +||.
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~-~~~g 60 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW-LAGG 60 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS-TTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC-CCCC
Confidence 346799999999999999999999 99 9999999988 5543
No 70
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.36 E-value=5.1e-07 Score=106.27 Aligned_cols=39 Identities=28% Similarity=0.410 Sum_probs=35.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
..+|+|||||++||++|++|+++|++|+|||+....+|.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~ 40 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQH 40 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 468999999999999999999999999999998877654
No 71
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.34 E-value=2.4e-06 Score=102.22 Aligned_cols=37 Identities=38% Similarity=0.498 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
..++|+|||||++||++|+.|+++|++|+|||+.+..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 3579999999999999999999999999999997653
No 72
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.32 E-value=2.6e-07 Score=124.14 Aligned_cols=116 Identities=15% Similarity=0.195 Sum_probs=85.7
Q ss_pred hhhhhhhhhhccccCCCccccccccccccccCCCCccccccCCCcCChhcccccchhhhhhhhhcCCCCcccc-------
Q 046008 784 RQKESVVDDCQQRVDSDPKASNRLVGVDVSCDDPSCGMVDGGTVPLTIEERSESERVQSASCDDAGENHYLRC------- 856 (1624)
Q Consensus 784 ~~~~~~~~~~~~~v~v~~~~~~~~~~~d~~~~~~~c~~v~~~r~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~------- 856 (1624)
+-++.-++.+.+.-..|.++ +|+++.+.+|+ +.|.+-... .+|+.|+.++||..++....+......+
T Consensus 107 g~~~~A~~~~~~~n~~p~~~-grvCp~~~~Ce-~~C~~~~~~---~~pv~I~~le~~~~d~~~~~~~~~~~~p~~~~~~~ 181 (1025)
T 1gte_A 107 KNYYGAAKMIFSDNPLGLTC-GMVCPTSDLCV-GGCNLYATE---EGSINIGGLQQFASEVFKAMNIPQIRNPCLPSQEK 181 (1025)
T ss_dssp TCHHHHHHHHHHHCTTHHHH-HHHCCGGGSGG-GGCGGGGST---TCCCCHHHHHHHHHHHHHHHTCCCCCCTTSCCGGG
T ss_pred CCHHHHHHHHHhcCChhHhh-cCCCCChhhHH-hhCccCCCC---CCCccHhHHHHHHHHHHHHhCCccccCcccccccc
Confidence 33445566777777778665 79999888887 677543221 2678999999999997555432111111
Q ss_pred -CCCCCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccccCCCcccccc
Q 046008 857 -DIDVKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARNRIGGRVYTDR 904 (1624)
Q Consensus 857 -~~~~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~~~GG~~~s~~ 904 (1624)
+....++|+|||||+|||+||++|++.|+ +|+|||+.+.+||.+....
T Consensus 182 ~~~~~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~i 231 (1025)
T 1gte_A 182 MPEAYSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEI 231 (1025)
T ss_dssp SCGGGGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTS
T ss_pred CCccCCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccC
Confidence 12346899999999999999999999999 7999999999999875543
No 73
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.31 E-value=2.3e-06 Score=103.50 Aligned_cols=41 Identities=41% Similarity=0.642 Sum_probs=37.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++||+||+.|+++|++|+|||+.+.+|+.+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~ 44 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL 44 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcE
Confidence 37899999999999999999999999999999999887654
No 74
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.28 E-value=1.8e-06 Score=108.44 Aligned_cols=43 Identities=35% Similarity=0.569 Sum_probs=38.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
...++|+|||||++||+||+.|++.|++|+|||+.+.+|++..
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~ 147 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTK 147 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCccccccc
Confidence 3458999999999999999999999999999999998887654
No 75
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.28 E-value=2.8e-06 Score=103.80 Aligned_cols=42 Identities=36% Similarity=0.650 Sum_probs=37.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRV 900 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~ 900 (1624)
...++|+|||||++||+||+.|+++|++|+|||+.+.+|+.+
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~ 65 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKL 65 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCcee
Confidence 456899999999999999999999999999999999888654
No 76
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.27 E-value=5.9e-06 Score=98.93 Aligned_cols=40 Identities=43% Similarity=0.691 Sum_probs=36.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
..++|+|||||++||++|+.|++.|++|+|||+.+.++++
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 4579999999999999999999999999999998876543
No 77
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.25 E-value=3.7e-06 Score=105.73 Aligned_cols=45 Identities=38% Similarity=0.644 Sum_probs=40.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDR 904 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~ 904 (1624)
..++|+|||||++||+||+.|++.|++|+|||+++.+||.++...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ 64 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNR 64 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC
Confidence 457999999999999999999999999999999999999776544
No 78
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.25 E-value=3e-06 Score=106.16 Aligned_cols=43 Identities=37% Similarity=0.545 Sum_probs=39.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
..++|+|||||++||+||+.|++.|++|+|||+++.+||..+.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~ 57 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYW 57 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 3579999999999999999999999999999999999997653
No 79
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.22 E-value=2.1e-05 Score=99.15 Aligned_cols=42 Identities=31% Similarity=0.493 Sum_probs=38.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
..++|+|||||++||+||+.|+++|++|+|||+.+.+||...
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~ 166 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAK 166 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchh
Confidence 357999999999999999999999999999999999988754
No 80
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.21 E-value=2.9e-06 Score=106.61 Aligned_cols=44 Identities=32% Similarity=0.489 Sum_probs=39.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~ 903 (1624)
..++|+|||||++||+||+.|++.|++|+|||+++.+||..+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~ 51 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWN 51 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccC
Confidence 45799999999999999999999999999999999999976543
No 81
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.19 E-value=6.8e-07 Score=104.41 Aligned_cols=45 Identities=27% Similarity=0.493 Sum_probs=40.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHH--CCCcEEEEcccccCCCccccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQR--QGFSVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~--~g~~v~vlE~~~~~GG~~~s~ 903 (1624)
...+||+|||||||||+||++|++ .|++|+|||+.+.+||.++..
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~ 109 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG 109 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeC
Confidence 346899999999999999999985 599999999999999988653
No 82
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.16 E-value=2.6e-05 Score=98.18 Aligned_cols=42 Identities=26% Similarity=0.498 Sum_probs=38.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
...+|+|||||++||+||+.|+++|++|+|||+.+.+||...
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~ 161 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSM 161 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCccc
Confidence 456999999999999999999999999999999999987643
No 83
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.16 E-value=5.3e-06 Score=104.08 Aligned_cols=44 Identities=30% Similarity=0.501 Sum_probs=40.0
Q ss_pred CCcEEEECCCHHHHHHHHHHH-HCCCcEEEEcccccCCCcccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQ-RQGFSVTVLEARNRIGGRVYTDR 904 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~-~~g~~v~vlE~~~~~GG~~~s~~ 904 (1624)
.++|+|||||++||+||+.|+ +.|++|+|||+++.+||..+...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ 52 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNR 52 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccC
Confidence 479999999999999999999 99999999999999999765543
No 84
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.15 E-value=3.9e-06 Score=100.17 Aligned_cols=36 Identities=33% Similarity=0.452 Sum_probs=33.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||++||++|+.|+++|++|+|||++..+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 478999999999999999999999999999997654
No 85
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.12 E-value=6.5e-06 Score=108.30 Aligned_cols=37 Identities=35% Similarity=0.551 Sum_probs=33.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccccC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARNRI 896 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~~~ 896 (1624)
...+|+|||||++||++|++|+++|+ +|+|||+....
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~ 40 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLN 40 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence 35799999999999999999999999 99999998764
No 86
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.08 E-value=2e-05 Score=95.70 Aligned_cols=38 Identities=37% Similarity=0.427 Sum_probs=34.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQG-FSVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g-~~v~vlE~~~~~GG 898 (1624)
.++|+|||||++||++|++|+++| ++|+|||+...+|+
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~ 61 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGS 61 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCC
Confidence 579999999999999999999999 99999999666654
No 87
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.99 E-value=5.2e-05 Score=91.18 Aligned_cols=38 Identities=18% Similarity=0.471 Sum_probs=34.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~~~GG 898 (1624)
+++|+|||||++||+||++|++.|+ +|+|||+++.++.
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y 40 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPY 40 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSB
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCC
Confidence 3689999999999999999999999 8999999986653
No 88
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.97 E-value=5.5e-05 Score=91.21 Aligned_cols=40 Identities=30% Similarity=0.514 Sum_probs=36.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCc--EEEEcccccCCCc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFS--VTVLEARNRIGGR 899 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~--v~vlE~~~~~GG~ 899 (1624)
..++|+|||||++||+||+.|++.|++ |+|+|+.+.++..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~ 49 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYE 49 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcC
Confidence 467999999999999999999999998 9999999877643
No 89
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.95 E-value=6.6e-06 Score=94.79 Aligned_cols=42 Identities=36% Similarity=0.570 Sum_probs=37.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
..+||+|||||||||+||++|++.|++|+|+|+ +.+||.+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~~ 46 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMAN 46 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeeec
Confidence 358999999999999999999999999999997 578888754
No 90
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.92 E-value=5.9e-06 Score=94.74 Aligned_cols=35 Identities=31% Similarity=0.418 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..+||+|||||||||+||++|+++|++|+|||+..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 35899999999999999999999999999999865
No 91
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.91 E-value=5.4e-06 Score=95.67 Aligned_cols=47 Identities=32% Similarity=0.463 Sum_probs=40.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcc----cccCCCcccccc
Q 046008 858 IDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEA----RNRIGGRVYTDR 904 (1624)
Q Consensus 858 ~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~----~~~~GG~~~s~~ 904 (1624)
....++|+|||||++||+||+.|+++|++|+|||+ ...+||.+....
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~ 69 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT 69 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch
Confidence 34678999999999999999999999999999999 458999887643
No 92
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.82 E-value=1e-05 Score=93.24 Aligned_cols=39 Identities=36% Similarity=0.472 Sum_probs=35.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRV 900 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~ 900 (1624)
.+||+|||||||||+||++|+++|++|+|||+. ..||.+
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~ 44 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRV 44 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGG
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCee
Confidence 589999999999999999999999999999985 566654
No 93
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.82 E-value=1.2e-05 Score=91.90 Aligned_cols=43 Identities=33% Similarity=0.556 Sum_probs=39.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEE-EcccccCCCccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTV-LEARNRIGGRVYTD 903 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~v-lE~~~~~GG~~~s~ 903 (1624)
.+++|+|||||++||+||++|+++|++|+| +|+ +.+||.+...
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~ 46 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSS 46 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeee
Confidence 468999999999999999999999999999 999 8889987654
No 94
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.78 E-value=1.4e-05 Score=91.46 Aligned_cols=41 Identities=29% Similarity=0.391 Sum_probs=38.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
..++|+|||||++||+||++|+++|++|+|+|+. +||.+..
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 3579999999999999999999999999999998 9998876
No 95
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.76 E-value=1.2e-05 Score=92.52 Aligned_cols=42 Identities=31% Similarity=0.458 Sum_probs=39.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
.++|+|||||++||+||+.|++.|++|+|||+.+.+||.+..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~ 48 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA 48 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh
Confidence 479999999999999999999999999999999999998754
No 96
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.73 E-value=2.2e-05 Score=97.98 Aligned_cols=73 Identities=14% Similarity=0.095 Sum_probs=52.9
Q ss_pred ChhcccccchhhhhhhhhcCCCCc---cccCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 830 TIEERSESERVQSASCDDAGENHY---LRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 830 ~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
+|..+....++.-..|...+.... ........++|+|||||++|++||++|++.|++|+|+|+.+.+||.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 84 (523)
T 1mo9_A 9 DHLTINQWATRIDEILEAPDGGEVIYNVDENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPH 84 (523)
T ss_dssp CCCCHHHHHHHHHHHHHCTTCCCEEEECCTTCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHH
T ss_pred chhhccchhhhhHHHhhccccchhhhccCCCCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccc
Confidence 455566665555555555331111 1123345689999999999999999999999999999999889998653
No 97
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.70 E-value=1.5e-05 Score=92.32 Aligned_cols=42 Identities=26% Similarity=0.543 Sum_probs=38.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
.++|+|||||++||+||++|+++|++|+|||+++.+||.+..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 46 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA 46 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec
Confidence 579999999999999999999999999999999999987643
No 98
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.70 E-value=1.7e-05 Score=98.02 Aligned_cols=43 Identities=35% Similarity=0.624 Sum_probs=38.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
..+||+|||||++||+||++|++.|++|+|+|+++.+||.+..
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~ 66 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLN 66 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 3589999999999999999999999999999999999997654
No 99
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.70 E-value=2.4e-05 Score=95.39 Aligned_cols=43 Identities=37% Similarity=0.574 Sum_probs=39.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccccCCCcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~~~GG~~~s 902 (1624)
..++|+|||||++||+||++|++.|+ +|+|||+++.+||.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 45899999999999999999999999 99999999999987644
No 100
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.68 E-value=2e-05 Score=92.68 Aligned_cols=42 Identities=26% Similarity=0.551 Sum_probs=39.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
.++|+|||||++||+||++|+++|++|+|||+.+.+||.+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 55 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA 55 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc
Confidence 579999999999999999999999999999999999987753
No 101
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.67 E-value=2.2e-05 Score=90.74 Aligned_cols=43 Identities=37% Similarity=0.529 Sum_probs=39.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~ 903 (1624)
..++|+|||||++||+||+.|++.|++|+|||+. .+||.+...
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~ 49 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWS 49 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccc
Confidence 3579999999999999999999999999999998 789987653
No 102
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.61 E-value=2.6e-05 Score=96.18 Aligned_cols=41 Identities=37% Similarity=0.537 Sum_probs=37.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
.++|+|||||++||+||++|+++|++|+|+|+ +.+||.+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 47999999999999999999999999999999 789987653
No 103
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.61 E-value=3.4e-05 Score=88.95 Aligned_cols=42 Identities=36% Similarity=0.593 Sum_probs=38.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
..++|+|||||++||+||+.|+++|++|+|||+ ..+||.+..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 357899999999999999999999999999999 678888754
No 104
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.59 E-value=3.6e-05 Score=91.71 Aligned_cols=37 Identities=32% Similarity=0.606 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
..+|+|||||++||+||+.|+++|++|+|||+....+
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 4699999999999999999999999999999987654
No 105
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.59 E-value=3.4e-05 Score=93.76 Aligned_cols=37 Identities=41% Similarity=0.592 Sum_probs=31.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 858 IDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 858 ~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..+.++|+||||||+||++|+.|+++|++|+|||++.
T Consensus 19 ~~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 19 SHMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp ----CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CcCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3456899999999999999999999999999999976
No 106
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.58 E-value=2.9e-05 Score=95.25 Aligned_cols=41 Identities=32% Similarity=0.601 Sum_probs=38.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 47999999999999999999999999999999999998865
No 107
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.57 E-value=3.2e-05 Score=94.80 Aligned_cols=41 Identities=29% Similarity=0.597 Sum_probs=38.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++|++||++|++.|++|+|+|+.+.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 47899999999999999999999999999999999999865
No 108
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.57 E-value=3.8e-05 Score=88.12 Aligned_cols=40 Identities=33% Similarity=0.626 Sum_probs=37.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCcEEEEcccccCCCcc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ-GFSVTVLEARNRIGGRV 900 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~-g~~v~vlE~~~~~GG~~ 900 (1624)
.++|+|||||++||+||+.|++. |.+|+|+|+.+.+||.+
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 57999999999999999999997 99999999999998753
No 109
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.56 E-value=4.5e-05 Score=93.73 Aligned_cols=43 Identities=30% Similarity=0.578 Sum_probs=39.5
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCc---EEEEcccccCCCcccccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQR---QGFS---VTVLEARNRIGGRVYTDR 904 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~---~g~~---v~vlE~~~~~GG~~~s~~ 904 (1624)
++|+|||||++||+||.+|++ .|++ |+|||+++.+||.+....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~ 51 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTW 51 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCC
Confidence 689999999999999999999 9999 999999999999876543
No 110
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.56 E-value=3.1e-05 Score=94.89 Aligned_cols=40 Identities=30% Similarity=0.489 Sum_probs=37.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++||+||++|+++|++|+|+|+ +.+||.+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 44 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCV 44 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccc
Confidence 57999999999999999999999999999999 88999764
No 111
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.56 E-value=5.1e-05 Score=86.97 Aligned_cols=41 Identities=32% Similarity=0.535 Sum_probs=37.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccccCCCccccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~~~GG~~~s~ 903 (1624)
++|+|||||++||+||+.|++.|+ +|+|||+ ..+||.+...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~-~~~gg~~~~~ 43 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEK-GMPGGQITGS 43 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECS-SSTTCGGGGC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcC-CCCCcccccc
Confidence 689999999999999999999999 9999999 5788887643
No 112
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.54 E-value=4.5e-05 Score=86.25 Aligned_cols=36 Identities=36% Similarity=0.494 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
+++|+|||||++||+||++|++.|++|+|||+....
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~ 37 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERR 37 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcc
Confidence 478999999999999999999999999999986543
No 113
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.54 E-value=5.1e-05 Score=93.18 Aligned_cols=41 Identities=34% Similarity=0.529 Sum_probs=37.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRV 900 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~ 900 (1624)
..+||+|||||++||+||++|++.|++|+|+|+...+||+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 36899999999999999999999999999999999887764
No 114
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.54 E-value=2.8e-05 Score=96.57 Aligned_cols=41 Identities=34% Similarity=0.524 Sum_probs=37.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCC
Q 046008 858 IDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGG 898 (1624)
Q Consensus 858 ~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG 898 (1624)
....++|+|||||++||++|..|++.|++|+|+|+.+.+|+
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred ccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 34578999999999999999999999999999999988764
No 115
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.53 E-value=5e-05 Score=93.00 Aligned_cols=42 Identities=33% Similarity=0.671 Sum_probs=39.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
..++|+|||||++|++||++|++.|++|+|+|+.+.+||.+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 468999999999999999999999999999999989998764
No 116
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.53 E-value=6.1e-05 Score=88.67 Aligned_cols=38 Identities=37% Similarity=0.618 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
...+|+|||||++|+++|++|+++|++|+|||+....+
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~ 42 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPED 42 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCC
Confidence 45799999999999999999999999999999976433
No 117
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.53 E-value=4.9e-05 Score=87.99 Aligned_cols=42 Identities=31% Similarity=0.470 Sum_probs=37.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcc----cccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEA----RNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~----~~~~GG~~~s 902 (1624)
.++|+|||||++||+||++|++.|++|+|||+ ...+||.+..
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 47899999999999999999999999999998 6778887654
No 118
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.52 E-value=5.8e-05 Score=89.62 Aligned_cols=38 Identities=37% Similarity=0.542 Sum_probs=35.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG 898 (1624)
.++|+|||||++||++|+.|+++|++|+|||+.+.+++
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 57999999999999999999999999999999887754
No 119
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.50 E-value=5.8e-05 Score=93.80 Aligned_cols=42 Identities=33% Similarity=0.463 Sum_probs=38.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
...||+|||||++||+||+.|+++|++|+|||+.+.+||...
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~ 81 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATA 81 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcch
Confidence 357999999999999999999999999999999999998753
No 120
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.50 E-value=5.6e-05 Score=89.60 Aligned_cols=41 Identities=34% Similarity=0.608 Sum_probs=37.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++||+||++|+++ |++|+|||+...+||.+.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc
Confidence 57999999999999999999997 999999999999987554
No 121
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.48 E-value=5.6e-05 Score=88.03 Aligned_cols=43 Identities=40% Similarity=0.594 Sum_probs=38.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
...++|+|||||++||+||++|++.|++|+|||+. .+||.+..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 45689999999999999999999999999999964 78887654
No 122
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.48 E-value=4.3e-05 Score=93.88 Aligned_cols=42 Identities=31% Similarity=0.634 Sum_probs=38.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
..++|+|||||++|++||+.|++.|++|+|+|+.+.+||.+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 357999999999999999999999999999999999999764
No 123
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.47 E-value=5.2e-05 Score=92.63 Aligned_cols=41 Identities=37% Similarity=0.631 Sum_probs=38.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
++|+|||||++|++||++|++.|++|+|+|+.+.+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 42 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLR 42 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccce
Confidence 68999999999999999999999999999999899998653
No 124
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.47 E-value=5.7e-05 Score=88.56 Aligned_cols=41 Identities=32% Similarity=0.554 Sum_probs=37.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~~~GG~~~s 902 (1624)
.++|+|||||++||+||+.|++.|+ +|+|||+.+ +||.+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~ 45 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKH 45 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcccc
Confidence 4789999999999999999999999 999999988 9986543
No 125
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.46 E-value=7.5e-05 Score=89.70 Aligned_cols=37 Identities=38% Similarity=0.600 Sum_probs=34.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCc-EEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFS-VTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~-v~vlE~~~~~G 897 (1624)
.++|+||||||+||++|+.|+++|++ |+|||+.+.++
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 47999999999999999999999999 99999987764
No 126
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.45 E-value=6e-05 Score=86.59 Aligned_cols=42 Identities=29% Similarity=0.564 Sum_probs=37.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~ 903 (1624)
.++|+|||||++||+||++|++.|++|+|||+ ..+||.+...
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~ 46 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQLTTT 46 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGGGGC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceEecc
Confidence 47899999999999999999999999999996 5789877543
No 127
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.45 E-value=6.5e-05 Score=89.43 Aligned_cols=35 Identities=37% Similarity=0.687 Sum_probs=32.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccC
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRI 896 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~ 896 (1624)
++|+||||||+||++|+.|+++ |++|+|||+.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4799999999999999999999 9999999998776
No 128
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.45 E-value=6.6e-05 Score=88.44 Aligned_cols=42 Identities=29% Similarity=0.581 Sum_probs=38.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCCCccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~GG~~~ 901 (1624)
...+|+|||||++||+||+.|+++ |++|+|||+.+.+||.+.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~ 107 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccc
Confidence 457999999999999999999999 999999999999987543
No 129
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.43 E-value=5.8e-05 Score=92.68 Aligned_cols=41 Identities=34% Similarity=0.725 Sum_probs=37.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++|++||++|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 47899999999999999999999999999999888988653
No 130
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.43 E-value=8.4e-05 Score=92.65 Aligned_cols=36 Identities=33% Similarity=0.519 Sum_probs=33.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...+||+|||||++||+||++|++.|++|+|+|+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 346899999999999999999999999999999865
No 131
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.42 E-value=5.6e-05 Score=88.61 Aligned_cols=37 Identities=30% Similarity=0.411 Sum_probs=33.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC------CcEEEEcccccCCC
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQG------FSVTVLEARNRIGG 898 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g------~~v~vlE~~~~~GG 898 (1624)
++|+|||||++||++|++|+++| ++|+|||+....+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 48999999999999999999998 99999999775443
No 132
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.40 E-value=8.5e-05 Score=91.04 Aligned_cols=41 Identities=37% Similarity=0.508 Sum_probs=37.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
..++|+|||||++|++||++|++.|++|+|+|+. .+||.+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 3589999999999999999999999999999987 7898765
No 133
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.40 E-value=7.6e-05 Score=88.77 Aligned_cols=36 Identities=33% Similarity=0.627 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+||||||+||++|+.|++.|++|+|||+.+..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 37 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPD 37 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 368999999999999999999999999999997754
No 134
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.40 E-value=7.8e-05 Score=92.02 Aligned_cols=41 Identities=29% Similarity=0.507 Sum_probs=36.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcc--------cccCCCcc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEA--------RNRIGGRV 900 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~--------~~~~GG~~ 900 (1624)
..+||+|||||++||+||++|++.|++|+|+|+ ...+||.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc 53 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTC 53 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCee
Confidence 458999999999999999999999999999998 45566654
No 135
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.38 E-value=7.8e-05 Score=91.61 Aligned_cols=42 Identities=31% Similarity=0.576 Sum_probs=37.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
..++|+|||||++||+||++|++.|++|+|+|+. .+||.+..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~ 60 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVN 60 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccc
Confidence 3589999999999999999999999999999965 88887643
No 136
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.37 E-value=8.5e-05 Score=91.88 Aligned_cols=42 Identities=29% Similarity=0.474 Sum_probs=37.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-CCCcEEEEc--------ccccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQR-QGFSVTVLE--------ARNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~-~g~~v~vlE--------~~~~~GG~~~s 902 (1624)
.++|+|||||++|++||++|++ .|++|+|+| +.+.+||.+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~ 53 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVN 53 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccC
Confidence 5799999999999999999999 999999999 46788987643
No 137
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.35 E-value=0.00013 Score=81.02 Aligned_cols=35 Identities=26% Similarity=0.438 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.++|+|||||++||+||+.|++.|.+|+|+|+...
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~ 37 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLD 37 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 47999999999999999999999999999999743
No 138
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.35 E-value=8.6e-05 Score=91.51 Aligned_cols=41 Identities=29% Similarity=0.613 Sum_probs=38.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++|++||+.|++.|++|+|+|+++.+||.+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 47899999999999999999999999999999999998654
No 139
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.35 E-value=8.6e-05 Score=91.90 Aligned_cols=40 Identities=25% Similarity=0.405 Sum_probs=36.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++||+||++|++.|++|+|+|+. .+||.|.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~ 47 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCA 47 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCccc
Confidence 479999999999999999999999999999986 5888763
No 140
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.34 E-value=8e-05 Score=91.74 Aligned_cols=41 Identities=29% Similarity=0.526 Sum_probs=37.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
..++|+|||||++|++||++|++.|++|+|+|+. .+||.+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 50 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCV 50 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCc
Confidence 3589999999999999999999999999999997 7888764
No 141
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.34 E-value=0.00012 Score=83.90 Aligned_cols=38 Identities=32% Similarity=0.682 Sum_probs=34.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
++|+|||||++||+||+.|++.|++|+|+|+ ++||.+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 6899999999999999999999999999985 5787764
No 142
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.34 E-value=9.5e-05 Score=90.76 Aligned_cols=40 Identities=30% Similarity=0.549 Sum_probs=37.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++|++||++|++.|++|+|+|+. .+||.+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCV 43 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCc
Confidence 589999999999999999999999999999997 7888764
No 143
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.33 E-value=8.7e-05 Score=90.92 Aligned_cols=41 Identities=27% Similarity=0.613 Sum_probs=38.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
.++|+|||||++|++||++|++.|++|+|+|+ +.+||.+..
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~ 45 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLN 45 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCC
Confidence 57999999999999999999999999999999 889998753
No 144
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.32 E-value=8.3e-05 Score=90.88 Aligned_cols=40 Identities=25% Similarity=0.498 Sum_probs=37.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++|++||++|++.|++|+|+|+. .+||.+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCV 43 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCccc
Confidence 579999999999999999999999999999997 7888765
No 145
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.31 E-value=7.5e-05 Score=92.42 Aligned_cols=40 Identities=38% Similarity=0.612 Sum_probs=37.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ---GFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~---g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++|++||++|++. |++|+|+|+.+ +||.+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~ 44 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAV 44 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCccc
Confidence 47899999999999999999999 99999999988 999764
No 146
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.31 E-value=0.00013 Score=89.89 Aligned_cols=34 Identities=35% Similarity=0.527 Sum_probs=31.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEA 892 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~ 892 (1624)
...++|+|||||++||+||++|++.|++|+|+|+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk 40 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDF 40 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEe
Confidence 3568999999999999999999999999999995
No 147
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.29 E-value=0.00015 Score=89.78 Aligned_cols=38 Identities=37% Similarity=0.497 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG 898 (1624)
.++|+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 47999999999999999999999999999999764333
No 148
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.29 E-value=0.00012 Score=90.73 Aligned_cols=41 Identities=37% Similarity=0.635 Sum_probs=37.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
.++|+|||||++||+||++|++.|++|+|+|+. .+||.+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~ 42 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVN 42 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccc
Confidence 479999999999999999999999999999997 58887643
No 149
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.28 E-value=0.0001 Score=89.93 Aligned_cols=40 Identities=35% Similarity=0.614 Sum_probs=36.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++|++||..|++.|++|+|+|+. .+||.+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 478999999999999999999999999999997 7888754
No 150
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.28 E-value=0.00021 Score=90.27 Aligned_cols=43 Identities=33% Similarity=0.472 Sum_probs=39.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
..++|+|||||++||+||+.|+++|++|+|||+.+.+||....
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~ 167 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKL 167 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhh
Confidence 3569999999999999999999999999999999999987543
No 151
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.26 E-value=0.00012 Score=89.57 Aligned_cols=40 Identities=33% Similarity=0.608 Sum_probs=35.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++|++||+.|++.|++|+|+|+. .+||.+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~ 42 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCL 42 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccc
Confidence 368999999999999999999999999999997 6776653
No 152
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.25 E-value=0.00014 Score=87.37 Aligned_cols=38 Identities=32% Similarity=0.360 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~GG 898 (1624)
.++|+|||||++||++|+.|+++ |++|+|||+....+|
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~ 75 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNE 75 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCc
Confidence 47999999999999999999999 999999999754443
No 153
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.24 E-value=0.00012 Score=90.84 Aligned_cols=42 Identities=31% Similarity=0.483 Sum_probs=37.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-CCCcEEEEc--------ccccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQR-QGFSVTVLE--------ARNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~-~g~~v~vlE--------~~~~~GG~~~s 902 (1624)
.++|+|||||++|++||++|++ .|++|+|+| +.+.+||.+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~ 57 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVN 57 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHH
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeec
Confidence 5799999999999999999999 999999999 46788887643
No 154
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.24 E-value=0.00019 Score=90.57 Aligned_cols=38 Identities=21% Similarity=0.413 Sum_probs=35.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG 898 (1624)
.++|+|||||++|+++|+.|+++|++|+|||+.+..+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 58999999999999999999999999999999875555
No 155
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.21 E-value=0.00013 Score=89.51 Aligned_cols=42 Identities=29% Similarity=0.393 Sum_probs=39.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-C------CCcEEEEcccccCCCcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQR-Q------GFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~-~------g~~v~vlE~~~~~GG~~~s 902 (1624)
.++|+|||||++||+||.+|++ . |++|+|||+.+.+||.++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~ 51 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRS 51 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcccc
Confidence 4789999999999999999999 7 9999999999999998864
No 156
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.21 E-value=0.00017 Score=88.70 Aligned_cols=44 Identities=32% Similarity=0.419 Sum_probs=39.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CcEEEEcccccCCCccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQG--FSVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g--~~v~vlE~~~~~GG~~~s~ 903 (1624)
..++|+|||||++|++||.+|++.| ++|+|||+.+.+||+++..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g 50 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFG 50 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecc
Confidence 4579999999999999999999999 9999999999999987553
No 157
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.18 E-value=0.00016 Score=88.65 Aligned_cols=40 Identities=38% Similarity=0.621 Sum_probs=36.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||++|++||..|++.|++|+|+|+.+ +||.+.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~ 45 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCL 45 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCC
Confidence 4789999999999999999999999999999987 888764
No 158
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.18 E-value=0.00025 Score=75.12 Aligned_cols=33 Identities=45% Similarity=0.766 Sum_probs=31.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|+|||||++|+.+|..|++.|.+|+|+|+.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 689999999999999999999999999999876
No 159
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.18 E-value=0.0002 Score=95.68 Aligned_cols=41 Identities=44% Similarity=0.793 Sum_probs=39.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
.++|+|||||+|||+||.+|++.|++|+|||+.+++||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 57899999999999999999999999999999999999988
No 160
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.16 E-value=0.00029 Score=84.57 Aligned_cols=41 Identities=37% Similarity=0.437 Sum_probs=37.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYT 902 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s 902 (1624)
++|+|||||++|+.||++|+++|++|+|+|++...+...+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~ 42 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHG 42 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcccc
Confidence 68999999999999999999999999999999887766554
No 161
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.14 E-value=0.00022 Score=87.07 Aligned_cols=36 Identities=25% Similarity=0.538 Sum_probs=34.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCC
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIG 897 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~G 897 (1624)
++|+|||||++||+||++|++. |++|+|||+++.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 6999999999999999999998 89999999999887
No 162
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.13 E-value=0.00023 Score=86.18 Aligned_cols=40 Identities=28% Similarity=0.518 Sum_probs=36.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCcEEEEcccccCCCcc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQR--QGFSVTVLEARNRIGGRV 900 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~--~g~~v~vlE~~~~~GG~~ 900 (1624)
+++|+|||||++||+||++|++ .|++|+|+|+++..|+..
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 4689999999999999999999 899999999999887643
No 163
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.13 E-value=0.00017 Score=89.40 Aligned_cols=42 Identities=36% Similarity=0.691 Sum_probs=38.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTD 903 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~ 903 (1624)
.++|+|||||++||+||++|++. ++|+|||+.+++||.+...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~ 149 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLK 149 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGT
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeecc
Confidence 46899999999999999999999 9999999999999987653
No 164
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.12 E-value=0.00028 Score=88.04 Aligned_cols=41 Identities=32% Similarity=0.609 Sum_probs=36.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVY 901 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~ 901 (1624)
...++|+|||||++||+||++|+++|++|+|+|+ ++||.+.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 4568999999999999999999999999999985 5788754
No 165
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.12 E-value=0.00018 Score=87.55 Aligned_cols=39 Identities=26% Similarity=0.392 Sum_probs=36.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-----CcEEEEcccccCCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQG-----FSVTVLEARNRIGG 898 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g-----~~v~vlE~~~~~GG 898 (1624)
..++|+|||||++||+||+.|++.| ++|+|||+.+.+|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 3469999999999999999999999 99999999999883
No 166
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.12 E-value=0.00026 Score=89.32 Aligned_cols=40 Identities=23% Similarity=0.311 Sum_probs=36.3
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCC
Q 046008 858 IDVKKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIG 897 (1624)
Q Consensus 858 ~~~~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~G 897 (1624)
...+++|+|||||++||+||++|++. |++|+|||+++.+|
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 44578999999999999999999998 89999999999876
No 167
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.09 E-value=0.00021 Score=85.79 Aligned_cols=38 Identities=29% Similarity=0.315 Sum_probs=35.0
Q ss_pred CcEEEECCCHHHHHHHHHHHH---CCCcEEEEcccccCCCc
Q 046008 862 KRIIVIGAGPAGLTAARHLQR---QGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~---~g~~v~vlE~~~~~GG~ 899 (1624)
++|+|||||++||+||++|++ .|++|+|+|+++.++++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~ 42 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR 42 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec
Confidence 689999999999999999999 99999999999976554
No 168
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.08 E-value=0.00026 Score=89.58 Aligned_cols=34 Identities=32% Similarity=0.550 Sum_probs=32.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEA 892 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~ 892 (1624)
...++|+|||||+|||+||.+|++.|++|+|+|+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 3468999999999999999999999999999997
No 169
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.08 E-value=0.00034 Score=87.37 Aligned_cols=34 Identities=38% Similarity=0.590 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---CCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQR---QGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~---~g~~v~vlE~~~ 894 (1624)
.++|+|||||++|+++|+.|++ .|++|+|||+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 5799999999999999999999 999999999954
No 170
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.07 E-value=0.00032 Score=85.51 Aligned_cols=39 Identities=33% Similarity=0.640 Sum_probs=34.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCCCc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIGGR 899 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~GG~ 899 (1624)
+++|+|||||++||+||++|++. |++|+|||+.+.+|+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~ 43 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHA 43 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC--
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccC
Confidence 47999999999999999999998 8899999999988754
No 171
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.06 E-value=0.00032 Score=89.52 Aligned_cols=40 Identities=30% Similarity=0.556 Sum_probs=37.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRV 900 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~ 900 (1624)
.++|+|||||++||+||++|+++|++|+|+|+.+..||..
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 5799999999999999999999999999999999999854
No 172
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.05 E-value=0.00028 Score=89.45 Aligned_cols=39 Identities=28% Similarity=0.399 Sum_probs=35.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
..+|+|||||++||+||+.|+++|.+|+|||+....||.
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~ 45 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSH 45 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence 469999999999999999999999999999998877654
No 173
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.05 E-value=0.00025 Score=86.97 Aligned_cols=37 Identities=35% Similarity=0.480 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~G 897 (1624)
+++|+|||||++||+||++|++. |++|+|||+++.+|
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 47899999999999999999999 99999999999875
No 174
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.02 E-value=0.0004 Score=85.63 Aligned_cols=36 Identities=44% Similarity=0.650 Sum_probs=33.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 863 RIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 863 ~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
||+|||||++||+||+.|++.|++|+|+|+. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 6999999999999999999999999999998 56664
No 175
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.02 E-value=0.00027 Score=87.42 Aligned_cols=34 Identities=29% Similarity=0.571 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---CCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQR---QGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~---~g~~v~vlE~~~ 894 (1624)
.++|+|||||++|+++|+.|++ .|++|+|+|+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 4689999999999999999999 999999999865
No 176
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.98 E-value=0.00037 Score=88.85 Aligned_cols=39 Identities=31% Similarity=0.406 Sum_probs=35.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
..+|+|||||+|||+||+.|+++|++|+|||+....||.
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~ 56 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSH 56 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 479999999999999999999999999999998776654
No 177
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.96 E-value=0.00038 Score=89.02 Aligned_cols=38 Identities=26% Similarity=0.504 Sum_probs=34.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-CCCcEEEEcccccCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQR-QGFSVTVLEARNRIG 897 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~-~g~~v~vlE~~~~~G 897 (1624)
...+|+||||||+||++|+.|++ .|++|+|||+++.++
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 35789999999999999999999 999999999987653
No 178
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.96 E-value=0.00037 Score=87.45 Aligned_cols=38 Identities=32% Similarity=0.461 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
..+|+|||||++||+||+.|++ |.+|+|||+....||.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 5799999999999999999999 9999999999877764
No 179
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.95 E-value=0.00044 Score=86.17 Aligned_cols=35 Identities=29% Similarity=0.509 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH------------CCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQR------------QGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~------------~g~~v~vlE~~~ 894 (1624)
..++|+|||||++|++||..|++ .|++|+|+|+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 35799999999999999999999 999999999864
No 180
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=96.95 E-value=0.00044 Score=86.58 Aligned_cols=36 Identities=25% Similarity=0.436 Sum_probs=34.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCC
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIG 897 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~G 897 (1624)
++|+|||||++||+||++|++. |++|+|||+++.+|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 6899999999999999999998 89999999998876
No 181
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.94 E-value=0.00045 Score=88.71 Aligned_cols=39 Identities=36% Similarity=0.369 Sum_probs=35.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
..+|+|||||++||+||+.|+++|.+|+|||+....||.
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~ 43 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSH 43 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCc
Confidence 468999999999999999999999999999998876554
No 182
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.92 E-value=0.00052 Score=87.38 Aligned_cols=39 Identities=28% Similarity=0.413 Sum_probs=34.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc-cCCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN-RIGG 898 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~-~~GG 898 (1624)
..++|+|||||+||++||+.|++.|.+|+|+|+.. .+|+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 45899999999999999999999999999999875 4554
No 183
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.92 E-value=0.00056 Score=86.89 Aligned_cols=38 Identities=32% Similarity=0.462 Sum_probs=34.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc-cCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN-RIG 897 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~-~~G 897 (1624)
..++|+|||||+||++||+.|++.|.+|+|+|+.. .+|
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG 64 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIG 64 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccC
Confidence 35899999999999999999999999999999974 555
No 184
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.92 E-value=0.00052 Score=86.12 Aligned_cols=34 Identities=32% Similarity=0.556 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---CCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQR---QGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~---~g~~v~vlE~~~ 894 (1624)
.++|+|||||++|++||+.|++ .|++|+|+|+.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 5789999999999999999999 999999999854
No 185
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.91 E-value=0.0006 Score=82.21 Aligned_cols=38 Identities=24% Similarity=0.544 Sum_probs=34.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCc--EEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFS--VTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~--v~vlE~~~~~GG 898 (1624)
+++|+|||||++||+||+.|++.|++ |+|+|+.+.++.
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y 41 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY 41 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc
Confidence 46899999999999999999999998 999999988764
No 186
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.87 E-value=0.00063 Score=86.72 Aligned_cols=38 Identities=32% Similarity=0.408 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc-cCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN-RIG 897 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~-~~G 897 (1624)
..++|+|||||+||++||+.|++.|.+|+|+|+.. .+|
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 45899999999999999999999999999999874 444
No 187
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.81 E-value=0.00068 Score=82.67 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=34.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCCC
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIGG 898 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~GG 898 (1624)
++|+|||||++|++||++|++. |++|+|+|+++.+|.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc
Confidence 5899999999999999999998 999999999987654
No 188
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.79 E-value=0.00068 Score=81.39 Aligned_cols=40 Identities=25% Similarity=0.491 Sum_probs=34.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 858 IDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 858 ~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
...+++|+|||||+||++||..|...|++|+|||+.+.++
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~ 45 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP 45 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC
Confidence 4567899999999999999999988899999999987754
No 189
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.78 E-value=0.00062 Score=86.56 Aligned_cols=39 Identities=21% Similarity=0.359 Sum_probs=35.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CcEEEEcccccCCCc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQG--FSVTVLEARNRIGGR 899 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g--~~v~vlE~~~~~GG~ 899 (1624)
..+|+|||||++||+||+.|++.| .+|+|||+....+|.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~ 45 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH 45 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh
Confidence 468999999999999999999999 999999998776654
No 190
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.76 E-value=0.00074 Score=82.25 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=34.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCCC
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIGG 898 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~GG 898 (1624)
++|+|||||++||+||..|++. |++|+|+|+.+.+|.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF 39 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCc
Confidence 4899999999999999999998 999999999988763
No 191
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.76 E-value=0.0006 Score=85.60 Aligned_cols=40 Identities=30% Similarity=0.554 Sum_probs=35.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc--------ccCCCcc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR--------NRIGGRV 900 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~--------~~~GG~~ 900 (1624)
.+||+|||||++|++||.++++.|.+|+|+|+. ..+||-|
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtC 89 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTC 89 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcc
Confidence 489999999999999999999999999999974 3467754
No 192
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.73 E-value=0.00075 Score=80.56 Aligned_cols=36 Identities=28% Similarity=0.578 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQG--FSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g--~~v~vlE~~~~~ 896 (1624)
.|||+|||||+||++||.+|++.| .+|+|+|+++..
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~ 39 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETY 39 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCC
Confidence 589999999999999999999877 479999998753
No 193
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.73 E-value=0.00082 Score=82.77 Aligned_cols=38 Identities=26% Similarity=0.379 Sum_probs=34.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~GG 898 (1624)
+++|+|||||++|++||++|++. |++|+|+|+.+.+|+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 75 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSY 75 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCC
Confidence 57999999999999999999996 899999999887754
No 194
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.73 E-value=0.00084 Score=86.31 Aligned_cols=35 Identities=37% Similarity=0.699 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-----CCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQR-----QGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~-----~g~~v~vlE~~~~ 895 (1624)
..+|+||||||+||++|+.|++ .|++|+|||+++.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 4789999999999999999999 9999999999754
No 195
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.66 E-value=0.0011 Score=80.00 Aligned_cols=38 Identities=26% Similarity=0.510 Sum_probs=34.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCc--EEEEcccccCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFS--VTVLEARNRIG 897 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~--v~vlE~~~~~G 897 (1624)
..++|+|||||++|++||++|++.|++ |+|+|+.+.++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 468999999999999999999999985 99999988765
No 196
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.65 E-value=0.0012 Score=81.37 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=35.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC---CcEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQG---FSVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g---~~v~vlE~~~~~GG 898 (1624)
.++|+|||||++|++||..|++.| ++|+|+|+.+.+|.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~ 75 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISF 75 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSB
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCc
Confidence 589999999999999999999998 99999999887764
No 197
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.64 E-value=0.0009 Score=81.57 Aligned_cols=37 Identities=24% Similarity=0.424 Sum_probs=32.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccccCCC
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARNRIGG 898 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~~~GG 898 (1624)
+||+|||||+||++||.+|++.|+ +|+|+|+.+.+++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~ 39 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF 39 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC
Confidence 579999999999999999999984 6999999876643
No 198
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.61 E-value=0.0014 Score=79.57 Aligned_cols=37 Identities=22% Similarity=0.505 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~~~G 897 (1624)
.++|+|||||++||+||..|++.|+ +|+|+|+.+.++
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 42 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP 42 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC
Confidence 5799999999999999999999998 799999987654
No 199
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.59 E-value=0.0011 Score=82.21 Aligned_cols=39 Identities=23% Similarity=0.440 Sum_probs=35.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccCC
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRIG 897 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~G 897 (1624)
...++|+|||||+||++||+.|+++ |++|+|+|+.+.+|
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 3468999999999999999999887 88999999998765
No 200
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.57 E-value=0.0012 Score=84.73 Aligned_cols=38 Identities=13% Similarity=0.167 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC------CCcEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ------GFSVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~------g~~v~vlE~~~~~GG 898 (1624)
..+|+|||||+|||+||+.|+++ |.+|+|||+....++
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s 65 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERS 65 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCC
Confidence 57999999999999999999998 999999999866443
No 201
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.56 E-value=0.0013 Score=84.12 Aligned_cols=36 Identities=33% Similarity=0.515 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHH---H-CCCcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQ---R-QGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~---~-~g~~v~vlE~~~~ 895 (1624)
...+|+|||||+|||+||+.|+ + +|.+|+|+|+...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 3579999999999999999999 6 8999999999875
No 202
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.55 E-value=0.0012 Score=80.25 Aligned_cols=36 Identities=28% Similarity=0.629 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHH---CCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQR---QGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~---~g~~v~vlE~~~~~ 896 (1624)
+++|+|||||++||+||++|++ .|++|+|+|+++..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 5799999999999999999999 89999999998864
No 203
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.51 E-value=0.0016 Score=81.42 Aligned_cols=37 Identities=35% Similarity=0.550 Sum_probs=33.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
...++|||||||++|+++|++|++.|++|+|||+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3568999999999999999999999999999999764
No 204
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.51 E-value=0.0014 Score=79.69 Aligned_cols=35 Identities=29% Similarity=0.541 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQG--FSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g--~~v~vlE~~~~ 895 (1624)
.++|+|||||+||++||++|++.+ ++|+|+|+++.
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 468999999999999999999876 78999999875
No 205
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.47 E-value=0.0014 Score=78.02 Aligned_cols=37 Identities=24% Similarity=0.486 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
...+|+|||||+||++||..|++.| +|+|+|+.+..+
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~ 43 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY 43 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc
Confidence 4679999999999999999999999 999999987653
No 206
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.43 E-value=0.0018 Score=77.15 Aligned_cols=49 Identities=20% Similarity=0.251 Sum_probs=38.6
Q ss_pred HHHHHHh-hhccccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccCh
Q 046008 1104 TVVEALG-KELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPL 1161 (1624)
Q Consensus 1104 sLveALA-e~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~ 1161 (1624)
.+.+.|. .+++|++++.|++|.. +++.+.|++.+|+++.||.||+++..
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~---------~~~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKK---------AGEGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEE---------ETTEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEe---------cCCEEEEEECCCCEEECCEEEECcCC
Confidence 3444443 3568999999999987 34568888999999999999999874
No 207
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.36 E-value=0.0015 Score=81.14 Aligned_cols=38 Identities=16% Similarity=0.482 Sum_probs=34.7
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 858 IDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 858 ~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
...+++|+|||||+||++||..|++.+++|+|+|++++
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 45578999999999999999999999999999999864
No 208
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.12 E-value=0.0025 Score=78.87 Aligned_cols=37 Identities=27% Similarity=0.400 Sum_probs=32.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHH-CCCcEEEEccccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQR-QGFSVTVLEARNR 895 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~-~g~~v~vlE~~~~ 895 (1624)
.+.+|+||||||.||+.+|.+|++ .|++|+|||+...
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 357999999999999999999997 6899999998543
No 209
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.91 E-value=0.0028 Score=79.36 Aligned_cols=37 Identities=24% Similarity=0.349 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
..+|+||||||.||+++|.+|++ |.+|+|||+....+
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 35899999999999999999999 99999999976654
No 210
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=95.83 E-value=0.0044 Score=78.40 Aligned_cols=36 Identities=28% Similarity=0.407 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQG-FSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g-~~v~vlE~~~~ 895 (1624)
..+|+||||||.||+++|.+|++.| ++|+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999998 79999999765
No 211
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.78 E-value=0.0054 Score=76.18 Aligned_cols=38 Identities=24% Similarity=0.243 Sum_probs=34.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
..++|+|||||++|+++|++|++.|++|+|+|+...++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 35799999999999999999999999999999987665
No 212
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.24 E-value=0.012 Score=73.26 Aligned_cols=38 Identities=26% Similarity=0.399 Sum_probs=34.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
...++++|||||++|+++|++|++.|++|+|+|+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 34689999999999999999999999999999997643
No 213
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.09 E-value=0.0051 Score=76.34 Aligned_cols=41 Identities=24% Similarity=0.187 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
..-+|||||||||+||++|+.|.++|...+++|+.+..|+.
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~ 77 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQP 77 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCC
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCc
Confidence 45579999999999999999999999888888888777764
No 214
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.07 E-value=0.01 Score=75.12 Aligned_cols=36 Identities=33% Similarity=0.478 Sum_probs=32.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHC-CCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQ-GFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~-g~~v~vlE~~~ 894 (1624)
...+|+||||||.||+++|.+|++. |++|+|||+..
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3468999999999999999999975 89999999976
No 215
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=94.94 E-value=0.0095 Score=75.17 Aligned_cols=37 Identities=38% Similarity=0.390 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHH-CCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQR-QGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~-~g~~v~vlE~~~~~G 897 (1624)
.+|+||||||.||+++|.+|++ .|++|+|||+....+
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~ 39 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDE 39 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCccc
Confidence 4799999999999999999998 799999999977653
No 216
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=94.76 E-value=0.015 Score=72.90 Aligned_cols=38 Identities=32% Similarity=0.399 Sum_probs=34.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCcEEEEcccccCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQ-GFSVTVLEARNRIG 897 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~-g~~v~vlE~~~~~G 897 (1624)
..++|+|||||++|+++|++|++. |.+|+|||+.....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~ 50 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDR 50 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCC
Confidence 458999999999999999999998 89999999976654
No 217
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=94.58 E-value=0.019 Score=72.73 Aligned_cols=37 Identities=30% Similarity=0.328 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHH-CCCcEEEEcccccC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQR-QGFSVTVLEARNRI 896 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~-~g~~v~vlE~~~~~ 896 (1624)
..++++|||||++|+++|++|++ .|++|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 45899999999999999999999 89999999997654
No 218
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.56 E-value=0.022 Score=65.23 Aligned_cols=36 Identities=28% Similarity=0.531 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 478999999999999999999999999999986553
No 219
>2xpp_A IWS1, ECU08_0440; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.74A {Encephalitozoon cuniculi} PDB: 2xpo_A 2xpn_A 2xpl_A
Probab=94.24 E-value=0.037 Score=57.76 Aligned_cols=81 Identities=21% Similarity=0.293 Sum_probs=63.8
Q ss_pred hhcccccccccccccchhhhhhccCCchh----HHHHHHHHhhhhhcchhhHHHhccccccccccc--cccCchhHHHHH
Q 046008 1438 ATLKSFAGTREGLTTLNSWILDSMGKDGT----QLLRHCVRLLVRVSTDLLAVRLSGIGKTVREKV--CVHTSRDIRAIA 1511 (1624)
Q Consensus 1438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 1511 (1624)
.++..+-+...-|..|..||.-- .||+ ++-+.++++|.-.+-+-..++.|||||+|-- . +-...+++|++|
T Consensus 51 ~~l~~~~ld~giL~~l~~WL~PL--pDgsLP~~~Ir~~lL~~L~~lPI~~e~Lk~SglGkvv~~-l~k~~~et~~nk~la 127 (145)
T 2xpp_A 51 KALQESLLDEGILDEIKGWLEPL--PDKSMPNIKIRKRLLDVLKTMKIHKEHLVTSGVGKIVYF-YSINPKESKEVRASA 127 (145)
T ss_dssp TTTHHHHHHTTHHHHHHHHHSCC--TTSCCCCHHHHHHHHHHHHTSCCCHHHHHHHCHHHHHHH-HHHCTTSCHHHHHHH
T ss_pred HHHHHHHHHcCHHHHHHHHhCcC--CCCCCCCHHHHHHHHHHHHHCCCCHHHhhcCCCCcchhh-hhcCCccCHHHHHHH
Confidence 34445555555578999999844 6776 7888999999999999999999999999932 2 344678899999
Q ss_pred HHHHHHHHHH
Q 046008 1512 SQLVSVWLEV 1521 (1624)
Q Consensus 1512 ~~~~~~~~~~ 1521 (1624)
++|++.|..-
T Consensus 128 ~~Li~~WsRp 137 (145)
T 2xpp_A 128 KALVQKWTNE 137 (145)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999753
No 220
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=94.19 E-value=0.038 Score=67.18 Aligned_cols=39 Identities=33% Similarity=0.524 Sum_probs=35.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGG 898 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG 898 (1624)
..++|+|||||++|+.+|..|++.|.+|+|+|+.+++..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 186 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG 186 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc
Confidence 358999999999999999999999999999999887654
No 221
>3nfq_A Transcription factor IWS1; SPN1, RNA polymerase II; 1.85A {Saccharomyces cerevisiae} PDB: 3o8z_A 3oak_A
Probab=94.02 E-value=0.025 Score=60.24 Aligned_cols=73 Identities=16% Similarity=0.315 Sum_probs=58.4
Q ss_pred ccccccccchhhhhhccCCchh----HHHHHHHHhhhhhcchhhHHHhccccccccc-cccccCchhHHHHHHHHHHHHH
Q 046008 1445 GTREGLTTLNSWILDSMGKDGT----QLLRHCVRLLVRVSTDLLAVRLSGIGKTVRE-KVCVHTSRDIRAIASQLVSVWL 1519 (1624)
Q Consensus 1445 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 1519 (1624)
+....|..|..||.-- .||+ ++-+.++++|.-.+-+-..++.|||||+|-- .-|-...++++++|.+|++.|.
T Consensus 73 ld~giL~~l~~WLePL--pDgSLP~~~Ir~~lL~~L~~lPI~~e~Lk~SglGkvV~~l~k~~~et~~nkrla~~Li~~Ws 150 (170)
T 3nfq_A 73 LDNNLLQSVRIWLEPL--PDGSLPSFEIQKSLFAALNDLPVKTEHLKESGLGRVVIFYTKSKRVEAQLARLAEKLIAEWT 150 (170)
T ss_dssp HHTTHHHHHHHHHSCC--TTSCCCCHHHHHHHHHHHHTSCCCHHHHHHHSHHHHHHHHHHCTTSCHHHHHHHHHHHHHHT
T ss_pred HHcchHHHHHHHhCcC--CCCCCCcHHHHHHHHHHHHHCCCCHHHHhhCCCCceeeehhcCCcccHHHHHHHHHHHHHHH
Confidence 3345678899999866 4665 6778888888888999999999999999821 1155677899999999999994
No 222
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=94.01 E-value=0.037 Score=66.35 Aligned_cols=39 Identities=21% Similarity=0.253 Sum_probs=35.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++..+
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 478999999999999999999999999999998876543
No 223
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.93 E-value=0.051 Score=56.35 Aligned_cols=39 Identities=26% Similarity=0.370 Sum_probs=33.6
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 857 DIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 857 ~~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
......+|+|||+|..|+.+|..|.+.|++|+++++...
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 345678999999999999999999999999999998653
No 224
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.72 E-value=0.045 Score=66.89 Aligned_cols=37 Identities=35% Similarity=0.572 Sum_probs=34.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||++|+.+|..|++.|.+|+|+|+.+++.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 207 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL 207 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc
Confidence 4789999999999999999999999999999987764
No 225
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=93.47 E-value=0.061 Score=65.84 Aligned_cols=37 Identities=38% Similarity=0.560 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+++.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 205 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc
Confidence 4789999999999999999999999999999977653
No 226
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=93.45 E-value=0.062 Score=65.80 Aligned_cols=37 Identities=41% Similarity=0.607 Sum_probs=34.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+++.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 219 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIG 219 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccc
Confidence 4799999999999999999999999999999987664
No 227
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=93.33 E-value=0.071 Score=63.34 Aligned_cols=39 Identities=26% Similarity=0.503 Sum_probs=35.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+++.++
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~ 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc
Confidence 578999999999999999999999999999998876543
No 228
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=93.25 E-value=0.056 Score=61.58 Aligned_cols=34 Identities=35% Similarity=0.588 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
..++|+|||||..|+-+|..|++.|.+|+|+|+.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~ 184 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRR 184 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeeccc
Confidence 3578999999999999999999999999999964
No 229
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.19 E-value=0.085 Score=53.87 Aligned_cols=38 Identities=18% Similarity=0.402 Sum_probs=34.0
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 858 IDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 858 ~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.....+|+|||+|..|...|..|.+.|++|+++|+...
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 34567899999999999999999999999999998654
No 230
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.19 E-value=0.07 Score=64.94 Aligned_cols=37 Identities=32% Similarity=0.469 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+++.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 206 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc
Confidence 4799999999999999999999999999999877653
No 231
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.15 E-value=0.064 Score=63.67 Aligned_cols=36 Identities=28% Similarity=0.442 Sum_probs=33.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
++|+|||||+.|+.+|..|++.|.+|+|+|+.+++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 179 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL 179 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec
Confidence 789999999999999999999999999999877653
No 232
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=93.14 E-value=0.068 Score=65.06 Aligned_cols=36 Identities=44% Similarity=0.615 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||++|+.+|..|++.|.+|+|+|+.+++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 478999999999999999999999999999987654
No 233
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.96 E-value=0.065 Score=65.38 Aligned_cols=36 Identities=25% Similarity=0.510 Sum_probs=33.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||.|.+|+++|.+|+++|++|+++|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 478999999999999999999999999999987764
No 234
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.90 E-value=0.078 Score=52.97 Aligned_cols=34 Identities=26% Similarity=0.526 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|||+|..|...|..|.+.|++|+++++..
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999999754
No 235
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=92.75 E-value=0.095 Score=63.02 Aligned_cols=36 Identities=28% Similarity=0.623 Sum_probs=33.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 679999999999999999999999999999987765
No 236
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=92.68 E-value=0.094 Score=63.91 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=33.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAP 202 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCch
Confidence 478999999999999999999999999999987764
No 237
>1wjt_A Transcription elongation factor S-II protein 3; four-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.48.3.1
Probab=92.55 E-value=0.029 Score=55.36 Aligned_cols=57 Identities=16% Similarity=0.343 Sum_probs=48.4
Q ss_pred HHHHHhhhhhcchhhHHHhcccccccccccccc-CchhHHHHHHHHHHHHHHHHHHHhh
Q 046008 1470 RHCVRLLVRVSTDLLAVRLSGIGKTVREKVCVH-TSRDIRAIASQLVSVWLEVFRKEKA 1527 (1624)
Q Consensus 1470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 1527 (1624)
.++|+-|--++-.+..++..+||++|.. +..| .+.+|+.+|+.|+..|...+..+..
T Consensus 34 l~~L~~L~~~~iT~e~L~~T~IGk~Vn~-LrKh~~~~~V~~lAk~Lv~~WK~~v~~~~~ 91 (103)
T 1wjt_A 34 LDLLKKLNSCQMSIQLLQTTRIGVAVNG-VRKHCSDKEVVSLAKVLIKNWKRLLDSPRT 91 (103)
T ss_dssp HHHHHHHHTSCCCHHHHHHTCHHHHHHH-HHHHCCCSHHHHHHHHHHHHHHHHTCCSCC
T ss_pred HHHHHHHhCCCCCHHHHHHcchhHHHHH-HHccCCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3566667778889999999999999976 8898 8899999999999999988865443
No 238
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.54 E-value=0.079 Score=51.28 Aligned_cols=35 Identities=34% Similarity=0.459 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQG-FSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g-~~v~vlE~~~ 894 (1624)
..++|+|+|+|..|..+|..|.+.| ++|+++++..
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 3578999999999999999999999 9999999754
No 239
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.44 E-value=0.1 Score=52.89 Aligned_cols=35 Identities=29% Similarity=0.444 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
+++|+|+|+|..|...|..|.+.|++|+++|+.+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 46899999999999999999999999999998643
No 240
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=92.26 E-value=0.12 Score=63.95 Aligned_cols=37 Identities=30% Similarity=0.486 Sum_probs=34.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 210 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA 210 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc
Confidence 5889999999999999999999999999999987754
No 241
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=92.20 E-value=0.096 Score=64.35 Aligned_cols=39 Identities=28% Similarity=0.501 Sum_probs=35.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGG 898 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG 898 (1624)
..++|+|||||+.|+.+|..|++.|.+|+|+|+.+++..
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 358899999999999999999999999999999887654
No 242
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.15 E-value=0.09 Score=64.36 Aligned_cols=35 Identities=34% Similarity=0.512 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|.|||.|.+|+++|.+|+++|++|+++|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 46899999999999999999999999999999865
No 243
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=91.96 E-value=0.13 Score=62.95 Aligned_cols=37 Identities=38% Similarity=0.526 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 4789999999999999999999999999999887654
No 244
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=91.89 E-value=0.13 Score=62.93 Aligned_cols=37 Identities=35% Similarity=0.561 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+++.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 214 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG 214 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC
Confidence 4789999999999999999999999999999877654
No 245
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=91.79 E-value=0.13 Score=63.34 Aligned_cols=38 Identities=32% Similarity=0.459 Sum_probs=34.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
..++|+|||||..|+.+|..|++.|.+|+|+|+.+++.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 230 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL 230 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh
Confidence 45789999999999999999999999999999987653
No 246
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=91.72 E-value=0.12 Score=63.39 Aligned_cols=37 Identities=22% Similarity=0.387 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l 221 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM 221 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc
Confidence 5799999999999999999999999999999877653
No 247
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=91.66 E-value=0.14 Score=62.59 Aligned_cols=36 Identities=36% Similarity=0.516 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRA 206 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 479999999999999999999999999999987654
No 248
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=91.65 E-value=0.16 Score=61.63 Aligned_cols=36 Identities=33% Similarity=0.596 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 184 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARV 184 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 578999999999999999999999999999986654
No 249
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=91.55 E-value=0.14 Score=59.73 Aligned_cols=36 Identities=25% Similarity=0.505 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||.+|+-+|..|++.|.+|+|+++.+++
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGL 201 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCC
Confidence 578999999999999999999999999999986543
No 250
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=91.37 E-value=0.17 Score=61.55 Aligned_cols=40 Identities=28% Similarity=0.457 Sum_probs=35.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGR 899 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~ 899 (1624)
..++|+|||||..|+.+|..|++.|.+|+|+|+.+++...
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 4578999999999999999999999999999998876543
No 251
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.26 E-value=0.14 Score=51.26 Aligned_cols=34 Identities=29% Similarity=0.498 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|+|+|..|...|..|.+.|++|+++++..
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999754
No 252
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.22 E-value=0.12 Score=63.03 Aligned_cols=37 Identities=41% Similarity=0.517 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+++.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l 213 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV 213 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc
Confidence 4799999999999999999999999999999877653
No 253
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=91.08 E-value=0.18 Score=60.54 Aligned_cols=37 Identities=32% Similarity=0.617 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
..++|+|||||..|+.+|..|++.|.+|+|+|+.+++
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 4688999999999999999999999999999986553
No 254
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=91.05 E-value=0.17 Score=57.56 Aligned_cols=35 Identities=23% Similarity=0.338 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.++|+|||+|+.|+.+|..|++.|.+|+++++.++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 48999999999999999999999999999997653
No 255
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=91.04 E-value=0.16 Score=61.79 Aligned_cols=37 Identities=24% Similarity=0.524 Sum_probs=34.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll 183 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN 183 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccc
Confidence 4789999999999999999999999999999987764
No 256
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.02 E-value=0.15 Score=59.83 Aligned_cols=34 Identities=21% Similarity=0.444 Sum_probs=30.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
...+|+|||||.-|..-|..++.+|++|+|+|..
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 4578999999999999999999999999999964
No 257
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=90.83 E-value=0.2 Score=61.49 Aligned_cols=37 Identities=22% Similarity=0.363 Sum_probs=34.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 221 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL 221 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc
Confidence 5789999999999999999999999999999887653
No 258
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.76 E-value=0.19 Score=62.16 Aligned_cols=37 Identities=24% Similarity=0.405 Sum_probs=34.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 212 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL 212 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC
Confidence 5799999999999999999999999999999877754
No 259
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.75 E-value=0.23 Score=51.25 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
..+|+|+|+|..|...|..|.+.|++|+++|+.
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 467999999999999999999999999999985
No 260
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=90.61 E-value=0.18 Score=57.33 Aligned_cols=36 Identities=39% Similarity=0.458 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||+|+.|+-+|..|++.|.+|+++++.+++
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 578999999999999999999999999999976543
No 261
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=90.57 E-value=0.22 Score=60.86 Aligned_cols=37 Identities=38% Similarity=0.504 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 210 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA 210 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc
Confidence 4799999999999999999999999999999877653
No 262
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=90.33 E-value=0.21 Score=60.91 Aligned_cols=36 Identities=33% Similarity=0.450 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||+.|+.+|..|++.|.+|+|+|+.+++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 578999999999999999999999999999986543
No 263
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=90.06 E-value=0.22 Score=61.25 Aligned_cols=37 Identities=35% Similarity=0.442 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 234 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL 234 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc
Confidence 5789999999999999999999999999999877653
No 264
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.01 E-value=0.24 Score=52.56 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQ-GFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~-g~~v~vlE~~~ 894 (1624)
...+|+|||+|..|..+|..|.+. |++|+++|+..
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 356899999999999999999999 99999999865
No 265
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=90.00 E-value=0.2 Score=57.47 Aligned_cols=37 Identities=27% Similarity=0.486 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
..++|+|||+|..|+-+|..|++.|.+|+|+++.+.+
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 3578999999999999999999999999999986543
No 266
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=89.92 E-value=0.22 Score=60.53 Aligned_cols=36 Identities=28% Similarity=0.558 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 184 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERV 184 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSST
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCch
Confidence 578999999999999999999999999999987654
No 267
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=89.85 E-value=0.27 Score=59.03 Aligned_cols=36 Identities=47% Similarity=0.643 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||..|+.+|..|++.|.+|+++|+.+++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 578999999999999999999999999999987765
No 268
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=89.83 E-value=0.28 Score=58.72 Aligned_cols=36 Identities=42% Similarity=0.636 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||+|..|+.+|..|++.|.+|+++|+.+++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 578999999999999999999999999999987654
No 269
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=89.82 E-value=0.23 Score=57.07 Aligned_cols=35 Identities=31% Similarity=0.511 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.++|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 47899999999999999999999999999997654
No 270
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=89.79 E-value=0.25 Score=60.43 Aligned_cols=36 Identities=19% Similarity=0.374 Sum_probs=33.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||..|+-+|..|++.|.+|+|+++.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKV 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcc
Confidence 578999999999999999999999999999987764
No 271
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=89.72 E-value=0.24 Score=61.72 Aligned_cols=37 Identities=27% Similarity=0.453 Sum_probs=33.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
..++|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 3578999999999999999999999999999987654
No 272
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=89.72 E-value=0.28 Score=59.88 Aligned_cols=37 Identities=27% Similarity=0.450 Sum_probs=33.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+++.+++.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 208 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL 208 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC
Confidence 5789999999999999999999999999999877653
No 273
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=89.64 E-value=0.23 Score=56.60 Aligned_cols=35 Identities=23% Similarity=0.403 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.++|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 179 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 57899999999999999999999999999997654
No 274
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.55 E-value=0.26 Score=57.34 Aligned_cols=34 Identities=29% Similarity=0.478 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|||+|.-|.+.|..|++.|++|+++.+..
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 3689999999999999999999999999999754
No 275
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=89.53 E-value=0.26 Score=60.39 Aligned_cols=37 Identities=11% Similarity=0.129 Sum_probs=34.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
..++|+|||||.+|+-+|..|++.|.+|+|+++++.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 3589999999999999999999999999999988764
No 276
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=89.52 E-value=0.24 Score=57.33 Aligned_cols=36 Identities=33% Similarity=0.509 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||+|..|+-+|..|++.|.+|+|+++.+++
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 588999999999999999999999999999976543
No 277
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.49 E-value=0.28 Score=56.47 Aligned_cols=33 Identities=27% Similarity=0.439 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
.++|+|||+|.-|...|..|+++|++|+++++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 468999999999999999999999999999864
No 278
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.24 E-value=0.26 Score=56.36 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
.++|+|||+|.-|...|..|+++|++|+++++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 368999999999999999999999999999864
No 279
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=89.22 E-value=0.32 Score=59.09 Aligned_cols=36 Identities=33% Similarity=0.559 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 182 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENL 182 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcc
Confidence 478999999999999999999999999999987765
No 280
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=89.09 E-value=0.25 Score=56.74 Aligned_cols=36 Identities=22% Similarity=0.451 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||+|..|+.+|..|++.|.+|+++++.+++
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~ 187 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF 187 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc
Confidence 578999999999999999999999999999986643
No 281
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=89.02 E-value=0.24 Score=62.02 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
..++|+|||+|.+|+-+|..|++.|.+|+||++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 468999999999999999999999999999998765
No 282
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=88.90 E-value=0.29 Score=61.48 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++++|||||+.|+-.|..+++.|.+|+|+++..
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~ 256 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSI 256 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccc
Confidence 4789999999999999999999999999998643
No 283
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=88.78 E-value=0.29 Score=55.98 Aligned_cols=36 Identities=28% Similarity=0.427 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
..++|+|||+|..|+.+|..|++.|.+|+++++.++
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 357899999999999999999999999999997654
No 284
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.55 E-value=0.35 Score=54.58 Aligned_cols=33 Identities=27% Similarity=0.288 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|.|||+|..|...|..|+++|++|+++++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 379999999999999999999999999998765
No 285
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=88.53 E-value=0.28 Score=56.86 Aligned_cols=34 Identities=41% Similarity=0.558 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|||+|.-|.+.|..|++.|++|+++.+..
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 3689999999999999999999999999999754
No 286
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=88.49 E-value=0.4 Score=58.55 Aligned_cols=36 Identities=42% Similarity=0.533 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+++.+++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF 215 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 578999999999999999999999999999987654
No 287
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=88.49 E-value=0.27 Score=61.79 Aligned_cols=36 Identities=25% Similarity=0.400 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
..++|+|||+|.+|+.+|..|++.|.+|+||++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 468999999999999999999999999999998765
No 288
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.44 E-value=0.27 Score=53.72 Aligned_cols=34 Identities=18% Similarity=0.431 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
++|+|||+|..|...|..|.+.|++|+++|+...
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4799999999999999999999999999997543
No 289
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=88.44 E-value=0.33 Score=56.77 Aligned_cols=35 Identities=29% Similarity=0.342 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHH-HHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLT-AARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~-aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.++|.|||.|.+|++ +|.+|.++|++|+++|++..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 578999999999996 88999999999999998654
No 290
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=88.35 E-value=0.29 Score=56.01 Aligned_cols=35 Identities=31% Similarity=0.451 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.++|+|||||..|+-+|..|++.|.+|+++++.++
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 47899999999999999999999999999997553
No 291
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.35 E-value=0.33 Score=55.50 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
+++|+|||+|..|...|..|++.|++|++++++.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3589999999999999999999999999998743
No 292
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=88.34 E-value=0.26 Score=61.85 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
..++|+|||+|.+|+.+|..|++.|.+|+||++.++
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 468999999999999999999999999999998765
No 293
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=88.31 E-value=0.31 Score=59.14 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=33.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCc-EEEEcccccC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFS-VTVLEARNRI 896 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~-v~vlE~~~~~ 896 (1624)
..++|+|||||.+|+-+|..|++.|.+ |+|+++.+.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 358899999999999999999999999 9999998654
No 294
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=88.27 E-value=0.31 Score=60.15 Aligned_cols=37 Identities=24% Similarity=0.274 Sum_probs=33.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ---GFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~---g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+.+|..|++. |.+|+|+|+.+++.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 230 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL 230 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc
Confidence 47999999999999999999999 99999999877653
No 295
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=88.26 E-value=0.34 Score=59.70 Aligned_cols=37 Identities=22% Similarity=0.218 Sum_probs=34.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC---CCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ---GFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~---g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+.+|..|++. |.+|+|+|+.+++.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 226 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL 226 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc
Confidence 47999999999999999999999 99999999987654
No 296
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=88.25 E-value=0.26 Score=59.81 Aligned_cols=37 Identities=16% Similarity=0.273 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccccC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARNRI 896 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~~~ 896 (1624)
..++|+|||||.+|+-+|..|++. |.+|+++++++.+
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 468999999999999999999999 8999999986653
No 297
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.20 E-value=0.42 Score=55.39 Aligned_cols=37 Identities=24% Similarity=0.290 Sum_probs=33.3
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 858 IDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 858 ~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
....++|.|||.|.-|...|..|++.|++|+++++..
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4456899999999999999999999999999999754
No 298
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=88.19 E-value=0.42 Score=60.12 Aligned_cols=38 Identities=29% Similarity=0.504 Sum_probs=34.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGG 898 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG 898 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++..
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 224 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP 224 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc
Confidence 57899999999999999999999999999999876643
No 299
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=88.14 E-value=0.39 Score=58.05 Aligned_cols=35 Identities=37% Similarity=0.529 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45799999999999999999999999999999764
No 300
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.10 E-value=0.34 Score=56.76 Aligned_cols=34 Identities=21% Similarity=0.434 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|||+|.-|...|..|+++||+|+++++.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999643
No 301
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=87.89 E-value=13 Score=43.45 Aligned_cols=43 Identities=9% Similarity=-0.041 Sum_probs=33.9
Q ss_pred hccccccceEEEEEecCCCCCCCCCCCcEEEEe-CCCc--EEEcCEEEEccChh
Q 046008 1112 ELLIHHNHVVTDISYSFKDSDLSDGQSRVKVST-SNGS--EFSGDAVLITVPLG 1162 (1624)
Q Consensus 1112 ~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~T-adGe--ti~AD~VIsAiP~~ 1162 (1624)
+++|+++++|+.|... +++.+.|++ .+|. +++||.||.|....
T Consensus 117 g~~i~~~~~v~~i~~~--------~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~ 162 (394)
T 1k0i_A 117 GATTVYQAAEVRLHDL--------QGERPYVTFERDGERLRLDCDYIAGCDGFH 162 (394)
T ss_dssp TCEEESSCEEEEEECT--------TSSSCEEEEEETTEEEEEECSEEEECCCTT
T ss_pred CCeEEeceeEEEEEEe--------cCCceEEEEecCCcEEEEEeCEEEECCCCC
Confidence 4589999999999873 234567776 6886 79999999998864
No 302
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=87.76 E-value=0.38 Score=53.68 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=32.9
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 858 IDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 858 ~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
.-..++|+|||||..|...|..|.+.|.+|+|+...
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 456799999999999999999999999999999754
No 303
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=87.76 E-value=0.37 Score=55.88 Aligned_cols=35 Identities=23% Similarity=0.335 Sum_probs=30.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..+++|.|||+|.-|...|..|+ +|++|+++++..
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 45799999999999999999999 999999999754
No 304
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.65 E-value=0.46 Score=51.96 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
..++|.|||+|..|.+.|..|++.|++|+++++...
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 467899999999999999999999999999998765
No 305
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=87.59 E-value=0.48 Score=58.41 Aligned_cols=37 Identities=24% Similarity=0.451 Sum_probs=33.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+|+.+++.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 218 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL 218 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 4789999999999999999999999999999877653
No 306
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=87.56 E-value=8.1 Score=49.45 Aligned_cols=42 Identities=29% Similarity=0.354 Sum_probs=33.0
Q ss_pred hccccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChh
Q 046008 1112 ELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLG 1162 (1624)
Q Consensus 1112 ~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~ 1162 (1624)
+++| +++.|+.|..+ ++..+.|.+.+|.++.||.||+|+...
T Consensus 139 GV~I-~~~~V~~L~~e--------~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 139 NLMI-FQQAVEDLIVE--------NDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp TEEE-EECCEEEEEES--------SSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred CCEE-EEEEEEEEEec--------CCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 4677 68899999873 233347888899899999999998863
No 307
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=87.55 E-value=0.45 Score=59.13 Aligned_cols=36 Identities=11% Similarity=0.263 Sum_probs=33.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
++|+|||||..|+.+|..|++.|.+|+|+|+.+++.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc
Confidence 899999999999999999999999999999877653
No 308
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=87.54 E-value=0.38 Score=60.68 Aligned_cols=33 Identities=33% Similarity=0.370 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
.++|+|||||..|+-+|..|++.|.+|+|+++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 357999999999999999999999999999975
No 309
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=87.47 E-value=0.35 Score=60.19 Aligned_cols=35 Identities=40% Similarity=0.448 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.++|+|||||.+|+-+|..|++.|.+|+|+++.++
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 57899999999999999999999999999997554
No 310
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.43 E-value=0.4 Score=59.23 Aligned_cols=36 Identities=25% Similarity=0.436 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...++|+|||+|.-|+..|..|+++|++|+++++..
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 457899999999999999999999999999999754
No 311
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=87.36 E-value=0.36 Score=56.30 Aligned_cols=36 Identities=25% Similarity=0.447 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||+|..|+.+|..|++.|.+|+++++.+.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 198 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEF 198 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCC
Confidence 578999999999999999999999999999986543
No 312
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=87.34 E-value=0.48 Score=58.07 Aligned_cols=38 Identities=32% Similarity=0.532 Sum_probs=33.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCc-EEEEcccccC
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFS-VTVLEARNRI 896 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~-v~vlE~~~~~ 896 (1624)
...++|+|||||..|+-+|..|.+.|.+ |+|++++++.
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 4578999999999999999999999984 9999876543
No 313
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=87.31 E-value=0.47 Score=53.74 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~ 189 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTF 189 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCC
Confidence 478999999999999999999999999999986543
No 314
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=87.23 E-value=0.41 Score=57.42 Aligned_cols=35 Identities=31% Similarity=0.417 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46799999999999999999999999999999764
No 315
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=87.11 E-value=0.42 Score=55.66 Aligned_cols=34 Identities=29% Similarity=0.495 Sum_probs=30.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|+|||+|.-|.+.|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 4678999999999999999999999999999 654
No 316
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=87.05 E-value=0.49 Score=58.17 Aligned_cols=37 Identities=16% Similarity=0.243 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
..-++|+|||+|.-|...|..|+++|++|+++|+...
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 3457899999999999999999999999999998665
No 317
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=86.83 E-value=0.47 Score=54.90 Aligned_cols=34 Identities=26% Similarity=0.446 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
.++|+|||||-.|.+.|+.|++.|+ +|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999999 999999864
No 318
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=86.73 E-value=0.5 Score=53.40 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.++|+|||+|..|+.+|..|++.|.+|+++++.++
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 47899999999999999999999999999997654
No 319
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=86.71 E-value=0.55 Score=57.67 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
.++|+|||||..|+-+|..|++.|.+|+|+++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 457999999999999999999999999999974
No 320
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=86.57 E-value=0.53 Score=55.14 Aligned_cols=33 Identities=30% Similarity=0.425 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
.++|+|||+|.-|.+.|..|+++|++|+++.+.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 368999999999999999999999999999974
No 321
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=86.52 E-value=0.38 Score=55.29 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
.++|+|||+|.-|.+.|..|++.|++|+++.|.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 368999999999999999999999999999876
No 322
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=86.44 E-value=10 Score=48.31 Aligned_cols=41 Identities=32% Similarity=0.386 Sum_probs=32.7
Q ss_pred hccccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccCh
Q 046008 1112 ELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPL 1161 (1624)
Q Consensus 1112 ~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~ 1161 (1624)
+++| +++.|+.|..+ ++..+.|.+.+|.+|.|+.||+|+..
T Consensus 138 GVeI-~~~~Vt~L~~e--------~g~V~GV~t~dG~~i~AdaVVLATG~ 178 (637)
T 2zxi_A 138 NLYI-KQEEVVDIIVK--------NNQVVGVRTNLGVEYKTKAVVVTTGT 178 (637)
T ss_dssp TEEE-EESCEEEEEES--------SSBEEEEEETTSCEEECSEEEECCTT
T ss_pred CCEE-EEeEEEEEEec--------CCEEEEEEECCCcEEEeCEEEEccCC
Confidence 4577 68899999873 23334688999999999999999985
No 323
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.39 E-value=0.48 Score=58.09 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
++|+|||+|..|+..|..|+++|++|+++++...
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 6899999999999999999999999999998753
No 324
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=86.35 E-value=0.56 Score=56.67 Aligned_cols=35 Identities=34% Similarity=0.503 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...+|+|||+|.+|+.+|..|...|.+|++++++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 46789999999999999999999999999999754
No 325
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=86.33 E-value=0.59 Score=58.07 Aligned_cols=33 Identities=30% Similarity=0.422 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
.++|+|||||..|+.+|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 356999999999999999999999999999973
No 326
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A
Probab=86.26 E-value=0.51 Score=55.14 Aligned_cols=59 Identities=20% Similarity=0.326 Sum_probs=50.7
Q ss_pred HHHHHHhh-hhhcchhhHHHhccccccccccccccCchhHHHHHHHHHHHHHHHHHHHhhh
Q 046008 1469 LRHCVRLL-VRVSTDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVSVWLEVFRKEKAS 1528 (1624)
Q Consensus 1469 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1528 (1624)
+.++|+-| --++-.+..|+..+||++|. ++..|...+|+.+|+.|+..|...+..++..
T Consensus 23 ~l~~L~~L~~~~~it~~~L~~T~IG~~Vn-~lrkh~~~~v~~~Ak~Li~~WK~~v~~~~~~ 82 (309)
T 1pqv_S 23 VLEILHVLDKEFVPTEKLLRETKVGVEVN-KFKKSTNVEISKLVKKMISSWKDAINKNKRS 82 (309)
T ss_pred HHHHHHHHHhcCCCCHHHHHhCChhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHhccC
Confidence 34556667 66677899999999999998 5999999999999999999999999887664
No 327
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=86.04 E-value=0.38 Score=55.24 Aligned_cols=36 Identities=33% Similarity=0.481 Sum_probs=32.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
-..++|+|||||-.|+..|..|.+.|++|+|++...
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 357899999999999999999999999999998764
No 328
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=85.92 E-value=0.56 Score=57.26 Aligned_cols=37 Identities=30% Similarity=0.493 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CCcEEEEcccccC
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQ-GFSVTVLEARNRI 896 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~-g~~v~vlE~~~~~ 896 (1624)
..++|+|||||..|+.+|..|++. |.+|+++|+.+++
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 357899999999999999999999 9999999986543
No 329
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=85.84 E-value=0.56 Score=57.67 Aligned_cols=35 Identities=29% Similarity=0.368 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|+|||+|.-|...|..|+++|++|+++++..
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 35689999999999999999999999999999754
No 330
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=85.83 E-value=0.63 Score=53.09 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
++|.|||+|..|...|..|+++|++|+++++...
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 6899999999999999999999999999997643
No 331
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=85.63 E-value=0.6 Score=52.23 Aligned_cols=37 Identities=30% Similarity=0.347 Sum_probs=32.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
...++|.|||+|.-|.+.|..|+++|++|+++++...
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 4568999999999999999999999999999998653
No 332
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=85.59 E-value=0.62 Score=54.40 Aligned_cols=35 Identities=31% Similarity=0.476 Sum_probs=31.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
...++|.|||+|.-|.+.|..|+++|++|+++.+.
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 45689999999999999999999999999999864
No 333
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=85.58 E-value=0.67 Score=55.54 Aligned_cols=35 Identities=34% Similarity=0.505 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 56899999999999999999999999999999764
No 334
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=85.55 E-value=0.56 Score=54.33 Aligned_cols=33 Identities=36% Similarity=0.450 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|||+|.-|.+.|..|+ .|++|+++.+..
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 468999999999999999999 999999998754
No 335
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=85.42 E-value=0.67 Score=56.48 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=33.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||..|+.+|..|++.|.+|+++++.+++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 578999999999999999999999999999987654
No 336
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=85.35 E-value=0.055 Score=71.41 Aligned_cols=63 Identities=8% Similarity=-0.142 Sum_probs=58.4
Q ss_pred chhhhhhhhhhhhccccCCCccccccc-----cccccccCCCCccccccCCCcC-Chhcccccchhhhhh
Q 046008 781 NEIRQKESVVDDCQQRVDSDPKASNRL-----VGVDVSCDDPSCGMVDGGTVPL-TIEERSESERVQSAS 844 (1624)
Q Consensus 781 ~~~~~~~~~~~~~~~~v~v~~~~~~~~-----~~~d~~~~~~~c~~v~~~r~~l-~p~~~~~~~~~~~~~ 844 (1624)
.++.||.|++..+++.++||++++|+| ++|+.++. +.++|++|+|+++ +|+++..+++|..+.
T Consensus 191 ~e~~~f~~~~~~~~~~~~~~~~~rn~i~~~w~~~P~~a~~-~~~~~~~~~r~~~~~p~~i~~~~~~~~~~ 259 (852)
T 2xag_A 191 QEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLT-FEATLQQLEAPYNSDTVLVHRVHSYLERH 259 (852)
T ss_dssp HHHHHCHHHHTSCHHHHHHHHHHHHHHHHHHHTCTTBCCC-HHHHHHHCCTTTTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhhhcCeeeEeecchhHHHhcCCHHHhh-HHHHHHhCCCcccCCcHHHHHHHHHHHHH
Confidence 677999999999999999999999999 99999976 8999999999999 999999999988765
No 337
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=85.33 E-value=0.61 Score=54.47 Aligned_cols=33 Identities=30% Similarity=0.345 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|+|||+|..|...|..|++.|++|+++++..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999998753
No 338
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=85.31 E-value=0.59 Score=53.23 Aligned_cols=36 Identities=19% Similarity=0.443 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||+|..|+.+|..|++.|.+|+++++.+++
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~ 189 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF 189 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC
Confidence 578999999999999999999999999999986543
No 339
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=85.15 E-value=0.61 Score=55.46 Aligned_cols=34 Identities=32% Similarity=0.442 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|||+|.-|.+.|..|++.|++|+++.+.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999754
No 340
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=85.10 E-value=0.73 Score=54.19 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
.++|+|||||-.|.+.|+.|+..|+ +|+++|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999999998 999999864
No 341
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=85.10 E-value=0.3 Score=49.82 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|||+|..|...|..|...|++|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 6889999999999999999999999999998753
No 342
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=85.03 E-value=0.75 Score=54.01 Aligned_cols=34 Identities=32% Similarity=0.502 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
.++|+|||||..|.+.|+.|+..|+ +|+++|...
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 4689999999999999999999999 999999864
No 343
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=85.02 E-value=0.71 Score=56.63 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRI 896 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~ 896 (1624)
.++|+|||||..|+.+|..|++.|.+|+++++.+++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 578999999999999999999999999999987654
No 344
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=84.70 E-value=0.73 Score=54.20 Aligned_cols=35 Identities=23% Similarity=0.410 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
+++|+|||||..|..+|+.+.+.|++|++++..+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 47899999999999999999999999999987543
No 345
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=84.68 E-value=0.69 Score=53.26 Aligned_cols=35 Identities=26% Similarity=0.354 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|.|||+|.-|...|..|++.|++|+++++..
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 35789999999999999999999999999998754
No 346
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=84.58 E-value=0.66 Score=57.31 Aligned_cols=36 Identities=28% Similarity=0.370 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHC-CC-cEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQ-GF-SVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~-g~-~v~vlE~~~~ 895 (1624)
..++|+|||+|.-|+..|..|+++ || +|+++++...
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 357899999999999999999999 99 9999998865
No 347
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=84.56 E-value=0.81 Score=56.06 Aligned_cols=33 Identities=33% Similarity=0.533 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
.++|+|||||..|+-+|..|++.|.+|+|+++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 468999999999999999999999999999873
No 348
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=84.55 E-value=0.7 Score=54.89 Aligned_cols=34 Identities=21% Similarity=0.434 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..+|+|+|+|.+|+.+|..|...|.+|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3799999999999999999999999999998764
No 349
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=84.51 E-value=0.6 Score=54.05 Aligned_cols=31 Identities=23% Similarity=0.351 Sum_probs=29.3
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEA 892 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~ 892 (1624)
++|+|||+|..|...|..|+++|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3799999999999999999999999999987
No 350
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=84.45 E-value=0.77 Score=53.43 Aligned_cols=34 Identities=24% Similarity=0.481 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
.++|+|||||..|.+.|..|++.|+ +|+++++..
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999999999 999999764
No 351
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=84.44 E-value=0.71 Score=56.60 Aligned_cols=94 Identities=15% Similarity=0.119 Sum_probs=52.0
Q ss_pred CCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHccCCCC---chhHHHHHHhhhcCCCCcchhhhhhhhHhHhhhh
Q 046008 1316 ENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGNDF---TAEVEAMEAAQMQSESEGDEVRDITRRLEAVELS 1392 (1624)
Q Consensus 1316 ~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1392 (1624)
++ ||.||+.... ..+.+..|+..|..+|..|+..|..+... ...-.+|...-...+....-+.+| +++++.|..
T Consensus 360 p~-vya~Gd~~~g-~~~~i~~a~~~g~~aa~~i~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~w-~~id~~e~~ 436 (460)
T 1cjc_A 360 PG-LYCSGWVKRG-PTGVITTTMTDSFLTGQILLQDLKAGHLPSGPRPGSAFIKALLDSRGVWPVSFSDW-EKLDAEEVS 436 (460)
T ss_dssp TT-EEECTHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHHTCSCCSCCCTHHHHHHHHHHHTCCCBCHHHH-HHHHHHHHH
T ss_pred CC-EEEEEeCCcC-CCccHHHHHHHHHHHHHHHHHHHHhCcCCCCCCCchhHHHHHHHHcCCCeecHHHH-HHHHHHHHH
Confidence 46 9999996532 34457889999999999999999764321 112223322211222222222444 466666655
Q ss_pred hhhhcccchhhhhHhHHHHHH
Q 046008 1393 NVLYKNSLDRALILTRESLLQ 1413 (1624)
Q Consensus 1393 ~~~~~~~~~~~~~~~~~~~~~ 1413 (1624)
..-.. .....++++.+.||+
T Consensus 437 ~g~~~-g~~r~k~~~~~~m~~ 456 (460)
T 1cjc_A 437 RGQAS-GKPREKLLDPQEMLR 456 (460)
T ss_dssp HHHHH-TSSCCCCCCHHHHHH
T ss_pred hhhhc-CCCceeeCCHHHHHH
Confidence 43321 111224566676665
No 352
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=84.25 E-value=0.7 Score=53.81 Aligned_cols=35 Identities=29% Similarity=0.569 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|.|||.|..|...|..|++.|++|+++++..
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 45799999999999999999999999999999754
No 353
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=84.15 E-value=0.83 Score=55.98 Aligned_cols=37 Identities=27% Similarity=0.431 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
...-+|+|||.|.-|+..|..|+++||+|+++++...
T Consensus 6 ~~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 6 HGSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3567999999999999999999999999999998765
No 354
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=84.03 E-value=0.63 Score=53.08 Aligned_cols=34 Identities=32% Similarity=0.390 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
++|.|||.|.-|...|..|++.||+|+++++...
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999987543
No 355
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=83.90 E-value=0.79 Score=56.54 Aligned_cols=41 Identities=15% Similarity=0.333 Sum_probs=34.3
Q ss_pred hccccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccCh
Q 046008 1112 ELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPL 1161 (1624)
Q Consensus 1112 ~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~ 1161 (1624)
+++|++++.|++|.. +++.+.|++.+|+++.||.||+++..
T Consensus 240 GV~v~~~~~V~~i~~---------~~~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 240 GVKVMPNAIVQSVGV---------SSGKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp TCEEECSCCEEEEEE---------ETTEEEEEETTSCEEEESEEEECCCE
T ss_pred CCEEEeCCEEEEEEe---------cCCeEEEEECCCCEEECCEEEECCCC
Confidence 467899999999976 24467888899999999999999885
No 356
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=83.79 E-value=0.86 Score=49.95 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|+|||+|..|...|..|++.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999998764
No 357
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=83.52 E-value=0.65 Score=56.49 Aligned_cols=33 Identities=27% Similarity=0.417 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|+|||+|..|+..|..|+++|++|+++++..
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999999754
No 358
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=83.51 E-value=0.72 Score=52.87 Aligned_cols=34 Identities=29% Similarity=0.505 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|.|||+|..|...|..|++.|++|+++++..
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4789999999999999999999999999998754
No 359
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=83.29 E-value=0.88 Score=52.76 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
++|+|||||..|.+.|+.|+..|+ +|+++|...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 479999999999999999999999 999999765
No 360
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=83.26 E-value=0.64 Score=52.01 Aligned_cols=33 Identities=27% Similarity=0.297 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|||+|..|+.+|..|++.| +|+++++..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 578999999999999999999999 999998643
No 361
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=83.15 E-value=0.98 Score=54.37 Aligned_cols=41 Identities=27% Similarity=0.497 Sum_probs=36.3
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCC---cEEEEcccc-cCCCcc
Q 046008 860 VKKRIIVIGA-GPAGLTAARHLQRQGF---SVTVLEARN-RIGGRV 900 (1624)
Q Consensus 860 ~~~~v~IiGa-G~aGl~aA~~L~~~g~---~v~vlE~~~-~~GG~~ 900 (1624)
...+|+|||| |.+|+.|+..+...|. .|+++|.+. ..||+.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~~ 258 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGPF 258 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSCC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCch
Confidence 4678999999 9999999999999998 999999986 557763
No 362
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=83.06 E-value=0.69 Score=53.20 Aligned_cols=35 Identities=26% Similarity=0.277 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.++|.|||.|.-|...|..|+++||+|+++++...
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998654
No 363
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=83.03 E-value=0.88 Score=54.16 Aligned_cols=35 Identities=26% Similarity=0.506 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|+|+|+|..|+.+|..|+..|++|++++++.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35889999999999999999999999999999754
No 364
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=82.85 E-value=1 Score=51.21 Aligned_cols=35 Identities=29% Similarity=0.268 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|+|+|+|-.|.++|+.|++.|.+|+|+.|..
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 35789999999999999999999999999998763
No 365
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=82.19 E-value=0.91 Score=56.17 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.++|.|||+|.-|...|..|+++|++|+++++...
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 46899999999999999999999999999997653
No 366
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=82.03 E-value=1 Score=53.90 Aligned_cols=35 Identities=43% Similarity=0.562 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 46899999999999999999999999999999754
No 367
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=82.01 E-value=1.1 Score=54.91 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=33.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
..+.+|+|||.|-.||..|..|+++||+|+.||-...
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 4567999999999999999999999999999997643
No 368
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=82.00 E-value=1.2 Score=52.16 Aligned_cols=34 Identities=21% Similarity=0.447 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
.++|+|||||-.|.+.|+.|+..|+ +|+++|...
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4689999999999999999999998 999999754
No 369
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=81.66 E-value=1 Score=58.49 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|.|||+|.-|...|+.|+++|++|+++++..
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 45689999999999999999999999999999743
No 370
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=81.62 E-value=1.1 Score=52.17 Aligned_cols=35 Identities=23% Similarity=0.257 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-CcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQG-FSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g-~~v~vlE~~~ 894 (1624)
..++|.|||.|.-|...|..|++.| ++|+++++..
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4578999999999999999999999 9999999754
No 371
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=81.45 E-value=1.2 Score=51.78 Aligned_cols=33 Identities=33% Similarity=0.483 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~ 894 (1624)
++|+|||||..|.+.|+.|+.. |++|+++|+..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999995 79999999864
No 372
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=81.42 E-value=0.97 Score=55.14 Aligned_cols=35 Identities=20% Similarity=0.307 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
..++|+|||+|.-|+..|..|++ |++|+++++...
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 45689999999999999999998 999999998654
No 373
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=81.27 E-value=1.2 Score=51.57 Aligned_cols=35 Identities=29% Similarity=0.386 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|.|||.|.-|...|..|++.|++|+++++..
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999998754
No 374
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=81.08 E-value=1.3 Score=51.82 Aligned_cols=33 Identities=33% Similarity=0.526 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~ 893 (1624)
.++|+|||+|..|.+.|+.|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4689999999999999999999999 99999986
No 375
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=81.01 E-value=0.85 Score=52.24 Aligned_cols=31 Identities=26% Similarity=0.343 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHC-----C-CcEEEEcc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQ-----G-FSVTVLEA 892 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~-----g-~~v~vlE~ 892 (1624)
++|.|||+|.-|...|..|++. | ++|+++.+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999999 9 99999986
No 376
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=81.01 E-value=1.3 Score=51.43 Aligned_cols=34 Identities=32% Similarity=0.547 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
+++|+|||||-.|.+.|+.|+..|+ +|+++|...
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 3689999999999999999999997 999999653
No 377
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=80.90 E-value=1 Score=51.60 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=29.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
..++|+|||+|.+|+-+|..|++.| +|+++.++
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 3578999999999999999999998 69999875
No 378
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=80.62 E-value=0.55 Score=55.80 Aligned_cols=36 Identities=11% Similarity=0.111 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCC-------CcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQG-------FSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g-------~~v~vlE~~~~ 895 (1624)
..++|+|||+|.-|.+.|..|+++| ++|+++++...
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 3468999999999999999999999 99999987544
No 379
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=80.61 E-value=0.9 Score=49.94 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEE-Ecccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTV-LEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~v-lE~~~ 894 (1624)
.++|.|||+|.-|.+.|..|++.|++|++ +++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 46899999999999999999999999998 87654
No 380
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=80.59 E-value=1.1 Score=58.13 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=32.5
Q ss_pred CCCcEEEEC--CCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIG--AGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiG--aG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 467999999 99999999999999999999999866
No 381
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=80.49 E-value=1.4 Score=50.74 Aligned_cols=34 Identities=29% Similarity=0.413 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|.|||+|..|...|..|++.|++|+++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4789999999999999999999999999998753
No 382
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=80.49 E-value=1.2 Score=48.21 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=30.0
Q ss_pred CcEEEEC-CCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIG-AGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiG-aG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|+||| +|..|...|..|.+.|++|+++++..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3699999 99999999999999999999998753
No 383
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=80.35 E-value=0.9 Score=54.79 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|+|||+|..|+..|..|++ |++|+++++..
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999999754
No 384
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=80.35 E-value=1 Score=54.07 Aligned_cols=36 Identities=36% Similarity=0.468 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
-...+|+|+|||.+|+.+|..|...|. +|+++|+..
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 345799999999999999999999999 899999874
No 385
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=80.12 E-value=1.3 Score=52.75 Aligned_cols=34 Identities=26% Similarity=0.420 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|.|||.|.-|...|..|+++|++|+++++..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4789999999999999999999999999998743
No 386
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=80.07 E-value=1.5 Score=50.15 Aligned_cols=34 Identities=29% Similarity=0.531 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|||+|-+|.++|+.|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6899999999999999999999999999998764
No 387
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=79.98 E-value=0.3 Score=59.40 Aligned_cols=60 Identities=12% Similarity=0.017 Sum_probs=47.9
Q ss_pred hhhhhhhcccc--CCCccccccccccccc---cCCCCccccccCCCcC-Chhc---------ccccchhhhhhhhhc
Q 046008 787 ESVVDDCQQRV--DSDPKASNRLVGVDVS---CDDPSCGMVDGGTVPL-TIEE---------RSESERVQSASCDDA 848 (1624)
Q Consensus 787 ~~~~~~~~~~v--~v~~~~~~~~~~~d~~---~~~~~c~~v~~~r~~l-~p~~---------~~~~~~~~~~~~~~~ 848 (1624)
...++.+++.+ +||||.+++|.+++.+ +++ ||+|.++|++| +|.+ ..+..|+.|+.|...
T Consensus 305 ~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~--aDlVaiGR~~IanPdlv~ki~~G~~~~I~~ci~~~~~~~~ 379 (419)
T 3l5a_A 305 RPVNQIVYEHLAGRIPLIASGGINSPESALDALQH--ADMVGMSSPFVTEPDFVHKLAEQRPHDINLEFSMADLEDL 379 (419)
T ss_dssp SBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG--CSEEEESTHHHHCTTHHHHHHTTCGGGCCCCCCGGGTTTT
T ss_pred HHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh--CCcHHHHHHHHHCcHHHHHHHcCCcccceecCCHHHHHHc
Confidence 35677888877 6999999999888777 665 99999999999 9998 345678887765543
No 388
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=79.88 E-value=1.2 Score=50.12 Aligned_cols=33 Identities=27% Similarity=0.569 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~ 893 (1624)
..+|+|||+|-.|..+|.+|++.|. +++|++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 5789999999999999999999997 79999964
No 389
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=79.82 E-value=1.3 Score=49.91 Aligned_cols=32 Identities=28% Similarity=0.426 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
++|.|||+|..|.+.|..|.+.|++|+++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 36999999999999999999999999999864
No 390
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=79.72 E-value=1.2 Score=49.86 Aligned_cols=32 Identities=19% Similarity=0.398 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-CcEEEEccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQG-FSVTVLEAR 893 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g-~~v~vlE~~ 893 (1624)
++|.|||+|.-|...|..|++.| ++|+++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 36999999999999999999999 999999864
No 391
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=79.58 E-value=1.6 Score=51.19 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
..+|+|||||..|.+.|+.|+..|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999999 999999765
No 392
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=79.50 E-value=1.4 Score=50.90 Aligned_cols=35 Identities=26% Similarity=0.240 Sum_probs=31.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
..++|+|||+|.+|.++|+.|++.|+ +|+|+.|..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45789999999999999999999998 899998763
No 393
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=79.50 E-value=1.2 Score=50.86 Aligned_cols=35 Identities=14% Similarity=0.214 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|+|+|+|-+|.++|+.|++.|.+|+|+.|..
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45789999999999999999999999999998763
No 394
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=79.48 E-value=0.78 Score=54.14 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 863 RIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 863 ~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
+|+|||+|.-|.+.|..|+++|++|+++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999998753
No 395
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=79.44 E-value=1.5 Score=50.44 Aligned_cols=36 Identities=28% Similarity=0.374 Sum_probs=32.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...++|.|||+|..|..+|..|...|++|+++++..
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 356899999999999999999999999999999764
No 396
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=79.31 E-value=1.2 Score=51.54 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=30.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEAR 893 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~ 893 (1624)
..++|.|||.|.-|...|..|++.|+ +|+++++.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 35789999999999999999999999 99999975
No 397
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=79.30 E-value=0.79 Score=61.40 Aligned_cols=37 Identities=30% Similarity=0.383 Sum_probs=34.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
.++|+|||+|+.|+-+|..|++.|.+|+|+|+++++.
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 5789999999999999999999999999999988764
No 398
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.24 E-value=1.5 Score=49.62 Aligned_cols=33 Identities=24% Similarity=0.529 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
++|.|||+|..|.+.|..|++.|+ +|+++++..
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 579999999999999999999999 899998753
No 399
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=79.22 E-value=1.4 Score=53.97 Aligned_cols=94 Identities=11% Similarity=0.029 Sum_probs=52.4
Q ss_pred CCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHccC-------CCCchhHHHHHHhhhcCCCCcchhhhhhhhHhH
Q 046008 1316 ENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTG-------NDFTAEVEAMEAAQMQSESEGDEVRDITRRLEA 1388 (1624)
Q Consensus 1316 ~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1388 (1624)
+| ||.||+.+.. ..+.+.-|+..|..+|..|+..|..+ ........++..--...+.......+| +++++
T Consensus 352 pg-vya~GD~~~g-p~~~i~~a~~~g~~~a~~i~~~l~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~w-~~id~ 428 (456)
T 1lqt_A 352 PN-EYVVGWIKRG-PTGVIGTNKKDAQDTVDTLIKNLGNAKEGAECKSFPEDHADQVADWLAARQPKLVTSAHW-QVIDA 428 (456)
T ss_dssp SS-EEECTHHHHC-SCSCTTHHHHHHHHHHHHHHHHHHHHHHTTCSCCC--CHHHHHHHHHHHHCTTCEEHHHH-HHHHH
T ss_pred CC-EEEEeccCCC-CchhHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCchHHHHHHHHHcCCCeecHHHH-HHHHH
Confidence 46 9999986542 23346669999999999999988653 111223333333222222222223555 46777
Q ss_pred hhhhhhhhcccchhhhhHhHHHHHH
Q 046008 1389 VELSNVLYKNSLDRALILTRESLLQ 1413 (1624)
Q Consensus 1389 ~~~~~~~~~~~~~~~~~~~~~~~~~ 1413 (1624)
.|....-.. .....++++.+.||+
T Consensus 429 ~e~~~g~~~-g~~r~k~~~~~~m~~ 452 (456)
T 1lqt_A 429 FERAAGEPH-GRPRVKLASLAELLR 452 (456)
T ss_dssp HHHHHHGGG-TSSCCCCCSHHHHHH
T ss_pred HHHHhhhhc-CCCceeeCCHHHHHH
Confidence 766644322 112335667777776
No 400
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=79.08 E-value=1.5 Score=59.03 Aligned_cols=34 Identities=26% Similarity=0.411 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
..+|+|||||..|+-+|..|++.|. +|+|+++++
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 4589999999999999999999996 899999876
No 401
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=79.05 E-value=1.3 Score=53.03 Aligned_cols=35 Identities=23% Similarity=0.435 Sum_probs=32.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEAR 893 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~ 893 (1624)
-...+|+|+|||.+|..+|..|...|. +|+|+++.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 356899999999999999999999998 79999986
No 402
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=79.02 E-value=1.6 Score=50.14 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...++|.|||+|..|..+|..|...|++|+++++..
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 346899999999999999999999999999999764
No 403
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=78.98 E-value=1.4 Score=53.40 Aligned_cols=35 Identities=29% Similarity=0.441 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
..+|+|||.|..|...|..|...|++|+|+|....
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46799999999999999999999999999998754
No 404
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=78.98 E-value=1.3 Score=51.16 Aligned_cols=33 Identities=30% Similarity=0.464 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC--CcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQG--FSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g--~~v~vlE~~~ 894 (1624)
++|+|||+|-.|.+.|+.|+++| ++|+++++..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 58999999999999999999999 7999999864
No 405
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=78.93 E-value=1.7 Score=49.45 Aligned_cols=34 Identities=21% Similarity=0.451 Sum_probs=31.0
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGA-GPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGa-G~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|.|||+ |..|...|..|++.|++|+++++..
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 468999999 9999999999999999999998643
No 406
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=78.86 E-value=1.6 Score=50.13 Aligned_cols=35 Identities=26% Similarity=0.552 Sum_probs=31.4
Q ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIG-AGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiG-aG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|.||| +|.-|.+.|..|++.|++|+++++..
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 346899999 99999999999999999999998654
No 407
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=78.77 E-value=0.73 Score=56.63 Aligned_cols=36 Identities=28% Similarity=0.457 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
..++|+|+|+|--|...|..|...||+|+|+|+...
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 357899999999999999999999999999998654
No 408
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=78.70 E-value=44 Score=42.41 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=30.0
Q ss_pred CCeEEEecCCccCC---CCCcHHHHHHHHHHHHHHHHHHHcc
Q 046008 1316 ENCLFFAGEATCKE---HPDTVGGAMLSGLREAVRIIDILTT 1354 (1624)
Q Consensus 1316 ~grLyFAGEaTs~~---~~GtVEGAi~SGiRAA~~IL~~L~~ 1354 (1624)
.+|++++||+.... .+..++-||..+...|..|...+++
T Consensus 341 ~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g 382 (639)
T 2dkh_A 341 LPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRK 382 (639)
T ss_dssp CCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTT
T ss_pred cCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcC
Confidence 45699999997643 2235788999999888888888864
No 409
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=78.49 E-value=1.4 Score=49.38 Aligned_cols=35 Identities=17% Similarity=0.292 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++++|+|+|||..|...+..|.++|++|+++.|..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 35789999999999999999999999999998754
No 410
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=78.36 E-value=1.3 Score=50.36 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|.|||+|..|...|..|.+.|++|+++++..
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998743
No 411
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=78.32 E-value=1.4 Score=51.40 Aligned_cols=33 Identities=24% Similarity=0.493 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
++|+|||+|-.|.+.|..|++.|+ +|+++++..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 479999999999999999999999 999999864
No 412
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=78.21 E-value=0.99 Score=54.04 Aligned_cols=30 Identities=27% Similarity=0.373 Sum_probs=28.2
Q ss_pred CcEEEECCCHHHHHHHHHHHH-CCCcEEEEc
Q 046008 862 KRIIVIGAGPAGLTAARHLQR-QGFSVTVLE 891 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~-~g~~v~vlE 891 (1624)
++|+|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 589999999999999999998 599999998
No 413
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=78.12 E-value=1.4 Score=57.05 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.-++|.|||+|.-|...|..|+++|++|+++++..
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 45689999999999999999999999999999754
No 414
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=78.04 E-value=1.7 Score=50.58 Aligned_cols=34 Identities=24% Similarity=0.500 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
.++|.|||+|..|.+.|..|.+.|+ +|+++++..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4789999999999999999999999 999999764
No 415
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=78.00 E-value=1.5 Score=49.78 Aligned_cols=33 Identities=21% Similarity=0.426 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|.|||+|.-|...|..|.+.|++|+++++..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999998753
No 416
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.97 E-value=1.9 Score=47.12 Aligned_cols=37 Identities=19% Similarity=0.291 Sum_probs=31.8
Q ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 859 DVKKRIIVIGA-GPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 859 ~~~~~v~IiGa-G~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
-..++|+|.|| |-.|...|..|.++|++|+++.|+..
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 34688999998 99999999999999999999987643
No 417
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=77.90 E-value=1.9 Score=48.07 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC----cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF----SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~----~v~vlE~~~ 894 (1624)
.++|.|||+|.-|...|..|.++|+ +|++++++.
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 3689999999999999999999998 999999864
No 418
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=77.85 E-value=1.5 Score=53.83 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=32.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
-..++|+|||||..|+..|..|.+.|.+|+|++..
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 34689999999999999999999999999999864
No 419
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=77.66 E-value=1.4 Score=49.80 Aligned_cols=32 Identities=31% Similarity=0.507 Sum_probs=29.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|.|||+|..|...|..|++ |++|+++++..
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999998643
No 420
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=77.59 E-value=1.5 Score=49.90 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|.|||+|..|...|..|.+.|++|+++++..
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999998753
No 421
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=77.57 E-value=2.1 Score=48.18 Aligned_cols=34 Identities=38% Similarity=0.562 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
+++|+|+|+|..|...+..|.++|++|+++.+..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4689999999999999999999999999998754
No 422
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=77.46 E-value=1.1 Score=52.51 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC-------CcEEEEccccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQG-------FSVTVLEARNR 895 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g-------~~v~vlE~~~~ 895 (1624)
++|+|||+|.-|.+.|..|+++| ++|+++++...
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999999 99999997654
No 423
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=77.42 E-value=1.6 Score=56.04 Aligned_cols=38 Identities=18% Similarity=0.329 Sum_probs=34.1
Q ss_pred CCCcEEEEC--CCHHHHHHHHHHHHCCCcEEEEcccccCC
Q 046008 860 VKKRIIVIG--AGPAGLTAARHLQRQGFSVTVLEARNRIG 897 (1624)
Q Consensus 860 ~~~~v~IiG--aG~aGl~aA~~L~~~g~~v~vlE~~~~~G 897 (1624)
..++|+||| ||..|+.+|..|++.|.+|+|+++.+.+.
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~ 561 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVS 561 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccc
Confidence 457899999 99999999999999999999999877654
No 424
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=77.37 E-value=2.1 Score=50.42 Aligned_cols=35 Identities=17% Similarity=0.376 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
...+|+|||+|..|.++|+.|+..|+ +|+++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 56899999999999999999999997 899999754
No 425
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=77.35 E-value=1.5 Score=54.17 Aligned_cols=34 Identities=21% Similarity=0.434 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~ 894 (1624)
.++|+|||+|..|+..|..|+++ |++|+++++..
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 79999999754
No 426
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=77.35 E-value=1.7 Score=53.58 Aligned_cols=36 Identities=31% Similarity=0.316 Sum_probs=32.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
-..+.|+|+|+|..|..+|..|+..|.+|+++|+.+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 357899999999999999999999999999999764
No 427
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=77.31 E-value=2 Score=45.92 Aligned_cols=33 Identities=30% Similarity=0.437 Sum_probs=29.7
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGA-GPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGa-G~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|+|+|| |..|...+..|.++|++|+++.|+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 46999996 9999999999999999999998753
No 428
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=77.26 E-value=1.9 Score=53.49 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
....+|.|||+|.-|...|..|+++|++|+++++..
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457899999999999999999999999999999864
No 429
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=77.22 E-value=1.4 Score=54.85 Aligned_cols=35 Identities=23% Similarity=0.455 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 46899999999999999999999999999999754
No 430
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=76.84 E-value=1.5 Score=50.73 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=29.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
+.+||.+||-|.-|...|..|.++||+|++|++...
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 346899999999999999999999999999997653
No 431
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=76.84 E-value=1.7 Score=50.48 Aligned_cols=36 Identities=19% Similarity=0.481 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~~ 895 (1624)
..++|+|||||..|.++|+.|+.+|+ +|+|+|....
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 35789999999999999999999999 9999998653
No 432
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=76.75 E-value=1.8 Score=48.26 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC----CcEEEEccccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQG----FSVTVLEARNR 895 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g----~~v~vlE~~~~ 895 (1624)
++|.|||+|.-|.+.|..|++.| ++|+++++...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 58999999999999999999999 79999987654
No 433
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=76.68 E-value=2 Score=50.11 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
+.+|+|||||-.|.++|+.|+..|+ +|+++|...
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4789999999999999999999998 899999753
No 434
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=76.52 E-value=1.6 Score=50.58 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
++|+|||||..|.+.|+.|+..|+ +|++++...
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999998 899999765
No 435
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=76.51 E-value=1.9 Score=50.60 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
...+|+|||+|..|.++|+.|+..|+ +|+++|...
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 35789999999999999999999997 899999753
No 436
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=76.50 E-value=2.1 Score=50.64 Aligned_cols=35 Identities=20% Similarity=0.320 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|.|||.|.-|-+.|..|.+.|++|+++++..
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999764
No 437
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=76.32 E-value=2.3 Score=49.81 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
.++|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999998 999999765
No 438
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=76.08 E-value=1.6 Score=53.72 Aligned_cols=34 Identities=29% Similarity=0.411 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~~ 894 (1624)
.++|+|||+|..|+..|..|+++ |++|+++++..
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999999 89999999754
No 439
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=76.07 E-value=1.7 Score=53.64 Aligned_cols=35 Identities=23% Similarity=0.473 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.+++|.|||+|.-|...|..|+++|++|+++++..
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35789999999999999999999999999999864
No 440
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=75.97 E-value=1.5 Score=54.21 Aligned_cols=36 Identities=22% Similarity=0.397 Sum_probs=31.1
Q ss_pred CCCCcEEEECCCHHHHH-HHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLT-AARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~-aA~~L~~~g~~v~vlE~~~ 894 (1624)
...++|.|||.|-+|++ +|.+|.++|++|++.|.+.
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 34689999999999997 6999999999999999753
No 441
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=75.95 E-value=1.7 Score=53.97 Aligned_cols=35 Identities=34% Similarity=0.547 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHHCC--------------CcEEEEcccccC
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQG--------------FSVTVLEARNRI 896 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g--------------~~v~vlE~~~~~ 896 (1624)
..|+|||||+.|+.+|..|++.+ .+|+|+|+.+++
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 57999999999999999888643 579999987765
No 442
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=75.84 E-value=2.2 Score=52.84 Aligned_cols=35 Identities=20% Similarity=0.339 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
+++|.|||.|.-|...|..|+++||+|+++++...
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 443
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=75.64 E-value=1.9 Score=49.12 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|||+|..|.+.|+.|.+.|++|+++.+..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 5789999999999999999999999999999763
No 444
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=75.60 E-value=0.92 Score=50.89 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|.|||+|.-|.+.|..|.++|++|+++.+..
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~ 39 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE 39 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH
Confidence 45689999999999999999999999999998753
No 445
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=75.36 E-value=2.2 Score=45.88 Aligned_cols=33 Identities=30% Similarity=0.461 Sum_probs=29.9
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGA-GPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGa-G~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|+|+|| |..|...|..|.++|++|+++.|..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 36999998 9999999999999999999998754
No 446
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=75.33 E-value=1.2 Score=49.00 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=30.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
...+|+|||+|..|...|..|.+.|+ |+++|+...
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 45789999999999999999999999 999998654
No 447
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=75.00 E-value=25 Score=43.16 Aligned_cols=51 Identities=10% Similarity=-0.002 Sum_probs=37.4
Q ss_pred HHHHHHhh-----hccccccceEEEEEecCCCCCCCCCCCcEEEEe---CCCc--EEEcCEEEEccChhh
Q 046008 1104 TVVEALGK-----ELLIHHNHVVTDISYSFKDSDLSDGQSRVKVST---SNGS--EFSGDAVLITVPLGC 1163 (1624)
Q Consensus 1104 sLveALAe-----~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~T---adGe--ti~AD~VIsAiP~~v 1163 (1624)
.++.+|++ +++|+++++|+.|..+ ++.+.|++ .+|+ +++||.||.|+.+..
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~---------~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARRE---------NGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEE---------TTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEe---------CCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 44455543 3489999999999883 34566766 3675 789999999998763
No 448
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=74.99 E-value=2.1 Score=55.61 Aligned_cols=36 Identities=28% Similarity=0.366 Sum_probs=32.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..-++|.|||||.-|-..|+.++.+|++|+|+|..+
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 345799999999999999999999999999999654
No 449
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=74.97 E-value=2.3 Score=51.81 Aligned_cols=36 Identities=28% Similarity=0.270 Sum_probs=33.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...++|+|||.|..|..+|..|...|.+|+++|+.+
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 357899999999999999999999999999999754
No 450
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=74.90 E-value=2 Score=48.00 Aligned_cols=30 Identities=30% Similarity=0.369 Sum_probs=27.8
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcc
Q 046008 863 RIIVIGAGPAGLTAARHLQRQGFSVTVLEA 892 (1624)
Q Consensus 863 ~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~ 892 (1624)
+|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999998754
No 451
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=74.88 E-value=1.6 Score=49.65 Aligned_cols=31 Identities=29% Similarity=0.384 Sum_probs=28.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLE 891 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE 891 (1624)
+++|.|||+|..|...|..|++.|++|++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 3689999999999999999999999999997
No 452
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=74.76 E-value=2.4 Score=49.36 Aligned_cols=33 Identities=18% Similarity=0.299 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCC----CcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQG----FSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g----~~v~vlE~~ 893 (1624)
.++|.|||+|.-|.+.|..|.+.| ++|+++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 457999999999999999999999 899999864
No 453
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=74.71 E-value=2.1 Score=52.76 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|.|||+|.-|...|..|+++|++|+++++..
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999754
No 454
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=74.58 E-value=2.5 Score=49.61 Aligned_cols=33 Identities=33% Similarity=0.458 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
.++|+|||+|..|.+.|..|++.|++|+++++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~ 48 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRS 48 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECC
Confidence 468999999999999999999999999998864
No 455
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=74.49 E-value=1.9 Score=48.08 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
+++|.|||+|..|...|..|.+.|+.|.++++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 368999999999999999999999999999864
No 456
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=74.47 E-value=2.7 Score=47.59 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=29.9
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGA-GPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGa-G~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
+||+|.|| |..|...+.+|.++||+|+++-|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 57999998 9999999999999999999997643
No 457
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=74.47 E-value=2.4 Score=52.38 Aligned_cols=33 Identities=21% Similarity=0.346 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|.|||+|.-|...|..|+++|++|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999998754
No 458
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=74.43 E-value=2.7 Score=44.29 Aligned_cols=33 Identities=39% Similarity=0.649 Sum_probs=30.5
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGA-GPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGa-G~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|+|+|| |-.|...+..|.++|++|+++.|..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999998 9999999999999999999998754
No 459
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=74.33 E-value=1.9 Score=49.47 Aligned_cols=36 Identities=25% Similarity=0.254 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~~ 895 (1624)
..++|+|||+|-+|.++|+.|++.|. +|+|+.|...
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 35789999999999999999999999 8999987653
No 460
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=74.31 E-value=2.9 Score=49.19 Aligned_cols=36 Identities=17% Similarity=0.416 Sum_probs=32.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
....+|+|||+|..|.++|+.|+.+|+ +++|+|...
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 456899999999999999999999998 899999753
No 461
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=74.20 E-value=2.2 Score=50.10 Aligned_cols=36 Identities=19% Similarity=0.439 Sum_probs=31.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
...++|+|||+|..|.++|+.|+..|+ +++|+|...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 345789999999999999999999988 899999743
No 462
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=73.87 E-value=2.4 Score=52.55 Aligned_cols=36 Identities=28% Similarity=0.377 Sum_probs=32.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...++|+|||+|..|+.+|..|...|++|+++|+..
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457899999999999999999999999999999754
No 463
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=73.44 E-value=2 Score=52.39 Aligned_cols=36 Identities=19% Similarity=0.400 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
...+..|||.|.-|+..|..|+++||+|+++++...
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 456899999999999999999999999999998754
No 464
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=73.41 E-value=2.4 Score=51.10 Aligned_cols=35 Identities=34% Similarity=0.523 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
..++|+|||+|..|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 46889999999999999999999998 899998764
No 465
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=73.41 E-value=3 Score=48.02 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
..++|+|+|+|-+|.++|+.|++.|. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 46899999999999999999999998 699998753
No 466
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=73.22 E-value=2.9 Score=48.96 Aligned_cols=34 Identities=18% Similarity=0.427 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEAR 893 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~ 893 (1624)
..++|+|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 46899999999999999999999998 79999775
No 467
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=73.19 E-value=2.4 Score=49.60 Aligned_cols=33 Identities=33% Similarity=0.591 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
++|+|||+|..|.++|+.|+..|+ +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999987 899999755
No 468
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=73.10 E-value=3 Score=47.66 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
..++|+|+|+|-+|.++|+.|++.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 46899999999999999999999996 899998753
No 469
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=72.93 E-value=2.3 Score=47.65 Aligned_cols=34 Identities=35% Similarity=0.568 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCc-EEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFS-VTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~-v~vlE~~~ 894 (1624)
.++|.|||+|..|...|..|++.|++ |.++++..
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35899999999999999999999999 89998753
No 470
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=72.88 E-value=2.4 Score=49.71 Aligned_cols=35 Identities=26% Similarity=0.260 Sum_probs=30.9
Q ss_pred CCCCcEEEECCC-HHHHHHHHHHHHCCCcEEEEccc
Q 046008 859 DVKKRIIVIGAG-PAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 859 ~~~~~v~IiGaG-~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
-..++|+|||+| +.|..+|..|...|.+|+|+++.
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 467899999999 67999999999999999988653
No 471
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=72.80 E-value=3.4 Score=47.22 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---cEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF---SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~---~v~vlE~~~ 894 (1624)
.++|.|||+|.-|.+.|..|.+.|+ +|+++++..
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4689999999999999999999999 899998754
No 472
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=72.68 E-value=3.2 Score=46.98 Aligned_cols=36 Identities=39% Similarity=0.487 Sum_probs=32.0
Q ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 860 VKKRIIVIGA-GPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 860 ~~~~v~IiGa-G~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
.+++|+|.|| |..|...+..|.+.|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4678999998 99999999999999999999987654
No 473
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=72.68 E-value=2.3 Score=48.76 Aligned_cols=34 Identities=24% Similarity=0.372 Sum_probs=30.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|+|+|||-.|.++|+.|++.| +|+|+.|..
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 3578999999999999999999999 999998753
No 474
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=72.63 E-value=2.9 Score=48.71 Aligned_cols=35 Identities=31% Similarity=0.515 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
...+|+|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 35789999999999999999999885 799999764
No 475
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=72.09 E-value=2.7 Score=45.37 Aligned_cols=35 Identities=31% Similarity=0.483 Sum_probs=31.3
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 861 KKRIIVIGA-GPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGa-G~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
+++|+|+|| |..|...+..|.++|++|+++.|...
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 478999995 99999999999999999999998643
No 476
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=71.98 E-value=3.2 Score=49.56 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=32.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
...++|+|+|+|-.|..+|..|.+.|++|++.+..
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45789999999999999999999999999999864
No 477
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=71.59 E-value=2.9 Score=48.16 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
..++|+|||+|-+|.++|+.|++.|. +|+|+-|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 46899999999999999999999998 899998754
No 478
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=71.51 E-value=3.1 Score=47.86 Aligned_cols=35 Identities=31% Similarity=0.289 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
..++|+|||+|-+|.++|+.|++.|. +|+|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 46889999999999999999999996 899998753
No 479
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=71.30 E-value=3.4 Score=46.78 Aligned_cols=32 Identities=25% Similarity=0.376 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHCCC-cEEEEcccc
Q 046008 863 RIIVIGAGPAGLTAARHLQRQGF-SVTVLEARN 894 (1624)
Q Consensus 863 ~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~~ 894 (1624)
+|+|||+|-+|-++|+.|.+.|. +|+|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 899998764
No 480
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=71.18 E-value=3.5 Score=46.43 Aligned_cols=32 Identities=34% Similarity=0.454 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 863 RIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 863 ~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
+|+|||+|-.|.+.|+.|.+.|++|+++++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999999864
No 481
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=71.06 E-value=3.6 Score=48.30 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=33.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
...++|.|||.|-.|...|..|+..|++|+++++...
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 4567899999999999999999999999999997653
No 482
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=70.89 E-value=3.4 Score=48.91 Aligned_cols=34 Identities=15% Similarity=0.337 Sum_probs=30.2
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCC--cEEEEcccc
Q 046008 861 KKRIIVIGA-GPAGLTAARHLQRQGF--SVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGa-G~aGl~aA~~L~~~g~--~v~vlE~~~ 894 (1624)
.++|+|||| |-.|.++|+.|+..|. +|+++|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 578999997 9999999999999994 899999743
No 483
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=70.59 E-value=3.6 Score=46.91 Aligned_cols=34 Identities=26% Similarity=0.503 Sum_probs=31.0
Q ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCcEEEEccc
Q 046008 860 VKKRIIVIG-AGPAGLTAARHLQRQGFSVTVLEAR 893 (1624)
Q Consensus 860 ~~~~v~IiG-aG~aGl~aA~~L~~~g~~v~vlE~~ 893 (1624)
..++|+|+| +|-.|.++|+.|++.|++|+|+.|.
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 357899999 8999999999999999999999875
No 484
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=70.37 E-value=3.2 Score=47.13 Aligned_cols=34 Identities=12% Similarity=0.199 Sum_probs=27.0
Q ss_pred CCcEEEECCC-HHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAG-PAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG-~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++++||||| .+|+.+|..+.+.|.+|+|+++.+
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred CCceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 3567777776 567899999999999999997643
No 485
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=70.37 E-value=0.46 Score=56.26 Aligned_cols=55 Identities=9% Similarity=0.042 Sum_probs=46.3
Q ss_pred hhhhhhhhhhccccCCCccccccccccccc---cCCCCccccccCCCcC-Chhcccccc
Q 046008 784 RQKESVVDDCQQRVDSDPKASNRLVGVDVS---CDDPSCGMVDGGTVPL-TIEERSESE 838 (1624)
Q Consensus 784 ~~~~~~~~~~~~~v~v~~~~~~~~~~~d~~---~~~~~c~~v~~~r~~l-~p~~~~~~~ 838 (1624)
++....+..+++.+++|+|+++++..++.+ +++|.||+|.++|++| +|.+...+.
T Consensus 263 ~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 263 GYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp TTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred ceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 345567788999999999999999887765 8889999999999999 999965544
No 486
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=70.33 E-value=2.9 Score=48.40 Aligned_cols=34 Identities=29% Similarity=0.505 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
+++|.+||-|.-|...|..|.++||+|++|++..
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5789999999999999999999999999999754
No 487
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=70.31 E-value=4.2 Score=48.29 Aligned_cols=36 Identities=28% Similarity=0.406 Sum_probs=32.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...++|+|||+|..|..+|..+.+.|++|++++...
T Consensus 12 ~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 12 LPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 356799999999999999999999999999998643
No 488
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=69.99 E-value=3.4 Score=47.59 Aligned_cols=38 Identities=26% Similarity=0.349 Sum_probs=30.5
Q ss_pred CCCCCcEEEECC-CHHHHHHHHHHHHCCCcEEEEccccc
Q 046008 858 IDVKKRIIVIGA-GPAGLTAARHLQRQGFSVTVLEARNR 895 (1624)
Q Consensus 858 ~~~~~~v~IiGa-G~aGl~aA~~L~~~g~~v~vlE~~~~ 895 (1624)
....++|+|.|| |..|...+..|.+.|++|+++.+...
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 345788999998 99999999999999999999987653
No 489
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=69.87 E-value=3.5 Score=50.25 Aligned_cols=35 Identities=31% Similarity=0.304 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
..++|+|||.|..|..+|..|...|.+|+++|..+
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 47899999999999999999999999999999854
No 490
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=69.84 E-value=3.2 Score=51.08 Aligned_cols=33 Identities=18% Similarity=0.382 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.+|.|||+|.-|...|..|+++|++|+++++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 689999999999999999999999999999754
No 491
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=69.40 E-value=3.9 Score=47.76 Aligned_cols=34 Identities=18% Similarity=0.416 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEAR 893 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~ 893 (1624)
..++|+|+|+|-+|.++|+.|++.|. +|+|+-|.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 46899999999999999999999998 79999775
No 492
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=68.71 E-value=4.3 Score=44.34 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=29.5
Q ss_pred CcEEEECC-CHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 862 KRIIVIGA-GPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 862 ~~v~IiGa-G~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
++|+|.|| |-.|...|..|+++|++|+++.+..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 57999997 8999999999999999999998754
No 493
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=68.71 E-value=3.7 Score=46.65 Aligned_cols=34 Identities=24% Similarity=0.435 Sum_probs=29.0
Q ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 861 KKRIIVIGA-GPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 861 ~~~v~IiGa-G~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
.++|+|.|| |..|...+..|.++|++|+++.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRR 36 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCC
Confidence 468999997 9999999999999999999998643
No 494
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=68.61 E-value=3.4 Score=46.85 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=29.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCcEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQ--GFSVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~--g~~v~vlE~~ 893 (1624)
.++|.|||+|..|.+.|..|++. |++|+++++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 36899999999999999999998 6789998864
No 495
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=68.47 E-value=4.6 Score=43.52 Aligned_cols=35 Identities=17% Similarity=0.215 Sum_probs=30.2
Q ss_pred CCcEEEECC-CHHHHHHHHHHH-HCCCcEEEEccccc
Q 046008 861 KKRIIVIGA-GPAGLTAARHLQ-RQGFSVTVLEARNR 895 (1624)
Q Consensus 861 ~~~v~IiGa-G~aGl~aA~~L~-~~g~~v~vlE~~~~ 895 (1624)
+++|+|+|| |-.|...|..|+ +.|++|+++.|+..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 355999995 999999999999 89999999987643
No 496
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=68.42 E-value=3.6 Score=48.00 Aligned_cols=33 Identities=21% Similarity=0.471 Sum_probs=29.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--cEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF--SVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~--~v~vlE~~ 893 (1624)
..+|+|||||-.|.++|+.|+..|+ +|.++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999885 89999864
No 497
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=68.27 E-value=3.9 Score=46.71 Aligned_cols=33 Identities=18% Similarity=0.441 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccc
Q 046008 861 KKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEAR 893 (1624)
Q Consensus 861 ~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~ 893 (1624)
.++|+|||+|-+|-++|+.|.+.|. +|+|+-|.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4789999999999999999999997 79999876
No 498
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=68.26 E-value=3.8 Score=46.19 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=30.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEccc
Q 046008 860 VKKRIIVIGAGPAGLTAARHLQRQGF-SVTVLEAR 893 (1624)
Q Consensus 860 ~~~~v~IiGaG~aGl~aA~~L~~~g~-~v~vlE~~ 893 (1624)
...+|+|||+|-.|..+|.+|++.|. +++|++..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 36789999999999999999999997 68999863
No 499
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=67.70 E-value=4.1 Score=49.76 Aligned_cols=36 Identities=31% Similarity=0.327 Sum_probs=32.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
-..++|+|||.|..|..+|..|...|.+|+++|..+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 457899999999999999999999999999998754
No 500
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=67.65 E-value=3.8 Score=48.02 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=32.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccc
Q 046008 859 DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARN 894 (1624)
Q Consensus 859 ~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~ 894 (1624)
...++|.|||.|-.|...|..|+..|++|++++++.
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 456789999999999999999999999999999754
Done!