BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046009
(398 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 360 bits (924), Expect = e-100, Method: Compositional matrix adjust.
Identities = 163/321 (50%), Positives = 226/321 (70%), Gaps = 4/321 (1%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVHD--NGDIASDGYHKY 117
++ FP GF+FG+ ++AYQ EGA EDGR +IWDTF H G + D N D+A D YH++
Sbjct: 13 TRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHTFGKITDFSNADVAVDQYHRF 72
Query: 118 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHH 177
+ED++LMAD G+DAYRFSI+WSR+ PNG G VN G+ +YN LI+ L++ GIQP+VTL+H
Sbjct: 73 EEDIQLMADMGMDAYRFSIAWSRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYH 132
Query: 178 YDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA 237
+DLPQALED+Y GW+++ IV DF AYA CFREFGDRV +W T+NEP+ A+ GYD G+
Sbjct: 133 WDLPQALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQ 192
Query: 238 PPKRCSPPFK-NCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYG 296
P RCS C+ GNS TEPY+ HH +LAHA+ A +YR Y+ Q+G +G++
Sbjct: 193 APGRCSVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMW 252
Query: 297 LLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGS 356
P++N+T D A +R +F +GW A+P +GDYP M+ VG RLP FT E+ VKG+
Sbjct: 253 FEPMSNTTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRARVGERLPRFTADEAAVVKGA 312
Query: 357 ADFLGVNNYNSGYIKDNPSSL 377
DF+G+N+Y + Y + N +++
Sbjct: 313 LDFVGINHYTTYYTRHNNTNI 333
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 340 bits (873), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 170/330 (51%), Positives = 218/330 (66%), Gaps = 7/330 (2%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNV--HDNGDIASDGYHKY 117
S+ FP F+FG+ TSAYQVEG A GR PSIWD F H GNV + NGD+A+D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 118 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHH 177
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYN+LIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 178 YDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA 237
YDLP ALE +YGGW+N + FT YA+ CF+ FG+RV +W T NEP ALLGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
PPKRC+ K GNS+TEPY+ H+ LL+HA+ YR YQ Q G +G+ +
Sbjct: 196 PPKRCT---KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWY 252
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSA 357
L+NSTED A QR DF +GW +PL+ G YP IM+ V RLP FT +++ VKGSA
Sbjct: 253 EALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSA 312
Query: 358 DFLGVNNYNSGYIKDNPSSLKQELRDWNAD 387
D++G+N Y + Y+K ++Q ++AD
Sbjct: 313 DYIGINQYTASYMKGQ-QLMQQTPTSYSAD 341
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 340 bits (873), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 170/330 (51%), Positives = 218/330 (66%), Gaps = 7/330 (2%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNV--HDNGDIASDGYHKY 117
S+ FP F+FG+ TSAYQVEG A GR PSIWD F H GNV + NGD+A+D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 118 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHH 177
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYN+LIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 178 YDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA 237
YDLP ALE +YGGW+N + FT YA+ CF+ FG+RV +W T NEP ALLGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
PPKRC+ K GNS+TEPY+ H+ LL+HA+ YR YQ Q G +G+ +
Sbjct: 196 PPKRCT---KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWY 252
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSA 357
L+NSTED A QR DF +GW +PL+ G YP IM+ V RLP FT +++ VKGSA
Sbjct: 253 EALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSA 312
Query: 358 DFLGVNNYNSGYIKDNPSSLKQELRDWNAD 387
D++G+N Y + Y+K ++Q ++AD
Sbjct: 313 DYIGINQYTASYMKGQ-QLMQQTPTSYSAD 341
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 340 bits (872), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 170/330 (51%), Positives = 218/330 (66%), Gaps = 7/330 (2%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNV--HDNGDIASDGYHKY 117
S+ FP F+FG+ TSAYQVEG A GR PSIWD F H GNV + NGD+A+D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 118 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHH 177
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYN+LIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 178 YDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA 237
YDLP ALE +YGGW+N + FT YA+ CF+ FG+RV +W T NEP ALLGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
PPKRC+ K GNS+TEPY+ H+ LL+HA+ YR YQ Q G +G+ +
Sbjct: 196 PPKRCT---KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWY 252
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSA 357
L+NSTED A QR DF +GW +PL+ G YP IM+ V RLP FT +++ VKGSA
Sbjct: 253 EALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSA 312
Query: 358 DFLGVNNYNSGYIKDNPSSLKQELRDWNAD 387
D++G+N Y + Y+K ++Q ++AD
Sbjct: 313 DYIGINQYTASYMKGQ-QLMQQTPTSYSAD 341
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 340 bits (872), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 170/330 (51%), Positives = 218/330 (66%), Gaps = 7/330 (2%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNV--HDNGDIASDGYHKY 117
S+ FP F+FG+ TSAYQVEG A GR PSIWD F H GNV + NGD+A+D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 118 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHH 177
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYN+LIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 178 YDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA 237
YDLP ALE +YGGW+N + FT YA+ CF+ FG+RV +W T NEP ALLGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
PPKRC+ K GNS+TEPY+ H+ LL+HA+ YR YQ Q G +G+ +
Sbjct: 196 PPKRCT---KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWY 252
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSA 357
L+NSTED A QR DF +GW +PL+ G YP IM+ V RLP FT +++ VKGSA
Sbjct: 253 EALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSA 312
Query: 358 DFLGVNNYNSGYIKDNPSSLKQELRDWNAD 387
D++G+N Y + Y+K ++Q ++AD
Sbjct: 313 DYIGINQYTASYMKGQ-QLMQQTPTSYSAD 341
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 340 bits (872), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 167/314 (53%), Positives = 211/314 (67%), Gaps = 6/314 (1%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNV--HDNGDIASDGYHKY 117
S+ FP F+FG+ TSAYQVEG A GR PSIWD F H GNV + NGD+A+D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 118 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHH 177
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYN+LIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 178 YDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA 237
YDLP ALE +YGGW+N + FT YA+ CF+ FG+RV +W T NEP ALLGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
PPKRC+ K GNS+TEPY+ H+ LL+HA+ YR YQ Q G +G+ +
Sbjct: 196 PPKRCT---KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWY 252
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSA 357
L+NSTED A QR DF +GW +PL+ G YP IM+ V RLP FT +++ VKGSA
Sbjct: 253 EALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSA 312
Query: 358 DFLGVNNYNSGYIK 371
D++G+N Y + Y+K
Sbjct: 313 DYIGINQYTASYMK 326
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 340 bits (872), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 170/330 (51%), Positives = 218/330 (66%), Gaps = 7/330 (2%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNV--HDNGDIASDGYHKY 117
S+ FP F+FG+ TSAYQVEG A GR PSIWD F H GNV + NGD+A+D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 118 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHH 177
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYN+LIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 178 YDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA 237
YDLP ALE +YGGW+N + FT YA+ CF+ FG+RV +W T NEP ALLGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTN 195
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
PPKRC+ K GNS+TEPY+ H+ LL+HA+ YR YQ Q G +G+ +
Sbjct: 196 PPKRCT---KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWY 252
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSA 357
L+NSTED A QR DF +GW +PL+ G YP IM+ V RLP FT +++ VKGSA
Sbjct: 253 EALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSA 312
Query: 358 DFLGVNNYNSGYIKDNPSSLKQELRDWNAD 387
D++G+N Y + Y+K ++Q ++AD
Sbjct: 313 DYIGINQYTASYMKGQ-QLMQQTPTSYSAD 341
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 339 bits (870), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/323 (53%), Positives = 223/323 (69%), Gaps = 7/323 (2%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--GNVHD--NGDIASDGYHK 116
S+R FP GFIFG+ +S+YQ EG A E GR PSIWDTFTH + D NGD+ASD YH
Sbjct: 30 SRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYHL 89
Query: 117 YKEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNSLINELISHGIQPHVT 174
YKEDV+LM D G+DAYRFSISW+R++PNG RG VN +G++YYN+LINEL+S G+QP +T
Sbjct: 90 YKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFIT 149
Query: 175 LHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDI 234
L H+D PQALED+Y G+++ I+ DF YA +CF+EFGDRV W T NEP F GY
Sbjct: 150 LFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYAT 209
Query: 235 GIAPPKRCSPPFK-NCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIF 293
G+ P RCSP K NC G+S EPY A HH LLAHA RLY+ YQ Q G IG+++
Sbjct: 210 GLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLV 269
Query: 294 TYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQV 353
++ +P + S + A +R DF+ GW +PL+ GDYP M+ VG+RLP FT +SK V
Sbjct: 270 SHWFVPFSRSKSNNDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLV 329
Query: 354 KGSADFLGVNNYNSGYIKDNPSS 376
KG+ DF+G+N Y + Y + P S
Sbjct: 330 KGAFDFIGLNYYTANYADNLPPS 352
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/330 (51%), Positives = 218/330 (66%), Gaps = 7/330 (2%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNV--HDNGDIASDGYHKY 117
S+ FP F+FG+ TSAYQVEG A GR PSIWD F H GNV + NGD+A+D YH+Y
Sbjct: 16 SRAAFPKRFVFGTVTSAYQVEGMAASGGRGPSIWDAFAHTPGNVAGNQNGDVATDQYHRY 75
Query: 118 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHH 177
KEDV LM DAYRFSISWSR+ P+G G VN +G+ YYN+LIN L+ GI P+V L+H
Sbjct: 76 KEDVNLMKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYH 135
Query: 178 YDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA 237
YDLP ALE +YGGW+N + FT YA+ CF+ FG+RV +W T N+P ALLGYD G
Sbjct: 136 YDLPLALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQPRIVALLGYDQGTN 195
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
PPKRC+ K GNS+TEPY+ H+ LL+HA+ YR YQ Q G +G+ +
Sbjct: 196 PPKRCT---KCAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWY 252
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSA 357
L+NSTED A QR DF +GW +PL+ G YP IM+ V RLP FT +++ VKGSA
Sbjct: 253 EALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSA 312
Query: 358 DFLGVNNYNSGYIKDNPSSLKQELRDWNAD 387
D++G+N Y + Y+K ++Q ++AD
Sbjct: 313 DYIGINQYTASYMKGQ-QLMQQTPTSYSAD 341
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 313 bits (803), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 163/317 (51%), Positives = 218/317 (68%), Gaps = 7/317 (2%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--GNVHD--NGDIASDGYHKYKED 120
F PGF+FG+ +SA+Q EGAA EDG+ PSIWDTFTH + D NGD+A D YH+YKED
Sbjct: 19 FAPGFVFGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPEKIKDRTNGDVAIDEYHRYKED 78
Query: 121 VKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNSLINELISHGIQPHVTLHHY 178
+ +M D LDAYRFSISW R++P G+ G VN +G+ YYN+LINE++++G+QP+VTL H+
Sbjct: 79 IGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHW 138
Query: 179 DLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAP 238
D+PQALEDEY G++ + IV DF YA +CF+EFGDRV +W T+NEP ++ Y G
Sbjct: 139 DVPQALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWITLNEPWGVSMNAYAYGTFA 198
Query: 239 PKRCSPPFK-NCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
P RCS K NC G+S EPY+A H+ LLAHA+ ARLY+ YQ Q+G IG+++ ++
Sbjct: 199 PGRCSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHWF 258
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSA 357
P + D A +R DF++GW +PL G YP M+ V RLP F+ ESK++ GS
Sbjct: 259 EPASKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMRYLVRKRLPKFSTEESKELTGSF 318
Query: 358 DFLGVNNYNSGYIKDNP 374
DFLG+N Y+S Y P
Sbjct: 319 DFLGLNYYSSYYAAKAP 335
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 312 bits (800), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/338 (46%), Positives = 217/338 (64%), Gaps = 10/338 (2%)
Query: 62 KRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH--AGNVHD--NGDIASDGYHKY 117
+RDFP FIFG+G SAYQ EGA NE R PSIWDTFT + D NG+ A + YH Y
Sbjct: 40 RRDFPQDFIFGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPAKISDGSNGNQAINCYHMY 99
Query: 118 KEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNSLINELISHGIQPHVTL 175
KED+K+M TGL++YRFSISWSR++P GR VN G+++Y+ I+EL+++GI+P VTL
Sbjct: 100 KEDIKIMKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTL 159
Query: 176 HHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIG 235
H+DLPQALEDEYGG+++ IV DF YA CF EFGD++ YWTT NEP+ FA+ GY +G
Sbjct: 160 FHWDLPQALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALG 219
Query: 236 IAPPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTY 295
P R +G+ + EPY+ H++LLAH + YR +Q Q G IG+ + +
Sbjct: 220 EFAPGRGG----KGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSM 275
Query: 296 GLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKG 355
+ PL++ D A +R DF++GW PL GDYP M++ V RLP F+ +S+++KG
Sbjct: 276 WMEPLSDVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMRELVKGRLPKFSADDSEKLKG 335
Query: 356 SADFLGVNNYNSGYIKDNPSSLKQELRDWNADTAAEIF 393
DF+G+N Y + Y+ + S ++L D + F
Sbjct: 336 CYDFIGMNYYTATYVTNAVKSNSEKLSYETDDQVTKTF 373
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 308 bits (789), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/337 (50%), Positives = 216/337 (64%), Gaps = 25/337 (7%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAG----NVHDNGDIASDGYHK 116
S+ DFP FI G+G+SAYQ+EG A + GR PSIWDTFTH NGD+A D YH
Sbjct: 18 SRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYHL 77
Query: 117 YKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNSLINELISHGIQPHVT 174
YKEDV ++ + GLDAYRFSISWSR++P GR G VN +G+ YYN+LI+ L+++GI+P VT
Sbjct: 78 YKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVT 137
Query: 175 LHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDI 234
L H+D+PQALEDEYGG+++ IV DF YA +CF EFGDRV +W T+NEP F++ GY
Sbjct: 138 LFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYAT 197
Query: 235 GIAPP----------------KRCS--PPFKNCRKGNSSTEPYMAVHHVLLAHASVARLY 276
G+ P RCS P C GN TEPY HH+LLAHA+ LY
Sbjct: 198 GLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELY 257
Query: 277 RKNYQDKQHGYIGMSIFTYGLLPL-TNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMK 335
+ +Q Q G IG+S T + P NS D A R DF++GW P+ GDYP MK
Sbjct: 258 KNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMK 317
Query: 336 KNVGSRLPLFTYLESKQVKGSADFLGVNNYNSGYIKD 372
K VGSRLP F+ +SK +KGS DF+G+N Y + Y+ +
Sbjct: 318 KFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTN 354
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 307 bits (787), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 169/337 (50%), Positives = 216/337 (64%), Gaps = 25/337 (7%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAG----NVHDNGDIASDGYHK 116
S+ DFP FI G+G+SAYQ+EG A + GR PSIWDTFTH NGD+A D YH
Sbjct: 18 SRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYHL 77
Query: 117 YKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNSLINELISHGIQPHVT 174
YKEDV ++ + GLDAYRFSISWSR++P GR G VN +G+ YYN+LI+ L+++GI+P VT
Sbjct: 78 YKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVT 137
Query: 175 LHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDI 234
L H+D+PQALEDEYGG+++ IV DF YA +CF EFGDRV +W T+NEP F++ GY
Sbjct: 138 LFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYAT 197
Query: 235 GIAPP----------------KRCS--PPFKNCRKGNSSTEPYMAVHHVLLAHASVARLY 276
G+ P RCS P C GN TEPY HH+LLAHA+ LY
Sbjct: 198 GLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELY 257
Query: 277 RKNYQDKQHGYIGMSIFTYGLLPL-TNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMK 335
+ +Q Q G IG+S T + P NS D A R DF++GW P+ GDYP MK
Sbjct: 258 KNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMK 317
Query: 336 KNVGSRLPLFTYLESKQVKGSADFLGVNNYNSGYIKD 372
K VGSRLP F+ +SK +KGS DF+G+N Y + Y+ +
Sbjct: 318 KFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTN 354
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 306 bits (784), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/317 (48%), Positives = 204/317 (64%), Gaps = 8/317 (2%)
Query: 62 KRD-FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--GNVHD--NGDIASDGYHK 116
KRD F F+FG+ TSAYQ+EGA NEDG+ PS WD F H + D NGD+A++ YH
Sbjct: 70 KRDWFSKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDGTNGDVAANSYHM 129
Query: 117 YKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLH 176
Y+EDVK + D G+ YRFSISWSR++PNG G N KG+ YYN+LIN LI HGI P+VT+
Sbjct: 130 YEEDVKALKDMGMKVYRFSISWSRILPNGTGKPNQKGIDYYNNLINSLIRHGIVPYVTIW 189
Query: 177 HYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGI 236
H+D PQALED+YGG++++ IV D+ +A +CF+ FGDRV W T NEP+ + Y GI
Sbjct: 190 HWDTPQALEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKNWFTFNEPHTYCCFSYGEGI 249
Query: 237 APPKRCSPPFKNCR--KGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFT 294
P RCSP +C +G+S EPY A HH+LLAHA L++ +Y IGM+
Sbjct: 250 HAPGRCSPGL-DCAVPEGDSLREPYTAGHHILLAHAEAVELFKAHYNKHGDSKIGMAFDV 308
Query: 295 YGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVK 354
G P +S D A +R D+ +GW P+V GDYP M+ +G RLP+FT E +++
Sbjct: 309 MGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLA 368
Query: 355 GSADFLGVNNYNSGYIK 371
S D +G+N Y S + K
Sbjct: 369 SSCDIMGLNYYTSRFSK 385
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 306 bits (783), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/337 (49%), Positives = 216/337 (64%), Gaps = 25/337 (7%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAG----NVHDNGDIASDGYHK 116
S+ DFP FI G+G+SAYQ+EG A + GR PSIWDTFTH NGD+A D YH
Sbjct: 18 SRSDFPADFIMGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPDMIRGGTNGDVAVDSYHL 77
Query: 117 YKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNSLINELISHGIQPHVT 174
YKEDV ++ + GLDAYRFSISWSR++P GR G VN +G+ YYN+LI+ L+++GI+P VT
Sbjct: 78 YKEDVNILKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVT 137
Query: 175 LHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDI 234
L H+D+PQALEDEYGG+++ IV DF YA +CF EFGDRV +W T+N+P F++ GY
Sbjct: 138 LFHWDVPQALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVHGYAT 197
Query: 235 GIAPP----------------KRCS--PPFKNCRKGNSSTEPYMAVHHVLLAHASVARLY 276
G+ P RCS P C GN TEPY HH+LLAHA+ LY
Sbjct: 198 GLYAPGRGRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELY 257
Query: 277 RKNYQDKQHGYIGMSIFTYGLLPL-TNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMK 335
+ +Q Q G IG+S T + P NS D A R DF++GW P+ GDYP MK
Sbjct: 258 KNKFQRGQEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMK 317
Query: 336 KNVGSRLPLFTYLESKQVKGSADFLGVNNYNSGYIKD 372
K VGSRLP F+ +SK +KGS DF+G+N Y + Y+ +
Sbjct: 318 KFVGSRLPKFSPEQSKMLKGSYDFVGLNYYTASYVTN 354
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 302 bits (773), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/317 (47%), Positives = 202/317 (63%), Gaps = 8/317 (2%)
Query: 62 KRD-FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--GNVHD--NGDIASDGYHK 116
KRD F F+FG+ TSAYQ+EGA NEDG+ PS WD F H + D NGD+A++ YH
Sbjct: 70 KRDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHL 129
Query: 117 YKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLH 176
Y+EDVK + D G+ YRFSISWSR++P+G G VN G+ YYN LIN LI + I P+VT+
Sbjct: 130 YEEDVKALKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIW 189
Query: 177 HYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGI 236
H+D PQALED+YGG++N+ IV D+ +A VCF+ FGDRV W T NEP+ + Y GI
Sbjct: 190 HWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEGI 249
Query: 237 APPKRCSPPFKNCR--KGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFT 294
P RCSP +C +G+S EPY A HH+LLAHA +L++ Y IGM+
Sbjct: 250 HAPGRCSPGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDV 308
Query: 295 YGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVK 354
G P +S D A +R D+ +GW P+V GDYP M+ +G RLP+FT E +++
Sbjct: 309 MGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLA 368
Query: 355 GSADFLGVNNYNSGYIK 371
S D +G+N Y S + K
Sbjct: 369 SSCDIMGLNYYTSRFSK 385
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 300 bits (767), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/317 (47%), Positives = 201/317 (63%), Gaps = 8/317 (2%)
Query: 62 KRD-FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--GNVHD--NGDIASDGYHK 116
KRD F F+FG+ TSAYQ+EGA NEDG+ PS WD F H + D NGD+A++ YH
Sbjct: 70 KRDWFDKDFLFGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPERISDMTNGDVAANSYHL 129
Query: 117 YKEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLH 176
Y+EDVK + D G+ YRFSISWSR++P+G G VN G+ YYN LIN LI + I P+VT+
Sbjct: 130 YEEDVKALKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIW 189
Query: 177 HYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGI 236
H+D PQALED+YGG++N+ IV D+ +A VCF+ FGDRV W T N P+ + Y GI
Sbjct: 190 HWDTPQALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNAPHTYCCFSYGEGI 249
Query: 237 APPKRCSPPFKNCR--KGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFT 294
P RCSP +C +G+S EPY A HH+LLAHA +L++ Y IGM+
Sbjct: 250 HAPGRCSPGM-DCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDV 308
Query: 295 YGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVK 354
G P +S D A +R D+ +GW P+V GDYP M+ +G RLP+FT E +++
Sbjct: 309 MGYEPYQDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLA 368
Query: 355 GSADFLGVNNYNSGYIK 371
S D +G+N Y S + K
Sbjct: 369 SSCDIMGLNYYTSRFSK 385
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 294 bits (753), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 146/321 (45%), Positives = 210/321 (65%), Gaps = 17/321 (5%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVHD--NGDIASDGYHKY 117
S P F++G T+AYQ+EG+ ++DGR PSIWDTF A G + D +GD+A+D Y+++
Sbjct: 5 SAAKLPKSFVWGYATAAYQIEGSPDKDGREPSIWDTFCKAPGKIADGSSGDVATDSYNRW 64
Query: 118 KEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNSLINELISHGIQPHVTL 175
+EDV+L+ G+ AYRFS+SWSR+IP G PVN G+++Y +LI EL+ GI P VTL
Sbjct: 65 REDVQLLKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTL 124
Query: 176 HHYDLPQALEDEYGGWIN-QTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDI 234
+H+DLPQAL+D YGGW+N + +QDFT YA +CF FGD V W T NEP +++GY
Sbjct: 125 YHWDLPQALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGYGN 184
Query: 235 GIAPPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFT 294
GI P S +TEP++ HH++LAHA +LYR +++KQ G IG+++ +
Sbjct: 185 GIFAPGHVS-----------NTEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDS 233
Query: 295 YGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVK 354
+ L+P ++ AT R +F +G ANP+ G+YP +KK +G RLP FT E + VK
Sbjct: 234 HWLIPYDDTDASKEATLRAMEFKLGRFANPIYKGEYPPRIKKILGDRLPEFTPEEIELVK 293
Query: 355 GSADFLGVNNYNSGYIKDNPS 375
GS+DF G+N Y + ++D S
Sbjct: 294 GSSDFFGLNTYTTHLVQDGGS 314
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 293 bits (750), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/322 (45%), Positives = 205/322 (63%), Gaps = 11/322 (3%)
Query: 59 EYSKRD-FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGNV----HDNGDIASDG 113
E +RD FPP F+FG+ TSAYQ+EGA NEDG+ PS WD F H NGD+A+D
Sbjct: 69 EIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADS 128
Query: 114 YHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNSLINELISHGIQP 171
YH Y EDV+L+ + G+DAYRFSISW R++P G G +N K ++YYN LI+ L+ +GI+P
Sbjct: 129 YHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEP 188
Query: 172 HVTLHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLG 231
++T+ H+D PQAL D YGG++++ I++D+T +A VCF +FG +V W T NEP F +
Sbjct: 189 YITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNWLTFNEPETFCSVS 248
Query: 232 YDIGIAPPKRCSPPFKNCR--KGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIG 289
Y G+ P RCSP +C GNS +EPY+ H++L AHA +Y K Y G IG
Sbjct: 249 YGTGVLAPGRCSPGV-SCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNK-YHKGADGRIG 306
Query: 290 MSIFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLE 349
+++ +G +P TN+ D A +R D +GW P+V GDYP M+ + R+P F E
Sbjct: 307 LALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKE 366
Query: 350 SKQVKGSADFLGVNNYNSGYIK 371
+++ GS D +G+N Y S + K
Sbjct: 367 QEKLVGSYDMIGINYYTSTFSK 388
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 291 bits (746), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/322 (45%), Positives = 204/322 (63%), Gaps = 11/322 (3%)
Query: 59 EYSKRD-FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGNV----HDNGDIASDG 113
E +RD FPP F+FG+ TSAYQ+EGA NEDG+ PS WD F H NGD+A+D
Sbjct: 69 EIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADS 128
Query: 114 YHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNSLINELISHGIQP 171
YH Y EDV+L+ + G+DAYRFSISW R++P G G +N K ++YYN LI+ L+ +GI+P
Sbjct: 129 YHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEP 188
Query: 172 HVTLHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLG 231
++T+ H+D PQAL D YGG++++ I++D+T +A VCF +FG V W T NEP F +
Sbjct: 189 YITIFHWDTPQALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNEPETFCSVS 248
Query: 232 YDIGIAPPKRCSPPFKNCR--KGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIG 289
Y G+ P RCSP +C GNS +EPY+ H++L AHA +Y K Y G IG
Sbjct: 249 YGTGVLAPGRCSPGV-SCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNK-YHKGADGRIG 306
Query: 290 MSIFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLE 349
+++ +G +P TN+ D A +R D +GW P+V GDYP M+ + R+P F E
Sbjct: 307 LALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKE 366
Query: 350 SKQVKGSADFLGVNNYNSGYIK 371
+++ GS D +G+N Y S + K
Sbjct: 367 QEKLVGSYDMIGINYYTSTFSK 388
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 291 bits (746), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/322 (44%), Positives = 205/322 (63%), Gaps = 11/322 (3%)
Query: 59 EYSKRD-FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGNV----HDNGDIASDG 113
E +RD FPP F+FG+ TSAYQ+EGA NEDG+ PS WD F H NGD+A+D
Sbjct: 69 EIPRRDWFPPSFLFGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPEWIVDRSNGDVAADS 128
Query: 114 YHKYKEDVKLMADTGLDAYRFSISWSRLIPNGR--GPVNPKGLQYYNSLINELISHGIQP 171
YH Y EDV+L+ + G+DAYRFSISW R++P G G +N KG++YYN LI+ L+ +GI+P
Sbjct: 129 YHMYAEDVRLLKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLENGIEP 188
Query: 172 HVTLHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLG 231
++T+ H+D PQAL + YGG++++ I++D+T +A VCF +FG V W T N+P F +
Sbjct: 189 YITIFHWDTPQALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNDPETFCSVS 248
Query: 232 YDIGIAPPKRCSPPFKNCR--KGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIG 289
Y G+ P RCSP +C GNS +EPY+ H++L AHA +Y K Y G IG
Sbjct: 249 YGTGVLAPGRCSPGV-SCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNK-YHKGADGRIG 306
Query: 290 MSIFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLE 349
+++ +G +P TN+ D A +R D +GW P+V GDYP M+ + R+P F E
Sbjct: 307 LALNVFGRVPYTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKE 366
Query: 350 SKQVKGSADFLGVNNYNSGYIK 371
+++ GS D +G+N Y S + K
Sbjct: 367 QEKLVGSYDMIGINYYTSTFSK 388
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 282 bits (721), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 203/344 (59%), Gaps = 13/344 (3%)
Query: 58 DEYSKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH-----AGNVHDNGDIASD 112
D + F FIFG +SAYQ+EG GR +IWD FTH +G H NGD D
Sbjct: 18 DGLNSSSFEADFIFGVASSAYQIEGTI---GRGLNIWDGFTHRYPDKSGPDHGNGDTTCD 74
Query: 113 GYHKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGP--VNPKGLQYYNSLINELISHGIQ 170
+ +++D+ ++ + YRFSI+WSR+IP G+ VN KG+ YY+ LI+ LI GI
Sbjct: 75 SFSYWQKDIDVLDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGLIDGLIKKGIT 134
Query: 171 PHVTLHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALL 230
P VTL H+DLPQ L+DEY G+++ I+ DF YA++CF EFGD V YW T+N+ +
Sbjct: 135 PFVTLFHWDLPQTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTR 194
Query: 231 GYDIGIAPPKRCSPPFK-NCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIG 289
GY + P RCSP +C GNSSTEPY+ HH LLAHA V LYRKNY Q G IG
Sbjct: 195 GYGSALDAPGRCSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIG 253
Query: 290 MSIFTYGLLPLTNSTEDAI-ATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYL 348
++ T LP ++ +I AT+R F +GW PL G YP IM VG+RLP F+
Sbjct: 254 PTMITRWFLPYNDTDRHSIAATERMKQFFLGWFMGPLTNGTYPQIMIDTVGARLPTFSPE 313
Query: 349 ESKQVKGSADFLGVNNYNSGYIKDNPSSLKQELRDWNADTAAEI 392
E+ VKGS DFLG+N Y + Y + +P+ + D A++
Sbjct: 314 ETNLVKGSYDFLGLNYYFTQYAQPSPNPVNATNHTAMMDAGAKL 357
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 147/326 (45%), Positives = 204/326 (62%), Gaps = 14/326 (4%)
Query: 59 EYSKRD-FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH--AGNVHD--NGDIASDG 113
E +RD FP F FG+ TSAYQ+EGA NEDG+ S WD F H + D N DI ++
Sbjct: 17 EIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANS 76
Query: 114 YHKYKEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNSLINELISHGIQP 171
YH YK DV+L+ + G+DAYRFSISW R++P G G +NP G++YY +LIN L+ +GI+P
Sbjct: 77 YHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEP 136
Query: 172 HVTLHHYDLPQALEDEYGGWIN---QTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFA 228
+VT+ H+D+PQALE++YGG+++ ++IV+D+T +A VCF FGD+V W T NEP F
Sbjct: 137 YVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFT 196
Query: 229 LLGYDIGIAPPKRCSPPFKNCR--KGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHG 286
Y G+ P RCSP +C GNS EPY A H++LLAHA LY K+Y+ +
Sbjct: 197 SFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK-RDDT 254
Query: 287 YIGMSIFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFT 346
IG++ G +P S D A +R D +GW P+V GDYP M+ RLP F
Sbjct: 255 RIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFK 314
Query: 347 YLESKQVKGSADFLGVNNYNSGYIKD 372
+ +++ GS + LG+N Y S + K+
Sbjct: 315 DEQKEKLAGSYNMLGLNYYTSRFSKN 340
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 147/326 (45%), Positives = 204/326 (62%), Gaps = 14/326 (4%)
Query: 59 EYSKRD-FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH--AGNVHD--NGDIASDG 113
E +RD FP F FG+ TSAYQ+EGA NEDG+ S WD F H + D N DI ++
Sbjct: 12 EIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANS 71
Query: 114 YHKYKEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNSLINELISHGIQP 171
YH YK DV+L+ + G+DAYRFSISW R++P G G +NP G++YY +LIN L+ +GI+P
Sbjct: 72 YHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEP 131
Query: 172 HVTLHHYDLPQALEDEYGGWIN---QTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFA 228
+VT+ H+D+PQALE++YGG+++ ++IV+D+T +A VCF FGD+V W T NEP F
Sbjct: 132 YVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFT 191
Query: 229 LLGYDIGIAPPKRCSPPFKNCR--KGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHG 286
Y G+ P RCSP +C GNS EPY A H++LLAHA LY K+Y+ +
Sbjct: 192 SFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK-RDDT 249
Query: 287 YIGMSIFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFT 346
IG++ G +P S D A +R D +GW P+V GDYP M+ RLP F
Sbjct: 250 RIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFK 309
Query: 347 YLESKQVKGSADFLGVNNYNSGYIKD 372
+ +++ GS + LG+N Y S + K+
Sbjct: 310 DEQKEKLAGSYNMLGLNYYTSRFSKN 335
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 277 bits (708), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 205/326 (62%), Gaps = 14/326 (4%)
Query: 59 EYSKRD-FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH--AGNVHD--NGDIASDG 113
E +RD FP F FG+ TSAYQ+EGA NEDG+ S WD F H + D N DI ++
Sbjct: 17 EIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANS 76
Query: 114 YHKYKEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNSLINELISHGIQP 171
YH YK DV+L+ + G+DAYRFSISW R++P G G +NP G++YY +LIN L+ +GI+P
Sbjct: 77 YHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEP 136
Query: 172 HVTLHHYDLPQALEDEYGGWIN---QTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFA 228
+VT+ H+D+PQALE++YGG+++ ++IV+D+T +A VCF FGD+V W T N+P F
Sbjct: 137 YVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFT 196
Query: 229 LLGYDIGIAPPKRCSPPFKNCR--KGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHG 286
+ Y G+ P RCSP +C GNS EPY A H++LLAHA LY K+Y+ +
Sbjct: 197 SVSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK-RDDT 254
Query: 287 YIGMSIFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFT 346
IG++ G +P S D A +R D +GW P+V GDYP M+ RLP F
Sbjct: 255 RIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFK 314
Query: 347 YLESKQVKGSADFLGVNNYNSGYIKD 372
+ +++ GS + LG+N Y S + K+
Sbjct: 315 DEQKEKLAGSYNMLGLNYYTSRFSKN 340
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 204/326 (62%), Gaps = 14/326 (4%)
Query: 59 EYSKRD-FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH--AGNVHD--NGDIASDG 113
E +RD FP F FG+ TSAYQ+EGA NEDG+ S WD F H + D N DI ++
Sbjct: 17 EIPQRDWFPSDFTFGAATSAYQIEGAWNEDGKGESNWDHFCHNHPERILDGSNSDIGANS 76
Query: 114 YHKYKEDVKLMADTGLDAYRFSISWSRLIPNG--RGPVNPKGLQYYNSLINELISHGIQP 171
YH YK DV+L+ + G+DAYRFSISW R++P G G +NP G++YY +LIN L+ +GI+P
Sbjct: 77 YHMYKTDVRLLKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEP 136
Query: 172 HVTLHHYDLPQALEDEYGGWIN---QTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFA 228
+VT+ H+D+PQALE++YGG+++ ++IV+D+T +A VCF FGD+V W T N+P F
Sbjct: 137 YVTIFHWDVPQALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFT 196
Query: 229 LLGYDIGIAPPKRCSPPFKNCR--KGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHG 286
Y G+ P RCSP +C GNS EPY A H++LLAHA LY K+Y+ +
Sbjct: 197 SFSYGTGVFAPGRCSPGL-DCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK-RDDT 254
Query: 287 YIGMSIFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFT 346
IG++ G +P S D A +R D +GW P+V GDYP M+ RLP F
Sbjct: 255 RIGLAFDVMGRVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFK 314
Query: 347 YLESKQVKGSADFLGVNNYNSGYIKD 372
+ +++ GS + LG+N Y S + K+
Sbjct: 315 DEQKEKLAGSYNMLGLNYYTSRFSKN 340
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/330 (44%), Positives = 197/330 (59%), Gaps = 13/330 (3%)
Query: 72 GSGTSAYQVEGAANEDGRAPSIWDTFTH-----AGNVHDNGDIASDGYHKYKEDVKLMAD 126
G +SAYQ+EG GR +IWD FTH +G H NGD D + +++D+ ++ +
Sbjct: 30 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 86
Query: 127 TGLDAYRFSISWSRLIPNGRGP--VNPKGLQYYNSLINELISHGIQPHVTLHHYDLPQAL 184
YRFSI+WSR+IP G+ VN KG+ YY+ LI+ LI GI P VTL H+DLPQ L
Sbjct: 87 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 146
Query: 185 EDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKRCSP 244
+DEY G+++ I+ DF YA++CF EFGD V YW T+N+ + GY + P RCSP
Sbjct: 147 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 206
Query: 245 PFK-NCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNS 303
+C GNSSTEPY+ HH LLAHA V LYRKNY Q G IG ++ T LP ++
Sbjct: 207 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDT 265
Query: 304 TEDAI-ATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSADFLGV 362
+I AT+R +F +GW PL G YP IM VG RLP F+ ES VKGS DFLG+
Sbjct: 266 DRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGL 325
Query: 363 NNYNSGYIKDNPSSLKQELRDWNADTAAEI 392
N Y + Y + +P+ + D A++
Sbjct: 326 NYYFTQYAQPSPNPVNSTNHTAMMDAGAKL 355
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/330 (44%), Positives = 197/330 (59%), Gaps = 13/330 (3%)
Query: 72 GSGTSAYQVEGAANEDGRAPSIWDTFTH-----AGNVHDNGDIASDGYHKYKEDVKLMAD 126
G +SAYQ+EG GR +IWD FTH +G H NGD D + +++D+ ++ +
Sbjct: 32 GVASSAYQIEGTI---GRGLNIWDGFTHRYPNKSGPDHGNGDTTCDSFSYWQKDIDVLDE 88
Query: 127 TGLDAYRFSISWSRLIPNGRGP--VNPKGLQYYNSLINELISHGIQPHVTLHHYDLPQAL 184
YRFSI+WSR+IP G+ VN KG+ YY+ LI+ LI GI P VTL H+DLPQ L
Sbjct: 89 LNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTL 148
Query: 185 EDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKRCSP 244
+DEY G+++ I+ DF YA++CF EFGD V YW T+N+ + GY + P RCSP
Sbjct: 149 QDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGRCSP 208
Query: 245 PFK-NCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNS 303
+C GNSSTEPY+ HH LLAHA V LYRKNY Q G IG ++ T LP ++
Sbjct: 209 TVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYT-HQGGKIGPTMITRWFLPYNDT 267
Query: 304 TEDAI-ATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSADFLGV 362
+I AT+R +F +GW PL G YP IM VG RLP F+ ES VKGS DFLG+
Sbjct: 268 DRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDFLGL 327
Query: 363 NNYNSGYIKDNPSSLKQELRDWNADTAAEI 392
N Y + Y + +P+ + D A++
Sbjct: 328 NYYFTQYAQPSPNPVNSTNHTAMMDAGAKL 357
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 251 bits (640), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 189/324 (58%), Gaps = 28/324 (8%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGN----VHDNGDIASDGYHKYKED 120
FP GF + + T+AYQVEG + DG+ P +WDTFTH G + GD+A Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 121 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
+K + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ +G+ P VTL+H+D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPP 239
LPQ LED+ GGW+++ I++ F YA CF FGDRV W T+NE N +++ YD+G+ PP
Sbjct: 123 LPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPP 181
Query: 240 KRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLP 299
P F T Y A H+++ AHA Y ++ KQ G + +S+F L P
Sbjct: 182 G--IPHF--------GTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEP 231
Query: 300 LT-NSTEDAIATQRYNDFLVGWIANPL-VYGDYPNIMKKNVG----------SRLPLFTY 347
NS D A +R F + A P+ + GDYP ++K + SRLP FT
Sbjct: 232 ADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTE 291
Query: 348 LESKQVKGSADFLGVNNYNSGYIK 371
E K +KG+ADF V Y + IK
Sbjct: 292 EEKKMIKGTADFFAVQYYTTRLIK 315
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 250 bits (639), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 189/324 (58%), Gaps = 28/324 (8%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGN----VHDNGDIASDGYHKYKED 120
FP GF + + T+AYQVEG + DG+ P +WDTFTH G + GD+A Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 121 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
+K + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ +G+ P VTL+H+D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPP 239
LPQ LED+ GGW+++ I++ F YA CF FGDRV W T+NE N +++ YD+G+ PP
Sbjct: 123 LPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPP 181
Query: 240 KRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLP 299
P F T Y A H+++ AHA Y ++ KQ G + +S+F L P
Sbjct: 182 G--IPHF--------GTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEP 231
Query: 300 LT-NSTEDAIATQRYNDFLVGWIANPL-VYGDYPNIMKKNVG----------SRLPLFTY 347
NS D A +R F + A P+ + GDYP ++K + SRLP FT
Sbjct: 232 ADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTE 291
Query: 348 LESKQVKGSADFLGVNNYNSGYIK 371
E K +KG+ADF V Y + IK
Sbjct: 292 EEKKMIKGTADFFAVQYYTTRLIK 315
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 189/324 (58%), Gaps = 28/324 (8%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGN----VHDNGDIASDGYHKYKED 120
FP GF + + T+AYQVEG + DG+ P +WDTFTH G + GD+A Y ++ED
Sbjct: 3 FPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEED 62
Query: 121 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
+K + GL YRFS+SWSRL+P+G G +N KG+ YYN +I++L+ +G+ P VTL+H+D
Sbjct: 63 LKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD 122
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPP 239
LPQ LED+ GGW+++ I++ F YA CF FGDRV W T+N+ N +++ YD+G+ PP
Sbjct: 123 LPQTLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINQANVLSVMSYDLGMFPP 181
Query: 240 KRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLP 299
P F T Y A H+++ AHA Y ++ KQ G + +S+F L P
Sbjct: 182 G--IPHF--------GTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEP 231
Query: 300 LT-NSTEDAIATQRYNDFLVGWIANPL-VYGDYPNIMKKNVG----------SRLPLFTY 347
NS D A +R F + A P+ + GDYP ++K + SRLP FT
Sbjct: 232 ADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTE 291
Query: 348 LESKQVKGSADFLGVNNYNSGYIK 371
E K +KG+ADF V Y + IK
Sbjct: 292 EEKKMIKGTADFFAVQYYTTRLIK 315
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 249 bits (635), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 194/339 (57%), Gaps = 25/339 (7%)
Query: 63 RDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVH--DNGDIASDGYHKYKE 119
+ FP GF++G T++YQ+EG+ DG SIW TF+H GNV D GD+A D Y+++KE
Sbjct: 11 KKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYNRWKE 70
Query: 120 DVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
D++++ G+ AYRFSISW R++P G G VN KGL +YN +I+ L+ GI P VT+ H+D
Sbjct: 71 DIEIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIFHWD 130
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPP 239
LP AL+ + GG +N+ I F Y+ V F FGDRV W T NEP A+ GY G P
Sbjct: 131 LPFALQLK-GGLLNREIADWFAEYSRVLFENFGDRVKNWITFNEPLCSAIPGYGSGTFAP 189
Query: 240 KRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLP 299
R S++EP+ H++L+AH +++R+ +D + G + FTY P
Sbjct: 190 GR-----------QSTSEPWTVGHNILVAHGRAVKVFRETVKDGKIGIVLNGDFTY---P 235
Query: 300 LTNST-EDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSAD 358
+ D A +R +F W A+P+ GDYP M+K +G RLP FT E V GS D
Sbjct: 236 WDAADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSND 295
Query: 359 FLGVNNYNSGYIKDNPSSLKQELRDWNADTAAEIFCMFS 397
F G+N+Y S YI+ S + DT + +F+
Sbjct: 296 FYGMNHYTSNYIRHRSSPASAD------DTVGNVDVLFT 328
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/319 (44%), Positives = 188/319 (58%), Gaps = 28/319 (8%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGN--VHD--NGDIASDGYHKYKED 120
FP F+FG+ T++YQ+EG NEDG+ +IWD H + D NGDIA D YHKYKED
Sbjct: 5 FPKDFMFGTSTASYQIEGGWNEDGKGENIWDRLVHTSPEVIKDGTNGDIACDSYHKYKED 64
Query: 121 VKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
V ++ D L YRFSISW+R+ P+G + PKG+ YYN+LINELI + I P VT++H+D
Sbjct: 65 VAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWD 124
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPP 239
LPQ L+D GGW+N + F YA V F FGDRV +W T NEP A GY I
Sbjct: 125 LPQYLQD-LGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEPIA-VCKGYSI----- 177
Query: 240 KRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLP 299
+ P N + +T Y+A H L+AH RLY + ++ Q+G I +SI +P
Sbjct: 178 -KAYAPNLNLK----TTGHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMP 232
Query: 300 LTNSTEDAIAT-QRYNDFLVGWIANPLVYGDYPNIMKKNVG----------SRLPLFTYL 348
++D I T +R N F GW +P+ GDYP IMKK V S+LP FT
Sbjct: 233 KNAESDDDIETAERANQFERGWFGHPVYKGDYPPIMKKWVDQKSKEEGLPWSKLPKFTKD 292
Query: 349 ESKQVKGSADFLGVNNYNS 367
E K +KG+ADF +N+Y+S
Sbjct: 293 EIKLLKGTADFYALNHYSS 311
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 241 bits (616), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/322 (43%), Positives = 194/322 (60%), Gaps = 32/322 (9%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--GNVHD--NGDIASDGYHKYKED 120
FP F G+ T++YQ+EGA +E+G+ P+IWDT TH V D GDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 121 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
VK++ + G YRFSISW+R++P G VN G+ YYN+LINEL+++GI+P VT++H+D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGY--DIGIA 237
LPQAL+D GGW N + + YA V F+ FGDRV W T NEP F + GY +IG+A
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEPLTF-MDGYASEIGMA 189
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
P +P + Y+A H V+ AHA + LY + ++ +Q G +G+S+
Sbjct: 190 PSIN-TPGIGD----------YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWC 238
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVY--GDYPNIMKKNVG----------SRLPLF 345
P TNS ED + + Y F +G A+P+ GDYP ++K V SRLP F
Sbjct: 239 EPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQF 298
Query: 346 TYLESKQVKGSADFLGVNNYNS 367
T E + ++G+ DFLG+N Y +
Sbjct: 299 TAEEVEYIRGTHDFLGINFYTA 320
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 194/322 (60%), Gaps = 32/322 (9%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--GNVHD--NGDIASDGYHKYKED 120
FP F G+ T++YQ+EGA +E+G+ P+IWDT TH V D GDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 121 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
VK++ + G YRFSISW+R++P G VN G+ YYN+LINEL+++GI+P VT++H+D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGY--DIGIA 237
LPQAL+D GGW N + + YA V F+ FGDRV W T N+P F + GY +IG+A
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNDPLTF-MDGYASEIGMA 189
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
P +P + Y+A H V+ AHA + LY + ++ +Q G +G+S+
Sbjct: 190 PSIN-TPGIGD----------YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWC 238
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVY--GDYPNIMKKNVG----------SRLPLF 345
P TNS ED + + Y F +G A+P+ GDYP ++K V SRLP F
Sbjct: 239 EPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQF 298
Query: 346 TYLESKQVKGSADFLGVNNYNS 367
T E + ++G+ DFLG+N Y +
Sbjct: 299 TAEEVEYIRGTHDFLGINFYTA 320
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--GNVHD--NGDIASDGYHKYKED 120
FP F G+ T++YQ+EGA +E+G+ P+IWDT TH V D GDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 121 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
VK++ + G YRFSISW+R++P G VN G+ YYN+LINEL+++GI+P VT++H+D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGY--DIGIA 237
LPQAL+D GGW N + + YA V F+ FGDRV W T N P F + GY +IG+A
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNSPLTF-MDGYASEIGMA 189
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
P +P + Y+A H V+ AHA + LY + ++ +Q G +G+S+
Sbjct: 190 PSIN-TPGIGD----------YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWC 238
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVY--GDYPNIMKKNVG----------SRLPLF 345
P TNS ED + + Y F +G A+P+ GDYP ++K V SRLP F
Sbjct: 239 EPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQF 298
Query: 346 TYLESKQVKGSADFLGVNNYNS 367
T E + ++G+ DFLG+N Y +
Sbjct: 299 TAEEVEYIRGTHDFLGINFYTA 320
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 193/322 (59%), Gaps = 32/322 (9%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--GNVHD--NGDIASDGYHKYKED 120
FP F G+ T++YQ+EGA +E+G+ P+IWDT TH V D GDIA D YH YKED
Sbjct: 12 FPDEFKLGAATASYQIEGAWDENGKGPNIWDTLTHEHPDYVVDGATGDIADDSYHLYKED 71
Query: 121 VKLMADTGLDAYRFSISWSRLIPNGR-GPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
VK++ + G YRFSISW+R++P G VN G+ YYN+LINEL+++GI+P VT++H+D
Sbjct: 72 VKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWD 131
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGY--DIGIA 237
LPQAL+D GGW N + + YA V F+ FGDRV W T N P F + GY +IG+A
Sbjct: 132 LPQALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNAPLTF-MDGYASEIGMA 189
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
P +P + Y+A H V+ AHA + LY + ++ +Q G +G+S+
Sbjct: 190 PSIN-TPGIGD----------YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWC 238
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVY--GDYPNIMKKNVG----------SRLPLF 345
P TNS ED + + Y F +G A+P+ GDYP ++K V SRLP F
Sbjct: 239 EPATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQF 298
Query: 346 TYLESKQVKGSADFLGVNNYNS 367
T E + ++G+ DFLG+N Y +
Sbjct: 299 TAEEVEYIRGTHDFLGINFYTA 320
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 235 bits (599), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 187/327 (57%), Gaps = 30/327 (9%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVHD--NGDIASDGYHKY 117
K FP FIFG+ T+AYQ+EGA ED + SIWD F+H GNV NGDIA D YH+Y
Sbjct: 2 EKLRFPKDFIFGTATAAYQIEGAYKEDEKGESIWDRFSHIPGNVAKMHNGDIACDHYHRY 61
Query: 118 KEDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHH 177
KEDV+L+ G+ +YRFSI+W R+ P G G +N KG+Q+Y LI+ELI + I+P +T++H
Sbjct: 62 KEDVQLLKSLGIKSYRFSIAWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYH 121
Query: 178 YDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA 237
+DLPQ L+D GGW N + + YAN+ FREFGDRV W T NEP + LGY +G+
Sbjct: 122 WDLPQKLQD-IGGWANPQVADYYVDYANLLFREFGDRVKTWITHNEPWVASYLGYALGVH 180
Query: 238 PPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGL 297
+P K+ + +A H++LL+H + YR+ QD G IG+++
Sbjct: 181 -----APGIKDMKMA------LLAAHNILLSHFKAVKAYRELEQD---GQIGITLNLSTC 226
Query: 298 LPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKK-----NVGSRLP--LFTYLES 350
+ ED A R + + W + + G YP M K N+ LP LFT
Sbjct: 227 YSNSADEEDIAAAHRSDGWNNRWFLDAALKGTYPEDMIKIFSDTNIMPELPKELFT---- 282
Query: 351 KQVKGSADFLGVNNYNSGYIKDNPSSL 377
+V ++DFLG+N Y +K+N +
Sbjct: 283 -EVFETSDFLGINYYTRQVVKNNSEAF 308
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 183/319 (57%), Gaps = 24/319 (7%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVH--DNGDIASDGYHKYKEDV 121
FP F +G T+AYQ+EGA NEDGR SIWDTF H G V DNG++A D YH+ +EDV
Sbjct: 5 FPSDFKWGVATAAYQIEGAYNEDGRGMSIWDTFAHTPGKVKNGDNGNVACDSYHRVEEDV 64
Query: 122 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
+L+ D G+ YRFSISW R++P G G VN GL YY+ L++EL+++GI+P TL+H+DLP
Sbjct: 65 QLLKDLGVKVYRFSISWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLP 124
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
QAL+D+ GGW ++ + F YA + F+E G ++ W T NEP A L +G+ P
Sbjct: 125 QALQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAP-- 181
Query: 242 CSPPFKNCRKGNSSTEPYMAV-HHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPL 300
GN + + V HH+L+AH L+R + G IG++ T +P
Sbjct: 182 ----------GNKDLQLAIDVSHHLLVAHGRAVTLFR---ELGISGEIGIAPNTSWAVPY 228
Query: 301 TNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMK---KNVGSRLPLFTYLESKQVKGSA 357
+ ED A R N + W +P+ +G+YP M +N+G + P+ + + +
Sbjct: 229 RRTKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYKPPIVD-GDMELIHQPI 287
Query: 358 DFLGVNNYNSGYIKDNPSS 376
DF+G+N Y S + NP
Sbjct: 288 DFIGINYYTSSMNRYNPGE 306
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/344 (38%), Positives = 185/344 (53%), Gaps = 32/344 (9%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTF-THAGNVHD--NGDIASDGYHKYKEDV 121
P F +G T+AYQ+EGA ++DGR PSIWDTF G + D +G A D Y++ ED+
Sbjct: 9 LPKDFQWGFATAAYQIEGAVDQDGRGPSIWDTFCAQPGKIADGSSGVTACDSYNRTAEDI 68
Query: 122 KLMADTGLDAYRFSISWSRLIPNG-RG-PVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
L+ G +YRFSISWSR+IP G RG VN G+ +Y +++L+ GI P +TL H+D
Sbjct: 69 ALLKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWD 128
Query: 180 LPQALEDEYGGWINQT-IVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAP 238
LP+ L YGG +N+T DF YA V FR +V W T NEP A+ GY G
Sbjct: 129 LPEGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVRNWITFNEPLCSAIPGYGSGTFA 187
Query: 239 PKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQ----DKQHGYIGMSIFT 294
P R S++EP+ H++L+AH + YR +++ D Q G + FT
Sbjct: 188 PGR-----------QSTSEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFT 236
Query: 295 YGLLPLTNST-EDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQV 353
Y P + D A +R +F W A+P+ GDYP M+K +G RLP FT E V
Sbjct: 237 Y---PWDAADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALV 293
Query: 354 KGSADFLGVNNYNSGYIKDNPSSLKQELRDWNADTAAEIFCMFS 397
GS DF G+N+Y S YI+ S + DT + +F+
Sbjct: 294 HGSNDFYGMNHYTSNYIRHRSSPASAD------DTVGNVDVLFT 331
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/318 (39%), Positives = 175/318 (55%), Gaps = 21/318 (6%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVH--DNGDIASDGYHKYKEDV 121
FP GF++GS T++YQ+EGAA EDGR PSIWDT+ G V D GD+A+D YH+++EDV
Sbjct: 18 FPEGFLWGSATASYQIEGAAAEDGRTPSIWDTYARTPGRVRNGDTGDVATDHYHRWREDV 77
Query: 122 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
LMA+ GL AYRFS++W R+ P GRGP KGL +Y L +EL++ GIQP TL+H+DLP
Sbjct: 78 ALMAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLP 137
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
Q LE+ GGW + + F YA + GDRV WTT+NEP A LGY G+ P R
Sbjct: 138 QELENA-GGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAPGR 196
Query: 242 CSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLT 301
P A HH+ L H + R + ++I + + PLT
Sbjct: 197 TDP-----------VAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNI--HHVRPLT 243
Query: 302 NSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVK---GSAD 358
+S DA A +R + P++ G YP + K+ L ++++ ++ D
Sbjct: 244 DSDADADAVRRIDALANRVFTGPMLQGAYPEDLVKDTAG-LTDWSFVRDGDLRLAHQKLD 302
Query: 359 FLGVNNYNSGYIKDNPSS 376
FLGVN Y+ + + S
Sbjct: 303 FLGVNYYSPTLVSEADGS 320
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 172/315 (54%), Gaps = 20/315 (6%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVH--DNGDIASDGYHKYKEDV 121
FP FI+G+ TS+YQ+EGA NEDG+ SIWD F+H G + D GDIA D YH Y+ED+
Sbjct: 13 FPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIENGDTGDIACDHYHLYREDI 72
Query: 122 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
+LM + G+ +YRFS SW R++P G+G VN KGL +Y L++ L+ I+P +TL+H+DLP
Sbjct: 73 ELMKEIGIRSYRFSTSWPRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLP 132
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
QAL+D+ GGW N+ + F YA + F EF V W T NEP A G+ G P
Sbjct: 133 QALQDK-GGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGNHAP-- 189
Query: 242 CSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLT 301
+ FK + HH+LL+H ++R ++ G IG+++ P
Sbjct: 190 GTKDFKTALQ---------VAHHLLLSHGMAVDIFR---EEDLPGEIGITLNLTPAYPAG 237
Query: 302 NSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQ--VKGSADF 359
+S +D A +D++ W +P+ G YP + L FT + DF
Sbjct: 238 DSEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISRDIDF 297
Query: 360 LGVNNYNSGYIKDNP 374
LG+N Y+ ++ P
Sbjct: 298 LGINYYSRMVVRHKP 312
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 182/322 (56%), Gaps = 23/322 (7%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNV--HDNGDIASDGYHKYKEDV 121
FP F++G+ TS+YQ+EG +E GR PSIWDTF G V D GD+A D +H +KEDV
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 122 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
+LM G YRFS++W R++P G +N +GL +Y L++E+ G+ P +TL+H+DLP
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 132
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
Q +EDE GGW + +Q F YA+V FG+R+++W T+NEP ++LGY G
Sbjct: 133 QWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTG-----E 186
Query: 242 CSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLT 301
+P +N R E + A HH+L+ H + L++ + G IG+++ + +
Sbjct: 187 HAPGHENWR------EAFTAAHHILMCHGIASNLHK---EKGLTGKIGITLNMEHVDAAS 237
Query: 302 NSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLE---SKQVKGSAD 358
ED A R + F+ W A PL G YP M + G+ L +++ + ++ D
Sbjct: 238 ERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGD 297
Query: 359 FLGVNNYNSGYIKD-NPSSLKQ 379
FLG+N Y I+ N +SL Q
Sbjct: 298 FLGINYYTRSIIRSTNDASLLQ 319
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 182/322 (56%), Gaps = 23/322 (7%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNV--HDNGDIASDGYHKYKEDV 121
FP F++G+ TS+YQ+EG +E GR PSIWDTF G V D GD+A D +H +KEDV
Sbjct: 12 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 71
Query: 122 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
+LM G YRFS++W R++P G +N +GL +Y L++E+ G+ P +TL+H+DLP
Sbjct: 72 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 130
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
Q +EDE GGW + +Q F YA+V FG+R+++W T+NEP ++LGY G
Sbjct: 131 QWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTG-----E 184
Query: 242 CSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLT 301
+P +N R E + A HH+L+ H + L++ + G IG+++ + +
Sbjct: 185 HAPGHENWR------EAFTAAHHILMCHGIASNLHK---EKGLTGKIGITLNMEHVDAAS 235
Query: 302 NSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLES---KQVKGSAD 358
ED A R + F+ W A PL G YP M + G+ L +++ + ++ D
Sbjct: 236 ERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGD 295
Query: 359 FLGVNNYNSGYIKD-NPSSLKQ 379
FLG+N Y I+ N +SL Q
Sbjct: 296 FLGINYYTRSIIRSTNDASLLQ 317
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 182/322 (56%), Gaps = 23/322 (7%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNV--HDNGDIASDGYHKYKEDV 121
FP F++G+ TS+YQ+EG +E GR PSIWDTF G V D GD+A D +H +KEDV
Sbjct: 14 FPATFMWGTSTSSYQIEGGTDEGGRTPSIWDTFCQIPGKVIGGDCGDVACDHFHHFKEDV 73
Query: 122 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
+LM G YRFS++W R++P G +N +GL +Y L++E+ G+ P +TL+H+DLP
Sbjct: 74 QLMKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLP 132
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
Q +EDE GGW + +Q F YA+V FG+R+++W T+NEP ++LGY G
Sbjct: 133 QWIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTG-----E 186
Query: 242 CSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLT 301
+P +N R E + A HH+L+ H + L++ + G IG+++ + +
Sbjct: 187 HAPGHENWR------EAFTAAHHILMCHGIASNLHK---EKGLTGKIGITLNMEHVDAAS 237
Query: 302 NSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLE---SKQVKGSAD 358
ED A R + F+ W A PL G YP M + G+ L +++ + ++ D
Sbjct: 238 ERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGD 297
Query: 359 FLGVNNYNSGYIKD-NPSSLKQ 379
FLG+N Y I+ N +SL Q
Sbjct: 298 FLGINYYTRSIIRSTNDASLLQ 319
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/319 (37%), Positives = 176/319 (55%), Gaps = 24/319 (7%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVH--DNGDIASDGYHKYKEDV 121
FP F++G+ T+AYQ+EGA EDGR SIWDTF H G V DNG++A D YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 122 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
+LM + G+ YRFS+SW R+ PNG G VN KGL YY+ +++ L +GI+P TL+H+DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
QAL+D GGW N+ +Q F +A FREF ++ +W T NEP A L +G+ P
Sbjct: 125 QALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP-- 181
Query: 242 CSPPFKNCRKGNSSTEPYMAV-HHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPL 300
G ++ + + V HH+L+AH R +R + G IG++ +P
Sbjct: 182 ----------GLTNLQTAIDVGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPY 228
Query: 301 TNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMK---KNVGSRLPLFTYLESKQVKGSA 357
+ S ED A R W P+ G YP + G+ +P+ + +
Sbjct: 229 STSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPI-QDGDMDIIGEPI 287
Query: 358 DFLGVNNYNSGYIKDNPSS 376
D +G+N Y+ + NP +
Sbjct: 288 DMIGINYYSMSVNRFNPEA 306
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/319 (37%), Positives = 176/319 (55%), Gaps = 24/319 (7%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVH--DNGDIASDGYHKYKEDV 121
FP F++G+ T+AYQ+EGA EDGR SIWDTF H G V DNG++A D YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 122 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
+LM + G+ YRFS+SW R+ PNG G VN KGL YY+ +++ L +GI+P TL+H+DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
QAL+D GGW N+ +Q F +A FREF ++ +W T NEP A L +G+ P
Sbjct: 125 QALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP-- 181
Query: 242 CSPPFKNCRKGNSSTEPYMAV-HHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPL 300
G ++ + + V HH+L+AH R +R + G IG++ +P
Sbjct: 182 ----------GLTNLQTAIDVGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPY 228
Query: 301 TNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMK---KNVGSRLPLFTYLESKQVKGSA 357
+ S ED A R W P+ G YP + G+ +P+ + +
Sbjct: 229 STSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPI-QDGDMDIIGEPI 287
Query: 358 DFLGVNNYNSGYIKDNPSS 376
D +G+N Y+ + NP +
Sbjct: 288 DMIGINYYSMSVNRFNPEA 306
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 186/321 (57%), Gaps = 25/321 (7%)
Query: 63 RDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVH--DNGDIASDGYHKYKE 119
+ FP GF++G T++YQ+EG+ DG SIW TF+H GNV D GD+A D Y+++KE
Sbjct: 26 KKFPEGFLWGVATASYQIEGSPLADGAGMSIWHTFSHTPGNVKNGDTGDVACDHYNRWKE 85
Query: 120 DVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
D++++ G+ AYRFSISW R++P G G VN KGL +YN +I+ L+ GI P VT++H+D
Sbjct: 86 DIEIIEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWD 145
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPP 239
LP AL+ + GGW N+ I F Y+ V F FGDRV W T+NEP A++G+ G+ P
Sbjct: 146 LPFALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAP 204
Query: 240 KRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLL- 298
+ AVH++L AHA +++R+ +D G IG+ +F G
Sbjct: 205 GM-----------RDIYVAFRAVHNLLRAHARAVKVFRETVKD---GKIGI-VFNNGYFE 249
Query: 299 PLTNSTEDAIATQ---RYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKG 355
P + ED A + ++N++ + NP+ GDYP ++ + LP + +++
Sbjct: 250 PASEKEEDIRAVRFMHQFNNYPL--FLNPIYRGDYPELVLEFAREYLPENYKDDMSEIQE 307
Query: 356 SADFLGVNNYNSGYIKDNPSS 376
DF+G+N Y+ +K +P +
Sbjct: 308 KIDFVGLNYYSGHLVKFDPDA 328
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 176/319 (55%), Gaps = 24/319 (7%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVH--DNGDIASDGYHKYKEDV 121
FP F++G+ T+AYQ+EGA EDGR SIWDTF H G V DNG++A D YH+Y+ED+
Sbjct: 6 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 65
Query: 122 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
+LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L +GI+P TL+H+DLP
Sbjct: 66 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 125
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
QAL+D GGW N+ +Q F +A FREF ++ +W T NEP A L +G+ P
Sbjct: 126 QALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP-- 182
Query: 242 CSPPFKNCRKGNSSTEPYMAV-HHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPL 300
G ++ + + V HH+L+AH R +R + G IG++ +P
Sbjct: 183 ----------GLTNLQTAIDVGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPY 229
Query: 301 TNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMK---KNVGSRLPLFTYLESKQVKGSA 357
+ S ED A R W P+ G YP + G+ +P+ + +
Sbjct: 230 STSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPI-QDGDMDIIGEPI 288
Query: 358 DFLGVNNYNSGYIKDNPSS 376
D +G+N Y+ + NP +
Sbjct: 289 DMIGINYYSMSVNRFNPEA 307
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 176/319 (55%), Gaps = 24/319 (7%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVH--DNGDIASDGYHKYKEDV 121
FP F++G+ T+AYQ+EGA EDGR SIWDTF H G V DNG++A D YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 122 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
+LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L +GI+P TL+H+DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
QAL+D GGW N+ +Q F +A FREF ++ +W T NEP A L +G+ P
Sbjct: 125 QALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP-- 181
Query: 242 CSPPFKNCRKGNSSTEPYMAV-HHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPL 300
G ++ + + V HH+L+AH R +R + G IG++ +P
Sbjct: 182 ----------GLTNLQTAIDVGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPY 228
Query: 301 TNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMK---KNVGSRLPLFTYLESKQVKGSA 357
+ S ED A R W P+ G YP + G+ +P+ + +
Sbjct: 229 STSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPI-QDGDMDIIGEPI 287
Query: 358 DFLGVNNYNSGYIKDNPSS 376
D +G+N Y+ + NP +
Sbjct: 288 DMIGINYYSMSVNRFNPEA 306
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 176/319 (55%), Gaps = 24/319 (7%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA-GNVH--DNGDIASDGYHKYKEDV 121
FP F++G+ T+AYQ+EGA EDGR SIWDTF H G V DNG++A D YH+Y+ED+
Sbjct: 5 FPQDFMWGTATAAYQIEGAYQEDGRGLSIWDTFAHTPGKVFNGDNGNVACDSYHRYEEDI 64
Query: 122 KLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
+LM + G+ YRFS+SW R+ PNG G VN +GL YY+ +++ L +GI+P TL+H+DLP
Sbjct: 65 RLMKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLP 124
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
QAL+D GGW N+ +Q F +A FREF ++ +W T NEP A L +G+ P
Sbjct: 125 QALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAP-- 181
Query: 242 CSPPFKNCRKGNSSTEPYMAV-HHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPL 300
G ++ + + V HH+L+AH R +R + G IG++ +P
Sbjct: 182 ----------GLTNLQTAIDVGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPY 228
Query: 301 TNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMK---KNVGSRLPLFTYLESKQVKGSA 357
+ S ED A R W P+ G YP + G+ +P+ + +
Sbjct: 229 STSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPI-QDGDMDIIGEPI 287
Query: 358 DFLGVNNYNSGYIKDNPSS 376
D +G+N Y+ + NP +
Sbjct: 288 DMIGINYYSMSVNRFNPEA 306
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 161/317 (50%), Gaps = 19/317 (5%)
Query: 63 RDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH-AGNVH--DNGDIASDGYHKYKE 119
+ FP GF++G+ TS+YQ+EGA NEDG+ SIWD FT G + D+GD+A D YH+Y++
Sbjct: 24 KKFPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDHYHRYEQ 83
Query: 120 DVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
D+ LM GL YRFSI+W+R+ P+ +N +GL +Y L+ L I P TL+H+D
Sbjct: 84 DLDLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWD 143
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPP 239
LPQ +EDE GGW+++ F Y + GD++ W T NEP GY +G+ P
Sbjct: 144 LPQWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAP 202
Query: 240 KRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLP 299
P HH+LL+H + +R +G+++ + P
Sbjct: 203 GLKDPTLGG-----------RVAHHLLLSHGQALQAFRA--LSPAGSQMGITLNFNTIYP 249
Query: 300 LTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQ-VKGSAD 358
++ D A +R + F PL+ G Y N LP F E Q + D
Sbjct: 250 VSAEPADVEAARRMHSFQNELFLEPLIRGQY-NQATLMAYPNLPEFIAPEDMQTISAPID 308
Query: 359 FLGVNNYNSGYIKDNPS 375
FLGVN YN +K +P
Sbjct: 309 FLGVNYYNPMRVKSSPQ 325
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 161/317 (50%), Gaps = 19/317 (5%)
Query: 63 RDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH-AGNVH--DNGDIASDGYHKYKE 119
+ FP GF++G+ TS+YQ+EGA NEDG+ SIWD FT G + D+GD+A D YH+Y++
Sbjct: 3 KKFPEGFLWGAATSSYQIEGAWNEDGKGESIWDRFTRIPGKIKNGDSGDVACDHYHRYEQ 62
Query: 120 DVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYD 179
D+ LM GL YRFSI+W+R+ P+ +N +GL +Y L+ L I P TL+H+D
Sbjct: 63 DLDLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWD 122
Query: 180 LPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPP 239
LPQ +EDE GGW+++ F Y + GD++ W T NEP GY +G+ P
Sbjct: 123 LPQWVEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAP 181
Query: 240 KRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLP 299
P HH+LL+H + +R +G+++ + P
Sbjct: 182 GLKDPTLGG-----------RVAHHLLLSHGQALQAFRA--LSPAGSQMGITLNFNTIYP 228
Query: 300 LTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQ-VKGSAD 358
++ D A +R + F PL+ G Y N LP F E Q + D
Sbjct: 229 VSAEPADVEAARRMHSFQNELFLEPLIRGQY-NQATLMAYPNLPEFIAPEDMQTISAPID 287
Query: 359 FLGVNNYNSGYIKDNPS 375
FLGVN YN +K +P
Sbjct: 288 FLGVNYYNPMRVKSSPQ 304
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 157/300 (52%), Gaps = 26/300 (8%)
Query: 69 FIFGSGTSAYQVEGAANEDGRAPSIWDTFTH-AGNVHD--NGDIASDGYHKYKEDVKLMA 125
F++G TSAYQ+EGA EDGR PSIWDTF G + D G+ A D YH+Y+ED+ LM
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDTFARRPGAIRDGSTGEPACDHYHRYEEDIALMQ 67
Query: 126 DTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLPQALE 185
G+ YRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H+DLPQALE
Sbjct: 68 SLGVGVYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLAAGITPFLTLYHWDLPQALE 127
Query: 186 DEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKRCSPP 245
D GGW ++ F YA R DRV ++ T+NEP A LG+ G +P
Sbjct: 128 DR-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTG-----EHAPG 181
Query: 246 FKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTE 305
+N A HH+LL H R ++ G + YG E
Sbjct: 182 LRNLEAA------LRAAHHLLLGHGLAVEALRAA-GARRVGIVLNFAPAYG--------E 226
Query: 306 DAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSADFLGVNNY 365
D A + + + +P++ YP ++ L LE+ + DFLGVN Y
Sbjct: 227 DPEAVDVADRYHNRYFLDPILGRGYPESPFQDPPPAPILSRDLEA--IARPLDFLGVNYY 284
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 159/300 (53%), Gaps = 26/300 (8%)
Query: 69 FIFGSGTSAYQVEGAANEDGRAPSIWDTFTH-AGNVHD--NGDIASDGYHKYKEDVKLMA 125
F++G TSAYQ+EGA EDGR PSIWD F G + D G+ A D Y +Y+ED+ LM
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALMQ 67
Query: 126 DTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLPQALE 185
G+ AYRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H+DLP ALE
Sbjct: 68 SLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALE 127
Query: 186 DEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKRCSPP 245
E GGW ++ F YA R DRV ++ T+NEP A LG+ G +P
Sbjct: 128 -ERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTG-----EHAPG 181
Query: 246 FKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTE 305
+N A HH+LL H R ++ G + YG P
Sbjct: 182 LRNLEAA------LRAAHHLLLGHGLAVEALRAA-GARRVGIVLNFAPAYGEDPEAVD-- 232
Query: 306 DAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSADFLGVNNY 365
+A + +N F + +P++ YP ++ +P+ + + + V DFLGVN Y
Sbjct: 233 --VADRYHNRFFL----DPILGKGYPESPFRDPPP-VPILSR-DLELVARPLDFLGVNYY 284
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 159/300 (53%), Gaps = 26/300 (8%)
Query: 69 FIFGSGTSAYQVEGAANEDGRAPSIWDTFTH-AGNVHD--NGDIASDGYHKYKEDVKLMA 125
F++G TSAYQ+EGA EDGR PSIWD F G + D G+ A D Y +Y+ED+ LM
Sbjct: 8 FLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALMQ 67
Query: 126 DTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLPQALE 185
G+ AYRFS++W R++P GRG +NPKGL +Y+ L++ L++ GI P +TL+H+DLP ALE
Sbjct: 68 SLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALE 127
Query: 186 DEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKRCSPP 245
E GGW ++ F YA R DRV ++ T+NEP A LG+ G +P
Sbjct: 128 -ERGGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTG-----EHAPG 181
Query: 246 FKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTE 305
+N A HH+LL H R ++ G + YG P
Sbjct: 182 LRNLEAA------LRAAHHLLLGHGLAVEALRAA-GARRVGIVLNFAPAYGEDPEAVD-- 232
Query: 306 DAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSADFLGVNNY 365
+A + +N F + +P++ YP ++ +P+ + + + V DFLGVN Y
Sbjct: 233 --VADRYHNRFFL----DPILGKGYPESPFRDPPP-VPILSR-DLELVARPLDFLGVNYY 284
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 63 RDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGNVHDNGDIASDGYHKYKEDVK 122
+ P FIFG T+AYQ EGA + DG+ P WD + N + ASD YHKY D++
Sbjct: 3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLE-DNYWYTAEPASDFYHKYPVDLE 61
Query: 123 LMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLPQ 182
L + G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHH+D P+
Sbjct: 62 LAEEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPE 121
Query: 183 ALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKRC 242
AL G ++N+ ++ F YA CF EF + V+YWTT NE Y +G PP
Sbjct: 122 ALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIK 179
Query: 243 SPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTN 302
+ + + H+++++HA +LY+ + G + Y P
Sbjct: 180 Y----------DLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDP--E 227
Query: 303 STEDAIATQRYNDFLVGWIANPLVYGDYPN--------IMKKNVGS---RLPLFTYLESK 351
+ D A + + +I + G Y + I+ +N G R F L++
Sbjct: 228 NPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDA- 286
Query: 352 QVKGSADFLGVNNYNSGYIK 371
K DFLG+N Y S +++
Sbjct: 287 -AKDLNDFLGINYYMSDWMQ 305
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 63 RDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGNVHDNGDIASDGYHKYKEDVK 122
+ P FIFG T+AYQ EGA + DG+ P WD + N + ASD YHKY D++
Sbjct: 3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLE-DNYWYTAEPASDFYHKYPVDLE 61
Query: 123 LMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLPQ 182
L + G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHH+D P+
Sbjct: 62 LAEEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPE 121
Query: 183 ALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKRC 242
AL G ++N+ ++ F YA CF EF + V+YWTT NE Y +G PP
Sbjct: 122 ALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIK 179
Query: 243 SPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTN 302
+ + + H+++++HA +LY+ + G + Y P
Sbjct: 180 Y----------DLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDP--E 227
Query: 303 STEDAIATQRYNDFLVGWIANPLVYGDYPN--------IMKKNVGS---RLPLFTYLESK 351
+ D A + + +I + G Y + I+ +N G R F L++
Sbjct: 228 NPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDA- 286
Query: 352 QVKGSADFLGVNNYNSGYIK 371
K DFLG+N Y S +++
Sbjct: 287 -AKDLNDFLGINYYMSDWMQ 305
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 156/320 (48%), Gaps = 28/320 (8%)
Query: 63 RDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGNVHDNGDIASDGYHKYKEDVK 122
+ P FIFG T+AYQ EGA + DG+ P WD + N + ASD YHKY D++
Sbjct: 3 KTLPKDFIFGGATAAYQAEGATHTDGKGPVAWDKYLE-DNYWYTAEPASDFYHKYPVDLE 61
Query: 123 LMADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLPQ 182
L + G++ R SI+WSR+ P G G VN KG+++Y+ L E ++P VTLHH+D P+
Sbjct: 62 LAEEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPE 121
Query: 183 ALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKRC 242
AL G ++N+ ++ F YA CF EF + V+YWTT NE Y +G PP
Sbjct: 122 ALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIK 179
Query: 243 SPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTN 302
+ + + H+++++HA +LY+ + G + Y P
Sbjct: 180 Y----------DLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDP--E 227
Query: 303 STEDAIATQRYNDFLVGWIANPLVYGDYPN--------IMKKNVGS---RLPLFTYLESK 351
+ D A + + +I + G Y + I+ +N G R F L++
Sbjct: 228 NPADVRAAELEDIIHNKFILDATYLGHYCDKTMEGVNHILAENGGELDLRDEDFQALDA- 286
Query: 352 QVKGSADFLGVNNYNSGYIK 371
K DFLG+N Y S +++
Sbjct: 287 -AKDLNDFLGINYYMSDWMQ 305
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 154/331 (46%), Gaps = 47/331 (14%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--------------GNVHDNGDIA 110
P F++G +A+Q+EG E G+ S+ D T G + N + A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPNHE-A 65
Query: 111 SDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNSLINELISHGI 169
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y+ L +E + +GI
Sbjct: 66 IDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGI 125
Query: 170 QPHVTLHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFAL 229
+P VTL H++LP L EYGG+ N+ ++ F +A VCFR + D+V YW T NE N A
Sbjct: 126 EPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQA- 184
Query: 230 LGYDIGIAPPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIG 289
Y AP +K + Y A H+ L+A A ++ + + IG
Sbjct: 185 -NYQEDFAPFTNSGIVYK--EGDDREAIMYQAAHYELVASARAVKI---GHAINPNLNIG 238
Query: 290 MSIFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLE 349
+ + P T + +D + Q+ + A+ V+G YP +F Y E
Sbjct: 239 CMVAMCPIYPATCNPKDILMAQKAMQKRY-YFADVHVHGFYPE----------HIFKYWE 287
Query: 350 SKQVK-------------GSADFLGVNNYNS 367
K +K G+ D++G + Y S
Sbjct: 288 RKAIKVDFTERDKKDLFEGTVDYIGFSYYMS 318
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 154/331 (46%), Gaps = 47/331 (14%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--------------GNVHDNGDIA 110
P F++G +A+Q+EG E G+ S+ D T G + N + A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITAGVLEGKYYPNHE-A 65
Query: 111 SDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNSLINELISHGI 169
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y+ L +E + +GI
Sbjct: 66 IDFYHHYKEDVKLFAEMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGI 125
Query: 170 QPHVTLHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFAL 229
+P VTL H++LP L EYGG+ N+ ++ F +A VCFR + D+V YW T NE N A
Sbjct: 126 EPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQA- 184
Query: 230 LGYDIGIAPPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIG 289
Y AP +K + Y A H+ L+A A ++ + + IG
Sbjct: 185 -NYQEDFAPFTNSGIVYK--EGDDREAIMYQAAHYELVASARAVKI---GHAINPNLNIG 238
Query: 290 MSIFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLE 349
+ + P T + +D + Q+ + A+ V+G YP +F Y E
Sbjct: 239 CMVAMCPIYPATCNPKDILMAQKAMQKRY-YFADVHVHGFYPE----------HIFKYWE 287
Query: 350 SKQVK-------------GSADFLGVNNYNS 367
K +K G+ D++G + Y S
Sbjct: 288 RKAIKVDFTERDKKDLFEGTVDYIGFSYYMS 318
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 154/321 (47%), Gaps = 27/321 (8%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--------------GNVHDNGDIA 110
P F++G +A+Q+EG E G+ S+ D T G + N + A
Sbjct: 7 LPENFLWGGAVAAHQLEGGWQEGGKGISVADVXTAGRHGVAREITAGVLEGKYYPNHE-A 65
Query: 111 SDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNSLINELISHGI 169
D YH YKEDVKL A+ G +R SI+W+R+ P G N GLQ+Y+ L +E + +GI
Sbjct: 66 IDFYHHYKEDVKLFAEXGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGI 125
Query: 170 QPHVTLHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFAL 229
+P VTL H++LP L EYGG+ N+ ++ F +A VCFR + D+V YW T NE N A
Sbjct: 126 EPVVTLSHFELPYHLVTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNEINNQA- 184
Query: 230 LGYDIGIAPPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIG 289
Y AP +K + Y A H+ L+A A ++ + + IG
Sbjct: 185 -NYQEDFAPFTNSGIVYK--EGDDREAIXYQAAHYELVASARAVKI---GHAINPNLNIG 238
Query: 290 MSIFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLE 349
+ + P T + +D + Q+ + A+ V+G YP + K + + E
Sbjct: 239 CXVAXCPIYPATCNPKDILXAQKAXQKRY-YFADVHVHGFYPEHIFKYWERKAIKVDFTE 297
Query: 350 SKQ---VKGSADFLGVNNYNS 367
+ +G+ D++G + Y S
Sbjct: 298 RDKKDLFEGTVDYIGFSYYXS 318
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 161/339 (47%), Gaps = 27/339 (7%)
Query: 63 RDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGNVH----DNGDIAS------- 111
R FP GF++G +A+Q+EG E G+ S D T N +G +A
Sbjct: 9 RAFPEGFLWGGAVAAHQLEGGYKEGGKGLSTADIXTLGTNERPREITDGVVAGKYYPNHQ 68
Query: 112 --DGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNSLINELISHG 168
D YH+Y ED++L A+ G +R SI+W+R+ PNG N GLQ+Y+ L +E + +G
Sbjct: 69 AIDFYHRYPEDIELFAEXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNG 128
Query: 169 IQPHVTLHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFA 228
IQP VTL H++ P L +YGGW N+ ++Q + +A VCF + D+V+YW T NE N
Sbjct: 129 IQPVVTLAHFEXPYHLVKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNEINNQT 188
Query: 229 LLGYD-IGIAPPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGY 287
D + P +N + Y A H+ L+A A+ +L + D Q
Sbjct: 189 NFESDGAXLTDSGIIHQPGENRERWX-----YQAAHYELVASAAAVQLGHQINPDFQ--- 240
Query: 288 IGMSIFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSR-LPLFT 346
IG I + PLT + D + QR + A+ G YP ++ S L
Sbjct: 241 IGCXIAXCPIYPLTAAPADVLFAQRAXQTRF-YFADVHCNGTYPQWLRNRFESEHFNLDI 299
Query: 347 YLESKQV--KGSADFLGVNNYNSGYIKDNPSSLKQELRD 383
E ++ G+ D++G + Y S +KD E D
Sbjct: 300 TAEDLKILQAGTVDYIGFSYYXSFTVKDTGKLAYNEEHD 338
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 126/272 (46%), Gaps = 33/272 (12%)
Query: 61 SKRDFPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHA--------------GNVHDN 106
K P F++G +A+QVEG N+ G+ PSI D T G + N
Sbjct: 4 KKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPN 63
Query: 107 GDIASDGYHKYKEDVKLMADTGLDAYRFSISWSRLIPNG-RGPVNPKGLQYYNSLINELI 165
+ A D Y YKED+KL A+ G +R SI+W+R+ P G N +GL++Y+ + +EL+
Sbjct: 64 HE-AVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELL 122
Query: 166 SHGIQPHVTLHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPN 225
+ I+P +TL H+++P L +YG W N+ +V F +A V F + +V YW T NE N
Sbjct: 123 KYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEIN 182
Query: 226 -----AFALLGYDIGIAPPKRCSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNY 280
L GY C N Y +HH +A A + R+
Sbjct: 183 NQRNWRAPLFGY---------CCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRIN 233
Query: 281 QDKQHGYIGMSIFTYGLLPLTNSTEDAIATQR 312
+ + +G + L P + + +D + Q
Sbjct: 234 PEMK---VGCMLAMVPLYPYSCNPDDVMFAQE 262
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 148/316 (46%), Gaps = 23/316 (7%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGNVHD--NGDIASDGYHKYKEDVK 122
FP F +G TS Q EG + R + +D D ASD YH+ + D+
Sbjct: 3 FPKEFWWGGATSGPQSEGRFAKQHRNLFDYWYEEEPDLFYDYVGPDTASDAYHQIESDLT 62
Query: 123 LMADTGLDAYRFSISWSRLIPN-GRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLP 181
L+A G ++YR SI W+RLI + + +NP GL YYN +I+ +++GI+P + LHH+DLP
Sbjct: 63 LLASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFDLP 122
Query: 182 QALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKR 241
AL YGGW ++ +V F A++ VCF +FGDRV W NEP Y + P
Sbjct: 123 IALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWFVHNEPMVVVEGSYLMQFHYPAI 182
Query: 242 CSPPFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLT 301
G + + +++ LA A V + YR+ + G IG + P +
Sbjct: 183 VD--------GKKAVQ---VAYNLALATAKVIQAYRRGPAELSDGRIGTILNLTPAYPAS 231
Query: 302 NSTEDAIATQRYNDFLVGWIANPLVYGDYPN----IMKKN--VGSRLPLFTYLESKQVKG 355
S D A + V+G +P ++KK+ + P L ++
Sbjct: 232 QSEADMAAAHFAELWNNDLFMEAAVHGKFPEELVAVLKKDGVLWQSTPEELALIAEN--- 288
Query: 356 SADFLGVNNYNSGYIK 371
D+LG+N Y+ +K
Sbjct: 289 RVDYLGLNFYHPKRVK 304
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 138/314 (43%), Gaps = 38/314 (12%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTHAGNVHDNGDIASDGYHKYKEDVKLM 124
FP F+FG+ TS++Q+EG + W + G + A + + Y++D++LM
Sbjct: 5 FPEMFLFGTATSSHQIEGNNRWND-----WWYYEQIGKLPYRSGKACNHWELYRDDIQLM 59
Query: 125 ADTGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNSLINELISHGIQPHVTLHHYDLPQAL 184
G +AYRFSI WSRL P N Y +I+ L++ GI P VTLHH+ P
Sbjct: 60 TSLGYNAYRFSIEWSRLFPE-ENKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLWF 118
Query: 185 EDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKRCSP 244
+ GG++ + ++ + Y E ++V T NEP + ++GY PP
Sbjct: 119 MKK-GGFLREENLKHWEKYIEKV-AELLEKVKLVATFNEPMVYVMMGYLTAYWPP-FIRS 175
Query: 245 PFKNCRKGNSSTEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNST 304
PFK + ++L AHA L ++ +G+ +LP ++
Sbjct: 176 PFK----------AFKVAANLLKAHAIAYELLHGKFK------VGIVKNIPIILPASDKE 219
Query: 305 EDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSADFLGVNN 364
D A ++ ++ + + G Y + K R+P + ADF+GVN
Sbjct: 220 RDRKAAEKADNLFNWHFLDAIWSGKYRGVFKT---YRIP----------QSDADFIGVNY 266
Query: 365 YNSGYIKDNPSSLK 378
Y + ++ + LK
Sbjct: 267 YTASEVRHTWNPLK 280
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 128/355 (36%), Gaps = 81/355 (22%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH----------AGNVHDNGDIASDGY 114
FP F+FG + +Q E S W + H +G+ +NG Y
Sbjct: 4 FPKDFLFGWSQAGFQSEMGTPGSEDPNSDWYAWVHDRENIAAGLVSGDFPENGPGYWGNY 63
Query: 115 HKYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPV------------------------- 149
K+ + + M GL A R + WSR+ P V
Sbjct: 64 RKFHDAAQAM---GLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLD 120
Query: 150 ---NPKGLQYYNSLINELISHGIQPHVTLHHYDLPQALEDEYG----------GWINQTI 196
N + +Y + ++L S GI + L+H+ LP L D GW++
Sbjct: 121 KMANRDAINHYREMFSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLDVRT 180
Query: 197 VQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIAPPKRCSPPFKNCRKGNSST 256
V +F ++ + D V ++T+NEPN LGY A K PP C +
Sbjct: 181 VIEFAKFSAYVAWKLDDLVYMYSTMNEPNVVWGLGY----AAVKSGFPPGYLCLECAGRA 236
Query: 257 EPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTEDAIATQRYNDF 316
+ H A+ +V + +K +G+ PLT++ +A ++++
Sbjct: 237 MKNLVQAHA-RAYDAVKAITKKP--------VGVIYANSDFTPLTDADREAAERAKFDN- 286
Query: 317 LVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSADFLGVNNYNSGYIK 371
+ + +++ +G +KG D++GVN Y ++
Sbjct: 287 ---------RWAFFDAVVRGQLGGS-------TRDDLKGRLDWIGVNYYTRQVVR 325
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH------AGNVHDNGDIASDG---YH 115
FP F+FG S +Q E S W + H +G V +GD+ +G +H
Sbjct: 4 FPKNFMFGYSWSGFQFEMGL-PGSEVESDWWVWVHDKENIASGLV--SGDLPENGPAYWH 60
Query: 116 KYKEDVKLMADTGLDAYRFSISWSRLIPNGRGPV-------------------------- 149
YK+D + G+D R I W+R+ P V
Sbjct: 61 LYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELE 120
Query: 150 ---NPKGLQYYNSLINELISHGIQPHVTLHHYDLPQALEDEYG-----------GWINQT 195
N + L++Y + ++ G + L+H+ LP + D GW+++
Sbjct: 121 KIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEK 180
Query: 196 IVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGY 232
V +F +A D V W+T+NEPN GY
Sbjct: 181 TVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGY 217
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 83/217 (38%), Gaps = 51/217 (23%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH------AGNVHDNGDIASDG---YH 115
FP F+ G +S +Q E S W + H AG V +GD +G ++
Sbjct: 3 FPKDFMIGYSSSPFQFEAGIPGSEDPNSDWWVWVHDPENTAAGLV--SGDFPENGPGYWN 60
Query: 116 KYKEDVKLMADTGLDAYRFSISWSRLIP----NGRGPV---------------------- 149
+ D L G++ R + WSR+ P N + PV
Sbjct: 61 LNQNDHDLAEKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLD 120
Query: 150 ---NPKGLQYYNSLINELISHGIQPHVTLHHYDLPQALEDEY-----------GGWINQT 195
N + + +Y + + + G + + L+H+ LP L + GW+N+
Sbjct: 121 ELANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEE 180
Query: 196 IVQDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGY 232
V +F YA + G+ W+T+NEPN GY
Sbjct: 181 SVVEFAKYAAYIAWKMGELPVMWSTMNEPNVVYEQGY 217
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 135/356 (37%), Gaps = 80/356 (22%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH----------AGNVHDNGDIASDGY 114
FP F FG + +Q E + W + H +G++ +NG Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 115 HKYKEDVKLMADTGLDAYRFSISWSRLIPN----------GRGPV--------------- 149
+ ++ + M GL R ++ WSR+ PN + V
Sbjct: 64 KTFHDNAQKM---GLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDE 120
Query: 150 --NPKGLQYYNSLINELISHGIQPHVTLHHYDLPQALEDEY----------GGWINQTIV 197
N L +Y + +L S G+ + ++H+ LP L D GW++ V
Sbjct: 121 YANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTV 180
Query: 198 QDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA--PPKRCSPPFKNCRKGNSS 255
+F ++ +F D V ++T+NEPN LGY + PP S F+ R+
Sbjct: 181 YEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS--FELSRR---- 234
Query: 256 TEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTEDAIATQRYND 315
A+++++ AH AR Y + +G+ PLT+ +A+ ++
Sbjct: 235 -----AMYNIIQAH---ARAY-DGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDN 285
Query: 316 FLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSADFLGVNNYNSGYIK 371
W + ++ G+ +K V L KG D++GVN Y +K
Sbjct: 286 RW--WFFDAIIRGEITRGNEKIVRDDL-----------KGRLDWIGVNYYTRTVVK 328
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 135/356 (37%), Gaps = 80/356 (22%)
Query: 65 FPPGFIFGSGTSAYQVEGAA------NEDG----RAPSIWDTFTHAGNVHDNGDIASDGY 114
FP F FG + +Q E N DG P +G++ +NG Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDGYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 115 HKYKEDVKLMADTGLDAYRFSISWSRLIPN----------GRGPV--------------- 149
+ ++ + M GL R ++ WSR+ PN + V
Sbjct: 64 KTFHDNAQKM---GLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDE 120
Query: 150 --NPKGLQYYNSLINELISHGIQPHVTLHHYDLPQALEDEY----------GGWINQTIV 197
N L +Y + +L S G+ + ++H+ LP L D GW++ V
Sbjct: 121 YANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTV 180
Query: 198 QDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA--PPKRCSPPFKNCRKGNSS 255
+F ++ +F D V ++T+NEPN LGY + PP S F+ R+
Sbjct: 181 YEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS--FELSRR---- 234
Query: 256 TEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTEDAIATQRYND 315
A+++++ AH AR Y + +G+ PLT+ +A+ ++
Sbjct: 235 -----AMYNIIQAH---ARAY-DGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDN 285
Query: 316 FLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSADFLGVNNYNSGYIK 371
W + ++ G+ +K V L KG D++GVN Y +K
Sbjct: 286 RW--WFFDAIIRGEITRGNEKIVRDDL-----------KGRLDWIGVNYYTRTVVK 328
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 132/356 (37%), Gaps = 80/356 (22%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH----------AGNVHDNGDIASDGY 114
FP F FG + +Q E + W + H +G++ +NG Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 115 HKYKEDVKLMADTGLDAYRFSISWSRLIPN----------GRGPV--------------- 149
+ ++ + M GL R + WSR PN + V
Sbjct: 64 KTFHDNAQKM---GLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDE 120
Query: 150 --NPKGLQYYNSLINELISHGIQPHVTLHHYDLPQALEDEY----------GGWINQTIV 197
N L +Y + +L S G+ ++H+ LP L D GW++ V
Sbjct: 121 YANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTV 180
Query: 198 QDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA--PPKRCSPPFKNCRKGNSS 255
+F ++ +F D V ++T+NEPN LGY + PP S F+ R+
Sbjct: 181 YEFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS--FELSRR---- 234
Query: 256 TEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTEDAIATQRYND 315
A+++++ AH AR Y + +G+ PLT+ +A+ ++
Sbjct: 235 -----AMYNIIQAH---ARAY-DGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDN 285
Query: 316 FLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSADFLGVNNYNSGYIK 371
W + ++ G+ +K V L KG D++GVN Y +K
Sbjct: 286 RW--WFFDAIIRGEITRGNEKIVRDDL-----------KGRLDWIGVNYYTRTVVK 328
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 131/356 (36%), Gaps = 80/356 (22%)
Query: 65 FPPGFIFGSGTSAYQVEGAANEDGRAPSIWDTFTH----------AGNVHDNGDIASDGY 114
FP F FG + +Q E + W + H +G++ +NG Y
Sbjct: 4 FPNSFRFGWSQAGFQSEMGTPGSEDLNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNY 63
Query: 115 HKYKEDVKLMADTGLDAYRFSISWSRLIPN----------GRGPV--------------- 149
+ + + M GL R + WSR PN + V
Sbjct: 64 KTFHNNAQKM---GLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDE 120
Query: 150 --NPKGLQYYNSLINELISHGIQPHVTLHHYDLPQALEDEY----------GGWINQTIV 197
N L +Y + +L S G+ ++H+ LP L D GW++ V
Sbjct: 121 YANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTV 180
Query: 198 QDFTAYANVCFREFGDRVSYWTTVNEPNAFALLGYDIGIA--PPKRCSPPFKNCRKGNSS 255
+F ++ +F D V ++T+NEPN LGY + PP S F+ R+
Sbjct: 181 YEFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS--FELSRR---- 234
Query: 256 TEPYMAVHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTEDAIATQRYND 315
A+++++ AH AR Y + +G+ PLT+ +A+ ++
Sbjct: 235 -----AMYNIIQAH---ARAY-DGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDN 285
Query: 316 FLVGWIANPLVYGDYPNIMKKNVGSRLPLFTYLESKQVKGSADFLGVNNYNSGYIK 371
W + ++ G+ +K V L KG D++GVN Y +K
Sbjct: 286 RW--WFFDAIIRGEITRGNEKIVRDDL-----------KGRLDWIGVNYYTRTVVK 328
>pdb|3C37|A Chain A, X-ray Structure Of The Putative Zn-dependent Peptidase
Q74d82 At The Resolution 1.7 A. Northeast Structural
Genomics Consortium Target Gsr143a
pdb|3C37|B Chain B, X-ray Structure Of The Putative Zn-dependent Peptidase
Q74d82 At The Resolution 1.7 A. Northeast Structural
Genomics Consortium Target Gsr143a
Length = 253
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 325 LVYGDYPNIMKKNVGS---RLPLFTYLESKQVKGSADFLGVNN-YNSGYIKDNPSSLKQE 380
LV GD PN + + G + +Y S++ + ADFLGV Y +GY + +S Q+
Sbjct: 132 LVLGDNPNXLAQLAGQLFGKAGXXSY--SREYENQADFLGVETXYKAGYNPNGLTSFFQK 189
Query: 381 LRDWNADTAAEIFCMFST 398
L + T + + FST
Sbjct: 190 LNAXDGGTQSNVARFFST 207
>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|B Chain B, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|C Chain C, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|D Chain D, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|E Chain E, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|F Chain F, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|G Chain G, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|H Chain H, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|3VDR|A Chain A, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|B Chain B, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|C Chain C, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|D Chain D, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDQ|A Chain A, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|B Chain B, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|C Chain C, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|D Chain D, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
Length = 260
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 25/126 (19%)
Query: 252 GNSSTEPYMA------VHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTE 305
G ++ P M + ++ AH VA + + Y +HG +G++ T + E
Sbjct: 121 GTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVT--------ALE 172
Query: 306 DAIATQRYNDFLVGWIANPLVYGDYPNIMKKN-----------VGSRLPLFTYLESKQVK 354
+A N GW+ PLV I ++ + + P ++ +Q+
Sbjct: 173 NAGKGITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPEQLG 232
Query: 355 GSADFL 360
G+A FL
Sbjct: 233 GAAVFL 238
>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|B Chain B, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|C Chain C, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|D Chain D, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Length = 260
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 25/126 (19%)
Query: 252 GNSSTEPYMA------VHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTE 305
G ++ P+M + ++ AH VA + Y +HG +G + T + E
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVT--------ALE 172
Query: 306 DAIATQRYNDFLVGWIANPLVYGDYPNIMKKN-----------VGSRLPLFTYLESKQVK 354
A N GW+ +PLV + +KN + + P ++ +Q+
Sbjct: 173 TAGQGITANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLG 232
Query: 355 GSADFL 360
G+A FL
Sbjct: 233 GTAVFL 238
>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1WMB|B Chain B, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1X1T|A Chain A, Crystal Structure Of D-3-hydroxybutyrate Dehydrogenase
From Pseudomonas Fragi Complexed With Nad+
pdb|2ZTL|A Chain A, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|B Chain B, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|C Chain C, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|D Chain D, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTV|A Chain A, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|B Chain B, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|C Chain C, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|D Chain D, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
Length = 260
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 25/126 (19%)
Query: 252 GNSSTEPYMA------VHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTE 305
G ++ P+M + ++ AH VA + Y +HG +G + T + E
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVT--------ALE 172
Query: 306 DAIATQRYNDFLVGWIANPLVYGDYPNIMKKN-----------VGSRLPLFTYLESKQVK 354
A N GW+ PLV + +KN + + P ++ +Q+
Sbjct: 173 TAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLG 232
Query: 355 GSADFL 360
G+A FL
Sbjct: 233 GTAVFL 238
>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|B Chain B, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|C Chain C, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|D Chain D, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
Length = 260
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 25/126 (19%)
Query: 252 GNSSTEPYMA------VHHVLLAHASVARLYRKNYQDKQHGYIGMSIFTYGLLPLTNSTE 305
G ++ P+M + ++ AH VA + Y +HG +G + T + E
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVT--------ALE 172
Query: 306 DAIATQRYNDFLVGWIANPLVYGDYPNIMKKN-----------VGSRLPLFTYLESKQVK 354
A N GW+ PLV + +KN + + P ++ +Q+
Sbjct: 173 TAGQGITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLG 232
Query: 355 GSADFL 360
G+A FL
Sbjct: 233 GTAVFL 238
>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb)from Salmonella Enterica Serovar Typhimurium
pdb|1G1A|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb)from Salmonella Enterica Serovar Typhimurium
pdb|1G1A|C Chain C, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb)from Salmonella Enterica Serovar Typhimurium
pdb|1G1A|D Chain D, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb)from Salmonella Enterica Serovar Typhimurium
pdb|1KEU|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb) From Salmonella Enterica Serovar Typhimurium With
Dtdp-D-Glucose Bound
pdb|1KEU|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb) From Salmonella Enterica Serovar Typhimurium With
Dtdp-D-Glucose Bound
pdb|1KEW|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb) From Salmonella Enterica Serovar Typhimurium With
Thymidine Diphosphate Bound
pdb|1KEW|B Chain B, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase
(Rmlb) From Salmonella Enterica Serovar Typhimurium With
Thymidine Diphosphate Bound
Length = 361
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 292 IFTYGLLPLTNSTEDAIATQRYNDFLVGWIANPLVYGDYPNIMKKNVGSRLPLFT 346
+ TY LL + A+ + N+F I+ VYGD P+ + LPLFT
Sbjct: 102 VGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT 156
>pdb|2Z8D|A Chain A, The Galacto-N-Biose-LACTO-N-Biose I-Binding Protein
(Gl-Bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Lacto-N- Biose
pdb|2Z8D|B Chain B, The Galacto-N-Biose-LACTO-N-Biose I-Binding Protein
(Gl-Bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Lacto-N- Biose
pdb|2Z8E|A Chain A, The Galacto-n-biose-/lacto-n-biose I-binding Protein
(gl-bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Galacto- N-biose
pdb|2Z8E|B Chain B, The Galacto-n-biose-/lacto-n-biose I-binding Protein
(gl-bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Galacto- N-biose
pdb|2Z8F|A Chain A, The Galacto-N-Biose-LACTO-N-Biose I-Binding Protein
(Gl-Bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Lacto-N- Tetraose
pdb|2Z8F|B Chain B, The Galacto-N-Biose-LACTO-N-Biose I-Binding Protein
(Gl-Bp) Of The Abc Transporter From Bifidobacterium
Longum In Complex With Lacto-N- Tetraose
Length = 412
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 154 LQYYNSLINELISHGIQPHVTLHHYDLPQALEDEYGGWINQTIVQDFTAYAN 205
L ++N+ + +L+S G+ P T + P +GG Q I+++F N
Sbjct: 308 LDWFNTQVPDLVSQGLVPAATTEDAETPSEWSTFFGG---QDIMKEFKTANN 356
>pdb|3E05|A Chain A, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|B Chain B, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|C Chain C, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|D Chain D, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|E Chain E, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|F Chain F, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|G Chain G, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
pdb|3E05|H Chain H, Crystal Structure Of Precorrin-6y C5,15-Methyltransferase
From Geobacter Metallireducens Gs-15
Length = 204
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 95 DTFTHAGNVHDNGDIASDGYHKYK-EDVKLMADTGLDAYRFSISWSRLIPNGRGPVNPKG 153
D F A + ++ + K + +D +M D G + SI S L+PNGR +
Sbjct: 14 DEFATAKKLITKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERN 73
Query: 154 LQYYNSLINELISHGIQPHVTLHHYDLPQALED 186
QY I + + + +VTL P+ L+D
Sbjct: 74 PQYL-GFIRDNLKKFVARNVTLVEAFAPEGLDD 105
>pdb|3U7B|A Chain A, A New Crystal Structure Of A Fusarium Oxysporum Gh10
Xylanase Reveals The Presence Of An Extended Loop On Top
Of The Catalytic Cleft
pdb|3U7B|B Chain B, A New Crystal Structure Of A Fusarium Oxysporum Gh10
Xylanase Reveals The Presence Of An Extended Loop On Top
Of The Catalytic Cleft
pdb|3U7B|C Chain C, A New Crystal Structure Of A Fusarium Oxysporum Gh10
Xylanase Reveals The Presence Of An Extended Loop On Top
Of The Catalytic Cleft
pdb|3U7B|D Chain D, A New Crystal Structure Of A Fusarium Oxysporum Gh10
Xylanase Reveals The Presence Of An Extended Loop On Top
Of The Catalytic Cleft
pdb|3U7B|E Chain E, A New Crystal Structure Of A Fusarium Oxysporum Gh10
Xylanase Reveals The Presence Of An Extended Loop On Top
Of The Catalytic Cleft
Length = 327
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 169 IQPHVTLHHYDLPQALEDEYGGWINQTIVQDFTAYANVCFREFGDRVSYWTTVNE 223
++ H + H LP + + G W NQT+ + N + + ++W VNE
Sbjct: 79 LRCHTLVWHSQLPSWVAN--GNWNNQTLQAVMRDHINAVMGRYRGKCTHWDVVNE 131
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,798,870
Number of Sequences: 62578
Number of extensions: 567141
Number of successful extensions: 1399
Number of sequences better than 100.0: 84
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1054
Number of HSP's gapped (non-prelim): 94
length of query: 398
length of database: 14,973,337
effective HSP length: 101
effective length of query: 297
effective length of database: 8,652,959
effective search space: 2569928823
effective search space used: 2569928823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)