BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046013
(215 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80915|PR1B4_ARATH PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1
Length = 220
Score = 283 bits (724), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 170/203 (83%), Gaps = 2/203 (0%)
Query: 2 ATPATLPISNPQT--NTTTTTTQTQAPIATPAFRAFLSRLSSSIRYGFSQRRHWSELVDR 59
+ P LPISNPQT + ++ ++Q PIATPAFR F+++++ +++ G S+RR W+EL DR
Sbjct: 4 SAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAELADR 63
Query: 60 TAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLY 119
+A+S+P+S+++A RIRKN SYFKVNY+T+ ++ FSL++HPFSL+ LLCLL +W+FLY
Sbjct: 64 SALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLY 123
Query: 120 LFRPSDQPVVLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFR 179
LFRP+DQP+VLFGRTFSDRETLG L++ +I V+FLT VGS+L+SA+M+G A++CAHGAFR
Sbjct: 124 LFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFR 183
Query: 180 VPEDLFLDEQEPINSGFLSFLGG 202
PEDLFLDEQEP +GFLSFLGG
Sbjct: 184 APEDLFLDEQEPAATGFLSFLGG 206
>sp|Q9LYN0|PR1B1_ARATH PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1
Length = 209
Score = 276 bits (705), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/200 (72%), Positives = 167/200 (83%), Gaps = 6/200 (3%)
Query: 1 MATPATLPISNPQTNTTTTTTQTQAPIATPAFRAFLSRLSSSIRYGFSQRRHWSELVDRT 60
MATP TLP++N Q Q+Q PI TPAFR F SRLS+SIR G SQRR W+EL+DR+
Sbjct: 1 MATPPTLPVTNQQA------VQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRS 54
Query: 61 AMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYL 120
+M+RP+SL +A SRIRKNL+YFKVNYV ++ LVLAFSL SHP SLLVL+ LLG W+FLYL
Sbjct: 55 SMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYL 114
Query: 121 FRPSDQPVVLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRV 180
FRPSDQP+V+FGRTFSDRETL ALV+ TIVVVF+TSVGSLL SALM+G AIVC HGAF V
Sbjct: 115 FRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVV 174
Query: 181 PEDLFLDEQEPINSGFLSFL 200
P+DLFLDEQEP N+G LSFL
Sbjct: 175 PDDLFLDEQEPANAGLLSFL 194
>sp|Q9FLB6|PR1B3_ARATH PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1
Length = 217
Score = 267 bits (682), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 150/200 (75%), Positives = 169/200 (84%), Gaps = 4/200 (2%)
Query: 1 MATPATLPISNPQTNTTTTTTQTQAPIATPAFRAFLSRLSSSIRYGFSQRRHWSELVDRT 60
MA P TLPIS+ + +Q+Q P++TPAFR FLSRLSSSIR SQRR W ELVDR+
Sbjct: 2 MANPPTLPISD----HSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRS 57
Query: 61 AMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYL 120
A+SRP+SL +AYSRIR+NL YFKVNYVT++ LVLA SLLSHPFSLLVLLCL AWIFLYL
Sbjct: 58 AISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYL 117
Query: 121 FRPSDQPVVLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRV 180
FRPSDQP+V+ GRTFSDRETLG LV+LTIVVVFLTSVGSLL SALM+G IVC HGAFRV
Sbjct: 118 FRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRV 177
Query: 181 PEDLFLDEQEPINSGFLSFL 200
PEDLFLD+QEP N+G LSFL
Sbjct: 178 PEDLFLDDQEPANTGLLSFL 197
>sp|Q9SIY7|PR1B2_ARATH PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1
Length = 213
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/201 (69%), Positives = 166/201 (82%), Gaps = 5/201 (2%)
Query: 2 ATPATLPISNPQTNTTTTTTQTQAPIATPAFRAFLSRLSSSIRYGFSQRRHWSELVDRTA 61
++PA LP++N Q TQ+Q PI + AFR FLSRLSSS+R SQRR W ELVDR++
Sbjct: 3 SSPAILPVTNQQA-----ATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSS 57
Query: 62 MSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYLF 121
+RPDSL +++SRIRKNL+YFKVNY ++ LVLAFSLLSHPFSLLVLL LLG+W+FLYLF
Sbjct: 58 FARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLF 117
Query: 122 RPSDQPVVLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRVP 181
R SDQP+VLFGR+FSDRETL LV+ TIVVVF+TSVGSLL SAL +G AIVC HGAFRVP
Sbjct: 118 RSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVP 177
Query: 182 EDLFLDEQEPINSGFLSFLGG 202
+DLFLDEQEP N+G LSF+G
Sbjct: 178 DDLFLDEQEPANAGLLSFIGN 198
>sp|Q9M012|PR1B5_ARATH PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1
Length = 223
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 155/206 (75%), Gaps = 12/206 (5%)
Query: 3 TPATLPISNPQTNTTTTTTQTQAPIAT-------PAFRAFLSRLSSSIRYGFSQRRHWSE 55
P LPIS TT T T Q PI T P RAF++ ++ ++ G S+ R WSE
Sbjct: 5 NPPVLPIS-----TTATDTTNQPPIVTAVVESQPPVVRAFVNGVTETVCGGLSRSRPWSE 59
Query: 56 LVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLCLLGAW 115
L+DR+A ++PDSL+EA +R RKN SYF+VNYV ++ L+L FSLL+HPFSL++LLCL +W
Sbjct: 60 LLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASW 119
Query: 116 IFLYLFRPSDQPVVLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAH 175
+FLYLFRPSD+P++LFGR+FS+ ETLG L++ TI V+F TSVGS+LISALM+G A +C H
Sbjct: 120 LFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVH 179
Query: 176 GAFRVPEDLFLDEQEPINSGFLSFLG 201
GAFR P+DLFLDEQ+ SGFLSF+G
Sbjct: 180 GAFRAPDDLFLDEQDHAASGFLSFIG 205
>sp|Q9LYQ4|PR1B6_ARATH PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1
Length = 216
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 135/183 (73%), Gaps = 4/183 (2%)
Query: 18 TTTTQTQAPIATP----AFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYS 73
T+TT Q P P + R LSR+ +++R+ + R W+ELVDR+A SRP SL+EA S
Sbjct: 8 TSTTPDQLPGGDPQLLSSLRVLLSRVLATVRHASADARPWAELVDRSAFSRPPSLSEATS 67
Query: 74 RIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPVVLFGR 133
R+RKN SYF+ NY+TL+ ++LA SLL+HPF+L +L L +W+FLY FRP+DQP+V+ GR
Sbjct: 68 RVRKNFSYFRANYITLVAILLAASLLTHPFALFLLASLAASWLFLYFFRPADQPLVIGGR 127
Query: 134 TFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQEPIN 193
TFSD ETLG L + T+VV+F+TSVGSLL+S L VG V HGAFR PEDLFL+EQE I
Sbjct: 128 TFSDLETLGILCLSTVVVMFMTSVGSLLMSTLAVGIMGVAIHGAFRAPEDLFLEEQEAIG 187
Query: 194 SGF 196
SG
Sbjct: 188 SGL 190
>sp|Q9C889|PR1F2_ARATH PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1
Length = 189
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 35 FLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVL 94
++SR I+ G + RR W + D +M+ P +A SRI+ NL YF+ NY + +L
Sbjct: 21 YISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFIL 80
Query: 95 AFSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPVVLFGRTFSDRETLGALVVLTIVVVFL 154
SLL HP SL+VL L+ WIFLY R D+P+V+FG DR L L VLT+V++ L
Sbjct: 81 FLSLLYHPTSLIVLSILVVFWIFLYFLR--DEPLVVFGYQIDDRTVLIGLSVLTVVMLLL 138
Query: 155 TSVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQ 189
T S ++ +L+ A +V H A R ++LFLDE+
Sbjct: 139 THATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEE 173
>sp|Q9LIC7|PR1F4_ARATH PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1
Length = 188
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 99/176 (56%), Gaps = 6/176 (3%)
Query: 15 NTTTTTTQTQAPIATPAF-RAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYS 73
N TT + A +PA +SR I+ G + RR W + D + P +++ +S
Sbjct: 3 NNDEITTSSHA---SPAVNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFS 59
Query: 74 RIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPVVLFGR 133
RI+ NL+YF+ NY ++ V+ FSL+ HP SL+V L+ WIFLY R D P+ +F
Sbjct: 60 RIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLR--DVPLKVFRF 117
Query: 134 TFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQ 189
DR L L V+TIV++ LT+ +++ALM GA +V H R +DLFLDE+
Sbjct: 118 QIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEE 173
>sp|Q9LIC6|PR1F3_ARATH PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1
Length = 188
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 36 LSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLA 95
LSR I+ G + RR W + D +M P +++A++RI+ NL+YF++NY ++ +V+
Sbjct: 22 LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIF 81
Query: 96 FSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPVVLFGRTFSDRETLGALVVLTIVVVFLT 155
FSL+ HP SL+V L+ WIFLY R D+P+ LF DR L L VLT+V++ LT
Sbjct: 82 FSLIWHPTSLIVFTVLVVVWIFLYFLR--DEPIKLFRFQIDDRTVLIVLSVLTVVLLLLT 139
Query: 156 SVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQ 189
+ ++ AL+ GA +V H R EDLFLDE+
Sbjct: 140 NATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEE 173
>sp|Q9FRR1|PRA1E_ARATH PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1
Length = 209
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 87/148 (58%)
Query: 51 RHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLC 110
R W E++D +A+S P EA + ++ N+SYF+ NY + ++ L+ HP S++ +
Sbjct: 48 RPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIV 107
Query: 111 LLGAWIFLYLFRPSDQPVVLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAA 170
+ WI LY R ++ +V+ G+ D+ L L ++T++ + T VG ++ +L++G
Sbjct: 108 VFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLL 167
Query: 171 IVCAHGAFRVPEDLFLDEQEPINSGFLS 198
IV AHGAFR +DLFLDE+ G +S
Sbjct: 168 IVGAHGAFRNTDDLFLDEESARRGGLVS 195
>sp|P93829|PRA1D_ARATH PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1
Length = 182
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
Query: 51 RHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLC 110
R W + +D +A S P S+A+A +R+ +NL++F++NY +L ++L +L++ P ++L +
Sbjct: 21 RPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLITRPIAILAFIA 80
Query: 111 LLGAWIFLYLFRPSDQPVVLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAA 170
+ AW FLY R ++P+ +FG T D L+ L+I + T V ++ + G
Sbjct: 81 VGLAWFFLYFAR--EEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRALTTVGFGVL 138
Query: 171 IVCAHGAFRVPEDLFLDEQEPINSGFLSFLGGAASAA 207
++ H A R +DL D+ E LS GG A
Sbjct: 139 VLILHAALRGTDDLVSDDLESPYGPMLSTSGGGNDGA 175
>sp|Q9FZ63|PR1F1_ARATH PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1
Length = 180
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Query: 16 TTTTTTQTQAPIATPAFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRI 75
TT T Q + P ++ R G + RR W +++D + + P LA +RI
Sbjct: 2 TTYGTNQKSSNDLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITRI 61
Query: 76 RKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPVVLFGRTF 135
R N YF+ NY ++ + SL+ +PFSLLVLL LLGAW+FLY R D+P+ +F R
Sbjct: 62 RANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLR--DEPLTVFDREI 119
Query: 136 SDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQE 190
R L + V+T+ ++FLT + A++ GA V +H A R EDLF ++E
Sbjct: 120 DHRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEE 174
>sp|Q9FH16|PR1G2_ARATH PRA1 family protein G2 OS=Arabidopsis thaliana GN=PRA1G2 PE=2 SV=1
Length = 186
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 3/163 (1%)
Query: 36 LSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLA 95
+SR ++ S R WSEL+ S P+S + R + N +YF VNY ++ A
Sbjct: 21 VSRSIHNLTTAISSHRPWSELIFSGDFSLPESFSSLLLRSKTNFNYFFVNYTIIVSTCAA 80
Query: 96 FSLLS-HPFSLLVLLCLLGAWIFLYLFRPSDQPVVLFGRTFSDRETLGALVVLTIVVVFL 154
F+L++ P +L+V+ ++ W+ + FR + P++L+ DR L LV+ ++ ++
Sbjct: 81 FALITASPVALIVVGAIIALWLIFHFFR--EDPLILWSFQVGDRTVLLFLVLASVWAIWF 138
Query: 155 TSVGSLLISALMVGAAIVCAHGAFRVPEDLFLDEQEPINSGFL 197
T+ L + VG + H FR ++LFL+E + IN G +
Sbjct: 139 TNSAVNLAVGVSVGLLLCIIHAVFRNSDELFLEEDDAINGGLI 181
>sp|Q9ZWD1|PR1G1_ARATH PRA1 family protein G1 OS=Arabidopsis thaliana GN=PRA1G1 PE=2 SV=1
Length = 187
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Query: 48 SQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLV 107
S R WSE + ++ RP S + A SR++ NL +F VNYV L + L+ P +L+
Sbjct: 36 SYRPWWSEFLAFGSIDRPSSFSPAVSRVKLNLHHFAVNYVLLTAASITLFLIGDPMALVT 95
Query: 108 LLCLLGAWIFLYLFRPSDQPVVLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMV 167
+ + W+ LY +R D P+VL+GR SDR + L++ ++ ++ + LI ++
Sbjct: 96 VASFVAMWLLLYFYR--DHPLVLYGRHISDRVIVFGLILGSLWALWFINSLQCLILGVVT 153
Query: 168 GAAIVCAHGAFRVPEDLFLDEQE-PINSGFLSF 199
+ H R +DLF+ E++ + S FL +
Sbjct: 154 SVLLCLVHAIIRNSDDLFVQEKDVVVPSNFLHW 186
>sp|Q9UI14|PRAF1_HUMAN Prenylated Rab acceptor protein 1 OS=Homo sapiens GN=RABAC1 PE=1
SV=1
Length = 185
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 10 SNPQTNTTTTTTQTQAPIATPAFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLA 69
+ + + TT I + A R +L R ++IR WS VD+ SRP +L
Sbjct: 9 KDAEAEGLSGTTLLPKLIPSGAGREWLERRRATIR-------PWSTFVDQQRFSRPRNLG 61
Query: 70 EAYSRIRKNLSYFKVNYV-TLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPV 128
E R+ +N+ Y++ NYV LGL+L + +++ P L+ L GA LYL R + +
Sbjct: 62 ELCQRLVRNVEYYQSNYVFVFLGLIL-YCVVTSPMLLVALAVFFGACYILYL-RTLESKL 119
Query: 129 VLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRVPEDLFLDE 188
VLFGR S ++ +L GS + L ++ +H AF E + +E
Sbjct: 120 VLFGREVSPAHQYALAGGISFPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 179
Query: 189 --QEPI 192
EP+
Sbjct: 180 LQMEPV 185
>sp|Q52NJ0|PRAF1_PIG Prenylated Rab acceptor protein 1 OS=Sus scrofa GN=RABAC1 PE=2 SV=1
Length = 185
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 10 SNPQTNTTTTTTQTQAPIATPAFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLA 69
+ + + TT I + A R +L R ++IR W VD+ SRP +L
Sbjct: 9 KDAEAEGLSATTLLPKLIPSGAGREWLERRRATIR-------PWGSFVDQRRFSRPRNLG 61
Query: 70 EAYSRIRKNLSYFKVNYV-TLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPV 128
E R+ +N+ Y++ NYV LGL+L + +++ P L+ L GA LYL R
Sbjct: 62 ELCQRLVRNVEYYQSNYVFVFLGLIL-YCVVTSPMLLVALAVFFGACYILYL-RTLQSKF 119
Query: 129 VLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRVPEDLFLDE 188
VLFGR S ++ +L GS + L ++ +H AF E + +E
Sbjct: 120 VLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEE 179
Query: 189 --QEPI 192
EP+
Sbjct: 180 LQMEPV 185
>sp|Q8HY39|PRAF1_CANFA Prenylated Rab acceptor protein 1 OS=Canis familiaris GN=RABAC1
PE=2 SV=1
Length = 185
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 10 SNPQTNTTTTTTQTQAPIATPAFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLA 69
+ + + TT I + A R L R ++IR WS VD+ SRP +L
Sbjct: 9 KDAEPEGLSATTLLPKLIPSGAGRERLERRRATIR-------PWSSFVDQRRFSRPRNLG 61
Query: 70 EAYSRIRKNLSYFKVNYV-TLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPV 128
E R+ +N+ Y++ NYV LGL+L + +++ P L+ L GA LYL R
Sbjct: 62 ELCQRLVRNVEYYQSNYVFVFLGLIL-YCVVTSPMLLVALAVFFGACYILYL-RTLQSKF 119
Query: 129 VLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRVPEDLFLDE 188
VLFGR S ++ +L GS + L ++ +H AF E + +E
Sbjct: 120 VLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQMEAVDGEE 179
Query: 189 --QEPI 192
EP+
Sbjct: 180 LQMEPV 185
>sp|O35394|PRAF1_RAT Prenylated Rab acceptor protein 1 OS=Rattus norvegicus GN=Rabac1
PE=1 SV=1
Length = 185
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 10 SNPQTNTTTTTTQTQAPIATPAFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLA 69
+ + + TT I + A R +L R ++IR W VD+ SRP ++
Sbjct: 9 KDAEVEGLSATTLLPKLIPSGAGREWLERRRATIR-------PWGTFVDQQRFSRPRNVG 61
Query: 70 EAYSRIRKNLSYFKVNYV-TLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPV 128
E R+ +N+ Y++ NYV LGL+L + +++ P L+ L GA LYL R +
Sbjct: 62 ELCQRLVRNVEYYQSNYVFVFLGLIL-YCVVTSPMLLVALAVFFGACYILYL-RTLQSKL 119
Query: 129 VLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRV--PEDLFL 186
VLFGR S ++ +L GS + L ++ +H AF P D
Sbjct: 120 VLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVFWVLGATLVLIGSHAAFHQIEPADGEE 179
Query: 187 DEQEPI 192
+ EP+
Sbjct: 180 LQMEPV 185
>sp|Q9Z0S9|PRAF1_MOUSE Prenylated Rab acceptor protein 1 OS=Mus musculus GN=Rabac1 PE=1
SV=1
Length = 185
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 10 SNPQTNTTTTTTQTQAPIATPAFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLA 69
+ + + TT I + A R +L R ++IR W VD+ SRP ++
Sbjct: 9 KDAEGEGLSATTLLPKLIPSGAGREWLERRRATIR-------PWGTFVDQQRFSRPRNVG 61
Query: 70 EAYSRIRKNLSYFKVNYV-TLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPV 128
E R+ +N+ Y++ NYV LGL+L + +++ P L+ L GA LYL R +
Sbjct: 62 ELCQRLVRNVEYYQSNYVFVFLGLIL-YCVVTSPMLLVALAVFFGACYILYL-RTLQSKL 119
Query: 129 VLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRV--PEDLFL 186
VLFGR S ++ +L GS + L ++ +H AF P D
Sbjct: 120 VLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVFWVLGATLVLIGSHAAFHQMEPADGEE 179
Query: 187 DEQEPI 192
+ EP+
Sbjct: 180 LQMEPV 185
>sp|Q1RMH4|PRAF1_BOVIN Prenylated Rab acceptor protein 1 OS=Bos taurus GN=RABAC1 PE=2 SV=1
Length = 185
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 27 IATPAFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNY 86
I + A R +L R ++IR W VD+ SRP +L E R+ +N+ Y++ NY
Sbjct: 26 IPSGAGREWLERRRATIR-------SWGSFVDQRRFSRPRNLGELCQRLVRNVEYYQSNY 78
Query: 87 V-TLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPVVLFGRTFSDRETLGALV 145
V LGL+L + + + P L+ L GA LYL R VLFGR S
Sbjct: 79 VFVFLGLIL-YCVATSPMLLVALAVFFGACYILYL-RTLQSKFVLFGREVSPAHQYALAG 136
Query: 146 VLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRVPEDLFLDE--QEPI 192
++ +L GS + L ++ +H AF E + +E EP+
Sbjct: 137 GVSFPFFWLAGAGSAVFWVLGATLVVIGSHAAFHQIEAVDGEELQMEPV 185
>sp|Q1G3K7|PRA1C_ARATH PRA1 family protein C OS=Arabidopsis thaliana GN=PRA1C PE=2 SV=1
Length = 127
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 82 FKVNYVTLLGLVLAFSLLSHPFSLLVLLCLLGAWIFLYLFRPSDQPVVLFGRTFSDRETL 141
F+ NY+ + + + S+L P L V + L+ AW LY++ ++P V+FG D +
Sbjct: 3 FRTNYIVIFIVSIFISMLWQPVHLSVFVILIVAW--LYVYSRDNEPWVIFGSVIDDSTLV 60
Query: 142 GALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAFRVPEDLFL---DEQEPI 192
L+VLTI + LT V ++ ++ G +V HG R ++ D++E +
Sbjct: 61 LVLLVLTIGIFLLTDVSRGIVIGVLAGLPVVLVHGMCRRNTEMLFVLEDDEEKV 114
>sp|Q8LFP1|PRA1H_ARATH PRA1 family protein H OS=Arabidopsis thaliana GN=PRA1H PE=2 SV=1
Length = 241
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 61 AMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLCLLGAW-IFLY 119
+ S P S +A R+ +N+ F NY TL + A +L P +L+ LL L W +F Y
Sbjct: 114 SYSFPSSSQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKY 173
Query: 120 LFRPSDQPVVLFGRTFSDRE-TLGALVVLTIVVVFLTSVGSLLISALMVGAAIVCAHGAF 178
SD+ F R S R+ ++G T V++ +V L SAL + +++ H F
Sbjct: 174 C---SDK--WKFDRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGF 228
Query: 179 R 179
R
Sbjct: 229 R 229
>sp|Q9UUN5|PRA1_SCHPO PRA1-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPCC306.02c PE=2 SV=1
Length = 171
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 55 ELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHP 102
E +D +SRP + +EA SRI N S F NY+ ++ +++ ++L+ +P
Sbjct: 34 EFLDVRRISRPRNFSEAQSRISFNFSRFSSNYLAIIAMLVIYALIRNP 81
>sp|Q54NS7|PRAFB_DICDI PRA1 family protein 2 OS=Dictyostelium discoideum GN=prafB PE=3
SV=2
Length = 158
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 12/132 (9%)
Query: 53 WSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLCLL 112
W++ ++ S P S A +R+ NL+++ NY+ ++ +VL +L ++ +LLV + LL
Sbjct: 12 WNDFIEWGRYSIPGS-QNAITRMEDNLNFYSGNYIAIVAVVLLITLFTN-MNLLVAILLL 69
Query: 113 GAWIFLYLF--RPSDQPVVLFGRTFSDRETLGALVVLTI--VVVFLTSVGSLLISALMVG 168
GA I YLF + D+ + F+ + +V+L + V+V G L +V
Sbjct: 70 GA-IGYYLFFVQKGDKNI-----GFAVLTPMIQMVILGVVSVIVIYKLSGLTLFYTTLVS 123
Query: 169 AAIVCAHGAFRV 180
V AH A ++
Sbjct: 124 LLFVLAHSALKM 135
>sp|Q8W115|PR1A3_ARATH PRA1 family protein A3 OS=Arabidopsis thaliana GN=PRA1A3 PE=2 SV=1
Length = 209
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 65 PDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLL 106
P S ++ SR++ NL Y++ NY L VL +L++ P ++L
Sbjct: 37 PRSFSKWMSRLKCNLYYYRTNYFILFVFVLGLALITRPLAIL 78
>sp|Q8GWC3|PR1A2_ARATH PRA1 family protein A2 OS=Arabidopsis thaliana GN=PRA1A2 PE=2 SV=1
Length = 209
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 51 RHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLL 106
R + E R A P S ++ SR++ NL Y++ NY L+ VL +L++ P +L+
Sbjct: 25 RSFGEFFSRFAF--PRSFSKWKSRLKCNLYYYRTNYFILVIFVLGLALVTRPLALV 78
>sp|P53633|PRA1_YEAST Prenylated Rab acceptor 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YIP3 PE=1 SV=2
Length = 176
Score = 34.7 bits (78), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 51 RHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSLLVLLC 110
R E + +S+P + E SR+ NL YF NY ++G + ++LL++ L V++
Sbjct: 37 RTPQEFFNFKKISKPQNFGEVQSRVAYNLKYFSSNYGLIIGCLSIYTLLTNLLLLFVIVL 96
Query: 111 LLGAWIFLYLFRPSDQPVVLFGRTFSDRETLGALVVLTIVVVFLTSVGSLLISALMVGAA 170
++ + + + ++ V FG +F + LV + + + FL S S L+ + A
Sbjct: 97 VVAGIVGINKLK-GEELVTPFG-SFKTNQLYTGLVCVAVPIGFLASPISTLLWLIGASAV 154
Query: 171 IVCAHGAF-RVPEDLFLDEQ 189
V H + P + DE+
Sbjct: 155 SVFGHASLMEKPIETVFDEE 174
>sp|Q28K03|PUR9_JANSC Bifunctional purine biosynthesis protein PurH OS=Jannaschia sp.
(strain CCS1) GN=purH PE=3 SV=1
Length = 532
Score = 34.3 bits (77), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 25 APIATPAFRAFLSRLSSSIRYGFSQRRHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKV 84
A I TP RAF L+ +RYG + + + +D + SRP +A A K LSY +
Sbjct: 202 AEIKTPPHRAFAGSLAQEMRYGENPHQKAAFYLDGS--SRP-GVATAQQHQGKALSYNNI 258
Query: 85 NYVTLLGLVLAFSLLSH 101
N AF L+S
Sbjct: 259 NDTD-----AAFELVSE 270
>sp|Q9LZM7|PR1A1_ARATH PRA1 family protein A1 OS=Arabidopsis thaliana GN=PRA1A1 PE=2 SV=1
Length = 209
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 26/41 (63%)
Query: 65 PDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSL 105
P S+ + SR++ NL Y++ NY ++ ++L +L+ P ++
Sbjct: 37 PKSVPKWDSRLKCNLYYYRTNYFIMIVVILGLGVLTRPLAI 77
>sp|Q54XK1|PRAFA_DICDI PRA1 family protein 1 OS=Dictyostelium discoideum GN=prafA PE=3
SV=1
Length = 235
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 51 RHWSELVDRTAMSRPDSLAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPF 103
R W V ++ + SRI++N+ YF+ NY+ L F ++++PF
Sbjct: 101 RDWRSFVGSRQQYGLPNIKDTTSRIKENVVYFQSNYLILFLCFSVFFIITNPF 153
>sp|Q8SQU5|YBD4_ENCCU ABC transporter-like protein ECU11_1340 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ECU11_1340 PE=1 SV=1
Length = 582
Score = 30.4 bits (67), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 84 VNYVTLLGLVLAFSLLS--HPFSLLVLLCLLGAWIFLYLFRPSDQPVVLFGRTFS 136
+ Y G++ AF L+S H F VL+ LG + LFR P+ G+ F+
Sbjct: 417 LKYCIFFGIIYAFGLISMDHAFLGQVLMYTLGGTVSSMLFRSMASPLSTLGKVFN 471
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,507,514
Number of Sequences: 539616
Number of extensions: 2633213
Number of successful extensions: 15223
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 15141
Number of HSP's gapped (non-prelim): 63
length of query: 215
length of database: 191,569,459
effective HSP length: 113
effective length of query: 102
effective length of database: 130,592,851
effective search space: 13320470802
effective search space used: 13320470802
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)