Query 046013
Match_columns 215
No_of_seqs 116 out of 444
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 13:35:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046013.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046013hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kf6c_ f.21.2.2 (C:) Fumarate 54.2 15 0.0011 26.6 6.1 47 97-143 61-111 (130)
2 d1h9aa1 c.2.1.3 (A:1-181,A:413 15.8 73 0.0053 23.6 4.2 47 31-77 50-101 (195)
3 d2ftxb1 d.300.1.2 (B:155-213) 15.6 27 0.002 21.8 1.2 8 80-87 46-53 (59)
4 d1kq8a_ a.4.5.14 (A:) HFH-1 (H 14.1 26 0.0019 22.6 0.9 20 67-86 18-37 (75)
5 d2q7ra1 f.56.1.1 (A:1-139) Ara 11.3 2.4E+02 0.017 19.5 10.4 43 63-105 40-83 (139)
6 d1d5va_ a.4.5.14 (A:) Adipocyt 10.8 50 0.0036 22.0 1.6 20 67-86 26-45 (94)
7 d2axia1 a.42.1.1 (A:25-109) MD 10.1 35 0.0026 22.7 0.5 28 51-79 56-83 (85)
8 d2hdca_ a.4.5.14 (A:) Genesis 10.0 75 0.0054 21.2 2.3 21 67-87 24-44 (97)
9 d2r6gf1 e.70.1.1 (F:13-260) Ma 9.5 3.5E+02 0.025 20.5 6.7 21 101-121 27-47 (248)
10 d1ttva_ a.42.1.1 (A:) MDM2 {Af 8.8 53 0.0039 22.6 1.1 28 51-79 64-91 (107)
No 1
>d1kf6c_ f.21.2.2 (C:) Fumarate reductase subunit FrdC {Escherichia coli [TaxId: 562]}
Probab=54.23 E-value=15 Score=26.58 Aligned_cols=47 Identities=13% Similarity=0.329 Sum_probs=25.7
Q ss_pred HHHHhhHHHHHHHHHHHHHHH----hhhccCCCCCeeecceecchHHHHHH
Q 046013 97 SLLSHPFSLLVLLCLLGAWIF----LYLFRPSDQPVVLFGRTFSDRETLGA 143 (215)
Q Consensus 97 ~ll~~P~~Ll~l~~l~~~w~~----l~~~r~~~~~~~i~gr~~~~~~~~~~ 143 (215)
..+.||+.++.=++.+++..+ .+.+-++--++.+.|+.++++.+..+
T Consensus 61 ~flqnP~vv~lniiaLaa~L~Ha~TwF~l~Pk~m~i~v~~~~~~~~~iv~~ 111 (130)
T d1kf6c_ 61 DFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDEKMGPEPIIKS 111 (130)
T ss_dssp HHHTSSHHHHHHHHHHHHHHHHHHHHHHHGGGGCCCBSSSSBCCSHHHHHH
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhhcCccCChHHHHHH
Confidence 456788877763333333221 12222333467778888887765443
No 2
>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}
Probab=15.75 E-value=73 Score=23.60 Aligned_cols=47 Identities=13% Similarity=0.101 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHhhcCCCCCChhHhhcC-----CCCCCCCCHHHHHHHHHH
Q 046013 31 AFRAFLSRLSSSIRYGFSQRRHWSELVDR-----TAMSRPDSLAEAYSRIRK 77 (215)
Q Consensus 31 ~~~~~~s~~~~~~~~~l~~~RPW~EF~d~-----~~fs~P~s~~ea~~Ri~~ 77 (215)
...+|...+++.++........|.+|+++ ..++.|.++.++.+++..
T Consensus 50 ~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~l~~ 101 (195)
T d1h9aa1 50 NDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAHDVTDAASYAVLKEAIEE 101 (195)
T ss_dssp CHHHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEECCTTCTTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhccchHhhHHHHhhccceeeEeeccHhhHHHHHHHHHH
Confidence 34678888888988776665568999865 468889999998888864
No 3
>d2ftxb1 d.300.1.2 (B:155-213) Kinetochore protein Spc24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=15.57 E-value=27 Score=21.78 Aligned_cols=8 Identities=25% Similarity=1.065 Sum_probs=6.9
Q ss_pred hhHHHHHH
Q 046013 80 SYFKVNYV 87 (215)
Q Consensus 80 ~yF~~NY~ 87 (215)
.||.+||+
T Consensus 46 ~fF~tnYi 53 (59)
T d2ftxb1 46 DFYKTKYI 53 (59)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 68999996
No 4
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=14.11 E-value=26 Score=22.59 Aligned_cols=20 Identities=25% Similarity=0.519 Sum_probs=13.0
Q ss_pred CHHHHHHHHHHhHhhHHHHH
Q 046013 67 SLAEAYSRIRKNLSYFKVNY 86 (215)
Q Consensus 67 s~~ea~~Ri~~NL~yF~~NY 86 (215)
+++|..+-|.+|..||+.++
T Consensus 18 tL~eIy~~i~~~fpy~r~~~ 37 (75)
T d1kq8a_ 18 TLAEINEYLMGKFPFFRGSY 37 (75)
T ss_dssp CHHHHHHHHHHHCTTGGGTC
T ss_pred cHHHHHHHHHHhCcccccCC
Confidence 56666677777776666543
No 5
>d2q7ra1 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-activating protein, FLAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.27 E-value=2.4e+02 Score=19.48 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=28.2
Q ss_pred CCCCC-HHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHhhHHH
Q 046013 63 SRPDS-LAEAYSRIRKNLSYFKVNYVTLLGLVLAFSLLSHPFSL 105 (215)
Q Consensus 63 s~P~s-~~ea~~Ri~~NL~yF~~NY~li~~~l~~~~ll~~P~~L 105 (215)
+.|+. -++-.+|..+--..+-.|+-+..+.+.+..+..+|...
T Consensus 40 ~~p~~~g~~~f~ra~RaH~N~~E~~p~~L~~l~~~~l~~~~~~a 83 (139)
T d2q7ra1 40 RSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLLCSQVPA 83 (139)
T ss_dssp SSCCSCCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSCHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhhhHhhHHHHHHHHHHHHhccCHHHH
Confidence 44542 23446677776677777887777777777776778643
No 6
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.77 E-value=50 Score=22.02 Aligned_cols=20 Identities=20% Similarity=0.444 Sum_probs=15.6
Q ss_pred CHHHHHHHHHHhHhhHHHHH
Q 046013 67 SLAEAYSRIRKNLSYFKVNY 86 (215)
Q Consensus 67 s~~ea~~Ri~~NL~yF~~NY 86 (215)
+++|..+-|..|..||+.++
T Consensus 26 tL~eIY~~i~~~fpyfr~~~ 45 (94)
T d1d5va_ 26 TLNGIYQFIMDRFPFYRENK 45 (94)
T ss_dssp CHHHHHHHHHHHCTHHHHCC
T ss_pred cHHHHHHHHHHHCCccCccc
Confidence 77788888888888887654
No 7
>d2axia1 a.42.1.1 (A:25-109) MDM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.13 E-value=35 Score=22.68 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=24.0
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHhH
Q 046013 51 RHWSELVDRTAMSRPDSLAEAYSRIRKNL 79 (215)
Q Consensus 51 RPW~EF~d~~~fs~P~s~~ea~~Ri~~NL 79 (215)
-+..|.|..++||. ++..++..++++||
T Consensus 56 D~LG~l~gv~sFsV-k~~r~l~~ml~rnL 83 (85)
T d2axia1 56 DLLGDLFGVPSFSV-KEHRKIYTMIYRNL 83 (85)
T ss_dssp SHHHHHHSSSEEET-TCHHHHHHHHHTTE
T ss_pred chHHhhcCCCceee-cCcHHHHHHHHhcc
Confidence 46789999999998 55889999999997
No 8
>d2hdca_ a.4.5.14 (A:) Genesis {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=10.03 E-value=75 Score=21.16 Aligned_cols=21 Identities=14% Similarity=0.423 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHhHhhHHHHHH
Q 046013 67 SLAEAYSRIRKNLSYFKVNYV 87 (215)
Q Consensus 67 s~~ea~~Ri~~NL~yF~~NY~ 87 (215)
+++|..+-|..|..||+.++-
T Consensus 24 tL~eIY~~i~~~fpyfr~~~~ 44 (97)
T d2hdca_ 24 TLSGICEFISNRFPYYREKFP 44 (97)
T ss_dssp CHHHHHHHHHHHCHHHHHHCS
T ss_pred cHHHHHHHHHHhCccccCCCC
Confidence 788999999999999988763
No 9
>d2r6gf1 e.70.1.1 (F:13-260) Maltose transport system permease protein MalF {Escherichia coli [TaxId: 562]}
Probab=9.50 E-value=3.5e+02 Score=20.52 Aligned_cols=21 Identities=14% Similarity=0.191 Sum_probs=11.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhc
Q 046013 101 HPFSLLVLLCLLGAWIFLYLF 121 (215)
Q Consensus 101 ~P~~Ll~l~~l~~~w~~l~~~ 121 (215)
+....+.++++.++..|+|+.
T Consensus 27 ~~~~a~~~~~~~~~~~~vy~s 47 (248)
T d2r6gf1 27 EYLFAITTLILSSAGLYIFAN 47 (248)
T ss_dssp CHHHHHHHHHHHHHHHHHHSS
T ss_pred hHHHHHHHHHHHHheEEEEEc
Confidence 444444455555555666654
No 10
>d1ttva_ a.42.1.1 (A:) MDM2 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=8.80 E-value=53 Score=22.61 Aligned_cols=28 Identities=25% Similarity=0.302 Sum_probs=24.0
Q ss_pred CChhHhhcCCCCCCCCCHHHHHHHHHHhH
Q 046013 51 RHWSELVDRTAMSRPDSLAEAYSRIRKNL 79 (215)
Q Consensus 51 RPW~EF~d~~~fs~P~s~~ea~~Ri~~NL 79 (215)
-+..|.|+.++||. ++..++..++++|+
T Consensus 64 D~LG~llgv~sFsV-ke~r~l~~ml~rnL 91 (107)
T d1ttva_ 64 DPLGELFGVQEFSV-KEHRRIYAMISRNL 91 (107)
T ss_dssp CHHHHHHTCSCEET-TCHHHHHHHHHTTE
T ss_pred chHHhhcCCCceee-cCcHHHHHHHHhhh
Confidence 45789999999998 56889999999997
Done!