Your job contains 1 sequence.
>046016
MSASQRIVFCAFTLTHSRAFCLRRSSTSSLRCYLPLARARSLTFTSSVSPIMSYNQRRGG
HSQQLWKQKPVTDTPSSAVEGVSSSGAEAVTNGISGLSIAENDGQSSVPSTGFGSFQLPN
QSPTQGQKAIWKPKSYGTVSGQTSAEVGNLPADDTATAIKGNASEMTTAQKSRMDLSKLF
RGNLLENFTVDNSTYSLAEVRATFYPKFENEKSDQEIRMRMIEVVSNGLAAVEVTLKHSG
SLFMYAGHKGGAYAKNSFGNVYTAVGVFVLGRMLREAWGAQALKKQVEFNDFLEKNRMCI
SMELVTAVLGDHGQRPREDYAVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFS
TRKSVTSFFAAYDALCEEGTATSVCKALDDVADISVPGSKDHIQVQGEILEGLVARIVSH
ECSQHMEEVLRDYPPPPVEGAGLDLGPSLREICAANRSDEKQQIKALLQSVGSSFCPDHS
DWFGVEAGGTHSRNADRSVLTKFLHAHPADFSTTKLQEMIRLMRDKRFPAAFKIYHNFHK
IDSVSNDNLFYKMVIHVHSDSVFRRYQKEMRHRPGLWPLYRGFFVDINLFKANKERDAEI
ARNNNLEKTVSGNGGVSGTDGLANEDENLMIKLKFLTYKLRTFLIRNGLSTLFKDGPSAY
KAYYLRQMNIWGTSAVKQRQLSKMLDEWAVYIRRKYGNKQLSSSVYLTEAEPFLEQYARR
SPENQVLIGSAGNLVRVEEFLAVIEGGRDEEGDLETEREAPPSSPRQAKDEVQKDEGLIV
FFPGIPGCAKSALCKELLNAPGGLGDNRPIHTLMGDLTKGKYWQKVADERRRKPYSVMLA
DKNAPNEEVWRQIEDMCRRTRASAVPVVPDSGGTESNPFSLDALAVFMFRVLERVNHPGN
LDKNSPNAGYVLLMFYHLYEGKSRKEFDGELVERFGSLIKMPLLKDDRSPLPDHVRSVLE
EGISWYKLHTSKHGRLESTKGSYAQEWAKWEKQMRETLFGNADYLQSIQVPFESAVKQVL
EQLKLIAKGEYKAPSTEKRNFGTIVFAAVSLPVTEIQSLLVELAGKDPTIDLFFKEDLER
NLKKAHVTLAHKRSHGVTAVASYGPYVNRNVP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046016
(1112 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2205085 - symbol:RNL "RNAligase" species:3702 ... 3772 0. 1
>TAIR|locus:2205085 [details] [associations]
symbol:RNL "RNAligase" species:3702 "Arabidopsis
thaliana" [GO:0003972 "RNA ligase (ATP) activity" evidence=IEA;IGI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006388 "tRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IEA;IDA;TAS] [GO:0004113
"2',3'-cyclic-nucleotide 3'-phosphodiesterase activity"
evidence=IGI] [GO:0051731 "polynucleotide 5'-hydroxyl-kinase
activity" evidence=IGI] InterPro:IPR015965 Pfam:PF08302
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003746
GO:GO:0006388 GO:GO:0004113 GO:GO:0051731 GO:GO:0003972
EMBL:AK230326 IPI:IPI00543960 RefSeq:NP_001154320.1
RefSeq:NP_172269.2 UniGene:At.42282 PaxDb:Q0WL81 PRIDE:Q0WL81
EnsemblPlants:AT1G07910.1 EnsemblPlants:AT1G07910.2 GeneID:837306
KEGG:ath:AT1G07910 TAIR:At1g07910 eggNOG:NOG246904
HOGENOM:HOG000084476 InParanoid:Q0WL81 OMA:EICAANR PhylomeDB:Q0WL81
ProtClustDB:CLSN2696602 Genevestigator:Q0WL81 Uniprot:Q0WL81
Length = 1104
Score = 3772 (1332.9 bits), Expect = 0., P = 0.
Identities = 727/1047 (69%), Positives = 852/1047 (81%)
Query: 73 DTPXXXXXXXXXXXXXXXTNGISGLSIAENDGQSSVPSTGFGSFQLPNQSPTQG--QKAI 130
D P N GLS+ E++ + V LP+Q+ + Q +
Sbjct: 2 DAPFESGDSSATVVAEAVNNQFGGLSLKESNTNAPV---------LPSQTTSNHRVQNLV 52
Query: 131 WKPKSYGTVSGQTSA-EVGNLPADDTATAIKGNASEMTTAQKSRMDLSKLFRGNLLENFT 189
WKPKSYGTVSG +SA EVG A + I G++ + K ++LSK+F GNLLE F+
Sbjct: 53 WKPKSYGTVSGSSSATEVGKTSA---VSQI-GSSGDT----KVGLNLSKIFGGNLLEKFS 104
Query: 190 VDNSTYSLAEVRATFYPKFENEKSDQEIRMRMIEVVSNGLAAVEVTLKHSGSLFMYAGHK 249
VD STY A++RATFYPKFENEK+DQEIR RMIE+VS GLA +EV+LKHSGSLFMYAGHK
Sbjct: 105 VDKSTYCHAQIRATFYPKFENEKTDQEIRTRMIEMVSKGLATLEVSLKHSGSLFMYAGHK 164
Query: 250 GGAYAKNSFGNVYTAVGVFVLGRMLREAWGAQALKKQVEFNDFLEKNRMCISMELVTAVL 309
GGAYAKNSFGN+YTAVGVFVL RM REAWG +A KK+ EFNDFLEKNRMCISMELVTAVL
Sbjct: 165 GGAYAKNSFGNIYTAVGVFVLSRMFREAWGTKAPKKEAEFNDFLEKNRMCISMELVTAVL 224
Query: 310 GDHGQRPREDYAVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSVTSFF 369
GDHGQRP +DY VVTAVTELGNGKP+FYST EII+FCRKWRLPTNHVWLFSTRKSVTSFF
Sbjct: 225 GDHGQRPLDDYVVVTAVTELGNGKPQFYSTSEIISFCRKWRLPTNHVWLFSTRKSVTSFF 284
Query: 370 AAYDALCEEGTATSVCKALDDVADISVPGSKDHIQVQGEILEGLVARIVSHECSQHMEEV 429
AA+DALCEEG ATSVC+ALD+VADISVP SKDH++VQGEILEGLVARIVS + S+ ME V
Sbjct: 285 AAFDALCEEGIATSVCRALDEVADISVPASKDHVKVQGEILEGLVARIVSSQSSRDMENV 344
Query: 430 LRDYPPPPVEGAGLDLGPSLREICAANRSDEKQQIKALLQSVGSSFCPDHSDWFGVEAGG 489
LRD+PPPP +GA LDLG SLREICAA+RS+EKQQ++ALL+SVG SFCP +WFG E+
Sbjct: 345 LRDHPPPPCDGANLDLGLSLREICAAHRSNEKQQMRALLRSVGPSFCPSDVEWFGDES-- 402
Query: 490 THSRNADRSVLTKFLHAHPADFSTTKLQEMIRLMRDKRFPAAFKIYHNFHKIDSVSNDNL 549
H ++AD+SV+TKFL + PAD+ST+KLQEM+RLM++KR PAAFK YHNFH+ + +S DNL
Sbjct: 403 -HPKSADKSVITKFLQSQPADYSTSKLQEMVRLMKEKRLPAAFKCYHNFHRAEDISPDNL 461
Query: 550 FYKMVIHVHSDSVFRRYQKEMRHRPGLWPLYRGFFVDINLFKANKERDAEIARNNNLEKT 609
FYK+V+HVHSDS FRRY KEMRH P LWPLYRGFFVDINLFK+NK RD ++ +
Sbjct: 462 FYKLVVHVHSDSGFRRYHKEMRHMPSLWPLYRGFFVDINLFKSNKGRDLMALKSID---N 518
Query: 610 VSGNGGVSGTDGLANEDENLMIKLKFLTYKLRTFLIRNGLSTLFKDGPSAYKAYYLRQMN 669
S N G DGLA++D NLMIK+KFLTYKLRTFLIRNGLS LFKDG +AYK YYLRQM
Sbjct: 519 ASENDGRGEKDGLADDDANLMIKMKFLTYKLRTFLIRNGLSILFKDGAAAYKTYYLRQMK 578
Query: 670 IWGTSAVKQRQLSKMLDEWAVYIRRKYGNKQLSSSVYLTEAEPFLEQYARRSPENQVLIG 729
IWGTS KQ++L KMLDEWA YIRRK GN QLSSS YL+EAEPFLEQYA+RSP+N +LIG
Sbjct: 579 IWGTSDGKQKELCKMLDEWAAYIRRKCGNDQLSSSTYLSEAEPFLEQYAKRSPKNHILIG 638
Query: 730 SAGNLVRVEEFLAVIEGGRDEEGDLETEREAPPSSPRQA-KDEVQKDEGLIVFFPGIPGC 788
SAGNLVR E+FLA+++G DEEGDL ++ P++P A K+ VQKDEGLIVFFPGIPG
Sbjct: 639 SAGNLVRTEDFLAIVDGDLDEEGDLVKKQGVTPATPEPAVKEAVQKDEGLIVFFPGIPGS 698
Query: 789 AKSALCKELLNAPGGLGDNRPIHTLMGDLTKGKYWQKVADERRRKPYSVMLADKNAPNEE 848
AKSALCKELLNAPGG GD+RP+HTLMGDL KGKYW KVADERR+KP S+MLADKNAPNE+
Sbjct: 699 AKSALCKELLNAPGGFGDDRPVHTLMGDLVKGKYWPKVADERRKKPQSIMLADKNAPNED 758
Query: 849 VWRQIEDMCRRTRASAVPVVPDSGGTESNPFSLDALAVFMFRVLERVNHPGNLDKNSPNA 908
VWRQIEDMCRRTRASAVP+V DS GT++NP+SLDALAVFMFRVL+RVNHPG LDK S NA
Sbjct: 759 VWRQIEDMCRRTRASAVPIVADSEGTDTNPYSLDALAVFMFRVLQRVNHPGKLDKESSNA 818
Query: 909 GYVLLMFYHLYEGKSRKEFDGELVERFGSLIKMPLLKDDRSPLPDHVRSVLEEGISWYKL 968
GYVLLMFYHLYEGK+R EF+ EL+ERFGSLIKMPLLK DR+PLPD V+SVLEEGI + L
Sbjct: 819 GYVLLMFYHLYEGKNRNEFESELIERFGSLIKMPLLKSDRTPLPDPVKSVLEEGIDLFNL 878
Query: 969 HTSKHGRLESTKGSYAQEWAKWEKQMRETLFGNADYLQSIQVPFESAVKQVLEQLKLIAK 1028
H+ +HGRLESTKG+YA EW KWEKQ+R+TL N++YL SIQVPFES V QV E+LK IAK
Sbjct: 879 HSRRHGRLESTKGTYAAEWTKWEKQLRDTLVANSEYLSSIQVPFESMVHQVREELKTIAK 938
Query: 1029 GEYKAPSTEKRNFGTIVFAAVSLPVTEIQSLLVELAGKDPTIDLFF---KEDLERNLKKA 1085
G+YK PS+EKR G+IVFAA++LP T++ SLL +LA +PT+ F K+ ++ L+++
Sbjct: 939 GDYKPPSSEKRKHGSIVFAAINLPATQVHSLLEKLAAANPTMRSFLEGKKKSIQEKLERS 998
Query: 1086 HVTLAHKRSHGVTAVASYGPYVNRNVP 1112
HVTLAHKRSHGV VASY ++NR VP
Sbjct: 999 HVTLAHKRSHGVATVASYSQHLNREVP 1025
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1112 1087 0.00086 123 3 11 22 0.41 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 631 (67 KB)
Total size of DFA: 503 KB (2233 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 97.55u 0.14s 97.69t Elapsed: 00:00:05
Total cpu time: 97.55u 0.14s 97.69t Elapsed: 00:00:05
Start: Fri May 10 15:39:36 2013 End: Fri May 10 15:39:41 2013