Query 046018
Match_columns 310
No_of_seqs 154 out of 1730
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 13:42:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046018.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046018hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 1.2E-28 4.2E-33 215.1 26.6 266 12-307 24-311 (322)
2 3sre_A PON1, serum paraoxonase 99.9 5.9E-25 2E-29 192.3 25.7 230 47-307 112-355 (355)
3 3g4e_A Regucalcin; six bladed 99.9 5.9E-24 2E-28 183.3 21.0 238 8-261 14-260 (297)
4 3e5z_A Putative gluconolactona 99.9 6.9E-22 2.4E-26 169.9 25.4 202 7-214 28-235 (296)
5 3dr2_A Exported gluconolactona 99.9 2.1E-22 7.1E-27 174.2 19.2 203 6-214 44-256 (305)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 3.8E-20 1.3E-24 159.8 24.9 205 9-219 20-248 (314)
7 2ghs_A AGR_C_1268P; regucalcin 99.9 3.6E-20 1.2E-24 161.7 22.0 220 9-250 51-278 (326)
8 3fvz_A Peptidyl-glycine alpha- 99.8 2.3E-18 7.7E-23 150.4 26.1 234 43-307 20-320 (329)
9 2p4o_A Hypothetical protein; p 99.8 1.1E-18 3.9E-23 150.8 22.3 211 11-252 36-264 (306)
10 4hw6_A Hypothetical protein, I 99.8 8.1E-18 2.8E-22 152.2 25.2 250 10-307 142-431 (433)
11 3v64_C Agrin; beta propeller, 99.8 1.1E-17 3.9E-22 147.2 25.2 169 27-219 53-226 (349)
12 3v65_B Low-density lipoprotein 99.8 2.2E-17 7.5E-22 147.4 25.9 169 27-219 96-269 (386)
13 1ijq_A LDL receptor, low-densi 99.8 3.4E-17 1.2E-21 142.3 25.9 151 45-219 28-187 (316)
14 2dg1_A DRP35, lactonase; beta 99.8 7.4E-18 2.5E-22 146.9 21.8 211 11-241 49-272 (333)
15 1rwi_B Serine/threonine-protei 99.8 6.6E-18 2.2E-22 142.6 20.7 228 12-307 29-262 (270)
16 2qc5_A Streptogramin B lactona 99.8 6.2E-17 2.1E-21 138.3 26.8 257 11-307 22-298 (300)
17 3v64_C Agrin; beta propeller, 99.8 3.8E-18 1.3E-22 150.3 18.7 201 10-239 76-283 (349)
18 1npe_A Nidogen, entactin; glyc 99.8 5.9E-17 2E-21 137.1 25.4 196 46-307 35-236 (267)
19 2z2n_A Virginiamycin B lyase; 99.8 1.3E-16 4.6E-21 136.1 27.5 260 10-308 16-294 (299)
20 3tc9_A Hypothetical hydrolase; 99.8 4.3E-17 1.5E-21 147.4 25.1 234 11-307 141-428 (430)
21 3sov_A LRP-6, low-density lipo 99.8 3.9E-18 1.3E-22 148.1 17.6 202 9-239 37-246 (318)
22 3v65_B Low-density lipoprotein 99.8 5.3E-18 1.8E-22 151.4 17.2 202 10-240 119-327 (386)
23 1q7f_A NHL, brain tumor CG1071 99.8 1.2E-16 4.2E-21 136.1 25.0 221 21-307 44-278 (286)
24 3hrp_A Uncharacterized protein 99.8 8.5E-17 2.9E-21 144.7 25.0 235 21-307 146-408 (409)
25 1ijq_A LDL receptor, low-densi 99.8 2.2E-17 7.4E-22 143.5 19.6 199 10-237 33-244 (316)
26 1npe_A Nidogen, entactin; glyc 99.8 3E-17 1E-21 138.9 19.9 202 11-240 40-247 (267)
27 3p5b_L Low density lipoprotein 99.8 2.7E-16 9.1E-21 141.0 25.4 219 27-307 92-318 (400)
28 4a2l_A BT_4663, two-component 99.8 2.2E-16 7.5E-21 153.6 25.5 266 6-307 354-657 (795)
29 3m0c_C LDL receptor, low-densi 99.8 2.6E-16 8.9E-21 151.5 25.5 218 28-308 405-631 (791)
30 3sov_A LRP-6, low-density lipo 99.7 4.5E-16 1.5E-20 135.1 23.9 150 46-219 34-189 (318)
31 3p5b_L Low density lipoprotein 99.7 1E-16 3.4E-21 143.7 20.0 200 10-238 115-327 (400)
32 3v9f_A Two-component system se 99.7 2.2E-16 7.4E-21 153.3 23.3 266 6-307 310-609 (781)
33 2z2n_A Virginiamycin B lyase; 99.7 2.9E-15 1E-19 127.8 27.6 224 47-307 15-253 (299)
34 2qc5_A Streptogramin B lactona 99.7 4.3E-15 1.5E-19 126.7 27.4 225 46-307 19-258 (300)
35 2qe8_A Uncharacterized protein 99.7 4.9E-16 1.7E-20 136.4 22.0 170 46-235 66-282 (343)
36 3kya_A Putative phosphatase; s 99.7 4.8E-16 1.6E-20 141.1 21.9 245 46-308 138-474 (496)
37 3v9f_A Two-component system se 99.7 1.2E-16 4E-21 155.2 19.1 263 6-307 360-654 (781)
38 4a0p_A LRP6, LRP-6, low-densit 99.7 3.1E-16 1E-20 147.9 20.3 191 5-219 35-229 (628)
39 3s94_A LRP-6, low-density lipo 99.7 2.7E-15 9.1E-20 141.4 26.1 187 9-219 42-235 (619)
40 4a2l_A BT_4663, two-component 99.7 4.6E-15 1.6E-19 144.3 27.9 265 6-307 307-612 (795)
41 4a0p_A LRP6, LRP-6, low-densit 99.7 3.5E-15 1.2E-19 140.8 26.0 196 47-308 37-236 (628)
42 1rwi_B Serine/threonine-protei 99.7 3E-15 1E-19 126.2 22.8 153 48-233 25-181 (270)
43 3dsm_A Uncharacterized protein 99.7 1.2E-15 4.2E-20 133.1 20.9 222 47-307 44-300 (328)
44 1q7f_A NHL, brain tumor CG1071 99.7 4.9E-15 1.7E-19 126.2 23.3 167 46-239 29-201 (286)
45 3dsm_A Uncharacterized protein 99.7 1.8E-15 6.3E-20 131.9 20.5 196 21-239 98-309 (328)
46 1n7d_A LDL receptor, low-densi 99.7 1.3E-16 4.6E-21 152.4 12.1 208 12-248 411-631 (699)
47 1n7d_A LDL receptor, low-densi 99.7 6.6E-16 2.3E-20 147.6 16.5 168 29-219 388-563 (699)
48 3s94_A LRP-6, low-density lipo 99.7 1.1E-14 3.9E-19 137.1 23.5 154 43-219 36-194 (619)
49 3m0c_C LDL receptor, low-densi 99.7 3.7E-15 1.3E-19 143.5 19.6 184 12-219 429-624 (791)
50 3fvz_A Peptidyl-glycine alpha- 99.7 8.8E-15 3E-19 127.6 19.2 167 47-238 91-284 (329)
51 3hrp_A Uncharacterized protein 99.6 1.5E-13 5E-18 123.5 27.3 148 45-219 129-290 (409)
52 3tc9_A Hypothetical hydrolase; 99.6 7.5E-15 2.6E-19 132.7 18.2 152 46-219 136-293 (430)
53 3g4e_A Regucalcin; six bladed 99.6 2.4E-13 8.2E-18 116.7 26.4 212 47-298 13-262 (297)
54 4hw6_A Hypothetical protein, I 99.6 1.4E-14 4.8E-19 131.0 18.2 154 46-219 138-296 (433)
55 2fp8_A Strictosidine synthase; 99.6 5.5E-14 1.9E-18 122.1 21.1 150 46-219 18-208 (322)
56 3e5z_A Putative gluconolactona 99.6 2.4E-13 8.3E-18 116.3 24.1 227 40-308 21-285 (296)
57 3dr2_A Exported gluconolactona 99.6 3.3E-13 1.1E-17 116.3 24.0 221 42-307 40-304 (305)
58 2iwa_A Glutamine cyclotransfer 99.6 4.4E-13 1.5E-17 112.4 23.8 164 48-241 22-191 (266)
59 3u4y_A Uncharacterized protein 99.6 8.1E-13 2.8E-17 114.4 26.3 234 47-308 41-303 (331)
60 2dg1_A DRP35, lactonase; beta 99.6 3.6E-13 1.2E-17 117.0 23.9 233 47-307 45-314 (333)
61 3vgz_A Uncharacterized protein 99.6 5.2E-12 1.8E-16 110.1 29.4 190 27-241 69-272 (353)
62 3hfq_A Uncharacterized protein 99.5 2.1E-12 7.1E-17 112.8 24.1 152 47-219 40-210 (347)
63 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 8E-13 2.7E-17 113.6 20.6 154 40-219 11-199 (314)
64 3vgz_A Uncharacterized protein 99.5 1.8E-11 6E-16 106.7 28.9 227 46-307 40-301 (353)
65 3hxj_A Pyrrolo-quinoline quino 99.5 2.8E-12 9.4E-17 111.0 22.6 235 21-305 74-320 (330)
66 1l0q_A Surface layer protein; 99.5 1.6E-10 5.5E-15 102.3 32.2 249 4-307 7-273 (391)
67 3a9g_A Putative uncharacterize 99.5 3.9E-12 1.3E-16 112.0 21.4 168 46-219 72-288 (354)
68 2ism_A Putative oxidoreductase 99.5 9.3E-12 3.2E-16 109.5 23.7 162 42-219 26-225 (352)
69 3ott_A Two-component system se 99.5 1.4E-12 4.9E-17 126.1 19.6 184 6-216 370-577 (758)
70 3ott_A Two-component system se 99.5 2.2E-12 7.4E-17 124.8 19.9 261 8-308 323-625 (758)
71 2qe8_A Uncharacterized protein 99.5 4.7E-12 1.6E-16 110.9 19.9 232 47-302 17-314 (343)
72 2p4o_A Hypothetical protein; p 99.5 7.8E-12 2.7E-16 107.7 20.7 214 47-298 32-278 (306)
73 1ri6_A Putative isomerase YBHE 99.5 1.4E-10 4.6E-15 100.4 28.6 152 47-219 38-201 (343)
74 2ghs_A AGR_C_1268P; regucalcin 99.5 3.3E-11 1.1E-15 104.7 24.2 212 47-299 49-293 (326)
75 3a9g_A Putative uncharacterize 99.4 3.1E-11 1.1E-15 106.1 23.1 160 44-218 26-219 (354)
76 3hfq_A Uncharacterized protein 99.4 2E-10 6.8E-15 100.2 28.1 155 46-219 85-263 (347)
77 3scy_A Hypothetical bacterial 99.4 2.9E-11 9.8E-16 106.2 22.1 153 47-219 155-329 (361)
78 3u4y_A Uncharacterized protein 99.4 5.5E-11 1.9E-15 102.8 22.7 167 28-219 63-244 (331)
79 3bws_A Protein LP49; two-domai 99.4 3.5E-10 1.2E-14 101.4 28.6 163 47-239 170-342 (433)
80 3no2_A Uncharacterized protein 99.4 1.4E-10 4.9E-15 98.3 24.4 219 58-307 4-251 (276)
81 2p9w_A MAL S 1 allergenic prot 99.4 5.5E-12 1.9E-16 107.9 15.4 188 11-218 17-256 (334)
82 3kya_A Putative phosphatase; s 99.4 3.5E-11 1.2E-15 109.3 21.5 200 10-237 142-415 (496)
83 1jmx_B Amine dehydrogenase; ox 99.4 1.6E-10 5.4E-15 100.3 24.0 163 50-240 3-184 (349)
84 3hxj_A Pyrrolo-quinoline quino 99.4 9.2E-12 3.1E-16 107.7 16.0 239 21-307 34-282 (330)
85 1l0q_A Surface layer protein; 99.4 3.1E-10 1.1E-14 100.4 25.0 184 27-240 54-242 (391)
86 1nir_A Nitrite reductase; hemo 99.4 7.5E-10 2.6E-14 102.9 28.4 166 48-240 180-364 (543)
87 2ism_A Putative oxidoreductase 99.4 1E-10 3.4E-15 102.9 20.4 167 46-219 74-289 (352)
88 1jof_A Carboxy-CIS,CIS-muconat 99.3 1.9E-10 6.7E-15 101.3 22.0 153 47-217 83-276 (365)
89 3das_A Putative oxidoreductase 99.3 8.5E-10 2.9E-14 96.0 25.4 159 42-218 27-223 (347)
90 3nol_A Glutamine cyclotransfer 99.3 8.6E-10 3E-14 91.5 23.8 160 50-241 46-211 (262)
91 3scy_A Hypothetical bacterial 99.3 2.7E-09 9.1E-14 93.5 27.4 152 46-219 49-234 (361)
92 3nok_A Glutaminyl cyclase; bet 99.3 2.8E-10 9.7E-15 94.4 19.0 159 50-241 58-220 (268)
93 3mbr_X Glutamine cyclotransfer 99.3 1.6E-09 5.5E-14 89.1 22.7 162 48-241 22-189 (243)
94 3no2_A Uncharacterized protein 99.3 6.4E-09 2.2E-13 88.2 26.9 185 3-239 9-203 (276)
95 3qqz_A Putative uncharacterize 99.3 9.1E-09 3.1E-13 85.6 27.1 199 46-307 26-251 (255)
96 3bws_A Protein LP49; two-domai 99.3 1.8E-09 6.3E-14 96.7 24.7 153 47-217 212-366 (433)
97 1nir_A Nitrite reductase; hemo 99.3 9.6E-10 3.3E-14 102.2 23.2 151 46-216 221-390 (543)
98 1ri6_A Putative isomerase YBHE 99.3 6.3E-09 2.2E-13 89.8 26.9 153 47-219 84-254 (343)
99 3qqz_A Putative uncharacterize 99.3 3.1E-10 1E-14 94.6 17.3 190 11-217 31-244 (255)
100 2p9w_A MAL S 1 allergenic prot 99.2 6.3E-10 2.2E-14 95.2 18.5 163 46-219 12-207 (334)
101 1pby_B Quinohemoprotein amine 99.2 1.4E-08 4.7E-13 87.4 25.8 179 2-213 4-191 (337)
102 2g8s_A Glucose/sorbosone dehyd 99.2 3E-10 1E-14 99.8 14.5 162 44-217 15-218 (353)
103 2oiz_A Aromatic amine dehydrog 99.2 2.3E-08 7.8E-13 88.0 26.2 65 47-112 51-127 (361)
104 2iwa_A Glutamine cyclotransfer 99.2 5.9E-09 2E-13 87.3 20.6 152 93-307 21-179 (266)
105 1cru_A Protein (soluble quinop 99.2 1.6E-09 5.5E-14 98.3 17.8 168 43-217 23-248 (454)
106 3das_A Putative oxidoreductase 99.2 8.7E-09 3E-13 89.6 21.6 166 46-219 79-284 (347)
107 3c75_H MADH, methylamine dehyd 99.2 5.4E-09 1.9E-13 93.6 20.8 101 28-145 100-213 (426)
108 2g8s_A Glucose/sorbosone dehyd 99.1 4.2E-09 1.5E-13 92.5 19.6 129 46-179 65-227 (353)
109 1pby_B Quinohemoprotein amine 99.1 6.2E-08 2.1E-12 83.2 25.4 150 61-240 3-172 (337)
110 2mad_H Methylamine dehydrogena 99.1 1.9E-08 6.6E-13 88.9 21.2 74 157-237 272-356 (373)
111 2ymu_A WD-40 repeat protein; u 99.1 6.8E-08 2.3E-12 89.7 25.7 222 47-305 345-576 (577)
112 1jof_A Carboxy-CIS,CIS-muconat 99.1 1.2E-08 4.2E-13 89.7 19.4 153 47-219 145-333 (365)
113 3sre_A PON1, serum paraoxonase 99.1 4.9E-08 1.7E-12 85.2 22.6 157 43-219 46-244 (355)
114 3mbr_X Glutamine cyclotransfer 99.1 6.2E-08 2.1E-12 79.6 21.8 154 92-307 20-177 (243)
115 1qks_A Cytochrome CD1 nitrite 99.1 1.3E-07 4.6E-12 88.0 26.6 167 46-240 196-382 (567)
116 3ow8_A WD repeat-containing pr 99.1 1.8E-07 6.1E-12 80.8 25.6 146 48-219 124-271 (321)
117 4g56_B MGC81050 protein; prote 99.0 6E-08 2E-12 85.1 22.3 154 47-219 95-250 (357)
118 3ow8_A WD repeat-containing pr 99.0 8.8E-07 3E-11 76.4 29.4 161 47-238 81-244 (321)
119 1gxr_A ESG1, transducin-like e 99.0 2.2E-06 7.6E-11 73.3 31.2 148 47-219 98-247 (337)
120 1fwx_A Nitrous oxide reductase 99.0 1.2E-08 4.2E-13 93.9 17.4 169 47-220 134-354 (595)
121 3sjl_D Methylamine dehydrogena 99.0 1.3E-08 4.3E-13 89.8 16.7 124 98-241 38-179 (386)
122 3q6k_A 43.2 kDa salivary prote 99.0 1.5E-07 5.2E-12 82.5 23.2 156 46-219 86-298 (381)
123 3c75_H MADH, methylamine dehyd 99.0 1.1E-08 3.9E-13 91.6 16.2 180 102-307 82-293 (426)
124 2mad_H Methylamine dehydrogena 99.0 9.7E-08 3.3E-12 84.4 21.9 122 98-241 26-167 (373)
125 2ymu_A WD-40 repeat protein; u 99.0 4E-07 1.4E-11 84.5 27.2 160 47-239 263-423 (577)
126 3nol_A Glutamine cyclotransfer 99.0 8.9E-08 3.1E-12 79.4 20.1 154 94-307 44-199 (262)
127 1gxr_A ESG1, transducin-like e 99.0 7.8E-07 2.7E-11 76.2 27.2 146 47-219 142-288 (337)
128 2ece_A 462AA long hypothetical 99.0 2.3E-08 7.9E-13 89.1 17.4 147 51-214 192-399 (462)
129 1mda_H Methylamine dehydrogena 99.0 1.7E-08 5.7E-13 88.9 16.4 187 45-241 64-356 (368)
130 3sjl_D Methylamine dehydrogena 99.0 1.4E-07 4.7E-12 83.2 22.2 132 28-176 60-212 (386)
131 4gqb_B Methylosome protein 50; 99.0 2.4E-07 8.1E-12 81.0 22.6 149 47-219 128-281 (344)
132 4ery_A WD repeat-containing pr 98.9 1.1E-06 3.9E-11 74.9 26.3 161 47-238 66-230 (312)
133 2hqs_A Protein TOLB; TOLB, PAL 98.9 8.2E-08 2.8E-12 86.1 19.6 146 47-217 223-375 (415)
134 1cru_A Protein (soluble quinop 98.9 3.5E-08 1.2E-12 89.5 17.1 109 92-218 26-165 (454)
135 1jmx_B Amine dehydrogenase; ox 98.9 2.9E-08 9.8E-13 85.9 15.6 77 153-241 256-335 (349)
136 2ojh_A Uncharacterized protein 98.9 1.5E-07 5E-12 79.0 19.2 147 47-215 42-192 (297)
137 1qks_A Cytochrome CD1 nitrite 98.9 5.6E-07 1.9E-11 83.8 24.7 184 14-217 204-410 (567)
138 2hqs_A Protein TOLB; TOLB, PAL 98.9 4.3E-07 1.5E-11 81.4 23.1 144 47-214 179-328 (415)
139 4gqb_B Methylosome protein 50; 98.9 3.6E-07 1.2E-11 79.8 22.0 166 48-239 84-254 (344)
140 2ece_A 462AA long hypothetical 98.9 3.3E-07 1.1E-11 81.7 21.2 186 47-241 138-365 (462)
141 3nok_A Glutaminyl cyclase; bet 98.9 1.5E-07 5.1E-12 78.1 17.6 148 94-307 56-208 (268)
142 3zwl_B Eukaryotic translation 98.9 5.1E-06 1.7E-10 71.9 28.1 167 47-239 75-257 (369)
143 4e54_B DNA damage-binding prot 98.9 9.9E-07 3.4E-11 79.3 23.9 177 23-219 138-319 (435)
144 3ei3_B DNA damage-binding prot 98.8 4.5E-06 1.5E-10 73.3 27.1 153 47-219 119-274 (383)
145 1k8k_C P40, ARP2/3 complex 41 98.8 3.5E-06 1.2E-10 73.3 25.7 167 47-240 53-242 (372)
146 1got_B GT-beta; complex (GTP-b 98.8 8.7E-06 3E-10 70.5 27.9 148 47-219 98-249 (340)
147 2oiz_A Aromatic amine dehydrog 98.8 1.5E-07 5.1E-12 82.8 16.0 138 60-209 213-360 (361)
148 3q7m_A Lipoprotein YFGL, BAMB; 98.8 2.3E-06 7.9E-11 75.2 23.6 209 58-307 143-376 (376)
149 1k8k_C P40, ARP2/3 complex 41 98.8 7.3E-06 2.5E-10 71.2 26.4 151 47-219 9-165 (372)
150 3vl1_A 26S proteasome regulato 98.8 3.5E-06 1.2E-10 74.8 24.4 224 52-307 103-363 (420)
151 2vdu_B TRNA (guanine-N(7)-)-me 98.8 1.7E-06 5.9E-11 78.0 22.6 108 94-219 104-221 (450)
152 1got_B GT-beta; complex (GTP-b 98.8 2.5E-06 8.5E-11 74.0 22.7 146 48-219 145-293 (340)
153 2ynn_A Coatomer subunit beta'; 98.8 1.4E-05 4.9E-10 68.0 26.6 161 48-239 57-225 (304)
154 1r5m_A SIR4-interacting protei 98.8 2.2E-05 7.5E-10 69.3 28.7 145 47-219 109-270 (425)
155 3frx_A Guanine nucleotide-bind 98.7 2.4E-05 8.2E-10 67.1 27.6 162 47-238 66-234 (319)
156 3o4h_A Acylamino-acid-releasin 98.7 2.9E-07 9.8E-12 86.0 16.5 144 51-219 114-268 (582)
157 1vyh_C Platelet-activating fac 98.7 6.1E-06 2.1E-10 73.6 24.4 113 47-183 151-265 (410)
158 2pm9_A Protein WEB1, protein t 98.7 1.7E-06 5.8E-11 76.6 20.7 180 47-251 114-314 (416)
159 4aez_A CDC20, WD repeat-contai 98.7 3.3E-06 1.1E-10 74.9 22.3 153 47-219 218-372 (401)
160 2ecf_A Dipeptidyl peptidase IV 98.7 1.1E-06 3.9E-11 84.2 20.6 97 49-171 111-228 (741)
161 3zwl_B Eukaryotic translation 98.7 2.3E-05 8E-10 67.7 27.0 149 47-219 33-198 (369)
162 2z3z_A Dipeptidyl aminopeptida 98.7 5.4E-06 1.9E-10 79.0 24.7 140 48-216 83-278 (706)
163 4h5i_A Guanine nucleotide-exch 98.7 4E-05 1.4E-09 67.2 28.0 184 48-271 135-330 (365)
164 1erj_A Transcriptional repress 98.7 5.4E-05 1.8E-09 66.9 29.0 145 49-219 126-279 (393)
165 1vyh_C Platelet-activating fac 98.7 1E-05 3.5E-10 72.1 24.4 147 47-219 109-257 (410)
166 1mda_H Methylamine dehydrogena 98.7 4E-07 1.4E-11 80.1 14.0 80 133-216 47-144 (368)
167 3s25_A Hypothetical 7-bladed b 98.7 7E-06 2.4E-10 70.2 21.4 175 53-306 110-290 (302)
168 3dm0_A Maltose-binding peripla 98.7 3.2E-05 1.1E-09 73.7 28.4 163 47-238 431-599 (694)
169 2ojh_A Uncharacterized protein 98.7 4.5E-06 1.5E-10 69.7 20.0 145 47-216 85-237 (297)
170 3frx_A Guanine nucleotide-bind 98.6 3.1E-05 1.1E-09 66.4 25.5 144 47-218 108-259 (319)
171 1fwx_A Nitrous oxide reductase 98.6 3.7E-06 1.3E-10 77.6 20.4 111 58-173 101-216 (595)
172 3q7m_A Lipoprotein YFGL, BAMB; 98.6 9.8E-06 3.3E-10 71.2 22.6 211 58-307 103-335 (376)
173 4ery_A WD repeat-containing pr 98.6 1.4E-05 4.7E-10 68.1 22.9 147 47-219 24-172 (312)
174 2xzm_R RACK1; ribosome, transl 98.6 2.9E-05 9.9E-10 67.2 25.1 148 47-218 119-277 (343)
175 4g56_B MGC81050 protein; prote 98.6 2E-06 6.8E-11 75.3 17.6 149 47-219 140-293 (357)
176 2pbi_B Guanine nucleotide-bind 98.6 4.7E-05 1.6E-09 66.4 26.4 146 48-219 156-307 (354)
177 1r5m_A SIR4-interacting protei 98.6 7.2E-06 2.5E-10 72.4 21.4 187 25-240 128-328 (425)
178 3mkq_A Coatomer beta'-subunit; 98.6 1.1E-05 3.7E-10 78.0 24.0 162 47-239 56-225 (814)
179 2ecf_A Dipeptidyl peptidase IV 98.6 7.1E-06 2.4E-10 78.6 22.5 203 12-218 114-358 (741)
180 3azo_A Aminopeptidase; POP fam 98.6 4.1E-06 1.4E-10 79.3 20.4 155 56-218 88-263 (662)
181 2ynn_A Coatomer subunit beta'; 98.6 2.5E-05 8.5E-10 66.5 23.4 149 46-219 13-164 (304)
182 1pgu_A Actin interacting prote 98.6 3.4E-05 1.2E-09 71.8 26.1 235 47-307 64-326 (615)
183 3jrp_A Fusion protein of prote 98.6 7.3E-05 2.5E-09 64.8 26.5 152 46-219 11-183 (379)
184 4a9v_A PHOX; hydrolase, beta-p 98.6 6.1E-07 2.1E-11 81.9 13.1 120 45-171 382-550 (592)
185 3mkq_A Coatomer beta'-subunit; 98.6 1.6E-05 5.5E-10 76.8 23.9 150 45-219 12-164 (814)
186 4aez_A CDC20, WD repeat-contai 98.6 0.00021 7.1E-09 63.2 29.2 160 47-239 135-301 (401)
187 3lrv_A PRE-mRNA-splicing facto 98.6 9.3E-06 3.2E-10 70.4 19.8 145 48-216 127-280 (343)
188 3k26_A Polycomb protein EED; W 98.6 2.7E-05 9.1E-10 67.3 22.8 113 47-183 70-192 (366)
189 3fm0_A Protein CIAO1; WDR39,SG 98.6 9.6E-06 3.3E-10 70.5 19.9 151 47-219 62-217 (345)
190 1sq9_A Antiviral protein SKI8; 98.6 4E-05 1.4E-09 67.3 24.0 165 47-240 63-276 (397)
191 1erj_A Transcriptional repress 98.6 4.7E-05 1.6E-09 67.3 24.4 164 47-238 65-245 (393)
192 2aq5_A Coronin-1A; WD40 repeat 98.5 7.4E-06 2.5E-10 72.6 19.2 147 47-215 132-286 (402)
193 2pbi_B Guanine nucleotide-bind 98.5 2.2E-05 7.5E-10 68.5 21.7 146 48-218 198-348 (354)
194 3iz6_a 40S ribosomal protein R 98.5 2.5E-05 8.4E-10 68.8 21.8 147 48-219 207-367 (380)
195 2xyi_A Probable histone-bindin 98.5 2.1E-05 7.1E-10 70.5 21.6 152 47-219 182-345 (430)
196 1xfd_A DIP, dipeptidyl aminope 98.5 1.2E-05 4E-10 76.8 20.4 100 49-170 63-191 (723)
197 2aq5_A Coronin-1A; WD40 repeat 98.5 9.9E-06 3.4E-10 71.7 18.6 147 47-212 177-329 (402)
198 2z3z_A Dipeptidyl aminopeptida 98.5 2.8E-05 9.6E-10 74.1 23.0 149 47-216 258-420 (706)
199 4a11_B DNA excision repair pro 98.5 0.00016 5.6E-09 63.3 26.4 149 47-219 100-268 (408)
200 3pe7_A Oligogalacturonate lyas 98.5 3.1E-05 1.1E-09 67.9 21.6 159 51-215 85-257 (388)
201 3fm0_A Protein CIAO1; WDR39,SG 98.5 3.7E-05 1.3E-09 66.7 21.7 149 48-219 18-173 (345)
202 2vdu_B TRNA (guanine-N(7)-)-me 98.5 7.3E-05 2.5E-09 67.2 24.3 162 48-239 104-279 (450)
203 3ei3_B DNA damage-binding prot 98.5 7.4E-05 2.5E-09 65.4 23.7 148 47-219 74-228 (383)
204 2xzm_R RACK1; ribosome, transl 98.5 0.00014 4.9E-09 62.8 25.2 147 47-219 77-236 (343)
205 3lrv_A PRE-mRNA-splicing facto 98.5 0.00052 1.8E-08 59.2 30.2 179 2-217 51-235 (343)
206 4h5i_A Guanine nucleotide-exch 98.5 1.4E-05 4.9E-10 70.1 18.5 150 47-219 177-335 (365)
207 3dwl_C Actin-related protein 2 98.5 8E-06 2.7E-10 71.4 16.7 151 47-219 56-228 (377)
208 3vl1_A 26S proteasome regulato 98.4 1.4E-05 5E-10 70.7 18.4 147 47-219 140-314 (420)
209 3v7d_B Cell division control p 98.4 0.0002 7E-09 64.3 26.1 173 47-250 163-360 (464)
210 3dwl_C Actin-related protein 2 98.4 9E-06 3.1E-10 71.0 16.7 151 47-219 12-169 (377)
211 2pm9_A Protein WEB1, protein t 98.4 9.4E-06 3.2E-10 71.7 16.8 167 47-240 13-206 (416)
212 1sq9_A Antiviral protein SKI8; 98.4 3.8E-05 1.3E-09 67.4 20.1 150 47-219 122-314 (397)
213 3i2n_A WD repeat-containing pr 98.4 2.7E-05 9.1E-10 67.1 18.7 147 53-219 124-283 (357)
214 2xyi_A Probable histone-bindin 98.4 1.5E-05 5E-10 71.5 17.2 152 47-219 232-402 (430)
215 3q6k_A 43.2 kDa salivary prote 98.4 5.3E-05 1.8E-09 66.4 20.0 154 48-218 153-345 (381)
216 2hes_X YDR267CP; beta-propelle 98.4 0.00017 5.8E-09 62.0 23.2 151 47-219 15-176 (330)
217 1pgu_A Actin interacting prote 98.4 6.6E-05 2.3E-09 69.8 21.8 162 47-240 19-201 (615)
218 3dm0_A Maltose-binding peripla 98.4 0.00017 5.7E-09 68.7 24.7 146 47-218 473-624 (694)
219 3odt_A Protein DOA1; ubiquitin 98.4 0.00036 1.2E-08 58.7 24.4 221 47-307 60-294 (313)
220 3sfz_A APAF-1, apoptotic pepti 98.4 0.00025 8.4E-09 72.0 27.2 112 48-182 800-912 (1249)
221 2hes_X YDR267CP; beta-propelle 98.3 0.0006 2E-08 58.6 25.7 148 47-219 59-222 (330)
222 1nr0_A Actin interacting prote 98.3 0.00017 5.8E-09 67.7 23.7 147 46-219 18-171 (611)
223 3sfz_A APAF-1, apoptotic pepti 98.3 0.00043 1.5E-08 70.2 28.1 148 47-218 658-820 (1249)
224 1z68_A Fibroblast activation p 98.3 1.6E-05 5.5E-10 76.0 16.5 95 49-171 62-188 (719)
225 3o4h_A Acylamino-acid-releasin 98.3 7E-06 2.4E-10 76.6 13.4 173 10-216 113-301 (582)
226 4e54_B DNA damage-binding prot 98.3 0.00013 4.5E-09 65.3 21.3 149 47-219 120-274 (435)
227 2wg3_C Hedgehog-interacting pr 98.3 7.6E-05 2.6E-09 67.6 19.3 124 47-171 69-242 (463)
228 3pe7_A Oligogalacturonate lyas 98.3 7.8E-06 2.7E-10 71.7 12.7 170 28-216 169-371 (388)
229 3jro_A Fusion protein of prote 98.3 0.00015 5.1E-09 69.9 22.6 151 47-219 10-181 (753)
230 3amr_A 3-phytase; beta-propell 98.3 4.1E-05 1.4E-09 66.1 16.3 172 27-219 50-255 (355)
231 3s25_A Hypothetical 7-bladed b 98.3 0.00015 5.1E-09 61.9 19.9 167 27-234 37-218 (302)
232 3k26_A Polycomb protein EED; W 98.3 8.8E-05 3E-09 64.0 18.9 152 47-219 19-184 (366)
233 1nr0_A Actin interacting prote 98.3 0.0015 5E-08 61.3 28.5 113 47-183 148-270 (611)
234 3dw8_B Serine/threonine-protei 98.3 0.00028 9.6E-09 62.8 22.6 150 47-219 29-250 (447)
235 1yfq_A Cell cycle arrest prote 98.3 3.1E-05 1.1E-09 66.4 15.7 147 47-219 57-217 (342)
236 3jrp_A Fusion protein of prote 98.3 0.00038 1.3E-08 60.2 22.8 151 47-219 56-232 (379)
237 3dw8_B Serine/threonine-protei 98.3 0.0015 5E-08 58.1 27.0 103 94-216 179-305 (447)
238 4aow_A Guanine nucleotide-bind 98.3 0.00085 2.9E-08 57.2 24.5 147 48-218 130-278 (340)
239 3i2n_A WD repeat-containing pr 98.2 0.00022 7.4E-09 61.3 20.0 147 47-219 66-235 (357)
240 3iz6_a 40S ribosomal protein R 98.2 0.00013 4.4E-09 64.1 18.8 117 47-183 250-375 (380)
241 3f3f_A Nucleoporin SEH1; struc 98.2 0.00089 3E-08 56.8 23.7 152 46-219 11-193 (351)
242 2pm7_B Protein transport prote 98.2 0.0011 3.9E-08 55.8 24.0 116 47-184 10-133 (297)
243 4aow_A Guanine nucleotide-bind 98.2 0.0022 7.7E-08 54.5 27.2 148 47-219 87-238 (340)
244 1k32_A Tricorn protease; prote 98.2 5.8E-05 2E-09 75.4 17.0 141 48-215 339-491 (1045)
245 3odt_A Protein DOA1; ubiquitin 98.2 0.00074 2.5E-08 56.7 21.8 157 47-240 105-264 (313)
246 1k32_A Tricorn protease; prote 98.1 0.00017 5.7E-09 72.2 19.7 138 48-214 297-438 (1045)
247 4a5s_A Dipeptidyl peptidase 4 98.1 0.0011 3.6E-08 63.8 24.6 95 51-170 66-189 (740)
248 3amr_A 3-phytase; beta-propell 98.1 0.0002 6.7E-09 61.9 17.2 138 58-218 39-202 (355)
249 3mmy_A MRNA export factor; mRN 98.1 0.00041 1.4E-08 59.7 19.4 59 47-111 87-148 (368)
250 3jro_A Fusion protein of prote 98.1 0.0003 1E-08 67.8 19.8 151 47-219 54-230 (753)
251 4a5s_A Dipeptidyl peptidase 4 98.1 0.00084 2.9E-08 64.5 22.9 123 49-184 19-142 (740)
252 3f3f_A Nucleoporin SEH1; struc 98.1 0.0017 5.7E-08 55.0 22.1 149 47-219 58-241 (351)
253 4gga_A P55CDC, cell division c 98.0 0.0057 1.9E-07 54.2 26.0 144 51-219 110-253 (420)
254 3v7d_B Cell division control p 98.0 0.0065 2.2E-07 54.3 27.8 84 131-219 289-373 (464)
255 1yfq_A Cell cycle arrest prote 98.0 0.00011 3.9E-09 62.8 14.2 160 47-238 102-289 (342)
256 1xfd_A DIP, dipeptidyl aminope 98.0 0.00035 1.2E-08 66.6 19.0 157 48-218 256-431 (723)
257 2ovr_B FBW7, F-BOX/WD repeat p 98.0 0.006 2E-07 54.4 26.1 154 48-239 201-356 (445)
258 3c5m_A Oligogalacturonate lyas 98.0 0.00012 4.1E-09 64.1 14.5 151 52-216 86-258 (396)
259 2xdw_A Prolyl endopeptidase; a 98.0 0.00051 1.8E-08 65.6 19.8 195 28-241 152-378 (710)
260 2wg3_C Hedgehog-interacting pr 98.0 0.00011 3.7E-09 66.5 14.0 165 43-215 10-242 (463)
261 3gre_A Serine/threonine-protei 98.0 0.00086 2.9E-08 59.6 19.8 163 47-238 64-252 (437)
262 2ovr_B FBW7, F-BOX/WD repeat p 98.0 0.0078 2.7E-07 53.6 26.6 221 47-307 160-389 (445)
263 3mmy_A MRNA export factor; mRN 98.0 0.0029 9.9E-08 54.2 22.6 116 46-184 39-161 (368)
264 2j04_B YDR362CP, TAU91; beta p 98.0 0.00061 2.1E-08 62.8 18.9 147 47-219 267-420 (524)
265 4gga_A P55CDC, cell division c 98.0 0.0081 2.8E-07 53.2 29.2 140 47-212 148-293 (420)
266 3azo_A Aminopeptidase; POP fam 97.9 0.00071 2.4E-08 63.8 19.3 153 11-184 134-326 (662)
267 2ad6_A Methanol dehydrogenase 97.9 0.013 4.4E-07 54.5 27.7 85 97-184 239-336 (571)
268 4a11_B DNA excision repair pro 97.9 0.0017 6E-08 56.6 20.5 154 46-219 43-210 (408)
269 4ggc_A P55CDC, cell division c 97.9 0.0066 2.3E-07 50.9 28.6 111 48-184 69-182 (318)
270 2pm7_B Protein transport prote 97.9 0.00084 2.9E-08 56.6 17.5 151 47-219 100-277 (297)
271 2j04_A TAU60, YPL007P, hypothe 97.9 0.0032 1.1E-07 58.1 21.5 157 46-234 85-256 (588)
272 1z68_A Fibroblast activation p 97.9 0.00025 8.4E-09 67.7 14.5 119 49-184 18-140 (719)
273 1tl2_A L10, protein (tachylect 97.9 0.00046 1.6E-08 55.4 13.6 137 48-214 42-199 (236)
274 2ad6_A Methanol dehydrogenase 97.9 0.015 5.1E-07 54.1 26.1 79 51-146 110-190 (571)
275 3c5m_A Oligogalacturonate lyas 97.9 0.00058 2E-08 59.6 15.9 147 48-215 189-370 (396)
276 2xdw_A Prolyl endopeptidase; a 97.8 0.0029 1E-07 60.4 21.6 132 70-215 100-252 (710)
277 2gop_A Trilobed protease; beta 97.8 0.00043 1.5E-08 59.5 14.4 119 69-215 44-188 (347)
278 3vu4_A KMHSV2; beta-propeller 97.8 0.0031 1.1E-07 54.7 19.8 72 94-184 197-272 (355)
279 2oaj_A Protein SNI1; WD40 repe 97.8 0.0033 1.1E-07 61.8 21.9 158 47-236 59-247 (902)
280 1p22_A F-BOX/WD-repeat protein 97.8 0.018 6E-07 51.2 24.7 203 10-250 135-344 (435)
281 1kb0_A Quinohemoprotein alcoho 97.8 0.0064 2.2E-07 57.8 22.7 119 50-184 122-293 (677)
282 2j04_B YDR362CP, TAU91; beta p 97.8 0.00037 1.3E-08 64.2 13.5 114 47-183 309-428 (524)
283 3bg1_A Protein SEC13 homolog; 97.8 0.0025 8.6E-08 54.2 17.9 153 47-219 104-285 (316)
284 2j04_A TAU60, YPL007P, hypothe 97.8 0.0038 1.3E-07 57.6 19.8 145 47-215 16-200 (588)
285 1p22_A F-BOX/WD-repeat protein 97.7 0.011 3.9E-07 52.4 22.5 216 53-307 138-363 (435)
286 2oit_A Nucleoporin 214KDA; NH2 97.7 0.00057 1.9E-08 61.4 13.2 119 94-238 94-229 (434)
287 1w6s_A Methanol dehydrogenase 97.7 0.036 1.2E-06 51.8 26.5 82 50-146 109-196 (599)
288 3zwu_A Alkaline phosphatase PH 97.7 0.0008 2.8E-08 62.4 14.2 119 45-169 382-548 (592)
289 2gop_A Trilobed protease; beta 97.6 0.0092 3.1E-07 51.0 19.0 141 49-218 106-283 (347)
290 2bkl_A Prolyl endopeptidase; m 97.6 0.0069 2.4E-07 57.6 19.6 144 58-216 79-247 (695)
291 3bg1_A Protein SEC13 homolog; 97.6 0.004 1.4E-07 53.0 16.3 115 47-183 14-136 (316)
292 3gre_A Serine/threonine-protei 97.6 0.0054 1.8E-07 54.4 17.8 114 47-184 215-360 (437)
293 2oaj_A Protein SNI1; WD40 repe 97.5 0.0093 3.2E-07 58.6 20.3 103 94-219 19-121 (902)
294 1yr2_A Prolyl oligopeptidase; 97.5 0.013 4.6E-07 56.1 20.3 131 70-215 135-287 (741)
295 4ggc_A P55CDC, cell division c 97.5 0.037 1.3E-06 46.2 27.7 144 51-219 30-173 (318)
296 1yiq_A Quinohemoprotein alcoho 97.4 0.098 3.3E-06 49.7 25.8 71 225-297 458-536 (689)
297 1yr2_A Prolyl oligopeptidase; 97.4 0.014 4.8E-07 55.9 19.3 192 28-241 190-404 (741)
298 2bkl_A Prolyl endopeptidase; m 97.4 0.017 5.9E-07 54.9 19.5 169 50-241 171-360 (695)
299 1tl2_A L10, protein (tachylect 97.3 0.0028 9.5E-08 50.9 10.9 102 93-218 41-155 (236)
300 3iuj_A Prolyl endopeptidase; h 97.3 0.061 2.1E-06 51.1 22.4 170 50-241 178-368 (693)
301 4gq1_A NUP37; propeller, trans 97.3 0.045 1.5E-06 48.0 19.8 60 157-218 321-381 (393)
302 3b7f_A Glycosyl hydrolase, BNR 97.3 0.012 4.2E-07 51.7 16.1 140 10-169 116-296 (394)
303 3vu4_A KMHSV2; beta-propeller 97.3 0.079 2.7E-06 45.7 28.8 75 47-145 20-94 (355)
304 1w6s_A Methanol dehydrogenase 97.2 0.13 4.6E-06 47.9 27.2 85 97-184 245-343 (599)
305 3b7f_A Glycosyl hydrolase, BNR 97.2 0.024 8.2E-07 49.8 17.7 184 8-215 54-298 (394)
306 1kb0_A Quinohemoprotein alcoho 97.1 0.098 3.4E-06 49.6 21.9 83 131-217 456-540 (677)
307 2w18_A PALB2, fancn, partner a 97.1 0.044 1.5E-06 47.4 17.3 50 131-181 304-355 (356)
308 3iuj_A Prolyl endopeptidase; h 97.0 0.22 7.7E-06 47.2 23.3 125 48-184 130-269 (693)
309 1flg_A Protein (quinoprotein e 97.0 0.22 7.4E-06 46.4 27.1 71 225-297 469-547 (582)
310 2w18_A PALB2, fancn, partner a 97.0 0.14 4.9E-06 44.1 21.1 152 58-219 192-349 (356)
311 4a9v_A PHOX; hydrolase, beta-p 97.0 0.0019 6.5E-08 59.2 8.2 65 45-113 474-551 (592)
312 2hz6_A Endoplasmic reticulum t 97.0 0.00073 2.5E-08 59.3 5.0 181 2-239 12-200 (369)
313 1yiq_A Quinohemoprotein alcoho 96.9 0.18 6.2E-06 47.9 20.9 82 131-217 454-538 (689)
314 1kv9_A Type II quinohemoprotei 96.8 0.35 1.2E-05 45.7 27.6 88 97-184 234-334 (668)
315 4gq1_A NUP37; propeller, trans 96.8 0.25 8.4E-06 43.2 20.3 98 68-184 111-219 (393)
316 1kv9_A Type II quinohemoprotei 96.7 0.22 7.6E-06 47.1 19.9 83 131-217 437-521 (668)
317 2oit_A Nucleoporin 214KDA; NH2 96.6 0.2 6.7E-06 44.7 18.4 115 47-183 150-278 (434)
318 1flg_A Protein (quinoprotein e 96.6 0.4 1.4E-05 44.5 20.9 83 130-217 464-549 (582)
319 3zwu_A Alkaline phosphatase PH 96.5 0.04 1.4E-06 51.1 12.9 66 152-217 384-496 (592)
320 2xbg_A YCF48-like protein; pho 96.3 0.15 5.1E-06 43.5 15.0 141 48-217 164-313 (327)
321 2hz6_A Endoplasmic reticulum t 95.9 0.0038 1.3E-07 54.6 2.8 102 131-240 18-120 (369)
322 1xip_A Nucleoporin NUP159; bet 95.8 0.3 1E-05 42.9 14.8 152 48-241 39-203 (388)
323 2xbg_A YCF48-like protein; pho 95.8 0.78 2.7E-05 39.0 23.2 142 48-217 123-270 (327)
324 3sbq_A Nitrous-oxide reductase 95.8 0.066 2.2E-06 48.9 10.3 88 133-220 299-401 (638)
325 1k3i_A Galactose oxidase precu 94.9 0.43 1.5E-05 44.9 13.6 116 48-183 187-323 (656)
326 2xe4_A Oligopeptidase B; hydro 94.8 0.58 2E-05 44.9 14.4 105 95-214 176-289 (751)
327 2xe4_A Oligopeptidase B; hydro 94.3 2.6 8.8E-05 40.3 17.6 116 49-184 176-305 (751)
328 2be1_A Serine/threonine-protei 94.0 2.6 8.9E-05 36.1 16.4 106 58-184 10-131 (339)
329 2xn4_A Kelch-like protein 2; s 93.7 2.6 8.9E-05 34.9 19.2 141 51-214 103-258 (302)
330 2vpj_A Kelch-like protein 12; 93.4 2.9 9.8E-05 34.5 20.4 106 58-183 112-231 (301)
331 3sbq_A Nitrous-oxide reductase 93.3 3.6 0.00012 37.8 15.3 106 93-218 323-456 (638)
332 4asc_A Kelch repeat and BTB do 92.5 4.1 0.00014 33.9 19.0 170 9-216 13-205 (315)
333 1zgk_A Kelch-like ECH-associat 92.4 4.1 0.00014 33.8 18.8 106 58-183 121-240 (308)
334 3ii7_A Kelch-like protein 7; p 92.2 4.4 0.00015 33.5 19.8 139 58-215 101-255 (306)
335 1zgk_A Kelch-like ECH-associat 92.0 4.7 0.00016 33.5 18.2 134 58-214 70-222 (308)
336 2woz_A Kelch repeat and BTB do 91.9 4.8 0.00017 33.6 14.6 74 58-148 158-238 (318)
337 2xn4_A Kelch-like protein 2; s 91.7 4.9 0.00017 33.2 19.1 134 58-214 61-211 (302)
338 3ii7_A Kelch-like protein 7; p 91.5 5.2 0.00018 33.1 23.0 133 58-213 55-206 (306)
339 1k3i_A Galactose oxidase precu 91.4 9.2 0.00031 35.7 21.6 57 51-112 247-305 (656)
340 4asc_A Kelch repeat and BTB do 91.4 5.5 0.00019 33.1 18.1 139 51-214 93-250 (315)
341 2uvk_A YJHT; unknown function, 91.0 6.6 0.00023 33.3 15.7 119 58-182 65-225 (357)
342 1xip_A Nucleoporin NUP159; bet 90.9 3.8 0.00013 35.8 12.5 133 49-214 90-231 (388)
343 2zwa_A Leucine carboxyl methyl 90.9 11 0.00038 35.6 19.7 145 51-214 444-614 (695)
344 2vpj_A Kelch-like protein 12; 90.5 6.4 0.00022 32.3 23.9 134 58-214 62-213 (301)
345 2woz_A Kelch repeat and BTB do 88.7 9.4 0.00032 31.7 19.2 136 58-215 56-214 (318)
346 2cn3_A Xyloglucanase, beta-1,4 86.0 24 0.00083 33.5 16.2 124 48-184 24-164 (737)
347 2zwa_A Leucine carboxyl methyl 81.6 36 0.0012 32.1 15.6 120 50-182 493-634 (695)
348 2uvk_A YJHT; unknown function, 79.9 26 0.00089 29.4 19.0 126 69-215 169-324 (357)
349 1sqj_A OXG-RCBH, oligoxylogluc 79.5 45 0.0015 32.0 16.6 154 47-216 15-190 (789)
350 2be1_A Serine/threonine-protei 79.0 7.2 0.00025 33.3 7.9 102 130-240 18-139 (339)
351 1sqj_A OXG-RCBH, oligoxylogluc 77.2 53 0.0018 31.5 14.8 117 48-184 65-201 (789)
352 3a0f_A Xyloglucanase; beta-pro 68.4 57 0.0019 31.1 12.1 156 46-217 20-203 (763)
353 3f6k_A Sortilin; protein sorti 65.4 92 0.0031 29.3 14.5 103 67-184 64-169 (685)
354 2cn3_A Xyloglucanase, beta-1,4 64.3 69 0.0024 30.3 11.8 58 94-170 24-91 (737)
355 3a0f_A Xyloglucanase; beta-pro 53.4 80 0.0027 30.1 10.1 25 156-181 735-760 (763)
356 3s9j_A Member of DUF4221 famil 40.8 65 0.0022 27.7 6.7 72 162-238 38-116 (369)
357 3hx6_A Type 4 fimbrial biogene 25.7 3E+02 0.01 25.2 8.5 54 69-142 224-285 (570)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.97 E-value=1.2e-28 Score=215.09 Aligned_cols=266 Identities=32% Similarity=0.598 Sum_probs=198.2
Q ss_pred EEEeCCCCC-eEEEEEeccccccccCCCCCccc--------------------cccceeceEEEeCCCCcEEEEECCCce
Q 046018 12 LKWQGDELG-WTEFAVTTSQRKECVRPFAPDIE--------------------HICGRPLGIRFDKKTGDLYIADAYLGF 70 (310)
Q Consensus 12 ~~~~~~~~~-W~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~p~gl~~d~~~g~l~v~~~~~gi 70 (310)
..|+++..- |++.....+.+++..+..+..+. .....|.||++++++|+|||++..++|
T Consensus 24 i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i 103 (322)
T 2fp8_A 24 FTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHL 103 (322)
T ss_dssp EECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEE
T ss_pred EEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCE
Confidence 446665443 88777777888877653322211 123579999999647899999988889
Q ss_pred EEEeCCCCeEEEEEeecCCccccCCcceEEeC-CCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEec
Q 046018 71 QVVGPEGGLATQLVTEAAGQPLRFTNDLDIDE-HKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQ 149 (310)
Q Consensus 71 ~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~ 149 (310)
+++|++++.++.+.....+.+...|++|++++ +|+ +||++....+....+...+......+.|+++|+++++.+.+..
T Consensus 104 ~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~ 182 (322)
T 2fp8_A 104 SVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK 182 (322)
T ss_dssp EEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE
T ss_pred EEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc
Confidence 99999877666664433344556899999999 999 9999975433222222333334456889999998888877666
Q ss_pred CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCCccceeeeeecc
Q 046018 150 GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS 229 (310)
Q Consensus 150 ~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~ 229 (310)
.+..|+||++++|++.||++++.+++|++|++++...+..+.+...++ |++|++|++|+|||+++..... .
T Consensus 183 ~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~----~---- 253 (322)
T 2fp8_A 183 ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDG----N---- 253 (322)
T ss_dssp EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTS----S----
T ss_pred CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccc----c----
Confidence 678899999999999999999999999999998654444555555666 9999999999999999874421 0
Q ss_pred ccccEEeeccchhhhhcccccCCCCceEEEEECCCCCEEEEEEcCCCCeecceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 230 WLGKTLLKLPLSFRQLHSLLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 230 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
|. ......+.+++++|+++..+..++|..+..++.++..+++||+++..+++|.+|++
T Consensus 254 -----------~~---------~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 254 -----------MH---------GRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp -----------TT---------SCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC
T ss_pred -----------cc---------CCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEec
Confidence 00 01134678899999999998877776667788887789999999999999999986
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.94 E-value=5.9e-25 Score=192.26 Aligned_cols=230 Identities=19% Similarity=0.221 Sum_probs=167.3
Q ss_pred ceeceEEEeCC-CC--cEEEEECCCc-----eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhh
Q 046018 47 GRPLGIRFDKK-TG--DLYIADAYLG-----FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQR 118 (310)
Q Consensus 47 ~~p~gl~~d~~-~g--~l~v~~~~~g-----i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~ 118 (310)
-+|+||.+..+ +| +|||+++..+ |++++++++..+.+ ....+.+...||+++++++|+ +|++++...-..
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~-~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~ 189 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHL-KTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDP 189 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEE-EEECCTTCSSEEEEEEEETTE-EEEEESCSCSSH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEE-eccccCCCCCCceEEEeCCCC-EEecCCcEeCCc
Confidence 48999998552 34 6999998742 88889987766544 444566788999999999999 999986421111
Q ss_pred hhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccC-CCCCcceeeeeCCC
Q 046018 119 RQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHG-PNSGKQDVFAELPG 197 (310)
Q Consensus 119 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~ 197 (310)
.....+.+.+...|.|+++++. +.+.+..++..||||+++||+++||++++..++|++|+.+. +..+..+.+ ..++
T Consensus 190 ~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g 266 (355)
T 3sre_A 190 YLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDT 266 (355)
T ss_dssp HHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSS
T ss_pred ccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCC
Confidence 1112223334567899999984 56667788889999999999999999999999999999874 233333444 5678
Q ss_pred CCCeeEECC-CCCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCCCceEEEEEC----CCCCEEEEEE
Q 046018 198 FPDNVRSNS-NGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGKPHATAIKLS----EKGEVLEVLE 272 (310)
Q Consensus 198 ~p~~i~~d~-~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~g~~~~~~~ 272 (310)
.|||+++|+ +|+||+|...++.. +.++++.. .....+.++. .++++.+.+.
T Consensus 267 ~PDGi~vD~e~G~lwva~~~~g~~----v~~~~P~~--------------------~~~s~v~rI~~~~~~~~~v~~v~~ 322 (355)
T 3sre_A 267 LVDNISVDPVTGDLWVGCHPNGMR----IFFYDAEN--------------------PPGSEVLRIQDILSEEPKVTVVYA 322 (355)
T ss_dssp EEEEEEECTTTCCEEEEEESCHHH----HHSCCTTS--------------------CCCEEEEEEECTTSSSCEEEEEEE
T ss_pred CCceEEEeCCCCcEEEEecCCceE----EEEECCCC--------------------CCCCEEEEEEccCCCCcEEEEEEE
Confidence 999999999 59999988644432 44444431 0011233433 4567777887
Q ss_pred cCCCCeecceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 273 DCEGKTLSFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 273 ~~~g~~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
+ +|..+...|.++..+|+||+|++..+ +..|++
T Consensus 323 d-dG~~l~~~T~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 323 E-NGTVLQGSTVAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp E-CSSSCCSEEEEEEETTEEEEEESSSC-EEEEEC
T ss_pred c-CCCEEEeeEEEEEECCEEEEEEcCCC-ceeccC
Confidence 6 88888888888889999999999777 777764
No 3
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.92 E-value=5.9e-24 Score=183.32 Aligned_cols=238 Identities=14% Similarity=0.155 Sum_probs=173.9
Q ss_pred CcEEEEEeCCCCC--eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEe
Q 046018 8 DGRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVT 85 (310)
Q Consensus 8 ~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~ 85 (310)
-+.-+.|+++.+. |++.....++++++.+... ........|.++++++ +|+||++. ..+|+++|+++++++.+..
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~-dG~l~v~~-~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQ-SGGYVATI-GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBT-TSSEEEEE-TTEEEEEETTTTEEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECC-CCCEEEEE-CCeEEEEECCCCcEEEEEe
Confidence 3467889987666 8888888899998876442 2222346788999999 88999997 4689999999998877655
Q ss_pred ecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCe
Q 046018 86 EAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTF 165 (310)
Q Consensus 86 ~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~ 165 (310)
...+.+...+++++++++|+ +|++++...... .......+.|++++++ ++...+......|+|++++||++.
T Consensus 91 ~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~------~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAP------AVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSC-EEEEEEECCSBT------TBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCE
T ss_pred cCCCCCCCCCCCEEECCCCC-EEEecCCccccc------ccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCE
Confidence 43344456789999999999 999984311000 0001235789999986 556656666778999999999999
Q ss_pred EEEEecCCceEEEEEcc--CCCCCcceeeeeC---CCCCCeeEECCCCCEEEEEecCCccceeeeeecccc-ccEEeecc
Q 046018 166 ILIAETSNCRILRFWLH--GPNSGKQDVFAEL---PGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWL-GKTLLKLP 239 (310)
Q Consensus 166 lyv~~~~~~~i~~~~~~--~~~~~~~~~~~~~---~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~-g~~~~~~~ 239 (310)
||++++.+++|++|+.+ .+.....+.+... ++.|+++++|++|+||++++.++. |.++++. |+.+..++
T Consensus 163 lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~-----v~~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 163 FYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR-----VIRLDPVTGKRLQTVK 237 (297)
T ss_dssp EEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE-----EEEECTTTCCEEEEEE
T ss_pred EEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE-----EEEEcCCCceEEEEEE
Confidence 99999999999999874 2322223444443 367999999999999999998775 6666664 88888888
Q ss_pred chhhhhcccccCCCC-ceEEEEE
Q 046018 240 LSFRQLHSLLVGGKP-HATAIKL 261 (310)
Q Consensus 240 ~~~~~~~~~~~~~~~-~~~~~~~ 261 (310)
.|...+++++|++++ ..+++.-
T Consensus 238 ~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 238 LPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp CSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCCceEEEEeCCCCCEEEEEc
Confidence 877677777776443 3444443
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.91 E-value=6.9e-22 Score=169.92 Aligned_cols=202 Identities=13% Similarity=0.158 Sum_probs=146.3
Q ss_pred cCcEEEEEeCCCCC--eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEE
Q 046018 7 ADGRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQL 83 (310)
Q Consensus 7 ~~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~ 83 (310)
....-..|+++.+. |++....++.++++.+. +..+......|.+|++++ +|+||+++.. .+|.++|+++++++.+
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGGEWESI 105 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTCCEEEE
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCCcEEEE
Confidence 34466789988773 88888888999988775 344444556789999999 8999999986 5799999987877666
Q ss_pred EeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhh-hhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecC
Q 046018 84 VTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS-SILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRD 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~-~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d 162 (310)
.....+.+...|++++++++|+ +|++++..... ..... ........+.|++++++ ++.+.+......|++++++||
T Consensus 106 ~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~-~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 106 ADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGID-KPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp ECEETTEECCCCCCEEECTTSC-EEEEECSHHHH-CGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTT
T ss_pred eeccCCCCCCCCCCEEECCCCC-EEEECCccccc-cccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCC
Confidence 5443444556799999999999 99987521000 00000 00001124689999998 777777777788999999999
Q ss_pred CCeEEEEecCCceEEEEEccC-CCC-CcceeeeeCCCCCCeeEECCCCCEEEEE
Q 046018 163 RTFILIAETSNCRILRFWLHG-PNS-GKQDVFAELPGFPDNVRSNSNGEFWVAL 214 (310)
Q Consensus 163 ~~~lyv~~~~~~~i~~~~~~~-~~~-~~~~~~~~~~~~p~~i~~d~~G~l~va~ 214 (310)
++.| ++++..++|++|+++. +.. .....+....+.|+++++|++|+||+++
T Consensus 183 g~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 183 GNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp SCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE
T ss_pred CCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc
Confidence 9977 8889899999999862 222 2223441134679999999999999999
No 5
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.90 E-value=2.1e-22 Score=174.23 Aligned_cols=203 Identities=17% Similarity=0.205 Sum_probs=145.8
Q ss_pred ccCcEEEEEeCCCCC--eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEE
Q 046018 6 VADGRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQ 82 (310)
Q Consensus 6 ~~~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~ 82 (310)
..-..-+.|+++.+. |++.....+.+++..+. ...+......|.++++++ +|+||+++.. .+|.+++++ ++++.
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQAHL 120 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-CCEEE
Confidence 334466788887764 88877788888877542 233344456789999999 8999999987 579999997 66666
Q ss_pred EEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh-hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEec
Q 046018 83 LVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI-LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSR 161 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~-~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~ 161 (310)
+.....+.+...|++++++++|+ +|+++...... ..+.... ......+.|+++|+++++++.+. ....|+|++++|
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~-~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~sp 197 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLR-KPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSP 197 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSC-EEEECCSGGGS-CGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECT
T ss_pred EEeccCCCccCCCCCEEECCCCC-EEEeCcCCCcc-ccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcC
Confidence 65444455567899999999999 99987531000 0000000 00112467999999888877766 677899999999
Q ss_pred CCCeEEEEecCC-----ceEEEEEccCCCCCcceeeee-CCCCCCeeEECCCCCEEEEE
Q 046018 162 DRTFILIAETSN-----CRILRFWLHGPNSGKQDVFAE-LPGFPDNVRSNSNGEFWVAL 214 (310)
Q Consensus 162 d~~~lyv~~~~~-----~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~l~va~ 214 (310)
|++.||++++.. +.|++|+.++........+.. ..+.|+++++|++|+||+++
T Consensus 198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~ 256 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS 256 (305)
T ss_dssp TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC
T ss_pred CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec
Confidence 999999998863 799999987543333334433 35789999999999999997
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.87 E-value=3.8e-20 Score=159.78 Aligned_cols=205 Identities=17% Similarity=0.261 Sum_probs=139.2
Q ss_pred cEEEEEeCCCCCeEE--------EEEeccccccccCCCCCcccc-----ccceeceEEEeCCC-CcEEEEECCCceEEEe
Q 046018 9 GRILKWQGDELGWTE--------FAVTTSQRKECVRPFAPDIEH-----ICGRPLGIRFDKKT-GDLYIADAYLGFQVVG 74 (310)
Q Consensus 9 ~~i~~~~~~~~~W~~--------~~~~~~~~~~~~~~~~~~~~~-----~~~~p~gl~~d~~~-g~l~v~~~~~gi~~~d 74 (310)
..-..|+++..-|+. ....++.++++.+.++..+.. ....|.++++++ + |+||+++...+|+++|
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~-~~g~l~v~~~~~~l~~~d 98 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR-DANQLFVADMRLGLLVVQ 98 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS-SSSEEEEEETTTEEEEEE
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEec-CCCcEEEEECCCCEEEEe
Confidence 345667754433775 566778888865544333222 235788999999 6 9999999877899999
Q ss_pred CCCCeEEEE-EeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcc
Q 046018 75 PEGGLATQL-VTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAF 153 (310)
Q Consensus 75 ~~~~~~~~~-~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~ 153 (310)
++ ++++.+ .......+...+++|+++++|+ +|+++.........+ ........+.|++++++ ++.+.+......
T Consensus 99 ~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~ 173 (314)
T 1pjx_A 99 TD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADY--TRSMQEKFGSIYCFTTD-GQMIQVDTAFQF 173 (314)
T ss_dssp TT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCC--CBTTSSSCEEEEEECTT-SCEEEEEEEESS
T ss_pred CC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccc--cccccCCCCeEEEECCC-CCEEEeccCCCC
Confidence 99 776554 3322223345799999999999 999985420000000 00001124689999987 666665555667
Q ss_pred cceEEEe----cCCCeEEEEecCCceEEEEEcc-CCCCCcceeeeeCC----CCCCeeEECCCCCEEEEEecCCc
Q 046018 154 ANGVALS----RDRTFILIAETSNCRILRFWLH-GPNSGKQDVFAELP----GFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 154 ~~gi~~~----~d~~~lyv~~~~~~~i~~~~~~-~~~~~~~~~~~~~~----~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
|++++++ +|++.||+++..+++|++|+.+ .+.......+...+ +.|+++++|++|+||+++...+.
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 8999999 9998899998888999999976 22222222333333 56899999999999999876553
No 7
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.86 E-value=3.6e-20 Score=161.74 Aligned_cols=220 Identities=15% Similarity=0.141 Sum_probs=156.3
Q ss_pred cEEEEEeCCCCC--eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEee
Q 046018 9 GRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTE 86 (310)
Q Consensus 9 ~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~ 86 (310)
+.-+.|+++.+. |++....+|.++++.+.+.... .....+.++++++ +|++|++. ..+|+++|+++++++.+...
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~v~~i~~~~-dg~l~v~~-~~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVH-ALPFMGSALAKIS-DSKQLIAS-DDGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEE-ECSSCEEEEEEEE-TTEEEEEE-TTEEEEEETTTCCEEEEECS
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEE-ECCCcceEEEEeC-CCeEEEEE-CCCEEEEECCCCcEEEEeeC
Confidence 356789987665 8888888899998876432222 2235688999999 89999997 45799999988887666433
Q ss_pred cCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeE
Q 046018 87 AAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFI 166 (310)
Q Consensus 87 ~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~l 166 (310)
....+...+++++++++|+ +|+++.... .....+.|++++ +++.+.+......+++++++||++.|
T Consensus 128 ~~~~~~~~~~~i~~d~~G~-l~v~~~~~~-----------~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGA-LWIGTMGRK-----------AETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTG 193 (326)
T ss_dssp STTCTTEEEEEEEECTTSC-EEEEEEETT-----------CCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEE
T ss_pred CCCCCCCCCCCEEECCCCC-EEEEeCCCc-----------CCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEE
Confidence 2222345689999999999 999874210 011357899999 47776665555678999999999999
Q ss_pred EEEecCCceEEEEEcc--CC-CCCcceeeeeC---CCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEeeccc
Q 046018 167 LIAETSNCRILRFWLH--GP-NSGKQDVFAEL---PGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPL 240 (310)
Q Consensus 167 yv~~~~~~~i~~~~~~--~~-~~~~~~~~~~~---~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~ 240 (310)
|++++..++|++|+.+ ++ .......+... .+.|+++++|++|+||++++.++. |.+++++++.+..+..
T Consensus 194 yv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~-----v~~~d~~g~~~~~i~~ 268 (326)
T 2ghs_A 194 YFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA-----VDRYDTDGNHIARYEV 268 (326)
T ss_dssp EEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-----EEEECTTCCEEEEEEC
T ss_pred EEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE-----EEEECCCCCEEEEEEC
Confidence 9999888999999986 33 33333344332 357899999999999999987654 5666667776666655
Q ss_pred hhhhhccccc
Q 046018 241 SFRQLHSLLV 250 (310)
Q Consensus 241 ~~~~~~~~~~ 250 (310)
+...+.++++
T Consensus 269 ~~~~~~~~af 278 (326)
T 2ghs_A 269 PGKQTTCPAF 278 (326)
T ss_dssp SCSBEEEEEE
T ss_pred CCCCcEEEEE
Confidence 5433444433
No 8
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=2.3e-18 Score=150.43 Aligned_cols=234 Identities=17% Similarity=0.255 Sum_probs=159.7
Q ss_pred ccccceeceEEEeCCCCcEEEEECCC-------------------------ceEEEeCCCCeEEEEEeecCCccccCCcc
Q 046018 43 EHICGRPLGIRFDKKTGDLYIADAYL-------------------------GFQVVGPEGGLATQLVTEAAGQPLRFTND 97 (310)
Q Consensus 43 ~~~~~~p~gl~~d~~~g~l~v~~~~~-------------------------gi~~~d~~~~~~~~~~~~~~~~~~~~~~~ 97 (310)
....+.|.+|++++ +|+||+++... .|+++|++++++..... ......|++
T Consensus 20 ~~~l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~---~~~~~~p~g 95 (329)
T 3fvz_A 20 YLLPGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG---KNLFYLPHG 95 (329)
T ss_dssp GCCCSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC---TTTCSSEEE
T ss_pred ceecCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC---CCccCCceE
Confidence 34457899999999 89999999875 38999998777643321 234457999
Q ss_pred eEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCC--eEEEEe---------cCCcccceEEEecCCCeE
Q 046018 98 LDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTK--EVTILL---------QGLAFANGVALSRDRTFI 166 (310)
Q Consensus 98 i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--~~~~~~---------~~~~~~~gi~~~~d~~~l 166 (310)
|+++++|+ +|+++.. .++|++|++++. ....+. ..+..|++|+++|+++.|
T Consensus 96 ia~d~~g~-l~v~d~~-----------------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~l 157 (329)
T 3fvz_A 96 LSIDTDGN-YWVTDVA-----------------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAV 157 (329)
T ss_dssp EEECTTSC-EEEEETT-----------------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCE
T ss_pred EEECCCCC-EEEEECC-----------------CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeE
Confidence 99999999 9999964 678999998754 233332 223469999999943449
Q ss_pred EEEec-CCceEEEEEccCCCCCcceeeeeC-------C---CCCCeeEECCC-CCEEEEEecCCccceeeeeecccc-cc
Q 046018 167 LIAET-SNCRILRFWLHGPNSGKQDVFAEL-------P---GFPDNVRSNSN-GEFWVALHAKKGLFGKLILLNSWL-GK 233 (310)
Q Consensus 167 yv~~~-~~~~i~~~~~~~~~~~~~~~~~~~-------~---~~p~~i~~d~~-G~l~va~~~~~~~~~~~i~~~~~~-g~ 233 (310)
|++++ .+++|.+|+.++... ..+... + ..|.++++|++ |+|||++..++. |..++.. |+
T Consensus 158 yv~d~~~~~~I~~~~~~g~~~---~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-----I~~~~~~~G~ 229 (329)
T 3fvz_A 158 FVSDGYCNSRIVQFSPSGKFV---TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-----IQCFKTDTKE 229 (329)
T ss_dssp EEEECSSCCEEEEECTTSCEE---EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-----EEEEETTTCC
T ss_pred EEEeCCCCCeEEEEcCCCCEE---EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-----EEEEECCCCc
Confidence 99997 689999999765321 112110 0 24899999998 899999988776 5666655 88
Q ss_pred EEeeccchh--hhhcccc--------------cCCCCceEEEEEC-CCCCEEEEEEcCCCCeecceeEEEEe-CCEEEEe
Q 046018 234 TLLKLPLSF--RQLHSLL--------------VGGKPHATAIKLS-EKGEVLEVLEDCEGKTLSFISEVEEK-DGQLWMG 295 (310)
Q Consensus 234 ~~~~~~~~~--~~~~~~~--------------~~~~~~~~~~~~d-~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~l~vg 295 (310)
.+..+..+. ..+..+. +.......+..++ .+|+++..+.. ....+..+..++.. +|.||++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~-~~~~~~~p~~ia~~~dG~lyva 308 (329)
T 3fvz_A 230 FVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP-VRKHFDMPHDIVASEDGTVYIG 308 (329)
T ss_dssp EEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC-SSSCCSSEEEEEECTTSEEEEE
T ss_pred EEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC-CCCccCCeeEEEECCCCCEEEE
Confidence 777664321 1111111 1111122344455 45777766632 12334567777654 6799999
Q ss_pred cCCCCeEEEecc
Q 046018 296 SVLMPFIGIYNR 307 (310)
Q Consensus 296 s~~~~~i~~~~~ 307 (310)
...+++|.++++
T Consensus 309 d~~~~~I~~~~~ 320 (329)
T 3fvz_A 309 DAHTNTVWKFTL 320 (329)
T ss_dssp ESSSCCEEEEEE
T ss_pred ECCCCEEEEEeC
Confidence 999999999986
No 9
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.83 E-value=1.1e-18 Score=150.85 Aligned_cols=211 Identities=17% Similarity=0.139 Sum_probs=148.1
Q ss_pred EEEEeCCCCC-eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECC-Cc--eEEEeCCCCeEEEEEee
Q 046018 11 ILKWQGDELG-WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAY-LG--FQVVGPEGGLATQLVTE 86 (310)
Q Consensus 11 i~~~~~~~~~-W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~-~g--i~~~d~~~~~~~~~~~~ 86 (310)
-..|+++..- |++.....+.++++.+.. .........|++|++++ +|+|||++.. ++ |++++..+++++.+...
T Consensus 36 gia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~~~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 36 NLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHATVEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCCE-EEEEECSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred eEEECCCCCEEEEeCCCCeEEEECCCCce-EEEEeCCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence 3456664333 454455677888876632 22333446899999999 8899999965 23 89999888887666543
Q ss_pred cCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEE-----------ecCCcccc
Q 046018 87 AAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTIL-----------LQGLAFAN 155 (310)
Q Consensus 87 ~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-----------~~~~~~~~ 155 (310)
. ....+++++..+++. +|+++.. .+.|+++|+.+++.+.. ...+..|+
T Consensus 114 ~---~~~~~~g~~~~~~~~-~~v~d~~-----------------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pn 172 (306)
T 2p4o_A 114 P---DAIFLNGITPLSDTQ-YLTADSY-----------------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN 172 (306)
T ss_dssp T---TCSCEEEEEESSSSE-EEEEETT-----------------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred C---CccccCcccccCCCc-EEEEECC-----------------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCC
Confidence 2 234577888877776 9999853 67899999976543332 12345689
Q ss_pred eEEEecCCCeEEEEecCCceEEEEEccC-CCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccE
Q 046018 156 GVALSRDRTFILIAETSNCRILRFWLHG-PNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKT 234 (310)
Q Consensus 156 gi~~~~d~~~lyv~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~ 234 (310)
|| ++|+++||++++.+++|++|+.++ +..+..+.+... ..|++|++|++|+|||+++.++. |.++++.|+.
T Consensus 173 gi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va~~~~~~-----V~~~~~~G~~ 244 (306)
T 2p4o_A 173 GL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGATHIYNS-----VVRIAPDRST 244 (306)
T ss_dssp EE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEECBTTCC-----EEEECTTCCE
T ss_pred Cc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEEeCCCCe-----EEEECCCCCE
Confidence 98 889989999999999999999875 333344444443 46999999999999999998776 6667777776
Q ss_pred --EeeccchhhhhcccccCC
Q 046018 235 --LLKLPLSFRQLHSLLVGG 252 (310)
Q Consensus 235 --~~~~~~~~~~~~~~~~~~ 252 (310)
+..++.+...|+++++++
T Consensus 245 ~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 245 TIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp EEEECGGGTCTTEEEEEECC
T ss_pred EEEeecccccCCceEEEEec
Confidence 334555555666666653
No 10
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.81 E-value=8.1e-18 Score=152.21 Aligned_cols=250 Identities=10% Similarity=0.053 Sum_probs=158.8
Q ss_pred EEEEEeCC--CCC-eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECC-----CceEEEeCCCCeEE
Q 046018 10 RILKWQGD--ELG-WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAY-----LGFQVVGPEGGLAT 81 (310)
Q Consensus 10 ~i~~~~~~--~~~-W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~-----~gi~~~d~~~~~~~ 81 (310)
.-..|+++ .+. |+.-....+.++++.+.....+......|.+|++++ +|+||+++.. .+++.++..++...
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~~~~~ 220 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRASGFTE 220 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGGTTCC
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECCCCeec
Confidence 34567764 233 553332566777775533333344557899999999 8889999973 35777776544321
Q ss_pred EEEeecCCccccCCcceEEeC-CCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeE-EEEec--CCcccceE
Q 046018 82 QLVTEAAGQPLRFTNDLDIDE-HKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEV-TILLQ--GLAFANGV 157 (310)
Q Consensus 82 ~~~~~~~~~~~~~~~~i~~d~-~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~-~~~~~--~~~~~~gi 157 (310)
.. .. .....|+++++++ +|+ |||++.. .++|++++++++.. ..+.. ....+.+|
T Consensus 221 ~~-~~---~~~~~P~giavd~~~G~-lyv~d~~-----------------~~~V~~~d~~~g~~~~~~~~~~~~~~~~~i 278 (433)
T 4hw6_A 221 RL-SL---CNARGAKTCAVHPQNGK-IYYTRYH-----------------HAMISSYDPATGTLTEEEVMMDTKGSNFHI 278 (433)
T ss_dssp EE-EE---EECSSBCCCEECTTTCC-EEECBTT-----------------CSEEEEECTTTCCEEEEEEECSCCSSCEEE
T ss_pred cc-cc---cccCCCCEEEEeCCCCe-EEEEECC-----------------CCEEEEEECCCCeEEEEEeccCCCCCcccE
Confidence 11 11 1345899999999 788 9999854 67899999987766 33332 22345689
Q ss_pred EEecCCCeEEEEecCCceEEEEEccC--CCCCcceeeeeC---------------CCCCCeeEE---------CCCCCEE
Q 046018 158 ALSRDRTFILIAETSNCRILRFWLHG--PNSGKQDVFAEL---------------PGFPDNVRS---------NSNGEFW 211 (310)
Q Consensus 158 ~~~~d~~~lyv~~~~~~~i~~~~~~~--~~~~~~~~~~~~---------------~~~p~~i~~---------d~~G~l~ 211 (310)
+++|++++||++++.+++|++++.++ +.......+... -..|.++++ |++|+||
T Consensus 279 a~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~ly 358 (433)
T 4hw6_A 279 VWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFY 358 (433)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEE
T ss_pred EEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEE
Confidence 99999999999999999999999773 222211222211 135888999 9999999
Q ss_pred EEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCCCceEEEEECCCCCEEEEEEcCCCCeecceeEEEEe--C
Q 046018 212 VALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFISEVEEK--D 289 (310)
Q Consensus 212 va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~--~ 289 (310)
|++..++. |.+++++|........+. .+ ..|. ..- ..+....+..+..++.. +
T Consensus 359 vaD~~n~~-----I~~~~~~G~v~t~~G~g~----~~--------------~~G~-~dG-~~~~~~~~~~P~giavd~~~ 413 (433)
T 4hw6_A 359 FCDRDSHT-----VRVLTPEGRVTTYAGRGN----SR--------------EWGY-VDG-ELRSQALFNHPTSIAYDMKR 413 (433)
T ss_dssp EEETTTTE-----EEEECTTSEEEEEECCCT----TC--------------SSCC-BCE-ETTTTCBCSSEEEEEEETTT
T ss_pred EEECCCCE-----EEEECCCCCEEEEEeCCC----CC--------------cccc-CCC-ccccccEeCCCcEEEEECCC
Confidence 99988775 344444443222211100 00 0000 000 00111246678888765 7
Q ss_pred CEEEEecCCCCeEEEecc
Q 046018 290 GQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 290 g~l~vgs~~~~~i~~~~~ 307 (310)
|.|||+...+++|.++++
T Consensus 414 g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 414 KCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp TEEEEEEGGGTEEEEEEE
T ss_pred CEEEEEeCCCCEEEEEec
Confidence 999999999999999875
No 11
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.81 E-value=1.1e-17 Score=147.20 Aligned_cols=169 Identities=17% Similarity=0.165 Sum_probs=125.2
Q ss_pred eccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCC
Q 046018 27 TTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKG 105 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~ 105 (310)
..+.+++..+...+.+......|.+|++|+.++.||+++... .|++++++++..+.+... ....|.+|++|+.++
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~----~~~~p~glavd~~~g 128 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST----GLESPGGLAVDWVHD 128 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----SCSCCCEEEEETTTT
T ss_pred cceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC----CCCCccEEEEecCCC
Confidence 445666666644344444557799999997689999999874 599999998765544322 335789999998555
Q ss_pred EEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecCC-ceEEEEEccC
Q 046018 106 VIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETSN-CRILRFWLHG 183 (310)
Q Consensus 106 ~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~~-~~i~~~~~~~ 183 (310)
.||+++.. .++|.++++++...+.+. ..+..|++|+++|+++.|||++..+ ++|+++++++
T Consensus 129 ~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 129 KLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp EEEEEETT-----------------TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eEEEEcCC-----------------CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 59999954 568999998865444444 4567899999999888899999988 9999999986
Q ss_pred CCCCcceeee-eCCCCCCeeEECC-CCCEEEEEecCCc
Q 046018 184 PNSGKQDVFA-ELPGFPDNVRSNS-NGEFWVALHAKKG 219 (310)
Q Consensus 184 ~~~~~~~~~~-~~~~~p~~i~~d~-~G~l~va~~~~~~ 219 (310)
.. ...+. ..-..|+++++|+ +++||+++...+.
T Consensus 192 ~~---~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~ 226 (349)
T 3v64_C 192 SG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 226 (349)
T ss_dssp CS---CEESCCSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CC---cEEEEECCCCCcceEEEeCCCCEEEEEECCCCE
Confidence 42 22222 2235699999995 6789999877653
No 12
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.80 E-value=2.2e-17 Score=147.37 Aligned_cols=169 Identities=17% Similarity=0.165 Sum_probs=125.9
Q ss_pred eccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCC
Q 046018 27 TTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKG 105 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~ 105 (310)
..|.+++..+.....+......|.+|++|+.++.||+++... .|++++++++..+.+... ....|.+|++|+.++
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~----~~~~p~glavd~~~g 171 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST----GLESPGGLAVDWVHD 171 (386)
T ss_dssp SCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS----SCSCCCCEEEETTTT
T ss_pred ccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC----CCCCccEEEEEeCCC
Confidence 455666666644444455567899999997688999999874 599999998766554332 345799999998655
Q ss_pred EEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecCC-ceEEEEEccC
Q 046018 106 VIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETSN-CRILRFWLHG 183 (310)
Q Consensus 106 ~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~~-~~i~~~~~~~ 183 (310)
.||+++.. .++|.++++++...+.+. ..+..|++|+++|+++.|||++... ++|+++++++
T Consensus 172 ~lY~~d~~-----------------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 172 KLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp EEEEEETT-----------------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eEEEEcCC-----------------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 59999964 568999998765444443 4567899999999888899999888 8999999986
Q ss_pred CCCCcceeee-eCCCCCCeeEECC-CCCEEEEEecCCc
Q 046018 184 PNSGKQDVFA-ELPGFPDNVRSNS-NGEFWVALHAKKG 219 (310)
Q Consensus 184 ~~~~~~~~~~-~~~~~p~~i~~d~-~G~l~va~~~~~~ 219 (310)
.. ...+. .....|++|++|+ +++||+++...+.
T Consensus 235 ~~---~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~ 269 (386)
T 3v65_B 235 SG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 269 (386)
T ss_dssp CS---CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE
T ss_pred CC---cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE
Confidence 42 22232 2235699999994 6789999877653
No 13
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.80 E-value=3.4e-17 Score=142.27 Aligned_cols=151 Identities=11% Similarity=0.145 Sum_probs=110.6
Q ss_pred ccceeceEEEeCCCCcEEEEECCC-ceEEEeCCC----CeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhh
Q 046018 45 ICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEG----GLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRR 119 (310)
Q Consensus 45 ~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~----~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~ 119 (310)
....|.|+++++.+++||+++... .|+++++++ ...+.+.. .....|.+|++|+.++.||+++..
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~----~~~~~p~glavd~~~~~ly~~d~~------ 97 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDIQAPDGLAVDWIHSNIYWTDSV------ 97 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----SSCSCCCEEEEETTTTEEEEEETT------
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe----CCCCCcCEEEEeecCCeEEEEECC------
Confidence 346899999998678999999874 599999886 22222321 134579999999754449999854
Q ss_pred hhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecCC-ceEEEEEccCCCCCcceeeee-CC
Q 046018 120 QFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETSN-CRILRFWLHGPNSGKQDVFAE-LP 196 (310)
Q Consensus 120 ~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~~-~~i~~~~~~~~~~~~~~~~~~-~~ 196 (310)
.++|.++++++...+.+. ..+..|++|+++|+++.|||++... ++|+++++++.. ...+.. .-
T Consensus 98 -----------~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~---~~~~~~~~~ 163 (316)
T 1ijq_A 98 -----------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENI 163 (316)
T ss_dssp -----------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---EEEEECSSC
T ss_pred -----------CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC---eEEEEECCC
Confidence 678999999866555544 3567899999999888899999875 899999998642 222322 23
Q ss_pred CCCCeeEECCC-CCEEEEEecCCc
Q 046018 197 GFPDNVRSNSN-GEFWVALHAKKG 219 (310)
Q Consensus 197 ~~p~~i~~d~~-G~l~va~~~~~~ 219 (310)
..|+++++|++ ++||+++...+.
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEeccCCEEEEEECCCCe
Confidence 57999999964 689999876653
No 14
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.80 E-value=7.4e-18 Score=146.86 Aligned_cols=211 Identities=18% Similarity=0.220 Sum_probs=145.9
Q ss_pred EEEEeCCCCCeE-EEEEeccccccccCCCCCccc-cccceeceEEEeCCCCcEEEEECCC-----ceEEEeCCCCeEEEE
Q 046018 11 ILKWQGDELGWT-EFAVTTSQRKECVRPFAPDIE-HICGRPLGIRFDKKTGDLYIADAYL-----GFQVVGPEGGLATQL 83 (310)
Q Consensus 11 i~~~~~~~~~W~-~~~~~~~~~~~~~~~~~~~~~-~~~~~p~gl~~d~~~g~l~v~~~~~-----gi~~~d~~~~~~~~~ 83 (310)
-..|+++..-|+ +....++.+++..+.++..+. .....|.+|++++ +|+||++.... +|+++|+++++++.+
T Consensus 49 ~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEE
T ss_pred CcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEE
Confidence 445665443364 455667888887764433332 2346789999999 89999998765 699999998876644
Q ss_pred EeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCC
Q 046018 84 VTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDR 163 (310)
Q Consensus 84 ~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~ 163 (310)
... ......+++++++++|+ +|+++.... .....+.|+++++++++.+.+......|++++++||+
T Consensus 128 ~~~--~~~~~~~~~i~~d~~g~-l~v~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg 193 (333)
T 2dg1_A 128 IED--LSTAYCIDDMVFDSKGG-FYFTDFRGY-----------STNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDE 193 (333)
T ss_dssp ECS--SSSCCCEEEEEECTTSC-EEEEECCCB-----------TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTS
T ss_pred Ecc--CccCCcccceEECCCCC-EEEEecccc-----------ccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCC
Confidence 321 11234689999999999 999985310 0112568999999877776665555678999999999
Q ss_pred CeEEEEecCCceEEEEEccC--CCCCcc--eeeeeCC--CCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEee
Q 046018 164 TFILIAETSNCRILRFWLHG--PNSGKQ--DVFAELP--GFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLK 237 (310)
Q Consensus 164 ~~lyv~~~~~~~i~~~~~~~--~~~~~~--~~~~~~~--~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~ 237 (310)
+.||+++...++|++|+.+. ...... ..+...+ ..|+++++|++|+||+++...+. +.++++.++.+..
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~-----v~~~d~~g~~~~~ 268 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGR-----VLVFNKRGYPIGQ 268 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTE-----EEEECTTSCEEEE
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCE-----EEEECCCCCEEEE
Confidence 98999988889999999853 211111 1122222 36899999999999999987554 5555556666655
Q ss_pred ccch
Q 046018 238 LPLS 241 (310)
Q Consensus 238 ~~~~ 241 (310)
+..+
T Consensus 269 ~~~~ 272 (333)
T 2dg1_A 269 ILIP 272 (333)
T ss_dssp EECT
T ss_pred EEcC
Confidence 5443
No 15
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.80 E-value=6.6e-18 Score=142.60 Aligned_cols=228 Identities=18% Similarity=0.216 Sum_probs=149.7
Q ss_pred EEEeCCCCCeE-E-EEEeccccccccCCCCCccc-cccceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecC
Q 046018 12 LKWQGDELGWT-E-FAVTTSQRKECVRPFAPDIE-HICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAA 88 (310)
Q Consensus 12 ~~~~~~~~~W~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~ 88 (310)
..++++..-|+ . .....+.+++..+....... .....|.+|++++ +|+||+++..++|+++|+++.....+.
T Consensus 29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~i~~~d~~~~~~~~~~---- 103 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDFNNRVVTLAAGSNNQTVLP---- 103 (270)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEETTTEEEEECTTCSCCEECC----
T ss_pred eEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcCCCEEEEEeCCCceEeeee----
Confidence 34444332377 4 34456777776553322211 1225789999999 889999998556999999877654331
Q ss_pred CccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEE
Q 046018 89 GQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFIL 167 (310)
Q Consensus 89 ~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~ly 167 (310)
......|++|+++++|+ +|+++.. .+.|++++..+....... .....|++|+++++++ +|
T Consensus 104 ~~~~~~p~~i~~~~~g~-l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~ 164 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGA-VYVADRG-----------------NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VY 164 (270)
T ss_dssp CCSCSSEEEEEECTTCC-EEEEEGG-----------------GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EE
T ss_pred cCCcCCCcceEECCCCC-EEEEECC-----------------CCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EE
Confidence 12234789999999999 9999843 568999987654333222 3345799999999997 99
Q ss_pred EEecCCceEEEEEccCCCCCcceeeeeC-CCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEeeccchhhhhc
Q 046018 168 IAETSNCRILRFWLHGPNSGKQDVFAEL-PGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLH 246 (310)
Q Consensus 168 v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~ 246 (310)
+++..+++|.+|+.++... ...... ...|.++++|++|+||+++..++. +
T Consensus 165 v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~-----v--------------------- 215 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNNQ---VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ-----V--------------------- 215 (270)
T ss_dssp EEEGGGTEEEEECTTTCCE---EECCCSSCCSEEEEEECTTCCEEEEETTTSC-----E---------------------
T ss_pred EEECCCCEEEEEecCCCce---EeecccCCCCceEEEECCCCCEEEEECCCCc-----E---------------------
Confidence 9998889999999875321 111111 156899999999999999976654 2
Q ss_pred ccccCCCCceEEEEECCCCCEEEEEEcCCCCeecceeEEEEe-CCEEEEecCCCCeEEEecc
Q 046018 247 SLLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFISEVEEK-DGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 247 ~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~l~vgs~~~~~i~~~~~ 307 (310)
.++++++....... ..+ +..+..++.. +|+||+++..+++|.++++
T Consensus 216 ------------~~~~~~~~~~~~~~-~~~--~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 216 ------------VKLLAGSTTSTVLP-FTG--LNTPLAVAVDSDRTVYVADRGNDRVVKLTS 262 (270)
T ss_dssp ------------EEECTTCSCCEECC-CCS--CSCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred ------------EEEcCCCCcceeec-cCC--CCCceeEEECCCCCEEEEECCCCEEEEEcC
Confidence 34444443322211 111 2345666543 6789999988899998875
No 16
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.80 E-value=6.2e-17 Score=138.29 Aligned_cols=257 Identities=15% Similarity=0.150 Sum_probs=168.7
Q ss_pred EEEEeCCCCC--eEEEE-EeccccccccCCCCCccc--cccceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEE
Q 046018 11 ILKWQGDELG--WTEFA-VTTSQRKECVRPFAPDIE--HICGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLV 84 (310)
Q Consensus 11 i~~~~~~~~~--W~~~~-~~~~~~~~~~~~~~~~~~--~~~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~ 84 (310)
...+..++++ |+... ..++.+++..+ .+.... .....|.+|++++ +|+||+++.. .+|+++|++ ++.+.+.
T Consensus 22 p~~i~~d~~g~l~v~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~~~~~ 98 (300)
T 2qc5_A 22 PYGITSSEDGKVWFTQHKANKISSLDQSG-RIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGFTEYP 98 (300)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTS-CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred cceeeECCCCCEEEEcCCCCeEEEECCCC-ceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCC-CCeEEec
Confidence 4444444444 88653 35677777663 222221 1236789999998 8999999986 459999998 5554442
Q ss_pred eecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe--cCCcccceEEEecC
Q 046018 85 TEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL--QGLAFANGVALSRD 162 (310)
Q Consensus 85 ~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~~~gi~~~~d 162 (310)
.. .....|.+|+++++|+ +|+++.. .+.|++++++ ++..... .....|++++++++
T Consensus 99 ~~---~~~~~~~~i~~~~~g~-l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 99 LP---QPDSGPYGITEGLNGD-IWFTQLN-----------------GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp CS---STTCCEEEEEECSTTC-EEEEETT-----------------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred CC---CCCCCCccceECCCCC-EEEEccC-----------------CCeEEEECCC-CCEEEccCCCCCCCceeEEECCC
Confidence 21 1235789999999999 9999853 5689999998 6665432 23567899999999
Q ss_pred CCeEEEEecCCceEEEEEccCCCCCcceeeee--CCCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEee-cc
Q 046018 163 RTFILIAETSNCRILRFWLHGPNSGKQDVFAE--LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLK-LP 239 (310)
Q Consensus 163 ~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~-~~ 239 (310)
++ ||+++..++.|+++++++. ...+.. ....|.++++|++|+||+++...+. +..+++.++.... .+
T Consensus 157 g~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-----i~~~~~~g~~~~~~~~ 226 (300)
T 2qc5_A 157 NA-LWFTENQNNSIGRITNTGK----LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK-----IGRITTTGEISEYDIP 226 (300)
T ss_dssp SS-EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-----EEEECTTCCEEEEECS
T ss_pred CC-EEEEecCCCeEEEECCCCc----EEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-----EEEEcCCCcEEEEECC
Confidence 98 9999888899999987432 222211 1246889999999999999987655 5666656655432 22
Q ss_pred chhhhhcccccCCC--------CceEEEEECCCCCEEEEEEcCCCCeecceeEEEE-eCCEEEEecCCCCeEEEecc
Q 046018 240 LSFRQLHSLLVGGK--------PHATAIKLSEKGEVLEVLEDCEGKTLSFISEVEE-KDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 240 ~~~~~~~~~~~~~~--------~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~l~vgs~~~~~i~~~~~ 307 (310)
.....+.++++... ....+.++++++++. .+..+.+ ...+..++. .+|+||+++. + +|.+++.
T Consensus 227 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 227 TPNARPHAITAGKNSEIWFTEWGANQIGRITNDNTIQ-EYQLQTE--NAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp STTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEE-EEECCST--TCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCCCCceEEEECCCCCEEEeccCCCeEEEECCCCcEE-EEECCcc--CCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 22233344443322 223556677766554 3333322 123555554 4789999998 6 9999875
No 17
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.79 E-value=3.8e-18 Score=150.30 Aligned_cols=201 Identities=17% Similarity=0.201 Sum_probs=145.7
Q ss_pred EEEEEeCCCCC--eEEEEEeccccccccCCCCCcc-ccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEe
Q 046018 10 RILKWQGDELG--WTEFAVTTSQRKECVRPFAPDI-EHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVT 85 (310)
Q Consensus 10 ~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~ 85 (310)
....|+...+. |++.....|.+++..+...+.+ ......|.||++|+.+++||+++... .|.++++++...+.+..
T Consensus 76 ~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~ 155 (349)
T 3v64_C 76 IALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 155 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred EEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe
Confidence 44567765555 8888778888888776432222 22346799999997688999999874 59999998765444432
Q ss_pred ecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCC
Q 046018 86 EAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRT 164 (310)
Q Consensus 86 ~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~ 164 (310)
.....|++|++||.+.+||+++.. ..++|+++++++...+.+. ..+..|+||+++++++
T Consensus 156 ----~~l~~P~~iavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~ 215 (349)
T 3v64_C 156 ----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGR 215 (349)
T ss_dssp ----TTCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTT
T ss_pred ----CCCCCcceEEEecCcCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCC
Confidence 234579999999865569999954 1378999999865555443 4577899999999888
Q ss_pred eEEEEecCCceEEEEEccCCCCCcceeeee-CCCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeecc
Q 046018 165 FILIAETSNCRILRFWLHGPNSGKQDVFAE-LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLP 239 (310)
Q Consensus 165 ~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~ 239 (310)
+|||+++.+++|+++++++.. ...+.. ....|++|+++ +|+||++++..+. |...+ .+|+....+.
T Consensus 216 ~lY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~~~~-----V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 216 RMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWHTKS-----INSANKFTGKNQEIIR 283 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETTTTE-----EEEEETTTCCSCEEEE
T ss_pred EEEEEECCCCEEEEEeCCCCc---eEEEEeCCCCCceEEEEE-CCEEEEecCCCCe-----EEEEEccCCCccEEec
Confidence 899999999999999998642 222322 23579999995 5789999998876 44443 5666544443
No 18
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.79 E-value=5.9e-17 Score=137.10 Aligned_cols=196 Identities=17% Similarity=0.205 Sum_probs=136.8
Q ss_pred cceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
..+|+++++|+++++||+++... .|.+++++++..+.+.. .....|++|+++++++.||+++..
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----~~~~~p~~ia~d~~~~~lyv~d~~----------- 99 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR----QDLGSPEGIALDHLGRTIFWTDSQ----------- 99 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC----TTCCCEEEEEEETTTTEEEEEETT-----------
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE----CCCCCccEEEEEecCCeEEEEECC-----------
Confidence 35789999998678999999875 59999998776544432 123579999999975559999954
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecC--CceEEEEEccCCCCCcceeeee-CCCCCC
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETS--NCRILRFWLHGPNSGKQDVFAE-LPGFPD 200 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~--~~~i~~~~~~~~~~~~~~~~~~-~~~~p~ 200 (310)
.++|.++++++...+.+. .....|++|+++|++++|||++.. +++|+++++++.. ...+.. ....|.
T Consensus 100 ------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~---~~~~~~~~~~~P~ 170 (267)
T 1npe_A 100 ------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN---RRILAQDNLGLPN 170 (267)
T ss_dssp ------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC---CEEEECTTCSCEE
T ss_pred ------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC---cEEEEECCCCCCc
Confidence 678999998765444443 345789999999987889999976 6799999988642 222322 225799
Q ss_pred eeEECCC-CCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCCCceEEEEECCCCCEEEEEEcCCCCee
Q 046018 201 NVRSNSN-GEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGKPHATAIKLSEKGEVLEVLEDCEGKTL 279 (310)
Q Consensus 201 ~i~~d~~-G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~ 279 (310)
++++|++ ++||+++...+. |. +++.++.....+.. + .
T Consensus 171 gia~d~~~~~lyv~d~~~~~-----I~---------------------------------~~~~~g~~~~~~~~--~--~ 208 (267)
T 1npe_A 171 GLTFDAFSSQLCWVDAGTHR-----AE---------------------------------CLNPAQPGRRKVLE--G--L 208 (267)
T ss_dssp EEEEETTTTEEEEEETTTTE-----EE---------------------------------EEETTEEEEEEEEE--C--C
T ss_pred EEEEcCCCCEEEEEECCCCE-----EE---------------------------------EEecCCCceEEEec--C--C
Confidence 9999996 579999877664 22 23333322222211 1 1
Q ss_pred cceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 280 SFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 280 ~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
..+..++..++.||+++..+++|.+++.
T Consensus 209 ~~P~gi~~d~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 209 QYPFAVTSYGKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp CSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEeCCEEEEEECCCCeEEEEeC
Confidence 2344555567788888887788888775
No 19
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.79 E-value=1.3e-16 Score=136.13 Aligned_cols=260 Identities=11% Similarity=0.118 Sum_probs=169.0
Q ss_pred EEEEEeCCCCC--eEEEE-EeccccccccCCCCCccc--cccceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEE
Q 046018 10 RILKWQGDELG--WTEFA-VTTSQRKECVRPFAPDIE--HICGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQL 83 (310)
Q Consensus 10 ~i~~~~~~~~~--W~~~~-~~~~~~~~~~~~~~~~~~--~~~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~ 83 (310)
.+..+..++++ |+... ..++.+++..+ .+.... .....|.+|++++ +|+||+++.. ++|++++++ ++++.+
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~ 92 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLDG-KITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKK-GIIKEY 92 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCCC-CeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCC-CcEEEE
Confidence 45566555555 98665 35678887763 333222 1236789999999 8999999885 459999987 444444
Q ss_pred EeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe--cCCcccceEEEec
Q 046018 84 VTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL--QGLAFANGVALSR 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~~~gi~~~~ 161 (310)
. .+ .....|.+|+++++|+ +|+++.. .+.|+++|+ +++..... .....|+++++++
T Consensus 93 ~-~~--~~~~~~~~i~~~~~g~-l~v~~~~-----------------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~ 150 (299)
T 2z2n_A 93 T-LP--NPDSAPYGITEGPNGD-IWFTEMN-----------------GNRIGRITD-DGKIREYELPNKGSYPSFITLGS 150 (299)
T ss_dssp E-CS--STTCCEEEEEECTTSC-EEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECT
T ss_pred e-CC--CcCCCceeeEECCCCC-EEEEecC-----------------CceEEEECC-CCCEEEecCCCCCCCCceEEEcC
Confidence 2 11 1234789999999999 9999843 568999999 56665443 2345689999999
Q ss_pred CCCeEEEEecCCceEEEEEccCCCCCcceeee--eCCCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEee-c
Q 046018 162 DRTFILIAETSNCRILRFWLHGPNSGKQDVFA--ELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLK-L 238 (310)
Q Consensus 162 d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~-~ 238 (310)
+++ +|+++..++.|+++++++. ...+. .....|.++++|++|+||+++...+. +..+++.++.... .
T Consensus 151 ~g~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-----i~~~~~~g~~~~~~~ 220 (299)
T 2z2n_A 151 DNA-LWFTENQNNAIGRITESGD----ITEFKIPTPASGPVGITKGNDDALWFVEIIGNK-----IGRITTSGEITEFKI 220 (299)
T ss_dssp TSC-EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-----EEEECTTCCEEEEEC
T ss_pred CCC-EEEEeCCCCEEEEEcCCCc----EEEeeCCCCCCcceeEEECCCCCEEEEccCCce-----EEEECCCCcEEEEEC
Confidence 986 9999888889999987321 22221 12245889999999999999976554 5555556654332 2
Q ss_pred cchhhhhcccccCCC--------CceEEEEECCCCCEEEEEEcCCCCeecceeEEEEeCCEEEEecCCCCeEEEeccc
Q 046018 239 PLSFRQLHSLLVGGK--------PHATAIKLSEKGEVLEVLEDCEGKTLSFISEVEEKDGQLWMGSVLMPFIGIYNRF 308 (310)
Q Consensus 239 ~~~~~~~~~~~~~~~--------~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~~ 308 (310)
+.+...+.++.+... ....+.+++++++ +..+..+.+ ...+..++..+|+||+++. .++|.+++.-
T Consensus 221 ~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~~~--~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 221 PTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNNI-IEEYPIQIK--SAEPHGICFDGETIWFAME-CDKIGKLTLI 294 (299)
T ss_dssp SSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTTE-EEEEECSSS--SCCEEEEEECSSCEEEEET-TTEEEEEEEC
T ss_pred CCCCCCceeEEECCCCCEEEeccCCceEEEECCCCc-eEEEeCCCC--CCccceEEecCCCEEEEec-CCcEEEEEcC
Confidence 222233334433322 2234556666554 334433222 1335555447889999986 7899998753
No 20
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.79 E-value=4.3e-17 Score=147.42 Aligned_cols=234 Identities=14% Similarity=0.157 Sum_probs=156.9
Q ss_pred EEEEeCC-CCC-eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCc-EEEEECCC-----ceEEEeCCCCeE--
Q 046018 11 ILKWQGD-ELG-WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGD-LYIADAYL-----GFQVVGPEGGLA-- 80 (310)
Q Consensus 11 i~~~~~~-~~~-W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~-l~v~~~~~-----gi~~~d~~~~~~-- 80 (310)
-..++++ .+. |+......+.+++..+.....+......|.+|++++ +|+ ||+++... .++.++.++...
T Consensus 141 ~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~ 219 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTRESGFKVI 219 (430)
T ss_dssp EEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEGGGTSCSE
T ss_pred EEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeCCCceeee
Confidence 3456652 333 553333567777776633333344557899999999 666 99999742 366677765432
Q ss_pred EEEEeecCCccccCCcceEEeC-CCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe--cCCcccceE
Q 046018 81 TQLVTEAAGQPLRFTNDLDIDE-HKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL--QGLAFANGV 157 (310)
Q Consensus 81 ~~~~~~~~~~~~~~~~~i~~d~-~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~~~gi 157 (310)
..+. ....|++++++| +|+ ||+++.. .++|++++++++....+. .....|++|
T Consensus 220 ~~l~------~~~~p~giavdp~~g~-lyv~d~~-----------------~~~V~~~~~~~~~~~~~~~~~~~~~P~gi 275 (430)
T 3tc9_A 220 TELT------KGQNCNGAETHPINGE-LYFNSWN-----------------AGQVFRYDFTTQETTPLFTIQDSGWEFHI 275 (430)
T ss_dssp EEEE------ECSSCCCEEECTTTCC-EEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSSCCEEE
T ss_pred eeec------cCCCceEEEEeCCCCE-EEEEECC-----------------CCEEEEEECCCCcEEEEEEcCCCCcceeE
Confidence 1221 245799999999 788 9999954 678999999877663332 233569999
Q ss_pred EEecCCCeEEEEecCCceEEEEEccCC--CCCcceeeeeC---------------CCCCC-eeEE--------CCCCCEE
Q 046018 158 ALSRDRTFILIAETSNCRILRFWLHGP--NSGKQDVFAEL---------------PGFPD-NVRS--------NSNGEFW 211 (310)
Q Consensus 158 ~~~~d~~~lyv~~~~~~~i~~~~~~~~--~~~~~~~~~~~---------------~~~p~-~i~~--------d~~G~l~ 211 (310)
+++|++++||+++..+++|++++.++. .......+... -..|. ++++ |++|+||
T Consensus 276 a~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~ly 355 (430)
T 3tc9_A 276 QFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFY 355 (430)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEE
T ss_pred EEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEE
Confidence 999999999999999999999998752 11111222211 12477 7887 5679999
Q ss_pred EEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCCCceEEEEECCCCCEEEEEEcC--------CC-----Ce
Q 046018 212 VALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGKPHATAIKLSEKGEVLEVLEDC--------EG-----KT 278 (310)
Q Consensus 212 va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~--------~g-----~~ 278 (310)
|++..++. | .+++++|++....... +| ..
T Consensus 356 vaD~~n~~-----I---------------------------------~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~ 397 (430)
T 3tc9_A 356 FCDRENHC-----I---------------------------------RILTPQGRVTTFAGRGSNGTSGYNDGDLRQEAR 397 (430)
T ss_dssp EEEGGGTE-----E---------------------------------EEECTTSEEEEEEECCTTSSSSCBCEETTTTCB
T ss_pred EEECCCcE-----E---------------------------------EEECCCCcEEEEEeCCCCCCCcccCCCchhhcE
Confidence 99988764 2 3344444333332210 11 23
Q ss_pred ecceeEEEEe--CCEEEEecCCCCeEEEecc
Q 046018 279 LSFISEVEEK--DGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 279 ~~~~~~~~~~--~g~l~vgs~~~~~i~~~~~ 307 (310)
+..+..++.. ++.|||+...+++|.++++
T Consensus 398 ~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 398 FNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp CSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred eCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 5678888765 5899999999999999875
No 21
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.79 E-value=3.9e-18 Score=148.12 Aligned_cols=202 Identities=17% Similarity=0.188 Sum_probs=145.4
Q ss_pred cEEEEEeCCCCC--eEEEEEeccccccccCCCCC--ccccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEE
Q 046018 9 GRILKWQGDELG--WTEFAVTTSQRKECVRPFAP--DIEHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQL 83 (310)
Q Consensus 9 ~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~ 83 (310)
.....|+...+. |++.....|.+++..+.... ........|.||++|+.+++||+++... .|.++++++...+.+
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l 116 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL 116 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEE
Confidence 345567765555 89888888888877664211 1222346899999997688999999874 599999987655444
Q ss_pred EeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEE-ecCCcccceEEEecC
Q 046018 84 VTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTIL-LQGLAFANGVALSRD 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-~~~~~~~~gi~~~~d 162 (310)
.. .....|++|++||.+.+||+++.. ..+.|+++++++...+.+ ...+..|+||+++++
T Consensus 117 ~~----~~~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~ 176 (318)
T 3sov_A 117 FW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYE 176 (318)
T ss_dssp EC----SSCSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEEETT
T ss_pred Ee----CCCCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEEcCCCCeEEEEECCCCCccEEEEecc
Confidence 32 234579999999865559999853 257899999985544444 356778999999998
Q ss_pred CCeEEEEecCCceEEEEEccCCCCCcceeeee-CCCCCCeeEECCCCCEEEEEecCCccceeeeeeccc-cccEEeecc
Q 046018 163 RTFILIAETSNCRILRFWLHGPNSGKQDVFAE-LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSW-LGKTLLKLP 239 (310)
Q Consensus 163 ~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~-~g~~~~~~~ 239 (310)
++.|||+++.+++|+++++++.. .+.+.. ....|++++++. +.+|++++..+. |..+++ +|+....+.
T Consensus 177 ~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~glav~~-~~lywtd~~~~~-----V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 177 EQKLYWADAKLNFIHKSNLDGTN---RQAVVKGSLPHPFALTLFE-DILYWTDWSTHS-----ILACNKYTGEGLREIH 246 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCS---CEEEECSCCSCEEEEEEET-TEEEEEETTTTE-----EEEEETTTCCSCEEEE
T ss_pred CCEEEEEECCCCEEEEEcCCCCc---eEEEecCCCCCceEEEEeC-CEEEEEecCCCe-----EEEEECCCCCceEEEe
Confidence 88899999999999999998642 233333 336799999985 568888887775 455544 566544443
No 22
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.78 E-value=5.3e-18 Score=151.37 Aligned_cols=202 Identities=17% Similarity=0.195 Sum_probs=145.7
Q ss_pred EEEEEeCCCCC--eEEEEEeccccccccCCCCCcc-ccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEe
Q 046018 10 RILKWQGDELG--WTEFAVTTSQRKECVRPFAPDI-EHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVT 85 (310)
Q Consensus 10 ~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~ 85 (310)
....|+...+. |++.....|.+++..+...+.+ ......|.||++|+..++||+++... .|.++++++...+.+..
T Consensus 119 ~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~ 198 (386)
T 3v65_B 119 IALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW 198 (386)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC
T ss_pred EEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec
Confidence 44567765555 8887777888888766332222 22346899999997688999999874 59999998765444432
Q ss_pred ecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCC
Q 046018 86 EAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRT 164 (310)
Q Consensus 86 ~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~ 164 (310)
..+..|++|++||++.+||+++.. ..++|+++++++...+.+. ..+..|+||+++++++
T Consensus 199 ----~~l~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~ 258 (386)
T 3v65_B 199 ----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGR 258 (386)
T ss_dssp ----SSCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGT
T ss_pred ----CCCCCCcEEEEEcCCCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCC
Confidence 234579999999876669999854 1378999999865544443 5577799999999888
Q ss_pred eEEEEecCCceEEEEEccCCCCCcceeeee-CCCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeeccc
Q 046018 165 FILIAETSNCRILRFWLHGPNSGKQDVFAE-LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPL 240 (310)
Q Consensus 165 ~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~ 240 (310)
+|||+++.+++|+++++++.. ...+.. ....|++|+++ ++.||++++..+. |.+++ .+|+....+..
T Consensus 259 ~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~~~~-----V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 259 RMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWHTKS-----INSANKFTGKNQEIIRN 327 (386)
T ss_dssp EEEEEETTTTEEEEECTTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETTTTE-----EEEEETTTCCSCEEEEC
T ss_pred EEEEEECCCCEEEEEeCCCCe---eEEEEECCCCCceEEEEE-CCEEEEeeCCCCe-----EEEEECCCCcceEEEcc
Confidence 899999999999999988632 222322 23579999995 5789999988776 45544 56665555443
No 23
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=1.2e-16 Score=136.14 Aligned_cols=221 Identities=17% Similarity=0.212 Sum_probs=146.6
Q ss_pred eEEE-EEeccccccccCCCCCccc------cccceeceEEEeCCCCcEEEEEC--CCceEEEeCCCCeEEEEEeecCCcc
Q 046018 21 WTEF-AVTTSQRKECVRPFAPDIE------HICGRPLGIRFDKKTGDLYIADA--YLGFQVVGPEGGLATQLVTEAAGQP 91 (310)
Q Consensus 21 W~~~-~~~~~~~~~~~~~~~~~~~------~~~~~p~gl~~d~~~g~l~v~~~--~~gi~~~d~~~~~~~~~~~~~~~~~ 91 (310)
|+.. ....+.+++..+.....+. .....|.+++++..+|+||+++. ...|.++|+++..+..+ . ...
T Consensus 44 ~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~-~---~~~ 119 (286)
T 1q7f_A 44 IVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKF-G---ATI 119 (286)
T ss_dssp EEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEE-C---TTT
T ss_pred EEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEe-c---Ccc
Confidence 6643 2345666776552211111 11247889999533899999996 35699999775544333 1 123
Q ss_pred ccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe--cCCcccceEEEecCCCeEEEE
Q 046018 92 LRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL--QGLAFANGVALSRDRTFILIA 169 (310)
Q Consensus 92 ~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~~~gi~~~~d~~~lyv~ 169 (310)
...|++|+++++|+ +|+++.. .+.|++|++++.....+. .....|++|+++++++ +|++
T Consensus 120 ~~~~~~i~~~~~g~-l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~ 180 (286)
T 1q7f_A 120 LQHPRGVTVDNKGR-IIVVECK-----------------VMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-IFIS 180 (286)
T ss_dssp CSCEEEEEECTTSC-EEEEETT-----------------TTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-EEEE
T ss_pred CCCceEEEEeCCCC-EEEEECC-----------------CCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-EEEE
Confidence 35789999999999 9999854 678999998755444443 2345699999999987 9999
Q ss_pred ecCCceEEEEEccCCCCCcceeeeeC--CCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcc
Q 046018 170 ETSNCRILRFWLHGPNSGKQDVFAEL--PGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHS 247 (310)
Q Consensus 170 ~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~ 247 (310)
+..+++|.+|++++.. ...+... ...|.++++|++|+||+++..++.
T Consensus 181 ~~~~~~i~~~~~~g~~---~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~---------------------------- 229 (286)
T 1q7f_A 181 DNRAHCVKVFNYEGQY---LRQIGGEGITNYPIGVGINSNGEILIADNHNNF---------------------------- 229 (286)
T ss_dssp EGGGTEEEEEETTCCE---EEEESCTTTSCSEEEEEECTTCCEEEEECSSSC----------------------------
T ss_pred ECCCCEEEEEcCCCCE---EEEEccCCccCCCcEEEECCCCCEEEEeCCCCE----------------------------
Confidence 9889999999986531 1222211 146899999999999999876541
Q ss_pred cccCCCCceEEEEECCCCCEEEEEEcCCCCeecceeEEEE-eCCEEEEecCCCCeEEEecc
Q 046018 248 LLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFISEVEE-KDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 248 ~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~l~vgs~~~~~i~~~~~ 307 (310)
.+..++++|+.+..+..... ...+..++. .+|+||+++. +++|.+++.
T Consensus 230 ---------~i~~~~~~g~~~~~~~~~~~--~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 230 ---------NLTIFTQDGQLISALESKVK--HAQCFDVALMDDGSVVLASK-DYRLYIYRY 278 (286)
T ss_dssp ---------EEEEECTTSCEEEEEEESSC--CSCEEEEEEETTTEEEEEET-TTEEEEEEC
T ss_pred ---------EEEEECCCCCEEEEEcccCC--CCcceeEEECCCCcEEEECC-CCeEEEEEc
Confidence 12345566666555543221 123444443 4678999875 678888764
No 24
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.78 E-value=8.5e-17 Score=144.67 Aligned_cols=235 Identities=12% Similarity=0.077 Sum_probs=148.4
Q ss_pred eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCC--ceEEEeCCCCeEEEEEeecCCccccCCcce
Q 046018 21 WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYL--GFQVVGPEGGLATQLVTEAAGQPLRFTNDL 98 (310)
Q Consensus 21 W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~--gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i 98 (310)
|.+.....+.+++..+.+...+......|. ++++++.+.||+++... .|+++++.++................|+++
T Consensus 146 v~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~i 224 (409)
T 3hrp_A 146 AYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAV 224 (409)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBC
T ss_pred EEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEE
Confidence 444333556677776533233333345677 99999555688888754 699999886653222211111134679999
Q ss_pred EEeC-CCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEE----ecCCc--ccc-eEEEecCCCeEEEEe
Q 046018 99 DIDE-HKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTIL----LQGLA--FAN-GVALSRDRTFILIAE 170 (310)
Q Consensus 99 ~~d~-~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~----~~~~~--~~~-gi~~~~d~~~lyv~~ 170 (310)
+++| +|+ ||+++ ..+.|++||++++....+ ..... .|. +|+++|+++.||+++
T Consensus 225 av~p~~g~-lyv~d------------------~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 225 ALDETEEW-LYFVD------------------SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EECTTSSE-EEEEC------------------TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EEeCCCCe-EEEEE------------------CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 9999 566 99975 267899999988776654 22222 244 999999767799999
Q ss_pred cCCceEEEEEccCCCCCcceeeeeC---------------CCCCCeeEECCCCCEEEEEe-cCCccceeeeeecc-cccc
Q 046018 171 TSNCRILRFWLHGPNSGKQDVFAEL---------------PGFPDNVRSNSNGEFWVALH-AKKGLFGKLILLNS-WLGK 233 (310)
Q Consensus 171 ~~~~~i~~~~~~~~~~~~~~~~~~~---------------~~~p~~i~~d~~G~l~va~~-~~~~~~~~~i~~~~-~~g~ 233 (310)
..+++|++|+.++. ...+... -..|.+|++|++|+||+++. .++. |.+++ +.|+
T Consensus 286 ~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-----I~~~~~~~G~ 356 (409)
T 3hrp_A 286 QNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-----LRKLDILDGY 356 (409)
T ss_dssp TTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-----EEEEETTTTE
T ss_pred CCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-----EEEEECCCCE
Confidence 99999999998753 1111111 13589999999999999998 6664 33333 3333
Q ss_pred EEeeccchhhhhcccccCCCCceEEEEECCCCCEEEEEEcCCCCeecceeEEEEe-CCEEEEecCCCCeEEEecc
Q 046018 234 TLLKLPLSFRQLHSLLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFISEVEEK-DGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~l~vgs~~~~~i~~~~~ 307 (310)
.......+.. .. ..+| .+....+..+..++.. +|.||++...+.+|.++.+
T Consensus 357 v~~~~g~~~~-----------~g-----~~~g-------~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 357 VSTVAGQVDV-----------AS-----QIDG-------TPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEECTTC-----------BS-----CCCB-------STTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEeCCCCC-----------CC-----cCCC-------ChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 2211100000 00 0000 0011235667777765 5999999999999999864
No 25
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.77 E-value=2.2e-17 Score=143.49 Aligned_cols=199 Identities=15% Similarity=0.163 Sum_probs=140.6
Q ss_pred EEEEEeCCCCC--eEEEEEeccccccccC----CCCCccc-cccceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEE
Q 046018 10 RILKWQGDELG--WTEFAVTTSQRKECVR----PFAPDIE-HICGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLAT 81 (310)
Q Consensus 10 ~i~~~~~~~~~--W~~~~~~~~~~~~~~~----~~~~~~~-~~~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~ 81 (310)
.-..|+.+.+. |++.....|.+++..+ .....+. .....|.||++|+.+++||+++.. +.|.++++++...+
T Consensus 33 ~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~ 112 (316)
T 1ijq_A 33 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK 112 (316)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE
T ss_pred EEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceE
Confidence 34566765555 8887777788877654 2212222 233689999999657899999987 45999999877655
Q ss_pred EEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEe
Q 046018 82 QLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALS 160 (310)
Q Consensus 82 ~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~ 160 (310)
.+... ....|++|++||++.+||+++.. ..+.|+++++++...+.+. ..+..|+||+++
T Consensus 113 ~~~~~----~~~~P~~iavdp~~g~ly~~d~~----------------~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d 172 (316)
T 1ijq_A 113 TLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPNGITLD 172 (316)
T ss_dssp EEEEC----TTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECSSCSCEEEEEEE
T ss_pred EEEEC----CCCCcceEEeCCCCCEEEEEccC----------------CCCeEEEEcCCCCCeEEEEECCCCCceEEEEe
Confidence 45432 34579999999865569999853 1378999999865555443 457789999999
Q ss_pred cCCCeEEEEecCCceEEEEEccCCCCCcceeeee---CCCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEe
Q 046018 161 RDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE---LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLL 236 (310)
Q Consensus 161 ~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~ 236 (310)
+++++|||+++.+++|++++.++.. .+.+.. ....|.+|+++. |+||++++..+. |.+++ .+|+...
T Consensus 173 ~~~~~lY~~D~~~~~I~~~d~dg~~---~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~-----V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 173 LLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEA-----IFSANRLTGSDVN 243 (316)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEET-TEEEEEETTTTE-----EEEEETTTCCCCE
T ss_pred ccCCEEEEEECCCCeEEEEecCCCc---eEEEeecCCccCCcEEEEEEC-CEEEEEECCCCe-----EEEEeCCCCcceE
Confidence 9988899999999999999998642 233333 235799999984 889999987776 45554 3555443
Q ss_pred e
Q 046018 237 K 237 (310)
Q Consensus 237 ~ 237 (310)
.
T Consensus 244 ~ 244 (316)
T 1ijq_A 244 L 244 (316)
T ss_dssp E
T ss_pred E
Confidence 3
No 26
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.77 E-value=3e-17 Score=138.90 Aligned_cols=202 Identities=16% Similarity=0.197 Sum_probs=141.0
Q ss_pred EEEEeCCCCC--eEEEEEeccccccccCCCCCccc-cccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEee
Q 046018 11 ILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIE-HICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTE 86 (310)
Q Consensus 11 i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~ 86 (310)
-..|+++.+. |.+.....+.+++..+.....+. .....|++|++++++++||+++... .|.++++++...+.+...
T Consensus 40 gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~ 119 (267)
T 1npe_A 40 GLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT 119 (267)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred EEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC
Confidence 3445654444 66665566777777663322222 2236899999998568999999874 599999987654434321
Q ss_pred cCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCe
Q 046018 87 AAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTF 165 (310)
Q Consensus 87 ~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~ 165 (310)
....|++|++++++.+||+++... ..+.|+++++++...+.+. .....|++|++++++++
T Consensus 120 ----~~~~P~~i~vd~~~g~lyv~~~~~---------------~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~ 180 (267)
T 1npe_A 120 ----GLVNPRGIVTDPVRGNLYWTDWNR---------------DNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQ 180 (267)
T ss_dssp ----SCSSEEEEEEETTTTEEEEEECCS---------------SSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTE
T ss_pred ----CCCCccEEEEeeCCCEEEEEECCC---------------CCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCE
Confidence 235799999999655599998431 1468999998755444443 45667999999999888
Q ss_pred EEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCCccceeeeeeccc-cccEEeeccc
Q 046018 166 ILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSW-LGKTLLKLPL 240 (310)
Q Consensus 166 lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~-~g~~~~~~~~ 240 (310)
|||++..+++|+++++++. ....+......|.++++| +++||++++.++. +..+++ .++.+..++.
T Consensus 181 lyv~d~~~~~I~~~~~~g~---~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~-----v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 181 LCWVDAGTHRAECLNPAQP---GRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNS-----VIAMDLAISKEMDTFHP 247 (267)
T ss_dssp EEEEETTTTEEEEEETTEE---EEEEEEECCCSEEEEEEE-TTEEEEEETTTTE-----EEEEETTTTEEEEEECC
T ss_pred EEEEECCCCEEEEEecCCC---ceEEEecCCCCceEEEEe-CCEEEEEECCCCe-----EEEEeCCCCCceEEEcc
Confidence 9999999999999998753 122233333579999998 6899999988776 455544 5676666653
No 27
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.76 E-value=2.7e-16 Score=140.96 Aligned_cols=219 Identities=12% Similarity=0.141 Sum_probs=144.0
Q ss_pred eccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCC----eEEEEEeecCCccccCCcceEEe
Q 046018 27 TTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGG----LATQLVTEAAGQPLRFTNDLDID 101 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~----~~~~~~~~~~~~~~~~~~~i~~d 101 (310)
..+.+++..+.....+......|.+|++++.++.||+++... .|+++++++. ..+.+.. .....|.+|++|
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~----~~~~~p~glavD 167 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDIQAPDGLAVD 167 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC----SSCSCEEEEEEE
T ss_pred ceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe----CCCCCcccEEEE
Confidence 345555555543344444557899999998788999999874 5999998763 2222322 234579999999
Q ss_pred CCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecC-CceEEEE
Q 046018 102 EHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETS-NCRILRF 179 (310)
Q Consensus 102 ~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~-~~~i~~~ 179 (310)
+.++.||+++.. .++|.++++++...+.+. ..+..|++|+++|.++.|||++.. +++|+++
T Consensus 168 ~~~~~lY~~d~~-----------------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~ 230 (400)
T 3p5b_L 168 WIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 230 (400)
T ss_dssp TTTTEEEEEETT-----------------TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEE
T ss_pred ecCCceEEEECC-----------------CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEE
Confidence 854449999964 678999999876555544 467789999999988889999976 4899999
Q ss_pred EccCCCCCcceeeeeCCCCCCeeEECC-CCCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCCCceEE
Q 046018 180 WLHGPNSGKQDVFAELPGFPDNVRSNS-NGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGKPHATA 258 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
+++|... ...+...-..|.+|++|+ +++||+++...+. |.
T Consensus 231 ~~dG~~~--~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~-----I~-------------------------------- 271 (400)
T 3p5b_L 231 GLNGVDI--YSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-----IS-------------------------------- 271 (400)
T ss_dssp ETTSCSC--EEEECSSCSCEEEEEEETTTTEEEEEETTTTE-----EE--------------------------------
T ss_pred eCCCCcc--EEEEECCCCceEEEEEEeCCCEEEEEECCCCE-----EE--------------------------------
Confidence 9987422 122222225799999995 5689999876553 22
Q ss_pred EEECCCCCEEEEEEcCCCCeecceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 259 IKLSEKGEVLEVLEDCEGKTLSFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 259 ~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
+++.+|...+.+.... ..+..+.++...++.||+..+.+.+|.++++
T Consensus 272 -~~d~dG~~~~~~~~~~-~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 272 -SIDVNGGNRKTILEDE-KRLAHPFSLAVFEDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp -EEETTSCCCEEEEECS-STTSSEEEEEEETTEEEEEESSSCSEEEEES
T ss_pred -EEeCCCCccEEEEeCC-CCCCCCEEEEEeCCEEEEecCCCCeEEEEEc
Confidence 3333333222221111 1123455555567777777777777777764
No 28
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.76 E-value=2.2e-16 Score=153.61 Aligned_cols=266 Identities=11% Similarity=0.127 Sum_probs=178.2
Q ss_pred ccCcEEEEEeCCCCC--eEEEEEeccccccccCCCCCccccc---------cceeceEEEeCCCCc-EEEEECCCceEEE
Q 046018 6 VADGRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEHI---------CGRPLGIRFDKKTGD-LYIADAYLGFQVV 73 (310)
Q Consensus 6 ~~~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~gl~~d~~~g~-l~v~~~~~gi~~~ 73 (310)
+.+..|..+..+.++ |+++...||.+++..+..|...... ...+..|+.|+ +|+ ||+++...||+++
T Consensus 354 l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~ 432 (795)
T 4a2l_A 354 LSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSIL 432 (795)
T ss_dssp CSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEE
T ss_pred CCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEE
Confidence 345678889888777 9988888999999877555443211 23456888888 899 9999988899999
Q ss_pred eCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecC---
Q 046018 74 GPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQG--- 150 (310)
Q Consensus 74 d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--- 150 (310)
|+++++++.+.......+...+.+|+.|++|+ ||+++ .+.|++|++++++++.+...
T Consensus 433 d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwigt-------------------~~Gl~~~~~~~~~~~~~~~~~~~ 492 (795)
T 4a2l_A 433 HRNSGQVENFNQRNSQLVNENVYAILPDGEGN-LWLGT-------------------LSALVRFNPEQRSFTTIEKEKDG 492 (795)
T ss_dssp ETTTCCEEEECTTTSCCSCSCEEEEEECSSSC-EEEEE-------------------SSCEEEEETTTTEEEECCBCTTC
T ss_pred eCCCCcEEEeecCCCCcCCCeeEEEEECCCCC-EEEEe-------------------cCceeEEeCCCCeEEEccccccc
Confidence 99988877664321122334678899999999 99998 34699999998888765322
Q ss_pred --C--cccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee---CC-CCCCeeEECCCCCEEEEEecCCccce
Q 046018 151 --L--AFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE---LP-GFPDNVRSNSNGEFWVALHAKKGLFG 222 (310)
Q Consensus 151 --~--~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~---~~-~~p~~i~~d~~G~l~va~~~~~~~~~ 222 (310)
. .....|+.+++++ ||++.. ++|+++++++... ....... ++ .....++.|++|+||+++.. +
T Consensus 493 ~~~~~~~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-G---- 563 (795)
T 4a2l_A 493 TPVVSKQITTLFRDSHKR-LWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-G---- 563 (795)
T ss_dssp CBCCCCCEEEEEECTTCC-EEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-C----
T ss_pred cccCCceEEEEEECCCCC-EEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-C----
Confidence 1 2245677888887 888754 7899999875422 1100001 11 22356889999999999976 4
Q ss_pred eeeeeccccccEEeeccchhhh----hcc--------cccCCCCceEEEEECCCCCEEEEEEcCCCCeecce--eEEE-E
Q 046018 223 KLILLNSWLGKTLLKLPLSFRQ----LHS--------LLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFI--SEVE-E 287 (310)
Q Consensus 223 ~~i~~~~~~g~~~~~~~~~~~~----~~~--------~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~--~~~~-~ 287 (310)
+.++++....+..+...... ..+ +|++.. ..+.+++++...+..+...+|.+...+ .+++ .
T Consensus 564 --l~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~--~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~ 639 (795)
T 4a2l_A 564 --FYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN--RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRT 639 (795)
T ss_dssp --EEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEET--TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEEC
T ss_pred --ceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcC--CceEEEcCCCCcEEEcCCcCCCccccCccCceeEC
Confidence 56665544444333221111 112 222221 256788988888888877777655554 2333 4
Q ss_pred eCCEEEEecCCCCeEEEecc
Q 046018 288 KDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 288 ~~g~l~vgs~~~~~i~~~~~ 307 (310)
.+|+||+|+ .++|.+|+.
T Consensus 640 ~~G~l~~g~--~~Gl~~~~p 657 (795)
T 4a2l_A 640 SVGQMYFGG--INGITTFRP 657 (795)
T ss_dssp TTSCEEEEE--TTEEEEECG
T ss_pred CCCeEEEec--CCceEEEcH
Confidence 579999999 568888875
No 29
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.75 E-value=2.6e-16 Score=151.46 Aligned_cols=218 Identities=11% Similarity=0.131 Sum_probs=145.5
Q ss_pred ccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCe----EEEEEeecCCccccCCcceEEeC
Q 046018 28 TSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGL----ATQLVTEAAGQPLRFTNDLDIDE 102 (310)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~----~~~~~~~~~~~~~~~~~~i~~d~ 102 (310)
.+.+++........+......|.+|+++..+++||+++... .|+++++++.. .+.++. ..+..|.+||+|+
T Consensus 405 ~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~----~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDIQAPDGLAVDW 480 (791)
T ss_dssp SEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----SSCSCCCEEEEET
T ss_pred ceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe----cCCCCcceeeeee
Confidence 34444444433334444557889999998788999999985 49999887632 222222 2355799999998
Q ss_pred CCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecCC-ceEEEEE
Q 046018 103 HKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETSN-CRILRFW 180 (310)
Q Consensus 103 ~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~~-~~i~~~~ 180 (310)
.++.||+++.. .++|.++++++...+++. ..+..|++|+++|.++.|||++.+. .+|++++
T Consensus 481 ~~~~LY~tD~~-----------------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~ 543 (791)
T 3m0c_C 481 IHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 543 (791)
T ss_dssp TTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred cCCcEEEEecC-----------------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEe
Confidence 87669999965 678999999876655554 4677899999999888899999876 8999999
Q ss_pred ccCCCCCcceeeee-CCCCCCeeEEC-CCCCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCCCceEE
Q 046018 181 LHGPNSGKQDVFAE-LPGFPDNVRSN-SNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGKPHATA 258 (310)
Q Consensus 181 ~~~~~~~~~~~~~~-~~~~p~~i~~d-~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (310)
++|.. ...+.. ....|.+|++| .+|+||+++...+. |
T Consensus 544 ~dG~~---~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~-----I--------------------------------- 582 (791)
T 3m0c_C 544 LNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-----I--------------------------------- 582 (791)
T ss_dssp TTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-----E---------------------------------
T ss_pred cCCCc---eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc-----E---------------------------------
Confidence 98642 222322 23579999999 56789999876553 2
Q ss_pred EEECCCCCEEEEEEcCCCCeecceeEEEEeCCEEEEecCCCCeEEEeccc
Q 046018 259 IKLSEKGEVLEVLEDCEGKTLSFISEVEEKDGQLWMGSVLMPFIGIYNRF 308 (310)
Q Consensus 259 ~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~~ 308 (310)
.+++.+|.....+... +..+..+.++...+++||+....+.+|.+++++
T Consensus 583 ~~~d~dG~~~~~v~~~-~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 583 SSIDVNGGNRKTILED-EKRLAHPFSLAVFEDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp EEEETTSCSCEEEEEC-TTTTSSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred EEEecCCCceEEEecC-CCccCCCCEEEEeCCEEEEEECCCCEEEEEeCC
Confidence 2333333322222211 112334555556677777777777777777653
No 30
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.75 E-value=4.5e-16 Score=135.12 Aligned_cols=150 Identities=17% Similarity=0.154 Sum_probs=112.0
Q ss_pred cceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeE-EEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLA-TQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~-~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~ 123 (310)
...+.+|++++.+++||+++... .|.+++++++.. +.+... ....|.+|++|+.++.||+++..
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~----~l~~p~glavd~~~g~ly~~d~~---------- 99 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS----GLLSPDGLACDWLGEKLYWTDSE---------- 99 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE----CCSCCCEEEEETTTTEEEEEETT----------
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC----CCCCccEEEEEcCCCeEEEEECC----------
Confidence 35788999998778999999875 499999987642 122221 23479999999754449999954
Q ss_pred hhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecC-CceEEEEEccCCCCCcceeee-eCCCCCC
Q 046018 124 SILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETS-NCRILRFWLHGPNSGKQDVFA-ELPGFPD 200 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~-~~~i~~~~~~~~~~~~~~~~~-~~~~~p~ 200 (310)
.++|.++++++...+.+. ..+..|++|+++|.++.|||++.. .++|++++++|.. ...+. ..-..|+
T Consensus 100 -------~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~l~~Pn 169 (318)
T 3sov_A 100 -------TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIINSEIYWPN 169 (318)
T ss_dssp -------TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEE
T ss_pred -------CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEEEECCCCCcc
Confidence 678999999865545444 567789999999987889999965 6899999998642 22222 2225799
Q ss_pred eeEECC-CCCEEEEEecCCc
Q 046018 201 NVRSNS-NGEFWVALHAKKG 219 (310)
Q Consensus 201 ~i~~d~-~G~l~va~~~~~~ 219 (310)
+|++|+ +++||+++...+.
T Consensus 170 glavd~~~~~lY~aD~~~~~ 189 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLNF 189 (318)
T ss_dssp EEEEETTTTEEEEEETTTTE
T ss_pred EEEEeccCCEEEEEECCCCE
Confidence 999997 5789999877654
No 31
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.75 E-value=1e-16 Score=143.73 Aligned_cols=200 Identities=16% Similarity=0.182 Sum_probs=141.6
Q ss_pred EEEEEeCCCCC--eEEEEEeccccccccCC----CCCcc-ccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEE
Q 046018 10 RILKWQGDELG--WTEFAVTTSQRKECVRP----FAPDI-EHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLAT 81 (310)
Q Consensus 10 ~i~~~~~~~~~--W~~~~~~~~~~~~~~~~----~~~~~-~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~ 81 (310)
....|+...+. |++.....|.+++..+. ....+ ......|.||++|+..++||+++... .|.++++++...+
T Consensus 115 ~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~ 194 (400)
T 3p5b_L 115 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK 194 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEE
T ss_pred eEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceE
Confidence 44556665554 88877777777766541 11222 22446899999997688999999874 5999999987665
Q ss_pred EEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEE-ecCCcccceEEEe
Q 046018 82 QLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTIL-LQGLAFANGVALS 160 (310)
Q Consensus 82 ~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-~~~~~~~~gi~~~ 160 (310)
.+... .+..|++|++||.+.+||+++.. ..+.|+++++++...+.+ ...+..|+||+++
T Consensus 195 ~l~~~----~~~~P~~iavdp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd 254 (400)
T 3p5b_L 195 TLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPNGITLD 254 (400)
T ss_dssp EEEEC----SSCCEEEEEEETTTTEEEEEECS----------------SSCCEEEEETTSCSCEEEECSSCSCEEEEEEE
T ss_pred EEEeC----CCCCcceEEEecccCeEEEEeCC----------------CCCEEEEEeCCCCccEEEEECCCCceEEEEEE
Confidence 55432 34579999999965569999854 246799999986554444 3556889999999
Q ss_pred cCCCeEEEEecCCceEEEEEccCCCCCcceeeee---CCCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEe
Q 046018 161 RDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE---LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLL 236 (310)
Q Consensus 161 ~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~ 236 (310)
+++++|||+++..++|+++++++.. ...+.. ....|.+++++. +.||++++.++. |.+.+ .+|+.+.
T Consensus 255 ~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~~~-----V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 255 LLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEA-----IFSANRLTGSDVN 325 (400)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCC---CEEEEECSSTTSSEEEEEEET-TEEEEEESSSCS-----EEEEESSSCCCCE
T ss_pred eCCCEEEEEECCCCEEEEEeCCCCc---cEEEEeCCCCCCCCEEEEEeC-CEEEEecCCCCe-----EEEEEcCCCCceE
Confidence 9988999999999999999998642 233322 125789999964 679999987776 44443 5665544
Q ss_pred ec
Q 046018 237 KL 238 (310)
Q Consensus 237 ~~ 238 (310)
.+
T Consensus 326 ~i 327 (400)
T 3p5b_L 326 LL 327 (400)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 32
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=2.2e-16 Score=153.33 Aligned_cols=266 Identities=14% Similarity=0.111 Sum_probs=177.5
Q ss_pred ccCcEEEEEeCCCCC--eEEEEEeccccccccCCCCCcccc----------ccceeceEEEeCCCCcEEEEECCCceEEE
Q 046018 6 VADGRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEH----------ICGRPLGIRFDKKTGDLYIADAYLGFQVV 73 (310)
Q Consensus 6 ~~~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~----------~~~~p~gl~~d~~~g~l~v~~~~~gi~~~ 73 (310)
+.+..|..+..|.++ |+++...|+.+++.....|..... ....+..|+.|+ +|+||+++...||+++
T Consensus 310 l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lWigt~~~Gl~~~ 388 (781)
T 3v9f_A 310 LSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-QGKLWIGTDGGGINVF 388 (781)
T ss_dssp BSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-TSCEEEEEBSSCEEEE
T ss_pred CCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-CCCEEEEeCCCcEEEE
Confidence 455678888888877 998889999999887755544421 123466888888 8999999988899999
Q ss_pred eCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecC---
Q 046018 74 GPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQG--- 150 (310)
Q Consensus 74 d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--- 150 (310)
++.++.++.+.. ........+.+|+.|++|+ ||+++. .+.|+++++++++++.....
T Consensus 389 ~~~~~~~~~~~~-~~~~~~~~v~~i~~d~~g~-lWigt~------------------~~Gl~~~~~~~~~~~~~~~~~~~ 448 (781)
T 3v9f_A 389 ENGKRVAIYNKE-NRELLSNSVLCSLKDSEGN-LWFGTY------------------LGNISYYNTRLKKFQIIELEKNE 448 (781)
T ss_dssp ETTEEEEECC------CCCSBEEEEEECTTSC-EEEEET------------------TEEEEEECSSSCEEEECCSTTTC
T ss_pred ECCCCeEEEccC-CCCCCCcceEEEEECCCCC-EEEEec------------------cCCEEEEcCCCCcEEEeccCCCC
Confidence 998766554421 1122334577899999999 999972 46799999988888765431
Q ss_pred CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC------CCCCCeeEECCCCCEEEEEecCCccceee
Q 046018 151 LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL------PGFPDNVRSNSNGEFWVALHAKKGLFGKL 224 (310)
Q Consensus 151 ~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~p~~i~~d~~G~l~va~~~~~~~~~~~ 224 (310)
......|+.+++++ ||++.. +.|++|++.++.. ..+... ......++.|++|+||+++...+
T Consensus 449 ~~~v~~i~~d~~g~-lwigt~--~Gl~~~~~~~~~~---~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G------ 516 (781)
T 3v9f_A 449 LLDVRVFYEDKNKK-IWIGTH--AGVFVIDLASKKV---IHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG------ 516 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEET--TEEEEEESSSSSC---CEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC------
T ss_pred CCeEEEEEECCCCC-EEEEEC--CceEEEeCCCCeE---EecccCcccccccceeEEEEEcCCCCEEEEEcCCC------
Confidence 12345677777775 888743 7899999875432 222211 13346789999999999998655
Q ss_pred eeeccccccEEeeccchhh----hhcc--------cccCCCCceEEEEECCCCCEEEEEEcCCCCeecceeEEEE-eCCE
Q 046018 225 ILLNSWLGKTLLKLPLSFR----QLHS--------LLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFISEVEE-KDGQ 291 (310)
Q Consensus 225 i~~~~~~g~~~~~~~~~~~----~~~~--------~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~ 291 (310)
+.++++....+..+..+.. .+.+ +|++.. .+++.+++++...+..+...+|.+...+.+++. .+|+
T Consensus 517 l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~ 595 (781)
T 3v9f_A 517 VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGN 595 (781)
T ss_dssp EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSC
T ss_pred EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCC
Confidence 6666655444433322111 1112 233322 334377888766667776666766556666665 4789
Q ss_pred EEEecCCCCeEEEecc
Q 046018 292 LWMGSVLMPFIGIYNR 307 (310)
Q Consensus 292 l~vgs~~~~~i~~~~~ 307 (310)
||+++ ..+|.+++.
T Consensus 596 lW~~t--~~Gl~~~~~ 609 (781)
T 3v9f_A 596 IWAST--NTGISCYIT 609 (781)
T ss_dssp EEEEC--SSCEEEEET
T ss_pred EEEEc--CCceEEEEC
Confidence 99998 567888875
No 33
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=2.9e-15 Score=127.76 Aligned_cols=224 Identities=15% Similarity=0.178 Sum_probs=151.6
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..|.+|++++ +|+||+++.. ++|.++|++ +++..+... .....|.+|+++++|+ +|+++..
T Consensus 15 ~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~---~~~~~~~~i~~~~~g~-l~v~~~~------------ 76 (299)
T 2z2n_A 15 TGPYGITVSD-KGKVWITQHKANMISCINLD-GKITEYPLP---TPDAKVMCLTISSDGE-VWFTENA------------ 76 (299)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEEEEECS---STTCCEEEEEECTTSC-EEEEETT------------
T ss_pred CCccceEECC-CCCEEEEecCCCcEEEEcCC-CCeEEecCC---cccCceeeEEECCCCC-EEEeCCC------------
Confidence 5789999999 8999999985 569999998 666544321 1234789999999999 9999843
Q ss_pred hcCCCCceEEEEeCCCCeEEEEe--cCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee--CCCCCCe
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILL--QGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE--LPGFPDN 201 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~--~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~ 201 (310)
.+.|++++++ ++.+.+. .....|.+|+++++++ ||+++...+.|+++++++. ...+.. ....|.+
T Consensus 77 -----~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~g~----~~~~~~~~~~~~~~~ 145 (299)
T 2z2n_A 77 -----ANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITDDGK----IREYELPNKGSYPSF 145 (299)
T ss_dssp -----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEE
T ss_pred -----CCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECCCCC----EEEecCCCCCCCCce
Confidence 5679999987 5555443 2345689999999887 9999888889999987432 222211 2246889
Q ss_pred eEECCCCCEEEEEecCCccceeeeeeccccccEEee-ccchhhhhcccccCCC--------CceEEEEECCCCCEEEEEE
Q 046018 202 VRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLK-LPLSFRQLHSLLVGGK--------PHATAIKLSEKGEVLEVLE 272 (310)
Q Consensus 202 i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~d~~g~~~~~~~ 272 (310)
+++|++|++|+++...+. +..++++++.... .+.....+..+++... ....+.++++++++.. +.
T Consensus 146 i~~~~~g~l~v~~~~~~~-----i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~-~~ 219 (299)
T 2z2n_A 146 ITLGSDNALWFTENQNNA-----IGRITESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSGEITE-FK 219 (299)
T ss_dssp EEECTTSCEEEEETTTTE-----EEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEE-EE
T ss_pred EEEcCCCCEEEEeCCCCE-----EEEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCCcEEE-EE
Confidence 999999999999876554 5555556655432 2222222333333322 2234556677555433 32
Q ss_pred cCCCCeecceeEEEEe-CCEEEEecCCCCeEEEecc
Q 046018 273 DCEGKTLSFISEVEEK-DGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 273 ~~~g~~~~~~~~~~~~-~g~l~vgs~~~~~i~~~~~ 307 (310)
.+.. ...+..++.. +|+||+++..+++|.+++.
T Consensus 220 ~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 220 IPTP--NARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp CSST--TCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCCC--CCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 2211 2345666554 6899999988899999875
No 34
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.73 E-value=4.3e-15 Score=126.74 Aligned_cols=225 Identities=15% Similarity=0.164 Sum_probs=153.1
Q ss_pred cceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
...|.+|++++ +|+||+++.. .+|.++|++ +++..+... .....|.+|+++++|+ +|+++..
T Consensus 19 ~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~---~~~~~~~~i~~~~~g~-l~v~~~~----------- 81 (300)
T 2qc5_A 19 DSGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIKEFEVP---TPDAKVMCLIVSSLGD-IWFTENG----------- 81 (300)
T ss_dssp TCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECS---STTCCEEEEEECTTSC-EEEEETT-----------
T ss_pred CCCcceeeECC-CCCEEEEcCCCCeEEEECCC-CceEEEECC---CCCCcceeEEECCCCC-EEEEecC-----------
Confidence 36899999999 8999999975 569999998 666543221 1235789999999999 9999843
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEec--CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeee-e-CCCCCC
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILLQ--GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFA-E-LPGFPD 200 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~~--~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~-~-~~~~p~ 200 (310)
.+.|+++|++ ++.+.+.. ....|.+++++++++ +|+++..++.|+++++++. ...+. . ....|.
T Consensus 82 ------~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~ 149 (300)
T 2qc5_A 82 ------ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTADGT----IYEYDLPNKGSYPA 149 (300)
T ss_dssp ------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTTSC----EEEEECSSTTCCEE
T ss_pred ------CCeEEEECCC-CCeEEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCCCC----EEEccCCCCCCCce
Confidence 5789999998 66654432 345689999999887 9999887889999987632 22221 1 224688
Q ss_pred eeEECCCCCEEEEEecCCccceeeeeeccccccEEee-ccchhhhhcccccCCC--------CceEEEEECCCCCEEEEE
Q 046018 201 NVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLK-LPLSFRQLHSLLVGGK--------PHATAIKLSEKGEVLEVL 271 (310)
Q Consensus 201 ~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~d~~g~~~~~~ 271 (310)
++++|++|+||+++...+. +..++..++.... .+.....+..+.+... ....+.+++++++....
T Consensus 150 ~i~~d~~g~l~v~~~~~~~-----i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~- 223 (300)
T 2qc5_A 150 FITLGSDNALWFTENQNNS-----IGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEY- 223 (300)
T ss_dssp EEEECTTSSEEEEETTTTE-----EEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEE-
T ss_pred eEEECCCCCEEEEecCCCe-----EEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEE-
Confidence 9999999999999976554 5566556655432 1222223333333322 22345566766655443
Q ss_pred EcCCCCeecceeEEEEe-CCEEEEecCCCCeEEEecc
Q 046018 272 EDCEGKTLSFISEVEEK-DGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 272 ~~~~g~~~~~~~~~~~~-~g~l~vgs~~~~~i~~~~~ 307 (310)
..+.+ ...+..++.. +|+||+++..+++|.+++.
T Consensus 224 ~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 224 DIPTP--NARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp ECSST--TCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred ECCCC--CCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 22221 2345666544 7899999988899999985
No 35
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.73 E-value=4.9e-16 Score=136.38 Aligned_cols=170 Identities=15% Similarity=0.198 Sum_probs=119.3
Q ss_pred cceeceEEEeCCCCcEEEEECC------CceEEEeCCCCeEEEEEeec--CCccccCCcceEEeCCCCEEEEEeCCCchh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAY------LGFQVVGPEGGLATQLVTEA--AGQPLRFTNDLDIDEHKGVIYFTDSSTSFQ 117 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~------~gi~~~d~~~~~~~~~~~~~--~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~ 117 (310)
...|+++++|+ +|+||+++.. ..|.++|++++++....... .......+++|++++++.++|+++....
T Consensus 66 ~~~p~gv~~d~-~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~-- 142 (343)
T 2qe8_A 66 FDTVLGIKSDG-NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD-- 142 (343)
T ss_dssp CSCEEEEEECS-SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--
T ss_pred eeEeeEEEEcC-CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--
Confidence 46899999999 8999999975 46999999988754433321 1223357899999986545999986210
Q ss_pred hhhhhhhhhcCCCCceEEEEeCCCCeEEEEecC------------------------------CcccceEEEecCCCeEE
Q 046018 118 RRQFMSSILSGDKTGRLLKYEKTTKEVTILLQG------------------------------LAFANGVALSRDRTFIL 167 (310)
Q Consensus 118 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~------------------------------~~~~~gi~~~~d~~~ly 167 (310)
..+.|++||+++++...+... ...++||+++||+++||
T Consensus 143 ------------~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly 210 (343)
T 2qe8_A 143 ------------DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLY 210 (343)
T ss_dssp ------------GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEE
T ss_pred ------------CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEE
Confidence 156788888877665543311 02479999999999999
Q ss_pred EEecCCceEEEEEccC---CCCCccee---ee--eCCCCCCeeEECCCCCEEEEEecCCccceeeeeeccc-cccEE
Q 046018 168 IAETSNCRILRFWLHG---PNSGKQDV---FA--ELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSW-LGKTL 235 (310)
Q Consensus 168 v~~~~~~~i~~~~~~~---~~~~~~~~---~~--~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~-~g~~~ 235 (310)
++++...+|++++.+. ...+..+. +. ...+.|+++++|++|+||++....+. |.++++ +|+..
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~-----V~~~d~~~G~~~ 282 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSA-----IGVITSADRAYK 282 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTE-----EEEEETTTTEEE
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCe-----EEEEECCCCCEE
Confidence 9998888999998641 11111111 11 12347999999999999999988776 566665 66543
No 36
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=4.8e-16 Score=141.11 Aligned_cols=245 Identities=9% Similarity=0.103 Sum_probs=161.4
Q ss_pred cceeceEEEeC-CCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEE-------eCCCCEEEEEeCCCch
Q 046018 46 CGRPLGIRFDK-KTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDI-------DEHKGVIYFTDSSTSF 116 (310)
Q Consensus 46 ~~~p~gl~~d~-~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~-------d~~g~~l~v~~~~~~~ 116 (310)
...|.+|++|| ++++||+++.. ++|.++|++++.++.+..... .....|++|++ +++|++||+++....-
T Consensus 138 ~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~-~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 138 FSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT-IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp CCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT-SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred cCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc-cccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 36799999997 36899999986 569999999998887765422 24557999999 9999889999965200
Q ss_pred hhhhhhhhhhcCCCCceEEEEeCCC-CeE------EEEecCCcccceEEEecCCCeEEEEecCCceEEEEEcc-------
Q 046018 117 QRRQFMSSILSGDKTGRLLKYEKTT-KEV------TILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLH------- 182 (310)
Q Consensus 117 ~~~~~~~~~~~~~~~g~v~~~d~~~-~~~------~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~------- 182 (310)
. .....|+.++.+. +.+ ..+. ....|++++++|++++||+++..+++|++|+++
T Consensus 217 ~-----------~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~ 284 (496)
T 3kya_A 217 G-----------DESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIK 284 (496)
T ss_dssp G-----------GGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHH
T ss_pred c-----------ccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEeccccccccc
Confidence 0 0123478886544 233 2333 466899999999877899999999999999997
Q ss_pred CCCCCc---------ceeeeeC--CCCCCeeEECCCCC-EEEEEecCCccceeeeeeccccc---cE-----Eeec-cc-
Q 046018 183 GPNSGK---------QDVFAEL--PGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLNSWLG---KT-----LLKL-PL- 240 (310)
Q Consensus 183 ~~~~~~---------~~~~~~~--~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~~~g---~~-----~~~~-~~- 240 (310)
++.... ...+... ...|.+|+++++|+ |||++..+++ |.+++.++ .+ +.-. ..
T Consensus 285 tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~-----I~kid~dg~~~~~~~~~~~aG~~g~~ 359 (496)
T 3kya_A 285 NGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHY-----FMRSDYDEIKKEFITPYNFVGGYKQS 359 (496)
T ss_dssp TTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE-----EEEEEEETTTTEECCCEEEEEBTTBC
T ss_pred CceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCE-----EEEEecCCCcceecccEEecCCCCCC
Confidence 443300 1122222 24688999999998 8999988776 44433222 11 1110 00
Q ss_pred ----------hhhhhc-ccccC---------------CCCceEEEEECCCCCEEEEEEcC--------------CC----
Q 046018 241 ----------SFRQLH-SLLVG---------------GKPHATAIKLSEKGEVLEVLEDC--------------EG---- 276 (310)
Q Consensus 241 ----------~~~~~~-~~~~~---------------~~~~~~~~~~d~~g~~~~~~~~~--------------~g---- 276 (310)
....|. .++.. ......+-+++++|.+....... +|
T Consensus 360 G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~ 439 (496)
T 3kya_A 360 GYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLRE 439 (496)
T ss_dssp CCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTT
T ss_pred cccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchh
Confidence 011222 22221 11223555788888766554321 22
Q ss_pred -CeecceeEEEEeC--CEEEEecCCCCeEEEeccc
Q 046018 277 -KTLSFISEVEEKD--GQLWMGSVLMPFIGIYNRF 308 (310)
Q Consensus 277 -~~~~~~~~~~~~~--g~l~vgs~~~~~i~~~~~~ 308 (310)
..+..++.++... |.|||+...+.+|.++++-
T Consensus 440 ~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 440 VARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp TCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred hhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 1466778887663 8999999999999998763
No 37
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=1.2e-16 Score=155.21 Aligned_cols=263 Identities=12% Similarity=0.099 Sum_probs=175.5
Q ss_pred ccCcEEEEEeCCCCC--eEEEEEeccccccccCCCCCccc----cccceeceEEEeCCCCcEEEEECCCceEEEeCCCCe
Q 046018 6 VADGRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIE----HICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGL 79 (310)
Q Consensus 6 ~~~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~ 79 (310)
+....|..+..+.++ |+++...||.+++..+..+.... .....+..|+.|+ +|+||+++...||+++++++++
T Consensus 360 l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lWigt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 360 LSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGNLWFGTYLGNISYYNTRLKK 438 (781)
T ss_dssp CSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSCEEEEETTEEEEEECSSSCE
T ss_pred CCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCCEEEEeccCCEEEEcCCCCc
Confidence 345678888888766 99887899999987664333221 1124566888888 8999999887899999999888
Q ss_pred EEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCC------cc
Q 046018 80 ATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGL------AF 153 (310)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~------~~ 153 (310)
++.+... ......+.+|+.|++|+ ||+++ .+.|+++|+++++++...... ..
T Consensus 439 ~~~~~~~--~~~~~~v~~i~~d~~g~-lwigt-------------------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (781)
T 3v9f_A 439 FQIIELE--KNELLDVRVFYEDKNKK-IWIGT-------------------HAGVFVIDLASKKVIHHYDTSNSQLLENF 496 (781)
T ss_dssp EEECCST--TTCCCCEEEEEECTTSE-EEEEE-------------------TTEEEEEESSSSSCCEEECTTTSSCSCSC
T ss_pred EEEeccC--CCCCCeEEEEEECCCCC-EEEEE-------------------CCceEEEeCCCCeEEecccCcccccccce
Confidence 7655321 22334677899999998 99998 356999999887766544221 23
Q ss_pred cceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCC----CCCeeEECCCCCEEEEEecCCccceeee-eec
Q 046018 154 ANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPG----FPDNVRSNSNGEFWVALHAKKGLFGKLI-LLN 228 (310)
Q Consensus 154 ~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~p~~i~~d~~G~l~va~~~~~~~~~~~i-~~~ 228 (310)
...|+.+++|+ ||++ +..+.|++++++++ ....+....+ ....++.|++|+||+++. .+ + .++
T Consensus 497 i~~i~~d~~g~-lWig-t~~~Gl~~~~~~~~---~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~G------lv~~~ 564 (781)
T 3v9f_A 497 VRSIAQDSEGR-FWIG-TFGGGVGIYTPDMQ---LVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EG------LVCFP 564 (781)
T ss_dssp EEEEEECTTCC-EEEE-ESSSCEEEECTTCC---EEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TE------EEEES
T ss_pred eEEEEEcCCCC-EEEE-EcCCCEEEEeCCCC---eEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CC------ceEEE
Confidence 56788888887 8887 44467999987643 2222322112 235688999999999997 34 4 666
Q ss_pred cccccEEeeccchhhh----hc--------ccccCCCCceEEEEECCCCCEEEEEEcCCCCeeccee--EEE-EeCCEEE
Q 046018 229 SWLGKTLLKLPLSFRQ----LH--------SLLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFIS--EVE-EKDGQLW 293 (310)
Q Consensus 229 ~~~g~~~~~~~~~~~~----~~--------~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~--~~~-~~~g~l~ 293 (310)
++....+..+...... .. .+|++.. ..+.+++++.+.+..+...+|.+...+. +++ ..+|+||
T Consensus 565 d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~--~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~ 642 (781)
T 3v9f_A 565 SARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN--TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIY 642 (781)
T ss_dssp CTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS--SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEE
T ss_pred CCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC--CceEEEECCCCceEEecccCCccccccccCceEECCCCEEE
Confidence 5544333333221111 11 2333332 2467889888888888777776555442 333 3589999
Q ss_pred EecCCCCeEEEecc
Q 046018 294 MGSVLMPFIGIYNR 307 (310)
Q Consensus 294 vgs~~~~~i~~~~~ 307 (310)
+|+ .+++.+|+.
T Consensus 643 ~g~--~~Gl~~f~p 654 (781)
T 3v9f_A 643 FGS--INGLCFFNP 654 (781)
T ss_dssp EEE--TTEEEEECS
T ss_pred EEC--CCceEEECh
Confidence 999 467888875
No 38
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.72 E-value=3.1e-16 Score=147.95 Aligned_cols=191 Identities=19% Similarity=0.233 Sum_probs=143.8
Q ss_pred cccCcEEEEEeCCCCC--eEEEEEeccccccccCCCCCcccc-ccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeE
Q 046018 5 GVADGRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEH-ICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLA 80 (310)
Q Consensus 5 ~~~~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~ 80 (310)
++.......++...+. |.+.....+.+++..+...+.+.. ....|.|||+|+..++||+++... .|.++++++...
T Consensus 35 ~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 35 GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR 114 (628)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC
T ss_pred CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE
Confidence 3344445667765555 888877778887776633222222 236799999997678999999874 599999987765
Q ss_pred EEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEe
Q 046018 81 TQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALS 160 (310)
Q Consensus 81 ~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~ 160 (310)
+.+.. ..+..|++|++||....||+++.+ ..++|.++++++...+.+...+..|+||+++
T Consensus 115 ~~l~~----~~l~~P~~iavdp~~G~lY~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD 174 (628)
T 4a0p_A 115 QVLVW----KDLDSPRALALDPAEGFMYWTEWG----------------GKPKIDRAAMDGSERTTLVPNVGRANGLTID 174 (628)
T ss_dssp EEEEC----SSCCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSCSSEEEEEEE
T ss_pred EEEEe----CCCCCcccEEEccCCCeEEEeCCC----------------CCCEEEEEeCCCCceEEEECCCCCcceEEEc
Confidence 44432 234579999999854449999953 2568999999877677777788899999999
Q ss_pred cCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCCc
Q 046018 161 RDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 161 ~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
+++++|||++...++|+++++++... +.+......|.+++++. ++||++++..+.
T Consensus 175 ~~~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~l~~P~glav~~-~~ly~tD~~~~~ 229 (628)
T 4a0p_A 175 YAKRRLYWTDLDTNLIESSNMLGLNR---EVIADDLPHPFGLTQYQ-DYIYWTDWSRRS 229 (628)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSC---EEEEECCSCEEEEEEET-TEEEEEETTTTE
T ss_pred cccCEEEEEECCCCEEEEEcCCCCce---EEeeccCCCceEEEEEC-CEEEEecCCCCE
Confidence 99888999999999999999987432 34444345799999987 789999987765
No 39
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.72 E-value=2.7e-15 Score=141.40 Aligned_cols=187 Identities=16% Similarity=0.203 Sum_probs=132.0
Q ss_pred cEEEEEeCCCCC--eEEEEEeccccccccCCCC-Cc-cccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEE
Q 046018 9 GRILKWQGDELG--WTEFAVTTSQRKECVRPFA-PD-IEHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQL 83 (310)
Q Consensus 9 ~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~-~~-~~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~ 83 (310)
.....++...+. |.+.....+.+++..+... +. +......|.|||+|+..++||+++... .|.++++++...+.+
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l 121 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL 121 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEE
Confidence 344556665555 8887777777776655321 11 222336899999998778999999875 499999998765545
Q ss_pred EeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecC
Q 046018 84 VTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRD 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d 162 (310)
.. ..+..|++|++||.+.+||+++.+ ..++|.+.++++...+.+. ..+..|+||+++++
T Consensus 122 ~~----~~l~~P~~Iavdp~~g~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~ 181 (619)
T 3s94_A 122 FW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYE 181 (619)
T ss_dssp EC----SSCSCCCCEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSSEEEEEEETT
T ss_pred Ee----CCCCCCceEEEecCCCeEEEeccC----------------CCCEEEEEECCCCceEEEEeCCCCCCcEEEEEcc
Confidence 42 245689999999975559999954 2568999998865454443 56778999999998
Q ss_pred CCeEEEEecCCceEEEEEccCCCCCcceeeee-CCCCCCeeEECCCCCEEEEEecCCc
Q 046018 163 RTFILIAETSNCRILRFWLHGPNSGKQDVFAE-LPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 163 ~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
+++|||++...++|++++.+|... ..+.. ....|.+|+++++ +||++++..+.
T Consensus 182 ~~~LY~aD~~~~~I~~~~~dG~~~---~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~ 235 (619)
T 3s94_A 182 EQKLYWADAKLNFIHKSNLDGTNR---QAVVKGSLPHPFALTLFED-ILYWTDWSTHS 235 (619)
T ss_dssp TTEEEEEETTTCCEEEESSSCCEE---C---------CCCEEESSS-EEEEECTTTCS
T ss_pred CCEEEEEeCCCCeEEEecCCCCcc---EEEEeCCCCCceEEEEeCC-EEEEecCCCCE
Confidence 888999999999999999987421 22222 2357899999876 89999988776
No 40
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.71 E-value=4.6e-15 Score=144.30 Aligned_cols=265 Identities=15% Similarity=0.174 Sum_probs=176.4
Q ss_pred ccCcEEEEEeCCCCC--eEEEEEeccccccccCCCCCcccc-------ccceeceEEEeCCCCcEEEEECCCceEEEeCC
Q 046018 6 VADGRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEH-------ICGRPLGIRFDKKTGDLYIADAYLGFQVVGPE 76 (310)
Q Consensus 6 ~~~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~-------~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~ 76 (310)
+.+..|..+..|.++ |+++...|+.++++....|..... .......|+.|+ +|+||+++..+||.++++.
T Consensus 307 l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~-~g~lWiGt~~~Gl~~~~~~ 385 (795)
T 4a2l_A 307 LSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK-DKNLWIGTNDGGLNLYNPI 385 (795)
T ss_dssp CSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT-TSCEEEEESSSCEEEECTT
T ss_pred CCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC-CCCEEEEECCCCeEEEcCC
Confidence 445678888888877 998888999999887655543322 123466888998 9999999998899999999
Q ss_pred CCeEEEEEeec---C-CccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecC--
Q 046018 77 GGLATQLVTEA---A-GQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQG-- 150 (310)
Q Consensus 77 ~~~~~~~~~~~---~-~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-- 150 (310)
+++++.+.... . ......+.+++.|++|+.||+++. .+.|+++|+++++++.+...
T Consensus 386 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~------------------~~Gl~~~d~~~~~~~~~~~~~~ 447 (795)
T 4a2l_A 386 TQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH------------------AGGLSILHRNSGQVENFNQRNS 447 (795)
T ss_dssp TCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET------------------TTEEEEEETTTCCEEEECTTTS
T ss_pred CCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC------------------cCceeEEeCCCCcEEEeecCCC
Confidence 88876653221 0 122345678889999875899872 45699999998888765431
Q ss_pred ---CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee------CC-CCCCeeEECCCCCEEEEEecCCcc
Q 046018 151 ---LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE------LP-GFPDNVRSNSNGEFWVALHAKKGL 220 (310)
Q Consensus 151 ---~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~------~~-~~p~~i~~d~~G~l~va~~~~~~~ 220 (310)
......|+.+++++ ||++.. ++|++|+++++. ...+.. ++ .....++.|++|+||+++. ++
T Consensus 448 ~l~~~~v~~i~~d~~g~-lwigt~--~Gl~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G-- 518 (795)
T 4a2l_A 448 QLVNENVYAILPDGEGN-LWLGTL--SALVRFNPEQRS---FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG-- 518 (795)
T ss_dssp CCSCSCEEEEEECSSSC-EEEEES--SCEEEEETTTTE---EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC--
T ss_pred CcCCCeeEEEEECCCCC-EEEEec--CceeEEeCCCCe---EEEccccccccccCCceEEEEEECCCCCEEEEeC-Cc--
Confidence 12245677777776 888753 689999986432 222211 11 2345688999999999997 44
Q ss_pred ceeeeeeccccccEEeecc-------chhhhhcc--------cccCCCCceEEEEECCCCCEEEEEEcCCCCeecceeEE
Q 046018 221 FGKLILLNSWLGKTLLKLP-------LSFRQLHS--------LLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFISEV 285 (310)
Q Consensus 221 ~~~~i~~~~~~g~~~~~~~-------~~~~~~~~--------~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~ 285 (310)
+.++++....+ .+. .+...+.+ +|++... .+.+++++...++.+...+|.+...+..+
T Consensus 519 ----l~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~--Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i 591 (795)
T 4a2l_A 519 ----LSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE--GFYCFNEKDKQIKRYNTTNGLPNNVVYGI 591 (795)
T ss_dssp ----EEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS--CEEEEETTTTEEEEECGGGTCSCSCEEEE
T ss_pred ----eEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC--CceeECCCCCcEEEeCCCCCCchhheEEE
Confidence 55554433322 211 11111122 2333222 46678887777777766667665667777
Q ss_pred EEe-CCEEEEecCCCCeEEEecc
Q 046018 286 EEK-DGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 286 ~~~-~g~l~vgs~~~~~i~~~~~ 307 (310)
+.. +|+||+++ ..+|.+++.
T Consensus 592 ~~d~~g~lWi~t--~~Gl~~~~~ 612 (795)
T 4a2l_A 592 LEDSFGRLWLST--NRGISCFNP 612 (795)
T ss_dssp EECTTSCEEEEE--TTEEEEEET
T ss_pred EECCCCCEEEEc--CCceEEEcC
Confidence 654 78999999 578988875
No 41
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.71 E-value=3.5e-15 Score=140.78 Aligned_cols=196 Identities=16% Similarity=0.171 Sum_probs=140.8
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..|.+|++|+.+++||+++... .|+++++++...+.+... ....|.+||+|+.++.||+++..
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~----g~~~P~GlAvD~~~~~LY~tD~~------------ 100 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF----GLDYPEGMAVDWLGKNLYWADTG------------ 100 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----SCSCCCEEEEETTTTEEEEEETT------------
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC----CCCCcceEEEEeCCCEEEEEECC------------
Confidence 5789999998789999999875 599999988765555432 23579999999875569999964
Q ss_pred hcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecC-CceEEEEEccCCCCCcceeeeeCCCCCCeeE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETS-NCRILRFWLHGPNSGKQDVFAELPGFPDNVR 203 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~ 203 (310)
.++|.++++++...+.+. ..+..|++|+++|..+.|||++.+ ..+|++++++|.. ...+...-..|.+++
T Consensus 101 -----~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~---~~~l~~~~~~P~Gla 172 (628)
T 4a0p_A 101 -----TNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE---RTTLVPNVGRANGLT 172 (628)
T ss_dssp -----TTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---CEEEECSCSSEEEEE
T ss_pred -----CCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc---eEEEECCCCCcceEE
Confidence 678999999866555544 667889999999977789999976 6899999998753 233333335799999
Q ss_pred ECCC-CCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCCCceEEEEECCCCCEEEEEEcCCCCeecce
Q 046018 204 SNSN-GEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFI 282 (310)
Q Consensus 204 ~d~~-G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~ 282 (310)
+|++ ++||+++...+. | .+++.+|...+.+.. + +..+
T Consensus 173 lD~~~~~LY~aD~~~~~-----I---------------------------------~~~d~dG~~~~v~~~--~--l~~P 210 (628)
T 4a0p_A 173 IDYAKRRLYWTDLDTNL-----I---------------------------------ESSNMLGLNREVIAD--D--LPHP 210 (628)
T ss_dssp EETTTTEEEEEETTTTE-----E---------------------------------EEEETTSCSCEEEEE--C--CSCE
T ss_pred EccccCEEEEEECCCCE-----E---------------------------------EEEcCCCCceEEeec--c--CCCc
Confidence 9985 689999976653 2 223333321122221 1 2335
Q ss_pred eEEEEeCCEEEEecCCCCeEEEeccc
Q 046018 283 SEVEEKDGQLWMGSVLMPFIGIYNRF 308 (310)
Q Consensus 283 ~~~~~~~g~l~vgs~~~~~i~~~~~~ 308 (310)
.+++..+++||+..+.+..|.+++++
T Consensus 211 ~glav~~~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 211 FGLTQYQDYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEETT
T ss_pred eEEEEECCEEEEecCCCCEEEEEECC
Confidence 56666677888888877888887764
No 42
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.71 E-value=3e-15 Score=126.15 Aligned_cols=153 Identities=20% Similarity=0.313 Sum_probs=108.0
Q ss_pred eeceEEEeCCCCcEEE-EECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 48 RPLGIRFDKKTGDLYI-ADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v-~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.|.+|++++ +|+||+ ++.. .+|.++++.+.....+. ......|.+|+++++|+ +|+++.
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~p~~i~~~~~g~-l~v~~~------------- 85 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLP----FNGLYQPQGLAVDGAGT-VYVTDF------------- 85 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----EECC----CCSCCSCCCEEECTTCC-EEEEET-------------
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccceEe----eCCcCCcceeEECCCCC-EEEEcC-------------
Confidence 899999999 889999 7655 46999998766543221 12335789999999999 999982
Q ss_pred hcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee-CCCCCCeeE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE-LPGFPDNVR 203 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~ 203 (310)
.+.|++||++++....+. .....|.+|+++++++ ||+++..+++|++++..... ...... ....|.+++
T Consensus 86 -----~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~ 156 (270)
T 1rwi_B 86 -----NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKT---QTVLPFTGLNDPDGVA 156 (270)
T ss_dssp -----TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCS---CEECCCCSCCSCCCEE
T ss_pred -----CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCce---eEeeccccCCCceeEE
Confidence 467999999876554433 3346799999999987 99998888999999643221 111111 124689999
Q ss_pred ECCCCCEEEEEecCCccceeeeeecccccc
Q 046018 204 SNSNGEFWVALHAKKGLFGKLILLNSWLGK 233 (310)
Q Consensus 204 ~d~~G~l~va~~~~~~~~~~~i~~~~~~g~ 233 (310)
+|++|+||+++...+. +..++..+.
T Consensus 157 ~~~~g~l~v~~~~~~~-----i~~~~~~~~ 181 (270)
T 1rwi_B 157 VDNSGNVYVTDTDNNR-----VVKLEAESN 181 (270)
T ss_dssp ECTTCCEEEEEGGGTE-----EEEECTTTC
T ss_pred EeCCCCEEEEECCCCE-----EEEEecCCC
Confidence 9999999999876554 455554444
No 43
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=1.2e-15 Score=133.07 Aligned_cols=222 Identities=8% Similarity=0.018 Sum_probs=147.4
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..|.+|+++ +++||++.... .|.++|+++++...... ....|.+|+++++|+ +|+++..
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~-----~~~~p~~i~~~~~g~-lyv~~~~------------ 103 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRIT-----GFTSPRYIHFLSDEK-AYVTQIW------------ 103 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEE-----CCSSEEEEEEEETTE-EEEEEBS------------
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcC-----CCCCCcEEEEeCCCe-EEEEECC------------
Confidence 457889986 47899999864 49999999887643222 134789999999996 9999842
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCc------ccceEEEecCCCeEEEEec-CCceEEEEEccCCCCCcceeeeeCCCC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLA------FANGVALSRDRTFILIAET-SNCRILRFWLHGPNSGKQDVFAELPGF 198 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~------~~~gi~~~~d~~~lyv~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~ 198 (310)
.+.|.++|+++++......... .|.+|++ +++.||+++. .++.|.++|+++.+. .........
T Consensus 104 -----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~---~~~i~~g~~ 173 (328)
T 3dsm_A 104 -----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKV---VDELTIGIQ 173 (328)
T ss_dssp -----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEE---EEEEECSSC
T ss_pred -----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeE---EEEEEcCCC
Confidence 6789999999888764443344 7999999 4556999987 488999999875321 111223456
Q ss_pred CCeeEECCCCCEEEEEecC----------Cccceeeeeec-cccccEEeeccchh-hhhcccccCCCCceEEEEECCCCC
Q 046018 199 PDNVRSNSNGEFWVALHAK----------KGLFGKLILLN-SWLGKTLLKLPLSF-RQLHSLLVGGKPHATAIKLSEKGE 266 (310)
Q Consensus 199 p~~i~~d~~G~l~va~~~~----------~~~~~~~i~~~-~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~g~ 266 (310)
|.++++|++|++|+++... +. +..+ ..+++....+..+. ..|..+++......+++ .+. .
T Consensus 174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~-----v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv-~~~--~ 245 (328)
T 3dsm_A 174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPS-----LYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW-INN--D 245 (328)
T ss_dssp BCCCEECTTSEEEEEBCCBCTTCSSCBCCCE-----EEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE-ESS--S
T ss_pred ccceEEcCCCCEEEEECCCccCCccccCCce-----EEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE-Ecc--E
Confidence 8999999999999998764 33 4444 44566666665542 24555555543333332 111 1
Q ss_pred EEEEEEcCCCC----e-----ecceeEEEEe--CCEEEEec----CCCCeEEEecc
Q 046018 267 VLEVLEDCEGK----T-----LSFISEVEEK--DGQLWMGS----VLMPFIGIYNR 307 (310)
Q Consensus 267 ~~~~~~~~~g~----~-----~~~~~~~~~~--~g~l~vgs----~~~~~i~~~~~ 307 (310)
+..+....+. . ...+..++.. +++||+++ ..++.|.+|+.
T Consensus 246 -v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 246 -IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp -EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred -EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 1122211111 0 1345666553 78999998 77889999985
No 44
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.70 E-value=4.9e-15 Score=126.16 Aligned_cols=167 Identities=20% Similarity=0.291 Sum_probs=118.8
Q ss_pred cceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeec-CCccccCCcceEE-eCCCCEEEEEeCCCchhhhhhh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEA-AGQPLRFTNDLDI-DEHKGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~-~~~~~~~~~~i~~-d~~g~~l~v~~~~~~~~~~~~~ 122 (310)
...|.++++++ +|+||+++.. ++|.++|+++..+..+.... .......|.++++ +++|+ +|+++..
T Consensus 29 ~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~--------- 97 (286)
T 1q7f_A 29 FTEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERS--------- 97 (286)
T ss_dssp BSCEEEEEECT-TCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECG---------
T ss_pred cCCCceEEECC-CCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCC---------
Confidence 46799999999 8999999876 45999999866544442211 1123357899999 47887 9999832
Q ss_pred hhhhcCCCCceEEEEeCCCCeEEEEec-CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee--CCCCC
Q 046018 123 SSILSGDKTGRLLKYEKTTKEVTILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE--LPGFP 199 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p 199 (310)
..+.|++||+++.....+.. ....|++|+++++++ +|+++..+++|++|++++.. ...+.. ....|
T Consensus 98 -------~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~---~~~~~~~~~~~~p 166 (286)
T 1q7f_A 98 -------PTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGNV---LHKFGCSKHLEFP 166 (286)
T ss_dssp -------GGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSCE---EEEEECTTTCSSE
T ss_pred -------CCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCCE---EEEeCCCCccCCc
Confidence 15679999976544443432 345689999999997 99999888999999976431 122221 12468
Q ss_pred CeeEECCCCCEEEEEecCCccceeeeeeccccccEEeecc
Q 046018 200 DNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLP 239 (310)
Q Consensus 200 ~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~ 239 (310)
.++++|++|++|+++...+. |..++..++.+..+.
T Consensus 167 ~~i~~~~~g~l~v~~~~~~~-----i~~~~~~g~~~~~~~ 201 (286)
T 1q7f_A 167 NGVVVNDKQEIFISDNRAHC-----VKVFNYEGQYLRQIG 201 (286)
T ss_dssp EEEEECSSSEEEEEEGGGTE-----EEEEETTCCEEEEES
T ss_pred EEEEECCCCCEEEEECCCCE-----EEEEcCCCCEEEEEc
Confidence 99999999999999876654 566666777665553
No 45
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.70 E-value=1.8e-15 Score=131.92 Aligned_cols=196 Identities=12% Similarity=-0.034 Sum_probs=127.7
Q ss_pred eEEE-EEeccccccccCCCCCccccccc------eeceEEEeCCCCcEEEEECC--CceEEEeCCCCeEEEEEeecCCcc
Q 046018 21 WTEF-AVTTSQRKECVRPFAPDIEHICG------RPLGIRFDKKTGDLYIADAY--LGFQVVGPEGGLATQLVTEAAGQP 91 (310)
Q Consensus 21 W~~~-~~~~~~~~~~~~~~~~~~~~~~~------~p~gl~~d~~~g~l~v~~~~--~gi~~~d~~~~~~~~~~~~~~~~~ 91 (310)
|+.. ....+..+|..+.+......... .|.+|++ . +++||+++.. +.|.++|++++++......
T Consensus 98 yv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~----- 170 (328)
T 3dsm_A 98 YVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTI----- 170 (328)
T ss_dssp EEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEEC-----
T ss_pred EEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-----
Confidence 5544 34556666765532222222233 7999999 4 7899999863 4599999998876543332
Q ss_pred ccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEec--CCcccceEEEecCCCeEEEE
Q 046018 92 LRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQ--GLAFANGVALSRDRTFILIA 169 (310)
Q Consensus 92 ~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--~~~~~~gi~~~~d~~~lyv~ 169 (310)
...|++++++++|+ +|++........ .+ ....+.|+++|+++++...... ....|++++++||+++||++
T Consensus 171 g~~p~~i~~~~dG~-l~v~~~~~~~~~------~~-~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 171 GIQPTSLVMDKYNK-MWTITDGGYEGS------PY-GYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp SSCBCCCEECTTSE-EEEEBCCBCTTC------SS-CBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE
T ss_pred CCCccceEEcCCCC-EEEEECCCccCC------cc-ccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE
Confidence 23689999999999 999985421000 00 0013689999999887764322 23479999999999999998
Q ss_pred ecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECC-CCCEEEEE----ecCCccceeeeeeccccccEEeecc
Q 046018 170 ETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNS-NGEFWVAL----HAKKGLFGKLILLNSWLGKTLLKLP 239 (310)
Q Consensus 170 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~va~----~~~~~~~~~~i~~~~~~g~~~~~~~ 239 (310)
+. .|+++|+++++.............|++|++|+ +|+|||++ ...+. |.++++.|+.+..++
T Consensus 243 ~~---~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~-----V~v~d~~g~~~~~i~ 309 (328)
T 3dsm_A 243 NN---DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGI-----VYRYSPQGKLIDEFY 309 (328)
T ss_dssp SS---SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEE-----EEEECTTCCEEEEEE
T ss_pred cc---EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCE-----EEEECCCCCEEEEEE
Confidence 65 89999987653321111111135799999998 78999998 44333 455555566555554
No 46
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.68 E-value=1.3e-16 Score=152.41 Aligned_cols=208 Identities=14% Similarity=0.173 Sum_probs=141.4
Q ss_pred EEEeCCCCC--eEEEEEeccccccccC----CCCCcc-ccccceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEE
Q 046018 12 LKWQGDELG--WTEFAVTTSQRKECVR----PFAPDI-EHICGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQL 83 (310)
Q Consensus 12 ~~~~~~~~~--W~~~~~~~~~~~~~~~----~~~~~~-~~~~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~ 83 (310)
..|+...+. |++.....|.+++..+ .....+ ......|.||++++..++||+++.. +.|.++++++...+.+
T Consensus 411 la~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l 490 (699)
T 1n7d_A 411 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL 490 (699)
T ss_dssp CEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEE
T ss_pred EccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEE
Confidence 345554444 6666666677766553 111222 2234679999999658899999877 4599999997765544
Q ss_pred EeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecC
Q 046018 84 VTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRD 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d 162 (310)
+. ..+..|++|+++|++++||+++.. ..+.|+++++++...+++. ..+..|+||+++++
T Consensus 491 ~~----~~~~~P~giavDp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~ 550 (699)
T 1n7d_A 491 FR----EQGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLL 550 (699)
T ss_dssp CC----CSSCCCCCEECCSSSSCCEECCCS----------------SSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTT
T ss_pred Ee----CCCCCcceEEEccCCCcEEEcccC----------------CCCeEEEEeCCCCCeeEEEeCCCCCccEEEEecc
Confidence 32 234579999999964449999853 1367999988754444333 45778999999999
Q ss_pred CCeEEEEecCCceEEEEEccCCCCCcceeeee---CCCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeec
Q 046018 163 RTFILIAETSNCRILRFWLHGPNSGKQDVFAE---LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKL 238 (310)
Q Consensus 163 ~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~ 238 (310)
+++|||+++.+++|+++++++.. ...+.. ....|.+|+++.+ +||++++..+. |.+++ .+|+.+..+
T Consensus 551 ~~~LY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~-----V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 551 SGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA-----IFSANRLTGSDVNLL 621 (699)
T ss_dssp TCCEEEEETTTTEEEEECSSSSC---CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTC-----EEEEETTTEEEEECC
T ss_pred CCEEEEEecCCCeEEEEccCCCc---eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCe-----EEEEEccCCCceEEe
Confidence 88899999999999999998632 233322 1257899999875 68888887766 55554 467777777
Q ss_pred cchhhhhccc
Q 046018 239 PLSFRQLHSL 248 (310)
Q Consensus 239 ~~~~~~~~~~ 248 (310)
..+...|..+
T Consensus 622 ~~~~~~P~~i 631 (699)
T 1n7d_A 622 AENLLSPEDM 631 (699)
T ss_dssp CTTCSSCCCC
T ss_pred ecCCCCCcEE
Confidence 6554444444
No 47
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.68 E-value=6.6e-16 Score=147.63 Aligned_cols=168 Identities=11% Similarity=0.131 Sum_probs=114.8
Q ss_pred cccccccCCCCCccccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCC----CeEEEEEeecCCccccCCcceEEeCC
Q 046018 29 SQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEG----GLATQLVTEAAGQPLRFTNDLDIDEH 103 (310)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~----~~~~~~~~~~~~~~~~~~~~i~~d~~ 103 (310)
+.+++..+.....+......|.+|++++.++.||+++... .|+++++++ .....+. ...+..|.+|++++.
T Consensus 388 I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i----~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 388 VRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI----SRDIQAPDGLAVDWI 463 (699)
T ss_dssp -CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC----CSCC--CCCEECCCS
T ss_pred eEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE----eCCCCCcceEEEEee
Confidence 4444444422223333456899999998788999999874 599999886 2211111 122446899999954
Q ss_pred CCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecCC-ceEEEEEc
Q 046018 104 KGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETSN-CRILRFWL 181 (310)
Q Consensus 104 g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~~-~~i~~~~~ 181 (310)
++.||+++.. .++|.++++++...+.+. ..+..|++|+++|++++|||++... ++|+++++
T Consensus 464 ~g~LY~tD~~-----------------~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~ 526 (699)
T 1n7d_A 464 HSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 526 (699)
T ss_dssp SSBCEECCTT-----------------TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCS
T ss_pred CCcEEEEecc-----------------CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeC
Confidence 4339999854 678999999876655554 3467899999999877899998765 89999998
Q ss_pred cCCCCCcceeeeeCCCCCCeeEECCC-CCEEEEEecCCc
Q 046018 182 HGPNSGKQDVFAELPGFPDNVRSNSN-GEFWVALHAKKG 219 (310)
Q Consensus 182 ~~~~~~~~~~~~~~~~~p~~i~~d~~-G~l~va~~~~~~ 219 (310)
++... ..++......|++|++|++ ++||+++...+.
T Consensus 527 dG~~~--~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~ 563 (699)
T 1n7d_A 527 NGVDI--YSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 563 (699)
T ss_dssp SSCCC--CEESCSSCSSCCCEEECTTTCCEEEEETTTTE
T ss_pred CCCCe--eEEEeCCCCCccEEEEeccCCEEEEEecCCCe
Confidence 86422 1122222357999999975 689999976553
No 48
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.67 E-value=1.1e-14 Score=137.10 Aligned_cols=154 Identities=16% Similarity=0.126 Sum_probs=113.0
Q ss_pred ccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeE-EEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhh
Q 046018 43 EHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLA-TQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQ 120 (310)
Q Consensus 43 ~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~-~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~ 120 (310)
......|.+|++++.+++||+++... .|+++++++... +.+.. .....|++||+|+.++.||+++..
T Consensus 36 ~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~----~~~~~P~GlAvD~~~~~ly~~d~~------- 104 (619)
T 3s94_A 36 VGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV----SGLLSPDGLACDWLGEKLYWTDSE------- 104 (619)
T ss_dssp CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC----SSCSCEEEEEEETTTTEEEEEETT-------
T ss_pred EcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe----CCCCCcCeEEEEecCCEEEEEeCC-------
Confidence 33456899999998788999999874 599999987532 22222 134579999999965569999954
Q ss_pred hhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecC-CceEEEEEccCCCCCcceeeeeCCCC
Q 046018 121 FMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETS-NCRILRFWLHGPNSGKQDVFAELPGF 198 (310)
Q Consensus 121 ~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ 198 (310)
.++|.++++++...+++. ..+..|++|+++|.++.|||++.+ ..+|++.+++|... .......-..
T Consensus 105 ----------~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~--~~l~~~~~~~ 172 (619)
T 3s94_A 105 ----------TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR--FIIINSEIYW 172 (619)
T ss_dssp ----------TTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEEECSSCSS
T ss_pred ----------CCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce--EEEEeCCCCC
Confidence 678999999866555554 677889999999987789999976 57999999987422 1222223357
Q ss_pred CCeeEECC-CCCEEEEEecCCc
Q 046018 199 PDNVRSNS-NGEFWVALHAKKG 219 (310)
Q Consensus 199 p~~i~~d~-~G~l~va~~~~~~ 219 (310)
|.+|++|+ +++||+++...+.
T Consensus 173 P~Glald~~~~~LY~aD~~~~~ 194 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWADAKLNF 194 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTCC
T ss_pred CcEEEEEccCCEEEEEeCCCCe
Confidence 99999997 4789999876654
No 49
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.66 E-value=3.7e-15 Score=143.46 Aligned_cols=184 Identities=15% Similarity=0.185 Sum_probs=129.2
Q ss_pred EEEeCCCCC--eEEEEEeccccccccCC----CCCcc-ccccceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEE
Q 046018 12 LKWQGDELG--WTEFAVTTSQRKECVRP----FAPDI-EHICGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQL 83 (310)
Q Consensus 12 ~~~~~~~~~--W~~~~~~~~~~~~~~~~----~~~~~-~~~~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~ 83 (310)
+.++...+. |++.....|.+++..+. ....+ ......|.|||+|+..++||+++... .|.++++++...+.+
T Consensus 429 l~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l 508 (791)
T 3m0c_C 429 LDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL 508 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE
T ss_pred EeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEE
Confidence 344443333 77665555666555431 11122 22457899999998677999999884 599999998776555
Q ss_pred EeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecC
Q 046018 84 VTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRD 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d 162 (310)
+.. .+..|++|++|+.+.+||+++.+ ..++|.++++++...+.+. ..+..|+||++++.
T Consensus 509 ~~~----~l~~P~gIaVDp~~g~LYwtD~g----------------~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~ 568 (791)
T 3m0c_C 509 FRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLL 568 (791)
T ss_dssp EEC----TTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECSSCSCEEEEEEETT
T ss_pred EeC----CCCCcceEEEecCCCCEEEecCC----------------CCCeEEEEecCCCceEEEEeCCCCCceEEEEecC
Confidence 432 34579999999975559999954 1368999999866555544 45678999999998
Q ss_pred CCeEEEEecCCceEEEEEccCCCCCcceeeeeC---CCCCCeeEECCCCCEEEEEecCCc
Q 046018 163 RTFILIAETSNCRILRFWLHGPNSGKQDVFAEL---PGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 163 ~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
+++|||++...++|++++++|... ..+... -..|.+|+++. ++||++++..+.
T Consensus 569 ~~~LYwaD~~~~~I~~~d~dG~~~---~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~ 624 (791)
T 3m0c_C 569 SGRLYWVDSKLHSISSIDVNGGNR---KTILEDEKRLAHPFSLAVFE-DKVFWTDIINEA 624 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSC---EEEEECTTTTSSEEEEEEET-TEEEEEETTTTE
T ss_pred CCeEEEEeCCCCcEEEEecCCCce---EEEecCCCccCCCCEEEEeC-CEEEEEECCCCE
Confidence 888999999999999999987522 223221 13577888864 589999988775
No 50
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.65 E-value=8.8e-15 Score=127.58 Aligned_cols=167 Identities=14% Similarity=0.153 Sum_probs=109.9
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCC--eEEEEEeec----CCccccCCcceEEeC-CCCEEEEEeCCCchhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGG--LATQLVTEA----AGQPLRFTNDLDIDE-HKGVIYFTDSSTSFQR 118 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~--~~~~~~~~~----~~~~~~~~~~i~~d~-~g~~l~v~~~~~~~~~ 118 (310)
..|.+|++++ +|+||+++... .|.++++++. .+..+.... .......|++|++++ +|+ +|+++..
T Consensus 91 ~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~----- 163 (329)
T 3fvz_A 91 YLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGY----- 163 (329)
T ss_dssp SSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECS-----
T ss_pred CCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCC-----
Confidence 5899999999 89999999874 5999999876 333332211 022345799999999 888 9999941
Q ss_pred hhhhhhhhcCCCCceEEEEeCCCCeEEEEec----------CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCc
Q 046018 119 RQFMSSILSGDKTGRLLKYEKTTKEVTILLQ----------GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGK 188 (310)
Q Consensus 119 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~----------~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~ 188 (310)
..++|.+|++++.....+.. .+..|++|+++|+++.|||++..+++|.+|++++++.
T Consensus 164 -----------~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~-- 230 (329)
T 3fvz_A 164 -----------CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF-- 230 (329)
T ss_dssp -----------SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--
T ss_pred -----------CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--
Confidence 16789999976444443321 1234999999999667999999999999999873211
Q ss_pred ceeeee--CCCCCCeeEEC------CCCCEEEEEecCCccceeeeeec-cccccEEeec
Q 046018 189 QDVFAE--LPGFPDNVRSN------SNGEFWVALHAKKGLFGKLILLN-SWLGKTLLKL 238 (310)
Q Consensus 189 ~~~~~~--~~~~p~~i~~d------~~G~l~va~~~~~~~~~~~i~~~-~~~g~~~~~~ 238 (310)
...+.. ....|.++++. .+|++|+++..... +..+ ...++.+..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~-----v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 231 VREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQ-----GFVMNFSSGEIIDVF 284 (329)
T ss_dssp EEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCC-----EEEEETTTCCEEEEE
T ss_pred EEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcE-----EEEEEcCCCeEEEEE
Confidence 111211 11233444444 46666666555444 3333 3567766654
No 51
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.65 E-value=1.5e-13 Score=123.52 Aligned_cols=148 Identities=12% Similarity=0.099 Sum_probs=108.1
Q ss_pred ccceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhh
Q 046018 45 ICGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 45 ~~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~ 123 (310)
....|.+|++++ +|+||+++.. +.|.++|++++.++.+... ...+. ++++++|++||+++..
T Consensus 129 ~~~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-----~~~~~-ia~~~~g~~l~~~d~~---------- 191 (409)
T 3hrp_A 129 KFKYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPG-----FKGGK-PAVTKDKQRVYSIGWE---------- 191 (409)
T ss_dssp CCCCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEET-----CCBCB-CEECTTSSEEEEEBSS----------
T ss_pred ccCCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeecc-----CCCCc-eeEecCCCcEEEEecC----------
Confidence 357899999998 8999999987 4599999998887766432 23466 9999999988988743
Q ss_pred hhhcCCCCceEEEEeCCCCeE-EEE----ecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee----
Q 046018 124 SILSGDKTGRLLKYEKTTKEV-TIL----LQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE---- 194 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~-~~~----~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~---- 194 (310)
....|++++++++.. ..+ ......|++++++|+++.||+++. +++|++|+++++. ...+..
T Consensus 192 ------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~---~~~~~~~~~~ 261 (409)
T 3hrp_A 192 ------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQE---VTLIKQLELS 261 (409)
T ss_dssp ------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCC---EEEEEECCCC
T ss_pred ------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCC---EEEEeccccc
Confidence 123799999876543 222 124567999999996667999764 7899999987542 222311
Q ss_pred --CCCCCC-eeEECC-CCCEEEEEecCCc
Q 046018 195 --LPGFPD-NVRSNS-NGEFWVALHAKKG 219 (310)
Q Consensus 195 --~~~~p~-~i~~d~-~G~l~va~~~~~~ 219 (310)
....|. ++++++ +|+||+++...+.
T Consensus 262 g~~~~~P~~~ia~~p~~g~lyv~d~~~~~ 290 (409)
T 3hrp_A 262 GSLGTNPGPYLIYYFVDSNFYMSDQNLSS 290 (409)
T ss_dssp SCCCCSSCCEEEEETTTTEEEEEETTTTE
T ss_pred CCCCCCccccEEEeCCCCEEEEEeCCCCE
Confidence 111255 999999 5899999877664
No 52
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=7.5e-15 Score=132.74 Aligned_cols=152 Identities=10% Similarity=0.136 Sum_probs=113.3
Q ss_pred cceeceEEEeC-CCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 46 CGRPLGIRFDK-KTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 46 ~~~p~gl~~d~-~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
...|.+|++|+ ++++||+++..+.|.++|++++.++.+.. ....|++|+++++|++||+++....
T Consensus 136 ~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-----~~~~P~~ia~d~~G~~lyvad~~~~--------- 201 (430)
T 3tc9_A 136 FGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-----GLSKVRTICWTHEADSMIITNDQNN--------- 201 (430)
T ss_dssp CSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-----CCSCEEEEEECTTSSEEEEEECCSC---------
T ss_pred CCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-----CCCCcceEEEeCCCCEEEEEeCCCC---------
Confidence 46899999996 37999999987669999999888765543 3457999999999998999996421
Q ss_pred hhcCCCCceEEEEeCCCCeE--EEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC--CCCCC
Q 046018 125 ILSGDKTGRLLKYEKTTKEV--TILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL--PGFPD 200 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~--~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~p~ 200 (310)
.....++.++++++.. ..+ .....|++++++|+++.||+++..+++|++|++++.. ...+... ...|.
T Consensus 202 ----~~~~~v~~~~~~g~~~~~~~l-~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~---~~~~~~~~~~~~P~ 273 (430)
T 3tc9_A 202 ----NDRPNNYILTRESGFKVITEL-TKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE---TTPLFTIQDSGWEF 273 (430)
T ss_dssp ----TTSEEEEEEEGGGTSCSEEEE-EECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE---EEEEEECSSSSCCE
T ss_pred ----cccceEEEEeCCCceeeeeee-ccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc---EEEEEEcCCCCcce
Confidence 1123567777654321 222 2467899999999545599999999999999987542 2122222 24699
Q ss_pred eeEECCCCC-EEEEEecCCc
Q 046018 201 NVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 201 ~i~~d~~G~-l~va~~~~~~ 219 (310)
+++++++|+ ||+++...+.
T Consensus 274 gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 274 HIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp EEEECTTSSEEEEEETTTTE
T ss_pred eEEEcCCCCEEEEEECCCCE
Confidence 999999998 9999987775
No 53
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.64 E-value=2.4e-13 Score=116.69 Aligned_cols=212 Identities=7% Similarity=0.005 Sum_probs=142.3
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.-+.|.+++++++.||+++... .|+++|+++++.+.+ .. ...+.+++++++|+ +|++.
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~-----~~~~~~i~~~~dG~-l~v~~-------------- 71 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-TM-----DAPVSSVALRQSGG-YVATI-------------- 71 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-EC-----SSCEEEEEEBTTSS-EEEEE--------------
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-eC-----CCceEEEEECCCCC-EEEEE--------------
Confidence 4677999998778999999874 599999998876433 21 13578999999999 99987
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecC-----CcccceEEEecCCCeEEEEec-----------CCceEEEEEccCCCCCcc
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQG-----LAFANGVALSRDRTFILIAET-----------SNCRILRFWLHGPNSGKQ 189 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~-----~~~~~gi~~~~d~~~lyv~~~-----------~~~~i~~~~~~~~~~~~~ 189 (310)
...|++||+++++.+.+... ...+++++++|||+ +|+++. ..++|+++++++. .
T Consensus 72 -----~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~----~ 141 (297)
T 3g4e_A 72 -----GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH----V 141 (297)
T ss_dssp -----TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC----E
T ss_pred -----CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC----E
Confidence 45799999998888765432 23478999999998 888763 2358888886532 2
Q ss_pred eeeeeCCCCCCeeEECCCCC-EEEEEecCCccceeeeeecc---ccccE-----EeeccchhhhhcccccCCCC------
Q 046018 190 DVFAELPGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLNS---WLGKT-----LLKLPLSFRQLHSLLVGGKP------ 254 (310)
Q Consensus 190 ~~~~~~~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~---~~g~~-----~~~~~~~~~~~~~~~~~~~~------ 254 (310)
..+......|++++++++|+ ||+++...+. |..++ .+|.. +..++.....|.++++....
T Consensus 142 ~~~~~~~~~pngi~~spdg~~lyv~~~~~~~-----i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 142 KKYFDQVDISNGLDWSLDHKIFYYIDSLSYS-----VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp EEEEEEESBEEEEEECTTSCEEEEEEGGGTE-----EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred EEEeeccccccceEEcCCCCEEEEecCCCCc-----EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 22222224689999999996 8888876665 33332 44443 22222212234444443322
Q ss_pred --ceEEEEECCC-CCEEEEEEcCCCCeecceeEEEEe---CCEEEEecCC
Q 046018 255 --HATAIKLSEK-GEVLEVLEDCEGKTLSFISEVEEK---DGQLWMGSVL 298 (310)
Q Consensus 255 --~~~~~~~d~~-g~~~~~~~~~~g~~~~~~~~~~~~---~g~l~vgs~~ 298 (310)
...+.+++++ |+++..+..+. ..++.++.. .++||+++..
T Consensus 217 ~~~~~v~~~d~~tG~~~~~i~~p~----~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 217 YNGGRVIRLDPVTGKRLQTVKLPV----DKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp ETTTEEEEECTTTCCEEEEEECSS----SBEEEEEEESGGGCEEEEEEBC
T ss_pred cCCCEEEEEcCCCceEEEEEECCC----CCceEEEEeCCCCCEEEEEcCC
Confidence 2346678886 78777776543 235666554 3699999864
No 54
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.63 E-value=1.4e-14 Score=131.00 Aligned_cols=154 Identities=13% Similarity=0.108 Sum_probs=109.7
Q ss_pred cceeceEEEeCC--CCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhh
Q 046018 46 CGRPLGIRFDKK--TGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 46 ~~~p~gl~~d~~--~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~ 123 (310)
+..|.+|++|++ +|+||+++..+.|++++++++.++.+.. ....|++|+++++|+ ||+++....
T Consensus 138 ~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-----~~~~P~giavd~dG~-lyVad~~~~-------- 203 (433)
T 4hw6_A 138 FDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-----NIGQCADVNFTLNGD-MVVVDDQSS-------- 203 (433)
T ss_dssp CSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-----CCSCEEEEEECTTCC-EEEEECCSC--------
T ss_pred cCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-----CCCCccEEEECCCCC-EEEEcCCCC--------
Confidence 468999999982 5999999987679999998888765533 345799999999999 999996421
Q ss_pred hhhcCCCCceEEEEeCCCCeE-EEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee-CCCCCCe
Q 046018 124 SILSGDKTGRLLKYEKTTKEV-TILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE-LPGFPDN 201 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~-~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~ 201 (310)
.....++.++.+++.. ......+..|++++++|+++.|||++..+++|++++++++... ...+.. ....+.+
T Consensus 204 -----~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~-~~~~~~~~~~~~~~ 277 (433)
T 4hw6_A 204 -----DTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT-EEEVMMDTKGSNFH 277 (433)
T ss_dssp -----TTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE-EEEEECSCCSSCEE
T ss_pred -----cccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE-EEEeccCCCCCccc
Confidence 0122466666543321 1122246789999999954459999999999999998743210 112221 1234567
Q ss_pred eEECCCCC-EEEEEecCCc
Q 046018 202 VRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 202 i~~d~~G~-l~va~~~~~~ 219 (310)
+++|++|+ ||+++...+.
T Consensus 278 ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp EEECTTSSEEEEEETTTTE
T ss_pred EEEeCCCCEEEEEeCCCCE
Confidence 99999998 9999988775
No 55
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.62 E-value=5.5e-14 Score=122.10 Aligned_cols=150 Identities=12% Similarity=0.119 Sum_probs=107.2
Q ss_pred cceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeecC--------C-------ccccCCcceEEeC-CCCEEE
Q 046018 46 CGRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAA--------G-------QPLRFTNDLDIDE-HKGVIY 108 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~--------~-------~~~~~~~~i~~d~-~g~~l~ 108 (310)
...|.++++++ +|+ +|+....++|+++++++++++.+..... + .....|.+|++++ +|+ ||
T Consensus 18 ~~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~ 95 (322)
T 2fp8_A 18 SYAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LY 95 (322)
T ss_dssp SSCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EE
T ss_pred cCCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EE
Confidence 36799999999 787 7776666779999999877765543110 0 0123689999997 787 99
Q ss_pred EEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEec-----CCcccceEEEec-CCCeEEEEecC----------
Q 046018 109 FTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQ-----GLAFANGVALSR-DRTFILIAETS---------- 172 (310)
Q Consensus 109 v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----~~~~~~gi~~~~-d~~~lyv~~~~---------- 172 (310)
|++. .+.++++|++++..+.+.. ....|+++++++ +|+ +|+++..
T Consensus 96 v~d~------------------~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~ 156 (322)
T 2fp8_A 96 IVDC------------------YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQ 156 (322)
T ss_dssp EEET------------------TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHH
T ss_pred EEEC------------------CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccce
Confidence 9984 2348999998766555432 134689999999 886 9999865
Q ss_pred -------CceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCC-EEEEEecCCc
Q 046018 173 -------NCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 173 -------~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~va~~~~~~ 219 (310)
.++|++++++++. ...+......|++|+++++|+ |||++...+.
T Consensus 157 ~~~~~~~~g~v~~~d~~~~~---~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~ 208 (322)
T 2fp8_A 157 IMDTSDKTGRLIKYDPSTKE---TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQ 208 (322)
T ss_dssp HHHHTCCCEEEEEEETTTTE---EEEEEEEESCCCEEEECTTSSEEEEEEGGGTE
T ss_pred ehcccCCCceEEEEeCCCCE---EEEeccCCccCcceEECCCCCEEEEEeCCCCe
Confidence 3689999976432 222222224689999999996 9999887654
No 56
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=2.4e-13 Score=116.33 Aligned_cols=227 Identities=13% Similarity=0.090 Sum_probs=144.3
Q ss_pred CccccccceeceEEEeCCCCc-EEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchh
Q 046018 40 PDIEHICGRPLGIRFDKKTGD-LYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQ 117 (310)
Q Consensus 40 ~~~~~~~~~p~gl~~d~~~g~-l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~ 117 (310)
+.+......|.++++++ +|+ ||+++.. .+|++++++++ .+.+.. +...|.+|+++++|+ +|+++..
T Consensus 21 ~~l~~~~~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~-----~~~~~~~l~~~~dg~-l~v~~~~---- 88 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ-LSPEMH-----PSHHQNGHCLNKQGH-LIACSHG---- 88 (296)
T ss_dssp EEEECCCSSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC-EEEEES-----SCSSEEEEEECTTCC-EEEEETT----
T ss_pred EEEecCCccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC-eEEEEC-----CCCCcceeeECCCCc-EEEEecC----
Confidence 44444456788999999 776 7777765 56999999988 554432 224688999999999 9999843
Q ss_pred hhhhhhhhhcCCCCceEEEEeCCCCeEEEEecC-----CcccceEEEecCCCeEEEEec-----------------CCce
Q 046018 118 RRQFMSSILSGDKTGRLLKYEKTTKEVTILLQG-----LAFANGVALSRDRTFILIAET-----------------SNCR 175 (310)
Q Consensus 118 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-----~~~~~gi~~~~d~~~lyv~~~-----------------~~~~ 175 (310)
.+.|++||+++++.+.+... ...|++++++|+|+ +|++++ ..+.
T Consensus 89 -------------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~ 154 (296)
T 3e5z_A 89 -------------LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRW 154 (296)
T ss_dssp -------------TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCE
T ss_pred -------------CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcE
Confidence 56899999977887765421 23578999999998 899753 2458
Q ss_pred EEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCCccceeeeeeccc--cccE---Eeeccchhhhhccccc
Q 046018 176 ILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSW--LGKT---LLKLPLSFRQLHSLLV 250 (310)
Q Consensus 176 i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~--~g~~---~~~~~~~~~~~~~~~~ 250 (310)
|+++++++ ....+......|.+++++++|++++++...+. +..++. .|++ ...+......|.++++
T Consensus 155 l~~~~~~g----~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~-----i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~ 225 (296)
T 3e5z_A 155 VFRLAPDG----TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNA-----THRYCLNARGETEYQGVHFTVEPGKTDGLRV 225 (296)
T ss_dssp EEEECTTS----CEEEEECCCSSEEEEEECTTSCEEEEETTTTE-----EEEEEECSSSCEEEEEEEECCSSSCCCSEEE
T ss_pred EEEECCCC----CEEEeecCCCCCccEEECCCCCEEEEeCCCCe-----EEEEEECCCCcCcCCCeEeeCCCCCCCeEEE
Confidence 99998662 22333333356899999999998776665554 444432 3443 1221112223344444
Q ss_pred CCCCceEEEEECCCCCEEEEEEcCCCCeecc------eeEEEEe---CCEEEEecCCCCeEEEeccc
Q 046018 251 GGKPHATAIKLSEKGEVLEVLEDCEGKTLSF------ISEVEEK---DGQLWMGSVLMPFIGIYNRF 308 (310)
Q Consensus 251 ~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~------~~~~~~~---~g~l~vgs~~~~~i~~~~~~ 308 (310)
...+. +++.- +.-+..+ +++|..+.. ++.++.. .+.||+++ .++|++++.-
T Consensus 226 d~~G~-l~v~~---~~~v~~~-~~~g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t--~~~l~~~~~~ 285 (296)
T 3e5z_A 226 DAGGL-IWASA---GDGVHVL-TPDGDELGRVLTPQTTSNLCFGGPEGRTLYMTV--STEFWSIETN 285 (296)
T ss_dssp BTTSC-EEEEE---TTEEEEE-CTTSCEEEEEECSSCCCEEEEESTTSCEEEEEE--TTEEEEEECS
T ss_pred CCCCC-EEEEc---CCeEEEE-CCCCCEEEEEECCCCceeEEEECCCCCEEEEEc--CCeEEEEEcc
Confidence 43333 33332 2233444 345643322 3445442 24799998 9999998763
No 57
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.61 E-value=3.3e-13 Score=116.27 Aligned_cols=221 Identities=13% Similarity=0.170 Sum_probs=141.7
Q ss_pred cccccceeceEEEeCCCCc-EEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhh
Q 046018 42 IEHICGRPLGIRFDKKTGD-LYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRR 119 (310)
Q Consensus 42 ~~~~~~~p~gl~~d~~~g~-l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~ 119 (310)
+......+.|.++++ +|+ ||+++.. ++|++++++ +..+.+.. +...+++++++++|+ +|+++..
T Consensus 40 l~~~~~~~egp~~~~-~g~~l~~~d~~~~~i~~~~~~-g~~~~~~~-----~~~~~~gl~~d~dG~-l~v~~~~------ 105 (305)
T 3dr2_A 40 LYDQATWSEGPAWWE-AQRTLVWSDLVGRRVLGWRED-GTVDVLLD-----ATAFTNGNAVDAQQR-LVHCEHG------ 105 (305)
T ss_dssp EECCCSSEEEEEEEG-GGTEEEEEETTTTEEEEEETT-SCEEEEEE-----SCSCEEEEEECTTSC-EEEEETT------
T ss_pred EecCCcCccCCeEeC-CCCEEEEEECCCCEEEEEeCC-CCEEEEeC-----CCCccceeeECCCCC-EEEEECC------
Confidence 333445678999999 665 8888776 469999985 44544432 224689999999999 9999843
Q ss_pred hhhhhhhcCCCCceEEEEeCCCCeEEEEecC-----CcccceEEEecCCCeEEEEec-----------------CCceEE
Q 046018 120 QFMSSILSGDKTGRLLKYEKTTKEVTILLQG-----LAFANGVALSRDRTFILIAET-----------------SNCRIL 177 (310)
Q Consensus 120 ~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-----~~~~~gi~~~~d~~~lyv~~~-----------------~~~~i~ 177 (310)
.++|++++++ ++.+.+... ...|+.+++++||+ +|+++. ..+.|+
T Consensus 106 -----------~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~ 172 (305)
T 3dr2_A 106 -----------RRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVY 172 (305)
T ss_dssp -----------TTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEE
T ss_pred -----------CCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEE
Confidence 5679999987 666655421 24588999999998 999753 136899
Q ss_pred EEEccCCCCCcceeeeeCCCCCCeeEECCCCC-EEEEEecC-----CccceeeeeeccccccEEe----eccchhhhhcc
Q 046018 178 RFWLHGPNSGKQDVFAELPGFPDNVRSNSNGE-FWVALHAK-----KGLFGKLILLNSWLGKTLL----KLPLSFRQLHS 247 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~va~~~~-----~~~~~~~i~~~~~~g~~~~----~~~~~~~~~~~ 247 (310)
+++++++.. ..+.. ...|++++++++|+ ||+++... +. +..++..+..+. ....+...+.+
T Consensus 173 ~~d~~~g~~---~~~~~-~~~p~gl~~spdg~~lyv~~~~~~~~~~~~-----i~~~~~~~~~l~~~~~~~~~~~~~pdg 243 (305)
T 3dr2_A 173 RLPPDGSPL---QRMAD-LDHPNGLAFSPDEQTLYVSQTPEQGHGSVE-----ITAFAWRDGALHDRRHFASVPDGLPDG 243 (305)
T ss_dssp EECSSSCCC---EEEEE-ESSEEEEEECTTSSEEEEEECCC---CCCE-----EEEEEEETTEEEEEEEEECCSSSCCCS
T ss_pred EEcCCCCcE---EEEec-CCCCcceEEcCCCCEEEEEecCCcCCCCCE-----EEEEEecCCCccCCeEEEECCCCCCCe
Confidence 998864322 22222 24689999999996 89988752 32 444443211110 01111112223
Q ss_pred c--------ccCCCCceEEEEECCCCCEEEEEEcCCCCeecceeEEEE--eCCEEEEecCCCCeEEEecc
Q 046018 248 L--------LVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFISEVEE--KDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 248 ~--------~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~--~~g~l~vgs~~~~~i~~~~~ 307 (310)
+ +++. . ..+.+++++|+.+..+..+.+ ++.++. ..+.||+++ ..+|+++++
T Consensus 244 i~~d~~G~lwv~~-~-~gv~~~~~~g~~~~~~~~~~~-----~~~~~f~~d~~~L~it~--~~~l~~~~~ 304 (305)
T 3dr2_A 244 FCVDRGGWLWSSS-G-TGVCVFDSDGQLLGHIPTPGT-----ASNCTFDQAQQRLFITG--GPCLWMLPL 304 (305)
T ss_dssp EEECTTSCEEECC-S-SEEEEECTTSCEEEEEECSSC-----CCEEEECTTSCEEEEEE--TTEEEEEEC
T ss_pred EEECCCCCEEEec-C-CcEEEECCCCCEEEEEECCCc-----eeEEEEeCCCCEEEEEc--CCeEEEEEC
Confidence 2 3333 1 246788999998888775542 333433 456899998 468888764
No 58
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.61 E-value=4.4e-13 Score=112.41 Aligned_cols=164 Identities=13% Similarity=0.108 Sum_probs=113.1
Q ss_pred eeceEEEeCCCCcEEEEECC---CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAY---LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~---~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
.|+||++++ ++.||+++.. +.|.++|+.++++....... ...++.+++++ |++||+++..
T Consensus 22 f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~---~~~fgeGi~~~--g~~lyv~t~~----------- 84 (266)
T 2iwa_A 22 FTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMD---DSYFGEGLTLL--NEKLYQVVWL----------- 84 (266)
T ss_dssp CEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECC---TTCCEEEEEEE--TTEEEEEETT-----------
T ss_pred CcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecC---CCcceEEEEEe--CCEEEEEEec-----------
Confidence 578999998 6899999853 45999999999865443321 12244566766 4459999854
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC--C-CCCCe
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL--P-GFPDN 201 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~-~~p~~ 201 (310)
.+.++.+|+++.+...-.+-. .|.|+.+++|+++||+++ +++.|+.+|+++.+....-.+... + ..|+.
T Consensus 85 ------~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 85 ------KNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp ------CSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred ------CCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 788999999887655433222 578888999999999997 689999999875322111111111 1 24677
Q ss_pred eEECCCCCEEEEEecCCccceeeeeeccccccEEeeccch
Q 046018 202 VRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLS 241 (310)
Q Consensus 202 i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~ 241 (310)
+.+. +|.||++.+..+.+ ..++..+++.+..++++
T Consensus 157 le~~-dg~lyvn~~~~~~V----~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 157 LEYI-NGEVWANIWQTDCI----ARISAKDGTLLGWILLP 191 (266)
T ss_dssp EEEE-TTEEEEEETTSSEE----EEEETTTCCEEEEEECH
T ss_pred EEEE-CCEEEEecCCCCeE----EEEECCCCcEEEEEECC
Confidence 8777 78999998776654 45566677777776654
No 59
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.60 E-value=8.1e-13 Score=114.43 Aligned_cols=234 Identities=10% Similarity=0.097 Sum_probs=139.9
Q ss_pred ceeceEEEeCCCCc-EEEEECC-CceEEEeCCCCeE-EEEEeecCCccccCCcc-eEEeCCCCEEEEEeCCCchhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAY-LGFQVVGPEGGLA-TQLVTEAAGQPLRFTND-LDIDEHKGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~-~gi~~~d~~~~~~-~~~~~~~~~~~~~~~~~-i~~d~~g~~l~v~~~~~~~~~~~~~ 122 (310)
..| ++++++ +|+ ||++... ..|+.+|.+++++ ...... ...|.. ++++|+|+++| +....
T Consensus 41 ~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~-~~~~~-------- 104 (331)
T 3u4y_A 41 DFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE-----GQSSMADVDITPDDQFAV-TVTGL-------- 104 (331)
T ss_dssp CEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEE-----CSSCCCCEEECTTSSEEE-ECCCS--------
T ss_pred Ccc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEeccc-----CCCCccceEECCCCCEEE-EecCC--------
Confidence 455 999999 665 8998885 4599999988875 322221 235667 99999999666 43220
Q ss_pred hhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCce-EEEEEccCCC-CCcc-eeeeeCCCCC
Q 046018 123 SSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCR-ILRFWLHGPN-SGKQ-DVFAELPGFP 199 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~-i~~~~~~~~~-~~~~-~~~~~~~~~p 199 (310)
...+.|..||.++++..........|++++++||+++||+++...+. |.+|+.+... .... .........|
T Consensus 105 ------~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~ 178 (331)
T 3u4y_A 105 ------NHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRP 178 (331)
T ss_dssp ------SSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSE
T ss_pred ------CCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCc
Confidence 01128999999888776655556678999999999989999887777 9999887421 1111 1111223468
Q ss_pred CeeEECCCCC-EEEEEecCCccceeeeeec-cccccE---EeeccchhhhhcccccCCCCc---------eEEEEECCC-
Q 046018 200 DNVRSNSNGE-FWVALHAKKGLFGKLILLN-SWLGKT---LLKLPLSFRQLHSLLVGGKPH---------ATAIKLSEK- 264 (310)
Q Consensus 200 ~~i~~d~~G~-l~va~~~~~~~~~~~i~~~-~~~g~~---~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~~- 264 (310)
.+++++++|+ +|++....+. +..+ ...++. +..++.. ..+..+.+...+. ..+..+|..
T Consensus 179 ~~~~~spdg~~l~v~~~~~~~-----v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 179 FNITFTPDGNFAFVANLIGNS-----IGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp EEEEECTTSSEEEEEETTTTE-----EEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred cceEECCCCCEEEEEeCCCCe-----EEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 8999999997 8888876655 3333 345555 5444432 2223333332222 223334433
Q ss_pred CCE--EEEEEcC---CCCeecceeEEEE--eCCEEEEecCCCCeEEEeccc
Q 046018 265 GEV--LEVLEDC---EGKTLSFISEVEE--KDGQLWMGSVLMPFIGIYNRF 308 (310)
Q Consensus 265 g~~--~~~~~~~---~g~~~~~~~~~~~--~~g~l~vgs~~~~~i~~~~~~ 308 (310)
+++ +..+... ++........+.. .+..||+++...+.|.++++-
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 253 GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 222 1111110 0111111112232 345789998888889988763
No 60
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.60 E-value=3.6e-13 Score=117.00 Aligned_cols=233 Identities=9% Similarity=0.104 Sum_probs=145.5
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..|.++++++ +|+||+++.. .+|+++|+++++++.+... ....+.+|+++++|+ +|+++....
T Consensus 45 ~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~dg~-l~v~~~~~~---------- 108 (333)
T 2dg1_A 45 LQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVS----HKANPAAIKIHKDGR-LFVCYLGDF---------- 108 (333)
T ss_dssp CCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEEC----SSSSEEEEEECTTSC-EEEEECTTS----------
T ss_pred ccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeC----CCCCcceEEECCCCc-EEEEeCCCC----------
Confidence 4678999998 8999998765 4699999998887655422 124688999999999 999984310
Q ss_pred hcCCCCceEEEEeCCCCeEEEEec---CCcccceEEEecCCCeEEEEecC------CceEEEEEccCCCCCcceeeeeCC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQ---GLAFANGVALSRDRTFILIAETS------NCRILRFWLHGPNSGKQDVFAELP 196 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~---~~~~~~gi~~~~d~~~lyv~~~~------~~~i~~~~~~~~~~~~~~~~~~~~ 196 (310)
...+.|++||+++++.+.+.. ....+++++++|+++ +|+++.. ...|++++++++. ...+....
T Consensus 109 ---~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~ 181 (333)
T 2dg1_A 109 ---KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRT---VTPIIQNI 181 (333)
T ss_dssp ---SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCC---EEEEEEEE
T ss_pred ---CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCE---EEEeecCC
Confidence 012579999998887664332 234588999999997 8888654 4689999876432 22222212
Q ss_pred CCCCeeEECCCCC-EEEEEecCCccceeeeeeccc--cccEEee----c--cch-hhhhcccccCCC--------CceEE
Q 046018 197 GFPDNVRSNSNGE-FWVALHAKKGLFGKLILLNSW--LGKTLLK----L--PLS-FRQLHSLLVGGK--------PHATA 258 (310)
Q Consensus 197 ~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~~--~g~~~~~----~--~~~-~~~~~~~~~~~~--------~~~~~ 258 (310)
..|.+++++++|+ ||+++...+. +..++. .++.+.. . ..+ ...+.++++... ....+
T Consensus 182 ~~~~~i~~~~dg~~l~v~~~~~~~-----i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v 256 (333)
T 2dg1_A 182 SVANGIALSTDEKVLWVTETTANR-----LHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRV 256 (333)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTE-----EEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEE
T ss_pred CcccceEECCCCCEEEEEeCCCCe-----EEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 3578999999996 8998765554 444433 3332211 0 000 012333333222 22345
Q ss_pred EEECCCCCEEEEEEcCCC--CeecceeEEEEe-C-CEEEEecCCC-----CeEEEecc
Q 046018 259 IKLSEKGEVLEVLEDCEG--KTLSFISEVEEK-D-GQLWMGSVLM-----PFIGIYNR 307 (310)
Q Consensus 259 ~~~d~~g~~~~~~~~~~g--~~~~~~~~~~~~-~-g~l~vgs~~~-----~~i~~~~~ 307 (310)
.+++++++.+..+..+.. ..+..++.++.. + ++||+++... ..|+.++.
T Consensus 257 ~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 257 LVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp EEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred EEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 667888877777654321 011134555443 3 5899998752 36777654
No 61
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.58 E-value=5.2e-12 Score=110.06 Aligned_cols=190 Identities=12% Similarity=0.126 Sum_probs=126.6
Q ss_pred eccccccccCCCCCccccccceeceEEEeCCCCc-EEEEECCC-ceEEEeCCCCeEEEEEeecCCc-----cccCCcceE
Q 046018 27 TTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGD-LYIADAYL-GFQVVGPEGGLATQLVTEAAGQ-----PLRFTNDLD 99 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~-l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~-----~~~~~~~i~ 99 (310)
..+..+|..+.+..........|.++++++ +|+ +|++.... .|..+|.++++........... ....|.+++
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDLKPFGATINN-TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELV 147 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEE
T ss_pred ccEEEEcCCCCeEEEEEecCCCcceEEECC-CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEE
Confidence 346667765533222233345688999999 554 99998864 4999999888764433321110 011368899
Q ss_pred EeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEec-CCcccceEEEecCCCeEEEEecCCceEEE
Q 046018 100 IDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQ-GLAFANGVALSRDRTFILIAETSNCRILR 178 (310)
Q Consensus 100 ~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~ 178 (310)
++|+|+++|+++.. ..+.|+.||+++++...... ....|.+++++||++.||+++. ++.|++
T Consensus 148 ~s~dg~~l~~~~~~----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i~~ 210 (353)
T 3vgz_A 148 ADDATNTVYISGIG----------------KESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA-DGELIT 210 (353)
T ss_dssp EETTTTEEEEEEES----------------SSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT-TSEEEE
T ss_pred ECCCCCEEEEEecC----------------CCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC-CCeEEE
Confidence 99999988988732 26779999999887766554 4455899999999999998854 789999
Q ss_pred EEccCCCCCcceeeee----CCCCCCeeEECCCCC-EEEEEecCCccceeeeeec-cccccEEeeccch
Q 046018 179 FWLHGPNSGKQDVFAE----LPGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLN-SWLGKTLLKLPLS 241 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~----~~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~-~~~g~~~~~~~~~ 241 (310)
||...++. ...+.. ....+.+++++++|+ +|++....+. +..+ ...++.+..++.+
T Consensus 211 ~d~~~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-----v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 211 IDTADNKI--LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE-----VLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp EETTTTEE--EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE-----EEEEETTTCCEEEEEECS
T ss_pred EECCCCeE--EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE-----EEEEECCCCcEEEEEEcC
Confidence 99874321 111111 123456799999996 7887766554 3443 4567776666543
No 62
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.55 E-value=2.1e-12 Score=112.84 Aligned_cols=152 Identities=14% Similarity=0.155 Sum_probs=104.1
Q ss_pred ceeceEEEeCCCCcEEEEECC---CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY---LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~---~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~ 123 (310)
..|.++++++ +|+||++... ..|..++.+++..+.+.... .....|..++++|+|++||++...
T Consensus 40 ~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~--~~~~~p~~~a~spdg~~l~~~~~~---------- 106 (347)
T 3hfq_A 40 QNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVV--APGTPPAYVAVDEARQLVYSANYH---------- 106 (347)
T ss_dssp SCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEE--EESCCCSEEEEETTTTEEEEEETT----------
T ss_pred CCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEEEeeeee--cCCCCCEEEEECCCCCEEEEEeCC----------
Confidence 6788999999 8889988763 35888888877765543321 123468999999999988888743
Q ss_pred hhhcCCCCceEEEEeCC-CCeEEEEe---cC---------CcccceEEEecCCCeEEEEecCCceEEEEEcc-CCCCCcc
Q 046018 124 SILSGDKTGRLLKYEKT-TKEVTILL---QG---------LAFANGVALSRDRTFILIAETSNCRILRFWLH-GPNSGKQ 189 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~-~~~~~~~~---~~---------~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~-~~~~~~~ 189 (310)
.+.+..|+.+ ++..+.+. .. ...+++++++||++ +|+++...+.|.+|+.+ ++.....
T Consensus 107 -------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 107 -------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp -------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEE
T ss_pred -------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEe
Confidence 5667777763 34444322 11 12366899999999 99999888999999987 2222111
Q ss_pred eeeee-CCCCCCeeEECCCCC-EEEEEecCCc
Q 046018 190 DVFAE-LPGFPDNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 190 ~~~~~-~~~~p~~i~~d~~G~-l~va~~~~~~ 219 (310)
..+.. ....|..++++++|+ ||++....+.
T Consensus 179 ~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~ 210 (347)
T 3hfq_A 179 SVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQ 210 (347)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred eeEEcCCCCCCceEEECCCCCEEEEEeCCCCE
Confidence 11111 223678899999998 7777766554
No 63
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.54 E-value=8e-13 Score=113.60 Aligned_cols=154 Identities=16% Similarity=0.177 Sum_probs=107.9
Q ss_pred CccccccceeceEEEeCCCCcEEEE-------E-CCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCC-CCEEEEE
Q 046018 40 PDIEHICGRPLGIRFDKKTGDLYIA-------D-AYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEH-KGVIYFT 110 (310)
Q Consensus 40 ~~~~~~~~~p~gl~~d~~~g~l~v~-------~-~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~-g~~l~v~ 110 (310)
..+......|.++++++ +|+||++ + ..++|+++|+.+++++.+...........|.+++++++ |+ +|++
T Consensus 11 ~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~ 88 (314)
T 1pjx_A 11 TKVTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVA 88 (314)
T ss_dssp EEEECCCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEE
T ss_pred hhhhccCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEE
Confidence 33444456789999998 8999999 3 34569999988887765532100112246889999999 87 9999
Q ss_pred eCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEE-ecC-----CcccceEEEecCCCeEEEEecCC-----------
Q 046018 111 DSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTIL-LQG-----LAFANGVALSRDRTFILIAETSN----------- 173 (310)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-~~~-----~~~~~gi~~~~d~~~lyv~~~~~----------- 173 (310)
+. ...|++||++ ++.+.+ ... ...|++++++++|+ +|+++...
T Consensus 89 ~~------------------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 89 DM------------------RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp ET------------------TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTT
T ss_pred EC------------------CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccc
Confidence 83 2369999998 777655 321 23588999999987 89987654
Q ss_pred ----ceEEEEEccCCCCCcceeeeeCCCCCCeeEEC----CCC-CEEEEEecCCc
Q 046018 174 ----CRILRFWLHGPNSGKQDVFAELPGFPDNVRSN----SNG-EFWVALHAKKG 219 (310)
Q Consensus 174 ----~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d----~~G-~l~va~~~~~~ 219 (310)
+.|+++++++ ....+......|.+++++ ++| .||+++...+.
T Consensus 149 ~~~~~~l~~~~~~g----~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~ 199 (314)
T 1pjx_A 149 QEKFGSIYCFTTDG----QMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKK 199 (314)
T ss_dssp SSSCEEEEEECTTS----CEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTE
T ss_pred cCCCCeEEEECCCC----CEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCe
Confidence 6899998652 222222222357899999 999 68999876554
No 64
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.54 E-value=1.8e-11 Score=106.65 Aligned_cols=227 Identities=11% Similarity=0.072 Sum_probs=140.6
Q ss_pred cceeceEEEeCCCCcEEEEECC------C-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAY------L-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQR 118 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~------~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~ 118 (310)
...|.+++++++.+.||++... . .|+.+|.++++....... ...|.+++++++|+++|+++..
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~v~~~~----- 109 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-----DLKPFGATINNTTQTLWFGNTV----- 109 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-----SSCCCSEEEETTTTEEEEEETT-----
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-----CCCcceEEECCCCCEEEEEecC-----
Confidence 3578899999955579998865 2 399999998876544332 1258899999999989998843
Q ss_pred hhhhhhhhcCCCCceEEEEeCCCCeEEEEecC--Cc--------ccceEEEecCCCeEEEEec-CCceEEEEEccCCCCC
Q 046018 119 RQFMSSILSGDKTGRLLKYEKTTKEVTILLQG--LA--------FANGVALSRDRTFILIAET-SNCRILRFWLHGPNSG 187 (310)
Q Consensus 119 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~--------~~~gi~~~~d~~~lyv~~~-~~~~i~~~~~~~~~~~ 187 (310)
.+.|..||+++++....... .. .|.+++++||++.+|+++. ..+.|++||+.+.+.
T Consensus 110 ------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~- 176 (353)
T 3vgz_A 110 ------------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL- 176 (353)
T ss_dssp ------------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE-
T ss_pred ------------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce-
Confidence 57899999988876443221 11 2788999999999999874 467899999864311
Q ss_pred cceeeeeCCCCCCeeEECCCCC-EEEEEecCCccceeeeeeccccccEEeeccchh----hhhcccccCCCCce------
Q 046018 188 KQDVFAELPGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLNSWLGKTLLKLPLSF----RQLHSLLVGGKPHA------ 256 (310)
Q Consensus 188 ~~~~~~~~~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~------ 256 (310)
...+......|.+++++++|+ ||++.. .+.+ ...+...++....++.+. ..+..+.+...+..
T Consensus 177 -~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~i----~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 177 -KTAIQNTGKMSTGLALDSEGKRLYTTNA-DGEL----ITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS 250 (353)
T ss_dssp -EEEECCCCTTCCCCEEETTTTEEEEECT-TSEE----EEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES
T ss_pred -EEEecCCCCccceEEECCCCCEEEEEcC-CCeE----EEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC
Confidence 111211233588999999997 555544 4432 333445666665554421 11222222222221
Q ss_pred ---EEEEECC-CCCEEEEEEcCCCCeecceeEEEE-e-CCEEEEecCCCCeEEEecc
Q 046018 257 ---TAIKLSE-KGEVLEVLEDCEGKTLSFISEVEE-K-DGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 257 ---~~~~~d~-~g~~~~~~~~~~g~~~~~~~~~~~-~-~g~l~vgs~~~~~i~~~~~ 307 (310)
.+..+|. +++.+..+..+. ...+.. . +..+|+++..++.|.+++.
T Consensus 251 ~~~~v~~~d~~~~~~~~~~~~~~------~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 251 KAAEVLVVDTRNGNILAKVAAPE------SLAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp SSSEEEEEETTTCCEEEEEECSS------CCCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCEEEEEECCCCcEEEEEEcCC------CceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 2223332 233333333211 112322 2 4469999988899999885
No 65
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.53 E-value=2.8e-12 Score=111.02 Aligned_cols=235 Identities=10% Similarity=0.025 Sum_probs=141.9
Q ss_pred eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEE
Q 046018 21 WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDI 100 (310)
Q Consensus 21 W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~ 100 (310)
|+.... +.++|..+................++. ++.||++...++|+++|++ ++....... .......+++
T Consensus 74 ~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~----~~~~~~~~~~ 144 (330)
T 3hxj_A 74 YFGSDK--VYAINPDGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKT----KKAIYATPIV 144 (330)
T ss_dssp CCSSCE--EEEECCCGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEEC----SSCCCSCCEE
T ss_pred EEecCc--EEEECCCCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcC----CCceeeeeEE
Confidence 775444 777776442211111111112234444 6899999877789999998 543222121 1123567788
Q ss_pred eCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEE-EecCCcccceEEEecCCCeEEEEecCCceEEEE
Q 046018 101 DEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTI-LLQGLAFANGVALSRDRTFILIAETSNCRILRF 179 (310)
Q Consensus 101 d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~-~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~ 179 (310)
+++|+ +|+++. .+.|+++|++ ++... ..........+++++++. +|++. +.|+++
T Consensus 145 ~~~g~-l~vgt~------------------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t---~~l~~~ 200 (330)
T 3hxj_A 145 SEDGT-IYVGSN------------------DNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS---DKVYAI 200 (330)
T ss_dssp CTTSC-EEEECT------------------TSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES---SSEEEE
T ss_pred cCCCE-EEEEcC------------------CCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe---CEEEEE
Confidence 99999 999872 4789999998 55432 322233456677887877 88875 899999
Q ss_pred EccCCCCCcceeeee--CCCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcc--------cc
Q 046018 180 WLHGPNSGKQDVFAE--LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHS--------LL 249 (310)
Q Consensus 180 ~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~--------~~ 249 (310)
+.++. ..+.. .......+++|++|+||+++..++ +..++++++.+..++.+...... ++
T Consensus 201 d~~g~-----~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~g------l~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~ 269 (330)
T 3hxj_A 201 NPDGT-----EKWNFYAGYWTVTRPAISEDGTIYVTSLDGH------LYAINPDGTEKWRFKTGKRIESSPVIGNTDTIY 269 (330)
T ss_dssp CTTSC-----EEEEECCSSCCCSCCEECTTSCEEEEETTTE------EEEECTTSCEEEEEECSSCCCSCCEECTTSCEE
T ss_pred CCCCc-----EEEEEccCCcceeceEECCCCeEEEEcCCCe------EEEECCCCCEeEEeeCCCCccccceEcCCCeEE
Confidence 84332 11211 123457889999999999997655 66667777776655433222222 22
Q ss_pred cCCCCceEEEEECCCCCEEEEEEcCCCCeecceeEEEE-eCCEEEEecCCCCeEEEe
Q 046018 250 VGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFISEVEE-KDGQLWMGSVLMPFIGIY 305 (310)
Q Consensus 250 ~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~l~vgs~~~~~i~~~ 305 (310)
++.. ...+.++|++|+.+..+..+. ..+..++. .+|+||+|+. +..|...
T Consensus 270 v~t~-~ggl~~~d~~g~~~~~~~~~~----~~~~~~~~d~~g~l~~gt~-~G~~~~~ 320 (330)
T 3hxj_A 270 FGSY-DGHLYAINPDGTEKWNFETGS----WIIATPVIDENGTIYFGTR-NGKFYAL 320 (330)
T ss_dssp EECT-TCEEEEECTTSCEEEEEECSS----CCCSCCEECTTCCEEEECT-TSCEEEE
T ss_pred EecC-CCCEEEECCCCcEEEEEEcCC----ccccceEEcCCCEEEEEcC-CCeEEEE
Confidence 2222 235778898888777665432 12334444 6899999996 4444443
No 66
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.50 E-value=1.6e-10 Score=102.26 Aligned_cols=249 Identities=10% Similarity=0.110 Sum_probs=153.8
Q ss_pred ccccCcEEEEEeCCCCCeEEEEEeccccccccCCCCCccccccceeceEEEeCCCCc-EEEEECCC-ceEEEeCCCCeEE
Q 046018 4 TGVADGRILKWQGDELGWTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGD-LYIADAYL-GFQVVGPEGGLAT 81 (310)
Q Consensus 4 ~~~~~~~i~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~-l~v~~~~~-gi~~~d~~~~~~~ 81 (310)
++..++.|..|+.+...-+. .......+..+++++ +|+ ||++.... .|..+|..+++..
T Consensus 7 s~~~d~~v~v~d~~~~~~~~------------------~~~~~~~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~ 67 (391)
T 1l0q_A 7 ANSESDNISVIDVTSNKVTA------------------TIPVGSNPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVI 67 (391)
T ss_dssp EETTTTEEEEEETTTTEEEE------------------EEECSSSEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEE
T ss_pred EcCCCCEEEEEECCCCeEEE------------------EeecCCCcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEE
Confidence 45567888899886652110 001123477899999 664 67776554 4888999888765
Q ss_pred EEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEec
Q 046018 82 QLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSR 161 (310)
Q Consensus 82 ~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~ 161 (310)
..... . ..+.+++++|+|++||++... .+.|..||.++++..........+.+++++|
T Consensus 68 ~~~~~--~---~~v~~~~~spdg~~l~~~~~~-----------------~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~ 125 (391)
T 1l0q_A 68 ATVPA--G---SSPQGVAVSPDGKQVYVTNMA-----------------SSTLSVIDTTSNTVAGTVKTGKSPLGLALSP 125 (391)
T ss_dssp EEEEC--S---SSEEEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSEEEEEECT
T ss_pred EEEEC--C---CCccceEECCCCCEEEEEECC-----------------CCEEEEEECCCCeEEEEEeCCCCcceEEECC
Confidence 44332 1 267899999999988888643 6789999999887766555566789999999
Q ss_pred CCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCC-EEEEEecCCccceeeeeecc-ccccEEeecc
Q 046018 162 DRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLNS-WLGKTLLKLP 239 (310)
Q Consensus 162 d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~ 239 (310)
|++.||++....+.|++||+..++ ..........|..++++++|+ ||++....+. +..++ ..++....++
T Consensus 126 dg~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~-----v~~~d~~~~~~~~~~~ 197 (391)
T 1l0q_A 126 DGKKLYVTNNGDKTVSVINTVTKA---VINTVSVGRSPKGIAVTPDGTKVYVANFDSMS-----ISVIDTVTNSVIDTVK 197 (391)
T ss_dssp TSSEEEEEETTTTEEEEEETTTTE---EEEEEECCSSEEEEEECTTSSEEEEEETTTTE-----EEEEETTTTEEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEECCCCc---EEEEEecCCCcceEEECCCCCEEEEEeCCCCE-----EEEEECCCCeEEEEEe
Confidence 999898888888999999986431 111122234578899999996 5666655554 33333 4455544443
Q ss_pred chhhhhcccccCCCCceEE-----------EEECCC-CCEEEEEEcCCCCeecceeEEEEe--CCEEEEecCCCCeEEEe
Q 046018 240 LSFRQLHSLLVGGKPHATA-----------IKLSEK-GEVLEVLEDCEGKTLSFISEVEEK--DGQLWMGSVLMPFIGIY 305 (310)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~-----------~~~d~~-g~~~~~~~~~~g~~~~~~~~~~~~--~g~l~vgs~~~~~i~~~ 305 (310)
.. ..+.++.+...+..++ ..+|.. ++.+..+... ..+..+... +..||+++..++.|.++
T Consensus 198 ~~-~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~s~~~d~~v~v~ 271 (391)
T 1l0q_A 198 VE-AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-----PDPAGIAVTPDGKKVYVALSFXNTVSVI 271 (391)
T ss_dssp CS-SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-----SSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cC-CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC-----CCccEEEEccCCCEEEEEcCCCCEEEEE
Confidence 22 1222333332222222 222221 2222222211 123344433 34788887778889888
Q ss_pred cc
Q 046018 306 NR 307 (310)
Q Consensus 306 ~~ 307 (310)
+.
T Consensus 272 d~ 273 (391)
T 1l0q_A 272 DT 273 (391)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 67
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.50 E-value=3.9e-12 Score=111.96 Aligned_cols=168 Identities=14% Similarity=0.155 Sum_probs=106.4
Q ss_pred cceeceEEEeCC---CCcEEEEECC--------CceEEEeCCCC--e---EEEEEeecCCccccCCcceEEeCCCCEEEE
Q 046018 46 CGRPLGIRFDKK---TGDLYIADAY--------LGFQVVGPEGG--L---ATQLVTEAAGQPLRFTNDLDIDEHKGVIYF 109 (310)
Q Consensus 46 ~~~p~gl~~d~~---~g~l~v~~~~--------~gi~~~d~~~~--~---~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v 109 (310)
...|.||+++++ ++.|||+... ..|.+++.++. . .+.+.........+.+++|+++|||. ||+
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyv 150 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYI 150 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEE
Confidence 367999999994 5899999863 45999987654 2 22233322233456789999999999 999
Q ss_pred EeCCCchhhhhhhhhhhcCCCCceEEEEeCCCC--------eEEEEecCCcccceEEEecCCCeEEEEecCCce---EEE
Q 046018 110 TDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTK--------EVTILLQGLAFANGVALSRDRTFILIAETSNCR---ILR 178 (310)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--------~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~---i~~ 178 (310)
+.....- . . ...-.....|+|+++++++. ..+++..++..|+||+++|+...||+++...+. |.+
T Consensus 151 t~G~~~~-~-~--~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~ 226 (354)
T 3a9g_A 151 TTGDAAD-P-R--LAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNI 226 (354)
T ss_dssp ECCCTTC-G-G--GGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEE
T ss_pred EECCCCC-C-c--cccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEE
Confidence 9742100 0 0 00001123578999999753 245666778889999999954459999987654 555
Q ss_pred EEccCCCCC------------cceeeeeC---CCCCCeeEE-------CCCCCEEEEEecCCc
Q 046018 179 FWLHGPNSG------------KQDVFAEL---PGFPDNVRS-------NSNGEFWVALHAKKG 219 (310)
Q Consensus 179 ~~~~~~~~~------------~~~~~~~~---~~~p~~i~~-------d~~G~l~va~~~~~~ 219 (310)
+.. +...+ ........ ...|.++++ +.+|++|+++..+..
T Consensus 227 i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~ 288 (354)
T 3a9g_A 227 ILK-GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSM 288 (354)
T ss_dssp ECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTE
T ss_pred ecC-CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCE
Confidence 432 22111 00111111 235788888 467889998876654
No 68
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.50 E-value=9.3e-12 Score=109.49 Aligned_cols=162 Identities=15% Similarity=0.226 Sum_probs=107.5
Q ss_pred cccccceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeec-CCccccCCcceEEeCC---CCEEEEEeCCCchh
Q 046018 42 IEHICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEA-AGQPLRFTNDLDIDEH---KGVIYFTDSSTSFQ 117 (310)
Q Consensus 42 ~~~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~-~~~~~~~~~~i~~d~~---g~~l~v~~~~~~~~ 117 (310)
+......|.+|++++ +|+|||++..+.|.+++ +++.+.+.... .......|++|+++|+ +++||+++....
T Consensus 26 va~~l~~P~~ia~~p-dG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~-- 100 (352)
T 2ism_A 26 VVGGLEVPWALAFLP-DGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAE-- 100 (352)
T ss_dssp EECCCSCEEEEEECT-TSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECT--
T ss_pred EECCCCCceEEEEcC-CCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCC--
Confidence 344457899999999 89999999886799998 35554444321 1112457999999998 444999984210
Q ss_pred hhhhhhhhhcCCCCceEEEEeCCCCe---EEEEec-------CCcccceEEEecCCCeEEEEec-------------CCc
Q 046018 118 RRQFMSSILSGDKTGRLLKYEKTTKE---VTILLQ-------GLAFANGVALSRDRTFILIAET-------------SNC 174 (310)
Q Consensus 118 ~~~~~~~~~~~~~~g~v~~~d~~~~~---~~~~~~-------~~~~~~gi~~~~d~~~lyv~~~-------------~~~ 174 (310)
.....+|++++.++++ .+.+.. ....+++|+++|||. ||++.. ..+
T Consensus 101 ----------~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g 169 (352)
T 2ism_A 101 ----------GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGG 169 (352)
T ss_dssp ----------TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSS
T ss_pred ----------CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCce
Confidence 0012679999876542 222221 123578999999996 999853 236
Q ss_pred eEEEEEccCCCC----------CcceeeeeCCCCCCeeEECC-CCCEEEEEecCCc
Q 046018 175 RILRFWLHGPNS----------GKQDVFAELPGFPDNVRSNS-NGEFWVALHAKKG 219 (310)
Q Consensus 175 ~i~~~~~~~~~~----------~~~~~~~~~~~~p~~i~~d~-~G~l~va~~~~~~ 219 (310)
+|+++++++.-. ...+.++.--..|.++++|+ +|+||+++.....
T Consensus 170 ~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~ 225 (352)
T 2ism_A 170 KILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSG 225 (352)
T ss_dssp EEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC--
T ss_pred EEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCC
Confidence 899999886210 12233433224589999999 8999999987653
No 69
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.49 E-value=1.4e-12 Score=126.10 Aligned_cols=184 Identities=17% Similarity=0.175 Sum_probs=119.2
Q ss_pred ccCcEEEEEeCCCCC--eEEEEEeccccccccCCCCCcccc-------ccceeceEEEeCCCCcEEEEECCCceEEEeCC
Q 046018 6 VADGRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEH-------ICGRPLGIRFDKKTGDLYIADAYLGFQVVGPE 76 (310)
Q Consensus 6 ~~~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~-------~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~ 76 (310)
+....|.++.++.++ |+++ ..||.++++.+.++..... .......|..|+ +|+||+++...||+++|++
T Consensus 370 l~~~~v~~i~~d~~g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~lWigT~~~Gl~~~~~~ 447 (758)
T 3ott_A 370 LSHNRIRHIYEDKEQQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDT-AGQLWISTCLGGIFVVDKH 447 (758)
T ss_dssp CSCSCEEEEEECTTSCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECT-TSEEEEEESSSCEEEEEHH
T ss_pred CCCCceEEEEECCCCCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcC-CCCEEEEECCCceEEEccc
Confidence 344568889888877 9977 5699999988755544321 112345788888 8999999988899999875
Q ss_pred C------CeEE--EEEeecCCccccCCcceEEeCCCCEEEE--EeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEE
Q 046018 77 G------GLAT--QLVTEAAGQPLRFTNDLDIDEHKGVIYF--TDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTI 146 (310)
Q Consensus 77 ~------~~~~--~~~~~~~~~~~~~~~~i~~d~~g~~l~v--~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 146 (310)
+ ..+. .......+.+...+.+|+.|++|+ ||+ ++ .+.|+++|+++++++.
T Consensus 448 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~~~t-------------------~~Gl~~~d~~~~~~~~ 507 (758)
T 3ott_A 448 KLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGN-VWVLLYN-------------------NKGIDKINPRTREVTK 507 (758)
T ss_dssp HHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSC-EEEEETT-------------------CSSEEEEETTTTEEEE
T ss_pred cccccCCcceecccccccccccccceeeeEEEcCCCC-EEEEccC-------------------CCCcEEEeCCCCceEE
Confidence 3 2221 011111223334577899999999 999 44 3469999999888876
Q ss_pred EecC-C---cccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCC-CCCCeeEECCCCCEEEEEec
Q 046018 147 LLQG-L---AFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELP-GFPDNVRSNSNGEFWVALHA 216 (310)
Q Consensus 147 ~~~~-~---~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~G~l~va~~~ 216 (310)
+... . ..++.+..+.+|. ||++. . ++|.+|++......... ...++ ....++..+ +|+||+++..
T Consensus 508 ~~~~~~~~~~~~~~i~~d~~g~-lWigt-~-~Gl~~~~~~~~~~~~~~-~~gl~~~~i~~i~~~-~g~lWi~t~~ 577 (758)
T 3ott_A 508 LFADELTGEKSPNYLLCDEDGL-LWVGF-H-GGVMRINPKDESQQSIS-FGSFSNNEILSMTCV-KNSIWVSTTN 577 (758)
T ss_dssp ECTTTSCGGGCEEEEEECTTSC-EEEEE-T-TEEEEECC--CCCCBCC-CCC---CCEEEEEEE-TTEEEEEESS
T ss_pred ecCCCcCCCcccceEEECCCCC-EEEEe-c-CceEEEecCCCceEEec-ccCCCccceEEEEEC-CCCEEEECCC
Confidence 5422 1 2356788887777 88874 3 58999998754322111 11122 223456665 8999999954
No 70
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.48 E-value=2.2e-12 Score=124.84 Aligned_cols=261 Identities=14% Similarity=0.118 Sum_probs=148.4
Q ss_pred CcEEEEEeCCCCC--eEEEEEeccccccccCCC---CCccc-------cccceeceEEEeCCCCcEEEEECCCceEEEeC
Q 046018 8 DGRILKWQGDELG--WTEFAVTTSQRKECVRPF---APDIE-------HICGRPLGIRFDKKTGDLYIADAYLGFQVVGP 75 (310)
Q Consensus 8 ~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~---~~~~~-------~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~ 75 (310)
...|..+..+.++ |+++ ..|+.+++..+.. +.... .....+..|..|+ +|+||+++. .||.++++
T Consensus 323 ~~~v~~i~~D~~g~lWiGt-~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lWigt~-~GL~~~~~ 399 (758)
T 3ott_A 323 GNQFYSLFRDSKGFYWFGG-ANGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDK-EQQLWIATD-GSINRYDY 399 (758)
T ss_dssp CCBEEEEEECTTCCEEEEE-TTEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECT-TSCEEEEET-TEEEEEET
T ss_pred CceEEEEEEcCCCCEEEee-CCcceeecccccccceeEEeccCCcCCCCCCCceEEEEECC-CCCEEEEeC-CcHhhcCc
Confidence 4568888888777 9986 4688888765421 11111 1113456788888 899999985 58999999
Q ss_pred CCCeEEEEEeecCC--ccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCC------CeEE--
Q 046018 76 EGGLATQLVTEAAG--QPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTT------KEVT-- 145 (310)
Q Consensus 76 ~~~~~~~~~~~~~~--~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~------~~~~-- 145 (310)
++++++++...... .+...+.+|+.|++|+ ||+++. .+.|+++|+++ +.+.
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~------------------~~Gl~~~~~~~~~~~~~~~~~~~ 460 (758)
T 3ott_A 400 ATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTC------------------LGGIFVVDKHKLMQSTSGQYIAE 460 (758)
T ss_dssp TTTEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEES------------------SSCEEEEEHHHHHHCCSSEEECS
T ss_pred CCCcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEEC------------------CCceEEEccccccccCCcceecc
Confidence 99888766432111 1233567888999998 999983 35688998652 2221
Q ss_pred -EEe--cCCc--ccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee--CC--CCCCeeEECCCCCEEEEEec
Q 046018 146 -ILL--QGLA--FANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE--LP--GFPDNVRSNSNGEFWVALHA 216 (310)
Q Consensus 146 -~~~--~~~~--~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~--~~--~~p~~i~~d~~G~l~va~~~ 216 (310)
... ..+. ....|..+++|+ ||++....++|++|+++.+. ...+.. .. ..+..++.|++|+||+++..
T Consensus 461 ~~~~~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~~~---~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~ 536 (758)
T 3ott_A 461 QNYSVHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRTRE---VTKLFADELTGEKSPNYLLCDEDGLLWVGFHG 536 (758)
T ss_dssp EEECGGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTTTE---EEEECTTTSCGGGCEEEEEECTTSCEEEEETT
T ss_pred cccccccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCCCc---eEEecCCCcCCCcccceEEECCCCCEEEEecC
Confidence 111 1121 245677787777 88822234789999986432 222211 11 23567899999999999853
Q ss_pred CCccceeeeeeccccccEEeecc---chhhhhcccccCCCCceEEEEECCCCCEEEEEEcCCCC------eecceeEEEE
Q 046018 217 KKGLFGKLILLNSWLGKTLLKLP---LSFRQLHSLLVGGKPHATAIKLSEKGEVLEVLEDCEGK------TLSFISEVEE 287 (310)
Q Consensus 217 ~~~~~~~~i~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~------~~~~~~~~~~ 287 (310)
+ +.++++....+..+. ++...+.++.. ....+.+.-+ +| +..+...... +-..++.+..
T Consensus 537 -G------l~~~~~~~~~~~~~~~~gl~~~~i~~i~~--~~g~lWi~t~-~G--l~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (758)
T 3ott_A 537 -G------VMRINPKDESQQSISFGSFSNNEILSMTC--VKNSIWVSTT-NG--LWIIDRKTMDARQQNMTNKRFTSLLF 604 (758)
T ss_dssp -E------EEEECC--CCCCBCCCCC---CCEEEEEE--ETTEEEEEES-SC--EEEEETTTCCEEEC--CCCCCSEEEE
T ss_pred -c------eEEEecCCCceEEecccCCCccceEEEEE--CCCCEEEECC-CC--eEEEcCCCceeEEecCCCCceeeeEE
Confidence 4 566655443333331 11111112211 1112222221 22 2223221211 1112333332
Q ss_pred --eCCEEEEecCCCCeEEEeccc
Q 046018 288 --KDGQLWMGSVLMPFIGIYNRF 308 (310)
Q Consensus 288 --~~g~l~vgs~~~~~i~~~~~~ 308 (310)
.+|+||+|+ .+++..|++-
T Consensus 605 ~~~~G~l~fG~--~~Gl~~f~p~ 625 (758)
T 3ott_A 605 DPKEDCVYLGG--ADGFGISHSN 625 (758)
T ss_dssp ETTTTEEEEEC--BSEEEEEEC-
T ss_pred ECCCCcEEEec--CCceEEEChh
Confidence 379999998 9999998863
No 71
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=4.7e-12 Score=110.90 Aligned_cols=232 Identities=11% Similarity=0.136 Sum_probs=138.8
Q ss_pred ceeceEEEeCCCCcEEEEECC--C---ceEEEeCCCCeEEEEEee--cCCccccCCcceEEeCCCCEEEEEeCCCchhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY--L---GFQVVGPEGGLATQLVTE--AAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRR 119 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~--~---gi~~~d~~~~~~~~~~~~--~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~ 119 (310)
..|.++++++ +|++|++... . .|..++ ++++..+... .....+..|.+|++|++|+ ||+++...
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~----- 87 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGN----- 87 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHH-----
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCC-----
Confidence 5899999999 8999999653 2 488888 4555443211 1112356899999999998 99998430
Q ss_pred hhhhhhhcCCCCceEEEEeCCCCeEE-EEec--C----CcccceEEEecCCCeEEEEec---CCceEEEEEccCCCCCcc
Q 046018 120 QFMSSILSGDKTGRLLKYEKTTKEVT-ILLQ--G----LAFANGVALSRDRTFILIAET---SNCRILRFWLHGPNSGKQ 189 (310)
Q Consensus 120 ~~~~~~~~~~~~g~v~~~d~~~~~~~-~~~~--~----~~~~~gi~~~~d~~~lyv~~~---~~~~i~~~~~~~~~~~~~ 189 (310)
......+|++||+++++.. .+.- . ...+++++++++++.+|++++ ..+.|.+|+++++.....
T Consensus 88 -------~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 88 -------QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp -------HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE
T ss_pred -------CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE
Confidence 0011467999999888743 3321 1 135799999988778999998 788999999874321000
Q ss_pred ------------e------eee--e-------CCCCCCeeEECCCCC-EEEEEecCCccceeeeeecccc---------c
Q 046018 190 ------------D------VFA--E-------LPGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLNSWL---------G 232 (310)
Q Consensus 190 ------------~------~~~--~-------~~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~~~---------g 232 (310)
. .+. . ....|++|+++++|+ ||++...+.. +..++.. +
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~-----l~~~~~~~~~~~~~~~~ 235 (343)
T 2qe8_A 161 LQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTS-----MYRIKSADLSNLQLTDA 235 (343)
T ss_dssp CTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSE-----EEEEEHHHHTCTTCCHH
T ss_pred ecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCe-----EEEEEHHHhcCCCCChh
Confidence 0 000 0 012368899999994 8888876654 3333210 0
Q ss_pred cEEeeccc--hhhhhcccccCCC--------CceEEEEECC-CCCEEEEEEcCCCCeecceeEEEE-eCCEEEEecCCCC
Q 046018 233 KTLLKLPL--SFRQLHSLLVGGK--------PHATAIKLSE-KGEVLEVLEDCEGKTLSFISEVEE-KDGQLWMGSVLMP 300 (310)
Q Consensus 233 ~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~d~-~g~~~~~~~~~~g~~~~~~~~~~~-~~g~l~vgs~~~~ 300 (310)
+....+.. ....+.++++... ....+.++++ +|++......+ ....++.++. .+++||+.+...+
T Consensus 236 ~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~---~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 236 ELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE---KLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp HHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG---GGSCEEEEEECTTSCEEEEECCGG
T ss_pred hhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC---ceecCCeeEECCCCcEEEEeCccc
Confidence 00000000 0112333333322 2235667777 67654444322 2345677765 4689999986444
Q ss_pred eE
Q 046018 301 FI 302 (310)
Q Consensus 301 ~i 302 (310)
++
T Consensus 313 ~~ 314 (343)
T 2qe8_A 313 HS 314 (343)
T ss_dssp GS
T ss_pred cc
Confidence 43
No 72
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.47 E-value=7.8e-12 Score=107.73 Aligned_cols=214 Identities=12% Similarity=0.081 Sum_probs=135.2
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..|.++++++ +|+||+++.. +.|+++|++++.. .+... . ..|++|+++++|+ +|+++...
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~~-~~~~~--~---~~p~gia~~~dG~-l~vad~~~----------- 92 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQ-IHATV--E---GKVSGLAFTSNGD-LVATGWNA----------- 92 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEE-EEEEC--S---SEEEEEEECTTSC-EEEEEECT-----------
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCceE-EEEeC--C---CCceeEEEcCCCc-EEEEeccC-----------
Confidence 5789999999 8999999976 4599999987543 33222 1 2689999999999 99998431
Q ss_pred hcCCCCceEEEEeCCCCeEEEEec--CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcce---------eeee
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQ--GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQD---------VFAE 194 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~--~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~---------~~~~ 194 (310)
....|++++..+++.+.+.. ....++|++..+++ .+|+++..+++|++++++++.. ... ....
T Consensus 93 ----~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~-~v~~~~~~~~~~~~~~ 166 (306)
T 2p4o_A 93 ----DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSG-SIWLEHPMLARSNSES 166 (306)
T ss_dssp ----TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEE-EEEEECGGGSCSSTTC
T ss_pred ----CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcE-eEEEECCccccccccC
Confidence 12358999988888776542 34568899987655 5899998889999999764210 000 0000
Q ss_pred CCCCCCeeEECCCC-CEEEEEecCCccceeeeeecccc--ccE-----EeeccchhhhhcccccC--------CCCceEE
Q 046018 195 LPGFPDNVRSNSNG-EFWVALHAKKGLFGKLILLNSWL--GKT-----LLKLPLSFRQLHSLLVG--------GKPHATA 258 (310)
Q Consensus 195 ~~~~p~~i~~d~~G-~l~va~~~~~~~~~~~i~~~~~~--g~~-----~~~~~~~~~~~~~~~~~--------~~~~~~~ 258 (310)
....|++| +++| .||+++...+. |..++.. ++. +... ..|..+++. ......+
T Consensus 167 ~~~~pngi--s~dg~~lyv~d~~~~~-----I~~~~~~~~g~~~~~~~~~~~----~~P~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 167 VFPAANGL--KRFGNFLYVSNTEKML-----LLRIPVDSTDKPGEPEIFVEQ----TNIDDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp CSCSEEEE--EEETTEEEEEETTTTE-----EEEEEBCTTSCBCCCEEEEES----CCCSSEEEBTTCCEEEECBTTCCE
T ss_pred CCCcCCCc--CcCCCEEEEEeCCCCE-----EEEEEeCCCCCCCccEEEecc----CCCCCeEECCCCCEEEEeCCCCeE
Confidence 11357888 5565 69999987765 4444432 221 1111 123333333 2223456
Q ss_pred EEECCCCCEEEEEEcCCCCeecceeEEEEe-----CCEEEEecCC
Q 046018 259 IKLSEKGEVLEVLEDCEGKTLSFISEVEEK-----DGQLWMGSVL 298 (310)
Q Consensus 259 ~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~-----~g~l~vgs~~ 298 (310)
.+++++|+.......+.+ ...++.++.. .++||+++..
T Consensus 236 ~~~~~~G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 236 VRIAPDRSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEECTTCCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEECCCCCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCC
Confidence 677877766443222211 2456777653 3799999864
No 73
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.46 E-value=1.4e-10 Score=100.39 Aligned_cols=152 Identities=13% Similarity=0.109 Sum_probs=102.3
Q ss_pred ceeceEEEeCCCCc-EEEEECC-CceEEEeCC--CCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAY-LGFQVVGPE--GGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~-~gi~~~d~~--~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~ 122 (310)
..|.++++++ +|+ ||++... ..|..++.+ +++.+.+...... ..|..++++|+|+++|++...
T Consensus 38 ~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~--------- 104 (343)
T 1ri6_A 38 GQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP---GSLTHISTDHQGQFVFVGSYN--------- 104 (343)
T ss_dssp SCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS---SCCSEEEECTTSSEEEEEETT---------
T ss_pred CCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccC---CCCcEEEEcCCCCEEEEEecC---------
Confidence 4678899999 555 8888876 446665544 6666544332211 268999999999988888743
Q ss_pred hhhhcCCCCceEEEEeCCCCe---EEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccC-CCCCcce--eeee-C
Q 046018 123 SSILSGDKTGRLLKYEKTTKE---VTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHG-PNSGKQD--VFAE-L 195 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~---~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~-~~~~~~~--~~~~-~ 195 (310)
.+.|..||.+++. ..........+.+++++||++.+|+++...+.|.+|+.+. +...... .... .
T Consensus 105 --------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 176 (343)
T 1ri6_A 105 --------AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE 176 (343)
T ss_dssp --------TTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST
T ss_pred --------CCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC
Confidence 5678888873332 2223344556899999999999999987889999999874 3221111 1111 2
Q ss_pred CCCCCeeEECCCCC-EEEEEecCCc
Q 046018 196 PGFPDNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 196 ~~~p~~i~~d~~G~-l~va~~~~~~ 219 (310)
...|..++++++|+ +|++....+.
T Consensus 177 ~~~~~~~~~~pdg~~l~~~~~~~~~ 201 (343)
T 1ri6_A 177 GAGPRHMVFHPNEQYAYCVNELNSS 201 (343)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCCcceEEECCCCCEEEEEeCCCCE
Confidence 24678899999997 7777655443
No 74
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.46 E-value=3.3e-11 Score=104.75 Aligned_cols=212 Identities=10% Similarity=0.030 Sum_probs=136.3
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+.+.+++++++.||+++.. .+|+++|+++++.+.+. . . ..+.+++++++|+ +|++.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~--~---~~v~~i~~~~dg~-l~v~~-------------- 107 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-L--P---FMGSALAKISDSK-QLIAS-------------- 107 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-C--S---SCEEEEEEEETTE-EEEEE--------------
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-C--C---CcceEEEEeCCCe-EEEEE--------------
Confidence 456789999966889999876 46999999988765442 1 1 2578899999998 99987
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecC-----CcccceEEEecCCCeEEEEecC------CceEEEEEccCCCCCcceeeee
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQG-----LAFANGVALSRDRTFILIAETS------NCRILRFWLHGPNSGKQDVFAE 194 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~-----~~~~~gi~~~~d~~~lyv~~~~------~~~i~~~~~~~~~~~~~~~~~~ 194 (310)
...|+++|+++++.+.+... ...++.++++++|+ +|+++.. .+.|++++ ++ ....+..
T Consensus 108 -----~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~-~g----~~~~~~~ 176 (326)
T 2ghs_A 108 -----DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA-KG----KVTKLFA 176 (326)
T ss_dssp -----TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE-TT----EEEEEEE
T ss_pred -----CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe-CC----cEEEeeC
Confidence 33599999988887765432 13478999999998 8887653 46899998 42 2222222
Q ss_pred CCCCCCeeEECCCCC-EEEEEecCCccceeeeeeccc---cc-c-----EEeeccchhhhhcccccCCCC--------ce
Q 046018 195 LPGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLNSW---LG-K-----TLLKLPLSFRQLHSLLVGGKP--------HA 256 (310)
Q Consensus 195 ~~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~~---~g-~-----~~~~~~~~~~~~~~~~~~~~~--------~~ 256 (310)
....|.+++++++|+ ||+++...+. |..++. .| . .+..++.....+.++.+...+ ..
T Consensus 177 ~~~~~~~i~~s~dg~~lyv~~~~~~~-----I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~ 251 (326)
T 2ghs_A 177 DISIPNSICFSPDGTTGYFVDTKVNR-----LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEG 251 (326)
T ss_dssp EESSEEEEEECTTSCEEEEEETTTCE-----EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTT
T ss_pred CCcccCCeEEcCCCCEEEEEECCCCE-----EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCC
Confidence 123578999999995 8888765554 343332 34 2 122221111223333333222 23
Q ss_pred EEEEECCCCCEEEEEEcCCCCeecceeEEEEe---CCEEEEecCCC
Q 046018 257 TAIKLSEKGEVLEVLEDCEGKTLSFISEVEEK---DGQLWMGSVLM 299 (310)
Q Consensus 257 ~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~---~g~l~vgs~~~ 299 (310)
.+.+++++++.+..+..+. ..++.++.. .+.||+++...
T Consensus 252 ~v~~~d~~g~~~~~i~~~~----~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 252 AVDRYDTDGNHIARYEVPG----KQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEECTTCCEEEEEECSC----SBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEEEECCCCCEEEEEECCC----CCcEEEEEecCCCCEEEEEecCC
Confidence 5667788887777665432 235666543 36899998755
No 75
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.44 E-value=3.1e-11 Score=106.15 Aligned_cols=160 Identities=15% Similarity=0.153 Sum_probs=106.8
Q ss_pred cccceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeec-CCccccCCcceEEeCC---CCEEEEEeCC-Cchhh
Q 046018 44 HICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEA-AGQPLRFTNDLDIDEH---KGVIYFTDSS-TSFQR 118 (310)
Q Consensus 44 ~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~-~~~~~~~~~~i~~d~~---g~~l~v~~~~-~~~~~ 118 (310)
.....|.+|++++ +|+|||++..+.|.+++.+ ++ +.+.... .......|.+|+++|+ +.+||++... ..
T Consensus 26 ~~l~~P~~ia~~p-dG~l~V~e~~g~I~~~d~~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~--- 99 (354)
T 3a9g_A 26 SDLEVPWSIAPLG-GGRYLVTERPGRLVLISPS-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAE--- 99 (354)
T ss_dssp CSCSCEEEEEEEE-TTEEEEEETTTEEEEECSS-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECG---
T ss_pred CCCCCCeEEEEcC-CCeEEEEeCCCEEEEEeCC-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCC---
Confidence 3457899999999 8999999988779999865 44 4443321 1112346899999997 3349999741 00
Q ss_pred hhhhhhhhcCCCCceEEEEeCCCC-----eEEEEec-----CCcccceEEEecCCCeEEEEec-------------CCce
Q 046018 119 RQFMSSILSGDKTGRLLKYEKTTK-----EVTILLQ-----GLAFANGVALSRDRTFILIAET-------------SNCR 175 (310)
Q Consensus 119 ~~~~~~~~~~~~~g~v~~~d~~~~-----~~~~~~~-----~~~~~~gi~~~~d~~~lyv~~~-------------~~~~ 175 (310)
......+|++++.+++ ..+++.. ....+++|+++|||+ ||++.. ..++
T Consensus 100 --------~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~ 170 (354)
T 3a9g_A 100 --------GGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGK 170 (354)
T ss_dssp --------GGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSE
T ss_pred --------CCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeE
Confidence 0001267999987654 1232221 233578999999997 999852 2368
Q ss_pred EEEEEccCCCCC-----cceeeeeCCCCCCeeEECC-CCCEEEEEecCC
Q 046018 176 ILRFWLHGPNSG-----KQDVFAELPGFPDNVRSNS-NGEFWVALHAKK 218 (310)
Q Consensus 176 i~~~~~~~~~~~-----~~~~~~~~~~~p~~i~~d~-~G~l~va~~~~~ 218 (310)
|+++++++.... ..++++.--..|.++++|+ +|+||++++...
T Consensus 171 I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~ 219 (354)
T 3a9g_A 171 ILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPV 219 (354)
T ss_dssp EEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSS
T ss_pred EEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCC
Confidence 999998863110 1234443235689999999 899999998765
No 76
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.44 E-value=2e-10 Score=100.15 Aligned_cols=155 Identities=14% Similarity=0.164 Sum_probs=101.7
Q ss_pred cceeceEEEeCCCCc-EEEEECCCc-eEEEeCC-CCeEEEEEeecC-Cc------cccCCcceEEeCCCCEEEEEeCCCc
Q 046018 46 CGRPLGIRFDKKTGD-LYIADAYLG-FQVVGPE-GGLATQLVTEAA-GQ------PLRFTNDLDIDEHKGVIYFTDSSTS 115 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~-l~v~~~~~g-i~~~d~~-~~~~~~~~~~~~-~~------~~~~~~~i~~d~~g~~l~v~~~~~~ 115 (310)
...|.++++++ +|+ ||++....+ |..++.+ ++..+.+..... +. ....++.++++|+|+ +|+++..
T Consensus 85 ~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~-- 160 (347)
T 3hfq_A 85 GTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG-- 160 (347)
T ss_dssp SCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT--
T ss_pred CCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC--
Confidence 45788999999 665 888875544 6666653 344443322211 10 122467899999999 9999854
Q ss_pred hhhhhhhhhhhcCCCCceEEEEeCC-CCeEEEEe----cCCcccceEEEecCCCeEEEEecCCceEEEEEccC--CCCCc
Q 046018 116 FQRRQFMSSILSGDKTGRLLKYEKT-TKEVTILL----QGLAFANGVALSRDRTFILIAETSNCRILRFWLHG--PNSGK 188 (310)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~v~~~d~~-~~~~~~~~----~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~--~~~~~ 188 (310)
.+.|..|+.+ +++..... .....|.+++++|||++||+++...+.|.+|+.+. +....
T Consensus 161 ---------------~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 161 ---------------SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp ---------------TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred ---------------CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 5678888876 56554322 23346889999999999999988889999998874 21111
Q ss_pred ceeeeeCC------CCCCeeEECCCCC-EEEEEecCCc
Q 046018 189 QDVFAELP------GFPDNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 189 ~~~~~~~~------~~p~~i~~d~~G~-l~va~~~~~~ 219 (310)
...+...+ ..|.+++++++|+ ||++....+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~ 263 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT 263 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE
T ss_pred eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE
Confidence 11222222 2367799999997 7787765554
No 77
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.43 E-value=2.9e-11 Score=106.20 Aligned_cols=153 Identities=13% Similarity=0.117 Sum_probs=101.3
Q ss_pred ceeceEEEeCCCCc-EEEEECCC-ceEEE--eCCCC----e-EEEE---EeecCCccccCCcceEEeCCCCEEEEEeCCC
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYL-GFQVV--GPEGG----L-ATQL---VTEAAGQPLRFTNDLDIDEHKGVIYFTDSST 114 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~-gi~~~--d~~~~----~-~~~~---~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~ 114 (310)
.+++++++++ +|+ ||+++... .|..+ +..++ + +... ... .......|++++++|+|+++|+++..
T Consensus 155 ~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~spdg~~l~v~~~~- 231 (361)
T 3scy_A 155 PHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF-KVAPGSGPRHLIFNSDGKFAYLINEI- 231 (361)
T ss_dssp CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETT-
T ss_pred CcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce-ecCCCCCCeEEEEcCCCCEEEEEcCC-
Confidence 4568899999 665 89988764 35554 54443 2 3211 011 11223468899999999988888743
Q ss_pred chhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEec------CCcccceEEEecCCCeEEEEecC-CceEEEEEccCCCCC
Q 046018 115 SFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQ------GLAFANGVALSRDRTFILIAETS-NCRILRFWLHGPNSG 187 (310)
Q Consensus 115 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~------~~~~~~gi~~~~d~~~lyv~~~~-~~~i~~~~~~~~~~~ 187 (310)
.+.|..|+.++++.+.+.. ....|.+++++|||++||+++.. .+.|.+|+.+.. .+
T Consensus 232 ----------------~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~-~g 294 (361)
T 3scy_A 232 ----------------GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET-NG 294 (361)
T ss_dssp ----------------TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT-TC
T ss_pred ----------------CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC-CC
Confidence 6678888887776644321 12346799999999999999887 789999988621 11
Q ss_pred cceeeee--CCCCCCeeEECCCCC-EEEEEecCCc
Q 046018 188 KQDVFAE--LPGFPDNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 188 ~~~~~~~--~~~~p~~i~~d~~G~-l~va~~~~~~ 219 (310)
....... ....|.+++++++|+ ||++....+.
T Consensus 295 ~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~ 329 (361)
T 3scy_A 295 TLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNV 329 (361)
T ss_dssp CEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTE
T ss_pred cEEEeeEecCCCCCceEEECCCCCEEEEEECCCCC
Confidence 2222222 234689999999997 7777655443
No 78
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.42 E-value=5.5e-11 Score=102.80 Aligned_cols=167 Identities=10% Similarity=0.063 Sum_probs=107.0
Q ss_pred ccccccccCCCC-Cccccccceece-EEEeCCCCc-EEEEECCC----ceEEEeCCCCeEEEEEeecCCccccCCcceEE
Q 046018 28 TSQRKECVRPFA-PDIEHICGRPLG-IRFDKKTGD-LYIADAYL----GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDI 100 (310)
Q Consensus 28 ~~~~~~~~~~~~-~~~~~~~~~p~g-l~~d~~~g~-l~v~~~~~----gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~ 100 (310)
.+..+|..+... .........|.. +++++ +|+ || +.... .|..+|.++++....... ...|+++++
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~ 135 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEGQSSMADVDITP-DDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPI-----PYDAVGIAI 135 (331)
T ss_dssp EEEEEECSSSSCEEEEEEECSSCCCCEEECT-TSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEEC-----CTTEEEEEE
T ss_pred eEEEEECCCCceeEEecccCCCCccceEECC-CCCEEE-EecCCCCcccEEEEECCCCCeEEEEEC-----CCCccceEE
Confidence 445555544332 222223355677 99999 665 56 44443 589999998876543322 235789999
Q ss_pred eCCCCEEEEEeCCCchhhhhhhhhhhcCCCCce-EEEEeCCC-CeE----EEEecCCcccceEEEecCCCeEEEEecCCc
Q 046018 101 DEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGR-LLKYEKTT-KEV----TILLQGLAFANGVALSRDRTFILIAETSNC 174 (310)
Q Consensus 101 d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~-v~~~d~~~-~~~----~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~ 174 (310)
+|+|+++|+++.. .+. +..|+.+. +.. .........|.+++++||+++||++....+
T Consensus 136 spdg~~l~~~~~~-----------------~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 198 (331)
T 3u4y_A 136 SPNGNGLILIDRS-----------------SANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGN 198 (331)
T ss_dssp CTTSSCEEEEEET-----------------TTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTT
T ss_pred CCCCCEEEEEecC-----------------CCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCC
Confidence 9999878888743 344 55554332 222 122234456899999999999999988889
Q ss_pred eEEEEEccCCCCCc-ceeeeeCCCCCCeeEECCCCC-EEEEEecCCc
Q 046018 175 RILRFWLHGPNSGK-QDVFAELPGFPDNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 175 ~i~~~~~~~~~~~~-~~~~~~~~~~p~~i~~d~~G~-l~va~~~~~~ 219 (310)
.|.+|++..+.... ...+ .....|.+++++++|+ ||++....+.
T Consensus 199 ~v~v~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 199 SIGILETQNPENITLLNAV-GTNNLPGTIVVSRDGSTVYVLTESTVD 244 (331)
T ss_dssp EEEEEECSSTTSCEEEEEE-ECSSCCCCEEECTTSSEEEEECSSEEE
T ss_pred eEEEEECCCCcccceeeec-cCCCCCceEEECCCCCEEEEEEcCCCE
Confidence 99999987542210 1112 2345689999999998 7777654443
No 79
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.42 E-value=3.5e-10 Score=101.44 Aligned_cols=163 Identities=15% Similarity=0.136 Sum_probs=113.6
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..+++++ ++++|++.... .|..+|.++++....... ....+..++++++++++|++...
T Consensus 170 ~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~------------ 232 (433)
T 3bws_A 170 GFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDL----TGKWSKILLYDPIRDLVYCSNWI------------ 232 (433)
T ss_dssp CEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEEC----SSSSEEEEEEETTTTEEEEEETT------------
T ss_pred CceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcC----CCCCeeEEEEcCCCCEEEEEecC------------
Confidence 4566899988 88999888764 488899988765433221 12367899999999977777643
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEec-------CCceEEEEEccCCCCCcceeeeeCCCC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAET-------SNCRILRFWLHGPNSGKQDVFAELPGF 198 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~~ 198 (310)
++.|..||..+++..........+.+++++|+++.|+++.. .++.|++||+.+++. ......+..
T Consensus 233 -----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~---~~~~~~~~~ 304 (433)
T 3bws_A 233 -----SEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL---IDTIGPPGN 304 (433)
T ss_dssp -----TTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE---EEEEEEEEC
T ss_pred -----CCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE---EeeccCCCC
Confidence 67899999988877655555556899999999998888764 357899999874321 111112235
Q ss_pred CCeeEECCCCC-EEEEEecCCccceeeeeecc-ccccEEeecc
Q 046018 199 PDNVRSNSNGE-FWVALHAKKGLFGKLILLNS-WLGKTLLKLP 239 (310)
Q Consensus 199 p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~ 239 (310)
+..++++++|+ +|++....+. +..++ ..++.+..++
T Consensus 305 ~~~~~~~~~g~~l~~~~~~~~~-----v~v~d~~~~~~~~~~~ 342 (433)
T 3bws_A 305 KRHIVSGNTENKIYVSDMCCSK-----IEVYDLKEKKVQKSIP 342 (433)
T ss_dssp EEEEEECSSTTEEEEEETTTTE-----EEEEETTTTEEEEEEE
T ss_pred cceEEECCCCCEEEEEecCCCE-----EEEEECCCCcEEEEec
Confidence 78899999995 7777666654 44443 3455555543
No 80
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.41 E-value=1.4e-10 Score=98.35 Aligned_cols=219 Identities=14% Similarity=0.111 Sum_probs=139.5
Q ss_pred CCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEE
Q 046018 58 TGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLK 136 (310)
Q Consensus 58 ~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~ 136 (310)
.++++++.... .|+.+|+++++..--... . ....+++++++|+|+ ++++. .+.|+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~--~-~~~~~~~~~~~pdG~-ilvs~-------------------~~~V~~ 60 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL--E-KGWECNSVAATKAGE-ILFSY-------------------SKGAKM 60 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC--C-TTCCCCEEEECTTSC-EEEEC-------------------BSEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC--C-ccCCCcCeEECCCCC-EEEeC-------------------CCCEEE
Confidence 46777776664 589999988875322221 1 113588999999999 88854 567999
Q ss_pred EeCCCCeEEEEecCC--cccceEEEecCCCeEEEEecC-CceEEEEEccCCCCCcceeeeeCC---CCCCeeEECCCCCE
Q 046018 137 YEKTTKEVTILLQGL--AFANGVALSRDRTFILIAETS-NCRILRFWLHGPNSGKQDVFAELP---GFPDNVRSNSNGEF 210 (310)
Q Consensus 137 ~d~~~~~~~~~~~~~--~~~~gi~~~~d~~~lyv~~~~-~~~i~~~~~~~~~~~~~~~~~~~~---~~p~~i~~d~~G~l 210 (310)
+|++ ++...-.... ...+...+.+||+ +++++.. +++|+.++++++.......-.... ..|..+.++++|++
T Consensus 61 ~d~~-G~~~W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~ 138 (276)
T 3no2_A 61 ITRD-GRELWNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY 138 (276)
T ss_dssp ECTT-SCEEEEEECCTTCEEEEEEECTTSC-EEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCE
T ss_pred ECCC-CCEEEEEcCCCCccccccEECCCCC-EEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCE
Confidence 9994 5544322221 2456778899998 6666666 789999988764221111111111 24677889999999
Q ss_pred EEEEecCCccceeeeeeccccccEEeeccchhhhhcc--------cccCCCCceEEEEECCC-CCEEEEEEcC--CCCee
Q 046018 211 WVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHS--------LLVGGKPHATAIKLSEK-GEVLEVLEDC--EGKTL 279 (310)
Q Consensus 211 ~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~d~~-g~~~~~~~~~--~g~~~ 279 (310)
+++....+. +..+++.|+.+..+..+. .+.. ..+.......++.+|++ |+++..+... .+..+
T Consensus 139 lv~~~~~~~-----v~~~d~~G~~~w~~~~~~-~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l 212 (276)
T 3no2_A 139 LVPLFATSE-----VREIAPNGQLLNSVKLSG-TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQL 212 (276)
T ss_dssp EEEETTTTE-----EEEECTTSCEEEEEECSS-CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCC
T ss_pred EEEecCCCE-----EEEECCCCCEEEEEECCC-CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccc
Confidence 999887665 566666799887765431 1111 12222333467889988 9998888642 23334
Q ss_pred cceeEEE-EeCCEEEEecCC----------CCeEEEecc
Q 046018 280 SFISEVE-EKDGQLWMGSVL----------MPFIGIYNR 307 (310)
Q Consensus 280 ~~~~~~~-~~~g~l~vgs~~----------~~~i~~~~~ 307 (310)
..++.+. ..+|.+|++++. ..++..++.
T Consensus 213 ~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~ 251 (276)
T 3no2_A 213 FFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS 251 (276)
T ss_dssp SEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT
T ss_pred cccccceEcCCCCEEEEeccCccccccccCCceEEEECC
Confidence 5566554 458899999862 446777653
No 81
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.41 E-value=5.5e-12 Score=107.93 Aligned_cols=188 Identities=9% Similarity=-0.032 Sum_probs=118.1
Q ss_pred EEEEeCCCCC-eEEEE-EeccccccccCCCCCcccc--------ccceeceEEE---eCCCCcEEEEEC-----------
Q 046018 11 ILKWQGDELG-WTEFA-VTTSQRKECVRPFAPDIEH--------ICGRPLGIRF---DKKTGDLYIADA----------- 66 (310)
Q Consensus 11 i~~~~~~~~~-W~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~p~gl~~---d~~~g~l~v~~~----------- 66 (310)
-.+|+...+. |++.. ..++..+++.+.....+.. ...++.||.+ |+ +|+||++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCTTSCC
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccccccccccc
Confidence 4567775554 77663 4666667765321111111 1136789999 78 699999533
Q ss_pred ---CCceEEEeCC---CCeEEEEEeec--CCc-------cccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCC
Q 046018 67 ---YLGFQVVGPE---GGLATQLVTEA--AGQ-------PLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKT 131 (310)
Q Consensus 67 ---~~gi~~~d~~---~~~~~~~~~~~--~~~-------~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~ 131 (310)
...|.++|++ +++....+... ... ....+++|++|++|+ +||+++. .
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~-----------------~ 157 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFAL-----------------G 157 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEE-----------------S
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCC-----------------C
Confidence 1348999988 56543333321 110 223589999999999 9999853 4
Q ss_pred -ceEEEEeCCCCeEEEEec------CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceee--ee--CCCCCC
Q 046018 132 -GRLLKYEKTTKEVTILLQ------GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVF--AE--LPGFPD 200 (310)
Q Consensus 132 -g~v~~~d~~~~~~~~~~~------~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~--~~--~~~~p~ 200 (310)
+.|+++++++.....+.. ....++||++.||++.|+++++ .++|++||+..........- .. ....|+
T Consensus 158 ~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~d 236 (334)
T 2p9w_A 158 MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTE 236 (334)
T ss_dssp SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEE
T ss_pred CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcc
Confidence 779999998654554321 1234789999999998999988 89999999873211001111 00 123578
Q ss_pred ee-EECCCCCE-EEEEecCC
Q 046018 201 NV-RSNSNGEF-WVALHAKK 218 (310)
Q Consensus 201 ~i-~~d~~G~l-~va~~~~~ 218 (310)
+| ....+|++ +|+...+.
T Consensus 237 gilp~~~~G~vllV~~~~~~ 256 (334)
T 2p9w_A 237 KIVTVPVGNESVLVGARAPY 256 (334)
T ss_dssp EEEEEEETTEEEEEEEETTE
T ss_pred cccccccCCEEEEEEcCCCC
Confidence 85 66678876 66665443
No 82
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.41 E-value=3.5e-11 Score=109.29 Aligned_cols=200 Identities=12% Similarity=0.094 Sum_probs=128.8
Q ss_pred EEEEEeCC-CCC-eEEEE-EeccccccccCCCCCcccc----ccceeceEEE-------eCCCCc-EEEEECCC------
Q 046018 10 RILKWQGD-ELG-WTEFA-VTTSQRKECVRPFAPDIEH----ICGRPLGIRF-------DKKTGD-LYIADAYL------ 68 (310)
Q Consensus 10 ~i~~~~~~-~~~-W~~~~-~~~~~~~~~~~~~~~~~~~----~~~~p~gl~~-------d~~~g~-l~v~~~~~------ 68 (310)
....+++. .+. |+... ...+.++|.++.+...+.. ...+|.+|++ ++ +|+ ||+++...
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTTGGGE
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCCcccC
Confidence 34556653 222 54322 2456666665533222221 1247999999 98 665 99999874
Q ss_pred -ceEEEeCCC-CeEE-----EEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCC-
Q 046018 69 -GFQVVGPEG-GLAT-----QLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKT- 140 (310)
Q Consensus 69 -gi~~~d~~~-~~~~-----~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~- 140 (310)
.|+.++.+. +.+. .... ....|++++++|++++||+++.. .+.|+++|++
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~-----~~~~p~giavdp~~g~LYvtd~~-----------------~g~V~r~d~~~ 278 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIA-----AYKQCNGATIHPINGELYFNSYE-----------------KGQVFRLDLVD 278 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEE-----EESCCCCEEECTTTCCEEEEETT-----------------TTEEEEECHHH
T ss_pred ceEEEEecCCCCceeecccceeec-----cCCCceEEEEcCCCCeEEEEECC-----------------CCEEEEEeccc
Confidence 277886554 2321 1111 23479999999954449999964 7789999987
Q ss_pred ------CCeE------------EEEe--cCCcccceEEEecCCCeEEEEecCCceEEEEEccCCC--CCcceeeeeC---
Q 046018 141 ------TKEV------------TILL--QGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPN--SGKQDVFAEL--- 195 (310)
Q Consensus 141 ------~~~~------------~~~~--~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~--~~~~~~~~~~--- 195 (310)
++.. +.+. .....|.+|+++|+++.||++++.+++|++++.++.. ......++..
T Consensus 279 ~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~ 358 (496)
T 3kya_A 279 YFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ 358 (496)
T ss_dssp HHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTB
T ss_pred ccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCC
Confidence 5543 1222 2234588999999999999999999999999887531 1111222211
Q ss_pred ------------CCCCC-eeEEC-------CCCCEEEEEecCCccceeeeeeccccccEEee
Q 046018 196 ------------PGFPD-NVRSN-------SNGEFWVALHAKKGLFGKLILLNSWLGKTLLK 237 (310)
Q Consensus 196 ------------~~~p~-~i~~d-------~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~ 237 (310)
-..|. ++++| ++|+||||+..+++ |.++.++|.....
T Consensus 359 ~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~r-----Ir~i~~~G~v~Ti 415 (496)
T 3kya_A 359 SGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFC-----VRKVTPEGIVSTY 415 (496)
T ss_dssp CCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTE-----EEEECTTCBEEEE
T ss_pred CcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCE-----EEEEeCCCCEEEE
Confidence 13577 78887 78999999998886 6667778865433
No 83
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.39 E-value=1.6e-10 Score=100.31 Aligned_cols=163 Identities=15% Similarity=0.101 Sum_probs=109.6
Q ss_pred ceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcC
Q 046018 50 LGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSG 128 (310)
Q Consensus 50 ~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~ 128 (310)
.|+++.+ ++++|++.... .|.++|..+++........ ....+..++++|+|+++|++...
T Consensus 3 ~g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~~~v~~~~--------------- 63 (349)
T 1jmx_B 3 TGPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMP---DKFGPGTAMMAPDNRTAYVLNNH--------------- 63 (349)
T ss_dssp -CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECS---SCCSSCEEEECTTSSEEEEEETT---------------
T ss_pred ccccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEecC---CCCCCceeEECCCCCEEEEEeCC---------------
Confidence 4677777 78899887764 4999999988765433321 11258899999999878888743
Q ss_pred CCCceEEEEeCCCCeEEEEecC-------CcccceEEEecCCCeEEEEecC-----------CceEEEEEccCCCCCcce
Q 046018 129 DKTGRLLKYEKTTKEVTILLQG-------LAFANGVALSRDRTFILIAETS-----------NCRILRFWLHGPNSGKQD 190 (310)
Q Consensus 129 ~~~g~v~~~d~~~~~~~~~~~~-------~~~~~gi~~~~d~~~lyv~~~~-----------~~~i~~~~~~~~~~~~~~ 190 (310)
.+.|+.||+++++....... ...+.+++++||++.||++... .+.|++||+.++......
T Consensus 64 --~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~ 141 (349)
T 1jmx_B 64 --YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV 141 (349)
T ss_dssp --TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS
T ss_pred --CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccccee
Confidence 67899999988876543322 2237899999999999998744 579999998753221111
Q ss_pred eeeeCCCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEeeccc
Q 046018 191 VFAELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPL 240 (310)
Q Consensus 191 ~~~~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~ 240 (310)
.....+..+.+++++++|++|++. ..+ ...+...++....++.
T Consensus 142 ~~~~~~~~~~~~~~s~dg~l~~~~---~~i----~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 142 RTFPMPRQVYLMRAADDGSLYVAG---PDI----YKMDVKTGKYTVALPL 184 (349)
T ss_dssp EEEECCSSCCCEEECTTSCEEEES---SSE----EEECTTTCCEEEEECS
T ss_pred eeccCCCcccceeECCCCcEEEcc---CcE----EEEeCCCCceeccccc
Confidence 122234457788899999988742 221 2334456666665543
No 84
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.39 E-value=9.2e-12 Score=107.71 Aligned_cols=239 Identities=11% Similarity=0.077 Sum_probs=140.0
Q ss_pred eEEEEEeccccccccCCCCCcc-ccccceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceE
Q 046018 21 WTEFAVTTSQRKECVRPFAPDI-EHICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLD 99 (310)
Q Consensus 21 W~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~ 99 (310)
|+.....++.++|..+ ++... .........++.++ +|.||+++.. |+++|+++..+..+ . ... ......+
T Consensus 34 ~v~t~~~~l~~~d~~g-~~~~~~~~~~~~~~~~~~~~-~g~l~v~t~~--l~~~d~~g~~~~~~-~--~~~--~~~~~~~ 104 (330)
T 3hxj_A 34 YLGSSNKNLYAINTDG-SVKWFFKSGEIIECRPSIGK-DGTIYFGSDK--VYAINPDGTEKWRF-D--TKK--AIVSDFT 104 (330)
T ss_dssp ECSSTTTTTEEECTTS-CEEESSCGGGEEEECCEETT-TTEECCSSCE--EEEECCCGGGGGGS-C--C-------CCEE
T ss_pred EEEcCCCEEEEECCCC-cEEEEEecCCCcccceEEec-CCcEEEecCc--EEEECCCCcEEEEE-E--CCC--CcccCce
Confidence 8866667788888333 21111 11112345788887 8999998665 99999854332111 1 011 1123344
Q ss_pred EeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEE-EecCCcccceEEEecCCCeEEEEecCCceEEE
Q 046018 100 IDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTI-LLQGLAFANGVALSRDRTFILIAETSNCRILR 178 (310)
Q Consensus 100 ~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~-~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~ 178 (310)
+. +++ +|+++. .+.|+++|++ ++... ..........+++++++. +|++ +..+.|++
T Consensus 105 ~~-~~~-l~v~t~------------------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vg-t~~~~l~~ 161 (330)
T 3hxj_A 105 IF-EDI-LYVTSM------------------DGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVG-SNDNYLYA 161 (330)
T ss_dssp EE-TTE-EEEECT------------------TSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEE-CTTSEEEE
T ss_pred EE-CCE-EEEEec------------------CCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEE-cCCCEEEE
Confidence 44 776 999872 5679999998 55433 222223345677887777 8887 45689999
Q ss_pred EEccCCCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCC-----
Q 046018 179 FWLHGPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGK----- 253 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~----- 253 (310)
+++++. . ...+.........+++|++|+||+++ ++ +..++++++.+.....+.....++.....
T Consensus 162 ~d~~g~-~--~~~~~~~~~~~~~~~~d~~g~l~v~t--~~------l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~l~v 230 (330)
T 3hxj_A 162 INPDGT-E--KWRFKTNDAITSAASIGKDGTIYFGS--DK------VYAINPDGTEKWNFYAGYWTVTRPAISEDGTIYV 230 (330)
T ss_dssp ECTTSC-E--EEEEECSSCCCSCCEECTTCCEEEES--SS------EEEECTTSCEEEEECCSSCCCSCCEECTTSCEEE
T ss_pred ECCCCC-E--eEEEecCCCceeeeEEcCCCEEEEEe--CE------EEEECCCCcEEEEEccCCcceeceEECCCCeEEE
Confidence 987622 1 11111112234668899999999998 33 56666777776555433222222222211
Q ss_pred --CceEEEEECCCCCEEEEEEcCCCCeecceeEEE-EeCCEEEEecCCCCeEEEecc
Q 046018 254 --PHATAIKLSEKGEVLEVLEDCEGKTLSFISEVE-EKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 254 --~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~-~~~g~l~vgs~~~~~i~~~~~ 307 (310)
....+.+++++|+.+..+....+. .+.++ ..+++||+++. ..+|+.++.
T Consensus 231 ~t~~~gl~~~~~~g~~~~~~~~~~~~----~~~~~~~~~g~l~v~t~-~ggl~~~d~ 282 (330)
T 3hxj_A 231 TSLDGHLYAINPDGTEKWRFKTGKRI----ESSPVIGNTDTIYFGSY-DGHLYAINP 282 (330)
T ss_dssp EETTTEEEEECTTSCEEEEEECSSCC----CSCCEECTTSCEEEECT-TCEEEEECT
T ss_pred EcCCCeEEEECCCCCEeEEeeCCCCc----cccceEcCCCeEEEecC-CCCEEEECC
Confidence 123566778888887766543321 22233 34889999996 568998874
No 85
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.37 E-value=3.1e-10 Score=100.41 Aligned_cols=184 Identities=13% Similarity=0.109 Sum_probs=123.5
Q ss_pred eccccccccCCCCCccccccceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCC
Q 046018 27 TTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKG 105 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~ 105 (310)
..+..+|..+.+..........+.+++++++...||++... ..|..+|.++++....... ...+.+++++++|+
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~ 128 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-----GKSPLGLALSPDGK 128 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-----SSSEEEEEECTTSS
T ss_pred CeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-----CCCcceEEECCCCC
Confidence 44555565442222222233477899999944458888766 4599999998876544332 12578999999999
Q ss_pred EEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCC
Q 046018 106 VIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPN 185 (310)
Q Consensus 106 ~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~ 185 (310)
++|++... .+.|+.||..+++..........+..++++||++.||++...++.|++||+....
T Consensus 129 ~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 129 KLYVTNNG-----------------DKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (391)
T ss_dssp EEEEEETT-----------------TTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEeCC-----------------CCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe
Confidence 78787643 6789999998887766555566789999999999898888888999999987431
Q ss_pred CCcceeeeeCCCCCCeeEECCCCC-EEEEEe--cCCccceeeeeecc-ccccEEeeccc
Q 046018 186 SGKQDVFAELPGFPDNVRSNSNGE-FWVALH--AKKGLFGKLILLNS-WLGKTLLKLPL 240 (310)
Q Consensus 186 ~~~~~~~~~~~~~p~~i~~d~~G~-l~va~~--~~~~~~~~~i~~~~-~~g~~~~~~~~ 240 (310)
..........+..++++++|+ ||++.. ..+. +..++ ..++.+..++.
T Consensus 192 ---~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-----v~~~d~~~~~~~~~~~~ 242 (391)
T 1l0q_A 192 ---VIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNT-----VSMIDTGTNKITARIPV 242 (391)
T ss_dssp ---EEEEEECSSEEEEEEECTTSSEEEEEEECSSCCE-----EEEEETTTTEEEEEEEC
T ss_pred ---EEEEEecCCCccceEECCCCCEEEEEecCcCCCc-----EEEEECCCCeEEEEEec
Confidence 111222334578899999996 666654 3333 44443 45555555443
No 86
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.37 E-value=7.5e-10 Score=102.95 Aligned_cols=166 Identities=7% Similarity=-0.016 Sum_probs=116.2
Q ss_pred eeceEEEeCCCCcEEEEECCCceEEEeC--CCCeEEEEEeecCCccccCCcceEEeC----CCCEEEEEeCCCchhhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQVVGP--EGGLATQLVTEAAGQPLRFTNDLDIDE----HKGVIYFTDSSTSFQRRQF 121 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~~~d~--~~~~~~~~~~~~~~~~~~~~~~i~~d~----~g~~l~v~~~~~~~~~~~~ 121 (310)
.+++++++++...||+++..+.|..+|. .+++....+. . ...|.+++++| +|+++|+++..
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~---g~~p~~va~sp~~~~dg~~l~v~~~~-------- 246 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK--I---GIEARSVESSKFKGYEDRYTIAGAYW-------- 246 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE--C---CSEEEEEEECCSTTCTTTEEEEEEEE--------
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe--c---CCCcceEEeCCCcCCCCCEEEEEEcc--------
Confidence 3789999995557899888766999999 6665432222 1 23689999999 99989988732
Q ss_pred hhhhhcCCCCceEEEEeCCCCeEEEEecC------------CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcc
Q 046018 122 MSSILSGDKTGRLLKYEKTTKEVTILLQG------------LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQ 189 (310)
Q Consensus 122 ~~~~~~~~~~g~v~~~d~~~~~~~~~~~~------------~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~ 189 (310)
.+.|..||.++++....... ...+.+|+++++++.+|++...++.|+.+|.........
T Consensus 247 ---------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~ 317 (543)
T 1nir_A 247 ---------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTV 317 (543)
T ss_dssp ---------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEE
T ss_pred ---------CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCccee
Confidence 67799999888765443221 124568999999998999988999999999875322111
Q ss_pred eeeeeCCCCCCeeEECCCCC-EEEEEecCCccceeeeeeccccccEEeeccc
Q 046018 190 DVFAELPGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLNSWLGKTLLKLPL 240 (310)
Q Consensus 190 ~~~~~~~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~ 240 (310)
..+ .....|.+++++++|+ ++++....+.+ ...+..+++++..++.
T Consensus 318 ~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v----~v~D~~tg~l~~~i~~ 364 (543)
T 1nir_A 318 TSI-GAAPFLHDGGWDSSHRYFMTAANNSNKV----AVIDSKDRRLSALVDV 364 (543)
T ss_dssp EEE-ECCSSCCCEEECTTSCEEEEEEGGGTEE----EEEETTTTEEEEEEEC
T ss_pred EEe-ccCcCccCceECCCCCEEEEEecCCCeE----EEEECCCCeEEEeecc
Confidence 111 2345789999999998 66666655553 3445567777766543
No 87
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.35 E-value=1e-10 Score=102.89 Aligned_cols=167 Identities=14% Similarity=0.102 Sum_probs=105.8
Q ss_pred cceeceEEEeCC---CCcEEEEECC------CceEEEeCCCCeE---EEEEeecC--CccccCCcceEEeCCCCEEEEEe
Q 046018 46 CGRPLGIRFDKK---TGDLYIADAY------LGFQVVGPEGGLA---TQLVTEAA--GQPLRFTNDLDIDEHKGVIYFTD 111 (310)
Q Consensus 46 ~~~p~gl~~d~~---~g~l~v~~~~------~gi~~~d~~~~~~---~~~~~~~~--~~~~~~~~~i~~d~~g~~l~v~~ 111 (310)
...|.||+++++ ++.|||+... ..|.+++.+++.+ +.+..... ....+.+++|+++|+|. ||+++
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~ 152 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTT 152 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEEC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEE
Confidence 468999999994 4899999874 4599998775532 23333222 23456789999999998 99997
Q ss_pred CCCchhhhhhhhhhhcCCCCceEEEEeCCC-------------CeEEEEecCCcccceEEEecCCCeEEEEecCCce---
Q 046018 112 SSTSFQRRQFMSSILSGDKTGRLLKYEKTT-------------KEVTILLQGLAFANGVALSRDRTFILIAETSNCR--- 175 (310)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~-------------~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~--- 175 (310)
....- . . ...-.....|+|+++++++ ...+++..++..|+|++++|+...||+++...+.
T Consensus 153 G~~~~-~-~--~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~ 228 (352)
T 2ism_A 153 GEVYE-R-E--LAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQG 228 (352)
T ss_dssp CCTTC-G-G--GGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC-----
T ss_pred CCCCC-C-c--cccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCC
Confidence 42100 0 0 0000112357899999975 2344556677889999999954459999987766
Q ss_pred -----EEEEEccCCCCCc------------ceeeeeC--CCCCCeeEECCCCCEEEEEecCCc
Q 046018 176 -----ILRFWLHGPNSGK------------QDVFAEL--PGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 176 -----i~~~~~~~~~~~~------------~~~~~~~--~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
|.++.. +...+. ....... ...|.++++ .+|++|+++..++.
T Consensus 229 ~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~ 289 (352)
T 2ism_A 229 YGHDEVNLIVP-GGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQA 289 (352)
T ss_dssp -CCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTE
T ss_pred CCCeEEEEecc-CCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCE
Confidence 555533 221110 0111111 135789998 57899999887664
No 88
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.35 E-value=1.9e-10 Score=101.32 Aligned_cols=153 Identities=16% Similarity=0.168 Sum_probs=93.9
Q ss_pred ceeceEEEeCCCCc-EEE--EE-------------CCCceEEEeCC-CCeEEEEEeecCCccccCCcceEEeCCCCEEEE
Q 046018 47 GRPLGIRFDKKTGD-LYI--AD-------------AYLGFQVVGPE-GGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYF 109 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v--~~-------------~~~gi~~~d~~-~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v 109 (310)
+.|..+++++ +|+ ||+ ++ ..+.+..++.+ .+++..............+++++++|+|+++|+
T Consensus 83 g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 83 GHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp SSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 3467789999 776 343 32 22224444443 243322222110011236889999999998888
Q ss_pred EeCCCchhhhhhhhhhhcCCCCceEEEEeCC-CCeEEEEe--c--C-CcccceEEEecCCCeEEEEecCCceEEEEEccC
Q 046018 110 TDSSTSFQRRQFMSSILSGDKTGRLLKYEKT-TKEVTILL--Q--G-LAFANGVALSRDRTFILIAETSNCRILRFWLHG 183 (310)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-~~~~~~~~--~--~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~ 183 (310)
++.. .+.|+.|+.+ +++.+.+. . . ...|.+++++|||++||+++..++.|.+|+.+.
T Consensus 162 ~~~~-----------------~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 224 (365)
T 1jof_A 162 ADLT-----------------ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp EETT-----------------TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EcCC-----------------CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeC
Confidence 8743 5678888887 67654322 1 1 456899999999999999987778998887653
Q ss_pred --CCCCc-ceeeeeCC----C---------CCCeeE-ECCCCC-EEEEEecC
Q 046018 184 --PNSGK-QDVFAELP----G---------FPDNVR-SNSNGE-FWVALHAK 217 (310)
Q Consensus 184 --~~~~~-~~~~~~~~----~---------~p~~i~-~d~~G~-l~va~~~~ 217 (310)
+.... ...+...+ + .|.+++ +++||+ ||+++...
T Consensus 225 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 225 ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred CCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 21110 11122222 1 367899 999996 67776544
No 89
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.35 E-value=8.5e-10 Score=96.00 Aligned_cols=159 Identities=13% Similarity=0.130 Sum_probs=107.5
Q ss_pred cccccceeceEEEeCCCCcEEEEEC-CCceEEEeCCCCeEEEEEeec--CCccccCCcceEEeCC----CCEEEEEeCCC
Q 046018 42 IEHICGRPLGIRFDKKTGDLYIADA-YLGFQVVGPEGGLATQLVTEA--AGQPLRFTNDLDIDEH----KGVIYFTDSST 114 (310)
Q Consensus 42 ~~~~~~~p~gl~~d~~~g~l~v~~~-~~gi~~~d~~~~~~~~~~~~~--~~~~~~~~~~i~~d~~----g~~l~v~~~~~ 114 (310)
+..-...|.+|++.+ +|+|||+.. .+.|++++.++++.+.+...+ .......+.+|+++|+ +. ||++.+..
T Consensus 27 va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~-lYv~yt~~ 104 (347)
T 3das_A 27 VATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHM-VYAYFTSA 104 (347)
T ss_dssp EECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCE-EEEEEECS
T ss_pred eecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCE-EEEEEecC
Confidence 344457899999999 899999998 455999988777655443321 1122346889999984 65 99975321
Q ss_pred chhhhhhhhhhhcCCCCceEEEEeCCCC--------eEEEEec-----CCcccceEEEecCCCeEEEEec----------
Q 046018 115 SFQRRQFMSSILSGDKTGRLLKYEKTTK--------EVTILLQ-----GLAFANGVALSRDRTFILIAET---------- 171 (310)
Q Consensus 115 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~--------~~~~~~~-----~~~~~~gi~~~~d~~~lyv~~~---------- 171 (310)
..++|.++..+.+ ..+++.. .....+.|++.|||. ||++.-
T Consensus 105 ---------------~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd 168 (347)
T 3das_A 105 ---------------SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQD 168 (347)
T ss_dssp ---------------SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTC
T ss_pred ---------------CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccC
Confidence 2567888876541 1233222 123456799999997 999842
Q ss_pred ---CCceEEEEEccCCCCC-----cceeeeeCCCCCCeeEECCCCCEEEEEecCC
Q 046018 172 ---SNCRILRFWLHGPNSG-----KQDVFAELPGFPDNVRSNSNGEFWVALHAKK 218 (310)
Q Consensus 172 ---~~~~i~~~~~~~~~~~-----~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~ 218 (310)
..++|+++++++.... ..++++.--..|.++++|++|+||++++...
T Consensus 169 ~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~ 223 (347)
T 3das_A 169 RKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQD 223 (347)
T ss_dssp TTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSS
T ss_pred CCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCC
Confidence 3589999998864110 1234443224689999999999999998654
No 90
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.34 E-value=8.6e-10 Score=91.46 Aligned_cols=160 Identities=11% Similarity=0.093 Sum_probs=104.3
Q ss_pred ceEEEeCCCCcEEEEECCC---ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 50 LGIRFDKKTGDLYIADAYL---GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 50 ~gl~~d~~~g~l~v~~~~~---gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
.||.++ ++.||+++... .|.++|++++++..-.... +..+..+|+++ +++||+.+..
T Consensus 46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~---~~~FgeGit~~--g~~ly~ltw~------------- 105 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG---KRYFGEGISDW--KDKIVGLTWK------------- 105 (262)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC---TTCCEEEEEEE--TTEEEEEESS-------------
T ss_pred ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecC---CccceeEEEEe--CCEEEEEEee-------------
Confidence 699997 46999998753 4999999999875443321 11233456665 4469999853
Q ss_pred cCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC--C-CCCCeeE
Q 046018 127 SGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL--P-GFPDNVR 203 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~-~~p~~i~ 203 (310)
.+.++.||+++.+...-..- .+.|..+++|++.||+++ ++++|+.+|+.+.+....-.+... + ..++.+.
T Consensus 106 ----~~~v~v~D~~t~~~~~ti~~--~~eG~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe 178 (262)
T 3nol_A 106 ----NGLGFVWNIRNLRQVRSFNY--DGEGWGLTHNDQYLIMSD-GTPVLRFLDPESLTPVRTITVTAHGEELPELNELE 178 (262)
T ss_dssp ----SSEEEEEETTTCCEEEEEEC--SSCCCCEEECSSCEEECC-SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEE
T ss_pred ----CCEEEEEECccCcEEEEEEC--CCCceEEecCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEeccCCccccccceeE
Confidence 78899999988765543222 236667778888899997 578999999875322111111111 1 2334566
Q ss_pred ECCCCCEEEEEecCCccceeeeeeccccccEEeeccch
Q 046018 204 SNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLS 241 (310)
Q Consensus 204 ~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~ 241 (310)
+. +|.||++.+..+.+ ..+++.+|+.+..+.++
T Consensus 179 ~~-~G~lyan~w~~~~I----~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 179 WV-DGEIFANVWQTNKI----VRIDPETGKVTGIIDLN 211 (262)
T ss_dssp EE-TTEEEEEETTSSEE----EEECTTTCBEEEEEECT
T ss_pred EE-CCEEEEEEccCCeE----EEEECCCCcEEEEEECC
Confidence 65 79999999877753 44455666666666543
No 91
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.32 E-value=2.7e-09 Score=93.54 Aligned_cols=152 Identities=14% Similarity=0.134 Sum_probs=97.7
Q ss_pred cceeceEEEeCCCCc-EEEEECC----Cce--EEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhh
Q 046018 46 CGRPLGIRFDKKTGD-LYIADAY----LGF--QVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQR 118 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~-l~v~~~~----~gi--~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~ 118 (310)
...|..+++++ +|+ ||++... ..| +.++.++++++.+..... ....|..+++ +|++||+++..
T Consensus 49 ~~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~--~~~~p~~~~~--dg~~l~~~~~~----- 118 (361)
T 3scy_A 49 VANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT--MGADPCYLTT--NGKNIVTANYS----- 118 (361)
T ss_dssp CSCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC--SSSCEEEEEE--CSSEEEEEETT-----
T ss_pred CCCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc--CCCCcEEEEE--CCCEEEEEECC-----
Confidence 46788999999 554 8888874 234 666777677765543321 1235777887 77778888743
Q ss_pred hhhhhhhhcCCCCceEEEEeCCC-CeEEE----EecC----------CcccceEEEecCCCeEEEEecCCceEEEEEccC
Q 046018 119 RQFMSSILSGDKTGRLLKYEKTT-KEVTI----LLQG----------LAFANGVALSRDRTFILIAETSNCRILRFWLHG 183 (310)
Q Consensus 119 ~~~~~~~~~~~~~g~v~~~d~~~-~~~~~----~~~~----------~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~ 183 (310)
.+.+..|+.+. +.... .... ...+++++++||+++||+++...+.|.+|+.+.
T Consensus 119 ------------~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~ 186 (361)
T 3scy_A 119 ------------GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINP 186 (361)
T ss_dssp ------------TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred ------------CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcC
Confidence 56788887643 22211 1111 122478999999999999988889999998874
Q ss_pred CC-------CCcc---eeee-eCCCCCCeeEECCCCC-EEEEEecCCc
Q 046018 184 PN-------SGKQ---DVFA-ELPGFPDNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 184 ~~-------~~~~---~~~~-~~~~~p~~i~~d~~G~-l~va~~~~~~ 219 (310)
.. .... .... .....|..++++++|+ +|++....+.
T Consensus 187 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 234 (361)
T 3scy_A 187 NANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT 234 (361)
T ss_dssp TCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE
T ss_pred CCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe
Confidence 32 1000 1111 1234688999999997 7777655554
No 92
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.31 E-value=2.8e-10 Score=94.38 Aligned_cols=159 Identities=12% Similarity=0.126 Sum_probs=106.1
Q ss_pred ceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcC
Q 046018 50 LGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSG 128 (310)
Q Consensus 50 ~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~ 128 (310)
.||.++. +.||+++...| |.++|++++++..-. .. . ..+..+++++. ++||+.+..
T Consensus 58 qGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~--~~FgeGit~~g--~~Ly~ltw~--------------- 114 (268)
T 3nok_A 58 QGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RL-G--NIFAEGLASDG--ERLYQLTWT--------------- 114 (268)
T ss_dssp EEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-EC-T--TCCEEEEEECS--SCEEEEESS---------------
T ss_pred ceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-C--CcceeEEEEeC--CEEEEEEcc---------------
Confidence 5999974 79999998854 889999998764333 21 1 11334566653 349999853
Q ss_pred CCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCC---CCCCeeEEC
Q 046018 129 DKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELP---GFPDNVRSN 205 (310)
Q Consensus 129 ~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~p~~i~~d 205 (310)
.+.++.||+++.+...-..- .+.|..+++|+++||+++ ++++|+.+|+.+.+....-.+...+ ..++.+.+.
T Consensus 115 --~~~v~V~D~~Tl~~~~ti~~--~~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 115 --EGLLFTWSGMPPQRERTTRY--SGEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp --SCEEEEEETTTTEEEEEEEC--SSCCCCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred --CCEEEEEECCcCcEEEEEeC--CCceeEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe
Confidence 78899999998776543322 245666668889999997 6899999998753221111111111 133556665
Q ss_pred CCCCEEEEEecCCccceeeeeeccccccEEeeccch
Q 046018 206 SNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLS 241 (310)
Q Consensus 206 ~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~ 241 (310)
+|.||++.+....+ +.+++.+|+.+..+.+.
T Consensus 190 -dG~lyanvw~s~~I----~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 190 -NGVIYANIWHSSDV----LEIDPATGTVVGVIDAS 220 (268)
T ss_dssp -TTEEEEEETTCSEE----EEECTTTCBEEEEEECH
T ss_pred -CCEEEEEECCCCeE----EEEeCCCCcEEEEEECC
Confidence 78999998877764 55566777777777664
No 93
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.29 E-value=1.6e-09 Score=89.08 Aligned_cols=162 Identities=14% Similarity=0.107 Sum_probs=105.8
Q ss_pred eeceEEEeCCCCcEEEEECCC---ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAYL---GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~---gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
-..||.++. +.||+++... .|.++|++++++..-...+. ..+..+++++ +++||+.+..
T Consensus 22 ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~---~~fgeGi~~~--~~~ly~ltw~----------- 83 (243)
T 3mbr_X 22 FTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPP---PYFGAGIVAW--RDRLIQLTWR----------- 83 (243)
T ss_dssp CEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT---TCCEEEEEEE--TTEEEEEESS-----------
T ss_pred ccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC---CcceeEEEEe--CCEEEEEEee-----------
Confidence 345999986 7999998763 49999999998754433211 1133455655 4459999843
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC--C-CCCCe
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL--P-GFPDN 201 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~-~~p~~ 201 (310)
.+.++.||+++.+...-.+-. ..|..+++|+++||+++ ++++|+.+|+.+.+....-.+... + ..++.
T Consensus 84 ------~~~v~v~D~~tl~~~~ti~~~--~~Gwglt~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNe 154 (243)
T 3mbr_X 84 ------NHEGFVYDLATLTPRARFRYP--GEGWALTSDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNE 154 (243)
T ss_dssp ------SSEEEEEETTTTEEEEEEECS--SCCCEEEECSSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred ------CCEEEEEECCcCcEEEEEeCC--CCceEEeeCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCccccccee
Confidence 788999999887665433222 35666778888899997 589999999875322111111111 1 22344
Q ss_pred eEECCCCCEEEEEecCCccceeeeeeccccccEEeeccch
Q 046018 202 VRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLS 241 (310)
Q Consensus 202 i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~ 241 (310)
+... +|.||+..+....+ +.+++.+|+.+..+.+.
T Consensus 155 Le~~-~G~lyanvw~s~~I----~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 155 LEWV-NGELLANVWLTSRI----ARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp EEEE-TTEEEEEETTTTEE----EEECTTTCBEEEEEECG
T ss_pred eEEe-CCEEEEEECCCCeE----EEEECCCCCEEEEEECC
Confidence 5554 78999988877754 45566677777666553
No 94
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.28 E-value=6.4e-09 Score=88.15 Aligned_cols=185 Identities=11% Similarity=0.077 Sum_probs=121.6
Q ss_pred cccccCcEEEEEeCCCCC--eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCCceEEEeCCCCeE
Q 046018 3 YTGVADGRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLA 80 (310)
Q Consensus 3 ~~~~~~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~ 80 (310)
+++..++.|..|+.+... |.- ... ....++.+++++ +|+++++ ...+|+.+|+++..+
T Consensus 9 v~~~~~~~v~~~d~~tG~~~w~~-~~~-----------------~~~~~~~~~~~p-dG~ilvs-~~~~V~~~d~~G~~~ 68 (276)
T 3no2_A 9 VGGSGWNKIAIINKDTKEIVWEY-PLE-----------------KGWECNSVAATK-AGEILFS-YSKGAKMITRDGREL 68 (276)
T ss_dssp EECTTCSEEEEEETTTTEEEEEE-ECC-----------------TTCCCCEEEECT-TSCEEEE-CBSEEEEECTTSCEE
T ss_pred EeeCCCCEEEEEECCCCeEEEEe-CCC-----------------ccCCCcCeEECC-CCCEEEe-CCCCEEEECCCCCEE
Confidence 455567788888875554 651 110 002567889999 8999994 456799999954333
Q ss_pred EEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe--cC----Cccc
Q 046018 81 TQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL--QG----LAFA 154 (310)
Q Consensus 81 ~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~----~~~~ 154 (310)
-.+ .. . ....+.++.+.++|+ +++++.. ..++++.++++++....+. .. ...+
T Consensus 69 W~~-~~--~-~~~~~~~~~~~~dG~-~lv~~~~----------------~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~ 127 (276)
T 3no2_A 69 WNI-AA--P-AGCEMQTARILPDGN-ALVAWCG----------------HPSTILEVNMKGEVLSKTEFETGIERPHAQF 127 (276)
T ss_dssp EEE-EC--C-TTCEEEEEEECTTSC-EEEEEES----------------TTEEEEEECTTSCEEEEEEECCSCSSGGGSC
T ss_pred EEE-cC--C-CCccccccEECCCCC-EEEEecC----------------CCCEEEEEeCCCCEEEEEeccCCCCcccccc
Confidence 222 21 1 112356788999999 7777632 1567999998654333322 11 1246
Q ss_pred ceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeee-eCCCCCCeeEECCCCCEEEEEecCCccceeeeeecccc-c
Q 046018 155 NGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFA-ELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWL-G 232 (310)
Q Consensus 155 ~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~-g 232 (310)
.+++..++|+ ++++...+++|..||++|+ ..+. ..+..|.++.+.++|+++++...++. +..+++. |
T Consensus 128 ~~v~~~~~G~-~lv~~~~~~~v~~~d~~G~-----~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~-----v~~~d~~tG 196 (276)
T 3no2_A 128 RQINKNKKGN-YLVPLFATSEVREIAPNGQ-----LLNSVKLSGTPFSSAFLDNGDCLVACGDAHC-----FVQLNLESN 196 (276)
T ss_dssp SCCEECTTSC-EEEEETTTTEEEEECTTSC-----EEEEEECSSCCCEEEECTTSCEEEECBTTSE-----EEEECTTTC
T ss_pred cCceECCCCC-EEEEecCCCEEEEECCCCC-----EEEEEECCCCccceeEcCCCCEEEEeCCCCe-----EEEEeCcCC
Confidence 7888999998 6677788899999998743 1121 23356888999999999999887765 4455444 9
Q ss_pred cEEeecc
Q 046018 233 KTLLKLP 239 (310)
Q Consensus 233 ~~~~~~~ 239 (310)
+.+.++.
T Consensus 197 ~~~w~~~ 203 (276)
T 3no2_A 197 RIVRRVN 203 (276)
T ss_dssp CEEEEEE
T ss_pred cEEEEec
Confidence 9887764
No 95
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.28 E-value=9.1e-09 Score=85.64 Aligned_cols=199 Identities=12% Similarity=0.117 Sum_probs=121.3
Q ss_pred cceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
...+.||+++++++.||++.... .|+++|++ +++..-... . ....+.+|+++++|+ +|+++..
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l-~--g~~D~EGIa~~~~g~-~~vs~E~----------- 89 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL-D--FVKDLETIEYIGDNQ-FVISDER----------- 89 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC-S--SCSSEEEEEECSTTE-EEEEETT-----------
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec-C--CCCChHHeEEeCCCE-EEEEECC-----------
Confidence 35688999998678899876664 59999999 444332221 1 124688999999997 8898744
Q ss_pred hhcCCCCceEEEEeCCC-CeEE---EEecCC-ccc-----ceEEEecCCCeEEEEecCCc-eEEEEEccCCCC-Ccceee
Q 046018 125 ILSGDKTGRLLKYEKTT-KEVT---ILLQGL-AFA-----NGVALSRDRTFILIAETSNC-RILRFWLHGPNS-GKQDVF 192 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~-~~~~---~~~~~~-~~~-----~gi~~~~d~~~lyv~~~~~~-~i~~~~~~~~~~-~~~~~~ 192 (310)
.++++.++... +... ...-.. ..+ .||+++|++++||++..... +|+.++ +... ......
T Consensus 90 ------~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~ 161 (255)
T 3qqz_A 90 ------DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHIS 161 (255)
T ss_dssp ------TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEE
T ss_pred ------CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeee
Confidence 46677665432 2211 111111 123 79999999988999866554 788887 2100 111221
Q ss_pred ee------C-CCCCCeeEECCC-CCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCCCceEEEEECCC
Q 046018 193 AE------L-PGFPDNVRSNSN-GEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGKPHATAIKLSEK 264 (310)
Q Consensus 193 ~~------~-~~~p~~i~~d~~-G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 264 (310)
.. . -..+.++++|+. |++|+....++ +++.+|.+
T Consensus 162 ~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~--------------------------------------~L~~~d~~ 203 (255)
T 3qqz_A 162 KDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESR--------------------------------------ALQEVTLV 203 (255)
T ss_dssp ECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTT--------------------------------------EEEEECTT
T ss_pred cchhhccccccCCceeEEEcCCCCeEEEEECCCC--------------------------------------eEEEEcCC
Confidence 11 1 134678888876 46777655444 34566777
Q ss_pred CCEEEEEEcCCCC-----eecceeEEEE-eCCEEEEecCCCCeEEEecc
Q 046018 265 GEVLEVLEDCEGK-----TLSFISEVEE-KDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 265 g~~~~~~~~~~g~-----~~~~~~~~~~-~~g~l~vgs~~~~~i~~~~~ 307 (310)
|+++..+....|. .+.++..++. .+|+||+.|= .+.+++|..
T Consensus 204 g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE-~n~~y~f~~ 251 (255)
T 3qqz_A 204 GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE-PNRFYRFTP 251 (255)
T ss_dssp CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET-TTEEEEEEC
T ss_pred CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC-CceEEEEEe
Confidence 7766666544331 2345566654 3667887764 467777654
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.28 E-value=1.8e-09 Score=96.71 Aligned_cols=153 Identities=12% Similarity=0.148 Sum_probs=105.2
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..++++++...||++.... .|..+|.++++....... ...+.+++++|+|++++++......
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~~~--------- 277 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-----IGLPRGLLLSKDGKELYIAQFSASN--------- 277 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-----CSEEEEEEECTTSSEEEEEEEESCT---------
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-----CCCceEEEEcCCCCEEEEEECCCCc---------
Confidence 5678999999444577777554 489999988865433221 1247899999999877777632100
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEEC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSN 205 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 205 (310)
....++.|+.||+.+++..........+.+++++|+++.+|++...++.|.+|+.++++ ..........+..++++
T Consensus 278 -~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~---~~~~~~~~~~~~~~~~s 353 (433)
T 3bws_A 278 -QESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK---VQKSIPVFDKPNTIALS 353 (433)
T ss_dssp -TCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE---EEEEEECSSSEEEEEEC
T ss_pred -cccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc---EEEEecCCCCCCeEEEc
Confidence 00126789999998887655443344678999999999899998889999999987431 11111233557899999
Q ss_pred CCCC-EEEEEecC
Q 046018 206 SNGE-FWVALHAK 217 (310)
Q Consensus 206 ~~G~-l~va~~~~ 217 (310)
++|+ ||++....
T Consensus 354 ~dg~~l~~~~~~~ 366 (433)
T 3bws_A 354 PDGKYLYVSCRGP 366 (433)
T ss_dssp TTSSEEEEEECCC
T ss_pred CCCCEEEEEecCC
Confidence 9996 66665543
No 97
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.28 E-value=9.6e-10 Score=102.23 Aligned_cols=151 Identities=11% Similarity=0.133 Sum_probs=101.1
Q ss_pred cceeceEEEeC----CCCcEEEEECC-CceEEEeCCCCeEEEEEeecC---C----ccccCCcceEEeCCCCEEEEEeCC
Q 046018 46 CGRPLGIRFDK----KTGDLYIADAY-LGFQVVGPEGGLATQLVTEAA---G----QPLRFTNDLDIDEHKGVIYFTDSS 113 (310)
Q Consensus 46 ~~~p~gl~~d~----~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~---~----~~~~~~~~i~~d~~g~~l~v~~~~ 113 (310)
...|.++++++ +...||++... ..|..+|..+.+......... . .+...+..|++++++.+++++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 45788999998 78889999864 458888998877644433210 0 011256789999988867777643
Q ss_pred CchhhhhhhhhhhcCCCCceEEEEeCCCCeE-E-EEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCccee
Q 046018 114 TSFQRRQFMSSILSGDKTGRLLKYEKTTKEV-T-ILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDV 191 (310)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~-~-~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~ 191 (310)
++.|..||.++.+. . ........|.+++|+||++++|++...++.|.++|..+++. ...
T Consensus 301 -----------------~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l--~~~ 361 (543)
T 1nir_A 301 -----------------TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL--SAL 361 (543)
T ss_dssp -----------------TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEE--EEE
T ss_pred -----------------CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeE--EEe
Confidence 78899999876432 1 11233567899999999999999988889999999875422 111
Q ss_pred eeeCCCCC---CeeE-ECCC-CCEEEEEec
Q 046018 192 FAELPGFP---DNVR-SNSN-GEFWVALHA 216 (310)
Q Consensus 192 ~~~~~~~p---~~i~-~d~~-G~l~va~~~ 216 (310)
+ .....| .++. ++++ |.+|++...
T Consensus 362 i-~~g~~ph~g~g~~~~~p~~g~~~~s~~~ 390 (543)
T 1nir_A 362 V-DVGKTPHPGRGANFVHPKYGPVWSTSHL 390 (543)
T ss_dssp E-ECSSSBCCTTCEEEEETTTEEEEEEEBS
T ss_pred e-ccCCCCCCCCCcccCCCCCccEEEeccC
Confidence 1 111122 2333 4666 788888763
No 98
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.27 E-value=6.3e-09 Score=89.79 Aligned_cols=153 Identities=13% Similarity=0.203 Sum_probs=99.6
Q ss_pred ceeceEEEeCCCCc-EEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
..|..+++++ +|+ ||++....+ |..+|.+.+........... ...+.+++++|+|+++|+++..
T Consensus 84 ~~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~----------- 149 (343)
T 1ri6_A 84 GSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG--LDGCHSANISPDNRTLWVPALK----------- 149 (343)
T ss_dssp SCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC--CTTBCCCEECTTSSEEEEEEGG-----------
T ss_pred CCCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccC--CCCceEEEECCCCCEEEEecCC-----------
Confidence 4788999999 555 888877554 77777643332222222111 2358899999999978887632
Q ss_pred hhcCCCCceEEEEeCCC-CeEEEE-----e-cCCcccceEEEecCCCeEEEEecCCceEEEEEccC--CCCCcceeeeeC
Q 046018 125 ILSGDKTGRLLKYEKTT-KEVTIL-----L-QGLAFANGVALSRDRTFILIAETSNCRILRFWLHG--PNSGKQDVFAEL 195 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~-~~~~~~-----~-~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~--~~~~~~~~~~~~ 195 (310)
.+.|..||..+ ++.... . .....|.+++++||++.||++....+.|.+|+.+. +...........
T Consensus 150 ------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~ 223 (343)
T 1ri6_A 150 ------QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMM 223 (343)
T ss_dssp ------GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECS
T ss_pred ------CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecccc
Confidence 67789998876 655421 1 23346889999999999999987889999999863 211111222222
Q ss_pred C------CCCCeeEECCCCC-EEEEEecCCc
Q 046018 196 P------GFPDNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 196 ~------~~p~~i~~d~~G~-l~va~~~~~~ 219 (310)
+ ..|..++++++|+ ||++....+.
T Consensus 224 ~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~ 254 (343)
T 1ri6_A 224 PENFSDTRWAADIHITPDGRHLYACDRTASL 254 (343)
T ss_dssp CTTCCSCCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CccccccCCccceEECCCCCEEEEEecCCCE
Confidence 2 1344699999995 6666644443
No 99
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.27 E-value=3.1e-10 Score=94.56 Aligned_cols=190 Identities=11% Similarity=0.134 Sum_probs=118.1
Q ss_pred EEEEeCCCCC-eE-EEEEeccccccccCCCCCccc-cccceeceEEEeCCCCcEEEEECC-CceEEEeCCC-CeEEEE--
Q 046018 11 ILKWQGDELG-WT-EFAVTTSQRKECVRPFAPDIE-HICGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEG-GLATQL-- 83 (310)
Q Consensus 11 i~~~~~~~~~-W~-~~~~~~~~~~~~~~~~~~~~~-~~~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~-~~~~~~-- 83 (310)
-..|+++.+. |+ .-....+..+|..++....+. .....+.||++.+ +|.+||++.. ++++.++... +.+..+
T Consensus 31 Gla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~ 109 (255)
T 3qqz_A 31 SLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISLTPNSEVKILKK 109 (255)
T ss_dssp EEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEECTTCCEEEEEE
T ss_pred eeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEcCCCCeeeeeee
Confidence 3567776555 74 555566777777653211221 1225788999998 8899899876 4566664332 222211
Q ss_pred Eeec--CCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEe--CCCCeEEEEec-------CCc
Q 046018 84 VTEA--AGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYE--KTTKEVTILLQ-------GLA 152 (310)
Q Consensus 84 ~~~~--~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d--~~~~~~~~~~~-------~~~ 152 (310)
.... .........+|+.++++++||++... ....|+.++ +.+..+++... ...
T Consensus 110 ~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~----------------~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 110 IKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK----------------NPIEVYKVNGLLSSNELHISKDKALQRQFTLD 173 (255)
T ss_dssp EECCCSSCCCSSCCEEEEEETTTTEEEEEEES----------------SSEEEEEEESTTCSSCCEEEECHHHHHTCCSS
T ss_pred eccccccccccCCcceEEEeCCCCEEEEEECc----------------CCceEEEEcccccCCceeeecchhhccccccC
Confidence 1111 11122345899999999779998743 133688887 22223333211 234
Q ss_pred ccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC------CCCCCeeEECCCCCEEEEEecC
Q 046018 153 FANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL------PGFPDNVRSNSNGEFWVALHAK 217 (310)
Q Consensus 153 ~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~p~~i~~d~~G~l~va~~~~ 217 (310)
.+.+++++|..++||+.+..++.|..+|.++.......+.... -..|.||++|++|+|||++-.+
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 5789999999888999989999999999876422111111100 1268999999999999996554
No 100
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.25 E-value=6.3e-10 Score=95.24 Aligned_cols=163 Identities=15% Similarity=0.150 Sum_probs=108.8
Q ss_pred cceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecC----CccccCCcceEE---eCCCCEEEEE-eCCCch
Q 046018 46 CGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAA----GQPLRFTNDLDI---DEHKGVIYFT-DSSTSF 116 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~----~~~~~~~~~i~~---d~~g~~l~v~-~~~~~~ 116 (310)
.-.|.++++|+.++.+|+++... .|.+++++++....+ ..+. +.+...+.+|.+ |++|+ ||+. +....+
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af 89 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSF 89 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccccc
Confidence 35789999998789999999874 599999987655444 2211 223345789999 79987 8884 322111
Q ss_pred hhhhhhhhhhcCCCCceEEEEeCC---CCeEEEEec--------------CCcccceEEEecCCCeEEEEecCC-ceEEE
Q 046018 117 QRRQFMSSILSGDKTGRLLKYEKT---TKEVTILLQ--------------GLAFANGVALSRDRTFILIAETSN-CRILR 178 (310)
Q Consensus 117 ~~~~~~~~~~~~~~~g~v~~~d~~---~~~~~~~~~--------------~~~~~~gi~~~~d~~~lyv~~~~~-~~i~~ 178 (310)
.... ........|++||+. +++...... ....+++|+++++|+ .||+++.. +.|++
T Consensus 90 ~~~g-----~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~r 163 (334)
T 2p9w_A 90 NFAD-----QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIAR 163 (334)
T ss_dssp CTTS-----CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEE
T ss_pred cccc-----cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEE
Confidence 1000 001124679999988 555433221 223589999999998 99999999 99999
Q ss_pred EEccCCCCCcceeee-eCC-----CCCCeeEECCCCCEEEEEecCCc
Q 046018 179 FWLHGPNSGKQDVFA-ELP-----GFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~-~~~-----~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
+++++... ..+. ..+ -.++||++.++|++.++....++
T Consensus 164 V~pdG~~~---~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~ 207 (334)
T 2p9w_A 164 VSADGKTV---STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRA 207 (334)
T ss_dssp ECTTSCCE---EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSS
T ss_pred EeCCCCEE---eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCe
Confidence 99987522 2221 111 23689999999987776655555
No 101
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.21 E-value=1.4e-08 Score=87.40 Aligned_cols=179 Identities=7% Similarity=0.025 Sum_probs=110.4
Q ss_pred CcccccCcEEEEEeCCCCCeEEEEEeccccccccCCCCCccccccc---eeceEEEeCCCC-cEEEEECCC-ceEEEeCC
Q 046018 2 PYTGVADGRILKWQGDELGWTEFAVTTSQRKECVRPFAPDIEHICG---RPLGIRFDKKTG-DLYIADAYL-GFQVVGPE 76 (310)
Q Consensus 2 ~~~~~~~~~i~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~gl~~d~~~g-~l~v~~~~~-gi~~~d~~ 76 (310)
++++..++.|..|+.....-+.. ..... .|.++++++ +| .||++.... .|..+|..
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~------------------~~~~~~~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~ 64 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKV------------------ITIADAGPTPMVPMVAP-GGRIAYATVNKSESLVKIDLV 64 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEE------------------EECTTCTTCCCCEEECT-TSSEEEEEETTTTEEEEEETT
T ss_pred EEEcCCCCeEEEEECCCCcEEEE------------------EEcCCCCCCccceEEcC-CCCEEEEEeCCCCeEEEEECC
Confidence 34566778888888866421110 00112 578899999 65 688887764 49999998
Q ss_pred CCeEEEEEeecC-CccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCC--CCceEEEEeCCCCeEEEEecCCcc
Q 046018 77 GGLATQLVTEAA-GQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGD--KTGRLLKYEKTTKEVTILLQGLAF 153 (310)
Q Consensus 77 ~~~~~~~~~~~~-~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~--~~g~v~~~d~~~~~~~~~~~~~~~ 153 (310)
+++......... ......+.+++++|+|+++|++........ ... ..+.|+.||.++++..........
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~--------~~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 136 (337)
T 1pby_B 65 TGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL--------THFEVQPTRVALYDAETLSRRKAFEAPRQ 136 (337)
T ss_dssp TCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECS--------SCEEECCCEEEEEETTTTEEEEEEECCSS
T ss_pred CCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccc--------ccccccCceEEEEECCCCcEEEEEeCCCC
Confidence 877543333211 101226889999999987888852100000 000 147899999988876654444566
Q ss_pred cceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCC-EEEE
Q 046018 154 ANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGE-FWVA 213 (310)
Q Consensus 154 ~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~va 213 (310)
+.+++++||++.||++ ++.|++||..++.. .........+..+.++++|. +|++
T Consensus 137 ~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~ 191 (337)
T 1pby_B 137 ITMLAWARDGSKLYGL---GRDLHVMDPEAGTL---VEDKPIQSWEAETYAQPDVLAVWNQ 191 (337)
T ss_dssp CCCEEECTTSSCEEEE---SSSEEEEETTTTEE---EEEECSTTTTTTTBCCCBCCCCCCC
T ss_pred cceeEECCCCCEEEEe---CCeEEEEECCCCcE---eeeeeccccCCCceeCCCccEEeee
Confidence 8999999999989888 47899999875321 11111122223446667764 4444
No 102
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.19 E-value=3e-10 Score=99.83 Aligned_cols=162 Identities=12% Similarity=0.130 Sum_probs=102.7
Q ss_pred cccceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeec--CCccccCCcceEEeCC---CCEEEEEeCCCchh
Q 046018 44 HICGRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEA--AGQPLRFTNDLDIDEH---KGVIYFTDSSTSFQ 117 (310)
Q Consensus 44 ~~~~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~--~~~~~~~~~~i~~d~~---g~~l~v~~~~~~~~ 117 (310)
.....|.+|++++ +|+ |||++..+.|++++.++...+.+.... .......+.+|+++|+ +.+||++......
T Consensus 15 ~~l~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~- 92 (353)
T 2g8s_A 15 DKLDHPWALAFLP-DNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD- 92 (353)
T ss_dssp EEESSEEEEEECS-TTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS-
T ss_pred CCCCCcEEEEEcC-CCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC-
Confidence 3457899999999 899 999998767999987643212222111 0111235789999995 3349999742100
Q ss_pred hhhhhhhhhcCCCCceEEEEeCCCC-----eEEEEecC-------CcccceEEEecCCCeEEEEecC-------------
Q 046018 118 RRQFMSSILSGDKTGRLLKYEKTTK-----EVTILLQG-------LAFANGVALSRDRTFILIAETS------------- 172 (310)
Q Consensus 118 ~~~~~~~~~~~~~~g~v~~~d~~~~-----~~~~~~~~-------~~~~~gi~~~~d~~~lyv~~~~------------- 172 (310)
.+....+|.+++.+.+ ..+.+... ...+++|+++|||. ||++...
T Consensus 93 ---------~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~ 162 (353)
T 2g8s_A 93 ---------DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKL 162 (353)
T ss_dssp ---------SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSC
T ss_pred ---------CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCC
Confidence 0001346888876432 23333222 23378999999995 9998522
Q ss_pred CceEEEEEccCCCC----------CcceeeeeCCCCCCeeEECC-CCCEEEEEecC
Q 046018 173 NCRILRFWLHGPNS----------GKQDVFAELPGFPDNVRSNS-NGEFWVALHAK 217 (310)
Q Consensus 173 ~~~i~~~~~~~~~~----------~~~~~~~~~~~~p~~i~~d~-~G~l~va~~~~ 217 (310)
.++|+++++++... ...+.++.--..|.++++|+ +|+||++++..
T Consensus 163 ~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 163 QGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGP 218 (353)
T ss_dssp TTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECS
T ss_pred CeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCC
Confidence 36899999986411 02233433224689999999 89999999874
No 103
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.18 E-value=2.3e-08 Score=88.04 Aligned_cols=65 Identities=8% Similarity=0.039 Sum_probs=45.5
Q ss_pred ceeceEEEeCCCCcEEEEEC----------CCceEEEeCCCCeEEEEEeecCC--ccccCCcceEEeCCCCEEEEEeC
Q 046018 47 GRPLGIRFDKKTGDLYIADA----------YLGFQVVGPEGGLATQLVTEAAG--QPLRFTNDLDIDEHKGVIYFTDS 112 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~----------~~gi~~~d~~~~~~~~~~~~~~~--~~~~~~~~i~~d~~g~~l~v~~~ 112 (310)
..| +++++++...||++.. .+.|..+|..+.+....+..... .....|.+|+++|+|++||+++.
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~ 127 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNA 127 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEE
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECC
Confidence 567 9999995557999974 12388999987765433332111 11347999999999999999874
No 104
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.17 E-value=5.9e-09 Score=87.27 Aligned_cols=152 Identities=11% Similarity=0.103 Sum_probs=97.6
Q ss_pred cCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEec--CCcccceEEEecCCCeEEEEe
Q 046018 93 RFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQ--GLAFANGVALSRDRTFILIAE 170 (310)
Q Consensus 93 ~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--~~~~~~gi~~~~d~~~lyv~~ 170 (310)
.++.+|+++++|+ ||+++.. ...+.|.++|+++++...... ...++.|++++ ++.||++.
T Consensus 21 ~f~~Gl~~~~dg~-Lyvstg~---------------~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t 82 (266)
T 2iwa_A 21 AFTQGLVYAENDT-LFESTGL---------------YGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVV 82 (266)
T ss_dssp CCEEEEEECSTTE-EEEEECS---------------TTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEE
T ss_pred CCcccEEEeCCCe-EEEECCC---------------CCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEE
Confidence 3678999999986 9999732 125689999999998765432 23344566665 56799999
Q ss_pred cCCceEEEEEccCCCCCcceeeee--CCCCCCeeEECCCC-CEEEEEecCCccceeeeeeccccccEEeeccchhhhhcc
Q 046018 171 TSNCRILRFWLHGPNSGKQDVFAE--LPGFPDNVRSNSNG-EFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHS 247 (310)
Q Consensus 171 ~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G-~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~ 247 (310)
..++.++++|.+.. +.... .+ .|.+..+.+|| .+|+++ ..+.
T Consensus 83 ~~~~~v~viD~~t~-----~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~---------------------------- 127 (266)
T 2iwa_A 83 WLKNIGFIYDRRTL-----SNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSI---------------------------- 127 (266)
T ss_dssp TTCSEEEEEETTTT-----EEEEEEECC-SSSCCEEEECSSSEEEEC-SSSE----------------------------
T ss_pred ecCCEEEEEECCCC-----cEEEEEECC-CCCeEEEEECCCEEEEEC-CCCe----------------------------
Confidence 99999999997642 22222 22 23444344444 798876 3332
Q ss_pred cccCCCCceEEEEECCCC-CEEEEEEc-CCCCeecceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 248 LLVGGKPHATAIKLSEKG-EVLEVLED-CEGKTLSFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 248 ~~~~~~~~~~~~~~d~~g-~~~~~~~~-~~g~~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
+..+|+.. +++....- ..+.++..+..+...+++||+..+.++.|.++|.
T Consensus 128 ----------l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~ 179 (266)
T 2iwa_A 128 ----------LYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISA 179 (266)
T ss_dssp ----------EEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEET
T ss_pred ----------EEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEEC
Confidence 23445543 44444432 1234444455555557899998888899999886
No 105
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.16 E-value=1.6e-09 Score=98.25 Aligned_cols=168 Identities=12% Similarity=0.154 Sum_probs=105.4
Q ss_pred ccccceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCc----cccCCcceEEeCC---CCEEEEEeCCC
Q 046018 43 EHICGRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQ----PLRFTNDLDIDEH---KGVIYFTDSST 114 (310)
Q Consensus 43 ~~~~~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~----~~~~~~~i~~d~~---g~~l~v~~~~~ 114 (310)
......|.+|++++ +|+|||++...+ |++++..+++.+.+....... ....+.+|+++|+ +++||++.+..
T Consensus 23 a~~l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~ 101 (454)
T 1cru_A 23 LSNLNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFK 101 (454)
T ss_dssp ECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred ECCCCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecc
Confidence 33457899999999 999999998864 999988766665554332110 1234569999994 44499997420
Q ss_pred chhhhhhhhhhhcCCCCceEEEEeCCC--CeE---EEEec-----CCcccceEEEecCCCeEEEEecC------------
Q 046018 115 SFQRRQFMSSILSGDKTGRLLKYEKTT--KEV---TILLQ-----GLAFANGVALSRDRTFILIAETS------------ 172 (310)
Q Consensus 115 ~~~~~~~~~~~~~~~~~g~v~~~d~~~--~~~---~~~~~-----~~~~~~gi~~~~d~~~lyv~~~~------------ 172 (310)
.-.... .......+|++++.+. +++ +++.. ....+++|+++|||+ ||++.-.
T Consensus 102 ~~~~~~-----~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd~~~~~~~~~~~~ 175 (454)
T 1cru_A 102 NPKSTD-----KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGDQGRNQLAYLFLP 175 (454)
T ss_dssp CTTC-------CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECCTTTTSGGGTTSC
T ss_pred ccCCCc-----cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECCCCCCCccccccc
Confidence 000000 0000134688886532 222 23321 234578999999997 9997321
Q ss_pred --------------------CceEEEEEccCCCC-C-------cceeeeeCCCCCCeeEECCCCCEEEEEecC
Q 046018 173 --------------------NCRILRFWLHGPNS-G-------KQDVFAELPGFPDNVRSNSNGEFWVALHAK 217 (310)
Q Consensus 173 --------------------~~~i~~~~~~~~~~-~-------~~~~~~~~~~~p~~i~~d~~G~l~va~~~~ 217 (310)
.++|+++++++... . ..++++.--..|.++++|++|+||++++..
T Consensus 176 ~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~L~~~d~g~ 248 (454)
T 1cru_A 176 NQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGKLLQSEQGP 248 (454)
T ss_dssp CCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSCEEEEEECS
T ss_pred cccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCCEEEEecCC
Confidence 36899999886411 0 123343322468999999999999999864
No 106
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.15 E-value=8.7e-09 Score=89.63 Aligned_cols=166 Identities=14% Similarity=0.130 Sum_probs=103.7
Q ss_pred cceeceEEEeCC---CCcEEEEEC---CCceEEEeCCCC--------eEEEEEeecCCccccCCcceEEeCCCCEEEEEe
Q 046018 46 CGRPLGIRFDKK---TGDLYIADA---YLGFQVVGPEGG--------LATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTD 111 (310)
Q Consensus 46 ~~~p~gl~~d~~---~g~l~v~~~---~~gi~~~d~~~~--------~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~ 111 (310)
...+.||+++++ ++.||++.. ..+|.|+..+.+ ..+.+.........+....|++++||. |||+.
T Consensus 79 ~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~ 157 (347)
T 3das_A 79 EGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGT 157 (347)
T ss_dssp TBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEEC
T ss_pred CCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEE
Confidence 467899999983 588999753 245888866541 223343332223456788999999999 99996
Q ss_pred CCCchhhhhhhhhhhcCCCCceEEEEeCCCC--------eEEEEecCCcccceEEEecCCCeEEEEecCCc---eEEEEE
Q 046018 112 SSTSFQRRQFMSSILSGDKTGRLLKYEKTTK--------EVTILLQGLAFANGVALSRDRTFILIAETSNC---RILRFW 180 (310)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--------~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~---~i~~~~ 180 (310)
-...... ...-.....|.|+++++++. ..+++..++..|.|++++|+++ ||+++...+ .|.++.
T Consensus 158 Gd~~~~~----~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~ 232 (347)
T 3das_A 158 GESGDTG----LSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIK 232 (347)
T ss_dssp BCTTCGG----GTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEEC
T ss_pred CCCCCCc----cccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEc
Confidence 3210000 00001124688999999854 3456677888899999999876 999987653 455553
Q ss_pred ccCCCCCcc------------eeeee-CC--CCCCeeEECCCCCEEEEEecCCc
Q 046018 181 LHGPNSGKQ------------DVFAE-LP--GFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 181 ~~~~~~~~~------------~~~~~-~~--~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
.++.-+.. ..+.. .+ ..|.+|++. +|.+|++...+..
T Consensus 233 -~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~ 284 (347)
T 3das_A 233 -PGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGER 284 (347)
T ss_dssp -TTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCS
T ss_pred -CCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCE
Confidence 22221110 01111 11 256788886 5889999887654
No 107
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.15 E-value=5.4e-09 Score=93.65 Aligned_cols=101 Identities=8% Similarity=-0.135 Sum_probs=66.0
Q ss_pred ccccccccCCCCCccccccceeceEEEeCCCCcEEEEEC----------CCceEEEeCCCCeEEEEEeecCCc---cccC
Q 046018 28 TSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADA----------YLGFQVVGPEGGLATQLVTEAAGQ---PLRF 94 (310)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~----------~~gi~~~d~~~~~~~~~~~~~~~~---~~~~ 94 (310)
.+..+|..+.+..........| +++++++...|||++. .+.|..+|..+.+...-+...... ....
T Consensus 100 ~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~ 178 (426)
T 3c75_H 100 QQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTY 178 (426)
T ss_dssp EEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC
T ss_pred eEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCC
Confidence 3444555442212222334568 9999996667999984 134999999988764433321011 1346
Q ss_pred CcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEE
Q 046018 95 TNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVT 145 (310)
Q Consensus 95 ~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 145 (310)
|.+++++|||+++|+++.. ..+.|..+|.++++..
T Consensus 179 P~~~~~spDGk~lyV~n~~----------------~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 179 QWMNALTPDNKNLLFYQFS----------------PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp GGGSEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEE
T ss_pred cceEEEcCCCCEEEEEecC----------------CCCeEEEEECCCCeEE
Confidence 8999999999999999742 2466888888877654
No 108
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.15 E-value=4.2e-09 Score=92.48 Aligned_cols=129 Identities=11% Similarity=0.112 Sum_probs=82.6
Q ss_pred cceeceEEEeCC---CCcEEEEECC--------CceEEEeCCCC--eE---EEEEeecCC--ccccCCcceEEeCCCCEE
Q 046018 46 CGRPLGIRFDKK---TGDLYIADAY--------LGFQVVGPEGG--LA---TQLVTEAAG--QPLRFTNDLDIDEHKGVI 107 (310)
Q Consensus 46 ~~~p~gl~~d~~---~g~l~v~~~~--------~gi~~~d~~~~--~~---~~~~~~~~~--~~~~~~~~i~~d~~g~~l 107 (310)
...+.+|+++++ ++.||++... ..|.+++.+.. .+ +.+...... ...+.+++|+++|||. |
T Consensus 65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-L 143 (353)
T 2g8s_A 65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-L 143 (353)
T ss_dssp TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-E
T ss_pred CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-E
Confidence 357889999985 6899999753 24888765432 22 223332221 2346789999999997 9
Q ss_pred EEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCC-------------eEEEEecCCcccceEEEecCCCeEEEEecCCc
Q 046018 108 YFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTK-------------EVTILLQGLAFANGVALSRDRTFILIAETSNC 174 (310)
Q Consensus 108 ~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-------------~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~ 174 (310)
|++...... . . ...-.....|+|+++++++. ..+++..++..|.|++++|+...||+++...+
T Consensus 144 yv~~Gd~~~-~-~--~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~ 219 (353)
T 2g8s_A 144 FIALGENNQ-R-P--TAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPR 219 (353)
T ss_dssp EEEECCTTC-G-G--GGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSB
T ss_pred EEEECCCCC-C-C--ccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCC
Confidence 999733110 0 0 00001123678999999853 34456667788999999995455999987643
Q ss_pred ---eEEEE
Q 046018 175 ---RILRF 179 (310)
Q Consensus 175 ---~i~~~ 179 (310)
.|.++
T Consensus 220 ~~dei~~i 227 (353)
T 2g8s_A 220 GGDEINIP 227 (353)
T ss_dssp SCEEEECC
T ss_pred CCcEEeEe
Confidence 55544
No 109
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.12 E-value=6.2e-08 Score=83.24 Aligned_cols=150 Identities=17% Similarity=0.086 Sum_probs=97.4
Q ss_pred EEEEEC-CCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeC
Q 046018 61 LYIADA-YLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEK 139 (310)
Q Consensus 61 l~v~~~-~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 139 (310)
++++.. .+.|..+|..+++........ . ....|.+++++|+|+++|++... .+.|+.||.
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~s~dg~~l~v~~~~-----------------~~~v~~~d~ 63 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIA-D-AGPTPMVPMVAPGGRIAYATVNK-----------------SESLVKIDL 63 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECT-T-CTTCCCCEEECTTSSEEEEEETT-----------------TTEEEEEET
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcC-C-CCCCccceEEcCCCCEEEEEeCC-----------------CCeEEEEEC
Confidence 334433 345888899888764433321 1 00038899999999878888743 678999999
Q ss_pred CCCeEEEEecCCc------ccceEEEecCCCeEEEEec-----------CCceEEEEEccCCCCCcceeeeeCCCCCCee
Q 046018 140 TTKEVTILLQGLA------FANGVALSRDRTFILIAET-----------SNCRILRFWLHGPNSGKQDVFAELPGFPDNV 202 (310)
Q Consensus 140 ~~~~~~~~~~~~~------~~~gi~~~~d~~~lyv~~~-----------~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i 202 (310)
++++......... .|.+++++||++.||++.. ..+.|++||.+++. .......+..|.++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~~~~~~~~~~~~~~ 140 (337)
T 1pby_B 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS---RRKAFEAPRQITML 140 (337)
T ss_dssp TTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE---EEEEEECCSSCCCE
T ss_pred CCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc---EEEEEeCCCCccee
Confidence 8877654332222 6889999999998999852 35899999986431 11112234568899
Q ss_pred EECCCCC-EEEEEecCCccceeeeeec-cccccEEeeccc
Q 046018 203 RSNSNGE-FWVALHAKKGLFGKLILLN-SWLGKTLLKLPL 240 (310)
Q Consensus 203 ~~d~~G~-l~va~~~~~~~~~~~i~~~-~~~g~~~~~~~~ 240 (310)
+++++|+ ||++ ++. +..+ ...++....++.
T Consensus 141 ~~s~dg~~l~~~---~~~-----i~~~d~~~~~~~~~~~~ 172 (337)
T 1pby_B 141 AWARDGSKLYGL---GRD-----LHVMDPEAGTLVEDKPI 172 (337)
T ss_dssp EECTTSSCEEEE---SSS-----EEEEETTTTEEEEEECS
T ss_pred EECCCCCEEEEe---CCe-----EEEEECCCCcEeeeeec
Confidence 9999997 7777 233 3333 345666555443
No 110
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.09 E-value=1.9e-08 Score=88.95 Aligned_cols=74 Identities=14% Similarity=0.039 Sum_probs=48.9
Q ss_pred EEEecCCCeEEEEec---------CCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCC-EEEEEe-cCCccceeee
Q 046018 157 VALSRDRTFILIAET---------SNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGE-FWVALH-AKKGLFGKLI 225 (310)
Q Consensus 157 i~~~~d~~~lyv~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~va~~-~~~~~~~~~i 225 (310)
+++++|+++||++.. .++.|+++|..+.+. ...+ ..++.|.++++++||+ ++++.+ ..+.+ .
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i-~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V----~ 344 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQI-SLGHDVDAISVAQDGGPDLYALSAGTEVL----H 344 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEE-ECCCCcCeEEECCCCCeEEEEEcCCCCeE----E
Confidence 889999999999754 246899999764311 1112 3456799999999998 555555 45543 3
Q ss_pred eeccccccEEee
Q 046018 226 LLNSWLGKTLLK 237 (310)
Q Consensus 226 ~~~~~~g~~~~~ 237 (310)
.++..+++.+..
T Consensus 345 ViD~~t~~vv~~ 356 (373)
T 2mad_H 345 IYDAGAGDQDQS 356 (373)
T ss_pred EEECCCCCEEee
Confidence 334456666655
No 111
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.08 E-value=6.8e-08 Score=89.73 Aligned_cols=222 Identities=15% Similarity=0.127 Sum_probs=127.0
Q ss_pred ceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..+++++ +|+..++....+ |..+|..+..+..+ .. ....+.+++++|+|+ .+++..
T Consensus 345 ~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~~~~~~~~~-~~----~~~~v~~~~~s~dg~-~l~~~~------------- 404 (577)
T 2ymu_A 345 SSVWGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTL-TG----HSSSVRGVAFSPDGQ-TIASAS------------- 404 (577)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTCCEEEEE-EC----CSSCEEEEEECTTSS-CEEEEE-------------
T ss_pred CCEEEEEECC-CCCEEEEEeCCCEEEEEcCCCCEEEEe-cC----CCCCeEEEEECCCCC-EEEEEe-------------
Confidence 4456789999 776555544444 67778765543333 21 112467899999999 444432
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEEC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSN 205 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 205 (310)
.++.|..||........+........+++++||++.|..+ ..++.|..|+..+. ....+.........++++
T Consensus 405 ----~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~-~~d~~v~~w~~~~~---~~~~~~~~~~~v~~~~~s 476 (577)
T 2ymu_A 405 ----DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASA-SDDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFS 476 (577)
T ss_dssp ----TTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTSC---EEEEEECCSSCEEEEEEC
T ss_pred ----CCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEE-cCCCEEEEEECCCC---EEEEEcCCCCCEEEEEEc
Confidence 2678899997654444444334456789999999955544 67789999996542 112222222345678999
Q ss_pred CCCCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCCCc--------eEEEEECCCCCEEEEEEcCCCC
Q 046018 206 SNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGKPH--------ATAIKLSEKGEVLEVLEDCEGK 277 (310)
Q Consensus 206 ~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~d~~g~~~~~~~~~~g~ 277 (310)
++|++.++....+. +..++.+++.+..+......+.++.+..... ..+.-+|.+++.+..+..+.
T Consensus 477 pd~~~las~~~d~~-----i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~-- 549 (577)
T 2ymu_A 477 PDGQTIASASDDKT-----VKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS-- 549 (577)
T ss_dssp TTSCEEEEEETTSE-----EEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCS--
T ss_pred CCCCEEEEEeCCCE-----EEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCC--
Confidence 99998777666554 5566667777666544333333444432222 12222354555555554332
Q ss_pred eecceeEEEEe-CCEEEEecCCCCeEEEe
Q 046018 278 TLSFISEVEEK-DGQLWMGSVLMPFIGIY 305 (310)
Q Consensus 278 ~~~~~~~~~~~-~g~l~vgs~~~~~i~~~ 305 (310)
..++.+... +|++.+..-.+..|.+.
T Consensus 550 --~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 550 --SSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp --SCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred --CCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 234555544 44443333223445443
No 112
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.07 E-value=1.2e-08 Score=89.68 Aligned_cols=153 Identities=15% Similarity=0.136 Sum_probs=98.6
Q ss_pred ceeceEEEeCCCC-cEEEEECC-CceEEEeCC-CCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhh
Q 046018 47 GRPLGIRFDKKTG-DLYIADAY-LGFQVVGPE-GGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 47 ~~p~gl~~d~~~g-~l~v~~~~-~gi~~~d~~-~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~ 123 (310)
..|+++++++ +| .||+++.. ..|..++.+ +++++.+...........|.+++++|+|+++|+++..
T Consensus 145 ~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~---------- 213 (365)
T 1jof_A 145 TGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA---------- 213 (365)
T ss_dssp CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT----------
T ss_pred CcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC----------
Confidence 5788999999 66 48888765 458888877 6766543222100113468999999999988988743
Q ss_pred hhhcCCCCceEEE--EeCCCCeEE----EEec---CC---c-------ccceEE-EecCCCeEEEEecCCc-----eEEE
Q 046018 124 SILSGDKTGRLLK--YEKTTKEVT----ILLQ---GL---A-------FANGVA-LSRDRTFILIAETSNC-----RILR 178 (310)
Q Consensus 124 ~~~~~~~~g~v~~--~d~~~~~~~----~~~~---~~---~-------~~~gi~-~~~d~~~lyv~~~~~~-----~i~~ 178 (310)
.+.|.. ++.++++.. .+.. .. . .+.+++ ++|||++||+++...+ .|.+
T Consensus 214 -------~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v 286 (365)
T 1jof_A 214 -------GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAG 286 (365)
T ss_dssp -------TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEE
T ss_pred -------CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEE
Confidence 445544 555566543 1211 10 1 478899 9999999999887665 8999
Q ss_pred EEccCCCCCccee---eee-CCCCCCeeEECC---CCC-EEEEEecCCc
Q 046018 179 FWLHGPNSGKQDV---FAE-LPGFPDNVRSNS---NGE-FWVALHAKKG 219 (310)
Q Consensus 179 ~~~~~~~~~~~~~---~~~-~~~~p~~i~~d~---~G~-l~va~~~~~~ 219 (310)
|+.+. .+.... ... ....|.++++++ +|+ |++++...+.
T Consensus 287 ~~~~~--~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~ 333 (365)
T 1jof_A 287 FKLRD--CGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGW 333 (365)
T ss_dssp EEECT--TSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCE
T ss_pred EEECC--CCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCe
Confidence 98862 122222 122 234688999999 775 6666554443
No 113
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.07 E-value=4.9e-08 Score=85.23 Aligned_cols=157 Identities=10% Similarity=0.070 Sum_probs=104.6
Q ss_pred ccccceeceEEEeCCCCcEEEEEC------------C-CceEEEeCCC--CeEEEEEeec--CCccccCCcceEEeC--C
Q 046018 43 EHICGRPLGIRFDKKTGDLYIADA------------Y-LGFQVVGPEG--GLATQLVTEA--AGQPLRFTNDLDIDE--H 103 (310)
Q Consensus 43 ~~~~~~p~gl~~d~~~g~l~v~~~------------~-~gi~~~d~~~--~~~~~~~~~~--~~~~~~~~~~i~~d~--~ 103 (310)
......|..|++++ +|.+|++.. . +.|+++|+++ .+.+.+.... .+...-.|.+|.+.+ +
T Consensus 46 ~~~~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d 124 (355)
T 3sre_A 46 KGIDNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD 124 (355)
T ss_dssp TTCCSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT
T ss_pred CCCCCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC
Confidence 33346788999999 899999972 2 3499999873 4444442221 112234789999865 4
Q ss_pred CC-EEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe----cCCcccceEEEecCCCeEEEEec-------
Q 046018 104 KG-VIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL----QGLAFANGVALSRDRTFILIAET------- 171 (310)
Q Consensus 104 g~-~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~----~~~~~~~gi~~~~d~~~lyv~~~------- 171 (310)
|+ +||+++... ....-.+++++++++..+.+. .....||.++++++|+ +|+++.
T Consensus 125 g~~~L~Vvnh~~-------------~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~ 190 (355)
T 3sre_A 125 NTVYLLVVNHPG-------------SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPY 190 (355)
T ss_dssp CCEEEEEEECST-------------TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHH
T ss_pred CcEEEEEEECCC-------------CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcc
Confidence 53 489988541 112345888998866554432 2356799999999987 888764
Q ss_pred ----------CCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCC-CEEEEEecCCc
Q 046018 172 ----------SNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNG-EFWVALHAKKG 219 (310)
Q Consensus 172 ----------~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~l~va~~~~~~ 219 (310)
..++|+++++. ..+.+.+.-..|+|+++++|| .|||++...+.
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~~-----~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~ 244 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSPN-----DVRVVAEGFDFANGINISPDGKYVYIAELLAHK 244 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECTT-----CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred cccchhhccCCccEEEEEECC-----eEEEeecCCcccCcceECCCCCEEEEEeCCCCe
Confidence 24689998763 233333322469999999999 69999887665
No 114
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.07 E-value=6.2e-08 Score=79.61 Aligned_cols=154 Identities=16% Similarity=0.085 Sum_probs=102.6
Q ss_pred ccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEec
Q 046018 92 LRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAET 171 (310)
Q Consensus 92 ~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~ 171 (310)
..+..+++++. ++ ||+++.. .....|.++|+++++......-...+.|..++.++++||++..
T Consensus 20 ~~ftqGL~~~~-~~-LyestG~---------------~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw 82 (243)
T 3mbr_X 20 TAFTEGLFYLR-GH-LYESTGE---------------TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW 82 (243)
T ss_dssp TCCEEEEEEET-TE-EEEEECC---------------TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES
T ss_pred ccccccEEEEC-CE-EEEECCC---------------CCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe
Confidence 34667899986 55 9999842 1245799999999987654433333444444445677999988
Q ss_pred CCceEEEEEccCCCCCcceeeee--CCCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcccc
Q 046018 172 SNCRILRFWLHGPNSGKQDVFAE--LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLL 249 (310)
Q Consensus 172 ~~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~ 249 (310)
.++.+++||.++. +.... .++.+.+++.|. +.||+++. ...
T Consensus 83 ~~~~v~v~D~~tl-----~~~~ti~~~~~Gwglt~dg-~~L~vSdg-s~~------------------------------ 125 (243)
T 3mbr_X 83 RNHEGFVYDLATL-----TPRARFRYPGEGWALTSDD-SHLYMSDG-TAV------------------------------ 125 (243)
T ss_dssp SSSEEEEEETTTT-----EEEEEEECSSCCCEEEECS-SCEEEECS-SSE------------------------------
T ss_pred eCCEEEEEECCcC-----cEEEEEeCCCCceEEeeCC-CEEEEECC-CCe------------------------------
Confidence 8999999998642 22222 335567887663 57999873 332
Q ss_pred cCCCCceEEEEECCC-CCEEEEEEc-CCCCeecceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 250 VGGKPHATAIKLSEK-GEVLEVLED-CEGKTLSFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 250 ~~~~~~~~~~~~d~~-g~~~~~~~~-~~g~~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
+..+|+. .+++..+.- .+|.++..+..+...+|+||+..+.++.|.++|.
T Consensus 126 --------l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 126 --------IRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDP 177 (243)
T ss_dssp --------EEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECT
T ss_pred --------EEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEEC
Confidence 2345554 344444432 2455556666666779999999999999999986
No 115
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.06 E-value=1.3e-07 Score=88.00 Aligned_cols=167 Identities=10% Similarity=-0.003 Sum_probs=113.4
Q ss_pred cceeceEEEeCCCCcEEEEECCCceEEEeCC--CCeEEEEEeecCCccccCCcceEEe----CCCCEEEEEeCCCchhhh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAYLGFQVVGPE--GGLATQLVTEAAGQPLRFTNDLDID----EHKGVIYFTDSSTSFQRR 119 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~--~~~~~~~~~~~~~~~~~~~~~i~~d----~~g~~l~v~~~~~~~~~~ 119 (310)
...|++++++++...||++.....|..+|.. +.+.. .....+ ..|.+++++ |||+++|+++..
T Consensus 196 g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~i~~G---~~P~~ia~s~~~~pDGk~l~v~n~~------ 264 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AEIKIG---SEARSIETSKMEGWEDKYAIAGAYW------ 264 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EEEECC---SEEEEEEECCSTTCTTTEEEEEEEE------
T ss_pred CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EEEecC---CCCceeEEccccCCCCCEEEEEEcc------
Confidence 3578899999944568998766669999985 55432 222122 358899999 699999999843
Q ss_pred hhhhhhhcCCCCceEEEEeCCCCeEEEEec-CC-----------cccceEEEecCCCeEEEEecCCceEEEEEccCCCCC
Q 046018 120 QFMSSILSGDKTGRLLKYEKTTKEVTILLQ-GL-----------AFANGVALSRDRTFILIAETSNCRILRFWLHGPNSG 187 (310)
Q Consensus 120 ~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~-----------~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~ 187 (310)
.+.|..+|..+.+...... .. ....+|..++++..++++...++.|+.+|.....
T Consensus 265 -----------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~-- 331 (567)
T 1qks_A 265 -----------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLN-- 331 (567)
T ss_dssp -----------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSS--
T ss_pred -----------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCc--
Confidence 6788999988765543221 11 1335788898888778887888999999976421
Q ss_pred ccee-eeeCCCCCCeeEECCCCC-EEEEEecCCccceeeeeeccccccEEeeccc
Q 046018 188 KQDV-FAELPGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLNSWLGKTLLKLPL 240 (310)
Q Consensus 188 ~~~~-~~~~~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~ 240 (310)
.... .......|.++.+|++|+ +|+++...+.+ ..++..+++++..++.
T Consensus 332 ~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V----~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 332 NLKTTEISAERFLHDGGLDGSHRYFITAANARNKL----VVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEE----EEEETTTTEEEEEEEC
T ss_pred cceeeeeeccccccCceECCCCCEEEEEeCCCCeE----EEEECCCCcEEEEEec
Confidence 1111 112334678899999996 56777666664 4455677777666655
No 116
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.06 E-value=1.8e-07 Score=80.82 Aligned_cols=146 Identities=12% Similarity=0.157 Sum_probs=96.1
Q ss_pred eeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
....+++++ +++.+++.... .|..++.++++....... ....+..++++|+|++|..+.
T Consensus 124 ~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~----~~~~v~~~~~spdg~~lasg~--------------- 183 (321)
T 3ow8_A 124 DAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDT----RGKFILSIAYSPDGKYLASGA--------------- 183 (321)
T ss_dssp CCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEEC----SSSCEEEEEECTTSSEEEEEE---------------
T ss_pred cEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecC----CCceEEEEEECCCCCEEEEEc---------------
Confidence 345689999 77766665554 488888887765433221 123467899999999444433
Q ss_pred cCCCCceEEEEeCCCCeEEEEecCC-cccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEEC
Q 046018 127 SGDKTGRLLKYEKTTKEVTILLQGL-AFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSN 205 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~~~~~~~~-~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 205 (310)
.++.|..||..+++........ .....++++||++. +++...++.|.+||...... ...+..-......+++.
T Consensus 184 ---~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~-l~s~s~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~s 257 (321)
T 3ow8_A 184 ---IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL-LVTASDDGYIKIYDVQHANL--AGTLSGHASWVLNVAFC 257 (321)
T ss_dssp ---TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCE-EEEECTTSCEEEEETTTCCE--EEEECCCSSCEEEEEEC
T ss_pred ---CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCE-EEEEcCCCeEEEEECCCcce--eEEEcCCCCceEEEEEC
Confidence 2778999999888765444333 34588999999984 45557788999999874311 11121122334678999
Q ss_pred CCCCEEEEEecCCc
Q 046018 206 SNGEFWVALHAKKG 219 (310)
Q Consensus 206 ~~G~l~va~~~~~~ 219 (310)
++|.+.++....+.
T Consensus 258 p~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 258 PDDTHFVSSSSDKS 271 (321)
T ss_dssp TTSSEEEEEETTSC
T ss_pred CCCCEEEEEeCCCc
Confidence 99988777666554
No 117
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.04 E-value=6e-08 Score=85.10 Aligned_cols=154 Identities=11% Similarity=0.043 Sum_probs=91.2
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
.....+++.+ ++++.++...+.|..+|..+++...........-...+..++++|+|+ ..++..
T Consensus 95 ~~V~~~~~s~-d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~sgs-------------- 158 (357)
T 4g56_B 95 AGVTDVAWVS-EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGT-QAVSGG-------------- 158 (357)
T ss_dssp SCEEEEEEET-TTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSS-EEEEEE--------------
T ss_pred CCEEEEEEcC-CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCC-EEEEEe--------------
Confidence 3466899999 888888876655777787766432211110001123467899999999 444432
Q ss_pred cCCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEEC
Q 046018 127 SGDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSN 205 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 205 (310)
.++.|..||..+++....... ......+++++++..++++...++.|.+||...++.............+..+++.
T Consensus 159 ---~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~s 235 (357)
T 4g56_B 159 ---KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWH 235 (357)
T ss_dssp ---TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEEC
T ss_pred ---CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhh
Confidence 277899999988876654433 3346789999998766777677889999998643221111111112335678888
Q ss_pred CCC-CEEEEEecCCc
Q 046018 206 SNG-EFWVALHAKKG 219 (310)
Q Consensus 206 ~~G-~l~va~~~~~~ 219 (310)
+++ +++++....+.
T Consensus 236 p~~~~~la~g~~d~~ 250 (357)
T 4g56_B 236 PEKDDTFACGDETGN 250 (357)
T ss_dssp TTSTTEEEEEESSSC
T ss_pred hcccceEEEeecccc
Confidence 875 56555444443
No 118
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.04 E-value=8.8e-07 Score=76.39 Aligned_cols=161 Identities=9% Similarity=-0.002 Sum_probs=102.2
Q ss_pred ceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ ++.+.++....+ |..+|..+++....... ....+..++++|+|+ .+++..
T Consensus 81 ~~v~~~~~~~-~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~----~~~~~~~~~~spdg~-~l~~g~------------- 141 (321)
T 3ow8_A 81 LGVVSVDISH-TLPIAASSSLDAHIRLWDLENGKQIKSIDA----GPVDAWTLAFSPDSQ-YLATGT------------- 141 (321)
T ss_dssp SCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEEC----CTTCCCCEEECTTSS-EEEEEC-------------
T ss_pred CCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCEEEEEeC----CCccEEEEEECCCCC-EEEEEc-------------
Confidence 3455788888 666665555444 78889988765433322 112467899999999 555543
Q ss_pred hcCCCCceEEEEeCCCCeEEEE-ecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTIL-LQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRS 204 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~-~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 204 (310)
..+.+..|+.++++.... .........++++||++.|+. ...++.|.+||...++. ...+.........+++
T Consensus 142 ----~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~las-g~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~ 214 (321)
T 3ow8_A 142 ----HVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS-GAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTF 214 (321)
T ss_dssp ----TTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEE-EETTSCEEEEETTTTEE--EEEECCCSSCCCEEEE
T ss_pred ----CCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEE-EcCCCeEEEEECCCCcE--EEEEcccCCceeEEEE
Confidence 278899999887765443 333344678999999995554 46778999999864311 1112111233578999
Q ss_pred CCCCCEEEEEecCCccceeeeeecc-ccccEEeec
Q 046018 205 NSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKL 238 (310)
Q Consensus 205 d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~ 238 (310)
+++|++.++....+. +..++ ..++....+
T Consensus 215 spd~~~l~s~s~dg~-----i~iwd~~~~~~~~~~ 244 (321)
T 3ow8_A 215 SPDSQLLVTASDDGY-----IKIYDVQHANLAGTL 244 (321)
T ss_dssp CTTSCEEEEECTTSC-----EEEEETTTCCEEEEE
T ss_pred cCCCCEEEEEcCCCe-----EEEEECCCcceeEEE
Confidence 999988777666554 44443 344444444
No 119
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.02 E-value=2.2e-06 Score=73.31 Aligned_cols=148 Identities=10% Similarity=0.023 Sum_probs=96.0
Q ss_pred ceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..+++++ +++ |+++...+.|..+|.++++........ . ....+..++++++++.++++.
T Consensus 98 ~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~-------------- 160 (337)
T 1gxr_A 98 NYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELT-S-SAPACYALAISPDSKVCFSCC-------------- 160 (337)
T ss_dssp SBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEE-C-SSSCEEEEEECTTSSEEEEEE--------------
T ss_pred CcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecc-c-CCCceEEEEECCCCCEEEEEe--------------
Confidence 4567899999 665 445544445888898877632222211 1 122467899999999555554
Q ss_pred hcCCCCceEEEEeCCCCeEEEEec-CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRS 204 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 204 (310)
.++.|..||..+++...... .......++++|+++.|+.+ ..++.|..||...+. .......+.....+++
T Consensus 161 ----~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~---~~~~~~~~~~v~~~~~ 232 (337)
T 1gxr_A 161 ----SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG-GLDNTVRSWDLREGR---QLQQHDFTSQIFSLGY 232 (337)
T ss_dssp ----TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTTE---EEEEEECSSCEEEEEE
T ss_pred ----CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEE-ecCCcEEEEECCCCc---eEeeecCCCceEEEEE
Confidence 26789999998876654433 23456889999999866555 577899999987431 1111123345678999
Q ss_pred CCCCCEEEEEecCCc
Q 046018 205 NSNGEFWVALHAKKG 219 (310)
Q Consensus 205 d~~G~l~va~~~~~~ 219 (310)
+++|++.++....+.
T Consensus 233 s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 233 CPTGEWLAVGMESSN 247 (337)
T ss_dssp CTTSSEEEEEETTSC
T ss_pred CCCCCEEEEEcCCCc
Confidence 999987776665554
No 120
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.02 E-value=1.2e-08 Score=93.88 Aligned_cols=169 Identities=13% Similarity=0.115 Sum_probs=111.6
Q ss_pred ceeceEEE-e-CCCCcEEEEEC-----------------CC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCE
Q 046018 47 GRPLGIRF-D-KKTGDLYIADA-----------------YL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGV 106 (310)
Q Consensus 47 ~~p~gl~~-d-~~~g~l~v~~~-----------------~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~ 106 (310)
..|+|+++ . ++.+.||++.. .. -+..+|.++.++. .....+ . .|..++++++|++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~--~qI~Vg--g-~pd~~~~spdGk~ 208 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA--WQVLVS--G-NLDNCDADYEGKW 208 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEE--EEEEES--S-CCCCEEECSSSSE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEE--EEEEeC--C-CccceEECCCCCE
Confidence 57999997 4 65778998852 11 2788899987643 222111 1 5889999999999
Q ss_pred EEEEeCCCchh--------------h---h-hhhhhhhcC--CCCceEEEEeCCC--CeE-EEEecCCcccceEEEecCC
Q 046018 107 IYFTDSSTSFQ--------------R---R-QFMSSILSG--DKTGRLLKYEKTT--KEV-TILLQGLAFANGVALSRDR 163 (310)
Q Consensus 107 l~v~~~~~~~~--------------~---~-~~~~~~~~~--~~~g~v~~~d~~~--~~~-~~~~~~~~~~~gi~~~~d~ 163 (310)
+|++.....-. . . +.....-.+ ..-+.|..+|..+ ++. ....+....|+|+.++|||
T Consensus 209 ~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDG 288 (595)
T 1fwx_A 209 AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDK 288 (595)
T ss_dssp EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTS
T ss_pred EEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCC
Confidence 99998543110 0 0 000000001 1124588999886 333 2233345689999999999
Q ss_pred CeEEEEecCCceEEEEEccCC------CCCcc-eeeee--CCCCCCeeEECCCCCEEEEEecCCcc
Q 046018 164 TFILIAETSNCRILRFWLHGP------NSGKQ-DVFAE--LPGFPDNVRSNSNGEFWVALHAKKGL 220 (310)
Q Consensus 164 ~~lyv~~~~~~~i~~~~~~~~------~~~~~-~~~~~--~~~~p~~i~~d~~G~l~va~~~~~~~ 220 (310)
+++|+++..++.|.+||.+.. ++... ..... ....|..+++|++|++|++..-.+++
T Consensus 289 k~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV 354 (595)
T 1fwx_A 289 KHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQV 354 (595)
T ss_dssp SEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEE
T ss_pred CEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcE
Confidence 999999999999999998732 11111 12233 33579999999999999999887774
No 121
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.01 E-value=1.3e-08 Score=89.84 Aligned_cols=124 Identities=11% Similarity=0.021 Sum_probs=87.1
Q ss_pred eEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEec------
Q 046018 98 LDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAET------ 171 (310)
Q Consensus 98 i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~------ 171 (310)
.+..|+++++|+++... ....+.|+.+|.++++..........|+ ++++|||++||++++
T Consensus 38 ~~~~pd~~~vyV~~~~~-------------~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~ 103 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAH-------------FAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIA 103 (386)
T ss_dssp CCCCCCTTEEEEEECGG-------------GCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETT
T ss_pred eccCCCCCEEEEEcCcc-------------cCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccc
Confidence 34568999999999531 0125789999999888765444455675 999999999999975
Q ss_pred ---CCceEEEEEccCCCCCcceeeeeC-------CCCCCeeEECCCCC-EEEEEec-CCccceeeeeeccccccEEeecc
Q 046018 172 ---SNCRILRFWLHGPNSGKQDVFAEL-------PGFPDNVRSNSNGE-FWVALHA-KKGLFGKLILLNSWLGKTLLKLP 239 (310)
Q Consensus 172 ---~~~~i~~~~~~~~~~~~~~~~~~~-------~~~p~~i~~d~~G~-l~va~~~-~~~~~~~~i~~~~~~g~~~~~~~ 239 (310)
.++.|.+||..+.+. ...+.-. ...|.++++++||+ +||++.. .+.+ ..++...++.+..++
T Consensus 104 ~G~~~~~VsviD~~t~~v--~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V----sVID~~t~~vv~tI~ 177 (386)
T 3sjl_D 104 RGERTDYVEVFDPVTLLP--TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV----GVVDLEGKAFKRMLD 177 (386)
T ss_dssp EEEEEEEEEEECTTTCCE--EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE----EEEETTTTEEEEEEE
T ss_pred cCCCCCEEEEEECCCCeE--EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE----EEEECCCCcEEEEEE
Confidence 256799999875321 1111111 12689999999995 8888764 4443 455677888888887
Q ss_pred ch
Q 046018 240 LS 241 (310)
Q Consensus 240 ~~ 241 (310)
.+
T Consensus 178 v~ 179 (386)
T 3sjl_D 178 VP 179 (386)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 122
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.01 E-value=1.5e-07 Score=82.50 Aligned_cols=156 Identities=10% Similarity=0.077 Sum_probs=107.2
Q ss_pred cceeceEEEeCCCCcEEEEECC-------------C---ceEEEeCCCC--eEEEEEeec--CCccccCCcceEEe-C--
Q 046018 46 CGRPLGIRFDKKTGDLYIADAY-------------L---GFQVVGPEGG--LATQLVTEA--AGQPLRFTNDLDID-E-- 102 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~-------------~---gi~~~d~~~~--~~~~~~~~~--~~~~~~~~~~i~~d-~-- 102 (310)
...+.++.+|+ .|+|||.|.+ . .|..+|..+. ++.+....+ ...+..+.++|++| .
T Consensus 86 lvsV~~v~iD~-~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 86 LTSIYQPVIDD-CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSCEEEEEECT-TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred eEEeeEEEEcC-CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 35677999999 9999999975 1 2788999998 665443332 12234578999999 2
Q ss_pred C----CCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEec-----C--------------CcccceEEE
Q 046018 103 H----KGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQ-----G--------------LAFANGVAL 159 (310)
Q Consensus 103 ~----g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----~--------------~~~~~gi~~ 159 (310)
+ +.++|++|.. .+.|.+||.++++..++.. . .....||++
T Consensus 165 ~~~c~~~~aYItD~~-----------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaL 227 (381)
T 3q6k_A 165 KGDCSETFVYITNFL-----------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITL 227 (381)
T ss_dssp TTTSCSEEEEEEETT-----------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEE
T ss_pred CCCCCccEEEEEcCC-----------------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEe
Confidence 2 4459999964 5678889988877655442 1 013568999
Q ss_pred ecC----CCeEEEEecCCceEEEEEcc---CCC-CCcceeeeeCCCCCC--eeEEC-CCCCEEEEEecCCc
Q 046018 160 SRD----RTFILIAETSNCRILRFWLH---GPN-SGKQDVFAELPGFPD--NVRSN-SNGEFWVALHAKKG 219 (310)
Q Consensus 160 ~~d----~~~lyv~~~~~~~i~~~~~~---~~~-~~~~~~~~~~~~~p~--~i~~d-~~G~l~va~~~~~~ 219 (310)
+|+ ++.||+.-..+..++++..+ ... ....+.+.+.+...+ ++++| ++|+||++....+.
T Consensus 228 sp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~a 298 (381)
T 3q6k_A 228 GDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQ 298 (381)
T ss_dssp CCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSE
T ss_pred cCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCe
Confidence 998 88999998888899999753 111 122333433321234 46786 88999999987775
No 123
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.00 E-value=1.1e-08 Score=91.58 Aligned_cols=180 Identities=9% Similarity=-0.041 Sum_probs=109.2
Q ss_pred CCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEec---------C
Q 046018 102 EHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAET---------S 172 (310)
Q Consensus 102 ~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~---------~ 172 (310)
++++++|+++.... ...+.|..+|+++.+..........| +++++||+++||++++ .
T Consensus 82 ~~~~~vyV~n~~~~-------------~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~ 147 (426)
T 3c75_H 82 PDARRVYIQDPAHF-------------AAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKR 147 (426)
T ss_dssp CCTTEEEEEECTTT-------------CSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred CCCCEEEEECCCcC-------------CCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCC
Confidence 57778999995410 00178999999998876555455678 9999999999999985 3
Q ss_pred CceEEEEEccCCCCCcceeeeeC-------CCCCCeeEECCCC-CEEEEEec-CCccceeeeeeccccccEEeeccchhh
Q 046018 173 NCRILRFWLHGPNSGKQDVFAEL-------PGFPDNVRSNSNG-EFWVALHA-KKGLFGKLILLNSWLGKTLLKLPLSFR 243 (310)
Q Consensus 173 ~~~i~~~~~~~~~~~~~~~~~~~-------~~~p~~i~~d~~G-~l~va~~~-~~~~~~~~i~~~~~~g~~~~~~~~~~~ 243 (310)
++.|.++|....+. ...+.-. ...|.++++++|| .+||++.. .+.+ ..++...++.+..++++..
T Consensus 148 ~~~VsviD~~t~~v--v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~V----sVID~~t~kvv~~I~v~g~ 221 (426)
T 3c75_H 148 TDYVEVFDPVTFLP--IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAV----GVVDLEGKTFDRMLDVPDC 221 (426)
T ss_dssp EEEEEEECTTTCCE--EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEE----EEEETTTTEEEEEEECCSE
T ss_pred CCEEEEEECCCCcE--EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeE----EEEECCCCeEEEEEEcCCc
Confidence 57899999775322 1111100 1368999999999 58888764 4443 4556677888888876431
Q ss_pred hhcccccCCCCceEEEEECCCCCEEEEEEcCCCCeec-------------cee-EEEEeCCEEEEecCCCCeEEEecc
Q 046018 244 QLHSLLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLS-------------FIS-EVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~-------------~~~-~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
. .... .....++.+.++|++...-. .++.... ... .....++++|+.+. .+.|+++|.
T Consensus 222 -~--~~~p-~g~~~~v~~~~dG~~~~V~~-~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~ 293 (426)
T 3c75_H 222 -Y--HIFP-ASPTVFYMNCRDGSLARVDF-ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADL 293 (426)
T ss_dssp -E--EEEE-EETTEEEEEETTSSEEEEEC-CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEE
T ss_pred -e--eecc-CCCcEEEEEcCCCCEEEEEC-CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEec
Confidence 0 0000 01123445556666554432 2222110 000 11123567777776 567877775
No 124
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.00 E-value=9.7e-08 Score=84.43 Aligned_cols=122 Identities=9% Similarity=-0.095 Sum_probs=81.7
Q ss_pred eEEeCCCCEEEEEeC-CCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEec-----
Q 046018 98 LDIDEHKGVIYFTDS-STSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAET----- 171 (310)
Q Consensus 98 i~~d~~g~~l~v~~~-~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~----- 171 (310)
+...++++++|+++. .... .. .|+.||+++++..........| +++++||+++||++++
T Consensus 26 ~~~~~~~~~~yv~~~~~~~~-------------~~-~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~ 90 (373)
T 2mad_H 26 EAPGADGRRSYINLPAHHSA-------------II-QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRI 90 (373)
T ss_pred ccCCCCCCEEEEeCCcccCC-------------cc-EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEecccccc
Confidence 344578888999985 3100 01 7899999988765544445567 9999999999999975
Q ss_pred ----CCceEEEEEccCCCCCcceeeeeC-------CCCCCeeEECCCCC-EEEEEec-CCccceeeeeeccccccEEee-
Q 046018 172 ----SNCRILRFWLHGPNSGKQDVFAEL-------PGFPDNVRSNSNGE-FWVALHA-KKGLFGKLILLNSWLGKTLLK- 237 (310)
Q Consensus 172 ----~~~~i~~~~~~~~~~~~~~~~~~~-------~~~p~~i~~d~~G~-l~va~~~-~~~~~~~~i~~~~~~g~~~~~- 237 (310)
.++.|.+||....+. ...+... ...|.++++++||+ ||+++.. .+.+ ..++ ..++.+..
T Consensus 91 ~rg~~~~~v~viD~~t~~~--~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v----~viD-~t~~~~~~~ 163 (373)
T 2mad_H 91 AKGKRTDYVEVFDPVTFLP--IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAV----GLVV-QGGSSDDQL 163 (373)
T ss_pred ccCCCCCeEEEEECCCCcE--EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeE----EEEE-CCCCEEeEE
Confidence 356899999864211 1111100 13588999999995 7877754 3443 3445 77788877
Q ss_pred ccch
Q 046018 238 LPLS 241 (310)
Q Consensus 238 ~~~~ 241 (310)
++.+
T Consensus 164 i~~~ 167 (373)
T 2mad_H 164 LSSP 167 (373)
T ss_pred cCCC
Confidence 7765
No 125
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.00 E-value=4e-07 Score=84.52 Aligned_cols=160 Identities=15% Similarity=0.123 Sum_probs=102.4
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..+++.+ +++..++... ..|..++.++.....+ .. ....+.+++++|+++ ..++..
T Consensus 263 ~~v~~v~~~~-d~~~l~~~~~d~~i~~w~~~~~~~~~~-~~----h~~~v~~~~~~~~~~-~l~t~~------------- 322 (577)
T 2ymu_A 263 SSVNGVAFRP-DGQTIASASDDKTVKLWNRNGQLLQTL-TG----HSSSVWGVAFSPDGQ-TIASAS------------- 322 (577)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEETTSCEEEEE-CC----CSSCEEEEEECTTSS-EEEEEE-------------
T ss_pred CCEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCcEEEEE-ec----CCCCeEEEEECCCCC-EEEEEe-------------
Confidence 4556889988 6665554444 4477778776544332 11 122467899999999 554442
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEEC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSN 205 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 205 (310)
.++.|..||..+.....+.........++++||++.|..+ ..++.|.+|+..+. ....+.........++++
T Consensus 323 ----~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~dg~v~~~~~~~~---~~~~~~~~~~~v~~~~~s 394 (577)
T 2ymu_A 323 ----DDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASA-SDDKTVKLWNRNGQ---LLQTLTGHSSSVRGVAFS 394 (577)
T ss_dssp ----TTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTCC---EEEEEECCSSCEEEEEEC
T ss_pred ----CCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEcCCCC---EEEEecCCCCCeEEEEEC
Confidence 2678999998877666554434456789999999965544 66788999986532 112222222345779999
Q ss_pred CCCCEEEEEecCCccceeeeeeccccccEEeecc
Q 046018 206 SNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLP 239 (310)
Q Consensus 206 ~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~ 239 (310)
++|++.++....+. +..++..++.+..+.
T Consensus 395 ~dg~~l~~~~~d~~-----v~~~~~~~~~~~~~~ 423 (577)
T 2ymu_A 395 PDGQTIASASDDKT-----VKLWNRNGQLLQTLT 423 (577)
T ss_dssp TTSSCEEEEETTSE-----EEEECTTCCEEEEEE
T ss_pred CCCCEEEEEeCCCE-----EEEEeCCCCEEEEec
Confidence 99987666655554 556666666665543
No 126
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.99 E-value=8.9e-08 Score=79.38 Aligned_cols=154 Identities=12% Similarity=0.019 Sum_probs=99.7
Q ss_pred CCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCC
Q 046018 94 FTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSN 173 (310)
Q Consensus 94 ~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~ 173 (310)
+..+|.++ ++. ||+++.. .....|.++|+++++......-...+-|..+++++++||++...+
T Consensus 44 ftqGL~~~-~~~-LyestG~---------------~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 44 FTEGFFYR-NGY-FYESTGL---------------NGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEEE-TTE-EEEEEEE---------------TTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS
T ss_pred ccceEEEE-CCE-EEEECCC---------------CCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC
Confidence 45788988 665 9999832 124579999999998765443333343433444566799998889
Q ss_pred ceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCC
Q 046018 174 CRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGK 253 (310)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 253 (310)
+.+++||+++.+. ...+ ..++.+.+++.|. +.||+++. ...
T Consensus 107 ~~v~v~D~~t~~~--~~ti-~~~~eG~glt~dg-~~L~~SdG-s~~---------------------------------- 147 (262)
T 3nol_A 107 GLGFVWNIRNLRQ--VRSF-NYDGEGWGLTHND-QYLIMSDG-TPV---------------------------------- 147 (262)
T ss_dssp SEEEEEETTTCCE--EEEE-ECSSCCCCEEECS-SCEEECCS-SSE----------------------------------
T ss_pred CEEEEEECccCcE--EEEE-ECCCCceEEecCC-CEEEEECC-CCe----------------------------------
Confidence 9999999874311 1122 1234556777653 57888863 332
Q ss_pred CceEEEEECCC-CCEEEEEEc-CCCCeecceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 254 PHATAIKLSEK-GEVLEVLED-CEGKTLSFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 254 ~~~~~~~~d~~-g~~~~~~~~-~~g~~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
+..+|+. .+++....- .+|.++..++.+...+|+||+..+.++.|+++|.
T Consensus 148 ----i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp 199 (262)
T 3nol_A 148 ----LRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDP 199 (262)
T ss_dssp ----EEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECT
T ss_pred ----EEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEEC
Confidence 2345654 455554432 2355555566565668899999999999999986
No 127
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.99 E-value=7.8e-07 Score=76.18 Aligned_cols=146 Identities=4% Similarity=-0.009 Sum_probs=99.2
Q ss_pred ceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +++ |+++...+.|..+|.++++....... ....+..++++|++++++++.
T Consensus 142 ~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~-------------- 202 (337)
T 1gxr_A 142 PACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQG----HTDGASCIDISNDGTKLWTGG-------------- 202 (337)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECC----CSSCEEEEEECTTSSEEEEEE--------------
T ss_pred CceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeec----ccCceEEEEECCCCCEEEEEe--------------
Confidence 4466899998 555 55555555689999988765433221 123577899999999555544
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEEC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSN 205 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 205 (310)
.++.|..||..+++.............++++|+++.++++ ..++.|..|+..... ...+.........++++
T Consensus 203 ----~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~~i~~~~~~~~~---~~~~~~~~~~v~~~~~~ 274 (337)
T 1gxr_A 203 ----LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVG-MESSNVEVLHVNKPD---KYQLHLHESCVLSLKFA 274 (337)
T ss_dssp ----TTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSSC---EEEECCCSSCEEEEEEC
T ss_pred ----cCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEE-cCCCcEEEEECCCCC---eEEEcCCccceeEEEEC
Confidence 2788999999887765544444557889999999966655 567899999987532 12222223445789999
Q ss_pred CCCCEEEEEecCCc
Q 046018 206 SNGEFWVALHAKKG 219 (310)
Q Consensus 206 ~~G~l~va~~~~~~ 219 (310)
++|++.++....+.
T Consensus 275 ~~~~~l~~~~~dg~ 288 (337)
T 1gxr_A 275 YCGKWFVSTGKDNL 288 (337)
T ss_dssp TTSSEEEEEETTSE
T ss_pred CCCCEEEEecCCCc
Confidence 99987776665554
No 128
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.99 E-value=2.3e-08 Score=89.13 Aligned_cols=147 Identities=12% Similarity=0.127 Sum_probs=93.7
Q ss_pred eEEEeCCCCcEEEEEC--------------------CCceEEEeCCCCeEEEEEeecCCccccCCcceEE--eCCCCEEE
Q 046018 51 GIRFDKKTGDLYIADA--------------------YLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDI--DEHKGVIY 108 (310)
Q Consensus 51 gl~~d~~~g~l~v~~~--------------------~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~--d~~g~~l~ 108 (310)
.+.+.+ +++++++.. .+.|..+|.++++....+.. +.....|.+|.+ +|+|+++|
T Consensus 192 d~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v--g~~g~~P~~i~f~~~Pdg~~aY 268 (462)
T 2ece_A 192 DFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL--GEENRMALELRPLHDPTKLMGF 268 (462)
T ss_dssp CEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES--CTTEEEEEEEEECSSTTCCEEE
T ss_pred eEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec--CCCCCccceeEeeECCCCCEEE
Confidence 466788 565555542 34599999988765443332 222346778877 99999999
Q ss_pred EEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe----cC-----------------CcccceEEEecCCCeEE
Q 046018 109 FTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL----QG-----------------LAFANGVALSRDRTFIL 167 (310)
Q Consensus 109 v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~----~~-----------------~~~~~gi~~~~d~~~ly 167 (310)
++..- .....++.|++|..+.++++... .. ...|.+|.+++|+++||
T Consensus 269 V~~e~------------~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY 336 (462)
T 2ece_A 269 INMVV------------SLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY 336 (462)
T ss_dssp EEEEE------------ETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred EEEee------------eccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE
Confidence 98740 00012556655444345443211 00 24578999999999999
Q ss_pred EEecCCceEEEEEccCCCCCcceeeee-----------------CCCCCCeeEECCCCC-EEEEE
Q 046018 168 IAETSNCRILRFWLHGPNSGKQDVFAE-----------------LPGFPDNVRSNSNGE-FWVAL 214 (310)
Q Consensus 168 v~~~~~~~i~~~~~~~~~~~~~~~~~~-----------------~~~~p~~i~~d~~G~-l~va~ 214 (310)
+++..++.|.+|+.... +..+.... ..+.|.++.+++||+ |||++
T Consensus 337 VSnrg~d~VavfdV~d~--~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 337 LSLWGIGEVRQYDISNP--FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEETTTTEEEEEECSST--TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEeCCCCEEEEEEecCC--CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999999999998532 11122111 123599999999995 77765
No 129
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.99 E-value=1.7e-08 Score=88.92 Aligned_cols=187 Identities=10% Similarity=-0.064 Sum_probs=112.0
Q ss_pred ccceeceEEEeCCCCcEEEEEC---------C-CceEEEeCCCCeEEEEEeecCCc---cccCCcceEEeCCCCEEEEEe
Q 046018 45 ICGRPLGIRFDKKTGDLYIADA---------Y-LGFQVVGPEGGLATQLVTEAAGQ---PLRFTNDLDIDEHKGVIYFTD 111 (310)
Q Consensus 45 ~~~~p~gl~~d~~~g~l~v~~~---------~-~gi~~~d~~~~~~~~~~~~~~~~---~~~~~~~i~~d~~g~~l~v~~ 111 (310)
....| +++++++...|||++. . +.|..+|+.+.+...-+..+.+. ....|..++++|||+++|+++
T Consensus 64 vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan 142 (368)
T 1mda_H 64 GAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFL 142 (368)
T ss_dssp ECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEE
T ss_pred CCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEc
Confidence 33567 8999996668999983 1 23999999998765443322111 124799999999999899997
Q ss_pred CC--Cc-----hhhhh-hhhh--------------hhcCCCCceEEEEeCCC----------------------------
Q 046018 112 SS--TS-----FQRRQ-FMSS--------------ILSGDKTGRLLKYEKTT---------------------------- 141 (310)
Q Consensus 112 ~~--~~-----~~~~~-~~~~--------------~~~~~~~g~v~~~d~~~---------------------------- 141 (310)
.. .. +.... .... ......++.+..++.++
T Consensus 143 ~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~ 222 (368)
T 1mda_H 143 FGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYP 222 (368)
T ss_dssp CSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTT
T ss_pred cCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccC
Confidence 43 11 11100 0000 00011222333333332
Q ss_pred ------------------CeEEEEec----------CCcccce---EEEecCCCeEEEEec---C-----CceEEEEEcc
Q 046018 142 ------------------KEVTILLQ----------GLAFANG---VALSRDRTFILIAET---S-----NCRILRFWLH 182 (310)
Q Consensus 142 ------------------~~~~~~~~----------~~~~~~g---i~~~~d~~~lyv~~~---~-----~~~i~~~~~~ 182 (310)
+..+.... ....|.| +++++|++++|++.. . .+.+.++|..
T Consensus 223 ~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~ 302 (368)
T 1mda_H 223 GMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS 302 (368)
T ss_dssp TEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESS
T ss_pred CEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECC
Confidence 11111110 1112445 899999999999855 3 3567799977
Q ss_pred CCCCCcceeeee--CCCCCCeeEECCCCC-EEEEEe-cCCccceeeeeeccccccEEeeccch
Q 046018 183 GPNSGKQDVFAE--LPGFPDNVRSNSNGE-FWVALH-AKKGLFGKLILLNSWLGKTLLKLPLS 241 (310)
Q Consensus 183 ~~~~~~~~~~~~--~~~~p~~i~~d~~G~-l~va~~-~~~~~~~~~i~~~~~~g~~~~~~~~~ 241 (310)
.. +.+.. .+..|.+|++++||+ +|++++ ..+.+ ..++..+++.+..++..
T Consensus 303 t~-----~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~V----sVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 303 VG-----QTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVL----DIYDAASDQDQSSVELD 356 (368)
T ss_dssp SC-----CEEECCEEEEEECEEEECCSSSCEEEEEETTTTEE----EEEESSSCEEEEECCCC
T ss_pred CC-----eEEEEEECCCCcceEEECCCCCEEEEEccCCCCeE----EEEECCCCcEEEEEECC
Confidence 43 22222 234699999999996 999998 56653 45556778888877653
No 130
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.99 E-value=1.4e-07 Score=83.21 Aligned_cols=132 Identities=11% Similarity=-0.061 Sum_probs=80.2
Q ss_pred ccccccccCCCCCccccccceeceEEEeCCCCcEEEEEC----------CCceEEEeCCCCeEEEEEeecCCc---cccC
Q 046018 28 TSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADA----------YLGFQVVGPEGGLATQLVTEAAGQ---PLRF 94 (310)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~----------~~gi~~~d~~~~~~~~~~~~~~~~---~~~~ 94 (310)
.+..+|..+.+..........|+ ++++++...||+++. .+.|.++|..+.+...-+..+.+. ....
T Consensus 60 ~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~ 138 (386)
T 3sjl_D 60 QQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTY 138 (386)
T ss_dssp EEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC
T ss_pred EEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCC
Confidence 34455554422111222335575 999995557999974 123899999998764433322111 1347
Q ss_pred CcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecC----Ccccce----EEEecCCCeE
Q 046018 95 TNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQG----LAFANG----VALSRDRTFI 166 (310)
Q Consensus 95 ~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~----~~~~~g----i~~~~d~~~l 166 (310)
|..++++|||+++|+++.. ..+.|..+|.++++...-... ...|.| +++++||+.+
T Consensus 139 P~~~a~spDGk~lyVan~~----------------~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~ 202 (386)
T 3sjl_D 139 PWMTSLTPDGKTLLFYQFS----------------PAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLA 202 (386)
T ss_dssp GGGEEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEE
T ss_pred CceEEEcCCCCEEEEEEcC----------------CCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEE
Confidence 9999999999999999742 256788888888766432211 112434 3777777766
Q ss_pred EEEecCCceE
Q 046018 167 LIAETSNCRI 176 (310)
Q Consensus 167 yv~~~~~~~i 176 (310)
|++....+.+
T Consensus 203 ~v~~~~~g~v 212 (386)
T 3sjl_D 203 KVAFGTEGTP 212 (386)
T ss_dssp EEECCSSSCC
T ss_pred EEECCCCCeE
Confidence 6654333454
No 131
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.96 E-value=2.4e-07 Score=80.95 Aligned_cols=149 Identities=8% Similarity=0.024 Sum_probs=94.4
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +|+..++.... -|..+|.++++....... ....++.+++.+++..++++...
T Consensus 128 ~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~----h~~~V~~~~~~~~~~~~l~s~s~------------ 190 (344)
T 4gqb_B 128 DIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRA----HAAQVTCVAASPHKDSVFLSCSE------------ 190 (344)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECC----CSSCEEEEEECSSCTTEEEEEET------------
T ss_pred CCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcC----cCCceEEEEecCCCCCceeeecc------------
Confidence 4566899999 77665555544 488889998875433221 12356789999988536665432
Q ss_pred hcCCCCceEEEEeCCCCeEEEEec---CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCee
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQ---GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNV 202 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~---~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i 202 (310)
++.|..||..+++...... .......++++|++..++++...++.|.+||...++. ...+..-......+
T Consensus 191 -----D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~--~~~~~~h~~~v~~v 263 (344)
T 4gqb_B 191 -----DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC--VLSSAVHSQCVTGL 263 (344)
T ss_dssp -----TSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C--CEEEECCSSCEEEE
T ss_pred -----ccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE--EEEEcCCCCCEEEE
Confidence 7789999988776443221 1223578999997666777767789999999874321 12222222334678
Q ss_pred EECCCC-CEEEEEecCCc
Q 046018 203 RSNSNG-EFWVALHAKKG 219 (310)
Q Consensus 203 ~~d~~G-~l~va~~~~~~ 219 (310)
++.++| ++.++....+.
T Consensus 264 ~fsp~g~~~lasgs~D~~ 281 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDCS 281 (344)
T ss_dssp EECSSSSCCEEEEETTSC
T ss_pred EEccCCCeEEEEEeCCCe
Confidence 999998 45555544444
No 132
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.95 E-value=1.1e-06 Score=74.91 Aligned_cols=161 Identities=11% Similarity=0.090 Sum_probs=100.9
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +++++++... +.|..+|.++++....... ....+..++++|+++ ++++..
T Consensus 66 ~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~-~l~s~~------------- 126 (312)
T 4ery_A 66 LGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKG----HSNYVFCCNFNPQSN-LIVSGS------------- 126 (312)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSS-EEEEEE-------------
T ss_pred CceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcC----CCCCEEEEEEcCCCC-EEEEEe-------------
Confidence 4566899999 6665555444 4488889887765433322 112467889999999 555442
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee-CCCCCCeeE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE-LPGFPDNVR 203 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~ 203 (310)
.++.|..||..+++....... ......++++|+++.++ +...++.|..||...+.. ...+.. .......++
T Consensus 127 ----~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~ 199 (312)
T 4ery_A 127 ----FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV-SSSYDGLCRIWDTASGQC--LKTLIDDDNPPVSFVK 199 (312)
T ss_dssp ----TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTCCE--EEEECCSSCCCEEEEE
T ss_pred ----CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEECCCCce--eeEEeccCCCceEEEE
Confidence 277899999987765443332 33457899999998554 446778999999864311 111211 112235689
Q ss_pred ECCCCCEEEEEecCCccceeeeeecc-ccccEEeec
Q 046018 204 SNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKL 238 (310)
Q Consensus 204 ~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~ 238 (310)
++++|++.++....+. +..++ ..++.+..+
T Consensus 200 ~~~~~~~l~~~~~d~~-----i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 200 FSPNGKYILAATLDNT-----LKLWDYSKGKCLKTY 230 (312)
T ss_dssp ECTTSSEEEEEETTTE-----EEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEcCCCe-----EEEEECCCCcEEEEE
Confidence 9999987777666554 34433 445554444
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.94 E-value=8.2e-08 Score=86.10 Aligned_cols=146 Identities=12% Similarity=0.070 Sum_probs=95.6
Q ss_pred ceeceEEEeCCCCc-EEEEECCC---ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYL---GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~---gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~ 122 (310)
.....+++++ +|+ |+++.... .|+.+|.++++...+... ......++++|+|++|+++...
T Consensus 223 ~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~-----~~~~~~~~~spdg~~l~~~s~~--------- 287 (415)
T 2hqs_A 223 RHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG-----RSNNTEPTWFPDSQNLAFTSDQ--------- 287 (415)
T ss_dssp SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEECCCC-----SSCEEEEEECTTSSEEEEEECT---------
T ss_pred CcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCEEeCcCC-----CCcccceEECCCCCEEEEEECC---------
Confidence 4456899999 666 55454432 389999988876544221 1245678999999977776532
Q ss_pred hhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecC--CceEEEEEccCCCCCcceeeeeCCCCCC
Q 046018 123 SSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETS--NCRILRFWLHGPNSGKQDVFAELPGFPD 200 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~p~ 200 (310)
.....|+.+|.++++.+.+.........++++|||+.|+++... ...|++++.+++. ...+... ....
T Consensus 288 ------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~---~~~l~~~-~~~~ 357 (415)
T 2hqs_A 288 ------AGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG---VQVLSST-FLDE 357 (415)
T ss_dssp ------TSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC---EEECCCS-SSCE
T ss_pred ------CCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC---EEEecCC-CCcC
Confidence 12347999999887766544333445689999999988877554 3589999987542 2222221 2456
Q ss_pred eeEECCCCCE-EEEEecC
Q 046018 201 NVRSNSNGEF-WVALHAK 217 (310)
Q Consensus 201 ~i~~d~~G~l-~va~~~~ 217 (310)
.++++++|+. +++...+
T Consensus 358 ~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 358 TPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp EEEECTTSSEEEEEEEET
T ss_pred CeEEcCCCCEEEEEEcCC
Confidence 7899999974 4444443
No 134
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.94 E-value=3.5e-08 Score=89.50 Aligned_cols=109 Identities=19% Similarity=0.276 Sum_probs=76.4
Q ss_pred ccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe---c------CCcccceEEEecC
Q 046018 92 LRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL---Q------GLAFANGVALSRD 162 (310)
Q Consensus 92 ~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~---~------~~~~~~gi~~~~d 162 (310)
+..|.+|+++|+|+ |||++.. .++|++++..+++.+.+. . ....+.||+++||
T Consensus 26 l~~P~~~a~~pdG~-l~V~e~~-----------------gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 26 LNKPHALLWGPDNQ-IWLTERA-----------------TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp CSSEEEEEECTTSC-EEEEETT-----------------TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCCceEEEEcCCCc-EEEEEcC-----------------CCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 45799999999999 9999842 347999987666665433 1 1233459999997
Q ss_pred ---CCeEEEEecC------------CceEEEEEccCC--CCCccee-eeeCC----CCCCeeEECCCCCEEEEEecCC
Q 046018 163 ---RTFILIAETS------------NCRILRFWLHGP--NSGKQDV-FAELP----GFPDNVRSNSNGEFWVALHAKK 218 (310)
Q Consensus 163 ---~~~lyv~~~~------------~~~i~~~~~~~~--~~~~~~~-~~~~~----~~p~~i~~d~~G~l~va~~~~~ 218 (310)
++.||++.+. ..+|++++.+.. .....+. +...+ ..+.+|++++||.|||+.....
T Consensus 88 f~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~ 165 (454)
T 1cru_A 88 FKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQG 165 (454)
T ss_dssp TTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTT
T ss_pred cCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCC
Confidence 7779999864 468999987642 1222222 32233 2467899999999999987654
No 135
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.93 E-value=2.9e-08 Score=85.90 Aligned_cols=77 Identities=13% Similarity=0.006 Sum_probs=49.2
Q ss_pred ccceEEEec-CCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCC-EEEEEecCCccceeeeeec-c
Q 046018 153 FANGVALSR-DRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLN-S 229 (310)
Q Consensus 153 ~~~gi~~~~-d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~-~ 229 (310)
.+.+++++| |++.+|++ .+.|++||+.+++ .......+..|.+++++++|+ ||++ ...+. +..+ .
T Consensus 256 ~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~-----v~v~d~ 323 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRK---LIKAANLDHTYYCVAFDKKGDKLYLG-GTFND-----LAVFNP 323 (349)
T ss_dssp CEEEEEECSSCTTEEEEE---ESEEEEEETTTTE---EEEEEECSSCCCEEEECSSSSCEEEE-SBSSE-----EEEEET
T ss_pred cceeeEecCCCCCEEEEE---cCeEEEEECccCe---EEEEEcCCCCccceEECCCCCEEEEe-cCCCe-----EEEEec
Confidence 456788889 99988887 6799999987431 111122345688999999984 7764 33333 3333 3
Q ss_pred ccccEEeeccch
Q 046018 230 WLGKTLLKLPLS 241 (310)
Q Consensus 230 ~~g~~~~~~~~~ 241 (310)
..++.+..++.+
T Consensus 324 ~~~~~~~~~~~~ 335 (349)
T 1jmx_B 324 DTLEKVKNIKLP 335 (349)
T ss_dssp TTTEEEEEEECS
T ss_pred cccceeeeeecC
Confidence 455666665544
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.92 E-value=1.5e-07 Score=78.99 Aligned_cols=147 Identities=10% Similarity=0.023 Sum_probs=93.6
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCC-CeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEG-GLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~-~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..+++++ +|+.++......|+.+|.++ ++...+.. ......+.+++++|+|++|+++...
T Consensus 42 ~~v~~~~~sp-dg~~l~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~spdg~~l~~~~~~------------ 105 (297)
T 2ojh_A 42 ELFEAPNWSP-DGKYLLLNSEGLLYRLSLAGDPSPEKVDT---GFATICNNDHGISPDGALYAISDKV------------ 105 (297)
T ss_dssp SCCEEEEECT-TSSEEEEEETTEEEEEESSSCCSCEECCC---TTCCCBCSCCEECTTSSEEEEEECT------------
T ss_pred cceEeeEECC-CCCEEEEEcCCeEEEEeCCCCCCceEecc---ccccccccceEECCCCCEEEEEEeC------------
Confidence 4566899999 77755555555699999988 76554432 1122357889999999966665522
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCce--EEEEEccCCCCCcceeeeeCCCCCCeeE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCR--ILRFWLHGPNSGKQDVFAELPGFPDNVR 203 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~p~~i~ 203 (310)
......|+.++.+++..+.+.. ......++++||++.|+++....+. |+.++..++ ....+...+..+..++
T Consensus 106 --~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~ 179 (297)
T 2ojh_A 106 --EFGKSAIYLLPSTGGTPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG---VETRLTHGEGRNDGPD 179 (297)
T ss_dssp --TTSSCEEEEEETTCCCCEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC---CEEECCCSSSCEEEEE
T ss_pred --CCCcceEEEEECCCCceEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCC---cceEcccCCCccccce
Confidence 1125679999987776554432 3346788999999988766555564 444444432 2222222334457789
Q ss_pred ECCCCC-EEEEEe
Q 046018 204 SNSNGE-FWVALH 215 (310)
Q Consensus 204 ~d~~G~-l~va~~ 215 (310)
++++|+ |+++..
T Consensus 180 ~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 180 YSPDGRWIYFNSS 192 (297)
T ss_dssp ECTTSSEEEEEEC
T ss_pred ECCCCCEEEEEec
Confidence 999997 444443
No 137
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.92 E-value=5.6e-07 Score=83.82 Aligned_cols=184 Identities=9% Similarity=0.054 Sum_probs=111.2
Q ss_pred EeCCCCC-eEEEEEecccccccc--CCCCCccccccceeceEEEe----CCCCcEEEEECCC-ceEEEeCCCCeEEEEEe
Q 046018 14 WQGDELG-WTEFAVTTSQRKECV--RPFAPDIEHICGRPLGIRFD----KKTGDLYIADAYL-GFQVVGPEGGLATQLVT 85 (310)
Q Consensus 14 ~~~~~~~-W~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~gl~~d----~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~ 85 (310)
+.++... ++......+..+|.. +.+..........|.+++++ ++...||++.... .|..+|..+.+....+.
T Consensus 204 ~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 204 LSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp ECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 3443333 554444456666663 21111112234678999999 5455789888764 48889988876544332
Q ss_pred ecC---Cc----cccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEE--EecCCcccce
Q 046018 86 EAA---GQ----PLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTI--LLQGLAFANG 156 (310)
Q Consensus 86 ~~~---~~----~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~--~~~~~~~~~g 156 (310)
... +. +...+..|+.++++..++++.. .+|.|+.+|..+.+... .......+++
T Consensus 284 ~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~-----------------~~g~v~~vd~~~~~~~~v~~i~~~~~~~d 346 (567)
T 1qks_A 284 TRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK-----------------ETGKILLVDYTDLNNLKTTEISAERFLHD 346 (567)
T ss_dssp CCEECTTTCCEESCCCEEEEEECSSSSEEEEEET-----------------TTTEEEEEETTCSSEEEEEEEECCSSEEE
T ss_pred ccccccccccccCCCceEEEEEcCCCCEEEEEec-----------------CCCeEEEEecCCCccceeeeeeccccccC
Confidence 110 00 0113456788888774555542 37889999986543211 1233456889
Q ss_pred EEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC-CCCC---CeeE-ECCC-CCEEEEEecC
Q 046018 157 VALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL-PGFP---DNVR-SNSN-GEFWVALHAK 217 (310)
Q Consensus 157 i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~p---~~i~-~d~~-G~l~va~~~~ 217 (310)
+.|+||++++|+++..+++|.++|...++. ...... ...| .++. ++++ |.+|++..-+
T Consensus 347 ~~~~pdgr~~~va~~~sn~V~ViD~~t~kl---~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g 410 (567)
T 1qks_A 347 GGLDGSHRYFITAANARNKLVVIDTKEGKL---VAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG 410 (567)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTTTEE---EEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS
T ss_pred ceECCCCCEEEEEeCCCCeEEEEECCCCcE---EEEEeccCcCCCCccceeeECCCCCcEEEeCCCC
Confidence 999999999999998999999999875422 111122 2223 3443 5776 6899877644
No 138
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.91 E-value=4.3e-07 Score=81.40 Aligned_cols=144 Identities=10% Similarity=0.105 Sum_probs=95.2
Q ss_pred ceeceEEEeCCCCc-EEEEECCC---ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYL---GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~---gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~ 122 (310)
.....+++++ +|+ |..+.... .|+.+|.++++...+... . ..+..++++|+|++|+++...
T Consensus 179 ~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-~----~~~~~~~~spdg~~la~~~~~--------- 243 (415)
T 2hqs_A 179 QPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQVASF-P----RHNGAPAFSPDGSKLAFALSK--------- 243 (415)
T ss_dssp SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-S----SCEEEEEECTTSSEEEEEECT---------
T ss_pred CcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-C----CcccCEEEcCCCCEEEEEEec---------
Confidence 4566899999 665 55554443 488999998876544321 1 246789999999967756532
Q ss_pred hhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCC--ceEEEEEccCCCCCcceeeeeCCCCCC
Q 046018 123 SSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSN--CRILRFWLHGPNSGKQDVFAELPGFPD 200 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~p~ 200 (310)
.....|+.||.++++...+.........++|+||++.|+++.... ..|++++.+++. ...+........
T Consensus 244 ------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~---~~~l~~~~~~~~ 314 (415)
T 2hqs_A 244 ------TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA---PQRITWEGSQNQ 314 (415)
T ss_dssp ------TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC---CEECCCSSSEEE
T ss_pred ------CCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC---EEEEecCCCccc
Confidence 124569999998887766554444567899999999887765433 389999987542 222221223345
Q ss_pred eeEECCCCCEEEEE
Q 046018 201 NVRSNSNGEFWVAL 214 (310)
Q Consensus 201 ~i~~d~~G~l~va~ 214 (310)
.++++++|+..+..
T Consensus 315 ~~~~spdG~~l~~~ 328 (415)
T 2hqs_A 315 DADVSSDGKFMVMV 328 (415)
T ss_dssp EEEECTTSSEEEEE
T ss_pred CeEECCCCCEEEEE
Confidence 68999999754443
No 139
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.91 E-value=3.6e-07 Score=79.78 Aligned_cols=166 Identities=10% Similarity=0.043 Sum_probs=101.6
Q ss_pred eeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhc
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILS 127 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~ 127 (310)
....+++.+ ++.|..+...+.|..+|.++++...........-...++.|+++|+|+ ..++..
T Consensus 84 ~v~~~~~s~-d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs--------------- 146 (344)
T 4gqb_B 84 GVADLTWVG-ERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGS--------------- 146 (344)
T ss_dssp CEEEEEEET-TTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEE---------------
T ss_pred CEEEEEEeC-CCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-EEEEEe---------------
Confidence 356789998 788887766655777888776532221110000112578899999999 554442
Q ss_pred CCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeee-eC-CCCCCeeEE
Q 046018 128 GDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFA-EL-PGFPDNVRS 204 (310)
Q Consensus 128 ~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~-~~-~~~p~~i~~ 204 (310)
.++.|..||..+++....... ......+++++++..++++.+.++.|.+||...++. ...+. .. ...+..+++
T Consensus 147 --~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~ 222 (344)
T 4gqb_B 147 --KDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLPTSLAW 222 (344)
T ss_dssp --TTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC--EEECC----CCCEEEEEE
T ss_pred --CCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce--eeeeecceeeccceeeee
Confidence 277899999998876554433 334578999999876777777889999999874321 11121 11 123456788
Q ss_pred CCC-CCEEEEEecCCccceeeeeecc-ccccEEeecc
Q 046018 205 NSN-GEFWVALHAKKGLFGKLILLNS-WLGKTLLKLP 239 (310)
Q Consensus 205 d~~-G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~ 239 (310)
.++ ++++++....+. |..++ ..++.+..+.
T Consensus 223 ~p~~~~~l~sg~~dg~-----v~~wd~~~~~~~~~~~ 254 (344)
T 4gqb_B 223 HPQQSEVFVFGDENGT-----VSLVDTKSTSCVLSSA 254 (344)
T ss_dssp CSSCTTEEEEEETTSE-----EEEEESCC--CCEEEE
T ss_pred cCCCCcceEEeccCCc-----EEEEECCCCcEEEEEc
Confidence 875 467666555554 33333 3455444443
No 140
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.90 E-value=3.3e-07 Score=81.74 Aligned_cols=186 Identities=10% Similarity=0.041 Sum_probs=115.3
Q ss_pred ceeceEEEeCCCCcEEEEECCC-------ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-------GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRR 119 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-------gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~ 119 (310)
..|+++...+ +| |||+..+. +|..+|.++.++....... ..+...+.++-+.|+++.+++++.+. +...
T Consensus 138 s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~-~~~~~~~Yd~~~~p~~~~mvsS~wg~-p~~~ 213 (462)
T 2ece_A 138 SRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEID-RGDQYLAYDFWWNLPNEVLVSSEWAV-PNTI 213 (462)
T ss_dssp EEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSB-CTTCCCCCCEEEETTTTEEEECBCCC-HHHH
T ss_pred CcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccC-CCCccccceEEECCCCCEEEEccCcC-cccc
Confidence 4899999999 77 99987653 5999999988764433321 12334567899999999555554221 0000
Q ss_pred --hhhhhhhcCCCCceEEEEeCCCCeEEEEecC---CcccceEEE--ecCCCeEEEEec-----CCceEEEEEccCCCCC
Q 046018 120 --QFMSSILSGDKTGRLLKYEKTTKEVTILLQG---LAFANGVAL--SRDRTFILIAET-----SNCRILRFWLHGPNSG 187 (310)
Q Consensus 120 --~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~---~~~~~gi~~--~~d~~~lyv~~~-----~~~~i~~~~~~~~~~~ 187 (310)
.+....+......+|..||.++++....... ...|.+|.+ +|+++++|++.. .++.|++|..+++...
T Consensus 214 ~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~ 293 (462)
T 2ece_A 214 EDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWN 293 (462)
T ss_dssp TTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEE
T ss_pred ccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCcee
Confidence 0111111112467899999987765432222 245778877 999999999988 8889988776643111
Q ss_pred cceee--e------eC----------CCCCCeeEECCCCC-EEEEEecCCccceeeeeecc----ccccEEeeccch
Q 046018 188 KQDVF--A------EL----------PGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLNS----WLGKTLLKLPLS 241 (310)
Q Consensus 188 ~~~~~--~------~~----------~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~----~~g~~~~~~~~~ 241 (310)
..+.+ . .+ +..|..|.+++||+ |||+++..+. |..+. ...+++..+++.
T Consensus 294 ~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~-----VavfdV~d~~~~~lv~~I~tG 365 (462)
T 2ece_A 294 AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE-----VRQYDISNPFKPVLTGKVKLG 365 (462)
T ss_dssp EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE-----EEEEECSSTTSCEEEEEEECB
T ss_pred EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE-----EEEEEecCCCCcEEEEEEEeC
Confidence 11111 0 01 24678999999995 8888877665 33332 234556666543
No 141
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.89 E-value=1.5e-07 Score=78.08 Aligned_cols=148 Identities=13% Similarity=0.090 Sum_probs=98.3
Q ss_pred CCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEecC
Q 046018 94 FTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAETS 172 (310)
Q Consensus 94 ~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~ 172 (310)
+..+|.++. ++ ||+++.. .|.|.++|+++++..... ....+..|+++ ++++||++...
T Consensus 56 ftqGL~~~~-~~-Ly~stG~-----------------~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~--~g~~Ly~ltw~ 114 (268)
T 3nok_A 56 FTQGLVFHQ-GH-FFESTGH-----------------QGTLRQLSLESAQPVWMERLGNIFAEGLAS--DGERLYQLTWT 114 (268)
T ss_dssp CEEEEEEET-TE-EEEEETT-----------------TTEEEECCSSCSSCSEEEECTTCCEEEEEE--CSSCEEEEESS
T ss_pred ccceEEEEC-CE-EEEEcCC-----------------CCEEEEEECCCCcEEeEECCCCcceeEEEE--eCCEEEEEEcc
Confidence 456888873 44 9999854 567999999998764432 22223355655 55679999888
Q ss_pred CceEEEEEccCCCCCcceeeee--CCCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEeeccchhhhhccccc
Q 046018 173 NCRILRFWLHGPNSGKQDVFAE--LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLV 250 (310)
Q Consensus 173 ~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~ 250 (310)
++.+++||+++. +.... .++.+.+++.|. +.||+++ ....
T Consensus 115 ~~~v~V~D~~Tl-----~~~~ti~~~~eGwGLt~Dg-~~L~vSd-Gs~~------------------------------- 156 (268)
T 3nok_A 115 EGLLFTWSGMPP-----QRERTTRYSGEGWGLCYWN-GKLVRSD-GGTM------------------------------- 156 (268)
T ss_dssp SCEEEEEETTTT-----EEEEEEECSSCCCCEEEET-TEEEEEC-SSSE-------------------------------
T ss_pred CCEEEEEECCcC-----cEEEEEeCCCceeEEecCC-CEEEEEC-CCCE-------------------------------
Confidence 999999998742 22222 234457787763 5788886 3332
Q ss_pred CCCCceEEEEECCC-CCEEEEEEc-CCCCeecceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 251 GGKPHATAIKLSEK-GEVLEVLED-CEGKTLSFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 251 ~~~~~~~~~~~d~~-g~~~~~~~~-~~g~~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
+..+|+. .+++..+.- .++.++..++.+...+|+||+..+.++.|.++|.
T Consensus 157 -------l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 157 -------LTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp -------EEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECT
T ss_pred -------EEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeC
Confidence 2345654 345544432 2455555666666678999999999999999986
No 142
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.87 E-value=5.1e-06 Score=71.91 Aligned_cols=167 Identities=10% Similarity=0.078 Sum_probs=98.8
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +++++++... +.|..+|.++++....... ...+..++++++++.++++....
T Consensus 75 ~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~----------- 137 (369)
T 3zwl_B 75 GTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNGQCVATWKS-----PVPVKRVEFSPCGNYFLAILDNV----------- 137 (369)
T ss_dssp SCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEEC-----SSCEEEEEECTTSSEEEEEECCB-----------
T ss_pred CcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEeec-----CCCeEEEEEccCCCEEEEecCCc-----------
Confidence 4567899998 6665554444 4488889888775443331 12477899999999555554210
Q ss_pred hcCCCCceEEEEeCCCCeE----E--------EEecC--CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCccee
Q 046018 126 LSGDKTGRLLKYEKTTKEV----T--------ILLQG--LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDV 191 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~----~--------~~~~~--~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~ 191 (310)
....+.|..||..++.. . .+... ......++++|+++.|+++ ..++.|.+||..... .....
T Consensus 138 --~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~-~~~~~ 213 (369)
T 3zwl_B 138 --MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG-HKDGKISKYDVSNNY-EYVDS 213 (369)
T ss_dssp --TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE-ETTSEEEEEETTTTT-EEEEE
T ss_pred --cCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE-cCCCEEEEEECCCCc-EeEEE
Confidence 01136777777543311 1 11111 1156789999999966655 567899999987421 11112
Q ss_pred eeeCCCCCCeeEECCCCCEEEEEecCCccceeeeeec-cccccEEeecc
Q 046018 192 FAELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLN-SWLGKTLLKLP 239 (310)
Q Consensus 192 ~~~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~-~~~g~~~~~~~ 239 (310)
+.........++++++|++.++....+. +..+ ...++.+..+.
T Consensus 214 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 214 IDLHEKSISDMQFSPDLTYFITSSRDTN-----SFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSE-----EEEEETTTCCEEEEEE
T ss_pred EecCCCceeEEEECCCCCEEEEecCCce-----EEEEECCCCceeeeec
Confidence 2222234577899999987776665554 3333 34555554443
No 143
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.87 E-value=9.9e-07 Score=79.31 Aligned_cols=177 Identities=12% Similarity=0.045 Sum_probs=106.8
Q ss_pred EEEEeccccccccCCCCCccc---cccceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcce
Q 046018 23 EFAVTTSQRKECVRPFAPDIE---HICGRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDL 98 (310)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~---~~~~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i 98 (310)
+...+.+..||.......... ........|+++|.+++++++....+ |..+|.+++....+... .........+
T Consensus 138 Gs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--~~~~~~~~~~ 215 (435)
T 4e54_B 138 GSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASS--DTINIWFCSL 215 (435)
T ss_dssp EETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECC--SSCSCCCCCE
T ss_pred EeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEecc--CCCCccEEEE
Confidence 333445555665442212221 12245678999975666666655555 77889988766544332 1122245789
Q ss_pred EEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEE
Q 046018 99 DIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILR 178 (310)
Q Consensus 99 ~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~ 178 (310)
+++++++ ++++.. .+|.|..||.+++....+.........++++|++..++++...++.|.+
T Consensus 216 ~~~~~~~-~l~~g~-----------------~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~i 277 (435)
T 4e54_B 216 DVSASSR-MVVTGD-----------------NVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKI 277 (435)
T ss_dssp EEETTTT-EEEEEC-----------------SSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCE
T ss_pred EECCCCC-EEEEEe-----------------CCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeE
Confidence 9999999 555543 3788999998765443332223345789999998877777677889999
Q ss_pred EEccCCCCC-cceeeeeCCCCCCeeEECCCCCEEEEEecCCc
Q 046018 179 FWLHGPNSG-KQDVFAELPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 179 ~~~~~~~~~-~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
||+...... .......-......++++++|++.++....+.
T Consensus 278 wd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~ 319 (435)
T 4e54_B 278 WDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE 319 (435)
T ss_dssp EETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC
T ss_pred EecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE
Confidence 998743211 11111111122356788999987776665554
No 144
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.85 E-value=4.5e-06 Score=73.31 Aligned_cols=153 Identities=10% Similarity=0.068 Sum_probs=98.4
Q ss_pred ceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++.++. |+.+...+.|..+|.++.....+... . .....+..++++|+++.++.+.
T Consensus 119 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l~~~~-------------- 182 (383)
T 3ei3_B 119 DAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKT-D-SWDYWYCCVDVSVSRQMLATGD-------------- 182 (383)
T ss_dssp CBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECC-C-CSSCCEEEEEEETTTTEEEEEE--------------
T ss_pred CceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEecc-C-CCCCCeEEEEECCCCCEEEEEC--------------
Confidence 56678999883334 44444444588889987655444321 1 1123477899999999444443
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCC-CcceeeeeCCCCCCeeEE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNS-GKQDVFAELPGFPDNVRS 204 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~p~~i~~ 204 (310)
.++.|..||........+.........++++|+++.++++...++.|.+||...... ...............+++
T Consensus 183 ----~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 258 (383)
T 3ei3_B 183 ----STGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYF 258 (383)
T ss_dssp ----TTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEE
T ss_pred ----CCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEE
Confidence 378899999965555555444455789999999985555557788999999874221 111111122345578999
Q ss_pred CC-CCCEEEEEecCCc
Q 046018 205 NS-NGEFWVALHAKKG 219 (310)
Q Consensus 205 d~-~G~l~va~~~~~~ 219 (310)
++ +|++.++....+.
T Consensus 259 s~~~~~~l~~~~~d~~ 274 (383)
T 3ei3_B 259 NPTDSTKLLTTDQRNE 274 (383)
T ss_dssp CTTTSCEEEEEESSSE
T ss_pred cCCCCCEEEEEcCCCc
Confidence 99 9987776665554
No 145
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.83 E-value=3.5e-06 Score=73.29 Aligned_cols=167 Identities=8% Similarity=-0.021 Sum_probs=99.6
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..+++++ +++++++... +.|..+|.++++........ .....+..+++++++++++++.
T Consensus 53 ~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~-------------- 115 (372)
T 1k8k_C 53 GQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL--RINRAARCVRWAPNEKKFAVGS-------------- 115 (372)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSCEEEEEEETTEEEEEEECC--CCSSCEEEEEECTTSSEEEEEE--------------
T ss_pred CcccEEEEeC-CCCEEEEEcCCCeEEEEECCCCeeeeeEEee--cCCCceeEEEECCCCCEEEEEe--------------
Confidence 4567899999 6665554444 45888888777644332221 1123577899999999555554
Q ss_pred hcCCCCceEEEEeCCCCe----EEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCC-------------CC
Q 046018 126 LSGDKTGRLLKYEKTTKE----VTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPN-------------SG 187 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~----~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~-------------~~ 187 (310)
.++.|..||.+++. ....... ......++++|+++.++. ...++.|..||..... ..
T Consensus 116 ----~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 190 (372)
T 1k8k_C 116 ----GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA-GSCDFKCRIFSAYIKEVEERPAPTPWGSKMP 190 (372)
T ss_dssp ----TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE-EETTSCEEEEECCCTTTSCCCCCBTTBSCCC
T ss_pred ----CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE-EcCCCCEEEEEcccccccccccccccccccc
Confidence 25667777765543 2222222 344679999999985554 4667899999964210 00
Q ss_pred cceeeeeC---CCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeeccc
Q 046018 188 KQDVFAEL---PGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPL 240 (310)
Q Consensus 188 ~~~~~~~~---~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~ 240 (310)
........ ......++++++|++.++....+. +..++ ..++.+..+..
T Consensus 191 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 191 FGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST-----VCLADADKKMAVATLAS 242 (372)
T ss_dssp TTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE-----EEEEEGGGTTEEEEEEC
T ss_pred hhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE-----EEEEECCCCceeEEEcc
Confidence 11222222 234567899999987776665554 44443 45666555543
No 146
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.83 E-value=8.7e-06 Score=70.53 Aligned_cols=148 Identities=8% Similarity=0.046 Sum_probs=92.6
Q ss_pred ceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCe--EEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGL--ATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~--~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~ 123 (310)
.....+++++ ++++.++....+ |..++..+.. ....... .+ ....+..+++.+++. ++.+.
T Consensus 98 ~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~-l~s~s------------ 161 (340)
T 1got_B 98 SWVMTCAYAP-SGNYVACGGLDNICSIYNLKTREGNVRVSREL-AG-HTGYLSCCRFLDDNQ-IVTSS------------ 161 (340)
T ss_dssp SCEEEEEECT-TSSEEEEEETTCEEEEEETTTCSBSCEEEEEE-EC-CSSCEEEEEEEETTE-EEEEE------------
T ss_pred ccEEEEEECC-CCCEEEEEeCCCeEEEEECccCCCcceeEEEe-cC-CCccEEEEEECCCCc-EEEEE------------
Confidence 3456788999 666555544444 6777776542 1111111 11 112456677888876 66554
Q ss_pred hhhcCCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCee
Q 046018 124 SILSGDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNV 202 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i 202 (310)
.++.|..||..+++....... ......++++|+++ ++++...++.|..||...+. ....+.........+
T Consensus 162 ------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~--~~~~~~~h~~~v~~v 232 (340)
T 1got_B 162 ------GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGM--CRQTFTGHESDINAI 232 (340)
T ss_dssp ------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCS--EEEEECCCSSCEEEE
T ss_pred ------CCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCe--eEEEEcCCcCCEEEE
Confidence 377899999988876544333 33467899999998 55566778999999986431 112222222345678
Q ss_pred EECCCCCEEEEEecCCc
Q 046018 203 RSNSNGEFWVALHAKKG 219 (310)
Q Consensus 203 ~~d~~G~l~va~~~~~~ 219 (310)
+++++|+++++....+.
T Consensus 233 ~~~p~~~~l~s~s~d~~ 249 (340)
T 1got_B 233 CFFPNGNAFATGSDDAT 249 (340)
T ss_dssp EECTTSSEEEEEETTSC
T ss_pred EEcCCCCEEEEEcCCCc
Confidence 99999998877766665
No 147
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.81 E-value=1.5e-07 Score=82.82 Aligned_cols=138 Identities=10% Similarity=0.026 Sum_probs=84.4
Q ss_pred cEEEEECCCceEEEeCCCCeEEEEEee--cC------CccccCCcceEEeCCCCEEEEEeCCC--chhhhhhhhhhhcCC
Q 046018 60 DLYIADAYLGFQVVGPEGGLATQLVTE--AA------GQPLRFTNDLDIDEHKGVIYFTDSST--SFQRRQFMSSILSGD 129 (310)
Q Consensus 60 ~l~v~~~~~gi~~~d~~~~~~~~~~~~--~~------~~~~~~~~~i~~d~~g~~l~v~~~~~--~~~~~~~~~~~~~~~ 129 (310)
.+|+....+.|+.+|..+.....+... .. +.....+..++++++++++|++...+ .+. ...
T Consensus 213 ~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~---------~~~ 283 (361)
T 2oiz_A 213 KAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGT---------HKF 283 (361)
T ss_dssp EEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTC---------TTC
T ss_pred EEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccc---------ccC
Confidence 445554444477777765443222110 00 00012234589999988899986310 000 011
Q ss_pred CCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCC
Q 046018 130 KTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGE 209 (310)
Q Consensus 130 ~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 209 (310)
..+.|+.||.++++......... |.+|+++|||++||+++. +.|.+||..+..+.....+......|.+++++|+|+
T Consensus 284 ~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 284 PAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 24579999999887655444444 999999999999998864 899999977431111122222346799999999985
No 148
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.80 E-value=2.3e-06 Score=75.23 Aligned_cols=209 Identities=14% Similarity=0.098 Sum_probs=115.6
Q ss_pred CCcEEEEECCCceEEEeCCCCeEEEEEeecCCcc--ccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEE
Q 046018 58 TGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQP--LRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLL 135 (310)
Q Consensus 58 ~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~--~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~ 135 (310)
++.||++.....|+.+|+++++..-.... .... .......+++ ++. +|++. ..+.|+
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~~~-~~~-v~~g~------------------~~g~l~ 201 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNL-DMPSLSLRGESAPTTA-FGA-AVVGG------------------DNGRVS 201 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC-CC-----CCCCCCEEE-TTE-EEECC------------------TTTEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeC-CCCceeecCCCCcEEE-CCE-EEEEc------------------CCCEEE
Confidence 57899987777799999988875322221 1111 0111223333 565 88875 267899
Q ss_pred EEeCCCCeEEEEecCCccc-------------ceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCee
Q 046018 136 KYEKTTKEVTILLQGLAFA-------------NGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNV 202 (310)
Q Consensus 136 ~~d~~~~~~~~~~~~~~~~-------------~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i 202 (310)
.+|+++|+........ .| ...++. + ..+|++ +.++.|+.+|+..++ ..+......+..+
T Consensus 202 ~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~p~~~-~-~~v~~~-~~~g~l~~~d~~tG~----~~w~~~~~~~~~~ 273 (376)
T 3q7m_A 202 AVLMEQGQMIWQQRIS-QATGSTEIDRLSDVDTTPVVV-N-GVVFAL-AYNGNLTALDLRSGQ----IMWKRELGSVNDF 273 (376)
T ss_dssp EEETTTCCEEEEEECC-C-----------CCCCCCEEE-T-TEEEEE-CTTSCEEEEETTTCC----EEEEECCCCEEEE
T ss_pred EEECCCCcEEEEEecc-cCCCCcccccccccCCCcEEE-C-CEEEEE-ecCcEEEEEECCCCc----EEeeccCCCCCCc
Confidence 9999888765432211 11 111222 3 458887 456899999986432 1222211223445
Q ss_pred EECCCCCEEEEEecCCccceeeeee-ccccccEEeecc-chhhhhc-------ccccCCCCceEEEEECC-CCCEEEEEE
Q 046018 203 RSNSNGEFWVALHAKKGLFGKLILL-NSWLGKTLLKLP-LSFRQLH-------SLLVGGKPHATAIKLSE-KGEVLEVLE 272 (310)
Q Consensus 203 ~~d~~G~l~va~~~~~~~~~~~i~~-~~~~g~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~d~-~g~~~~~~~ 272 (310)
.++ ++++|+++..+. +.. +..+|+.+...+ .+..... .++++ .....+.++|+ +|+++..+.
T Consensus 274 ~~~-~~~l~~~~~~g~------l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~-~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 274 IVD-GNRIYLVDQNDR------VMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVG-DSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp EEE-TTEEEEEETTCC------EEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEE-CTTSEEEEEETTTCCEEEEEE
T ss_pred eEE-CCEEEEEcCCCe------EEEEECCCCcEEEeecccCCCcccCCEEECCEEEEE-eCCCeEEEEECCCCcEEEEEe
Confidence 554 678999987654 444 446787766554 1111111 11222 22335667774 477666554
Q ss_pred cCCCCeecceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 273 DCEGKTLSFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 273 ~~~g~~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
...+. ..+.....+++||+++. +..|+.+++
T Consensus 346 ~~~~~---~~~~~~~~~~~l~v~~~-~G~l~~~~~ 376 (376)
T 3q7m_A 346 VDSSG---FQTEPVAADGKLLIQAK-DGTVYSITR 376 (376)
T ss_dssp CCTTC---BCSCCEEETTEEEEEBT-TSCEEEEEC
T ss_pred cCCCc---ceeCCEEECCEEEEEeC-CCEEEEEeC
Confidence 42222 12333456899999997 567888763
No 149
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.79 E-value=7.3e-06 Score=71.24 Aligned_cols=151 Identities=8% Similarity=-0.067 Sum_probs=95.4
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +++++++... +.|..+|.++++...+.... + ....+..++++|++++|+.+.
T Consensus 9 ~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~l~~~~-------------- 71 (372)
T 1k8k_C 9 EPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELK-E-HNGQVTGVDWAPDSNRIVTCG-------------- 71 (372)
T ss_dssp SCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEE-C-CSSCEEEEEEETTTTEEEEEE--------------
T ss_pred CCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeec-C-CCCcccEEEEeCCCCEEEEEc--------------
Confidence 4566899999 7776655544 44888888877532222211 1 122578899999999444443
Q ss_pred hcCCCCceEEEEeCCCCeEEEEe---cCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCc-ceeeee-CCCCCC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILL---QGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGK-QDVFAE-LPGFPD 200 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~---~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~-~~~~~~-~~~~p~ 200 (310)
.++.|..||.++++..... ........++++|+++.|+++ ..++.|..|+.+...... ...+.. ......
T Consensus 72 ----~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~ 146 (372)
T 1k8k_C 72 ----TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVG-SGSRVISICYFEQENDWWVCKHIKKPIRSTVL 146 (372)
T ss_dssp ----TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEE-ETTSSEEEEEEETTTTEEEEEEECTTCCSCEE
T ss_pred ----CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEE-eCCCEEEEEEecCCCcceeeeeeecccCCCee
Confidence 2678999998777644322 223346789999999866655 567899999887542110 111111 123456
Q ss_pred eeEECCCCCEEEEEecCCc
Q 046018 201 NVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 201 ~i~~d~~G~l~va~~~~~~ 219 (310)
.+++.++|+++++....+.
T Consensus 147 ~~~~~~~~~~l~~~~~dg~ 165 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCDFK 165 (372)
T ss_dssp EEEECTTSSEEEEEETTSC
T ss_pred EEEEcCCCCEEEEEcCCCC
Confidence 7899999987777665554
No 150
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.78 E-value=3.5e-06 Score=74.81 Aligned_cols=224 Identities=14% Similarity=0.090 Sum_probs=120.5
Q ss_pred EEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCC
Q 046018 52 IRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDK 130 (310)
Q Consensus 52 l~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~ 130 (310)
.++.+ +++++++... +.|..+|.++++....... ....+.+++++|+++.|+.+. .
T Consensus 103 ~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s------------------~ 159 (420)
T 3vl1_A 103 DTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQA----HVSEITKLKFFPSGEALISSS------------------Q 159 (420)
T ss_dssp EEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTS----SSSCEEEEEECTTSSEEEEEE------------------T
T ss_pred EEEec-CCCEEEEEECCCCEEEEeCCCcceeeeccc----ccCccEEEEECCCCCEEEEEe------------------C
Confidence 35666 6655554444 4588889988765433211 123578899999999444443 2
Q ss_pred CceEEEEeCCCCeEEE-EecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC--------------
Q 046018 131 TGRLLKYEKTTKEVTI-LLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL-------------- 195 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~-~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~-------------- 195 (310)
++.|..||..+++... +.........++++|+++.|+ +...++.|.+||...+.. ...+...
T Consensus 160 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~ 236 (420)
T 3vl1_A 160 DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL-SASLDGTIRLWECGTGTT--IHTFNRKENPHDGVNSIALFV 236 (420)
T ss_dssp TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE-EEETTSCEEEEETTTTEE--EEEECBTTBTTCCEEEEEEEE
T ss_pred CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE-EEcCCCcEEEeECCCCce--eEEeecCCCCCCCccEEEEec
Confidence 7789999987765433 332334467899999998555 446778999999874311 1111100
Q ss_pred ----------CCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeeccch-hhhhcccccCCCCceEEEEECC
Q 046018 196 ----------PGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPLS-FRQLHSLLVGGKPHATAIKLSE 263 (310)
Q Consensus 196 ----------~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 263 (310)
......++++++|++.++....+. +..++ ..++....+... ...+.++.+.......++.-..
T Consensus 237 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~ 311 (420)
T 3vl1_A 237 GTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV-----ITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE 311 (420)
T ss_dssp CCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC-----EEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET
T ss_pred CCcceeeecccCcccceEEcCCCCEEEEEcCCCe-----EEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC
Confidence 122345778899977776665554 34433 445544443321 1222333333222212222222
Q ss_pred CCCEEEEEEcCCCCe-e--------cceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 264 KGEVLEVLEDCEGKT-L--------SFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 264 ~g~~~~~~~~~~g~~-~--------~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
+| .+..+....+.. . ..++.+...++++++....+..|.+++.
T Consensus 312 dg-~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 312 NG-MLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp TS-EEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEE
T ss_pred CC-eEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEec
Confidence 22 223333222210 0 1234444556766555554666777664
No 151
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.78 E-value=1.7e-06 Score=78.02 Aligned_cols=108 Identities=14% Similarity=0.171 Sum_probs=69.5
Q ss_pred CCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCC--CCeEEEEe---cCCcccceEEEecCCCeEEE
Q 046018 94 FTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKT--TKEVTILL---QGLAFANGVALSRDRTFILI 168 (310)
Q Consensus 94 ~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~--~~~~~~~~---~~~~~~~gi~~~~d~~~lyv 168 (310)
.+.+++++|+|++|+++.. .++.|..||.. +++..... .....+..++++|+++.|++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~-----------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 166 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACAD-----------------SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVII 166 (450)
T ss_dssp CEEEEEECTTSSEEEEEEG-----------------GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred ceEEEEEcCCCCEEEEEEC-----------------CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEE
Confidence 4678999999995555542 26788888876 55443322 22345689999999997776
Q ss_pred EecCCceEEEEEccCCCCCc--ceeeeeCCCCCCeeEECCC---CCEEEEEecCCc
Q 046018 169 AETSNCRILRFWLHGPNSGK--QDVFAELPGFPDNVRSNSN---GEFWVALHAKKG 219 (310)
Q Consensus 169 ~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~p~~i~~d~~---G~l~va~~~~~~ 219 (310)
+ ...+.|+.|+........ ...+..-......++++++ |++.++....+.
T Consensus 167 ~-~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~ 221 (450)
T 2vdu_B 167 A-DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEH 221 (450)
T ss_dssp E-ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSC
T ss_pred E-eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCc
Confidence 6 457899999986432211 1122222234567889998 866666655554
No 152
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.78 E-value=2.5e-06 Score=74.03 Aligned_cols=146 Identities=10% Similarity=0.030 Sum_probs=96.5
Q ss_pred eeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhc
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILS 127 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~ 127 (310)
....+.+.+ ++.|..+...+.|..+|.++++....... ....+..++++|+++ ++++...
T Consensus 145 ~v~~~~~~~-~~~l~s~s~d~~i~~wd~~~~~~~~~~~~----h~~~v~~~~~~~~~~-~l~sg~~-------------- 204 (340)
T 1got_B 145 YLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTG----HTGDVMSLSLAPDTR-LFVSGAC-------------- 204 (340)
T ss_dssp CEEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECC----CSSCEEEEEECTTSS-EEEEEET--------------
T ss_pred cEEEEEECC-CCcEEEEECCCcEEEEECCCCcEEEEEcC----CCCceEEEEECCCCC-EEEEEeC--------------
Confidence 445677777 77777776666688889988865433221 112467899999999 6665532
Q ss_pred CCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC--CCCCCeeEE
Q 046018 128 GDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL--PGFPDNVRS 204 (310)
Q Consensus 128 ~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~p~~i~~ 204 (310)
++.|..||..++........ ......++++|+++. +++...++.|..||..... ....+... ......+++
T Consensus 205 ---d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~ 278 (340)
T 1got_B 205 ---DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA-FATGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSF 278 (340)
T ss_dssp ---TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEE
T ss_pred ---CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCE-EEEEcCCCcEEEEECCCCc--EEEEEccCCcccceEEEEE
Confidence 78899999887765543332 344689999999985 4455678899999986431 11111111 112356899
Q ss_pred CCCCCEEEEEecCCc
Q 046018 205 NSNGEFWVALHAKKG 219 (310)
Q Consensus 205 d~~G~l~va~~~~~~ 219 (310)
+++|++.++....+.
T Consensus 279 s~~g~~l~~g~~d~~ 293 (340)
T 1got_B 279 SKSGRLLLAGYDDFN 293 (340)
T ss_dssp CTTSSEEEEEETTSE
T ss_pred CCCCCEEEEECCCCe
Confidence 999998887776664
No 153
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.76 E-value=1.4e-05 Score=67.98 Aligned_cols=161 Identities=9% Similarity=0.045 Sum_probs=93.7
Q ss_pred eeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
....+++.+ ++++.++... +.|..+|.++++....... ....++.++++|+++ ++++.+
T Consensus 57 ~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~-~l~sgs-------------- 116 (304)
T 2ynn_A 57 PVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEA----HPDYIRSIAVHPTKP-YVLSGS-------------- 116 (304)
T ss_dssp CEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSS-EEEEEE--------------
T ss_pred cEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcEEEEEeC----CCCcEEEEEEcCCCC-EEEEEC--------------
Confidence 345678888 5655544444 4588889988765433222 112578899999999 555543
Q ss_pred cCCCCceEEEEeCCCC-eEEEEecC-CcccceEEEecC-CCeEEEEecCCceEEEEEccCCCCCcceeeee-CCCCCCee
Q 046018 127 SGDKTGRLLKYEKTTK-EVTILLQG-LAFANGVALSRD-RTFILIAETSNCRILRFWLHGPNSGKQDVFAE-LPGFPDNV 202 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~-~~~~~~~~-~~~~~gi~~~~d-~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i 202 (310)
.++.|..||..++ ........ ......++++|+ +. ++++...++.|..||...... ...+.. .......+
T Consensus 117 ---~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~l~sgs~D~~v~iwd~~~~~~--~~~~~~~~~~~v~~~ 190 (304)
T 2ynn_A 117 ---DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNYV 190 (304)
T ss_dssp ---TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT-EEEEEETTSEEEEEETTCSSC--SEEEECCCTTCEEEE
T ss_pred ---CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC-EEEEEeCCCeEEEEECCCCCc--cceeccCCcCcEEEE
Confidence 2788999998765 33332322 334578999994 55 566667889999999864311 111111 11112334
Q ss_pred EEC--CCCCEEEEEecCCccceeeeeecc-ccccEEeecc
Q 046018 203 RSN--SNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLP 239 (310)
Q Consensus 203 ~~d--~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~ 239 (310)
.+. +++.+.++....+. +..++ ..++.+..+.
T Consensus 191 ~~~~~~~~~~l~s~s~D~~-----i~iWd~~~~~~~~~~~ 225 (304)
T 2ynn_A 191 DYYPLPDKPYMITASDDLT-----IKIWDYQTKSCVATLE 225 (304)
T ss_dssp EECCSTTCCEEEEEETTSE-----EEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCEEEEEcCCCe-----EEEEeCCCCccceeeC
Confidence 454 36666666655554 34433 3455554443
No 154
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.76 E-value=2.2e-05 Score=69.26 Aligned_cols=145 Identities=9% Similarity=0.050 Sum_probs=91.3
Q ss_pred ceeceEEEeCCCCcEEEEE-CCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIAD-AYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~-~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +++++++. ..+.|..+|.++.....+ .. ....+..++++|++++|+.+.
T Consensus 109 ~~v~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~-~~----~~~~v~~~~~~~~~~~l~~~~-------------- 168 (425)
T 1r5m_A 109 NQVTCLAWSH-DGNSIVTGVENGELRLWNKTGALLNVL-NF----HRAPIVSVKWNKDGTHIISMD-------------- 168 (425)
T ss_dssp BCEEEEEECT-TSSEEEEEETTSCEEEEETTSCEEEEE-CC----CCSCEEEEEECTTSSEEEEEE--------------
T ss_pred CceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeec-cC----CCccEEEEEECCCCCEEEEEe--------------
Confidence 3667899999 66554444 444588888655443322 21 123577899999999555554
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCc-c---------------cceEEEecCCCeEEEEecCCceEEEEEccCCCCCcc
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLA-F---------------ANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQ 189 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~-~---------------~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~ 189 (310)
.++.|..||..+++......... . ...+++++++. +++ ...++.|..|+...... .
T Consensus 169 ----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~i~~~d~~~~~~--~ 240 (425)
T 1r5m_A 169 ----VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVI-PGPKGAIFVYQITEKTP--T 240 (425)
T ss_dssp ----TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEE-ECGGGCEEEEETTCSSC--S
T ss_pred ----cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEE-EcCCCeEEEEEcCCCce--e
Confidence 26789999998776654332221 2 67889998864 444 46778999999875321 1
Q ss_pred eeeeeCCCCCCeeEECCCCCEEEEEecCCc
Q 046018 190 DVFAELPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 190 ~~~~~~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
..+.........++++++|+++++....+.
T Consensus 241 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 270 (425)
T 1r5m_A 241 GKLIGHHGPISVLEFNDTNKLLLSASDDGT 270 (425)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred eeeccCCCceEEEEECCCCCEEEEEcCCCE
Confidence 222222233467899999987776665554
No 155
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.74 E-value=2.4e-05 Score=67.11 Aligned_cols=162 Identities=11% Similarity=0.111 Sum_probs=99.0
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +|+..++.... .|..+|.++++....... ....+..++++++++ ++++...
T Consensus 66 ~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~----h~~~v~~~~~~~~~~-~l~s~s~------------ 127 (319)
T 3frx_A 66 HIVQDCTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVG----HKSDVMSVDIDKKAS-MIISGSR------------ 127 (319)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEEC----CSSCEEEEEECTTSC-EEEEEET------------
T ss_pred ccEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEcc----CCCcEEEEEEcCCCC-EEEEEeC------------
Confidence 3456788998 67655554444 488889988875433221 112467899999999 5555432
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCC-----eEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRT-----FILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPD 200 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~-----~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~ 200 (310)
++.|..||..+.....+.........+++.|... .++++...++.|..||...... ...+..-.....
T Consensus 128 -----D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~h~~~v~ 200 (319)
T 3frx_A 128 -----DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI--EADFIGHNSNIN 200 (319)
T ss_dssp -----TSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE--EEEECCCCSCEE
T ss_pred -----CCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh--heeecCCCCcEE
Confidence 7789999987655554443333456778877432 2455667788999999864211 111111123346
Q ss_pred eeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeec
Q 046018 201 NVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKL 238 (310)
Q Consensus 201 ~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~ 238 (310)
.++++++|++.++....+. +..++ ..++.+..+
T Consensus 201 ~~~~sp~g~~l~s~~~dg~-----i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 201 TLTASPDGTLIASAGKDGE-----IMLWNLAAKKAMYTL 234 (319)
T ss_dssp EEEECTTSSEEEEEETTCE-----EEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCe-----EEEEECCCCcEEEEe
Confidence 7899999988777766654 44443 445554444
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.74 E-value=2.9e-07 Score=86.00 Aligned_cols=144 Identities=9% Similarity=-0.033 Sum_probs=93.3
Q ss_pred eEEEeCC-CCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCC
Q 046018 51 GIRFDKK-TGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGD 129 (310)
Q Consensus 51 gl~~d~~-~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~ 129 (310)
.++++++ ++.+|+....+++..+|.++++.+++.... . .+++++|||++|+++... ..
T Consensus 114 ~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~------~-~~~~~spDG~~la~~~~~--------------~~ 172 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP------G-FGFVSDIRGDLIAGLGFF--------------GG 172 (582)
T ss_dssp EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES------S-CEEEEEEETTEEEEEEEE--------------ET
T ss_pred eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC------C-ceEEECCCCCEEEEEEEc--------------CC
Confidence 3455552 234555555566667788888876665431 1 789999999955544421 01
Q ss_pred CCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCc--eEEEEEccCCCCCcceeeeeCCCCCCeeE----
Q 046018 130 KTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNC--RILRFWLHGPNSGKQDVFAELPGFPDNVR---- 203 (310)
Q Consensus 130 ~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~p~~i~---- 203 (310)
....|+.+|.++++.+.+.........++|+|||+.|+.+ ...+ .|+++|.+++.. ..+......+.+++
T Consensus 173 ~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~-~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 173 GRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGL-ETAREARLVTVDPRDGSV---EDLELPSKDFSSYRPTAI 248 (582)
T ss_dssp TEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEE-ECSSCEEEEEECTTTCCE---EECCCSCSHHHHHCCSEE
T ss_pred CCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEc-cCCCeeEEEEEcCCCCcE---EEccCCCcChhhhhhccc
Confidence 1256999999888887765544556889999999988844 3445 899999875422 22222222234455
Q ss_pred ----ECCCCCEEEEEecCCc
Q 046018 204 ----SNSNGEFWVALHAKKG 219 (310)
Q Consensus 204 ----~d~~G~l~va~~~~~~ 219 (310)
+++||.++++....+.
T Consensus 249 ~~~~~spdg~~~~~~~~~g~ 268 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGR 268 (582)
T ss_dssp EEEEECTTSCEEEEEEETTE
T ss_pred cceeEcCCCcEEEEEEcCCc
Confidence 9999988887776554
No 157
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.74 E-value=6.1e-06 Score=73.61 Aligned_cols=113 Identities=12% Similarity=0.101 Sum_probs=76.7
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ ++++.++.... .|..+|.++++...... + ....+..++++|+|+ .+++..
T Consensus 151 ~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~---~-h~~~V~~v~~~p~~~-~l~s~s------------- 211 (410)
T 1vyh_C 151 DSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMH---G-HDHNVSSVSIMPNGD-HIVSAS------------- 211 (410)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCC---C-CSSCEEEEEECSSSS-EEEEEE-------------
T ss_pred CcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEc---C-CCCCEEEEEEeCCCC-EEEEEe-------------
Confidence 4567899998 67666555544 47788888766432211 1 123577899999999 555443
Q ss_pred hcCCCCceEEEEeCCCCeEEE-EecCCcccceEEEecCCCeEEEEecCCceEEEEEccC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTI-LLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHG 183 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~-~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~ 183 (310)
.++.|..||..++.... +.........+++++|++ ++++...++.|.+|+...
T Consensus 212 ----~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 212 ----RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp ----TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT
T ss_pred ----CCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCeEEEEECCC
Confidence 27889999998876543 322233457889999998 555557788999999864
No 158
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.73 E-value=1.7e-06 Score=76.61 Aligned_cols=180 Identities=9% Similarity=0.017 Sum_probs=107.3
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCe------EEEEEeecCCccccCCcceEEeCC-CCEEEEEeCCCchhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGL------ATQLVTEAAGQPLRFTNDLDIDEH-KGVIYFTDSSTSFQR 118 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~------~~~~~~~~~~~~~~~~~~i~~d~~-g~~l~v~~~~~~~~~ 118 (310)
.....+++++++++++++.... .|..+|..+++ ........ ......+..++++++ ++ ++++...
T Consensus 114 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~-~l~~~~~----- 186 (416)
T 2pm9_A 114 SSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQS-MSSVDEVISLAWNQSLAH-VFASAGS----- 186 (416)
T ss_dssp SCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCS-CCSSCCCCEEEECSSCTT-EEEEESS-----
T ss_pred cceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccc-cCCCCCeeEEEeCCCCCc-EEEEEcC-----
Confidence 4566899998426666555554 48888887764 11111110 112235789999999 66 6665432
Q ss_pred hhhhhhhhcCCCCceEEEEeCCCCeEEEEecC-------CcccceEEEecCCCeEEEEecCCc---eEEEEEccCCCCCc
Q 046018 119 RQFMSSILSGDKTGRLLKYEKTTKEVTILLQG-------LAFANGVALSRDRTFILIAETSNC---RILRFWLHGPNSGK 188 (310)
Q Consensus 119 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-------~~~~~gi~~~~d~~~lyv~~~~~~---~i~~~~~~~~~~~~ 188 (310)
++.|..||..+++....... ......++++|++..++++....+ .|.+||...... .
T Consensus 187 ------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-~ 253 (416)
T 2pm9_A 187 ------------SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-P 253 (416)
T ss_dssp ------------SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-C
T ss_pred ------------CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-C
Confidence 77899999988766544332 344678999999854666556666 999999875311 1
Q ss_pred ceeee-eCCCCCCeeEECC-CCCEEEEEecCCccceeeeeecc-ccccEEeeccchhhhhcccccC
Q 046018 189 QDVFA-ELPGFPDNVRSNS-NGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPLSFRQLHSLLVG 251 (310)
Q Consensus 189 ~~~~~-~~~~~p~~i~~d~-~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~~~~~~~~~~~~ 251 (310)
...+. ........+++++ +|++.++....+. +..++ ..++.+..+......+..+.+.
T Consensus 254 ~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~-----v~~wd~~~~~~~~~~~~~~~~v~~~~~s 314 (416)
T 2pm9_A 254 LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT-----VLLWNPESAEQLSQFPARGNWCFKTKFA 314 (416)
T ss_dssp SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE-----EEEECSSSCCEEEEEECSSSCCCCEEEC
T ss_pred cEEeecCccCceeEEEeCCCCCCeEEEEeCCCC-----EEEeeCCCCccceeecCCCCceEEEEEC
Confidence 12222 1223456789998 7877776665554 44443 4566665554333333334343
No 159
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.73 E-value=3.3e-06 Score=74.88 Aligned_cols=153 Identities=7% Similarity=-0.017 Sum_probs=100.3
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..+++++ ++.++++... +.|..+|.++++....... ....+..++++|++..++++..+
T Consensus 218 ~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~p~~~~ll~~~~g------------ 280 (401)
T 4aez_A 218 SEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTN----HNAAVKAVAWCPWQSNLLATGGG------------ 280 (401)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECC----CSSCCCEEEECTTSTTEEEEECC------------
T ss_pred CCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecC----CcceEEEEEECCCCCCEEEEecC------------
Confidence 4567899999 6665554444 4588889987764332221 12357889999987647766431
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEE-ecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIA-ETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRS 204 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 204 (310)
..++.|..||..+++.............++++|+++.++++ ...++.|.+|+...+.......+....+....+++
T Consensus 281 ---s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~ 357 (401)
T 4aez_A 281 ---TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSAL 357 (401)
T ss_dssp ---TTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEE
T ss_pred ---CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEE
Confidence 13788999999887765544445567899999999966665 33678999999875321111111122244678899
Q ss_pred CCCCCEEEEEecCCc
Q 046018 205 NSNGEFWVALHAKKG 219 (310)
Q Consensus 205 d~~G~l~va~~~~~~ 219 (310)
+++|.+.++....+.
T Consensus 358 s~dg~~l~s~~~dg~ 372 (401)
T 4aez_A 358 SPDGRILSTAASDEN 372 (401)
T ss_dssp CTTSSEEEEECTTSE
T ss_pred CCCCCEEEEEeCCCc
Confidence 999987776665554
No 160
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.72 E-value=1.1e-06 Score=84.20 Aligned_cols=97 Identities=13% Similarity=0.112 Sum_probs=67.8
Q ss_pred eceEEEeCCCCc-EEEEECCCceEEEeCCCC---eEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 49 PLGIRFDKKTGD-LYIADAYLGFQVVGPEGG---LATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 49 p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~---~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
...+++++ +|+ |+++.. ..|+.+|.+++ ..+.+... ...+..++++|||++|.++.
T Consensus 111 v~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~-----~~~~~~~~~SPDG~~la~~~------------- 170 (741)
T 2ecf_A 111 IVDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHG-----EGFATDAKLSPKGGFVSFIR------------- 170 (741)
T ss_dssp SCCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCS-----SSCEEEEEECTTSSEEEEEE-------------
T ss_pred cceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccC-----CcccccccCCCCCCEEEEEe-------------
Confidence 56899999 665 555544 56899999887 54433211 12467899999999666665
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEecCCcc-----------------cceEEEecCCCeEEEEec
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILLQGLAF-----------------ANGVALSRDRTFILIAET 171 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~~-----------------~~gi~~~~d~~~lyv~~~ 171 (310)
.+.|+.||.++++...+...... +.+++|+|||+.|+++..
T Consensus 171 ------~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 171 ------GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp ------TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred ------CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 45799999988877665433221 477999999998887744
No 161
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.71 E-value=2.3e-05 Score=67.68 Aligned_cols=149 Identities=11% Similarity=0.074 Sum_probs=96.9
Q ss_pred ceeceEEEeCCCCcEEEEEC-CCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADA-YLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~-~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +++++++.. .+.|..+|..+++....... ....+.++++++++++|+.+.
T Consensus 33 ~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~-------------- 93 (369)
T 3zwl_B 33 RPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDG----HTGTIWSIDVDCFTKYCVTGS-------------- 93 (369)
T ss_dssp SCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSEEEEEE--------------
T ss_pred ceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhh----cCCcEEEEEEcCCCCEEEEEe--------------
Confidence 5567899999 666555444 44588889887765433221 122567899999999444443
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCC-----ceEEEEEccCCCCC-cc--------ee
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSN-----CRILRFWLHGPNSG-KQ--------DV 191 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~-----~~i~~~~~~~~~~~-~~--------~~ 191 (310)
.++.|..||..+++.............++++|+++.++++ ..+ +.|..|+....... .. ..
T Consensus 94 ----~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~ 168 (369)
T 3zwl_B 94 ----ADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAI-LDNVMKNPGSINIYEIERDSATHELTKVSEEPIHK 168 (369)
T ss_dssp ----TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEE-ECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEE
T ss_pred ----CCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEe-cCCccCCCCEEEEEEecCCccceeecccccceeee
Confidence 2788999999887766544445567899999999966665 444 89999998743211 11 11
Q ss_pred eeeCCC--CCCeeEECCCCCEEEEEecCCc
Q 046018 192 FAELPG--FPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 192 ~~~~~~--~p~~i~~d~~G~l~va~~~~~~ 219 (310)
+....+ ....++++++|++.++....+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 198 (369)
T 3zwl_B 169 IITHEGLDAATVAGWSTKGKYIIAGHKDGK 198 (369)
T ss_dssp EECCTTCCCEEEEEECGGGCEEEEEETTSE
T ss_pred ccCCcCccceeEEEEcCCCCEEEEEcCCCE
Confidence 111111 4567889999987776655554
No 162
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.71 E-value=5.4e-06 Score=79.04 Aligned_cols=140 Identities=11% Similarity=0.017 Sum_probs=93.1
Q ss_pred eeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhc
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILS 127 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~ 127 (310)
.+..+++++ ++.+.++.. ..|+.+|..+++...+... ...+.+++++|||++|.++.
T Consensus 83 ~v~~~~~sp-d~~~~~~~~-~~i~~~d~~~~~~~~l~~~-----~~~~~~~~~SpdG~~la~~~---------------- 139 (706)
T 2z3z_A 83 PSFRTLDAG-RGLVVLFTQ-GGLVGFDMLARKVTYLFDT-----NEETASLDFSPVGDRVAYVR---------------- 139 (706)
T ss_dssp CCEEEEETT-TTEEEEEET-TEEEEEETTTTEEEEEECC-----TTCCTTCEECTTSSEEEEEE----------------
T ss_pred CceeEEECC-CCeEEEEEC-CEEEEEECCCCceEEccCC-----cccccCCcCCCCCCEEEEEE----------------
Confidence 467899999 576666643 5699999998876555322 12467899999999666653
Q ss_pred CCCCceEEEEeCCC-----CeEEEEecCCcc---------------cceEEEecCCCeEEEEec----------------
Q 046018 128 GDKTGRLLKYEKTT-----KEVTILLQGLAF---------------ANGVALSRDRTFILIAET---------------- 171 (310)
Q Consensus 128 ~~~~g~v~~~d~~~-----~~~~~~~~~~~~---------------~~gi~~~~d~~~lyv~~~---------------- 171 (310)
.+.|+.|+.++ ++...+...... +.+++|+|||++|+++..
T Consensus 140 ---~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~ 216 (706)
T 2z3z_A 140 ---NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPL 216 (706)
T ss_dssp ---TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSS
T ss_pred ---CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCC
Confidence 57899999887 665544332222 478999999998877641
Q ss_pred ----------------CCceEEEEEccCCCCCcceeeee---CCCCCCeeEECCCCC-EEEEEec
Q 046018 172 ----------------SNCRILRFWLHGPNSGKQDVFAE---LPGFPDNVRSNSNGE-FWVALHA 216 (310)
Q Consensus 172 ----------------~~~~i~~~~~~~~~~~~~~~~~~---~~~~p~~i~~d~~G~-l~va~~~ 216 (310)
....|+++|.+++. ...+.. ....+..+++++||+ |+++...
T Consensus 217 ~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~---~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 278 (706)
T 2z3z_A 217 EAESKPLYYPMAGTPSHHVTVGIYHLATGK---TVYLQTGEPKEKFLTNLSWSPDENILYVAEVN 278 (706)
T ss_dssp SCEEEEECCCBTTSCCCEEEEEEEETTTTE---EEECCCCSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred CCceEEeeCCCCCCCCCeeEEEEEECCCCc---eEeeccCCCCceeEeeEEEECCCCEEEEEEeC
Confidence 33679999887542 111111 112345789999997 5555443
No 163
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.69 E-value=4e-05 Score=67.18 Aligned_cols=184 Identities=10% Similarity=0.012 Sum_probs=105.5
Q ss_pred eeceEEEeCCCCc-EEEEECC-Cc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 48 RPLGIRFDKKTGD-LYIADAY-LG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 48 ~p~gl~~d~~~g~-l~v~~~~-~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
.+..++++| +|+ |.++... .+ |..+|+++++....... ...+.+|+++|+|+ +.++..
T Consensus 135 ~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~~-----~~~V~~v~fspdg~-~l~s~s------------ 195 (365)
T 4h5i_A 135 YTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEKFEIET-----RGEVKDLHFSTDGK-VVAYIT------------ 195 (365)
T ss_dssp CEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEEEEEEC-----SSCCCEEEECTTSS-EEEEEC------------
T ss_pred CEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEEEEeCC-----CCceEEEEEccCCc-eEEecc------------
Confidence 355789999 666 4555543 44 77789998875433321 12478999999999 555542
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEecC---CcccceEEEecCCCeEEEEecCCc---eEEEEEccCCCCCcc--eeeeeCC
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILLQG---LAFANGVALSRDRTFILIAETSNC---RILRFWLHGPNSGKQ--DVFAELP 196 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~~~---~~~~~gi~~~~d~~~lyv~~~~~~---~i~~~~~~~~~~~~~--~~~~~~~ 196 (310)
.+.+.+|+..+++....... ......++++||++.++.+..... .++.++......... ..+....
T Consensus 196 ------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 269 (365)
T 4h5i_A 196 ------GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRF 269 (365)
T ss_dssp ------SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSC
T ss_pred ------ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCC
Confidence 44577777666655432211 223568999999986666543322 566666553211100 1111112
Q ss_pred CCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeeccchhhhhcccccCCCCceEEEEECCCCCEEEEE
Q 046018 197 GFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPLSFRQLHSLLVGGKPHATAIKLSEKGEVLEVL 271 (310)
Q Consensus 197 ~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~ 271 (310)
.....++++++|++.++....+. |..++ .+++.+..+.. +......-++|+|+|+.+..-
T Consensus 270 ~~V~~~~~Spdg~~lasgs~D~~-----V~iwd~~~~~~~~~~~~----------gH~~~V~~v~fSpdg~~laS~ 330 (365)
T 4h5i_A 270 KGITSMDVDMKGELAVLASNDNS-----IALVKLKDLSMSKIFKQ----------AHSFAITEVTISPDSTYVASV 330 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSC-----EEEEETTTTEEEEEETT----------SSSSCEEEEEECTTSCEEEEE
T ss_pred CCeEeEEECCCCCceEEEcCCCE-----EEEEECCCCcEEEEecC----------cccCCEEEEEECCCCCEEEEE
Confidence 23467899999998776666554 44443 45666554311 112223345677777666544
No 164
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.69 E-value=5.4e-05 Score=66.92 Aligned_cols=145 Identities=12% Similarity=0.006 Sum_probs=95.0
Q ss_pred eceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhc
Q 046018 49 PLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILS 127 (310)
Q Consensus 49 p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~ 127 (310)
...+++++ +|+++++... +.|..+|.++++....... ....+.+++++|+++ ..++..
T Consensus 126 v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~p~~~-~l~s~s--------------- 184 (393)
T 1erj_A 126 IRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQG----HEQDIYSLDYFPSGD-KLVSGS--------------- 184 (393)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECC----CSSCEEEEEECTTSS-EEEEEE---------------
T ss_pred EEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcc----CCCCEEEEEEcCCCC-EEEEec---------------
Confidence 56799999 7765555444 4488889988875433321 122467899999999 444442
Q ss_pred CCCCceEEEEeCCCCeEEEEecCCcccceEEEec-CCCeEEEEecCCceEEEEEccCCCCCcceeeee-------CCCCC
Q 046018 128 GDKTGRLLKYEKTTKEVTILLQGLAFANGVALSR-DRTFILIAETSNCRILRFWLHGPNSGKQDVFAE-------LPGFP 199 (310)
Q Consensus 128 ~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~-d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~p 199 (310)
.++.|..||..+++.............++++| +++ ++++...++.|..||...+.. ...+.. -....
T Consensus 185 --~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v 259 (393)
T 1erj_A 185 --GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSETGFL--VERLDSENESGTGHKDSV 259 (393)
T ss_dssp --TTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTTCCE--EEEEC------CCCSSCE
T ss_pred --CCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCCCcE--EEeecccccCCCCCCCCE
Confidence 27889999998887655444444567889999 777 555557788999999874321 111110 11234
Q ss_pred CeeEECCCCCEEEEEecCCc
Q 046018 200 DNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 200 ~~i~~d~~G~l~va~~~~~~ 219 (310)
..++++++|++.++....+.
T Consensus 260 ~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 260 YSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEEEECTTSSEEEEEETTSE
T ss_pred EEEEECCCCCEEEEEeCCCE
Confidence 56899999987777665554
No 165
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.69 E-value=1e-05 Score=72.10 Aligned_cols=147 Identities=12% Similarity=0.095 Sum_probs=96.4
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..+++++ ++.+.++.... .|..+|..+++....... ....+.+++++++|+ +.++...
T Consensus 109 ~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~----h~~~V~~v~~~~~~~-~l~sgs~------------ 170 (410)
T 1vyh_C 109 SPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKG----HTDSVQDISFDHSGK-LLASCSA------------ 170 (410)
T ss_dssp SCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECC----CSSCEEEEEECTTSS-EEEEEET------------
T ss_pred CcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEec----cCCcEEEEEEcCCCC-EEEEEeC------------
Confidence 3456889999 77766665554 488889888765433221 122468899999999 5555432
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRS 204 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 204 (310)
++.|..||..+++....... ......++++|+++.| ++.+.++.|..||...+. ....+.........+.+
T Consensus 171 -----D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l-~s~s~D~~i~~wd~~~~~--~~~~~~~h~~~v~~~~~ 242 (410)
T 1vyh_C 171 -----DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHI-VSASRDKTIKMWEVQTGY--CVKTFTGHREWVRMVRP 242 (410)
T ss_dssp -----TSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEE
T ss_pred -----CCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCc--EEEEEeCCCccEEEEEE
Confidence 77888999887655432222 2346789999999854 455778999999987431 11222222223456788
Q ss_pred CCCCCEEEEEecCCc
Q 046018 205 NSNGEFWVALHAKKG 219 (310)
Q Consensus 205 d~~G~l~va~~~~~~ 219 (310)
+++|++.++....+.
T Consensus 243 ~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 243 NQDGTLIASCSNDQT 257 (410)
T ss_dssp CTTSSEEEEEETTSC
T ss_pred CCCCCEEEEEcCCCe
Confidence 999988777766654
No 166
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.66 E-value=4e-07 Score=80.13 Aligned_cols=80 Identities=10% Similarity=-0.124 Sum_probs=60.0
Q ss_pred eEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEec---------CCceEEEEEccCCCCCcceeeeeCC-------
Q 046018 133 RLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAET---------SNCRILRFWLHGPNSGKQDVFAELP------- 196 (310)
Q Consensus 133 ~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~------- 196 (310)
.|..+|+++++..........| +++++||++++|++++ .++.|.+||+...+. ...+ ..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v--v~~I-~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP--IADI-ELPDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE--EEEE-EETTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE--EEEE-ECCCcccccc
Confidence 8999999998776544445568 9999999999999984 368899999875422 1111 111
Q ss_pred -CCCCeeEECCCC-CEEEEEec
Q 046018 197 -GFPDNVRSNSNG-EFWVALHA 216 (310)
Q Consensus 197 -~~p~~i~~d~~G-~l~va~~~ 216 (310)
..|.++++++|| .+||++..
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~ 144 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFG 144 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECS
T ss_pred CCCcceEEEcCCCCEEEEEccC
Confidence 369999999999 68888765
No 167
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.66 E-value=7e-06 Score=70.20 Aligned_cols=175 Identities=11% Similarity=0.163 Sum_probs=107.1
Q ss_pred EEeCCCCcEEEEE---CC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcC
Q 046018 53 RFDKKTGDLYIAD---AY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSG 128 (310)
Q Consensus 53 ~~d~~~g~l~v~~---~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~ 128 (310)
++.++++.||.++ .. ..|++++.++...+++.... . .+++++|+.||+++..
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~----~-----~~~~~~g~~iy~t~~g--------------- 165 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY----L-----FTCNTSDRYFYYNNPK--------------- 165 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC----C-----CCSEEETTEEEEECTT---------------
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC----c-----eEeeEECCEEEEEeCC---------------
Confidence 4444467899988 22 34999999987766554321 1 3457788889999842
Q ss_pred CCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCC-ceEEEEEccCCCCCcceeeeeCCCCCCeeEECCC
Q 046018 129 DKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSN-CRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSN 207 (310)
Q Consensus 129 ~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 207 (310)
...|++.+.+++..+++..+ +..+.+.|+++.||+++... ..|++.++++.. ...+.+.. . ..++++
T Consensus 166 --~~~Iy~~~l~g~~~~~l~~~---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~---~~~Lt~~~-~---~~~~~~ 233 (302)
T 3s25_A 166 --NGQLYRYDTASQSEALFYDC---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN---PVVLTEAN-I---EHYNVY 233 (302)
T ss_dssp --TCCEEEEETTTTEEEEEECS---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC---CEECSCSC-E---EEEEEE
T ss_pred --CceEEEEECCCCCEEEEeCC---CccceeeecCCEEEEEEcCCCcEEEEEECCCCC---eEEEeCCC-c---ceEEEC
Confidence 56799999988777766442 22345779999999997654 489999988642 23332211 1 224444
Q ss_pred C-CEEEEEecCCccceeeeeeccccccEEeeccchhhhhcccccCCCCceEEEEECCCCCEEEEEEcCCCCeecceeEEE
Q 046018 208 G-EFWVALHAKKGLFGKLILLNSWLGKTLLKLPLSFRQLHSLLVGGKPHATAIKLSEKGEVLEVLEDCEGKTLSFISEVE 286 (310)
Q Consensus 208 G-~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~g~~~~~~~~~~ 286 (310)
| .||.+...... .+.+++.+|...+.+.... +..+.
T Consensus 234 g~~Iy~~~~~~~~-------------------------------------~i~~~~~DG~~r~~l~~~~------~~~i~ 270 (302)
T 3s25_A 234 GSLIFYQRGGDNP-------------------------------------ALCVVKNDGTGFKELAKGE------FCNIN 270 (302)
T ss_dssp TTEEEEEECSSSC-------------------------------------EEEEEETTSCCCEEEEESC------EEEEE
T ss_pred CCEEEEEECCCCc-------------------------------------EEEEEECCCCccEEeeCCc------cceEE
Confidence 5 35444322111 2334555554434333211 23455
Q ss_pred EeCCEEEEecCCCCeEEEec
Q 046018 287 EKDGQLWMGSVLMPFIGIYN 306 (310)
Q Consensus 287 ~~~g~l~vgs~~~~~i~~~~ 306 (310)
..++.||+..+....|.+++
T Consensus 271 i~~d~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 271 VTSQYVYFTDFVSNKEYCTS 290 (302)
T ss_dssp ECSSEEEEEETTTCCEEEEE
T ss_pred EeCCEEEEEECCCCeEEEEE
Confidence 67888888888777777765
No 168
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.66 E-value=3.2e-05 Score=73.68 Aligned_cols=163 Identities=10% Similarity=0.126 Sum_probs=101.3
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ ++++.++.... .|..+|..++......... ...+.+++++|+++ ..++.+
T Consensus 431 ~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h----~~~v~~~~~s~~~~-~l~s~s------------- 491 (694)
T 3dm0_A 431 HFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVSTRRFVGH----TKDVLSVAFSLDNR-QIVSAS------------- 491 (694)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECC----SSCEEEEEECTTSS-CEEEEE-------------
T ss_pred CcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcceeEEeCC----CCCEEEEEEeCCCC-EEEEEe-------------
Confidence 4566789999 77766555544 4888899887654332221 12467899999999 555543
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCC----cccceEEEecCCC-eEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGL----AFANGVALSRDRT-FILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPD 200 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~----~~~~gi~~~~d~~-~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~ 200 (310)
.++.|..||..+.....+.... .....++++|++. .++++.+.++.|.+||...... ...+..-.+...
T Consensus 492 ----~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~~~~h~~~v~ 565 (694)
T 3dm0_A 492 ----RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--RSTLAGHTGYVS 565 (694)
T ss_dssp ----TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEE
T ss_pred ----CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE--EEEEcCCCCCEE
Confidence 2778999998654433332211 2246899999863 3566667889999999874311 111211223456
Q ss_pred eeEECCCCCEEEEEecCCccceeeeeeccccccEEeec
Q 046018 201 NVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKL 238 (310)
Q Consensus 201 ~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~ 238 (310)
.++++++|++.++....+.+ ...+...++.+..+
T Consensus 566 ~v~~spdg~~l~sg~~Dg~i----~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 566 TVAVSPDGSLCASGGKDGVV----LLWDLAEGKKLYSL 599 (694)
T ss_dssp EEEECTTSSEEEEEETTSBC----EEEETTTTEEEECC
T ss_pred EEEEeCCCCEEEEEeCCCeE----EEEECCCCceEEEe
Confidence 78999999988877766653 22333455555444
No 169
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.66 E-value=4.5e-06 Score=69.72 Aligned_cols=145 Identities=12% Similarity=0.061 Sum_probs=87.8
Q ss_pred ceeceEEEeCCCCc-EEEEECC----CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAY----LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQF 121 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~----~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~ 121 (310)
..+..+++++ +|+ |+++... ..|+.++..++..+.+... ..+..++++|+|++|+++...
T Consensus 85 ~~~~~~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~spdg~~l~~~~~~-------- 149 (297)
T 2ojh_A 85 ICNNDHGISP-DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN------LPSYWHGWSPDGKSFTYCGIR-------- 149 (297)
T ss_dssp CBCSCCEECT-TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS------SSEEEEEECTTSSEEEEEEEE--------
T ss_pred ccccceEECC-CCCEEEEEEeCCCCcceEEEEECCCCceEEeecC------CCccceEECCCCCEEEEEECC--------
Confidence 4556799999 665 4554422 2488888887765433211 135678999999966655421
Q ss_pred hhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCC--ceEEEEEccCCCCCcceeeeeCCCCC
Q 046018 122 MSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSN--CRILRFWLHGPNSGKQDVFAELPGFP 199 (310)
Q Consensus 122 ~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~p 199 (310)
...-.|+.++.+++....+.........++++||++.|+++.... ..|+.++..+. ....+.......
T Consensus 150 -------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~ 219 (297)
T 2ojh_A 150 -------DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS---SVERITDSAYGD 219 (297)
T ss_dssp -------TTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---CEEECCCCSEEE
T ss_pred -------CCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC---CcEEEecCCccc
Confidence 112367888887777766555455678899999999887765433 45666554432 122222212233
Q ss_pred CeeEECCCCCEE-EEEec
Q 046018 200 DNVRSNSNGEFW-VALHA 216 (310)
Q Consensus 200 ~~i~~d~~G~l~-va~~~ 216 (310)
..++++++|+.. ++...
T Consensus 220 ~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 220 WFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp EEEEECTTSSEEEEEEEE
T ss_pred CCeEECCCCCEEEEEEcC
Confidence 568899999744 44433
No 170
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.65 E-value=3.1e-05 Score=66.38 Aligned_cols=144 Identities=11% Similarity=0.107 Sum_probs=89.5
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCC------CCEEEEEeCCCchhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEH------KGVIYFTDSSTSFQRR 119 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~------g~~l~v~~~~~~~~~~ 119 (310)
.....+++++ ++.++++.... .|..+|.++..+..+... ...+..+++.|. +. .+++..
T Consensus 108 ~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~~~~~-~l~s~~------- 173 (319)
T 3frx_A 108 SDVMSVDIDK-KASMIISGSRDKTIKVWTIKGQCLATLLGH-----NDWVSQVRVVPNEKADDDSV-TIISAG------- 173 (319)
T ss_dssp SCEEEEEECT-TSCEEEEEETTSCEEEEETTSCEEEEECCC-----SSCEEEEEECCC------CC-EEEEEE-------
T ss_pred CcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeEEEEecc-----CCcEEEEEEccCCCCCCCcc-EEEEEe-------
Confidence 4566788998 66655555544 478888886654333211 123456666663 44 333332
Q ss_pred hhhhhhhcCCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCC
Q 046018 120 QFMSSILSGDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGF 198 (310)
Q Consensus 120 ~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 198 (310)
.++.|..||..+.+....... ......++++||++ ++++...++.|.+||...++. ...+ .....
T Consensus 174 ----------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~~~--~~~~-~~~~~ 239 (319)
T 3frx_A 174 ----------NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAAKKA--MYTL-SAQDE 239 (319)
T ss_dssp ----------TTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTEE--EEEE-ECCSC
T ss_pred ----------CCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcE--EEEe-cCCCc
Confidence 377899999987766543332 33467899999998 445556778999999874311 1111 12234
Q ss_pred CCeeEECCCCCEEEEEecCC
Q 046018 199 PDNVRSNSNGEFWVALHAKK 218 (310)
Q Consensus 199 p~~i~~d~~G~l~va~~~~~ 218 (310)
...++++++|.+.++....+
T Consensus 240 v~~~~~sp~~~~la~~~~~~ 259 (319)
T 3frx_A 240 VFSLAFSPNRYWLAAATATG 259 (319)
T ss_dssp EEEEEECSSSSEEEEEETTE
T ss_pred EEEEEEcCCCCEEEEEcCCC
Confidence 56789999998777665544
No 171
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.65 E-value=3.7e-06 Score=77.55 Aligned_cols=111 Identities=6% Similarity=0.007 Sum_probs=74.5
Q ss_pred CCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEE-e-CCCCEEEEEeCCCc-h-hhhhhhhhhhcCCCCc
Q 046018 58 TGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDI-D-EHKGVIYFTDSSTS-F-QRRQFMSSILSGDKTG 132 (310)
Q Consensus 58 ~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~-d-~~g~~l~v~~~~~~-~-~~~~~~~~~~~~~~~g 132 (310)
...|||.+... .|.++|.++.+...+...+.+ ..|.++++ + |+++++|+++.... . .....+. . .....+
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g---~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~-~-~~~~~~ 175 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNA---KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNME-D-VANYVN 175 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSC---CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTT-C-GGGEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC---CCCcceeeeecCCCcEEEEecccccccCCCCcccc-c-ccccCc
Confidence 34799998874 599999999987766543222 36889997 5 89998998863210 0 0000000 0 112356
Q ss_pred eEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCC
Q 046018 133 RLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSN 173 (310)
Q Consensus 133 ~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~ 173 (310)
.+..+|.++.+..........|.+++++|||+++|+++..+
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~s 216 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNS 216 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCT
T ss_pred eEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCc
Confidence 78999999876654333333799999999999999998665
No 172
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.64 E-value=9.8e-06 Score=71.18 Aligned_cols=211 Identities=12% Similarity=0.110 Sum_probs=111.0
Q ss_pred CCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEE
Q 046018 58 TGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKY 137 (310)
Q Consensus 58 ~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~ 137 (310)
++.||++.....|+.+|+++++..--... ... . ....++ .++. +|++. ..+.|+.+
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~-~~~-~--~~~p~~-~~~~-v~v~~------------------~~g~l~~~ 158 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKV-AGE-A--LSRPVV-SDGL-VLIHT------------------SNGQLQAL 158 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC-SSC-C--CSCCEE-ETTE-EEEEC------------------TTSEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeC-CCc-e--EcCCEE-ECCE-EEEEc------------------CCCeEEEE
Confidence 68999998877899999998875321121 111 1 111223 2565 99876 26789999
Q ss_pred eCCCCeEEEEecCCcc------cceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCC---------CCCee
Q 046018 138 EKTTKEVTILLQGLAF------ANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPG---------FPDNV 202 (310)
Q Consensus 138 d~~~~~~~~~~~~~~~------~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---------~p~~i 202 (310)
|+++|+.......... ....++. ++ .+|+. +.++.|+.+|+..++...........+ .....
T Consensus 159 d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~-~v~~g-~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p 235 (376)
T 3q7m_A 159 NEADGAVKWTVNLDMPSLSLRGESAPTTA-FG-AAVVG-GDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTP 235 (376)
T ss_dssp ETTTCCEEEEEECCC-----CCCCCCEEE-TT-EEEEC-CTTTEEEEEETTTCCEEEEEECCC-----------CCCCCC
T ss_pred ECCCCcEEEEEeCCCCceeecCCCCcEEE-CC-EEEEE-cCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCc
Confidence 9988876543221111 1233343 33 47776 566899999986432110000000000 00111
Q ss_pred EECCCCCEEEEEecCCccceeeeee-ccccccEEeeccchhhh-h----cccccCCCCceEEEEECC-CCCEEEEEEcCC
Q 046018 203 RSNSNGEFWVALHAKKGLFGKLILL-NSWLGKTLLKLPLSFRQ-L----HSLLVGGKPHATAIKLSE-KGEVLEVLEDCE 275 (310)
Q Consensus 203 ~~d~~G~l~va~~~~~~~~~~~i~~-~~~~g~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~d~-~g~~~~~~~~~~ 275 (310)
.+ .+|.+|++...+. +.. +..+|+.+...+.+... + ..++++ .....+.++|+ +|+.+.......
T Consensus 236 ~~-~~~~v~~~~~~g~------l~~~d~~tG~~~w~~~~~~~~~~~~~~~~l~~~-~~~g~l~~~d~~tG~~~w~~~~~~ 307 (376)
T 3q7m_A 236 VV-VNGVVFALAYNGN------LTALDLRSGQIMWKRELGSVNDFIVDGNRIYLV-DQNDRVMALTIDGGVTLWTQSDLL 307 (376)
T ss_dssp EE-ETTEEEEECTTSC------EEEEETTTCCEEEEECCCCEEEEEEETTEEEEE-ETTCCEEEEETTTCCEEEEECTTT
T ss_pred EE-ECCEEEEEecCcE------EEEEECCCCcEEeeccCCCCCCceEECCEEEEE-cCCCeEEEEECCCCcEEEeecccC
Confidence 22 3578998876544 444 44577777655432110 0 011111 12234567775 466554443111
Q ss_pred CCeecceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 276 GKTLSFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 276 g~~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
+ ...+.....+++||+++. ...|+.++.
T Consensus 308 ~---~~~~~~~~~~~~l~v~~~-~g~l~~~d~ 335 (376)
T 3q7m_A 308 H---RLLTSPVLYNGNLVVGDS-EGYLHWINV 335 (376)
T ss_dssp T---SCCCCCEEETTEEEEECT-TSEEEEEET
T ss_pred C---CcccCCEEECCEEEEEeC-CCeEEEEEC
Confidence 1 123334456899999986 567888874
No 173
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.64 E-value=1.4e-05 Score=68.08 Aligned_cols=147 Identities=9% Similarity=0.094 Sum_probs=95.1
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +++++++... +.|..++..+++....... ....+..++++|+++ ++++..
T Consensus 24 ~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~----h~~~v~~~~~~~~~~-~l~s~~------------- 84 (312)
T 4ery_A 24 KAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISG----HKLGISDVAWSSDSN-LLVSAS------------- 84 (312)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECC----CSSCEEEEEECTTSS-EEEEEE-------------
T ss_pred CcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhcc----CCCceEEEEEcCCCC-EEEEEC-------------
Confidence 4566899999 6765555444 4477888887765443322 112467899999999 444432
Q ss_pred hcCCCCceEEEEeCCCCeEEEEec-CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRS 204 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 204 (310)
.++.|..||..+++...... .......++++|+++.| ++...++.|.+||...+.. ...+.........+++
T Consensus 85 ----~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~--~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 85 ----DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI-VSGSFDESVRIWDVKTGKC--LKTLPAHSDPVSAVHF 157 (312)
T ss_dssp ----TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEEE
T ss_pred ----CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCEE--EEEecCCCCcEEEEEE
Confidence 27789999998776544332 23345789999999854 4556778999999874311 1112111223467899
Q ss_pred CCCCCEEEEEecCCc
Q 046018 205 NSNGEFWVALHAKKG 219 (310)
Q Consensus 205 d~~G~l~va~~~~~~ 219 (310)
+++|++.++....+.
T Consensus 158 ~~~~~~l~~~~~d~~ 172 (312)
T 4ery_A 158 NRDGSLIVSSSYDGL 172 (312)
T ss_dssp CTTSSEEEEEETTSC
T ss_pred cCCCCEEEEEeCCCc
Confidence 999987777666554
No 174
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.63 E-value=2.9e-05 Score=67.24 Aligned_cols=148 Identities=9% Similarity=0.053 Sum_probs=86.2
Q ss_pred ceeceEEEeCCCCcEEE-EECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCC----------CEEEEEeCCCc
Q 046018 47 GRPLGIRFDKKTGDLYI-ADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHK----------GVIYFTDSSTS 115 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v-~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g----------~~l~v~~~~~~ 115 (310)
.....+++++ +++..+ +...+.|..+|..+........ .......+..++++|++ . ++++..
T Consensus 119 ~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~l~s~~--- 191 (343)
T 2xzm_R 119 SEVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAE--KENHSDWVSCVRYSPIMKSANKVQPFAP-YFASVG--- 191 (343)
T ss_dssp SCEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCT--TTSCSSCEEEEEECCCCCSCSCCCSSCC-EEEEEE---
T ss_pred CcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeec--ccCCCceeeeeeeccccccccccCCCCC-EEEEEc---
Confidence 4566899999 665444 4444458888887543221111 11112245677777776 5 344332
Q ss_pred hhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC
Q 046018 116 FQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL 195 (310)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~ 195 (310)
.++.|..||........+.........++++||++.| ++...++.|.+||...... ....+ ..
T Consensus 192 --------------~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l-~sgs~dg~v~iwd~~~~~~-~~~~~-~~ 254 (343)
T 2xzm_R 192 --------------WDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYI-ATGGKDKKLLIWDILNLTY-PQREF-DA 254 (343)
T ss_dssp --------------TTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEE-EEEETTCEEEEEESSCCSS-CSEEE-EC
T ss_pred --------------CCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEE-EEEcCCCeEEEEECCCCcc-cceee-cC
Confidence 3788999996533223333333446789999999954 4556788999999843211 11112 11
Q ss_pred CCCCCeeEECCCCCEEEEEecCC
Q 046018 196 PGFPDNVRSNSNGEFWVALHAKK 218 (310)
Q Consensus 196 ~~~p~~i~~d~~G~l~va~~~~~ 218 (310)
......+++++++.+.++...+.
T Consensus 255 ~~~v~~v~~sp~~~~la~~~d~~ 277 (343)
T 2xzm_R 255 GSTINQIAFNPKLQWVAVGTDQG 277 (343)
T ss_dssp SSCEEEEEECSSSCEEEEEESSC
T ss_pred CCcEEEEEECCCCCEEEEECCCC
Confidence 22356789999998766554443
No 175
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.63 E-value=2e-06 Score=75.33 Aligned_cols=149 Identities=9% Similarity=0.069 Sum_probs=92.6
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +|+..++... +.|..+|.++++....... ....++.+++.+++..++++..
T Consensus 140 ~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~----h~~~v~~v~~s~~~~~~~~s~~------------- 201 (357)
T 4g56_B 140 DIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNA----HSSEVNCVAACPGKDTIFLSCG------------- 201 (357)
T ss_dssp SCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECC----CSSCEEEEEECTTCSSCEEEEE-------------
T ss_pred CCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcC----CCCCEEEEEEccCCCceeeeec-------------
Confidence 4566899999 7765555444 4488889998875433221 1234678999988753555442
Q ss_pred hcCCCCceEEEEeCCCCeEEEEec---CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCee
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQ---GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNV 202 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~---~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i 202 (310)
.++.|..||..+++...... ....+..++++|++..++++...++.|..||...+.. ...+.........+
T Consensus 202 ----~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~--~~~~~~~~~~v~~l 275 (357)
T 4g56_B 202 ----EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS--AQTSAVHSQNITGL 275 (357)
T ss_dssp ----TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG--CEEECCCSSCEEEE
T ss_pred ----cCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE--eEEEeccceeEEEE
Confidence 26789999987765433221 1233578999998766777667788999999864321 12222122334678
Q ss_pred EECCCCC-EEEEEecCCc
Q 046018 203 RSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 203 ~~d~~G~-l~va~~~~~~ 219 (310)
++.++|. +.++....+.
T Consensus 276 ~~sp~~~~~lasgs~D~~ 293 (357)
T 4g56_B 276 AYSYHSSPFLASISEDCT 293 (357)
T ss_dssp EECSSSSCCEEEEETTSC
T ss_pred EEcCCCCCEEEEEeCCCE
Confidence 9998884 4444444443
No 176
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.63 E-value=4.7e-05 Score=66.37 Aligned_cols=146 Identities=9% Similarity=0.019 Sum_probs=90.9
Q ss_pred eeceEEEeCCCC-cEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeC--CCCEEEEEeCCCchhhhhhhhh
Q 046018 48 RPLGIRFDKKTG-DLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDE--HKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 48 ~p~gl~~d~~~g-~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~--~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
....+++.+ ++ .|..+...+.|..+|.++++........ ...+..+++.+ +|+ ++++..
T Consensus 156 ~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~g~-~l~sgs------------ 217 (354)
T 2pbi_B 156 YLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGH----GADVLCLDLAPSETGN-TFVSGG------------ 217 (354)
T ss_dssp CEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECC----SSCEEEEEECCCSSCC-EEEEEE------------
T ss_pred cEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC----CCCeEEEEEEeCCCCC-EEEEEe------------
Confidence 345788888 55 4555544445888899887654332211 11345566655 577 444432
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC--CCCCCe
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL--PGFPDN 201 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~p~~ 201 (310)
.++.|..||..+++....... ....+.++++|+++ ++++...++.|..||+.... ....+... ......
T Consensus 218 -----~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~ 289 (354)
T 2pbi_B 218 -----CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD-AFASGSDDATCRLYDLRADR--EVAIYSKESIIFGASS 289 (354)
T ss_dssp -----TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEE
T ss_pred -----CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCCc--EEEEEcCCCcccceeE
Confidence 278899999988776543333 33468999999998 45555678899999986431 11112111 112356
Q ss_pred eEECCCCCEEEEEecCCc
Q 046018 202 VRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 202 i~~d~~G~l~va~~~~~~ 219 (310)
++++++|++.++....+.
T Consensus 290 ~~~s~~g~~l~~g~~d~~ 307 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDYT 307 (354)
T ss_dssp EEECTTSSEEEEEETTSC
T ss_pred EEEeCCCCEEEEEECCCc
Confidence 889999988777766654
No 177
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.62 E-value=7.2e-06 Score=72.40 Aligned_cols=187 Identities=11% Similarity=0.012 Sum_probs=107.8
Q ss_pred EEeccccccccCCCCCccccccceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeecCCc-----------cc
Q 046018 25 AVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAAGQ-----------PL 92 (310)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~-----------~~ 92 (310)
....+..++........+......+..+++++ +++ |+++...+.|..+|..+++........... ..
T Consensus 128 ~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (425)
T 1r5m_A 128 ENGELRLWNKTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDG 206 (425)
T ss_dssp TTSCEEEEETTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------C
T ss_pred CCCeEEEEeCCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCc
Confidence 33445555533321112222334567899998 555 555555555888999887654332221110 00
Q ss_pred cCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe-cCCcccceEEEecCCCeEEEEec
Q 046018 93 RFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL-QGLAFANGVALSRDRTFILIAET 171 (310)
Q Consensus 93 ~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~ 171 (310)
..+..+++.+++. ++++. ..+.|..||..+++..... ........++++|+++.|+.+ .
T Consensus 207 ~~~~~~~~~~~~~-~~~~~------------------~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~ 266 (425)
T 1r5m_A 207 SLGVDVEWVDDDK-FVIPG------------------PKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA-S 266 (425)
T ss_dssp CCBSCCEEEETTE-EEEEC------------------GGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE-E
T ss_pred ceeeEEEEcCCCE-EEEEc------------------CCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE-c
Confidence 1167888888876 66654 3778999998876543322 223345789999999855554 6
Q ss_pred CCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeeccc
Q 046018 172 SNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPL 240 (310)
Q Consensus 172 ~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~ 240 (310)
.++.|.+|+...... ...+.........+++.++| ++++....+. +..++ ..++.+..+..
T Consensus 267 ~d~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~-----i~i~d~~~~~~~~~~~~ 328 (425)
T 1r5m_A 267 DDGTLRIWHGGNGNS--QNCFYGHSQSIVSASWVGDD-KVISCSMDGS-----VRLWSLKQNTLLALSIV 328 (425)
T ss_dssp TTSCEEEECSSSBSC--SEEECCCSSCEEEEEEETTT-EEEEEETTSE-----EEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEECCCCcc--ceEecCCCccEEEEEECCCC-EEEEEeCCCc-----EEEEECCCCcEeEeccc
Confidence 778999999764311 12222222345678999999 5555444443 44443 45555554433
No 178
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.61 E-value=1.1e-05 Score=78.01 Aligned_cols=162 Identities=7% Similarity=0.027 Sum_probs=100.6
Q ss_pred ceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +++ |.++...+.|..+|.++++....... ....+..++++|++++|..+.
T Consensus 56 ~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~-------------- 116 (814)
T 3mkq_A 56 TPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEA----HPDYIRSIAVHPTKPYVLSGS-------------- 116 (814)
T ss_dssp SCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSSEEEEEE--------------
T ss_pred CcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEec----CCCCEEEEEEeCCCCEEEEEc--------------
Confidence 4567899999 665 44554444588889887765433222 123578899999999555444
Q ss_pred hcCCCCceEEEEeCCCC-eEEEEec-CCcccceEEEec-CCCeEEEEecCCceEEEEEccCCCCCcceeeee-CCCCCCe
Q 046018 126 LSGDKTGRLLKYEKTTK-EVTILLQ-GLAFANGVALSR-DRTFILIAETSNCRILRFWLHGPNSGKQDVFAE-LPGFPDN 201 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~-~~~~~~~-~~~~~~gi~~~~-d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~ 201 (310)
.++.|..||.+++ ....... .......++++| +++ ++++...++.|.+|+...... ...+.. .......
T Consensus 117 ----~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~~--~~~~~~~~~~~v~~ 189 (814)
T 3mkq_A 117 ----DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQSTP--NFTLTTGQERGVNY 189 (814)
T ss_dssp ----TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCSSC--SEEEECCCTTCCCE
T ss_pred ----CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcc--eeEEecCCCCCEEE
Confidence 2678999998765 3333332 334467899999 666 455556778999999864321 122222 2234567
Q ss_pred eEECC--CCCEEEEEecCCccceeeeeecc-ccccEEeecc
Q 046018 202 VRSNS--NGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLP 239 (310)
Q Consensus 202 i~~d~--~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~ 239 (310)
+++.+ +|.+.++....+. +..++ ..++.+..+.
T Consensus 190 ~~~~~~~~~~~l~~~~~dg~-----i~~~d~~~~~~~~~~~ 225 (814)
T 3mkq_A 190 VDYYPLPDKPYMITASDDLT-----IKIWDYQTKSCVATLE 225 (814)
T ss_dssp EEECCSTTCCEEEEECTTSE-----EEEEETTTTEEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCE-----EEEEECCCCcEEEEEc
Confidence 88887 8877776666554 33433 4455554443
No 179
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.61 E-value=7.1e-06 Score=78.65 Aligned_cols=203 Identities=10% Similarity=0.048 Sum_probs=110.6
Q ss_pred EEEeCCCCCeEEEEEeccccccccCC---CCCccccccceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecC
Q 046018 12 LKWQGDELGWTEFAVTTSQRKECVRP---FAPDIEHICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAA 88 (310)
Q Consensus 12 ~~~~~~~~~W~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~ 88 (310)
..|.++....+-.....+..++..+. ....+......+..+++++ +|+..+......|+.+|.++++..++.....
T Consensus 114 ~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIRGRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp CEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEETTEEEEEETTTTEEEECCCCCC
T ss_pred eEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEeCCcEEEEecCCCCEEEeccCCc
Confidence 34666554311111244555666553 3233333335677899999 7764333334469999999887655432211
Q ss_pred Cc------------cccCCcceEEeCCCCEEEEEeCCCchhh--------------hhhhhhhh-cCCCCceEEEEeCCC
Q 046018 89 GQ------------PLRFTNDLDIDEHKGVIYFTDSSTSFQR--------------RQFMSSIL-SGDKTGRLLKYEKTT 141 (310)
Q Consensus 89 ~~------------~~~~~~~i~~d~~g~~l~v~~~~~~~~~--------------~~~~~~~~-~~~~~g~v~~~d~~~ 141 (310)
.. ....+.+++++|||++|+++........ ....+... .......|+.||.++
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 10 0112578999999997777642110000 00000000 000122688999887
Q ss_pred -CeEEEEecC---CcccceEEEecCCCeEEEEec----CCceEEEEEccCCCCCcceeeee-CCC---CCCeeEECCCCC
Q 046018 142 -KEVTILLQG---LAFANGVALSRDRTFILIAET----SNCRILRFWLHGPNSGKQDVFAE-LPG---FPDNVRSNSNGE 209 (310)
Q Consensus 142 -~~~~~~~~~---~~~~~gi~~~~d~~~lyv~~~----~~~~i~~~~~~~~~~~~~~~~~~-~~~---~p~~i~~d~~G~ 209 (310)
++...+... ......++| |||+.|+++.. ....|+++|..++.. ...+.. ... ....+++++||+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~~~~spdg~ 349 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ--RVLAHETSPTWVPLHNSLRFLDDGS 349 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE--EEEEEEECSSCCCCCSCCEECTTSC
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce--EEEEEcCCCCcCCcCCceEECCCCe
Confidence 776554322 233568999 99998877643 246899999875421 122222 111 235789999998
Q ss_pred EEEEEecCC
Q 046018 210 FWVALHAKK 218 (310)
Q Consensus 210 l~va~~~~~ 218 (310)
++++....+
T Consensus 350 ~~~~~~~~g 358 (741)
T 2ecf_A 350 ILWSSERTG 358 (741)
T ss_dssp EEEEECTTS
T ss_pred EEEEecCCC
Confidence 666655443
No 180
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.61 E-value=4.1e-06 Score=79.31 Aligned_cols=155 Identities=13% Similarity=0.027 Sum_probs=93.0
Q ss_pred CCCCc-EEEEECC-CceEEEeCC--C-CeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCC
Q 046018 56 KKTGD-LYIADAY-LGFQVVGPE--G-GLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDK 130 (310)
Q Consensus 56 ~~~g~-l~v~~~~-~gi~~~d~~--~-~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~ 130 (310)
|+... |.++... ..|+.++.+ + +..+++.............+++++|||++|+++.....- ......
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~--------~~~~~~ 159 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTG--------EGPSDV 159 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECS--------SSTTCE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccC--------CCCCCc
Confidence 73445 5555443 459999987 4 554444321100012245688999999977776521000 000012
Q ss_pred CceEEEEeCCC------CeEEEEe-cCCcccceEEEecCCCeEEEEecCC-------ceEEEEEccC-CCCCcceeeee-
Q 046018 131 TGRLLKYEKTT------KEVTILL-QGLAFANGVALSRDRTFILIAETSN-------CRILRFWLHG-PNSGKQDVFAE- 194 (310)
Q Consensus 131 ~g~v~~~d~~~------~~~~~~~-~~~~~~~gi~~~~d~~~lyv~~~~~-------~~i~~~~~~~-~~~~~~~~~~~- 194 (310)
...|+++|.++ ++.+.+. ........++++|||+.|+++.... ..|++++.++ +.......+..
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 35799999987 6666655 4444567789999999887765432 5899999873 32112333332
Q ss_pred CCCCCCeeEECCCCCEEEEEecCC
Q 046018 195 LPGFPDNVRSNSNGEFWVALHAKK 218 (310)
Q Consensus 195 ~~~~p~~i~~d~~G~l~va~~~~~ 218 (310)
.......+++++||+++++....+
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~~~ 263 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDRTG 263 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECTTS
T ss_pred CCceEcceEECCCCeEEEEECCCC
Confidence 234456789999999877766544
No 181
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.60 E-value=2.5e-05 Score=66.51 Aligned_cols=149 Identities=12% Similarity=0.135 Sum_probs=95.0
Q ss_pred cceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
......++++| ++.+.++....+ |..+|.+++......... ......+++.++++ +.++..
T Consensus 13 ~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~----~~~v~~~~~~~~~~-~l~s~s------------ 74 (304)
T 2ynn_A 13 SDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVT----ETPVRAGKFIARKN-WIIVGS------------ 74 (304)
T ss_dssp CSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECC----SSCEEEEEEEGGGT-EEEEEE------------
T ss_pred CCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeecc----CCcEEEEEEeCCCC-EEEEEC------------
Confidence 35677899999 776555555444 888899887653332221 12357889999999 444442
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEec-CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeE
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVR 203 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~ 203 (310)
.++.|..||..+++...... .......++++|+++. +++.+.++.|..||...+.. ....+..-......++
T Consensus 75 -----~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~~-~~~~~~~h~~~v~~v~ 147 (304)
T 2ynn_A 75 -----DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWA-LEQTFEGHEHFVMCVA 147 (304)
T ss_dssp -----TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTTE-EEEEECCCCSCEEEEE
T ss_pred -----CCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCcc-hhhhhcccCCcEEEEE
Confidence 27889999998876544333 2334678999999984 45557789999999864311 0111211123346788
Q ss_pred ECC-CCCEEEEEecCCc
Q 046018 204 SNS-NGEFWVALHAKKG 219 (310)
Q Consensus 204 ~d~-~G~l~va~~~~~~ 219 (310)
+++ ++.+.++....+.
T Consensus 148 ~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 148 FNPKDPSTFASGCLDRT 164 (304)
T ss_dssp ECTTCTTEEEEEETTSE
T ss_pred ECCCCCCEEEEEeCCCe
Confidence 888 5676666655554
No 182
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.60 E-value=3.4e-05 Score=71.78 Aligned_cols=235 Identities=11% Similarity=0.008 Sum_probs=126.9
Q ss_pred ce-eceEEEeC--CCCcEEEEECCCceEEEeCCCC------eEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchh
Q 046018 47 GR-PLGIRFDK--KTGDLYIADAYLGFQVVGPEGG------LATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQ 117 (310)
Q Consensus 47 ~~-p~gl~~d~--~~g~l~v~~~~~gi~~~d~~~~------~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~ 117 (310)
.. +..+++++ +...|..+...+.|..+|..++ ........ .. ....+..++++|+|++++++...
T Consensus 64 ~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~~~---- 137 (615)
T 1pgu_A 64 SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF-QV-LAGPISDISWDFEGRRLCVVGEG---- 137 (615)
T ss_dssp TSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEE-EC-CSSCEEEEEECTTSSEEEEEECC----
T ss_pred CceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchh-hc-ccccEEEEEEeCCCCEEEEeccC----
Confidence 45 77899988 5555666655555777777543 22222111 11 12357889999999966555432
Q ss_pred hhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCC
Q 046018 118 RRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPG 197 (310)
Q Consensus 118 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 197 (310)
....+.|+.||.. .....+.........++++|+++.++++...++.|..|+..... ....+.....
T Consensus 138 ----------~~~~~~v~~~d~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~~~~~ 204 (615)
T 1pgu_A 138 ----------RDNFGVFISWDSG-NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDRTHHK 204 (615)
T ss_dssp ----------SSCSEEEEETTTC-CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEECSSSC
T ss_pred ----------CCCccEEEEEECC-CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeecccCC
Confidence 1123678888842 33333333334568899999998556666778999999976321 1111211122
Q ss_pred ---CCCeeEECCC-CCEEEEEecCCccceeeeeecc-ccccEEeec-c---chhhhhcccccCCCCceEE--------EE
Q 046018 198 ---FPDNVRSNSN-GEFWVALHAKKGLFGKLILLNS-WLGKTLLKL-P---LSFRQLHSLLVGGKPHATA--------IK 260 (310)
Q Consensus 198 ---~p~~i~~d~~-G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~-~---~~~~~~~~~~~~~~~~~~~--------~~ 260 (310)
....++++++ |++.++....+. +..++ ..++.+..+ . .....+..+.+. ....++ ..
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~~~dg~-----i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~ 278 (615)
T 1pgu_A 205 QGSFVRDVEFSPDSGEFVITVGSDRK-----ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRV 278 (615)
T ss_dssp TTCCEEEEEECSTTCCEEEEEETTCC-----EEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEE
T ss_pred CCceEEEEEECCCCCCEEEEEeCCCe-----EEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEE
Confidence 3467899999 887776655554 44443 566666665 2 222334444444 222211 11
Q ss_pred ECCC-CCEEEEEEcCCCCeecceeEEE-EeCCEEEEecCCCCeEEEecc
Q 046018 261 LSEK-GEVLEVLEDCEGKTLSFISEVE-EKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 261 ~d~~-g~~~~~~~~~~g~~~~~~~~~~-~~~g~l~vgs~~~~~i~~~~~ 307 (310)
+|.. ++.+..+..+.......+..+. ..+..+..|+. +..|.+++.
T Consensus 279 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~i~~~d~ 326 (615)
T 1pgu_A 279 WDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL-DGTLNFYEL 326 (615)
T ss_dssp EETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET-TSCEEEEET
T ss_pred EECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEEC-CCCEEEEEC
Confidence 2211 3333333322111112233333 34566666665 666777764
No 183
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.59 E-value=7.3e-05 Score=64.84 Aligned_cols=152 Identities=13% Similarity=0.035 Sum_probs=91.0
Q ss_pred cceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCC--CCEEEEEeCCCchhhhhhh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEH--KGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~--g~~l~v~~~~~~~~~~~~~ 122 (310)
......+++++ +++++++... +.|..+|.+......+... .+ ....+.++++.++ ++ ++++..
T Consensus 11 ~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~~-~l~s~~---------- 76 (379)
T 3jrp_A 11 NELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTL-TG-HEGPVWRVDWAHPKFGT-ILASCS---------- 76 (379)
T ss_dssp CCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEE-CC-CSSCEEEEEECCGGGCS-EEEEEE----------
T ss_pred cccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEe-cC-CCCcEEEEEeCCCCCCC-EEEEec----------
Confidence 35567899999 6665555444 4477777764433322221 11 1224678888866 88 444432
Q ss_pred hhhhcCCCCceEEEEeCCCCeEEEE--e-cCCcccceEEEecC--CCeEEEEecCCceEEEEEccCCCCCcceeeeeCCC
Q 046018 123 SSILSGDKTGRLLKYEKTTKEVTIL--L-QGLAFANGVALSRD--RTFILIAETSNCRILRFWLHGPNSGKQDVFAELPG 197 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~~~~~--~-~~~~~~~gi~~~~d--~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 197 (310)
.++.|..||..+++.... . ........++++|+ ++.++.+ ..++.|.+|+...........+.....
T Consensus 77 -------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 77 -------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp -------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred -------cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEe-cCCCcEEEEecCCCCceeeEEecCCCC
Confidence 267899999887763322 2 22344678999999 7755544 677899999987542222222222223
Q ss_pred CCCeeEECC-------------CCCEEEEEecCCc
Q 046018 198 FPDNVRSNS-------------NGEFWVALHAKKG 219 (310)
Q Consensus 198 ~p~~i~~d~-------------~G~l~va~~~~~~ 219 (310)
....+++++ ++.+.++....+.
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 183 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL 183 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSC
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCe
Confidence 346678887 6777776665554
No 184
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.58 E-value=6.1e-07 Score=81.94 Aligned_cols=120 Identities=18% Similarity=0.247 Sum_probs=82.0
Q ss_pred ccceeceEEEeCCCCcEEEEECC---------------------Cc-eEEEeCCCC-------eEEEEEee--cC-----
Q 046018 45 ICGRPLGIRFDKKTGDLYIADAY---------------------LG-FQVVGPEGG-------LATQLVTE--AA----- 88 (310)
Q Consensus 45 ~~~~p~gl~~d~~~g~l~v~~~~---------------------~g-i~~~d~~~~-------~~~~~~~~--~~----- 88 (310)
...+|.++++++.+|+||++-.. .| |+++..+++ +...++.. +.
T Consensus 382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~ 461 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence 33589999999989999999642 13 888865322 12333221 10
Q ss_pred ----------CccccCCcceEEeCCCCEEEE-EeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecC--Ccccc
Q 046018 89 ----------GQPLRFTNDLDIDEHKGVIYF-TDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQG--LAFAN 155 (310)
Q Consensus 89 ----------~~~~~~~~~i~~d~~g~~l~v-~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~~~ 155 (310)
...+..|++|+++++|+ ||| +|..... ...+.......|+++++++++++.+... ...|+
T Consensus 462 ~~~g~~~~~~~~~fnsPDnL~fd~~G~-LWf~TD~~~~~------~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpn 534 (592)
T 4a9v_A 462 PKGGSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSN------AGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVT 534 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCC------SGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEE
T ss_pred cccCccCccccCccCCCCceEECCCCC-EEEEeCCCcCc------cccccccCCceEEEEeCCCCeEEEEEeCCCCcccc
Confidence 12467899999999999 999 5543110 0011223355799999998998887643 35689
Q ss_pred eEEEecCCCeEEEEec
Q 046018 156 GVALSRDRTFILIAET 171 (310)
Q Consensus 156 gi~~~~d~~~lyv~~~ 171 (310)
|++++||++.|||+-+
T Consensus 535 GiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 535 GISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEECTTSSEEEEEEE
T ss_pred CCEECCCCCEEEEEEe
Confidence 9999999999999854
No 185
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.57 E-value=1.6e-05 Score=76.83 Aligned_cols=150 Identities=12% Similarity=0.110 Sum_probs=97.0
Q ss_pred ccceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhh
Q 046018 45 ICGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 45 ~~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~ 123 (310)
....+..+++++ +|.+.++... +.|..+|..+++....... ....+..++++|+|++|.++.
T Consensus 12 h~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~------------ 74 (814)
T 3mkq_A 12 RSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQV----TETPVRAGKFIARKNWIIVGS------------ 74 (814)
T ss_dssp ECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEEC----CSSCEEEEEEEGGGTEEEEEE------------
T ss_pred CCCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEec----CCCcEEEEEEeCCCCEEEEEe------------
Confidence 345677999999 6664444444 4488889888765433221 112467899999999555544
Q ss_pred hhhcCCCCceEEEEeCCCCeEEEEec-CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCee
Q 046018 124 SILSGDKTGRLLKYEKTTKEVTILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNV 202 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i 202 (310)
.++.|..||..+++...... .......++++|+++.|+.+ ..++.|.+|+.+.+.. ....+.........+
T Consensus 75 ------~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~vw~~~~~~~-~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 75 ------DDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSG-SDDLTVKLWNWENNWA-LEQTFEGHEHFVMCV 146 (814)
T ss_dssp ------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEE-ETTSEEEEEEGGGTSE-EEEEEECCSSCEEEE
T ss_pred ------CCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEE-cCCCEEEEEECCCCce-EEEEEcCCCCcEEEE
Confidence 27889999988776544333 33446789999999966554 5678999999874311 111222222345678
Q ss_pred EECC-CCCEEEEEecCCc
Q 046018 203 RSNS-NGEFWVALHAKKG 219 (310)
Q Consensus 203 ~~d~-~G~l~va~~~~~~ 219 (310)
++++ +|++.++....+.
T Consensus 147 ~~~p~~~~~l~~~~~dg~ 164 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRT 164 (814)
T ss_dssp EEETTEEEEEEEEETTSE
T ss_pred EEEcCCCCEEEEEeCCCe
Confidence 8888 7766666655554
No 186
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.57 E-value=0.00021 Score=63.17 Aligned_cols=160 Identities=8% Similarity=-0.009 Sum_probs=93.7
Q ss_pred ceeceEEEeCCCCcEE-EEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLY-IADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~-v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ ++.++ ++...+.|..+|..+++....... ....+..+++ +++.++.+.
T Consensus 135 ~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~--~~~~l~~~~-------------- 193 (401)
T 4aez_A 135 TYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAG----HQARVGCLSW--NRHVLSSGS-------------- 193 (401)
T ss_dssp CCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECC----CSSCEEEEEE--ETTEEEEEE--------------
T ss_pred CCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecC----CCCceEEEEE--CCCEEEEEc--------------
Confidence 4567899999 66544 444444588889887764333221 1123556666 455344443
Q ss_pred hcCCCCceEEEEeCCC-Ce-EEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeE
Q 046018 126 LSGDKTGRLLKYEKTT-KE-VTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVR 203 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~-~~-~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~ 203 (310)
.++.|..||... +. ...+........+++++|+++.|+. ...++.|.+||...+. ....+.........++
T Consensus 194 ----~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~~~~~--~~~~~~~~~~~v~~~~ 266 (401)
T 4aez_A 194 ----RSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLAS-GGNDNVVQIWDARSSI--PKFTKTNHNAAVKAVA 266 (401)
T ss_dssp ----TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE-EETTSCEEEEETTCSS--EEEEECCCSSCCCEEE
T ss_pred ----CCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEE-EeCCCeEEEccCCCCC--ccEEecCCcceEEEEE
Confidence 378899999863 22 3333333445689999999985554 4667899999987431 1112222234457899
Q ss_pred ECCCC-CEEEEEe--cCCccceeeeeecc-ccccEEeecc
Q 046018 204 SNSNG-EFWVALH--AKKGLFGKLILLNS-WLGKTLLKLP 239 (310)
Q Consensus 204 ~d~~G-~l~va~~--~~~~~~~~~i~~~~-~~g~~~~~~~ 239 (310)
+.++| .++++.. ..+. +..++ ..++.+..+.
T Consensus 267 ~~p~~~~ll~~~~gs~d~~-----i~i~d~~~~~~~~~~~ 301 (401)
T 4aez_A 267 WCPWQSNLLATGGGTMDKQ-----IHFWNAATGARVNTVD 301 (401)
T ss_dssp ECTTSTTEEEEECCTTTCE-----EEEEETTTCCEEEEEE
T ss_pred ECCCCCCEEEEecCCCCCE-----EEEEECCCCCEEEEEe
Confidence 99977 4555443 2333 34433 4555555443
No 187
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.56 E-value=9.3e-06 Score=70.36 Aligned_cols=145 Identities=11% Similarity=0.019 Sum_probs=89.7
Q ss_pred eeceEEEeC--CCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 48 RPLGIRFDK--KTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 48 ~p~gl~~d~--~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
....+++++ ++..+..+...+.|..+|.++++...+... .....+..++++|+|+ ++++..
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~---~~~~~i~~~~~~pdg~-~lasg~------------- 189 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA---KSDVEYSSGVLHKDSL-LLALYS------------- 189 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC---CSSCCCCEEEECTTSC-EEEEEC-------------
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec---CCCCceEEEEECCCCC-EEEEEc-------------
Confidence 356788876 444444455445588889988876433221 1122478899999999 665543
Q ss_pred hcCCCCceEEEEeCCCCeEE--EEec-CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCC-CcceeeeeCCCCC--
Q 046018 126 LSGDKTGRLLKYEKTTKEVT--ILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNS-GKQDVFAELPGFP-- 199 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~--~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~p-- 199 (310)
.++.|..||..+++.. .+.. .......++++|++..|..+. .+.|.+||+..... .....+.. ...+
T Consensus 190 ----~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~~-~~~~~~ 262 (343)
T 3lrv_A 190 ----PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYTI-PEFKTG 262 (343)
T ss_dssp ----TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCBC------C
T ss_pred ----CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeeccccc-cccccc
Confidence 2788999998877643 2322 234467999999999666654 44999999875321 11111110 1112
Q ss_pred -CeeEECCCCCEEEEEec
Q 046018 200 -DNVRSNSNGEFWVALHA 216 (310)
Q Consensus 200 -~~i~~d~~G~l~va~~~ 216 (310)
..++++++|++.++...
T Consensus 263 ~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 263 TVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp CEEEEECTTSSEEEEEET
T ss_pred ceEEEECCCCCEEEEecC
Confidence 24999999987777554
No 188
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.56 E-value=2.7e-05 Score=67.29 Aligned_cols=113 Identities=8% Similarity=0.001 Sum_probs=76.3
Q ss_pred ceeceEEEeCCC----CcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeC-CCCEEEEEeCCCchhhhh
Q 046018 47 GRPLGIRFDKKT----GDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDE-HKGVIYFTDSSTSFQRRQ 120 (310)
Q Consensus 47 ~~p~gl~~d~~~----g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~~l~v~~~~~~~~~~~ 120 (310)
.....+++++ + +.++++... +.|..+|.++++....... ....+..++++| +++ ++++..
T Consensus 70 ~~v~~~~~~~-~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~-~l~s~~-------- 135 (366)
T 3k26_A 70 ENFYTCAWTY-DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG----HGNAINELKFHPRDPN-LLLSVS-------- 135 (366)
T ss_dssp CCEEEEEEEE-CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES----CCSCEEEEEECSSCTT-EEEEEE--------
T ss_pred CcEEEEEecc-CCCCCCCEEEEecCCCEEEEEEchhceEeeeecC----CCCcEEEEEECCCCCC-EEEEEe--------
Confidence 3456788888 5 444444444 4488889887765433321 123578899999 888 554442
Q ss_pred hhhhhhcCCCCceEEEEeCCCCeEEEEe----cCCcccceEEEecCCCeEEEEecCCceEEEEEccC
Q 046018 121 FMSSILSGDKTGRLLKYEKTTKEVTILL----QGLAFANGVALSRDRTFILIAETSNCRILRFWLHG 183 (310)
Q Consensus 121 ~~~~~~~~~~~g~v~~~d~~~~~~~~~~----~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~ 183 (310)
.++.|..||..+++..... ........++++|+++.|+.+ ..++.|.+|+...
T Consensus 136 ---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~ 192 (366)
T 3k26_A 136 ---------KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSC-GMDHSLKLWRINS 192 (366)
T ss_dssp ---------TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEE-ETTSCEEEEESCS
T ss_pred ---------CCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEe-cCCCCEEEEECCC
Confidence 2788999999887765543 223446789999999855554 5678999999864
No 189
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.56 E-value=9.6e-06 Score=70.45 Aligned_cols=151 Identities=6% Similarity=-0.000 Sum_probs=90.3
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +|+++++... +.|..++.+.+....+... .+ ....+..++++|+|+ ++++..
T Consensus 62 ~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~-~~-h~~~v~~v~~sp~~~-~l~s~s------------- 124 (345)
T 3fm0_A 62 RTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTL-EG-HENEVKSVAWAPSGN-LLATCS------------- 124 (345)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEEECCC-EEEEEEE-CC-CSSCEEEEEECTTSS-EEEEEE-------------
T ss_pred CcEEEEEECC-CCCEEEEEECCCcEEEEEccCCCeEEEEEc-cC-CCCCceEEEEeCCCC-EEEEEE-------------
Confidence 4566899999 6665555444 4466777766544322221 11 123578899999999 555543
Q ss_pred hcCCCCceEEEEeCCCCe-EE---EEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCe
Q 046018 126 LSGDKTGRLLKYEKTTKE-VT---ILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDN 201 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~-~~---~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~ 201 (310)
.++.|..||..++. .+ .+.........++++|+++.|. +.+.++.|..|+...+.......+..-......
T Consensus 125 ----~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~ 199 (345)
T 3fm0_A 125 ----RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLA-SASYDDTVKLYREEEDDWVCCATLEGHESTVWS 199 (345)
T ss_dssp ----TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEE-EEETTSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred ----CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEE-EEeCCCcEEEEEecCCCEEEEEEecCCCCceEE
Confidence 26778888876542 22 1222233457899999998554 446778999998764311001111111233467
Q ss_pred eEECCCCCEEEEEecCCc
Q 046018 202 VRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 202 i~~d~~G~l~va~~~~~~ 219 (310)
++++++|++.++....+.
T Consensus 200 l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 200 LAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp EEECTTSSEEEEEETTSC
T ss_pred EEECCCCCEEEEEeCCCe
Confidence 899999988777666554
No 190
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.55 E-value=4e-05 Score=67.28 Aligned_cols=165 Identities=13% Similarity=0.033 Sum_probs=92.7
Q ss_pred ceeceEEEeCCC----C---cEEEEEC-CCceEEEeCCCCe------EEEEEeecCCc-cccCCcceEEe----CCCCE-
Q 046018 47 GRPLGIRFDKKT----G---DLYIADA-YLGFQVVGPEGGL------ATQLVTEAAGQ-PLRFTNDLDID----EHKGV- 106 (310)
Q Consensus 47 ~~p~gl~~d~~~----g---~l~v~~~-~~gi~~~d~~~~~------~~~~~~~~~~~-~~~~~~~i~~d----~~g~~- 106 (310)
.....+++++ + + +++++.. .+.|..++.++++ ...+ ...... ....+..++++ ++++.
T Consensus 63 ~~v~~~~~~~-~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 140 (397)
T 1sq9_A 63 SGLHHVDVLQ-AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL-DLLDSDMKKHSFWALKWGASNDRLLSHR 140 (397)
T ss_dssp TCEEEEEEEE-EEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEE-CCSCTTGGGSCEEEEEEECCC----CEE
T ss_pred CcEEEEEEec-ccccCCccccEEEEEcCCCCEEEEEccCCcccccccceee-cccccccCCCcEEEEEEeeccCCCCceE
Confidence 4456888888 6 6 5554444 4447777766554 2222 111000 02457889999 99994
Q ss_pred EEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCC------Ce-EE-----EEe-------cCCcccceEEEecCCCeEE
Q 046018 107 IYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTT------KE-VT-----ILL-------QGLAFANGVALSRDRTFIL 167 (310)
Q Consensus 107 l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~------~~-~~-----~~~-------~~~~~~~gi~~~~d~~~ly 167 (310)
++++. .++.|..||..+ ++ .. .+. ........++++|++ .++
T Consensus 141 l~~~~------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~ 201 (397)
T 1sq9_A 141 LVATD------------------VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIA 201 (397)
T ss_dssp EEEEE------------------TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEE
T ss_pred EEEEe------------------CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEE
Confidence 44443 267788888765 21 11 221 123346789999998 454
Q ss_pred EEecCCceEEEEEccCCCCCcceeeee---C---CCCCCeeEECCCCCEEEEEecC---Cccceeeeeecc-ccccEEee
Q 046018 168 IAETSNCRILRFWLHGPNSGKQDVFAE---L---PGFPDNVRSNSNGEFWVALHAK---KGLFGKLILLNS-WLGKTLLK 237 (310)
Q Consensus 168 v~~~~~~~i~~~~~~~~~~~~~~~~~~---~---~~~p~~i~~d~~G~l~va~~~~---~~~~~~~i~~~~-~~g~~~~~ 237 (310)
+...++.|.+||..... ....+.. . ......++++++|+++++.... +. +..++ ..++.+..
T Consensus 202 -~~~~dg~i~i~d~~~~~--~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~-----i~i~d~~~~~~~~~ 273 (397)
T 1sq9_A 202 -TGFNNGTVQISELSTLR--PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGC-----ITLYETEFGERIGS 273 (397)
T ss_dssp -EECTTSEEEEEETTTTE--EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEE-----EEEEETTTCCEEEE
T ss_pred -EEeCCCcEEEEECCCCc--eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCce-----EEEEECCCCcccce
Confidence 44678899999987431 1112221 1 3345778999999877665554 43 44443 45666555
Q ss_pred ccc
Q 046018 238 LPL 240 (310)
Q Consensus 238 ~~~ 240 (310)
+..
T Consensus 274 ~~~ 276 (397)
T 1sq9_A 274 LSV 276 (397)
T ss_dssp ECB
T ss_pred ecc
Confidence 543
No 191
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.55 E-value=4.7e-05 Score=67.33 Aligned_cols=164 Identities=10% Similarity=0.107 Sum_probs=101.7
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCC--------------ccccCCcceEEeCCCCEEEEEeC
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAG--------------QPLRFTNDLDIDEHKGVIYFTDS 112 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~--------------~~~~~~~~i~~d~~g~~l~v~~~ 112 (310)
.....+++++ +|+++++.....+..++..+++.......... .....+..++++|+|+ ++++..
T Consensus 65 ~~V~~v~fsp-dg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~s~~ 142 (393)
T 1erj_A 65 SVVCCVKFSN-DGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK-FLATGA 142 (393)
T ss_dssp SCCCEEEECT-TSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS-EEEEEE
T ss_pred CEEEEEEECC-CCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC-EEEEEc
Confidence 3456899999 88877765555577788777764332211000 0011367899999999 444432
Q ss_pred CCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCccee
Q 046018 113 STSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDV 191 (310)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~ 191 (310)
.++.|..||.++++....... ......++++|+++.|+ +...++.|.+||...+. ...
T Consensus 143 -----------------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~v~iwd~~~~~---~~~ 201 (393)
T 1erj_A 143 -----------------EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV-SGSGDRTVRIWDLRTGQ---CSL 201 (393)
T ss_dssp -----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE---EEE
T ss_pred -----------------CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEE-EecCCCcEEEEECCCCe---eEE
Confidence 277899999988876554433 33457899999998555 45677899999987431 111
Q ss_pred eeeCCCCCCeeEECC-CCCEEEEEecCCccceeeeeec-cccccEEeec
Q 046018 192 FAELPGFPDNVRSNS-NGEFWVALHAKKGLFGKLILLN-SWLGKTLLKL 238 (310)
Q Consensus 192 ~~~~~~~p~~i~~d~-~G~l~va~~~~~~~~~~~i~~~-~~~g~~~~~~ 238 (310)
..........+++.+ +|++.++....+. +..+ ...++.+..+
T Consensus 202 ~~~~~~~v~~~~~~~~~~~~l~~~s~d~~-----v~iwd~~~~~~~~~~ 245 (393)
T 1erj_A 202 TLSIEDGVTTVAVSPGDGKYIAAGSLDRA-----VRVWDSETGFLVERL 245 (393)
T ss_dssp EEECSSCEEEEEECSTTCCEEEEEETTSC-----EEEEETTTCCEEEEE
T ss_pred EEEcCCCcEEEEEECCCCCEEEEEcCCCc-----EEEEECCCCcEEEee
Confidence 112223345678887 7887777666554 3343 3445555444
No 192
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.55 E-value=7.4e-06 Score=72.56 Aligned_cols=147 Identities=7% Similarity=-0.066 Sum_probs=92.4
Q ss_pred ceeceEEEeCCCC-cEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 47 GRPLGIRFDKKTG-DLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 47 ~~p~gl~~d~~~g-~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
..+..+++++ ++ +++++... +.|..+|.++++....... ......+..++++|+|+.|+.+.
T Consensus 132 ~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~------------- 195 (402)
T 2aq5_A 132 KRVGIVAWHP-TAQNVLLSAGCDNVILVWDVGTGAAVLTLGP--DVHPDTIYSVDWSRDGALICTSC------------- 195 (402)
T ss_dssp SCEEEEEECS-SBTTEEEEEETTSCEEEEETTTTEEEEEECT--TTCCSCEEEEEECTTSSCEEEEE-------------
T ss_pred CeEEEEEECc-CCCCEEEEEcCCCEEEEEECCCCCccEEEec--CCCCCceEEEEECCCCCEEEEEe-------------
Confidence 5567899999 65 45554444 4588889988865433310 11123568899999999444443
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEe-cCCc--ccceEEEecCCCeEEEEe--cCCceEEEEEccCCCCCcceeee-eCCCC
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILL-QGLA--FANGVALSRDRTFILIAE--TSNCRILRFWLHGPNSGKQDVFA-ELPGF 198 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~-~~~~--~~~gi~~~~d~~~lyv~~--~~~~~i~~~~~~~~~~~~~~~~~-~~~~~ 198 (310)
.++.|..||..+++..... .... .+..++++|+++.|+.+. ..++.|.+||....... ..... .....
T Consensus 196 -----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~ 269 (402)
T 2aq5_A 196 -----RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP-LSLQELDTSSG 269 (402)
T ss_dssp -----TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC-SEEEECCCCSS
T ss_pred -----cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC-ceEEeccCCCc
Confidence 2788999999887765433 2222 267899999987444432 56789999998743211 11111 12234
Q ss_pred CCeeEECCCCCEEEEEe
Q 046018 199 PDNVRSNSNGEFWVALH 215 (310)
Q Consensus 199 p~~i~~d~~G~l~va~~ 215 (310)
...++++++|++.+...
T Consensus 270 v~~~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 270 VLLPFFDPDTNIVYLCG 286 (402)
T ss_dssp CEEEEEETTTTEEEEEE
T ss_pred eeEEEEcCCCCEEEEEE
Confidence 56789999997665433
No 193
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.54 E-value=2.2e-05 Score=68.49 Aligned_cols=146 Identities=10% Similarity=0.057 Sum_probs=90.3
Q ss_pred eeceEEEeCC-CCcEE-EEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 48 RPLGIRFDKK-TGDLY-IADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 48 ~p~gl~~d~~-~g~l~-v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
....+++.+. +|.++ .+...+.|..+|.++++....... ....++.++++|+++ ++++..
T Consensus 198 ~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~----h~~~v~~v~~~p~~~-~l~s~s------------- 259 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET----HESDVNSVRYYPSGD-AFASGS------------- 259 (354)
T ss_dssp CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC----CSSCEEEEEECTTSS-EEEEEE-------------
T ss_pred CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC----CCCCeEEEEEeCCCC-EEEEEe-------------
Confidence 3445666552 34444 444445588899988765433221 123578899999999 555543
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCC---cccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCee
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGL---AFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNV 202 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~---~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i 202 (310)
.++.|..||..+++........ .....++++|+++.|+. ...++.|.+||...+. ....+..-.+....+
T Consensus 260 ----~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~-g~~d~~i~vwd~~~~~--~~~~l~~h~~~v~~l 332 (354)
T 2pbi_B 260 ----DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFA-GYNDYTINVWDVLKGS--RVSILFGHENRVSTL 332 (354)
T ss_dssp ----TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE-EETTSCEEEEETTTCS--EEEEECCCSSCEEEE
T ss_pred ----CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEE-EECCCcEEEEECCCCc--eEEEEECCCCcEEEE
Confidence 2778999998766544333221 23568999999995554 4677899999976331 111221122344678
Q ss_pred EECCCCCEEEEEecCC
Q 046018 203 RSNSNGEFWVALHAKK 218 (310)
Q Consensus 203 ~~d~~G~l~va~~~~~ 218 (310)
+++++|++.++....+
T Consensus 333 ~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 333 RVSPDGTAFCSGSWDH 348 (354)
T ss_dssp EECTTSSCEEEEETTS
T ss_pred EECCCCCEEEEEcCCC
Confidence 9999998777665554
No 194
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.52 E-value=2.5e-05 Score=68.80 Aligned_cols=147 Identities=12% Similarity=0.035 Sum_probs=91.7
Q ss_pred eeceEEEeCCCCcEEEEECCCc-eEEEeCCC-CeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAYLG-FQVVGPEG-GLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~-~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
....+++.+.+++++++....+ |..+|.+. +....... + ....++.++++|+|+ .+++.+.
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~---~-h~~~v~~v~~~p~~~-~l~s~s~------------ 269 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH---G-HEGDINSVKFFPDGQ-RFGTGSD------------ 269 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC---C-CSSCCCEEEECTTSS-EEEEECS------------
T ss_pred CeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC---C-cCCCeEEEEEecCCC-eEEEEcC------------
Confidence 4456777654566666655544 77788763 22211111 1 123578999999999 6666543
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCC--------cccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee---
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGL--------AFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE--- 194 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~--------~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~--- 194 (310)
++.|..||..+++........ .....++++|+++.|+. ...++.|.+||...+.. ...+..
T Consensus 270 -----D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-g~~dg~i~vwd~~~~~~--~~~~~~~~~ 341 (380)
T 3iz6_a 270 -----DGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFA-GYSNGDCYVWDTLLAEM--VLNLGTLQN 341 (380)
T ss_dssp -----SSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEE-ECTTSCEEEEETTTCCE--EEEECCSCS
T ss_pred -----CCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEE-EECCCCEEEEECCCCce--EEEEecccC
Confidence 788999999887654433211 12468999999995554 46789999999763211 111111
Q ss_pred -CCCCCCeeEECCCCCEEEEEecCCc
Q 046018 195 -LPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 195 -~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
-.+....++++++|.+.++....+.
T Consensus 342 ~h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 342 SHEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp SCCCCCCEEEECSSSSEEEEECTTSC
T ss_pred CCCCceEEEEECCCCCEEEEeeCCCC
Confidence 1234567899999988777665554
No 195
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.52 E-value=2.1e-05 Score=70.49 Aligned_cols=152 Identities=9% Similarity=0.085 Sum_probs=94.6
Q ss_pred ceeceEEEeCCCCc-EEEEECCC-ceEEEeCCCCeE--EEE--EeecCCccccCCcceEEeC-CCCEEEEEeCCCchhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYL-GFQVVGPEGGLA--TQL--VTEAAGQPLRFTNDLDIDE-HKGVIYFTDSSTSFQRR 119 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~-gi~~~d~~~~~~--~~~--~~~~~~~~~~~~~~i~~d~-~g~~l~v~~~~~~~~~~ 119 (310)
..+.+|++++ ++. ++++.... .|..++...+.. ..+ ...... ....+.+++++| ++. ++++...
T Consensus 182 ~~v~~l~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~-~l~s~~~------ 252 (430)
T 2xyi_A 182 KEGYGLSWNP-NLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHES-LFGSVAD------ 252 (430)
T ss_dssp SCCCCEEECT-TSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTT-EEEEEET------
T ss_pred CCeEEEEeCC-CCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCC-EEEEEeC------
Confidence 4567899998 555 55555554 488888876321 000 011111 123578899999 566 6666532
Q ss_pred hhhhhhhcCCCCceEEEEeCCCC----eEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC
Q 046018 120 QFMSSILSGDKTGRLLKYEKTTK----EVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL 195 (310)
Q Consensus 120 ~~~~~~~~~~~~g~v~~~d~~~~----~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~ 195 (310)
++.|..||..++ ....+......++.++++|+++.++++...++.|.+||...... ....+...
T Consensus 253 -----------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-~~~~~~~h 320 (430)
T 2xyi_A 253 -----------DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-KLHSFESH 320 (430)
T ss_dssp -----------TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSEEEECC
T ss_pred -----------CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-CeEEeecC
Confidence 788999998765 22223333445789999999987787778889999999874211 12222222
Q ss_pred CCCCCeeEECCCC-CEEEEEecCCc
Q 046018 196 PGFPDNVRSNSNG-EFWVALHAKKG 219 (310)
Q Consensus 196 ~~~p~~i~~d~~G-~l~va~~~~~~ 219 (310)
......+++.++| .++++....+.
T Consensus 321 ~~~v~~i~~sp~~~~~l~s~~~d~~ 345 (430)
T 2xyi_A 321 KDEIFQVQWSPHNETILASSGTDRR 345 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSC
T ss_pred CCCEEEEEECCCCCCEEEEEeCCCc
Confidence 2345778999999 46666655554
No 196
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.50 E-value=1.2e-05 Score=76.83 Aligned_cols=100 Identities=8% Similarity=-0.074 Sum_probs=66.3
Q ss_pred eceEEEeCCCCc-EEEEECC---------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhh
Q 046018 49 PLGIRFDKKTGD-LYIADAY---------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQR 118 (310)
Q Consensus 49 p~gl~~d~~~g~-l~v~~~~---------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~ 118 (310)
+..+++++ +|+ |..+... ..|+.+|.++++.+.+... ......+..++++|||++|.++.
T Consensus 63 v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~~~~SPdG~~la~~~------- 132 (723)
T 1xfd_A 63 AIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPP--EVSNAKLQYAGWGPKGQQLIFIF------- 132 (723)
T ss_dssp CSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCT--TCCSCCCSBCCBCSSTTCEEEEE-------
T ss_pred cceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCC--ccccccccccEECCCCCEEEEEE-------
Confidence 67899999 676 4444332 2377889988876434221 11112367899999998666665
Q ss_pred hhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCc-------------------ccceEEEecCCCeEEEEe
Q 046018 119 RQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLA-------------------FANGVALSRDRTFILIAE 170 (310)
Q Consensus 119 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~-------------------~~~gi~~~~d~~~lyv~~ 170 (310)
.+.|+.+|.++++...+..... ...+++|+|||+.|+++.
T Consensus 133 ------------~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 133 ------------ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp ------------TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred ------------CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 4579999998877665543321 125799999999887764
No 197
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.50 E-value=9.9e-06 Score=71.73 Aligned_cols=147 Identities=9% Similarity=0.023 Sum_probs=93.9
Q ss_pred ceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..+++++ ++. |+.+...+.|..+|.++++....... ......+..++++++++ ++++...
T Consensus 177 ~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~l~~g~~------------ 240 (402)
T 2aq5_A 177 DTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDR--PHEGTRPVHAVFVSEGK-ILTTGFS------------ 240 (402)
T ss_dssp SCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEEC--SSCSSSCCEEEECSTTE-EEEEEEC------------
T ss_pred CceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeecc--CCCCCcceEEEEcCCCc-EEEEecc------------
Confidence 4567899999 665 55554445588899988775433311 11222467899999998 5555310
Q ss_pred hcCCCCceEEEEeCCCCeE--EEE-ecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC--CCCCC
Q 046018 126 LSGDKTGRLLKYEKTTKEV--TIL-LQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL--PGFPD 200 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~--~~~-~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~p~ 200 (310)
...++.|..||..+++. ... .........++++||++.|+++...++.|.+|+...+.. ....+... .....
T Consensus 241 --~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~-~~~~l~~~~~~~~v~ 317 (402)
T 2aq5_A 241 --RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP-FLHYLSMFSSKESQR 317 (402)
T ss_dssp --TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT-CEEEEEEECCSSCCS
T ss_pred --CCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc-ceEeecccccCCccc
Confidence 01378899999876532 111 123345678999999998888877789999999875421 02222222 24467
Q ss_pred eeEECCCCCEEE
Q 046018 201 NVRSNSNGEFWV 212 (310)
Q Consensus 201 ~i~~d~~G~l~v 212 (310)
++++.++|.+.+
T Consensus 318 ~~~~sp~~~~~~ 329 (402)
T 2aq5_A 318 GMGYMPKRGLEV 329 (402)
T ss_dssp EEEECCGGGSCG
T ss_pred ceEEecccccce
Confidence 889988886544
No 198
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.50 E-value=2.8e-05 Score=74.07 Aligned_cols=149 Identities=11% Similarity=0.145 Sum_probs=92.1
Q ss_pred ceeceEEEeCCCCc-EEEEECCC-----ceEEEeCCCC-eEEEEEeecCCccccCCcceEEeC--CCCEEEEEeCCCchh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYL-----GFQVVGPEGG-LATQLVTEAAGQPLRFTNDLDIDE--HKGVIYFTDSSTSFQ 117 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~-----gi~~~d~~~~-~~~~~~~~~~~~~~~~~~~i~~d~--~g~~l~v~~~~~~~~ 117 (310)
..+..+++++ +|+ |+++.... .|+.+|..++ ..+.+..............++++| +|+++|++...
T Consensus 258 ~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~---- 332 (706)
T 2z3z_A 258 KFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD---- 332 (706)
T ss_dssp CEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT----
T ss_pred eeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC----
Confidence 3466899999 665 66654332 4888999988 555443321111111246789999 99855544321
Q ss_pred hhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccce-EEEecCCCeEEEEecCCc----eEEEEEccCCCCCcceee
Q 046018 118 RRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANG-VALSRDRTFILIAETSNC----RILRFWLHGPNSGKQDVF 192 (310)
Q Consensus 118 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~g-i~~~~d~~~lyv~~~~~~----~i~~~~~~~~~~~~~~~~ 192 (310)
....|+.++.+++..+.+......... ++++||++.||++....+ .|++++.+++. ...+
T Consensus 333 ------------g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~l 397 (706)
T 2z3z_A 333 ------------GWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK---TKDL 397 (706)
T ss_dssp ------------SSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC---CEES
T ss_pred ------------CccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC---ceec
Confidence 245688888766655555432222334 799999998988766654 88888876532 2222
Q ss_pred eeCCCCCCeeEECCCCCEEEEEec
Q 046018 193 AELPGFPDNVRSNSNGEFWVALHA 216 (310)
Q Consensus 193 ~~~~~~p~~i~~d~~G~l~va~~~ 216 (310)
.. ......++++++|+.++....
T Consensus 398 ~~-~~~~~~~~~spdg~~l~~~~~ 420 (706)
T 2z3z_A 398 TP-ESGMHRTQLSPDGSAIIDIFQ 420 (706)
T ss_dssp CC-SSSEEEEEECTTSSEEEEEEE
T ss_pred cC-CCceEEEEECCCCCEEEEEec
Confidence 21 123457899999986665443
No 199
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.50 E-value=0.00016 Score=63.28 Aligned_cols=149 Identities=7% Similarity=0.032 Sum_probs=92.5
Q ss_pred ceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeC---CCCEEEEEeCCCchhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDE---HKGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~---~g~~l~v~~~~~~~~~~~~~ 122 (310)
..+..+++.++++. |..+...+.|..+|.++++....... . .....+++.+ ++..++++.
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~----------- 163 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF--E---ETVYSHHMSPVSTKHCLVAVGT----------- 163 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC--S---SCEEEEEECSSCSSCCEEEEEE-----------
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC--C---CceeeeEeecCCCCCcEEEEEc-----------
Confidence 45678999884444 44444444588889988876544332 1 1345566665 555344443
Q ss_pred hhhhcCCCCceEEEEeCCCCeEEEEec-CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceee---------
Q 046018 123 SSILSGDKTGRLLKYEKTTKEVTILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVF--------- 192 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~--------- 192 (310)
.++.|..||..+++...... .......++++|+++.++++...++.|..||....... ...+
T Consensus 164 -------~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~ 235 (408)
T 4a11_B 164 -------RGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC-LITLDQHNGKKSQ 235 (408)
T ss_dssp -------SSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC-SEECCTTTTCSCC
T ss_pred -------CCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc-cccccccccccce
Confidence 36789999987765443332 33446789999999876666678899999998643210 0111
Q ss_pred ------eeCCCCCCeeEECCCCCEEEEEecCCc
Q 046018 193 ------AELPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 193 ------~~~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
.........++++++|+..++....+.
T Consensus 236 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 236 AVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp CTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 001123466899999987776665554
No 200
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.49 E-value=3.1e-05 Score=67.86 Aligned_cols=159 Identities=11% Similarity=0.010 Sum_probs=92.2
Q ss_pred eEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCC--Cchh---hhhhhhhh
Q 046018 51 GIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSS--TSFQ---RRQFMSSI 125 (310)
Q Consensus 51 gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~--~~~~---~~~~~~~~ 125 (310)
+++++++...|+++.....|+++|..+++.+.+...... ........++++|+ ++++... ..+. ........
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~--~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAE--WVGYGTWVANSDCT-KLVGIEIRREDWVPLTDWKKFHEF 161 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT--EEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhh--cccccceeECCCCC-eeccccccCcccccccccchhhhh
Confidence 678999344577776656699999999887655443211 11112234588998 5543210 0000 00001112
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCcccceEEEec-CCCeEEEEecC-----CceEEEEEccCCCCCcceeeeeCC-C-
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSR-DRTFILIAETS-----NCRILRFWLHGPNSGKQDVFAELP-G- 197 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~-d~~~lyv~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~-~- 197 (310)
........|+.+|.++++.+.+.........++++| |++.|+++... ...|+.++.+++.. ..+.... +
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~ 238 (388)
T 3pe7_A 162 YFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM---RKVKTHAEGE 238 (388)
T ss_dssp GGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC---EESCCCCTTE
T ss_pred hccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce---EEeeeCCCCc
Confidence 223345789999999888877665555567899999 99877555433 34899999875422 2222211 1
Q ss_pred CCCeeEECCCCC-EEEEEe
Q 046018 198 FPDNVRSNSNGE-FWVALH 215 (310)
Q Consensus 198 ~p~~i~~d~~G~-l~va~~ 215 (310)
.....++++||+ |++...
T Consensus 239 ~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 239 SCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp EEEEEEECTTSSCEEEEEE
T ss_pred ccccceECCCCCEEEEEec
Confidence 123568999996 644443
No 201
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.49 E-value=3.7e-05 Score=66.74 Aligned_cols=149 Identities=12% Similarity=0.089 Sum_probs=90.6
Q ss_pred eeceEEEeCCCCcEEEEECCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
....+++++ +|++.++.... .|..+|.+++..........+ ....+..++++|+|+ +.++..
T Consensus 18 ~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~g~-~l~s~s-------------- 80 (345)
T 3fm0_A 18 RCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEG-HQRTVRKVAWSPCGN-YLASAS-------------- 80 (345)
T ss_dssp CEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEEEEEEECSS-CSSCEEEEEECTTSS-EEEEEE--------------
T ss_pred cEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccc-cCCcEEEEEECCCCC-EEEEEE--------------
Confidence 456799999 77766555544 477778776653211111111 123578899999999 444432
Q ss_pred cCCCCceEEEEeCCCCeEEEE--ecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC---CCCCC
Q 046018 127 SGDKTGRLLKYEKTTKEVTIL--LQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL---PGFPD 200 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~~~~--~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~p~ 200 (310)
.++.+..|+..++..+.+ ... ......++++|+++. +++.+.++.|.+|+.+.... ......+ .....
T Consensus 81 ---~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~h~~~v~ 154 (345)
T 3fm0_A 81 ---FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL-LATCSRDKSVWVWEVDEEDE--YECVSVLNSHTQDVK 154 (345)
T ss_dssp ---TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEECTTSC--EEEEEEECCCCSCEE
T ss_pred ---CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCE-EEEEECCCeEEEEECCCCCC--eEEEEEecCcCCCeE
Confidence 267788888766544322 222 234578999999985 44556778999999874321 1222211 22346
Q ss_pred eeEECCCCCEEEEEecCCc
Q 046018 201 NVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 201 ~i~~d~~G~l~va~~~~~~ 219 (310)
.+++.++|++.++....+.
T Consensus 155 ~~~~~p~~~~l~s~s~d~~ 173 (345)
T 3fm0_A 155 HVVWHPSQELLASASYDDT 173 (345)
T ss_dssp EEEECSSSSCEEEEETTSC
T ss_pred EEEECCCCCEEEEEeCCCc
Confidence 6889999987666655554
No 202
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.49 E-value=7.3e-05 Score=67.25 Aligned_cols=162 Identities=14% Similarity=0.113 Sum_probs=98.8
Q ss_pred eeceEEEeCCCCcE-EEEECCCc-eEEEeCC--CCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhh
Q 046018 48 RPLGIRFDKKTGDL-YIADAYLG-FQVVGPE--GGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 48 ~p~gl~~d~~~g~l-~v~~~~~g-i~~~d~~--~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~ 123 (310)
.+..+++++ +++. +++....+ |..+|.. ++.......... ....+..++++|+|++|++++
T Consensus 104 ~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~------------ 168 (450)
T 2vdu_B 104 YIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC--FSKRPNAISIAEDDTTVIIAD------------ 168 (450)
T ss_dssp CEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE--CSSCEEEEEECTTSSEEEEEE------------
T ss_pred ceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc--CCCCceEEEEcCCCCEEEEEe------------
Confidence 467899999 6665 45554444 6677766 554433322110 112577899999999666655
Q ss_pred hhhcCCCCceEEEEeCCCCeEE-----EEecCCcccceEEEecC---CCeEEEEecCCceEEEEEccCCCCCcceeee-e
Q 046018 124 SILSGDKTGRLLKYEKTTKEVT-----ILLQGLAFANGVALSRD---RTFILIAETSNCRILRFWLHGPNSGKQDVFA-E 194 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~-----~~~~~~~~~~gi~~~~d---~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~-~ 194 (310)
..+.++.|+..++... .+.........++++|| ++.|+ +...++.|.+|++..+.. ...+. .
T Consensus 169 ------~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~-s~~~d~~i~vwd~~~~~~--~~~~~~~ 239 (450)
T 2vdu_B 169 ------KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFII-TSDRDEHIKISHYPQCFI--VDKWLFG 239 (450)
T ss_dssp ------TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEE-EEETTSCEEEEEESCTTC--EEEECCC
T ss_pred ------CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEE-EEcCCCcEEEEECCCCce--eeeeecC
Confidence 2678999987665432 11122334678999999 77444 446678999999874321 11211 1
Q ss_pred CCCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeecc
Q 046018 195 LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLP 239 (310)
Q Consensus 195 ~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~ 239 (310)
-......++++ +|++.++....+. +..++ ..++.+..+.
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~d~~-----v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGGDDK-----IFAWDWKTGKNLSTFD 279 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEESSSE-----EEEEETTTCCEEEEEE
T ss_pred CCCceEEEEEC-CCCEEEEEeCCCe-----EEEEECCCCcEeeeec
Confidence 22345778999 8987777665554 44443 4566665554
No 203
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.48 E-value=7.4e-05 Score=65.43 Aligned_cols=148 Identities=11% Similarity=0.050 Sum_probs=95.6
Q ss_pred ceeceEEEeCCCC-cEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeC-CCCEEEEEeCCCchhhhhhhh
Q 046018 47 GRPLGIRFDKKTG-DLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDE-HKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 47 ~~p~gl~~d~~~g-~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~~l~v~~~~~~~~~~~~~~ 123 (310)
.....+++++ ++ +++++... +.|..+|..+++........ .....+.+++++| +++ ++++..
T Consensus 74 ~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~-~l~s~~----------- 138 (383)
T 3ei3_B 74 RRVTSLEWHP-THPTTVAVGSKGGDIILWDYDVQNKTSFIQGM--GPGDAITGMKFNQFNTN-QLFVSS----------- 138 (383)
T ss_dssp SCEEEEEECS-SCTTEEEEEEBTSCEEEEETTSTTCEEEECCC--STTCBEEEEEEETTEEE-EEEEEE-----------
T ss_pred CCEEEEEECC-CCCCEEEEEcCCCeEEEEeCCCcccceeeecC--CcCCceeEEEeCCCCCC-EEEEEe-----------
Confidence 4566899999 65 55554444 45888898877654443210 1123577899999 666 444432
Q ss_pred hhhcCCCCceEEEEeCCCCeEEEEecCC---cccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCC
Q 046018 124 SILSGDKTGRLLKYEKTTKEVTILLQGL---AFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPD 200 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~~~~~~~---~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~ 200 (310)
.++.|..||..+.....+.... .....++++|+++.|+.+ ..++.|..||..+. ....+........
T Consensus 139 ------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~---~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 139 ------IRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATG-DSTGRLLLLGLDGH---EIFKEKLHKAKVT 208 (383)
T ss_dssp ------TTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEE-ETTSEEEEEETTSC---EEEEEECSSSCEE
T ss_pred ------CCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEE-CCCCCEEEEECCCC---EEEEeccCCCcEE
Confidence 2788999999876665554322 336789999999955554 67789999998532 1222222234457
Q ss_pred eeEECCCCC-EEEEEecCCc
Q 046018 201 NVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 201 ~i~~d~~G~-l~va~~~~~~ 219 (310)
.++++++|. ++++....+.
T Consensus 209 ~~~~~~~~~~~l~s~~~d~~ 228 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVDAT 228 (383)
T ss_dssp EEEECSSCTTEEEEEETTSE
T ss_pred EEEECCCCCCEEEEEeCCCE
Confidence 799999997 7666665554
No 204
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.48 E-value=0.00014 Score=62.81 Aligned_cols=147 Identities=6% Similarity=-0.025 Sum_probs=90.2
Q ss_pred ceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ ++.+.++....+ |..+|.++++....... ....+..++++|+++ ..++..
T Consensus 77 ~~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~----h~~~v~~v~~sp~~~-~l~s~~------------- 137 (343)
T 2xzm_R 77 HFVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVG----HQSEVYSVAFSPDNR-QILSAG------------- 137 (343)
T ss_dssp SCEEEEEECS-STTEEEEEETTSEEEEEETTSSCEEEEEEC----CCSCEEEEEECSSTT-EEEEEE-------------
T ss_pred CceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcC----CCCcEEEEEECCCCC-EEEEEc-------------
Confidence 3456789998 776665555444 77889887765332221 112467899999999 444432
Q ss_pred hcCCCCceEEEEeCCCCeEEEEec---CCcccceEEEecCCC---------eEEEEecCCceEEEEEccCCCCCcceeee
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQ---GLAFANGVALSRDRT---------FILIAETSNCRILRFWLHGPNSGKQDVFA 193 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~---~~~~~~gi~~~~d~~---------~lyv~~~~~~~i~~~~~~~~~~~~~~~~~ 193 (310)
.++.|..||........... .......++++|+++ .++++...++.|.+||.... ....+.
T Consensus 138 ----~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~ 210 (343)
T 2xzm_R 138 ----AEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ---IRYTFK 210 (343)
T ss_dssp ----TTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTE---EEEEEE
T ss_pred ----CCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCc---eeEEEc
Confidence 27789999987443332221 112246788888762 25555577899999994321 111122
Q ss_pred eCCCCCCeeEECCCCCEEEEEecCCc
Q 046018 194 ELPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 194 ~~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
........++++++|++.++....+.
T Consensus 211 ~h~~~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 211 AHESNVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred CccccceEEEECCCCCEEEEEcCCCe
Confidence 22234567899999987777665554
No 205
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.46 E-value=0.00052 Score=59.17 Aligned_cols=179 Identities=10% Similarity=0.012 Sum_probs=107.5
Q ss_pred CcccccCcEEEEEeCCCCCeEE-EEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCCceEEEeCCCCeE
Q 046018 2 PYTGVADGRILKWQGDELGWTE-FAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLA 80 (310)
Q Consensus 2 ~~~~~~~~~i~~~~~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~ 80 (310)
++++..++.|..|+.....-+. .....+. ...-+|. ++....++.+.+-+....+..++..+++.
T Consensus 51 l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~-------------~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 51 CMCRCEDGALHFTQLKDSKTITTITTPNPR-------------TGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEECCC-------------TTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred EEEECCCCcEEEEECCCCcEEEEEecCCce-------------eeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 3567778888888876654221 1111111 1112233 33333377777777776677778777763
Q ss_pred EEEEeecCCccccCCcceEEeC--CCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecC--Ccccce
Q 046018 81 TQLVTEAAGQPLRFTNDLDIDE--HKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQG--LAFANG 156 (310)
Q Consensus 81 ~~~~~~~~~~~~~~~~~i~~d~--~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~~~g 156 (310)
....... ....+..++++| +++ ++++.. .++.|..||..+++....... ......
T Consensus 117 ~~~~~~~---~~~~v~~~~~~~~~~~~-~l~s~s-----------------~dg~i~~wd~~~~~~~~~~~~~~~~~i~~ 175 (343)
T 3lrv_A 117 LREIEVD---SANEIIYMYGHNEVNTE-YFIWAD-----------------NRGTIGFQSYEDDSQYIVHSAKSDVEYSS 175 (343)
T ss_dssp EEEEECC---CSSCEEEEECCC---CC-EEEEEE-----------------TTCCEEEEESSSSCEEEEECCCSSCCCCE
T ss_pred eEEeecC---CCCCEEEEEcCCCCCCC-EEEEEe-----------------CCCcEEEEECCCCcEEEEEecCCCCceEE
Confidence 2222211 112467899999 999 555443 278899999988776543322 224678
Q ss_pred EEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee-CCCCCCeeEECCCCCEEEEEecC
Q 046018 157 VALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE-LPGFPDNVRSNSNGEFWVALHAK 217 (310)
Q Consensus 157 i~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~l~va~~~~ 217 (310)
++++||++ ++++...++.|.+||...+.... ..+.. -.+....++++++|.+.++...+
T Consensus 176 ~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~l~fs~~g~~l~s~~~~ 235 (343)
T 3lrv_A 176 GVLHKDSL-LLALYSPDGILDVYNLSSPDQAS-SRFPVDEEAKIKEVKFADNGYWMVVECDQ 235 (343)
T ss_dssp EEECTTSC-EEEEECTTSCEEEEESSCTTSCC-EECCCCTTSCEEEEEECTTSSEEEEEESS
T ss_pred EEECCCCC-EEEEEcCCCEEEEEECCCCCCCc-cEEeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 99999998 55555678999999987542210 12221 12345678999999877776654
No 206
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.46 E-value=1.4e-05 Score=70.05 Aligned_cols=150 Identities=9% Similarity=0.046 Sum_probs=93.9
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
..+..+++++ +|++.++....++.+++..++........ ......++.++++|+|+++..+...
T Consensus 177 ~~V~~v~fsp-dg~~l~s~s~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~v~fspdg~~l~~~s~d------------- 240 (365)
T 4h5i_A 177 GEVKDLHFST-DGKVVAYITGSSLEVISTVTGSCIARKTD--FDKNWSLSKINFIADDTVLIAASLK------------- 240 (365)
T ss_dssp SCCCEEEECT-TSSEEEEECSSCEEEEETTTCCEEEEECC--CCTTEEEEEEEEEETTEEEEEEEES-------------
T ss_pred CceEEEEEcc-CCceEEeccceeEEEEEeccCcceeeeec--CCCCCCEEEEEEcCCCCEEEEEecC-------------
Confidence 4566899999 88887777777788888776654322111 1112246789999999944443321
Q ss_pred cCCCCceEEEEeCCCCeEEE-----EecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee-CC---C
Q 046018 127 SGDKTGRLLKYEKTTKEVTI-----LLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE-LP---G 197 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~~~-----~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~---~ 197 (310)
+.....+..|+........ +.........++++||+++| ++.+.++.|.+||...+ +.+.. +. .
T Consensus 241 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~l-asgs~D~~V~iwd~~~~-----~~~~~~~~gH~~ 313 (365)
T 4h5i_A 241 -KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELA-VLASNDNSIALVKLKDL-----SMSKIFKQAHSF 313 (365)
T ss_dssp -SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEE-EEEETTSCEEEEETTTT-----EEEEEETTSSSS
T ss_pred -CcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCce-EEEcCCCEEEEEECCCC-----cEEEEecCcccC
Confidence 0112256777765554332 12223345789999999954 44567789999997643 22222 22 3
Q ss_pred CCCeeEECCCCCEEEEEecCCc
Q 046018 198 FPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 198 ~p~~i~~d~~G~l~va~~~~~~ 219 (310)
....++++|||++.++....+.
T Consensus 314 ~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 314 AITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSE
T ss_pred CEEEEEECCCCCEEEEEeCCCe
Confidence 3467999999998887776664
No 207
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.46 E-value=8e-06 Score=71.37 Aligned_cols=151 Identities=7% Similarity=-0.063 Sum_probs=83.9
Q ss_pred ceeceEEEeCCCCc-EEEEECCCceEEEeCCCCe-EEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGL-ATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~-~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
.....+++++ +++ |..+...+.|..+|.+++. ....... .. ....+..++++|+++.|+.+.
T Consensus 56 ~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~------------- 119 (377)
T 3dwl_C 56 KIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVL-LR-LNRAATFVRWSPNEDKFAVGS------------- 119 (377)
T ss_dssp SCEEEEEECT-TTCCEEEEETTSSEEEC------CCCCEEEC-CC-CSSCEEEEECCTTSSCCEEEE-------------
T ss_pred ceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCceeeeeEe-cc-cCCceEEEEECCCCCEEEEEe-------------
Confidence 5567899999 555 4444444458888887665 1111111 11 123567899999998444444
Q ss_pred hhcCCCCceEEEEeCCCCe----EEEEec-CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCc-----------
Q 046018 125 ILSGDKTGRLLKYEKTTKE----VTILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGK----------- 188 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~----~~~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~----------- 188 (310)
.++.|..||.++++ ...+.. .......++++|+++.|+. ...++.|..|+........
T Consensus 120 -----~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 193 (377)
T 3dwl_C 120 -----GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA-GCADRKAYVLSAYVRDVDAKPEASVWGSRL 193 (377)
T ss_dssp -----SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE-EESSSCEEEEEECCSSCC-CCCSCSSCSCC
T ss_pred -----cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE-EeCCCEEEEEEEEecccCCCcccccccccc
Confidence 26778999987664 233332 2344678999999985554 4667899999985321100
Q ss_pred --ceeeeeC--CCCCCeeEECCCCCEEEEEecCCc
Q 046018 189 --QDVFAEL--PGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 189 --~~~~~~~--~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
....... .+....++++++|++.++....+.
T Consensus 194 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~ 228 (377)
T 3dwl_C 194 PFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSS 228 (377)
T ss_dssp CEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTE
T ss_pred chhhhhhcccCCceEEEEEECCCCCEEEEEeCCCc
Confidence 1111111 123467899999986666555554
No 208
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.44 E-value=1.4e-05 Score=70.75 Aligned_cols=147 Identities=10% Similarity=0.093 Sum_probs=91.4
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +++++++... +.|..+|.++++....... ....+.+++++|+++ .+++..
T Consensus 140 ~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~----h~~~v~~~~~~~~~~-~l~s~~------------- 200 (420)
T 3vl1_A 140 SEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIG----HRATVTDIAIIDRGR-NVLSAS------------- 200 (420)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEEC----CSSCEEEEEEETTTT-EEEEEE-------------
T ss_pred CccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcC----CCCcEEEEEEcCCCC-EEEEEc-------------
Confidence 5667899999 6655444444 4588889887654332221 122467899999999 444432
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCC-------------------------cccceEEEecCCCeEEEEecCCceEEEEE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGL-------------------------AFANGVALSRDRTFILIAETSNCRILRFW 180 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~-------------------------~~~~gi~~~~d~~~lyv~~~~~~~i~~~~ 180 (310)
.++.|..||..+++........ .....++++|+++.|+. ...++.|.+||
T Consensus 201 ----~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~i~d 275 (420)
T 3vl1_A 201 ----LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA-GHVSGVITVHN 275 (420)
T ss_dssp ----TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE-EETTSCEEEEE
T ss_pred ----CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE-EcCCCeEEEEE
Confidence 2678999998877655433211 22345677888885554 46778999999
Q ss_pred ccCCCCCcceeeee-CCCCCCeeEECCCCC-EEEEEecCCc
Q 046018 181 LHGPNSGKQDVFAE-LPGFPDNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 181 ~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~-l~va~~~~~~ 219 (310)
...+. ....+.. .......++++++|. +.++....+.
T Consensus 276 ~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~ 314 (420)
T 3vl1_A 276 VFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM 314 (420)
T ss_dssp TTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred CCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe
Confidence 87431 1111111 123456789999997 6666555554
No 209
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.44 E-value=0.0002 Score=64.31 Aligned_cols=173 Identities=10% Similarity=0.029 Sum_probs=98.9
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEe--CCCCEEEEEeCCCchhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDID--EHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d--~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
..+..+++.+ ++.|..+...+.|..+|.++++....... ....+..+++. ++++ +.++..
T Consensus 163 ~~V~~l~~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~-~l~s~s------------ 224 (464)
T 3v7d_B 163 GGVWALKYAH-GGILVSGSTDRTVRVWDIKKGCCTHVFEG----HNSTVRCLDIVEYKNIK-YIVTGS------------ 224 (464)
T ss_dssp SCEEEEEECS-TTEEEEEETTSCEEEEETTTTEEEEEECC----CSSCEEEEEEEESSSCE-EEEEEE------------
T ss_pred cCEEEEEEcC-CCEEEEEeCCCCEEEEECCCCcEEEEECC----CCCccEEEEEecCCCCC-EEEEEc------------
Confidence 4566888887 66666665555688899988875433321 11245667776 5667 444432
Q ss_pred hhcCCCCceEEEEeCCCCeEEEE----------------------ecCCcccceEEEecCCCeEEEEecCCceEEEEEcc
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTIL----------------------LQGLAFANGVALSRDRTFILIAETSNCRILRFWLH 182 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~----------------------~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~ 182 (310)
.++.|..||..++..... ........-.+++++++.++.+ ..++.|..||..
T Consensus 225 -----~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~-~~d~~i~vwd~~ 298 (464)
T 3v7d_B 225 -----RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSG-SYDNTLIVWDVA 298 (464)
T ss_dssp -----TTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEE-ETTSCEEEEETT
T ss_pred -----CCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEE-eCCCeEEEEECC
Confidence 267788888765532110 0011112234567888855554 677899999986
Q ss_pred CCCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeeccchhhhhccccc
Q 046018 183 GPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPLSFRQLHSLLV 250 (310)
Q Consensus 183 ~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~~~~~~~~~~~ 250 (310)
... ....+.........++++++|+..++....+. +..++ ..++.+..+......+..+.+
T Consensus 299 ~~~--~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~-----i~vwd~~~~~~~~~~~~h~~~v~~~~~ 360 (464)
T 3v7d_B 299 QMK--CLYILSGHTDRIYSTIYDHERKRCISASMDTT-----IRIWDLENGELMYTLQGHTALVGLLRL 360 (464)
T ss_dssp TTE--EEEEECCCSSCEEEEEEETTTTEEEEEETTSC-----EEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CCc--EEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc-----EEEEECCCCcEEEEEeCCCCcEEEEEE
Confidence 421 11112112233467899999987777666565 44444 456666665443333333333
No 210
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.44 E-value=9e-06 Score=71.05 Aligned_cols=151 Identities=13% Similarity=0.058 Sum_probs=87.2
Q ss_pred ceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +++++++....+ |..+|.+++....+... .+ ....+..++++|+++ ++++..
T Consensus 12 ~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~-h~~~v~~~~~s~~~~-~l~s~s------------- 74 (377)
T 3dwl_C 12 KPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTF-SD-HDKIVTCVDWAPKSN-RIVTCS------------- 74 (377)
T ss_dssp SCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCB-CC-CSSCEEEEEECTTTC-CEEEEE-------------
T ss_pred CcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEE-ec-CCceEEEEEEeCCCC-EEEEEe-------------
Confidence 4566799999 777666554444 77777776632222111 11 123568899999998 444432
Q ss_pred hcCCCCceEEEEeCCCCe----EEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCC-Ccceeeee-CCCCC
Q 046018 126 LSGDKTGRLLKYEKTTKE----VTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNS-GKQDVFAE-LPGFP 199 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~----~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~-~~~~~~~~-~~~~p 199 (310)
.++.|..||..+++ ...+.........++++|+++.|+.+ ..++.|.+|+.+.... .....+.. .....
T Consensus 75 ----~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v 149 (377)
T 3dwl_C 75 ----QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVG-SGARVISVCYFEQENDWWVSKHLKRPLRSTI 149 (377)
T ss_dssp ----TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEE-ESSSCEEECCC-----CCCCEEECSSCCSCE
T ss_pred ----CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEE-ecCCeEEEEEECCcccceeeeEeecccCCCe
Confidence 26789999987765 22222333446789999999866555 5678999998875321 01122222 22345
Q ss_pred CeeEECCCCCEEEEEecCCc
Q 046018 200 DNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 200 ~~i~~d~~G~l~va~~~~~~ 219 (310)
..++++++|++.++....+.
T Consensus 150 ~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 150 LSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp EEEEECTTSSEEEEEESSSC
T ss_pred EEEEEcCCCCEEEEEeCCCE
Confidence 67899999987776655554
No 211
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.43 E-value=9.4e-06 Score=71.73 Aligned_cols=167 Identities=11% Similarity=0.045 Sum_probs=97.5
Q ss_pred ceeceEEEeCCCCc-EEEEE----------CCC-ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCC
Q 046018 47 GRPLGIRFDKKTGD-LYIAD----------AYL-GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSST 114 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~----------~~~-gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~ 114 (310)
..+..+++++ +|+ ++++. ... .|..+|..++......... .....+..+++++++++|..+.
T Consensus 13 ~~v~~~~~sp-~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~--- 86 (416)
T 2pm9_A 13 SRTATFAWSH-DKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL--QVDSKFNDLDWSHNNKIIAGAL--- 86 (416)
T ss_dssp EESCBCCBCS-SSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC--CCSSCEEEEEECSSSSCEEEEE---
T ss_pred hhcceEeeCC-CCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE--ecCCceEEEEECCCCCeEEEEc---
Confidence 3455788888 665 55554 222 3777887765421111110 1123577899999999444443
Q ss_pred chhhhhhhhhhhcCCCCceEEEEeCCC----C-eEEEEecCCcccceEEEecC-CCeEEEEecCCceEEEEEccCCCCC-
Q 046018 115 SFQRRQFMSSILSGDKTGRLLKYEKTT----K-EVTILLQGLAFANGVALSRD-RTFILIAETSNCRILRFWLHGPNSG- 187 (310)
Q Consensus 115 ~~~~~~~~~~~~~~~~~g~v~~~d~~~----~-~~~~~~~~~~~~~gi~~~~d-~~~lyv~~~~~~~i~~~~~~~~~~~- 187 (310)
.++.|..|+..+ . ....+.........++++|+ ++ ++++...++.|.+|+.......
T Consensus 87 ---------------~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~ 150 (416)
T 2pm9_A 87 ---------------DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDN-VLASGGNNGEIFIWDMNKCTESP 150 (416)
T ss_dssp ---------------SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTT-BEEEECSSSCEEBCBTTTTSSCT
T ss_pred ---------------cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCC-EEEEEcCCCeEEEEECCCCcccc
Confidence 267899999876 2 23333333345688999998 66 5555577889999998754210
Q ss_pred ---cceee---eeCCCCCCeeEECCC-CCEEEEEecCCccceeeeeecc-ccccEEeeccc
Q 046018 188 ---KQDVF---AELPGFPDNVRSNSN-GEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPL 240 (310)
Q Consensus 188 ---~~~~~---~~~~~~p~~i~~d~~-G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~ 240 (310)
..... .........++++++ ++++++....+. +..++ ..++.+..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-----v~iwd~~~~~~~~~~~~ 206 (416)
T 2pm9_A 151 SNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNF-----ASIWDLKAKKEVIHLSY 206 (416)
T ss_dssp TTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSC-----EEEEETTTTEEEEEECC
T ss_pred ccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCC-----EEEEECCCCCcceEEec
Confidence 01111 112234578999998 577777666554 44443 45555555443
No 212
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.41 E-value=3.8e-05 Score=67.43 Aligned_cols=150 Identities=15% Similarity=0.091 Sum_probs=91.3
Q ss_pred ceeceEEEe----CCCCc--EEEEECCCceEEEeCCC------CeE-E-----EEEe--ecCCccccCCcceEEeCCCCE
Q 046018 47 GRPLGIRFD----KKTGD--LYIADAYLGFQVVGPEG------GLA-T-----QLVT--EAAGQPLRFTNDLDIDEHKGV 106 (310)
Q Consensus 47 ~~p~gl~~d----~~~g~--l~v~~~~~gi~~~d~~~------~~~-~-----~~~~--~~~~~~~~~~~~i~~d~~g~~ 106 (310)
..+..++++ + ++. |+++...+.|..+|.++ ++. . .+.. .........+..+++++++ .
T Consensus 122 ~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 199 (397)
T 1sq9_A 122 HSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L 199 (397)
T ss_dssp SCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E
T ss_pred CcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e
Confidence 556789999 8 555 44444444577777665 221 1 1211 0001122357899999999 5
Q ss_pred EEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecC-------CcccceEEEecCCCeEEEEecCC---ceE
Q 046018 107 IYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQG-------LAFANGVALSRDRTFILIAETSN---CRI 176 (310)
Q Consensus 107 l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-------~~~~~gi~~~~d~~~lyv~~~~~---~~i 176 (310)
++++. .++.|..||..+++....... ......++++|+++.|+.+ ..+ +.|
T Consensus 200 l~~~~------------------~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~-~~d~~~g~i 260 (397)
T 1sq9_A 200 IATGF------------------NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIA-HDSNSFGCI 260 (397)
T ss_dssp EEEEC------------------TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEE-EEETTEEEE
T ss_pred EEEEe------------------CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEE-ecCCCCceE
Confidence 66654 378899999987766544443 4456899999999965554 556 799
Q ss_pred EEEEccCCCCCcceeeee-------------CCCCCCeeEECCCCCEEEEEecCCc
Q 046018 177 LRFWLHGPNSGKQDVFAE-------------LPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~-------------~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
.+||..... ....+.. .......++++++|++.++....+.
T Consensus 261 ~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 314 (397)
T 1sq9_A 261 TLYETEFGE--RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK 314 (397)
T ss_dssp EEEETTTCC--EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSE
T ss_pred EEEECCCCc--ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCe
Confidence 999987431 1112211 1223467899999987777665554
No 213
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.41 E-value=2.7e-05 Score=67.13 Aligned_cols=147 Identities=8% Similarity=0.024 Sum_probs=85.2
Q ss_pred EEeCCCCcEEEEEC-CCceEEEeCCCCe-EEEEEeecCCccccCCcceE----EeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 53 RFDKKTGDLYIADA-YLGFQVVGPEGGL-ATQLVTEAAGQPLRFTNDLD----IDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 53 ~~d~~~g~l~v~~~-~~gi~~~d~~~~~-~~~~~~~~~~~~~~~~~~i~----~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
++++ +++++++.. .+.|..+|.+++. .........+........++ ++++++.++++.
T Consensus 124 ~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~--------------- 187 (357)
T 3i2n_A 124 GIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY--------------- 187 (357)
T ss_dssp GCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE---------------
T ss_pred ccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc---------------
Confidence 3456 555444444 4458888888764 22222211121122445566 568998444443
Q ss_pred cCCCCceEEEEeCCCCeEEEEecCCcccceEEEec---CCCeEEEEecCCceEEEEEccCCCCCc-cee--eeeCCCCCC
Q 046018 127 SGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSR---DRTFILIAETSNCRILRFWLHGPNSGK-QDV--FAELPGFPD 200 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~---d~~~lyv~~~~~~~i~~~~~~~~~~~~-~~~--~~~~~~~p~ 200 (310)
.++.|..||..+++.............++++| +++.++++ ..++.|..|+........ ... +........
T Consensus 188 ---~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~ 263 (357)
T 3i2n_A 188 ---DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVW 263 (357)
T ss_dssp ---TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEE
T ss_pred ---cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEE
Confidence 26789999998887755444445678999999 88865555 677899999987432111 111 111223456
Q ss_pred eeEECCCCC-EEEEEecCCc
Q 046018 201 NVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 201 ~i~~d~~G~-l~va~~~~~~ 219 (310)
.+++.++|. ++++....+.
T Consensus 264 ~~~~~~~~~~~l~~~~~dg~ 283 (357)
T 3i2n_A 264 QVRHLPQNRELFLTAGGAGG 283 (357)
T ss_dssp EEEEETTEEEEEEEEETTSE
T ss_pred EEEECCCCCcEEEEEeCCCc
Confidence 788999997 5555544443
No 214
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.39 E-value=1.5e-05 Score=71.49 Aligned_cols=152 Identities=11% Similarity=-0.004 Sum_probs=97.7
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCe---EEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGL---ATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~---~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~ 122 (310)
..+..+++++.++.++++.... .|..+|.+++. ....... ....++.|+++|++.+++++..
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~----~~~~v~~i~~~p~~~~~l~tg~---------- 297 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA----HTAEVNCLSFNPYSEFILATGS---------- 297 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC----CSSCEEEEEECSSCTTEEEEEE----------
T ss_pred CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec----CCCCeEEEEeCCCCCCEEEEEe----------
Confidence 4577899988556677665554 48888887652 1111111 1235789999999874565543
Q ss_pred hhhhcCCCCceEEEEeCCCC-e-EEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCC-C--------ccee
Q 046018 123 SSILSGDKTGRLLKYEKTTK-E-VTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNS-G--------KQDV 191 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~-~-~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~-~--------~~~~ 191 (310)
.++.|..||..+. . ...+.........++++|+++.++++...+++|.+|+...... . ....
T Consensus 298 -------~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 370 (430)
T 2xyi_A 298 -------ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPEL 370 (430)
T ss_dssp -------TTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTE
T ss_pred -------CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcce
Confidence 2788999998652 2 3333333445688999999987888878889999999874211 0 0122
Q ss_pred eeeC---CCCCCeeEECCCCC-EEEEEecCCc
Q 046018 192 FAEL---PGFPDNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 192 ~~~~---~~~p~~i~~d~~G~-l~va~~~~~~ 219 (310)
+... ...+..+++++++. ++++....+.
T Consensus 371 ~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~ 402 (430)
T 2xyi_A 371 LFIHGGHTAKISDFSWNPNEPWIICSVSEDNI 402 (430)
T ss_dssp EEECCCCSSCEEEEEECSSSTTEEEEEETTSE
T ss_pred EEEcCCCCCCceEEEECCCCCCEEEEEECCCC
Confidence 2221 23467899999998 7777666554
No 215
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.39 E-value=5.3e-05 Score=66.38 Aligned_cols=154 Identities=14% Similarity=0.167 Sum_probs=101.0
Q ss_pred eeceEEEe-CC------CCcEEEEECC-CceEEEeCCCCeEEEEEeec--C---------Ccc---ccCCcceEEeCC--
Q 046018 48 RPLGIRFD-KK------TGDLYIADAY-LGFQVVGPEGGLATQLVTEA--A---------GQP---LRFTNDLDIDEH-- 103 (310)
Q Consensus 48 ~p~gl~~d-~~------~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~--~---------~~~---~~~~~~i~~d~~-- 103 (310)
....|++| .+ ++.+|+++.. .+|.++|..+++..++.... . +.. .....+|+++|+
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~ 232 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDS 232 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCT
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcC
Confidence 45578898 21 4679999986 47999999998877665321 1 111 135778999998
Q ss_pred --CCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEe------CC-CCeEEEEecCCcccc--eEEEecCCCeEEEEecC
Q 046018 104 --KGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYE------KT-TKEVTILLQGLAFAN--GVALSRDRTFILIAETS 172 (310)
Q Consensus 104 --g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d------~~-~~~~~~~~~~~~~~~--gi~~~~d~~~lyv~~~~ 172 (310)
+++||+.... ...++++. .. ...++.+........ ++++++....||+++..
T Consensus 233 ~~~~~LYf~pls-----------------s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~ 295 (381)
T 3q6k_A 233 EGNRPAYYLAGS-----------------AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEAN 295 (381)
T ss_dssp TSCCEEEEEESS-----------------CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESS
T ss_pred CCCeEEEEEECC-----------------CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEecc
Confidence 7889998754 22455543 10 123444444432233 56676333459999999
Q ss_pred CceEEEEEccC-CC-CCcceeeeeCC--CCCCeeEECCCCCEEEEEecCC
Q 046018 173 NCRILRFWLHG-PN-SGKQDVFAELP--GFPDNVRSNSNGEFWVALHAKK 218 (310)
Q Consensus 173 ~~~i~~~~~~~-~~-~~~~~~~~~~~--~~p~~i~~d~~G~l~va~~~~~ 218 (310)
++.|.+|++++ .. ......+...+ .+|+++.+|.+|.||+..++-.
T Consensus 296 ~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~l~ 345 (381)
T 3q6k_A 296 TKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNGFP 345 (381)
T ss_dssp SSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECSCC
T ss_pred CCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEECcch
Confidence 99999999875 21 12334444432 4799999999999999987643
No 216
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.38 E-value=0.00017 Score=62.05 Aligned_cols=151 Identities=10% Similarity=0.071 Sum_probs=85.4
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
.....+++++ + .|..+...+.|..+|.+++..+.+...........++.++++|+++ +.++...
T Consensus 15 ~~v~~~~~s~-~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~------------- 78 (330)
T 2hes_X 15 EKIWSFDFSQ-G-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS-LLAAGSF------------- 78 (330)
T ss_dssp SCEEEEEEET-T-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS-EEEEEET-------------
T ss_pred CceeeeccCC-C-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC-EEEEEeC-------------
Confidence 3455678877 4 4444444444777787765322221111111123578899999999 5555432
Q ss_pred cCCCCceEEEEeCCCC-------eEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC---
Q 046018 127 SGDKTGRLLKYEKTTK-------EVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL--- 195 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~-------~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~--- 195 (310)
++.|..|+.+.. +......+ ......++++|+++.| ++.+.++.|.+|+.+.... .......+
T Consensus 79 ----D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l-as~s~D~~v~iwd~~~~~~-~~~~~~~~~~h 152 (330)
T 2hes_X 79 ----DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYL-ATCSRDKSVWIWETDESGE-EYECISVLQEH 152 (330)
T ss_dssp ----TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEE-EEEETTSCEEEEECCTTCC-CCEEEEEECCC
T ss_pred ----CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEE-EEEeCCCEEEEEeccCCCC-CeEEEEEeccC
Confidence 677888887432 11111222 2335789999999854 4556788999999842111 11222222
Q ss_pred CCCCCeeEECCCCCEEEEEecCCc
Q 046018 196 PGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 196 ~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
......++++++|++.++....+.
T Consensus 153 ~~~v~~v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 153 SQDVKHVIWHPSEALLASSSYDDT 176 (330)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSC
T ss_pred CCceEEEEECCCCCEEEEEcCCCe
Confidence 233467899999988777766554
No 217
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.38 E-value=6.6e-05 Score=69.79 Aligned_cols=162 Identities=7% Similarity=-0.047 Sum_probs=95.7
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCC----eEEEEEeecCCccccC-CcceEEeC--CCCEEEEEeCCCchhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGG----LATQLVTEAAGQPLRF-TNDLDIDE--HKGVIYFTDSSTSFQRR 119 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~----~~~~~~~~~~~~~~~~-~~~i~~d~--~g~~l~v~~~~~~~~~~ 119 (310)
+.+..+++++ +|+++++...+.|..++.+++ +....... .... +..++++| ++++|+.+.
T Consensus 19 ~~v~~~~~sp-dg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~----h~~~~v~~~~~sp~~~~~~l~s~~-------- 85 (615)
T 1pgu_A 19 NFTTHLSYDP-TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTG----HGSSVVTTVKFSPIKGSQYLCSGD-------- 85 (615)
T ss_dssp TCCCCCEEET-TTTEEEEEETTEEEEEECCSSCCSSCSEEEECT----TTTSCEEEEEECSSTTCCEEEEEE--------
T ss_pred CceeEEEECC-CCCEEEEecCCeEEEEECCCCCCccccceEEec----CCCceEEEEEECcCCCCCEEEEec--------
Confidence 5677899999 776555544555888888766 43222221 1124 68899999 999444443
Q ss_pred hhhhhhhcCCCCceEEEEeCCCC------eEEE---EecCCcccceEEEecCCCeEEEEecCC---ceEEEEEccCCCCC
Q 046018 120 QFMSSILSGDKTGRLLKYEKTTK------EVTI---LLQGLAFANGVALSRDRTFILIAETSN---CRILRFWLHGPNSG 187 (310)
Q Consensus 120 ~~~~~~~~~~~~g~v~~~d~~~~------~~~~---~~~~~~~~~gi~~~~d~~~lyv~~~~~---~~i~~~~~~~~~~~ 187 (310)
.++.|..||..++ ..+. +.........++++||++.|+++.... +.|+.|+.. .
T Consensus 86 ----------~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~-~--- 151 (615)
T 1pgu_A 86 ----------ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG-N--- 151 (615)
T ss_dssp ----------TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC-C---
T ss_pred ----------CCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC-C---
Confidence 2678888988544 2222 222334468899999999777664432 577777621 1
Q ss_pred cceeeeeCCCCCCeeEECCCCC-EEEEEecCCccceeeeeec-cccccEEeeccc
Q 046018 188 KQDVFAELPGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLN-SWLGKTLLKLPL 240 (310)
Q Consensus 188 ~~~~~~~~~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~-~~~g~~~~~~~~ 240 (310)
....+.........+++.++|. +.++....+. +..+ ...++.+..+..
T Consensus 152 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-----v~vwd~~~~~~~~~~~~ 201 (615)
T 1pgu_A 152 SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGS-----VVFYQGPPFKFSASDRT 201 (615)
T ss_dssp EEEECCSCSSCEEEEEECSSSSCEEEEEETTTE-----EEEEETTTBEEEEEECS
T ss_pred cceeeecCCccEEEEEECCCCCcEEEEEeCCCc-----EEEEeCCCcceeeeecc
Confidence 1111211223456789999996 5555555444 3333 345555555543
No 218
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.36 E-value=0.00017 Score=68.72 Aligned_cols=146 Identities=10% Similarity=0.072 Sum_probs=91.8
Q ss_pred ceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCC--CEEEEEeCCCchhhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHK--GVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g--~~l~v~~~~~~~~~~~~~~ 123 (310)
.....+++++ +++ |..+...+.|..+|..+.....+.... ......+..++++|++ . +.++.+
T Consensus 473 ~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~-~l~s~s----------- 538 (694)
T 3dm0_A 473 KDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGG-EGHRDWVSCVRFSPNTLQP-TIVSAS----------- 538 (694)
T ss_dssp SCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSST-TSCSSCEEEEEECSCSSSC-EEEEEE-----------
T ss_pred CCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCC-CCCCCcEEEEEEeCCCCcc-eEEEEe-----------
Confidence 4566899999 555 444444445888887765433222111 1112246788898886 4 444432
Q ss_pred hhhcCCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee--CCCCCC
Q 046018 124 SILSGDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE--LPGFPD 200 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p~ 200 (310)
.++.|..||..+++....... ......++++||++ ++++.+.++.|.+||...+ ..+.. ......
T Consensus 539 ------~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~~-----~~~~~~~~~~~v~ 606 (694)
T 3dm0_A 539 ------WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEG-----KKLYSLEANSVIH 606 (694)
T ss_dssp ------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTTT-----EEEECCBCSSCEE
T ss_pred ------CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCC-----ceEEEecCCCcEE
Confidence 277899999987766544333 33467899999998 5555577889999998643 11111 123346
Q ss_pred eeEECCCCCEEEEEecCC
Q 046018 201 NVRSNSNGEFWVALHAKK 218 (310)
Q Consensus 201 ~i~~d~~G~l~va~~~~~ 218 (310)
.+++++++.+.++.....
T Consensus 607 ~~~~sp~~~~l~~~~~~~ 624 (694)
T 3dm0_A 607 ALCFSPNRYWLCAATEHG 624 (694)
T ss_dssp EEEECSSSSEEEEEETTE
T ss_pred EEEEcCCCcEEEEEcCCC
Confidence 789999998777765544
No 219
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.36 E-value=0.00036 Score=58.70 Aligned_cols=221 Identities=14% Similarity=0.070 Sum_probs=111.8
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeE-EEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLA-TQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~-~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
.....+++++ ++.++++... +.|..++...... ..+... .. ....+..+++ +++.++.+.
T Consensus 60 ~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~-~~-~~~~i~~~~~--~~~~l~~~~------------- 121 (313)
T 3odt_A 60 GFLNSVCYDS-EKELLLFGGKDTMINGVPLFATSGEDPLYTL-IG-HQGNVCSLSF--QDGVVISGS------------- 121 (313)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSCEEEEETTCCTTSCC-CEE-CC-CSSCEEEEEE--ETTEEEEEE-------------
T ss_pred ccEEEEEECC-CCCEEEEecCCCeEEEEEeeecCCCCcccch-hh-cccCEEEEEe--cCCEEEEEe-------------
Confidence 4566899999 6655444444 4466666543311 011111 11 1123456666 456344444
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEec-CCCeEEEEecCCceEEEEEccCCCCCcceeeee-CCCCCCee
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSR-DRTFILIAETSNCRILRFWLHGPNSGKQDVFAE-LPGFPDNV 202 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~-d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i 202 (310)
.++.|..||.. .....+.........+++.+ +++.++ +...++.|..||... ....+.. .......+
T Consensus 122 -----~d~~i~~~d~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~----~~~~~~~~~~~~i~~~ 190 (313)
T 3odt_A 122 -----WDKTAKVWKEG-SLVYNLQAHNASVWDAKVVSFSENKFL-TASADKTIKLWQNDK----VIKTFSGIHNDVVRHL 190 (313)
T ss_dssp -----TTSEEEEEETT-EEEEEEECCSSCEEEEEEEETTTTEEE-EEETTSCEEEEETTE----EEEEECSSCSSCEEEE
T ss_pred -----CCCCEEEEcCC-cEEEecccCCCceeEEEEccCCCCEEE-EEECCCCEEEEecCc----eEEEEeccCcccEEEE
Confidence 27789999932 23333333344456788888 777555 446778999998321 1122222 22345678
Q ss_pred EECCCCCEEEEEecCCccceeeeeecc-ccccEEeeccchhhhhcccccCCCC-------ceEEEEECC-CCCEEEEEEc
Q 046018 203 RSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPLSFRQLHSLLVGGKP-------HATAIKLSE-KGEVLEVLED 273 (310)
Q Consensus 203 ~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d~-~g~~~~~~~~ 273 (310)
++.++|.++++... +. +..++ ..++.+..+........++.+.... ...+..+|. +++.+..+..
T Consensus 191 ~~~~~~~~~~~~~d-g~-----i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 264 (313)
T 3odt_A 191 AVVDDGHFISCSND-GL-----IKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITL 264 (313)
T ss_dssp EEEETTEEEEEETT-SE-----EEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEEC
T ss_pred EEcCCCeEEEccCC-Ce-----EEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEec
Confidence 88899985555444 33 44443 4455555543332223333333222 112222332 2444444433
Q ss_pred CCCCeecceeEEEEe-CCEEEEecCCCCeEEEecc
Q 046018 274 CEGKTLSFISEVEEK-DGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 274 ~~g~~~~~~~~~~~~-~g~l~vgs~~~~~i~~~~~ 307 (310)
+. ..+..+... ++++..++. +..|.+++.
T Consensus 265 ~~----~~i~~~~~~~~~~~~~~~~-dg~i~iw~~ 294 (313)
T 3odt_A 265 PA----ISIWSVDCMSNGDIIVGSS-DNLVRIFSQ 294 (313)
T ss_dssp SS----SCEEEEEECTTSCEEEEET-TSCEEEEES
T ss_pred cC----ceEEEEEEccCCCEEEEeC-CCcEEEEeC
Confidence 22 124455443 567666655 667887765
No 220
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.36 E-value=0.00025 Score=72.01 Aligned_cols=112 Identities=12% Similarity=0.024 Sum_probs=78.0
Q ss_pred eeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhc
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILS 127 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~ 127 (310)
.+..+++++ +|...++...+.+..+|..++........ .....+..++++|+++ +.++..
T Consensus 800 ~v~~~~~s~-dg~~l~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~v~~~~~sp~~~-~l~~~~--------------- 859 (1249)
T 3sfz_A 800 IVKCCSWSA-DGDKIIVAAKNKVLLFDIHTSGLLAEIHT---GHHSTIQYCDFSPYDH-LAVIAL--------------- 859 (1249)
T ss_dssp CBCCCCBCT-TSSEEEEEETTEEEEEETTTCCEEEEEEC---SSSSCCCEEEECSSTT-EEEEEC---------------
T ss_pred eEEEEEECC-CCCEEEEEcCCcEEEEEecCCCceeEEcC---CCCCceEEEEEcCCCC-EEEEEe---------------
Confidence 455788888 77666665566789999888765433221 1223578899999999 555543
Q ss_pred CCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEcc
Q 046018 128 GDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLH 182 (310)
Q Consensus 128 ~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~ 182 (310)
.++.|..||.+++........ ......++++|+++.++. .+.++.|..|+..
T Consensus 860 --~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s-~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 860 --SQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLT-ASDDQTIRVWETK 912 (1249)
T ss_dssp --SSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE-EETTSCEEEEEHH
T ss_pred --CCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEE-EeCCCeEEEEEcc
Confidence 277899999988766543333 334689999999995554 4677899999865
No 221
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.34 E-value=0.0006 Score=58.58 Aligned_cols=148 Identities=10% Similarity=-0.008 Sum_probs=83.0
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCe-----EEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGL-----ATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQ 120 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~-----~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~ 120 (310)
.....+++++ ++++.++.... .|..+|.+... ...+... .+ ....+.+++++|+|+ .+++.+
T Consensus 59 ~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~-~~-h~~~V~~v~~sp~g~-~las~s-------- 126 (330)
T 2hes_X 59 KAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAII-EG-HENEVKGVAWSNDGY-YLATCS-------- 126 (330)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEE-C-----CEEEEEECTTSC-EEEEEE--------
T ss_pred CCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEE-cC-CCCcEEEEEECCCCC-EEEEEe--------
Confidence 3466899999 67765555444 47777764321 1111111 11 122467899999999 555443
Q ss_pred hhhhhhcCCCCceEEEEeCCC-C---eEE-EEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeC
Q 046018 121 FMSSILSGDKTGRLLKYEKTT-K---EVT-ILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAEL 195 (310)
Q Consensus 121 ~~~~~~~~~~~g~v~~~d~~~-~---~~~-~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~ 195 (310)
.++.|..||... + +.. .+.........++++|+++ ++++...++.|..|+...+ ....+..+
T Consensus 127 ---------~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~---~~~~~~~~ 193 (330)
T 2hes_X 127 ---------RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDD---DWECVAVL 193 (330)
T ss_dssp ---------TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETT---EEEEEEEE
T ss_pred ---------CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCC---CeeEEEEc
Confidence 277899999732 2 222 2222233467899999998 5555577889999987532 11222222
Q ss_pred C---CCCCeeEECCC--CCEEEEEecCCc
Q 046018 196 P---GFPDNVRSNSN--GEFWVALHAKKG 219 (310)
Q Consensus 196 ~---~~p~~i~~d~~--G~l~va~~~~~~ 219 (310)
. +....+.++++ +.+.++....+.
T Consensus 194 ~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 194 NGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp CCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred cCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 2 23456788887 555555444443
No 222
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.34 E-value=0.00017 Score=67.70 Aligned_cols=147 Identities=9% Similarity=-0.021 Sum_probs=87.3
Q ss_pred cceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.+.+..++++| +|++.+......|..++.++++....... ....+..++++|+|+ +.++..
T Consensus 18 ~g~~~~~~~sp-dg~~l~~~~~~~v~l~~~~~~~~~~~~~~----h~~~v~~~~~spdg~-~lasg~------------- 78 (611)
T 1nr0_A 18 RGTAVVLGNTP-AGDKIQYCNGTSVYTVPVGSLTDTEIYTE----HSHQTTVAKTSPSGY-YCASGD------------- 78 (611)
T ss_dssp TTCCCCCEECT-TSSEEEEEETTEEEEEETTCSSCCEEECC----CSSCEEEEEECTTSS-EEEEEE-------------
T ss_pred cCceeEEeeCC-CCCEEEeCCCCEEEEecCCCcccCeEecC----CCCceEEEEECCCCc-EEEEEe-------------
Confidence 46778899999 77655554445577888876544333221 112467899999999 555543
Q ss_pred hcCCCCceEEEEeCCCCe--EE-EEecCCcccceEEEecCCCeEEEEecCC---ceEEEEEccCCCCCcceeeeeCCCCC
Q 046018 126 LSGDKTGRLLKYEKTTKE--VT-ILLQGLAFANGVALSRDRTFILIAETSN---CRILRFWLHGPNSGKQDVFAELPGFP 199 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~--~~-~~~~~~~~~~gi~~~~d~~~lyv~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~p 199 (310)
.++.|..||..+++ .. .+.........++|+||++.|..+.... +.|+.|+.. .. ...+..-....
T Consensus 79 ----~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~-~~---~~~l~gh~~~v 150 (611)
T 1nr0_A 79 ----VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG-TS---NGNLTGQARAM 150 (611)
T ss_dssp ----TTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC-CB---CBCCCCCSSCE
T ss_pred ----CCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC-CC---cceecCCCCCc
Confidence 27889999985432 22 2222223467899999999776654432 367666532 11 11111111234
Q ss_pred CeeEECCCCC-EEEEEecCCc
Q 046018 200 DNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 200 ~~i~~d~~G~-l~va~~~~~~ 219 (310)
..+++.+++. +.++....+.
T Consensus 151 ~~v~f~p~~~~~l~s~s~D~~ 171 (611)
T 1nr0_A 151 NSVDFKPSRPFRIISGSDDNT 171 (611)
T ss_dssp EEEEECSSSSCEEEEEETTSC
T ss_pred eEEEECCCCCeEEEEEeCCCe
Confidence 6789999986 3454444443
No 223
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.33 E-value=0.00043 Score=70.20 Aligned_cols=148 Identities=13% Similarity=0.084 Sum_probs=92.8
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCC--CCEEEEEeCCCchhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEH--KGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~--g~~l~v~~~~~~~~~~~~~~ 123 (310)
..+..+++++ +|++.++... +.|..+|..+++....... ....+..++++++ +. +.++..
T Consensus 658 ~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~-~l~sg~----------- 720 (1249)
T 3sfz_A 658 DEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLVHTYDE----HSEQVNCCHFTNKSNHL-LLATGS----------- 720 (1249)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEEC----CSSCEEEEEECSSSSCC-EEEEEE-----------
T ss_pred CCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceEEEEcC----CCCcEEEEEEecCCCce-EEEEEe-----------
Confidence 5567899999 6665555444 4488889988875443332 1224677888884 44 444432
Q ss_pred hhhcCCCCceEEEEeCCCCeEEEEec-CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCc-cee---ee-----
Q 046018 124 SILSGDKTGRLLKYEKTTKEVTILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGK-QDV---FA----- 193 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~-~~~---~~----- 193 (310)
.++.|..||..+++...... .......++++|+++.++ +.+.++.|..||...+.... ... ..
T Consensus 721 ------~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~-s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 793 (1249)
T 3sfz_A 721 ------NDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLA-SCSADGTLRLWDVRSANERKSINVKRFFLSSEDP 793 (1249)
T ss_dssp ------TTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEE-EEESSSEEEEEEGGGTEEEEEEECCCCC------
T ss_pred ------CCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEE-EEECCCeEEEEeCCCCcccceecccccccccCCc
Confidence 37789999998877654333 234467899999999554 44677899999987431100 000 00
Q ss_pred --eCCCCCCeeEECCCCCEEEEEecCC
Q 046018 194 --ELPGFPDNVRSNSNGEFWVALHAKK 218 (310)
Q Consensus 194 --~~~~~p~~i~~d~~G~l~va~~~~~ 218 (310)
........++++++|...++...+.
T Consensus 794 ~~~~~~~v~~~~~s~dg~~l~~~~~~~ 820 (1249)
T 3sfz_A 794 PEDVEVIVKCCSWSADGDKIIVAAKNK 820 (1249)
T ss_dssp --CCCCCBCCCCBCTTSSEEEEEETTE
T ss_pred cccccceEEEEEECCCCCEEEEEcCCc
Confidence 0112345688999998877766543
No 224
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.32 E-value=1.6e-05 Score=75.99 Aligned_cols=95 Identities=9% Similarity=0.051 Sum_probs=64.2
Q ss_pred eceEEEeCCCCc-EEEEEC---------CCceEEEeCCCCeE---EEEEeecCCccccCCcceEEeCCCCEEEEEeCCCc
Q 046018 49 PLGIRFDKKTGD-LYIADA---------YLGFQVVGPEGGLA---TQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTS 115 (310)
Q Consensus 49 p~gl~~d~~~g~-l~v~~~---------~~gi~~~d~~~~~~---~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~ 115 (310)
...+++++ +|+ |.++.. ...|+.+|.++++. .++ . .....++++|||++|.++.
T Consensus 62 ~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l----~----~~~~~~~~SPDG~~la~~~---- 128 (719)
T 1z68_A 62 ASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL----P----RPIQYLCWSPVGSKLAYVY---- 128 (719)
T ss_dssp CSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC----C----SSBCCEEECSSTTCEEEEE----
T ss_pred eeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCccccceec----C----cccccceECCCCCEEEEEE----
Confidence 56789999 666 444433 13488889988875 222 1 2467899999999666664
Q ss_pred hhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCc-------------------ccceEEEecCCCeEEEEec
Q 046018 116 FQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLA-------------------FANGVALSRDRTFILIAET 171 (310)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~-------------------~~~gi~~~~d~~~lyv~~~ 171 (310)
.+.|+.++.++++...+..... ...+++|+|||+.|+++..
T Consensus 129 ---------------~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 129 ---------------QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp ---------------TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred ---------------CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 5689999988776655432221 1148999999998876543
No 225
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.31 E-value=7e-06 Score=76.57 Aligned_cols=173 Identities=14% Similarity=0.063 Sum_probs=101.8
Q ss_pred EEEEEeCCCCC--eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEEC-C----CceEEEeCCCCeEEE
Q 046018 10 RILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADA-Y----LGFQVVGPEGGLATQ 82 (310)
Q Consensus 10 ~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~-~----~gi~~~d~~~~~~~~ 82 (310)
.+..|.++.+. ++.........+|..+.+...+..... ..+++++ +|+.++... . ..|+.+|.++++.+.
T Consensus 113 ~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~~~ 189 (582)
T 3o4h_A 113 RILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGLRV 189 (582)
T ss_dssp EEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCCEE
T ss_pred eeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCceE
Confidence 35566666654 443333333445554422122221111 5788999 777655332 2 238999998888765
Q ss_pred EEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCC-cccceEE---
Q 046018 83 LVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGL-AFANGVA--- 158 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~-~~~~gi~--- 158 (310)
+... ....+.++++|||++|+.++.. ....|++||.++++.+ +.... .....++
T Consensus 190 l~~~-----~~~~~~~~~SpDG~~l~~~~~~----------------~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 190 FDSG-----EGSFSSASISPGMKVTAGLETA----------------REARLVTVDPRDGSVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp ECCS-----SCEEEEEEECTTSCEEEEEECS----------------SCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred eecC-----CCccccceECCCCCEEEEccCC----------------CeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence 5221 1235789999999966633311 1237999999988877 43332 2234556
Q ss_pred -----EecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCEEEEEec
Q 046018 159 -----LSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHA 216 (310)
Q Consensus 159 -----~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~ 216 (310)
++|||+ +|++....+.+.+|+. +. . .....+....++++ +|++++....
T Consensus 248 ~~~~~~spdg~-~~~~~~~~g~~~l~~~-g~----~--~~~~~~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 248 ITWLGYLPDGR-LAVVARREGRSAVFID-GE----R--VEAPQGNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp EEEEEECTTSC-EEEEEEETTEEEEEET-TE----E--ECCCSSEEEEEEEE-TTEEEEEEEE
T ss_pred ccceeEcCCCc-EEEEEEcCCcEEEEEE-CC----e--eccCCCceEEEEec-CCEEEEEEcC
Confidence 999994 7777677788888887 32 1 11112334567888 8877665443
No 226
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.31 E-value=0.00013 Score=65.28 Aligned_cols=149 Identities=7% Similarity=0.039 Sum_probs=92.4
Q ss_pred ceeceEEEeCCCCcEEEEEC-CCceEEEeCCCCeEEEEEeecCCccccCCcceEEeC-CCCEEEEEeCCCchhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADA-YLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDE-HKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~-~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
.+...|+++|.++++.++.. .+.|..+|.+++....+... .+ ....+.+|+++| +++ ++++.+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~-~g-H~~~V~~l~f~p~~~~-~l~s~s~----------- 185 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKG-IG-AGGSITGLKFNPLNTN-QFYASSM----------- 185 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECC-CS-SSCCCCEEEECSSCTT-EEEEECS-----------
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEc-cC-CCCCEEEEEEeCCCCC-EEEEEeC-----------
Confidence 34668999985555554444 44588888876654333221 11 123578999997 677 5555533
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEecCCc---ccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCe
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILLQGLA---FANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDN 201 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~---~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~ 201 (310)
++.|..||.+++..+.+..... ....++++|+++. +++....+.|..||.++.... .+..-......
T Consensus 186 ------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~g~~dg~i~~wd~~~~~~~---~~~~h~~~v~~ 255 (435)
T 4e54_B 186 ------EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRM-VVTGDNVGNVILLNMDGKELW---NLRMHKKKVTH 255 (435)
T ss_dssp ------SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTE-EEEECSSSBEEEEESSSCBCC---CSBCCSSCEEE
T ss_pred ------CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCE-EEEEeCCCcEeeeccCcceeE---EEecccceEEe
Confidence 7889999998776665543222 2357899999984 445567889999998754221 11111123467
Q ss_pred eEECCCCC-EEEEEecCCc
Q 046018 202 VRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 202 i~~d~~G~-l~va~~~~~~ 219 (310)
+++++++. +.++....+.
T Consensus 256 v~~~p~~~~~~~s~s~d~~ 274 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQT 274 (435)
T ss_dssp EEECTTCSSEEEEEETTSB
T ss_pred eeecCCCceEEEEecCcce
Confidence 88998885 5544444443
No 227
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.29 E-value=7.6e-05 Score=67.58 Aligned_cols=124 Identities=17% Similarity=0.162 Sum_probs=76.6
Q ss_pred ceeceEEEeCC---CCcEEEEECC-------------CceEEEeCCC---C-----eEEEEEeecCCccccCCcceEEeC
Q 046018 47 GRPLGIRFDKK---TGDLYIADAY-------------LGFQVVGPEG---G-----LATQLVTEAAGQPLRFTNDLDIDE 102 (310)
Q Consensus 47 ~~p~gl~~d~~---~g~l~v~~~~-------------~gi~~~d~~~---~-----~~~~~~~~~~~~~~~~~~~i~~d~ 102 (310)
..+.||+++++ ++.|||+... ..|.|+..+. . ..+.+.........+....|+++|
T Consensus 69 ~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp 148 (463)
T 2wg3_C 69 RGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP 148 (463)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT
T ss_pred CcceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC
Confidence 56789999983 4789998642 2476664432 1 223344433223456778899999
Q ss_pred CCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCC--------------------eEEEEecCCcccceEEEecC
Q 046018 103 HKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTK--------------------EVTILLQGLAFANGVALSRD 162 (310)
Q Consensus 103 ~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--------------------~~~~~~~~~~~~~gi~~~~d 162 (310)
||. |||+.-.............-.....|.|+|+++++. +.++.+.++..|.|++|+|+
T Consensus 149 DG~-LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~ 227 (463)
T 2wg3_C 149 DGF-LYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRH 227 (463)
T ss_dssp TSC-EEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESS
T ss_pred CCc-EEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCC
Confidence 999 999974321100000000001234788999999863 23566778889999999997
Q ss_pred -----CC-eEEEEec
Q 046018 163 -----RT-FILIAET 171 (310)
Q Consensus 163 -----~~-~lyv~~~ 171 (310)
|+ ++|.++.
T Consensus 228 tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 228 PTDININLTILCSDS 242 (463)
T ss_dssp CSSTTCSEEEEEECC
T ss_pred CCCcccceEEEeccc
Confidence 33 4677775
No 228
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.29 E-value=7.8e-06 Score=71.74 Aligned_cols=170 Identities=8% Similarity=-0.048 Sum_probs=95.8
Q ss_pred ccccccccCCCCCccccccceeceEEEeC-CCCcEEEEECC------CceEEEeCCCCeEEEEEeecCCccccCCcceEE
Q 046018 28 TSQRKECVRPFAPDIEHICGRPLGIRFDK-KTGDLYIADAY------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDI 100 (310)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~p~gl~~d~-~~g~l~v~~~~------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~ 100 (310)
.+..+|..+.+...+.........+++++ +...|.++... ..|+.+|.+++..+.+... ........+++
T Consensus 169 ~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---~~~~~~~~~~~ 245 (388)
T 3pe7_A 169 RLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH---AEGESCTHEFW 245 (388)
T ss_dssp EEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCC---CTTEEEEEEEE
T ss_pred eEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeC---CCCcccccceE
Confidence 34445554433222222223455788887 55556554432 2588999887765544321 11112446789
Q ss_pred eCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCC------cccceEEEecCCCeEEEEe----
Q 046018 101 DEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGL------AFANGVALSRDRTFILIAE---- 170 (310)
Q Consensus 101 d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~------~~~~gi~~~~d~~~lyv~~---- 170 (310)
+|||++|++..... +.....|+.||+++++.+.+.... ..+.+++++|||+.|+++.
T Consensus 246 spdg~~l~~~~~~~-------------~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 312 (388)
T 3pe7_A 246 VPDGSALVYVSYLK-------------GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDS 312 (388)
T ss_dssp CTTSSCEEEEEEET-------------TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC--------
T ss_pred CCCCCEEEEEecCC-------------CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeecc
Confidence 99998675543210 111235999999988776543211 1266789999999877653
Q ss_pred ----cCCceEEEEEccCCCCCcceeeeeCCC-----------CCCeeEECCCCC-EEEEEec
Q 046018 171 ----TSNCRILRFWLHGPNSGKQDVFAELPG-----------FPDNVRSNSNGE-FWVALHA 216 (310)
Q Consensus 171 ----~~~~~i~~~~~~~~~~~~~~~~~~~~~-----------~p~~i~~d~~G~-l~va~~~ 216 (310)
.....|++++++++. ...+..... ....+++++||+ |+++...
T Consensus 313 ~~~~~~~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~ 371 (388)
T 3pe7_A 313 GYKIENDPFLYVFNMKNGT---QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV 371 (388)
T ss_dssp ----CCCCEEEEEETTTTE---EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred ccccCCCCEEEEEeccCCc---eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecC
Confidence 445689999987642 233333222 245678999996 4444433
No 229
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.29 E-value=0.00015 Score=69.89 Aligned_cols=151 Identities=13% Similarity=0.044 Sum_probs=89.4
Q ss_pred ceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCC--CCEEEEEeCCCchhhhhhhh
Q 046018 47 GRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEH--KGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 47 ~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~--g~~l~v~~~~~~~~~~~~~~ 123 (310)
+....+++++ +|+ |..+...+.|..+|..++........ .+ ....+.+++++++ ++ +.++..
T Consensus 10 ~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l-~~-h~~~V~~l~~s~~~~~~-~l~s~s----------- 74 (753)
T 3jro_A 10 ELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTL-TG-HEGPVWRVDWAHPKFGT-ILASCS----------- 74 (753)
T ss_dssp CCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEE-CC-CSSCEEEEEECCTTSCS-EEEEEE-----------
T ss_pred ceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceec-cC-CcCceEEEEecCCCCCC-EEEEEe-----------
Confidence 5566788988 555 44444444477777764433322221 11 1224678899877 88 444442
Q ss_pred hhhcCCCCceEEEEeCCCCeEEEE---ecCCcccceEEEecC--CCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCC
Q 046018 124 SILSGDKTGRLLKYEKTTKEVTIL---LQGLAFANGVALSRD--RTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGF 198 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~~~---~~~~~~~~gi~~~~d--~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 198 (310)
.+|.|..||..+++.... .........++++|+ ++.++ +...++.|.+|+...........+...+..
T Consensus 75 ------~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~-sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~ 147 (753)
T 3jro_A 75 ------YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLL-VASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (753)
T ss_dssp ------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTSEEEEEECCSSSCCCCEEEECCSSC
T ss_pred ------CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEE-EEeCCCcEEEEEeecCCCcceeEeecCCCc
Confidence 278899999887763322 222344678999999 77444 446788999999875422222222222233
Q ss_pred CCeeEECC-------------CCCEEEEEecCCc
Q 046018 199 PDNVRSNS-------------NGEFWVALHAKKG 219 (310)
Q Consensus 199 p~~i~~d~-------------~G~l~va~~~~~~ 219 (310)
...+++++ +|.+.++....+.
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~ 181 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNL 181 (753)
T ss_dssp EEEEEECCCC---------CGGGCCEEEEETTSC
T ss_pred eEEEEecCcccccccccccCCCCCEEEEEECCCe
Confidence 45677777 4665565555554
No 230
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.28 E-value=4.1e-05 Score=66.15 Aligned_cols=172 Identities=10% Similarity=0.098 Sum_probs=97.6
Q ss_pred eccccccccCCCCCccccccceeceEEEeCC---CC----cEEEEECC--C-c--eEEEeCCCCeEEEEEee--cCCccc
Q 046018 27 TTSQRKECVRPFAPDIEHICGRPLGIRFDKK---TG----DLYIADAY--L-G--FQVVGPEGGLATQLVTE--AAGQPL 92 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~---~g----~l~v~~~~--~-g--i~~~d~~~~~~~~~~~~--~~~~~~ 92 (310)
.+|..||..+...+.+ ..++++++.+-++ .| .+++++.. . . ++.+|++++.++.+... +.....
T Consensus 50 ~gL~Vydl~G~~l~~~--~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~ 127 (355)
T 3amr_A 50 SGLVVYSLDGKMLHSY--NTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAI 127 (355)
T ss_dssp TEEEEEETTSCEEEEE--CCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCC
T ss_pred CCEEEEcCCCcEEEEc--cCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCC
Confidence 5788888877332222 1256676655440 11 24666654 3 2 56668888776554221 101223
Q ss_pred cCCcceEE--eCC-CC-EEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeC---CCCeE--E--EEecCCcccceEEEec
Q 046018 93 RFTNDLDI--DEH-KG-VIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEK---TTKEV--T--ILLQGLAFANGVALSR 161 (310)
Q Consensus 93 ~~~~~i~~--d~~-g~-~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~---~~~~~--~--~~~~~~~~~~gi~~~~ 161 (310)
..|.++|. ++. |+ ++|+++ +.|.+..|+. ..++. + .-......|.|+++++
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~------------------k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd 189 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTG------------------KEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADD 189 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEEC------------------SSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEET
T ss_pred CCeeEEEEEecCCCCcEEEEEEC------------------CCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcC
Confidence 67899998 774 54 355554 3566666543 22322 1 1223456789999999
Q ss_pred CCCeEEEEecCCceEEEEEccCCCCCcceeeee-----CCCCCCeeEE--CCCC--CEEEEEecCCc
Q 046018 162 DRTFILIAETSNCRILRFWLHGPNSGKQDVFAE-----LPGFPDNVRS--NSNG--EFWVALHAKKG 219 (310)
Q Consensus 162 d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~p~~i~~--d~~G--~l~va~~~~~~ 219 (310)
...+||+++.. ..||+|+.+.........+.. +...+.||++ .++| .|++++..++.
T Consensus 190 ~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 190 EYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp TTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred CCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 88889999877 569999965322112222222 2235788888 4444 46666655544
No 231
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.28 E-value=0.00015 Score=61.88 Aligned_cols=167 Identities=8% Similarity=0.038 Sum_probs=101.1
Q ss_pred eccccccccCCCCCccccccceeceEEEeCCCCcEEEEECC--------------CceEEEeCCCCeEEEEEeecCCccc
Q 046018 27 TTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAY--------------LGFQVVGPEGGLATQLVTEAAGQPL 92 (310)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~--------------~gi~~~d~~~~~~~~~~~~~~~~~~ 92 (310)
..|++++..+...+.+. ...+..|..+ ++.||.+... ..|++++.+++..+.+...
T Consensus 37 ~~ly~~~~dg~~~~~l~--~~~~~~i~~~--g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~------ 106 (302)
T 3s25_A 37 GRLYAMNIDGSNIHKLS--NDTAMYINAD--KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD------ 106 (302)
T ss_dssp TEEEEEETTSCSCEEEE--EEEEEEEEEC--SSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS------
T ss_pred ceEEEEcCCCCCCEEcc--CCceeeEEEc--CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC------
Confidence 45777766663322222 2345566554 5678777643 2499999998876555321
Q ss_pred cCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecC
Q 046018 93 RFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETS 172 (310)
Q Consensus 93 ~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~ 172 (310)
...+++++|++||+++.. ......|++.+.++...+.+..... ++++++++.||+++..
T Consensus 107 ---~~~~~s~~g~~Iy~~~~~--------------~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g 165 (302)
T 3s25_A 107 ---PCIYASLIGNYIYYLHYD--------------TQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPK 165 (302)
T ss_dssp ---CEEEEEEETTEEEEEEES--------------SSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTT
T ss_pred ---CccEEEEeCCEEEEEeec--------------CCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCC
Confidence 123566677789998710 0125679999998766666654332 4578899999999887
Q ss_pred CceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCC-CEEEEEecCCccceeeeeeccccccE
Q 046018 173 NCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNG-EFWVALHAKKGLFGKLILLNSWLGKT 234 (310)
Q Consensus 173 ~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G-~l~va~~~~~~~~~~~i~~~~~~g~~ 234 (310)
..+|++.++++.. .+.+.. .+..+.+.|+| .||.+.+..+.. |.+...+|..
T Consensus 166 ~~~Iy~~~l~g~~---~~~l~~---~~~~~~~~P~g~~iy~t~~~~~~~----I~~~~ldG~~ 218 (302)
T 3s25_A 166 NGQLYRYDTASQS---EALFYD---CNCYKPVVLDDTNVYYMDVNRDNA----IVHVNINNPN 218 (302)
T ss_dssp TCCEEEEETTTTE---EEEEEC---SCEEEEEEEETTEEEEEEGGGTTE----EEEECSSSCC
T ss_pred CceEEEEECCCCC---EEEEeC---CCccceeeecCCEEEEEEcCCCcE----EEEEECCCCC
Confidence 8899999988642 223322 12234455544 677766654321 4444445443
No 232
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.27 E-value=8.8e-05 Score=63.97 Aligned_cols=152 Identities=7% Similarity=-0.002 Sum_probs=94.2
Q ss_pred ceeceEEEeCC----CCcEEEEECCCceEEEeCCCCeEEEEEeec-CCccccCCcceEEeCC----CCEEEEEeCCCchh
Q 046018 47 GRPLGIRFDKK----TGDLYIADAYLGFQVVGPEGGLATQLVTEA-AGQPLRFTNDLDIDEH----KGVIYFTDSSTSFQ 117 (310)
Q Consensus 47 ~~p~gl~~d~~----~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~-~~~~~~~~~~i~~d~~----g~~l~v~~~~~~~~ 117 (310)
.....++++|. +..++++...+.|..+|..++......... .......+..+++.++ |+.|+.+.
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~------ 92 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG------ 92 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE------
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec------
Confidence 56678999862 233555555556788887755432222221 1112235778899988 66344443
Q ss_pred hhhhhhhhhcCCCCceEEEEeCCCCeEEEEec-CCcccceEEEec-CCCeEEEEecCCceEEEEEccCCCCCcceeee--
Q 046018 118 RRQFMSSILSGDKTGRLLKYEKTTKEVTILLQ-GLAFANGVALSR-DRTFILIAETSNCRILRFWLHGPNSGKQDVFA-- 193 (310)
Q Consensus 118 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~~~gi~~~~-d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~-- 193 (310)
.++.|..||..+++...... .......++++| +++ ++++...++.|.+||...+. ....+.
T Consensus 93 ------------~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~--~~~~~~~~ 157 (366)
T 3k26_A 93 ------------SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDT--LVAIFGGV 157 (366)
T ss_dssp ------------TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTE--EEEEECST
T ss_pred ------------CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCe--EEEEeccc
Confidence 37889999988776554333 344568999999 777 45555678899999987431 112221
Q ss_pred -eCCCCCCeeEECCCCCEEEEEecCCc
Q 046018 194 -ELPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 194 -~~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
........++++++|++.++....+.
T Consensus 158 ~~~~~~v~~~~~~~~~~~l~~~~~dg~ 184 (366)
T 3k26_A 158 EGHRDEVLSADYDLLGEKIMSCGMDHS 184 (366)
T ss_dssp TSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ccccCceeEEEECCCCCEEEEecCCCC
Confidence 12234567899999987777666554
No 233
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.27 E-value=0.0015 Score=61.30 Aligned_cols=113 Identities=11% Similarity=0.097 Sum_probs=74.5
Q ss_pred ceeceEEEeCCCCc--EEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGD--LYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 47 ~~p~gl~~d~~~g~--l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
.....+++++ ++. |..+...+.|..+|..+++....... ....+++++++|+|+ ++++...
T Consensus 148 ~~v~~v~f~p-~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~----H~~~V~~v~fspdg~-~las~s~----------- 210 (611)
T 1nr0_A 148 RAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFKSTFGE----HTKFVHSVRYNPDGS-LFASTGG----------- 210 (611)
T ss_dssp SCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEEEEECC----CSSCEEEEEECTTSS-EEEEEET-----------
T ss_pred CCceEEEECC-CCCeEEEEEeCCCeEEEEECCCCeEeeeecc----ccCceEEEEECCCCC-EEEEEEC-----------
Confidence 3456788888 553 44443444477778776654332221 123578999999999 6665532
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEe-c-------CCcccceEEEecCCCeEEEEecCCceEEEEEccC
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILL-Q-------GLAFANGVALSRDRTFILIAETSNCRILRFWLHG 183 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~-~-------~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~ 183 (310)
++.|..||..+++..... . .......++++||++.| ++...++.|.+||...
T Consensus 211 ------D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l-~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 211 ------DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKI-ASASADKTIKIWNVAT 270 (611)
T ss_dssp ------TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEE-EEEETTSEEEEEETTT
T ss_pred ------CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEE-EEEeCCCeEEEEeCCC
Confidence 788999998777654433 1 12235789999999854 4556778999999874
No 234
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.27 E-value=0.00028 Score=62.82 Aligned_cols=150 Identities=13% Similarity=0.129 Sum_probs=85.8
Q ss_pred ceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCe-----------EEEEEeecCCcc---------ccCCcceEEeCCC-
Q 046018 47 GRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGL-----------ATQLVTEAAGQP---------LRFTNDLDIDEHK- 104 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~-----------~~~~~~~~~~~~---------~~~~~~i~~d~~g- 104 (310)
.....+++++ +|++.++.... .|..++..++. ....... .... ...+.++++.|++
T Consensus 29 ~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 29 DIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC-CCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred CcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc-ccccccccccccccCceEEEEEcCCCC
Confidence 5677899999 77665554444 47777776554 1111111 1100 0347889999998
Q ss_pred -CEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEE--------------------------------------
Q 046018 105 -GVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVT-------------------------------------- 145 (310)
Q Consensus 105 -~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~-------------------------------------- 145 (310)
. .+++... ++.|..|+..++...
T Consensus 107 ~~-~l~s~s~-----------------d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (447)
T 3dw8_B 107 AA-QFLLSTN-----------------DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASP 168 (447)
T ss_dssp SS-EEEEEEC-----------------SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEE
T ss_pred cc-eEEEeCC-----------------CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccc
Confidence 6 4444422 667777776543321
Q ss_pred --EEec-CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceee-------eeCCCCCCeeEECCCC-CEEEEE
Q 046018 146 --ILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVF-------AELPGFPDNVRSNSNG-EFWVAL 214 (310)
Q Consensus 146 --~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~-------~~~~~~p~~i~~d~~G-~l~va~ 214 (310)
.+.. .......++++|+++.|..+ .++.|.+||+..... ....+ .........++++++| ++.++.
T Consensus 169 ~~~~~~~h~~~v~~~~~~~~~~~l~s~--~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 245 (447)
T 3dw8_B 169 RRIFANAHTYHINSISINSDYETYLSA--DDLRINLWHLEITDR-SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS 245 (447)
T ss_dssp EEEECSCCSSCCCEEEECTTSSEEEEE--CSSEEEEEETTEEEE-EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE
T ss_pred eEEeccCCCcceEEEEEcCCCCEEEEe--CCCeEEEEECCCCCc-eeeeeecccccccccCcceEEEEECCCCCcEEEEE
Confidence 1111 12235689999999855544 588999999862100 01111 1112335678999998 777776
Q ss_pred ecCCc
Q 046018 215 HAKKG 219 (310)
Q Consensus 215 ~~~~~ 219 (310)
...+.
T Consensus 246 ~~dg~ 250 (447)
T 3dw8_B 246 SSKGT 250 (447)
T ss_dssp ETTSC
T ss_pred eCCCe
Confidence 66554
No 235
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.26 E-value=3.1e-05 Score=66.39 Aligned_cols=147 Identities=10% Similarity=-0.043 Sum_probs=89.8
Q ss_pred ceeceEEEeCCCCc--EEEEECCCceEEEeC-CCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhh
Q 046018 47 GRPLGIRFDKKTGD--LYIADAYLGFQVVGP-EGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 47 ~~p~gl~~d~~~g~--l~v~~~~~gi~~~d~-~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~ 123 (310)
..+..+++++ +++ |+++...+.|..+|. ++++...+... .....+..+++++ ++.++.+.
T Consensus 57 ~~v~~~~~~~-~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~---~~~~~v~~l~~~~-~~~l~s~~------------ 119 (342)
T 1yfq_A 57 HPLLCCNFID-NTDLQIYVGTVQGEILKVDLIGSPSFQALTNN---EANLGICRICKYG-DDKLIAAS------------ 119 (342)
T ss_dssp SCEEEEEEEE-SSSEEEEEEETTSCEEEECSSSSSSEEECBSC---CCCSCEEEEEEET-TTEEEEEE------------
T ss_pred CceEEEEECC-CCCcEEEEEcCCCeEEEEEeccCCceEecccc---CCCCceEEEEeCC-CCEEEEEc------------
Confidence 4567899998 566 555555555889998 87765433210 0123567899999 88344443
Q ss_pred hhhcCCCCceEEEEeCCC---------CeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccC-CCCCcceeee
Q 046018 124 SILSGDKTGRLLKYEKTT---------KEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHG-PNSGKQDVFA 193 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~---------~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~-~~~~~~~~~~ 193 (310)
.++.|..||..+ ++..........+..+++++++ ++++ ...+.|..|+... ..........
T Consensus 120 ------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~-~~d~~i~i~d~~~~~~~~~~~~~~ 190 (342)
T 1yfq_A 120 ------WDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVG-MNNSQVQWFRLPLCEDDNGTIEES 190 (342)
T ss_dssp ------TTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEE-ESTTEEEEEESSCCTTCCCEEEEC
T ss_pred ------CCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEE-eCCCeEEEEECCccccccceeeec
Confidence 267888888653 2211111222345788998876 5554 6678999999875 3221111111
Q ss_pred eCCCCCCeeEECC-CCCEEEEEecCCc
Q 046018 194 ELPGFPDNVRSNS-NGEFWVALHAKKG 219 (310)
Q Consensus 194 ~~~~~p~~i~~d~-~G~l~va~~~~~~ 219 (310)
........+++++ +|+++++....+.
T Consensus 191 ~~~~~i~~i~~~~~~~~~l~~~~~dg~ 217 (342)
T 1yfq_A 191 GLKYQIRDVALLPKEQEGYACSSIDGR 217 (342)
T ss_dssp SCSSCEEEEEECSGGGCEEEEEETTSE
T ss_pred CCCCceeEEEECCCCCCEEEEEecCCc
Confidence 2234457889999 8987777666554
No 236
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.26 E-value=0.00038 Score=60.20 Aligned_cols=151 Identities=10% Similarity=0.108 Sum_probs=91.2
Q ss_pred ceeceEEEeCC-CCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCC--CCEEEEEeCCCchhhhhhh
Q 046018 47 GRPLGIRFDKK-TGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEH--KGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 47 ~~p~gl~~d~~-~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~--g~~l~v~~~~~~~~~~~~~ 122 (310)
.....+++.++ +++++++... +.|..+|.++++...+.... . ....+..++++|+ ++.++++.
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~l~~~~----------- 122 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA-V-HSASVNSVQWAPHEYGPLLLVAS----------- 122 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEEC-C-CSSCEEEEEECCGGGCSEEEEEE-----------
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeec-C-CCcceEEEEeCCCCCCCEEEEec-----------
Confidence 45567888762 1555544444 44888888877643332221 1 1235788999999 88444444
Q ss_pred hhhhcCCCCceEEEEeCCCCe---EEEEecCCcccceEEEec-------------CCCeEEEEecCCceEEEEEccCCCC
Q 046018 123 SSILSGDKTGRLLKYEKTTKE---VTILLQGLAFANGVALSR-------------DRTFILIAETSNCRILRFWLHGPNS 186 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~---~~~~~~~~~~~~gi~~~~-------------d~~~lyv~~~~~~~i~~~~~~~~~~ 186 (310)
.++.|..||..++. ...+.........++++| +++.+ ++...++.|.+||......
T Consensus 123 -------~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~ 194 (379)
T 3jrp_A 123 -------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF-VTGGADNLVKIWKYNSDAQ 194 (379)
T ss_dssp -------TTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE-EEEETTSCEEEEEEETTTT
T ss_pred -------CCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE-EEEeCCCeEEEEEecCCCc
Confidence 27789999987652 222223334467899999 57744 4446778999999874321
Q ss_pred CcceeeeeC---CCCCCeeEECCC---CCEEEEEecCCc
Q 046018 187 GKQDVFAEL---PGFPDNVRSNSN---GEFWVALHAKKG 219 (310)
Q Consensus 187 ~~~~~~~~~---~~~p~~i~~d~~---G~l~va~~~~~~ 219 (310)
........ ......++++++ |++.++....+.
T Consensus 195 -~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 195 -TYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp -EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred -ceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE
Confidence 11122222 233467899999 777676665554
No 237
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.25 E-value=0.0015 Score=58.10 Aligned_cols=103 Identities=10% Similarity=0.143 Sum_probs=66.5
Q ss_pred CCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCe-EEEEe--------cCCcccceEEEecCC-
Q 046018 94 FTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKE-VTILL--------QGLAFANGVALSRDR- 163 (310)
Q Consensus 94 ~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~-~~~~~--------~~~~~~~gi~~~~d~- 163 (310)
.+.+++++|+|+ ++++. . ++.|..||..+.. ..... ........++++|++
T Consensus 179 ~v~~~~~~~~~~-~l~s~-~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 239 (447)
T 3dw8_B 179 HINSISINSDYE-TYLSA-D-----------------DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSC 239 (447)
T ss_dssp CCCEEEECTTSS-EEEEE-C-----------------SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCT
T ss_pred ceEEEEEcCCCC-EEEEe-C-----------------CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCC
Confidence 578899999999 66554 2 7889999987322 22111 112235789999998
Q ss_pred CeEEEEecCCceEEEEEccCCCCC--cceeeeeCCC------------CCCeeEECCCCCEEEEEec
Q 046018 164 TFILIAETSNCRILRFWLHGPNSG--KQDVFAELPG------------FPDNVRSNSNGEFWVALHA 216 (310)
Q Consensus 164 ~~lyv~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~------------~p~~i~~d~~G~l~va~~~ 216 (310)
+ ++++...++.|.+||...+... ....+..... ....++++++|++.++...
T Consensus 240 ~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 240 N-TFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp T-EEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred c-EEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 6 5555577889999998754321 0122222111 3467899999988777666
No 238
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.25 E-value=0.00085 Score=57.16 Aligned_cols=147 Identities=9% Similarity=0.060 Sum_probs=84.5
Q ss_pred eeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCE-EEEEeCCCchhhhhhhhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGV-IYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~-l~v~~~~~~~~~~~~~~~~~ 126 (310)
....+...+....|..+...+.+..+|............ ........+++.+++.. ++++..
T Consensus 130 ~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~s~~-------------- 192 (340)
T 4aow_A 130 DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE---SHSEWVSCVRFSPNSSNPIIVSCG-------------- 192 (340)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSS---SCSSCEEEEEECSCSSSCEEEEEE--------------
T ss_pred ceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEec---cccCcccceEEccCCCCcEEEEEc--------------
Confidence 344566666333444444444577778776543222111 11223456666655321 444432
Q ss_pred cCCCCceEEEEeCCCCeEEEEecCC-cccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEEC
Q 046018 127 SGDKTGRLLKYEKTTKEVTILLQGL-AFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSN 205 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~~~~~~~~-~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 205 (310)
.++.|..||..+++........ .....++++||++.| ++...++.|.+||..... ....+ ........+++.
T Consensus 193 ---~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~Dg~i~iwd~~~~~--~~~~~-~~~~~v~~~~~~ 265 (340)
T 4aow_A 193 ---WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC-ASGGKDGQAMLWDLNEGK--HLYTL-DGGDIINALCFS 265 (340)
T ss_dssp ---TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE-EEEETTCEEEEEETTTTE--EEEEE-ECSSCEEEEEEC
T ss_pred ---CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEE-EEEeCCCeEEEEEeccCc--eeeee-cCCceEEeeecC
Confidence 2677999999887765544332 345789999999854 455677899999987431 11111 122334667888
Q ss_pred CCCCEEEEEecCC
Q 046018 206 SNGEFWVALHAKK 218 (310)
Q Consensus 206 ~~G~l~va~~~~~ 218 (310)
+++.+.++..++.
T Consensus 266 ~~~~~~~~~~d~~ 278 (340)
T 4aow_A 266 PNRYWLCAATGPS 278 (340)
T ss_dssp SSSSEEEEEETTE
T ss_pred CCCceeeccCCCE
Confidence 8888877765543
No 239
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.22 E-value=0.00022 Score=61.30 Aligned_cols=147 Identities=14% Similarity=0.014 Sum_probs=83.8
Q ss_pred ceeceEEEeCCC---CcEEEEECCCceEEEeCCCCe-EEEEEeecCCccccCCcce------EEeCCCCEEEEEeCCCch
Q 046018 47 GRPLGIRFDKKT---GDLYIADAYLGFQVVGPEGGL-ATQLVTEAAGQPLRFTNDL------DIDEHKGVIYFTDSSTSF 116 (310)
Q Consensus 47 ~~p~gl~~d~~~---g~l~v~~~~~gi~~~d~~~~~-~~~~~~~~~~~~~~~~~~i------~~d~~g~~l~v~~~~~~~ 116 (310)
.....++++++. ..|+.+...+.|..+|.++++ ....... ....+..+ +++++++ .+++..
T Consensus 66 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~s~~~~-~l~~~~---- 136 (357)
T 3i2n_A 66 KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG----HKEIINAIDGIGGLGIGEGAP-EIVTGS---- 136 (357)
T ss_dssp SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC----CSSCEEEEEEESGGGCC-CCC-EEEEEE----
T ss_pred CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe----cccceEEEeeccccccCCCcc-EEEEEe----
Confidence 455688898842 445555555558888888765 2212111 11124444 4578898 444432
Q ss_pred hhhhhhhhhhcCCCCceEEEEeCCCCe--EEEEecCCc----ccceEE----EecCCCeEEEEecCCceEEEEEccCCCC
Q 046018 117 QRRQFMSSILSGDKTGRLLKYEKTTKE--VTILLQGLA----FANGVA----LSRDRTFILIAETSNCRILRFWLHGPNS 186 (310)
Q Consensus 117 ~~~~~~~~~~~~~~~g~v~~~d~~~~~--~~~~~~~~~----~~~gi~----~~~d~~~lyv~~~~~~~i~~~~~~~~~~ 186 (310)
.++.|..||..+++ ...+..... ....++ ++++++.++.+ ..++.|..||.....
T Consensus 137 -------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~- 201 (357)
T 3i2n_A 137 -------------RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG-YDNGDIKLFDLRNMA- 201 (357)
T ss_dssp -------------TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE-ETTSEEEEEETTTTE-
T ss_pred -------------CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEE-ccCCeEEEEECccCc-
Confidence 27789999987664 222221111 234455 67898855544 667899999987532
Q ss_pred CcceeeeeCCCCCCeeEECC---CCCEEEEEecCCc
Q 046018 187 GKQDVFAELPGFPDNVRSNS---NGEFWVALHAKKG 219 (310)
Q Consensus 187 ~~~~~~~~~~~~p~~i~~d~---~G~l~va~~~~~~ 219 (310)
.............+++++ ++++.++....+.
T Consensus 202 --~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 235 (357)
T 3i2n_A 202 --LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK 235 (357)
T ss_dssp --EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE
T ss_pred --eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe
Confidence 112222334567889998 7876666655554
No 240
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.21 E-value=0.00013 Score=64.15 Aligned_cols=117 Identities=15% Similarity=0.187 Sum_probs=79.8
Q ss_pred ceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCC---ccccCCcceEEeCCCCEEEEEeCCCchhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAG---QPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~---~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~ 122 (310)
.....+++++ ++..+++....+ |..+|.++++.......... .....+..++++|+|+ +.++...
T Consensus 250 ~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~--------- 318 (380)
T 3iz6_a 250 GDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYS--------- 318 (380)
T ss_dssp SCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECT---------
T ss_pred CCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCC-EEEEEEC---------
Confidence 4567899999 777776666655 88889988865444332111 1122467899999999 5555432
Q ss_pred hhhhcCCCCceEEEEeCCCCeEEEEec----C-CcccceEEEecCCCeEEEEecCCceEEEEEccC
Q 046018 123 SSILSGDKTGRLLKYEKTTKEVTILLQ----G-LAFANGVALSRDRTFILIAETSNCRILRFWLHG 183 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~~~~~~~----~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~ 183 (310)
+|.|..||..+++...... . ......++++||++. +++.+.++.|.+|+..+
T Consensus 319 --------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~-l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 319 --------NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSA-LCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp --------TSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSE-EEEECTTSCEEEEECCS
T ss_pred --------CCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCE-EEEeeCCCCEEEEecCC
Confidence 7889999987766543221 1 223578999999994 55557789999999764
No 241
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.21 E-value=0.00089 Score=56.80 Aligned_cols=152 Identities=8% Similarity=-0.089 Sum_probs=87.0
Q ss_pred cceeceEEEeCCCCcEEEEECCC-ceEEEeCCCCe--EEEEEeecCCccccCCcceEEeC--CCCEEEEEeCCCchhhhh
Q 046018 46 CGRPLGIRFDKKTGDLYIADAYL-GFQVVGPEGGL--ATQLVTEAAGQPLRFTNDLDIDE--HKGVIYFTDSSTSFQRRQ 120 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~l~v~~~~~-gi~~~d~~~~~--~~~~~~~~~~~~~~~~~~i~~d~--~g~~l~v~~~~~~~~~~~ 120 (310)
......+++++ +++++++.... .|..+|.+++. .+..... .+ ....+..+++.+ +++ ++++..
T Consensus 11 ~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~d~~-~l~s~~-------- 78 (351)
T 3f3f_A 11 DDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSW-RA-HDSSIVAIDWASPEYGR-IIASAS-------- 78 (351)
T ss_dssp SSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEE-EC-CSSCEEEEEECCGGGCS-EEEEEE--------
T ss_pred ccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceeccee-cc-CCCcEEEEEEcCCCCCC-EEEEEc--------
Confidence 35677899999 66655544444 47777766542 1211111 11 122467899988 588 444432
Q ss_pred hhhhhhcCCCCceEEEEeCCCCe----------EEEEecCCcccceEEEecC--CCeEEEEecCCceEEEEEccCCCC-C
Q 046018 121 FMSSILSGDKTGRLLKYEKTTKE----------VTILLQGLAFANGVALSRD--RTFILIAETSNCRILRFWLHGPNS-G 187 (310)
Q Consensus 121 ~~~~~~~~~~~g~v~~~d~~~~~----------~~~~~~~~~~~~gi~~~~d--~~~lyv~~~~~~~i~~~~~~~~~~-~ 187 (310)
.++.|..||..+++ ...+.........++++|+ ++.++. ...++.|..||...... .
T Consensus 79 ---------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~dg~v~iwd~~~~~~~~ 148 (351)
T 3f3f_A 79 ---------YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLAC-LGNDGILRLYDALEPSDLR 148 (351)
T ss_dssp ---------TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTCEEEEEECSSTTCTT
T ss_pred ---------CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEE-ecCCCcEEEecCCChHHhc
Confidence 26788889887652 2222223344678999999 885554 46778999999874321 1
Q ss_pred ccee---eeeC-------CCCCCeeEECCC---CCEEEEEecCCc
Q 046018 188 KQDV---FAEL-------PGFPDNVRSNSN---GEFWVALHAKKG 219 (310)
Q Consensus 188 ~~~~---~~~~-------~~~p~~i~~d~~---G~l~va~~~~~~ 219 (310)
.... .... ......+.+.++ +.++++....+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~ 193 (351)
T 3f3f_A 149 SWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQA 193 (351)
T ss_dssp CCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEE
T ss_pred cccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCc
Confidence 1111 0000 122355777776 666666555554
No 242
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.21 E-value=0.0011 Score=55.84 Aligned_cols=116 Identities=13% Similarity=0.070 Sum_probs=70.0
Q ss_pred ceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeC--CCCEEEEEeCCCchhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDE--HKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~--~g~~l~v~~~~~~~~~~~~~~ 123 (310)
.....+++++ +|+..++....+ |..+|.++...+.+... .+ -...++++++.+ +|+ ++++.+.
T Consensus 10 ~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l-~g-H~~~V~~v~~s~~~~g~-~l~s~s~---------- 75 (297)
T 2pm7_B 10 EMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTL-TG-HEGPVWRVDWAHPKFGT-ILASCSY---------- 75 (297)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEE-CC-CSSCEEEEEECCGGGCS-EEEEEET----------
T ss_pred CceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEE-cc-ccCCeEEEEecCCCcCC-EEEEEcC----------
Confidence 3456789999 777665555444 77777764321111111 11 112467788865 378 5555432
Q ss_pred hhhcCCCCceEEEEeCCCCeEE---EEecCCcccceEEEecC--CCeEEEEecCCceEEEEEccCC
Q 046018 124 SILSGDKTGRLLKYEKTTKEVT---ILLQGLAFANGVALSRD--RTFILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~---~~~~~~~~~~gi~~~~d--~~~lyv~~~~~~~i~~~~~~~~ 184 (310)
++.|..||..+++.. .+.......+.++++|+ +. ++++.+.++.|.+|+....
T Consensus 76 -------D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 76 -------DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp -------TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSS
T ss_pred -------CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCC
Confidence 788999998776422 22222234678999997 66 4455567889999998743
No 243
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.18 E-value=0.0022 Score=54.46 Aligned_cols=148 Identities=8% Similarity=0.076 Sum_probs=88.5
Q ss_pred ceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..+++++ +|++.++....+ |..++............ .......+...++++ .+++..
T Consensus 87 ~~V~~~~~s~-dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~l~s~s------------- 147 (340)
T 4aow_A 87 HFVSDVVISS-DGQFALSGSWDGTLRLWDLTTGTTTRRFVG----HTKDVLSVAFSSDNR-QIVSGS------------- 147 (340)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEEC----CSSCEEEEEECTTSS-CEEEEE-------------
T ss_pred CCEEEEEECC-CCCEEEEEcccccceEEeecccceeeeecC----CCCceeEEEEeecCc-cceeec-------------
Confidence 4566899999 776555544444 77778877654433222 112345667788888 444432
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecC--CcccceEEEecCCCe-EEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCee
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQG--LAFANGVALSRDRTF-ILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNV 202 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~--~~~~~gi~~~~d~~~-lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i 202 (310)
.++.+..||............ ......+++++++.. ++++....+.|..|+...... ...+..-.+....+
T Consensus 148 ----~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~--~~~~~~h~~~v~~~ 221 (340)
T 4aow_A 148 ----RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL--KTNHIGHTGYLNTV 221 (340)
T ss_dssp ----TTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEE
T ss_pred ----CCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce--eeEecCCCCcEEEE
Confidence 267788898865544333211 223457788877543 556666778999999764311 11121112334678
Q ss_pred EECCCCCEEEEEecCCc
Q 046018 203 RSNSNGEFWVALHAKKG 219 (310)
Q Consensus 203 ~~d~~G~l~va~~~~~~ 219 (310)
+++++|++.++....+.
T Consensus 222 ~~s~~~~~l~s~s~Dg~ 238 (340)
T 4aow_A 222 TVSPDGSLCASGGKDGQ 238 (340)
T ss_dssp EECTTSSEEEEEETTCE
T ss_pred EECCCCCEEEEEeCCCe
Confidence 99999988777666554
No 244
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.16 E-value=5.8e-05 Score=75.44 Aligned_cols=141 Identities=11% Similarity=0.055 Sum_probs=91.8
Q ss_pred eeceEEEeCCCCcEEEEECCCceE-EEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQ-VVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~-~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
.+..++++ +...|+.+.....++ .++.++++.+.+. . ....+..++++|+|++|+++.
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~----~~~~~~~~~~SpDG~~la~~~--------------- 397 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-E----NLGNVFAMGVDRNGKFAVVAN--------------- 397 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-C----CCCSEEEEEECTTSSEEEEEE---------------
T ss_pred eEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-C----CccceeeeEECCCCCEEEEEC---------------
Confidence 44566666 344566655544588 7888877655442 1 123567899999999666655
Q ss_pred cCCCCceEEEEeCCCCeEEEEecCCc-ccceEEEecCCCeEEEEecCC---------ceEEEEEccCCCCCcceeeeeCC
Q 046018 127 SGDKTGRLLKYEKTTKEVTILLQGLA-FANGVALSRDRTFILIAETSN---------CRILRFWLHGPNSGKQDVFAELP 196 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~~~~~~~~~-~~~gi~~~~d~~~lyv~~~~~---------~~i~~~~~~~~~~~~~~~~~~~~ 196 (310)
..+.|+.||.++++...+..... ....++++|||++|.++.... ..|++||.+++. ...+....
T Consensus 398 ---~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~~~~ 471 (1045)
T 1k32_A 398 ---DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAATTEN 471 (1045)
T ss_dssp ---TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECSCSS
T ss_pred ---CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc---EEEeeCCC
Confidence 25689999999888776653333 347899999999876664432 589999987532 22222222
Q ss_pred CCCCeeEECCCCC-EEEEEe
Q 046018 197 GFPDNVRSNSNGE-FWVALH 215 (310)
Q Consensus 197 ~~p~~i~~d~~G~-l~va~~ 215 (310)
.....++++++|+ |+++..
T Consensus 472 ~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 472 SHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp SBEEEEEECTTSCEEEEEES
T ss_pred cccCCceEcCCCCEEEEEec
Confidence 2345688999996 555554
No 245
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.16 E-value=0.00074 Score=56.73 Aligned_cols=157 Identities=11% Similarity=0.058 Sum_probs=91.4
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeC-CCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDE-HKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....++++ ++.|+.+...+.|..+| .+........ ....+..+++.+ +++.++++.
T Consensus 105 ~~i~~~~~~--~~~l~~~~~d~~i~~~d--~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~-------------- 162 (313)
T 3odt_A 105 GNVCSLSFQ--DGVVISGSWDKTAKVWK--EGSLVYNLQA----HNASVWDAKVVSFSENKFLTAS-------------- 162 (313)
T ss_dssp SCEEEEEEE--TTEEEEEETTSEEEEEE--TTEEEEEEEC----CSSCEEEEEEEETTTTEEEEEE--------------
T ss_pred cCEEEEEec--CCEEEEEeCCCCEEEEc--CCcEEEeccc----CCCceeEEEEccCCCCEEEEEE--------------
Confidence 445567774 34566665555577788 3333222221 112456777777 788444444
Q ss_pred hcCCCCceEEEEeCCCCeEEEEec-CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEE
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRS 204 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~ 204 (310)
.++.|..||.. .....+.. .......++++|++. ++ +...++.|.+||...+. ....+....+....+++
T Consensus 163 ----~d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~dg~i~i~d~~~~~--~~~~~~~~~~~i~~~~~ 233 (313)
T 3odt_A 163 ----ADKTIKLWQND-KVIKTFSGIHNDVVRHLAVVDDGH-FI-SCSNDGLIKLVDMHTGD--VLRTYEGHESFVYCIKL 233 (313)
T ss_dssp ----TTSCEEEEETT-EEEEEECSSCSSCEEEEEEEETTE-EE-EEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEE
T ss_pred ----CCCCEEEEecC-ceEEEEeccCcccEEEEEEcCCCe-EE-EccCCCeEEEEECCchh--hhhhhhcCCceEEEEEE
Confidence 26789999943 22333332 334467899999987 44 44677899999987431 11222222334577999
Q ss_pred CCCCCEEEEEecCCccceeeeeecc-ccccEEeeccc
Q 046018 205 NSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPL 240 (310)
Q Consensus 205 d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~ 240 (310)
+++|.|+.+..++. +..++ ..++.+..+..
T Consensus 234 ~~~~~l~~~~~dg~------v~iwd~~~~~~~~~~~~ 264 (313)
T 3odt_A 234 LPNGDIVSCGEDRT------VRIWSKENGSLKQVITL 264 (313)
T ss_dssp CTTSCEEEEETTSE------EEEECTTTCCEEEEEEC
T ss_pred ecCCCEEEEecCCE------EEEEECCCCceeEEEec
Confidence 99997666654433 44444 45665555433
No 246
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.13 E-value=0.00017 Score=72.17 Aligned_cols=138 Identities=14% Similarity=0.116 Sum_probs=90.2
Q ss_pred eeceEEEe-CCCCc-EEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 48 RPLGIRFD-KKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 48 ~p~gl~~d-~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.+..++++ + +|+ |.++. ...|+.++..++....+.. .....+..++++ +|++++++..
T Consensus 297 ~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~s-dg~~l~~~s~------------- 356 (1045)
T 1k32_A 297 SKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVLKVPE----PLRIRYVRRGGD-TKVAFIHGTR------------- 356 (1045)
T ss_dssp GGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEEECSC----CSCEEEEEECSS-SEEEEEEEET-------------
T ss_pred ccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceEEccC----CCcceEEeeeEc-CCCeEEEEEC-------------
Confidence 46689999 8 665 55544 4458888888776543311 111135567788 8876666541
Q ss_pred hcCCCCceEE-EEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeee-eCCCCCCeeE
Q 046018 126 LSGDKTGRLL-KYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFA-ELPGFPDNVR 203 (310)
Q Consensus 126 ~~~~~~g~v~-~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~p~~i~ 203 (310)
...++ .++.++++.+.+.........++++|||+.|+++ ...+.|+++|..++. ...+. ...+....++
T Consensus 357 -----~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~-~~~~~v~~~d~~tg~---~~~~~~~~~~~v~~~~ 427 (1045)
T 1k32_A 357 -----EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVA-NDRFEIMTVDLETGK---PTVIERSREAMITDFT 427 (1045)
T ss_dssp -----TEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEE-ETTSEEEEEETTTCC---EEEEEECSSSCCCCEE
T ss_pred -----CCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEE-CCCCeEEEEECCCCc---eEEeccCCCCCccceE
Confidence 45788 8999887766655333456789999999977766 456799999987542 22222 2223347899
Q ss_pred ECCCCCEEEEE
Q 046018 204 SNSNGEFWVAL 214 (310)
Q Consensus 204 ~d~~G~l~va~ 214 (310)
+++||+..+..
T Consensus 428 ~SpDG~~la~~ 438 (1045)
T 1k32_A 428 ISDNSRFIAYG 438 (1045)
T ss_dssp ECTTSCEEEEE
T ss_pred ECCCCCeEEEE
Confidence 99999854433
No 247
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.13 E-value=0.0011 Score=63.75 Aligned_cols=95 Identities=7% Similarity=-0.017 Sum_probs=61.4
Q ss_pred eEEEeCCCCc-EEEEECC---------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhh
Q 046018 51 GIRFDKKTGD-LYIADAY---------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQ 120 (310)
Q Consensus 51 gl~~d~~~g~-l~v~~~~---------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~ 120 (310)
.+++++ +|+ |.++... ..++.+|.++++.+++... .......+++|||++|.++.
T Consensus 66 ~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~-----~~~~~~~~~SPdG~~la~~~--------- 130 (740)
T 4a5s_A 66 DYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERI-----PNNTQWVTWSPVGHKLAYVW--------- 130 (740)
T ss_dssp EEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-----CTTEEEEEECSSTTCEEEEE---------
T ss_pred ceEECC-CCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccC-----CCcceeeEECCCCCEEEEEE---------
Confidence 478899 665 5444431 1267889998876543211 12356788999999776664
Q ss_pred hhhhhhcCCCCceEEEEeCCCCeEEEEecCC-------------------cccceEEEecCCCeEEEEe
Q 046018 121 FMSSILSGDKTGRLLKYEKTTKEVTILLQGL-------------------AFANGVALSRDRTFILIAE 170 (310)
Q Consensus 121 ~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~-------------------~~~~gi~~~~d~~~lyv~~ 170 (310)
.+.|+.++.++++...+.... ....+++|+|||+.|.++.
T Consensus 131 ----------~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 131 ----------NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp ----------TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred ----------CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 567999998877765543221 1123588999999876653
No 248
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.12 E-value=0.0002 Score=61.88 Aligned_cols=138 Identities=10% Similarity=0.184 Sum_probs=82.4
Q ss_pred CCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCC----CC---EEEEEeCCCchhhhhhhhhhhcCC
Q 046018 58 TGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEH----KG---VIYFTDSSTSFQRRQFMSSILSGD 129 (310)
Q Consensus 58 ~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~----g~---~l~v~~~~~~~~~~~~~~~~~~~~ 129 (310)
...+++++.. .|++.+|.++..+..+ . . ..+|++.+-++ |+ .+++++.. +
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~-~---~---g~~nnVD~r~~~~l~g~~~dla~as~R~---------------~ 96 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSY-N---T---GKLNNVDIRYDFPLNGKKVDIAAASNRS---------------E 96 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEE-C---C---SCEEEEEEEEEEEETTEEEEEEEEEECS---------------T
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEc-c---C---CCcccEEEecccccCCceEeEEEEeCCC---------------C
Confidence 3456666655 5799999976554433 1 1 24566665542 11 24555521 0
Q ss_pred CCceE--EEEeCCCCeEEEEe-------cCCcccceEEE--ecC-CC-eEEEEecCCceEEEEEccCCCC--Ccceeeee
Q 046018 130 KTGRL--LKYEKTTKEVTILL-------QGLAFANGVAL--SRD-RT-FILIAETSNCRILRFWLHGPNS--GKQDVFAE 194 (310)
Q Consensus 130 ~~g~v--~~~d~~~~~~~~~~-------~~~~~~~gi~~--~~d-~~-~lyv~~~~~~~i~~~~~~~~~~--~~~~~~~~ 194 (310)
..++| +.+|++++.++.+. .....|.|+|+ +++ ++ ++|+++ .++.+..|++..... -..+.+..
T Consensus 97 ~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~-k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 97 GKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG-KEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp TCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC-SSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC-CCCeEEEEEEEeCCCCcccceEEEE
Confidence 13444 55588887776652 22367899999 664 43 467664 458999987742111 12233333
Q ss_pred --CCCCCCeeEECC-CCCEEEEEecCC
Q 046018 195 --LPGFPDNVRSNS-NGEFWVALHAKK 218 (310)
Q Consensus 195 --~~~~p~~i~~d~-~G~l~va~~~~~ 218 (310)
+++.|.++++|+ .|.||++....+
T Consensus 176 f~lgsq~EgcvvDd~~g~Lyv~eEd~G 202 (355)
T 3amr_A 176 FKMNSQTEGMAADDEYGRLYIAEEDEA 202 (355)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTTE
T ss_pred ecCCCCcceEEEcCCCCeEEEecccce
Confidence 567789999985 579999998755
No 249
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.10 E-value=0.00041 Score=59.66 Aligned_cols=59 Identities=10% Similarity=0.094 Sum_probs=37.8
Q ss_pred ceeceEEEeCCCCcE-EEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEE--eCCCCEEEEEe
Q 046018 47 GRPLGIRFDKKTGDL-YIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDI--DEHKGVIYFTD 111 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l-~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~--d~~g~~l~v~~ 111 (310)
.....+++++ +++. +.+...+.|..+|.++++...+... ...+..+++ +++++.++.+.
T Consensus 87 ~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 87 GPVLDVCWSD-DGSKVFTASCDKTAKMWDLSSNQAIQIAQH-----DAPVKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEEC-----SSCEEEEEEEECSSCEEEEEEE
T ss_pred CCEEEEEECc-CCCEEEEEcCCCcEEEEEcCCCCceeeccc-----cCceEEEEEEeCCCCCEEEEcc
Confidence 4567899999 6654 4444444588889998876544221 124677888 88888444443
No 250
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.08 E-value=0.0003 Score=67.78 Aligned_cols=151 Identities=10% Similarity=0.105 Sum_probs=91.4
Q ss_pred ceeceEEEeCC-CCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCC--CCEEEEEeCCCchhhhhhh
Q 046018 47 GRPLGIRFDKK-TGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEH--KGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 47 ~~p~gl~~d~~-~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~--g~~l~v~~~~~~~~~~~~~ 122 (310)
.....++++++ ++++.++... +.|..+|.+++......... . ....+..++++|+ ++.++++.
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~-~-h~~~V~~v~~sp~~~~~~l~sgs----------- 120 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHA-V-HSASVNSVQWAPHEYGPLLLVAS----------- 120 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEEC-C-CSSCEEEEEECCGGGCSEEEEEE-----------
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccccccc-C-CCCCeEEEEECCCCCCCEEEEEe-----------
Confidence 45668888773 1555554444 44888888877643332221 1 1235788999999 88444443
Q ss_pred hhhhcCCCCceEEEEeCCCCe---EEEEecCCcccceEEEec-------------CCCeEEEEecCCceEEEEEccCCCC
Q 046018 123 SSILSGDKTGRLLKYEKTTKE---VTILLQGLAFANGVALSR-------------DRTFILIAETSNCRILRFWLHGPNS 186 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~---~~~~~~~~~~~~gi~~~~-------------d~~~lyv~~~~~~~i~~~~~~~~~~ 186 (310)
.+|.|..||..++. ...+.........++++| +++.++ +...++.|..||...+..
T Consensus 121 -------~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~-sgs~dg~I~iwd~~~~~~ 192 (753)
T 3jro_A 121 -------SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV-TGGADNLVKIWKYNSDAQ 192 (753)
T ss_dssp -------TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEE-EEETTSCEEEEEEETTTT
T ss_pred -------CCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEE-EEECCCeEEEEeccCCcc
Confidence 37889999987652 222223334467888988 466444 446778999999875321
Q ss_pred CcceeeeeC---CCCCCeeEECCC---CCEEEEEecCCc
Q 046018 187 GKQDVFAEL---PGFPDNVRSNSN---GEFWVALHAKKG 219 (310)
Q Consensus 187 ~~~~~~~~~---~~~p~~i~~d~~---G~l~va~~~~~~ 219 (310)
........ .+....++++++ |++.++....+.
T Consensus 193 -~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 193 -TYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp -EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC
T ss_pred -cceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE
Confidence 11222221 233567899999 777776665554
No 251
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.08 E-value=0.00084 Score=64.46 Aligned_cols=123 Identities=11% Similarity=-0.003 Sum_probs=79.8
Q ss_pred eceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccc-cCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhc
Q 046018 49 PLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPL-RFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILS 127 (310)
Q Consensus 49 p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~-~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~ 127 (310)
...+++.+ +|++++.. .+.|..+|..+++.+.+......... ...++++++|||++|.++..... +..
T Consensus 19 ~~~~~w~~-dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~---------~~r 87 (740)
T 4a5s_A 19 LYSLRWIS-DHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVK---------QWR 87 (740)
T ss_dssp CCCEEECS-SSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEE---------CSS
T ss_pred ccccEECC-CCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCee---------eEE
Confidence 34688888 77766665 44589999998887655443211111 12345889999997777653110 000
Q ss_pred CCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCC
Q 046018 128 GDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 128 ~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~ 184 (310)
....+.++.||.++++.+.+..........+++|||+.|.++. ++.|++++..++
T Consensus 88 ~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~ 142 (740)
T 4a5s_A 88 HSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNL 142 (740)
T ss_dssp SCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE--TTEEEEESSTTS
T ss_pred EccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE--CCeEEEEECCCC
Confidence 1124678999999988765543333456789999999776652 478999987654
No 252
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.05 E-value=0.0017 Score=55.04 Aligned_cols=149 Identities=10% Similarity=0.037 Sum_probs=82.8
Q ss_pred ceeceEEEeCC-CCcEEEEECC-CceEEEeCCCCeE-------EEEEeecCCccccCCcceEEeCC--CCEEEEEeCCCc
Q 046018 47 GRPLGIRFDKK-TGDLYIADAY-LGFQVVGPEGGLA-------TQLVTEAAGQPLRFTNDLDIDEH--KGVIYFTDSSTS 115 (310)
Q Consensus 47 ~~p~gl~~d~~-~g~l~v~~~~-~gi~~~d~~~~~~-------~~~~~~~~~~~~~~~~~i~~d~~--g~~l~v~~~~~~ 115 (310)
..+..+++.+. +++++++... +.|..+|.+++.. ..+... .. ....+.+++++|+ ++.++.+.
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~~l~~~~---- 131 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL-ND-SKGSLYSVKFAPAHLGLKLACLG---- 131 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE-CC-CSSCEEEEEECCGGGCSEEEEEE----
T ss_pred CcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeee-cc-cCCceeEEEEcCCCCCcEEEEec----
Confidence 45668888873 2555544444 4477778776521 112111 11 1235778999999 88444443
Q ss_pred hhhhhhhhhhhcCCCCceEEEEeCCCCeEEE-------Ee-------cCCcccceEEEecC---CCeEEEEecCCceEEE
Q 046018 116 FQRRQFMSSILSGDKTGRLLKYEKTTKEVTI-------LL-------QGLAFANGVALSRD---RTFILIAETSNCRILR 178 (310)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~-------~~-------~~~~~~~gi~~~~d---~~~lyv~~~~~~~i~~ 178 (310)
.++.|..||..+++... .. ........++++|+ ++.++++ ..++.+..
T Consensus 132 --------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~-~~~~~~~~ 196 (351)
T 3f3f_A 132 --------------NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVS-ALEQAIIY 196 (351)
T ss_dssp --------------TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEE-ETTEEEEE
T ss_pred --------------CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEe-cCCCcEEE
Confidence 27789999976553210 00 11223468899997 7745544 55566644
Q ss_pred EEccCCCCCcceeeeeCC---CCCCeeEECCCC----CEEEEEecCCc
Q 046018 179 FWLHGPNSGKQDVFAELP---GFPDNVRSNSNG----EFWVALHAKKG 219 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~---~~p~~i~~d~~G----~l~va~~~~~~ 219 (310)
++.... ......... .....++++++| ++.++....+.
T Consensus 197 ~~~~~~---~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 197 QRGKDG---KLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp EECTTS---CEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred EccCCC---ceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 443322 222222222 334678999998 66666655554
No 253
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.04 E-value=0.0057 Score=54.21 Aligned_cols=144 Identities=10% Similarity=0.030 Sum_probs=89.5
Q ss_pred eEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCC
Q 046018 51 GIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDK 130 (310)
Q Consensus 51 gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~ 130 (310)
=|++++ ++.|-|+ ..+.|+.+|..+++...+.... .....+.+|+++|+|++|.++. .
T Consensus 110 ~l~wS~-~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~--~~~~~V~sv~fspdg~~lasgs------------------~ 167 (420)
T 4gga_A 110 LVDWSS-GNVLAVA-LDNSVYLWSASSGDILQLLQME--QPGEYISSVAWIKEGNYLAVGT------------------S 167 (420)
T ss_dssp CEEECT-TSEEEEE-ETTEEEEEETTTCCEEEEEECC--STTCCEEEEEECTTSSEEEEEE------------------T
T ss_pred eEEECC-CCEEEEE-eCCEEEEEECCCCCEEEEEEec--CCCCcEEEEEECCCCCEEEEEE------------------C
Confidence 366766 5544444 4556999999999876654431 1223578999999999444444 3
Q ss_pred CceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCE
Q 046018 131 TGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEF 210 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l 210 (310)
++.|..||.++++........ ...-.+++.++. ++++....+.+..++...... ....+.........+.+.++|++
T Consensus 168 Dg~v~iWd~~~~~~~~~~~~h-~~~v~~~s~~~~-~l~sgs~d~~i~~~d~~~~~~-~~~~~~~h~~~~~~~~~~~~g~~ 244 (420)
T 4gga_A 168 SAEVQLWDVQQQKRLRNMTSH-SARVGSLSWNSY-ILSSGSRSGHIHHHDVRVAEH-HVATLSGHSQEVCGLRWAPDGRH 244 (420)
T ss_dssp TSCEEEEETTTTEEEEEECCC-SSCEEEEEEETT-EEEEEETTSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTTSSE
T ss_pred CCeEEEEEcCCCcEEEEEeCC-CCceEEEeeCCC-EEEEEeCCCceeEeeecccce-eeEEecccccceeeeeecCCCCe
Confidence 788999999888765443322 223345566677 555557788999998764211 11112222233466788888887
Q ss_pred EEEEecCCc
Q 046018 211 WVALHAKKG 219 (310)
Q Consensus 211 ~va~~~~~~ 219 (310)
.++....+.
T Consensus 245 l~s~~~D~~ 253 (420)
T 4gga_A 245 LASGGNDNL 253 (420)
T ss_dssp EEEEETTSC
T ss_pred eeeeecccc
Confidence 776665554
No 254
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.04 E-value=0.0065 Score=54.35 Aligned_cols=84 Identities=12% Similarity=0.131 Sum_probs=51.2
Q ss_pred CceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCC
Q 046018 131 TGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGE 209 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~ 209 (310)
++.|..||..+++....... ......++++|+++.++. ...++.|.+||...+. ....+.........+.++ ++
T Consensus 289 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-g~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~--~~ 363 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCIS-ASMDTTIRIWDLENGE--LMYTLQGHTALVGLLRLS--DK 363 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEE-EETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEC--SS
T ss_pred CCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEE-EeCCCcEEEEECCCCc--EEEEEeCCCCcEEEEEEc--CC
Confidence 77899999987766543332 334678999999995554 4677899999986431 111121112233556665 45
Q ss_pred EEEEEecCCc
Q 046018 210 FWVALHAKKG 219 (310)
Q Consensus 210 l~va~~~~~~ 219 (310)
..++....+.
T Consensus 364 ~l~s~s~dg~ 373 (464)
T 3v7d_B 364 FLVSAAADGS 373 (464)
T ss_dssp EEEEEETTSE
T ss_pred EEEEEeCCCc
Confidence 5555544443
No 255
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.03 E-value=0.00011 Score=62.84 Aligned_cols=160 Identities=12% Similarity=-0.004 Sum_probs=93.1
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCC---------CeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEG---------GLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQ 117 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~---------~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~ 117 (310)
.....+++++ .+.|+.+...+.|..+|.++ ++. + .... ....+..+++++++ ++++.
T Consensus 102 ~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~-~~~~--~~~~v~~~~~~~~~--l~~~~------ 167 (342)
T 1yfq_A 102 LGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN--S-NNTK--VKNKIFTMDTNSSR--LIVGM------ 167 (342)
T ss_dssp SCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESC--S-SSSS--SCCCEEEEEECSSE--EEEEE------
T ss_pred CceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCe--e-eEEe--eCCceEEEEecCCc--EEEEe------
Confidence 4566888888 65666665555577777654 221 1 0111 12246778888776 55554
Q ss_pred hhhhhhhhhcCCCCceEEEEeCCC-Ce--EEEEe-cCCcccceEEEec-CCCeEEEEecCCceEEEEEccCC--C--CCc
Q 046018 118 RRQFMSSILSGDKTGRLLKYEKTT-KE--VTILL-QGLAFANGVALSR-DRTFILIAETSNCRILRFWLHGP--N--SGK 188 (310)
Q Consensus 118 ~~~~~~~~~~~~~~g~v~~~d~~~-~~--~~~~~-~~~~~~~gi~~~~-d~~~lyv~~~~~~~i~~~~~~~~--~--~~~ 188 (310)
.++.|..||..+ +. ..... ........++++| +++.++++ ..++.|.+|+.+.. . ...
T Consensus 168 ------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~ 234 (342)
T 1yfq_A 168 ------------NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS-SIDGRVAVEFFDDQGDDYNSSK 234 (342)
T ss_dssp ------------STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE-ETTSEEEEEECCTTCCSTTCTT
T ss_pred ------------CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE-ecCCcEEEEEEcCCCccccccc
Confidence 267899999876 32 22222 2233468899999 99855554 66789999888643 1 011
Q ss_pred ceeeeeCC---------CCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeec
Q 046018 189 QDVFAELP---------GFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKL 238 (310)
Q Consensus 189 ~~~~~~~~---------~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~ 238 (310)
...+.... .....++++++|++.++....+. +..++ ..++.+..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-----i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-----ISCWNLQTRKKIKNF 289 (342)
T ss_dssp CEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-----EEEEETTTTEEEEEC
T ss_pred ceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-----EEEEcCccHhHhhhh
Confidence 12222211 13467899999976666555554 44444 345555544
No 256
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.03 E-value=0.00035 Score=66.58 Aligned_cols=157 Identities=8% Similarity=0.006 Sum_probs=86.8
Q ss_pred eeceEEEeCCCCcEEEEEC-C----CceEEEeCCCCeEEEEEeecCCcccc-CCcceEEeCCCCEEEEE-eCCCchhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADA-Y----LGFQVVGPEGGLATQLVTEAAGQPLR-FTNDLDIDEHKGVIYFT-DSSTSFQRRQ 120 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~-~----~gi~~~d~~~~~~~~~~~~~~~~~~~-~~~~i~~d~~g~~l~v~-~~~~~~~~~~ 120 (310)
....+++++ +|++++... . ..|+.+|..+++...+.......... .+..++++|||++|++. ......
T Consensus 256 ~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~---- 330 (723)
T 1xfd_A 256 YITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG---- 330 (723)
T ss_dssp EEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS----
T ss_pred eeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC----
Confidence 455789999 887654432 1 13888899888766554321111110 12478999999977765 321000
Q ss_pred hhhhhhcCCCCceEEEEe-CCCCe---EEEEecCCccc-ceEEEecCCCeEEEEecCC--c--eEEEEEccCCCCCccee
Q 046018 121 FMSSILSGDKTGRLLKYE-KTTKE---VTILLQGLAFA-NGVALSRDRTFILIAETSN--C--RILRFWLHGPNSGKQDV 191 (310)
Q Consensus 121 ~~~~~~~~~~~g~v~~~d-~~~~~---~~~~~~~~~~~-~gi~~~~d~~~lyv~~~~~--~--~i~~~~~~~~~~~~~~~ 191 (310)
......|+.+| .+++. .+.+....... ..++++||++.||++.... + .||.++.+++. ....
T Consensus 331 -------~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~--~~~~ 401 (723)
T 1xfd_A 331 -------RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF--NRQC 401 (723)
T ss_dssp -------SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTC--CCBC
T ss_pred -------CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCC--Ccce
Confidence 00123689998 45554 44333221122 2368999999988765543 3 45555444321 1122
Q ss_pred eee-C--CCCCCeeEECCCCCEEEEEecCC
Q 046018 192 FAE-L--PGFPDNVRSNSNGEFWVALHAKK 218 (310)
Q Consensus 192 ~~~-~--~~~p~~i~~d~~G~l~va~~~~~ 218 (310)
+.. . ......+.++++|+.++....+.
T Consensus 402 l~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 431 (723)
T 1xfd_A 402 LSCDLVENCTYFSASFSHSMDFFLLKCEGP 431 (723)
T ss_dssp SSTTSSSSCCCCEEEECTTSSEEEEECCSS
T ss_pred ecccccCCCCeEEEEECCCCCEEEEEccCC
Confidence 221 1 22346789999998777655543
No 257
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.02 E-value=0.006 Score=54.39 Aligned_cols=154 Identities=10% Similarity=0.060 Sum_probs=83.6
Q ss_pred eeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhc
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILS 127 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~ 127 (310)
....+++++ +.|.++...+.|..+|.++++........ ...+..+++ +++.++.+.
T Consensus 201 ~v~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~~~~----~~~v~~~~~--~~~~l~~~~---------------- 256 (445)
T 2ovr_B 201 TVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGH----VAAVRCVQY--DGRRVVSGA---------------- 256 (445)
T ss_dssp CEEEEEEET--TEEEEEETTSEEEEEESSSCCEEEEEECC----SSCEEEEEE--CSSCEEEEE----------------
T ss_pred cEEEEEecC--CEEEEEeCCCEEEEEECCCCcEEEEEcCC----cccEEEEEE--CCCEEEEEc----------------
Confidence 344666654 45666665556888898877654333221 123445555 566355444
Q ss_pred CCCCceEEEEeCCCCeEEEEecCC-cccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECC
Q 046018 128 GDKTGRLLKYEKTTKEVTILLQGL-AFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNS 206 (310)
Q Consensus 128 ~~~~g~v~~~d~~~~~~~~~~~~~-~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~ 206 (310)
.++.|..||..+++........ .....+++ +++.++.+ ..++.|..||...+.. ...+.........+.+
T Consensus 257 --~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~-- 327 (445)
T 2ovr_B 257 --YDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSG-SLDTSIRVWDVETGNC--IHTLTGHQSLTSGMEL-- 327 (445)
T ss_dssp --TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEE-ETTSCEEEEETTTCCE--EEEECCCCSCEEEEEE--
T ss_pred --CCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEE-eCCCeEEEEECCCCCE--EEEEcCCcccEEEEEE--
Confidence 2778999998877654433322 22345555 77755554 6678999999874311 1112111122233444
Q ss_pred CCCEEEEEecCCccceeeeeecc-ccccEEeecc
Q 046018 207 NGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLP 239 (310)
Q Consensus 207 ~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~ 239 (310)
++++.++....+. +..++ ..++.+..+.
T Consensus 328 ~~~~l~~~~~dg~-----i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 328 KDNILVSGNADST-----VKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp ETTEEEEEETTSC-----EEEEETTTCCEEEEEC
T ss_pred eCCEEEEEeCCCe-----EEEEECCCCcEEEEEc
Confidence 4556565555554 44443 4566655554
No 258
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.02 E-value=0.00012 Score=64.09 Aligned_cols=151 Identities=13% Similarity=0.041 Sum_probs=81.4
Q ss_pred EEEeCCCC-cEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCC---------Cchhh-hh
Q 046018 52 IRFDKKTG-DLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSS---------TSFQR-RQ 120 (310)
Q Consensus 52 l~~d~~~g-~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~---------~~~~~-~~ 120 (310)
+.+++ +| .|+++.....|+.+|.++++.+.+...... ..++|++|.++... ..|.. ..
T Consensus 86 ~~~sp-dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~----------~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~ 154 (396)
T 3c5m_A 86 GFIST-DERAFFYVKNELNLMKVDLETLEEQVIYTVDEE----------WKGYGTWVANSDCTKLVGIEILKRDWQPLTS 154 (396)
T ss_dssp CEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTT----------EEEEEEEEECTTSSEEEEEEEEGGGCCCCCS
T ss_pred ceECC-CCCEEEEEEcCCcEEEEECCCCCcEEEEecccc----------cCCCCCEEEeccCCccccccccccccCCCCc
Confidence 77888 55 465655555699999988876655442111 22233222221100 00000 00
Q ss_pred hhhhhh--cCCCCceEEEEeCCCCeEEEEecCCcccceEEEec-CCCeEEEEecCC-----ceEEEEEccCCCCCcceee
Q 046018 121 FMSSIL--SGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSR-DRTFILIAETSN-----CRILRFWLHGPNSGKQDVF 192 (310)
Q Consensus 121 ~~~~~~--~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~-d~~~lyv~~~~~-----~~i~~~~~~~~~~~~~~~~ 192 (310)
++.... .......|+.+|.++++.+.+.........++++| |++.|+++.... ..|+.++.+++.. ..+
T Consensus 155 ~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l 231 (396)
T 3c5m_A 155 WEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV---RKI 231 (396)
T ss_dssp HHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC---EES
T ss_pred ceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce---eEe
Confidence 000000 11245679999998888776654444567889999 777665543322 4799999875421 222
Q ss_pred ee-CC-CCCCeeEECCCCC-EEEEEec
Q 046018 193 AE-LP-GFPDNVRSNSNGE-FWVALHA 216 (310)
Q Consensus 193 ~~-~~-~~p~~i~~d~~G~-l~va~~~ 216 (310)
.. .+ ..+..++++++|+ |+++...
T Consensus 232 ~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 232 KEHAEGESCTHEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp SCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred eccCCCccccceEECCCCCEEEEEecC
Confidence 11 11 1234578999996 5555544
No 259
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.01 E-value=0.00051 Score=65.61 Aligned_cols=195 Identities=9% Similarity=0.026 Sum_probs=104.4
Q ss_pred ccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCCc----------------eEEEeCCCCeE--EEEEeecCC
Q 046018 28 TSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYLG----------------FQVVGPEGGLA--TQLVTEAAG 89 (310)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~g----------------i~~~d~~~~~~--~~~~~~~~~ 89 (310)
.|..+|..+.+............+++++++...|+++..... |++++..++.. +.+.... .
T Consensus 152 ~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~-~ 230 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP-D 230 (710)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT-T
T ss_pred EEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC-C
Confidence 455566655332221111122457999993345766654432 88888877642 1222211 1
Q ss_pred ccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCC------C--eEEEEecCCcccceEEEec
Q 046018 90 QPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTT------K--EVTILLQGLAFANGVALSR 161 (310)
Q Consensus 90 ~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~------~--~~~~~~~~~~~~~gi~~~~ 161 (310)
......+++++|||++|+++.... ......|+.+|.++ + ..+.+..... .....+++
T Consensus 231 -~~~~~~~~~~SpDg~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~ 295 (710)
T 2xdw_A 231 -EPKWMGGAELSDDGRYVLLSIREG-------------CDPVNRLWYCDLQQESNGITGILKWVKLIDNFE-GEYDYVTN 295 (710)
T ss_dssp -CTTCEEEEEECTTSCEEEEEEECS-------------SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-SCEEEEEE
T ss_pred -CCeEEEEEEEcCCCCEEEEEEEcc-------------CCCccEEEEEECcccccccCCccceEEeeCCCC-cEEEEEec
Confidence 011345788999999777765321 00145799999875 4 3454443322 23345889
Q ss_pred CCCeEEEEecC---CceEEEEEccCCCCCcceeeee-CC-CCCCeeEECCCCCEEEEEecCCccceeeeeeccc-cccEE
Q 046018 162 DRTFILIAETS---NCRILRFWLHGPNSGKQDVFAE-LP-GFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSW-LGKTL 235 (310)
Q Consensus 162 d~~~lyv~~~~---~~~i~~~~~~~~~~~~~~~~~~-~~-~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~-~g~~~ 235 (310)
||+.||+.... +..|++++.+++.....+.+.. .+ ....++.+.+++.|+++....+.. + +...+. .|+.+
T Consensus 296 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~--~-l~~~~~~~g~~~ 372 (710)
T 2xdw_A 296 EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKN--T-LQLHDLATGALL 372 (710)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEE--E-EEEEETTTCCEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEE--E-EEEEECCCCCEE
Confidence 99988886443 3479999987542111222222 21 123456666667777766554421 1 344443 56655
Q ss_pred eeccch
Q 046018 236 LKLPLS 241 (310)
Q Consensus 236 ~~~~~~ 241 (310)
..+..+
T Consensus 373 ~~l~~~ 378 (710)
T 2xdw_A 373 KIFPLE 378 (710)
T ss_dssp EEECCC
T ss_pred EecCCC
Confidence 555544
No 260
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.00 E-value=0.00011 Score=66.54 Aligned_cols=165 Identities=16% Similarity=0.182 Sum_probs=93.2
Q ss_pred ccccceeceEEEeCCCC--cEEEEECCCceEEEeCCCCeE-EEEEeec----CC---ccccCCcceEEeCC----CCEEE
Q 046018 43 EHICGRPLGIRFDKKTG--DLYIADAYLGFQVVGPEGGLA-TQLVTEA----AG---QPLRFTNDLDIDEH----KGVIY 108 (310)
Q Consensus 43 ~~~~~~p~gl~~d~~~g--~l~v~~~~~gi~~~d~~~~~~-~~~~~~~----~~---~~~~~~~~i~~d~~----g~~l~ 108 (310)
..-...|.+|++.+ +| +|||+...+.|.+++.++... +.+.... .+ .....+.+|+++|+ +. ||
T Consensus 10 a~gL~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~-lY 87 (463)
T 2wg3_C 10 VSGLRQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK-LY 87 (463)
T ss_dssp EEEESSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE-EE
T ss_pred ccCCCCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE-EE
Confidence 33457899999999 66 599998876788888765421 1222221 01 01234678999986 65 99
Q ss_pred EEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCC--------eEEEEec-----CCcccceEEEecCCCeEEEEecC---
Q 046018 109 FTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTK--------EVTILLQ-----GLAFANGVALSRDRTFILIAETS--- 172 (310)
Q Consensus 109 v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--------~~~~~~~-----~~~~~~gi~~~~d~~~lyv~~~~--- 172 (310)
++.+...-... .-......+|.+|..+.+ +.+++.. .......|+|.|||. |||+.-.
T Consensus 88 v~yt~~~~~~~-----~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd~~~ 161 (463)
T 2wg3_C 88 VSYTTNQERWA-----IGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGDGMI 161 (463)
T ss_dssp EEEEECCCSSC-----SSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECCTTC
T ss_pred EEEeCCCCCcc-----cCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCCCCC
Confidence 98632100000 000000136777764321 1222221 122346799999997 9997321
Q ss_pred --------------CceEEEEEccCCC------C-----------CcceeeeeCCCCCCeeEECCC-----CCEEE--EE
Q 046018 173 --------------NCRILRFWLHGPN------S-----------GKQDVFAELPGFPDNVRSNSN-----GEFWV--AL 214 (310)
Q Consensus 173 --------------~~~i~~~~~~~~~------~-----------~~~~~~~~~~~~p~~i~~d~~-----G~l~v--a~ 214 (310)
.++|.++++++.. . ...++++.--..|.++++|+. |+||+ ++
T Consensus 162 ~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D 241 (463)
T 2wg3_C 162 TLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSD 241 (463)
T ss_dssp CHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEEC
T ss_pred CCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecc
Confidence 3679999998731 0 012344432346899999997 65544 55
Q ss_pred e
Q 046018 215 H 215 (310)
Q Consensus 215 ~ 215 (310)
.
T Consensus 242 ~ 242 (463)
T 2wg3_C 242 S 242 (463)
T ss_dssp C
T ss_pred c
Confidence 3
No 261
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.99 E-value=0.00086 Score=59.65 Aligned_cols=163 Identities=9% Similarity=0.089 Sum_probs=88.3
Q ss_pred ceeceEEEeCCCCcEEEEECCCc-eEEEeCCC---Ce-EEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLG-FQVVGPEG---GL-ATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQF 121 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~---~~-~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~ 121 (310)
.....+++++.++.++++....+ |..+|..+ +. ........ ....+.++++.++++.|+.+.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~s---------- 130 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD---CSSTVTQITMIPNFDAFAVSS---------- 130 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE---CSSCEEEEEECTTSSEEEEEE----------
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc---CCCCEEEEEEeCCCCEEEEEe----------
Confidence 56778999883444444444444 77777654 22 10011100 122578899999999444443
Q ss_pred hhhhhcCCCCceEEEEeCC---CCeEEEEec-------------CCcccceEE--EecCCCeEEEEecCCceEEEEEccC
Q 046018 122 MSSILSGDKTGRLLKYEKT---TKEVTILLQ-------------GLAFANGVA--LSRDRTFILIAETSNCRILRFWLHG 183 (310)
Q Consensus 122 ~~~~~~~~~~g~v~~~d~~---~~~~~~~~~-------------~~~~~~gi~--~~~d~~~lyv~~~~~~~i~~~~~~~ 183 (310)
.++.|..||.+ +++...... .......+. ++++++ ++++...++.|.+||+..
T Consensus 131 --------~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~ 201 (437)
T 3gre_A 131 --------KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRT 201 (437)
T ss_dssp --------TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTT
T ss_pred --------CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCC
Confidence 26778888763 232221110 111122333 446777 444556789999999874
Q ss_pred CCCCcceeeee--CCCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeec
Q 046018 184 PNSGKQDVFAE--LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKL 238 (310)
Q Consensus 184 ~~~~~~~~~~~--~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~ 238 (310)
... ...+.. -.+....++++++|++.++....+. +..++ ..++.+..+
T Consensus 202 ~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~-----i~iwd~~~~~~~~~~ 252 (437)
T 3gre_A 202 LER--LQIIENSPRHGAVSSICIDEECCVLILGTTRGI-----IDIWDIRFNVLIRSW 252 (437)
T ss_dssp CCE--EEEEECCGGGCCEEEEEECTTSCEEEEEETTSC-----EEEEETTTTEEEEEE
T ss_pred Cee--eEEEccCCCCCceEEEEECCCCCEEEEEcCCCe-----EEEEEcCCccEEEEE
Confidence 321 122221 1234577899999987776666554 33333 445555544
No 262
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.99 E-value=0.0078 Score=53.64 Aligned_cols=221 Identities=10% Similarity=0.056 Sum_probs=109.7
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
.....+++++ +.|+.+...+.|..+|.++++....... ....+..++++ ++.++.+.
T Consensus 160 ~~v~~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~~----h~~~v~~~~~~--~~~l~s~s--------------- 216 (445)
T 2ovr_B 160 GGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYG----HTSTVRCMHLH--EKRVVSGS--------------- 216 (445)
T ss_dssp SCEEEEEEET--TEEEEEETTSCEEEEETTTTEEEEEECC----CSSCEEEEEEE--TTEEEEEE---------------
T ss_pred CCEEEEEecC--CEEEEEeCCCeEEEEECCcCcEEEEECC----CCCcEEEEEec--CCEEEEEe---------------
Confidence 3445677753 4556665555688899988865433221 11234556664 45355444
Q ss_pred cCCCCceEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEEC
Q 046018 127 SGDKTGRLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSN 205 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d 205 (310)
.++.|..||..+++....... ......+++ +++.++.+ ..++.|..||...+.. ...+.........+.+
T Consensus 217 ---~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~-~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~- 287 (445)
T 2ovr_B 217 ---RDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSG-AYDFMVKVWDPETETC--LHTLQGHTNRVYSLQF- 287 (445)
T ss_dssp ---TTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEE-ETTSCEEEEEGGGTEE--EEEECCCSSCEEEEEE-
T ss_pred ---CCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEE-cCCCEEEEEECCCCcE--eEEecCCCCceEEEEE-
Confidence 378899999887765443322 233455665 66655544 6778999999864311 1111111122344555
Q ss_pred CCCCEEEEEecCCccceeeeeecc-ccccEEeeccchhhhhcccccC------CCCceEEEEECC-CCCEEEEEEcCCCC
Q 046018 206 SNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPLSFRQLHSLLVG------GKPHATAIKLSE-KGEVLEVLEDCEGK 277 (310)
Q Consensus 206 ~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~-~g~~~~~~~~~~g~ 277 (310)
+|+..++....+. +..++ ..++.+..+.........+.+. +..+..+..+|. +++.+..+..+.+
T Consensus 288 -~~~~l~~~~~d~~-----i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~- 360 (445)
T 2ovr_B 288 -DGIHVVSGSLDTS-----IRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNK- 360 (445)
T ss_dssp -CSSEEEEEETTSC-----EEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTS-
T ss_pred -CCCEEEEEeCCCe-----EEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCC-
Confidence 5655555544444 34433 4555554443222211111111 111111222232 3444444432111
Q ss_pred eecceeEEEEeCCEEEEecCCCCeEEEecc
Q 046018 278 TLSFISEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 278 ~~~~~~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
....++.+...+..|..|+. +..|.+++.
T Consensus 361 ~~~~v~~~~~~~~~l~s~~~-dg~v~iwd~ 389 (445)
T 2ovr_B 361 HQSAVTCLQFNKNFVITSSD-DGTVKLWDL 389 (445)
T ss_dssp CSSCEEEEEECSSEEEEEET-TSEEEEEET
T ss_pred CCCCEEEEEECCCEEEEEeC-CCeEEEEEC
Confidence 11234555555556666654 666777764
No 263
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.99 E-value=0.0029 Score=54.23 Aligned_cols=116 Identities=8% Similarity=0.049 Sum_probs=77.1
Q ss_pred cceeceEEEeCCC--CcEEEEECC-CceEEEeCCC-CeEE-EEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhh
Q 046018 46 CGRPLGIRFDKKT--GDLYIADAY-LGFQVVGPEG-GLAT-QLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQ 120 (310)
Q Consensus 46 ~~~p~gl~~d~~~--g~l~v~~~~-~gi~~~d~~~-~~~~-~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~ 120 (310)
......++++++. |++.++... +.|..+|.++ +... ..... ....+..++++|++++|+.+.
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~~--------- 105 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM----HTGPVLDVCWSDDGSKVFTAS--------- 105 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEE----CSSCEEEEEECTTSSEEEEEE---------
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecc----ccCCEEEEEECcCCCEEEEEc---------
Confidence 3567789999943 455555444 4477777775 3322 22221 122578899999999444443
Q ss_pred hhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEE--ecCCCeEEEEecCCceEEEEEccCC
Q 046018 121 FMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVAL--SRDRTFILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 121 ~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~--~~d~~~lyv~~~~~~~i~~~~~~~~ 184 (310)
.++.|..||..+++.............+++ +++++.+ ++...++.|.+||...+
T Consensus 106 ---------~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 106 ---------CDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCV-MTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp ---------TTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEE-EEEETTSEEEEECSSCS
T ss_pred ---------CCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEE-EEccCCCcEEEEECCCC
Confidence 278899999998877665544455688999 8888744 44467789999998743
No 264
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.98 E-value=0.00061 Score=62.77 Aligned_cols=147 Identities=5% Similarity=-0.124 Sum_probs=89.9
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCCeE-EEEEeecCCccccCCcce--EEeCCC-CEEEEEeCCCchhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLA-TQLVTEAAGQPLRFTNDL--DIDEHK-GVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~-~~~~~~~~~~~~~~~~~i--~~d~~g-~~l~v~~~~~~~~~~~~~ 122 (310)
.....+++++ ++.|..+...+.|..+|.+++.. ...... -...+++| +..++| + ++++.+.
T Consensus 267 ~~v~sv~~s~-~~~lasgs~DgtV~lWD~~~~~~~~~~~~~----H~~~V~sv~~~~s~~g~~-~laS~S~--------- 331 (524)
T 2j04_B 267 SLITTFDFLS-PTTVVCGFKNGFVAEFDLTDPEVPSFYDQV----HDSYILSVSTAYSDFEDT-VVSTVAV--------- 331 (524)
T ss_dssp TCEEEEEESS-SSEEEEEETTSEEEEEETTBCSSCSEEEEC----SSSCEEEEEEECCTTSCC-EEEEEET---------
T ss_pred CCEEEEEecC-CCeEEEEeCCCEEEEEECCCCCCceEEeec----ccccEEEEEEEcCCCCCe-EEEEecc---------
Confidence 4556788887 66666665555588889876532 111111 11245677 456777 7 6666543
Q ss_pred hhhhcCCCCceEEEEeCCCCeEE-EEec--CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCC
Q 046018 123 SSILSGDKTGRLLKYEKTTKEVT-ILLQ--GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFP 199 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~~~-~~~~--~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p 199 (310)
++.|..||..+++.. .+.. .......++++|+++ .+++....+.|..||+..... ...+..-.+..
T Consensus 332 --------D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~~~--~~~l~gH~~~V 400 (524)
T 2j04_B 332 --------DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAAFA--VHPLVSRETTI 400 (524)
T ss_dssp --------TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCTTC--CEEEEECSSCE
T ss_pred --------CCeEEEEECCCCCcccccccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECccccc--ceeeecCCCce
Confidence 788999998654321 1111 111246799999998 456656778999999874321 12232222345
Q ss_pred CeeEECCCCCEEEEEecCCc
Q 046018 200 DNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 200 ~~i~~d~~G~l~va~~~~~~ 219 (310)
..++++++|.+.++....+.
T Consensus 401 ~sva~Sp~g~~l~Sgs~Dgt 420 (524)
T 2j04_B 401 TAIGVSRLHPMVLAGSADGS 420 (524)
T ss_dssp EEEECCSSCCBCEEEETTTE
T ss_pred EEEEeCCCCCeEEEEECCCE
Confidence 78899999987777666554
No 265
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.97 E-value=0.0081 Score=53.19 Aligned_cols=140 Identities=11% Similarity=0.024 Sum_probs=81.0
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
.....+++++ +|++.++... +.|..+|.++++....... +...-.+++.+++ +.++..
T Consensus 148 ~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~------h~~~v~~~s~~~~-~l~sgs------------- 206 (420)
T 4gga_A 148 EYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTS------HSARVGSLSWNSY-ILSSGS------------- 206 (420)
T ss_dssp CCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECC------CSSCEEEEEEETT-EEEEEE-------------
T ss_pred CcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcEEEEEeC------CCCceEEEeeCCC-EEEEEe-------------
Confidence 3467899999 6665554444 4588889988875433221 1223344556677 555543
Q ss_pred hcCCCCceEEEEeCCCCeE--EEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcc--eeeeeCCCCCCe
Q 046018 126 LSGDKTGRLLKYEKTTKEV--TILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQ--DVFAELPGFPDN 201 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~--~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~p~~ 201 (310)
.++.+..+|...... ..+........++.+.++++.+ ++....+.|.+++...+..... .......+....
T Consensus 207 ----~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l-~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~ 281 (420)
T 4gga_A 207 ----RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHL-ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKA 281 (420)
T ss_dssp ----TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEE
T ss_pred ----CCCceeEeeecccceeeEEecccccceeeeeecCCCCee-eeeeccccceEEeeccccccceeeeeecccCCceee
Confidence 267788888654332 2333334456789999999854 4446778999998864322111 111111223355
Q ss_pred eEECCCC-CEEE
Q 046018 202 VRSNSNG-EFWV 212 (310)
Q Consensus 202 i~~d~~G-~l~v 212 (310)
+++.+.+ ++.+
T Consensus 282 ~~~~p~~~~~la 293 (420)
T 4gga_A 282 VAWCPWQSNVLA 293 (420)
T ss_dssp EEECTTCTTEEE
T ss_pred eeeCCCcccEEE
Confidence 6777765 4443
No 266
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.94 E-value=0.00071 Score=63.83 Aligned_cols=153 Identities=8% Similarity=-0.054 Sum_probs=90.2
Q ss_pred EEEEeCCCCC-eEEEEE----------eccccccccC------CCCCccc-cccceeceEEEeCCCCc-EEEEECC----
Q 046018 11 ILKWQGDELG-WTEFAV----------TTSQRKECVR------PFAPDIE-HICGRPLGIRFDKKTGD-LYIADAY---- 67 (310)
Q Consensus 11 i~~~~~~~~~-W~~~~~----------~~~~~~~~~~------~~~~~~~-~~~~~p~gl~~d~~~g~-l~v~~~~---- 67 (310)
-..|.++.+. .+.... ..+..++..+ .....+. ........+++++ +|+ |+++...
T Consensus 134 ~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~ 212 (662)
T 3azo_A 134 DPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRM 212 (662)
T ss_dssp EEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECT-TSSEEEEEEECTTCC
T ss_pred CcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECC-CCCEEEEEECCCCCC
Confidence 3567776664 222222 4566777655 3323333 3234566789999 664 5544422
Q ss_pred ----CceEEEeCC-CC---eEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeC
Q 046018 68 ----LGFQVVGPE-GG---LATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEK 139 (310)
Q Consensus 68 ----~gi~~~d~~-~~---~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 139 (310)
..|+.+|.+ ++ +.+.+... ....+..++++|||+ ++++.... ....|+++|.
T Consensus 213 ~~~~~~i~~~d~~~~g~~~~~~~l~~~----~~~~~~~~~~spdg~-l~~~~~~~---------------~~~~l~~~~~ 272 (662)
T 3azo_A 213 PWEGTELKTARVTEDGRFADTRTLLGG----PEEAIAQAEWAPDGS-LIVATDRT---------------GWWNLHRVDP 272 (662)
T ss_dssp TTTCEEEEEEEECTTSCEEEEEEEEEE----TTBCEEEEEECTTSC-EEEEECTT---------------SSCEEEEECT
T ss_pred CCCCcEEEEEEECCCCcccccEEeCCC----CCceEcceEECCCCe-EEEEECCC---------------CCeEEEEEEC
Confidence 248888888 46 44444322 112466789999999 77776431 1337999998
Q ss_pred CCCeEEEEecCCcc---------cceEEEecCCCeEEEEecCCceEEEEEccCC
Q 046018 140 TTKEVTILLQGLAF---------ANGVALSRDRTFILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 140 ~~~~~~~~~~~~~~---------~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~ 184 (310)
++++.+.+...... ...++++++++.++.+......|++++.+++
T Consensus 273 ~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 326 (662)
T 3azo_A 273 ATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESG 326 (662)
T ss_dssp TTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTT
T ss_pred CCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCC
Confidence 77777665432111 3468888888855554334446777776643
No 267
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.94 E-value=0.013 Score=54.48 Aligned_cols=85 Identities=12% Similarity=0.016 Sum_probs=44.1
Q ss_pred ceEEeCCCCEEEEEeCCCc-hhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCC-------cccceEEE---ecCCC-
Q 046018 97 DLDIDEHKGVIYFTDSSTS-FQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGL-------AFANGVAL---SRDRT- 164 (310)
Q Consensus 97 ~i~~d~~g~~l~v~~~~~~-~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~-------~~~~gi~~---~~d~~- 164 (310)
.+++|++...+|++..... |....... .....+.|+.+|+++|+........ ..+...++ ..||+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~g---d~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~ 315 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPG---DNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKM 315 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCS---CCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCC---CceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcE
Confidence 4678887665888764210 11100000 0001346999999999876433211 01122222 23664
Q ss_pred -eEEEEecCCceEEEEEccCC
Q 046018 165 -FILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 165 -~lyv~~~~~~~i~~~~~~~~ 184 (310)
.+++....++.|+.+|..++
T Consensus 316 ~~~v~~~~~~G~l~~lD~~tG 336 (571)
T 2ad6_A 316 TPLLSHIDRNGILYTLNRENG 336 (571)
T ss_dssp EEEEEEECTTSEEEEEETTTC
T ss_pred EEEEEEeCCCcEEEEEECCCC
Confidence 34444466788999887643
No 268
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.93 E-value=0.0017 Score=56.58 Aligned_cols=154 Identities=8% Similarity=-0.027 Sum_probs=92.5
Q ss_pred cceeceEEEeC-CCCcEEEEECCCceEEEeCCCCeEEEEEee------c---CCccccCCcceEEeC-CCCEEEEEeCCC
Q 046018 46 CGRPLGIRFDK-KTGDLYIADAYLGFQVVGPEGGLATQLVTE------A---AGQPLRFTNDLDIDE-HKGVIYFTDSST 114 (310)
Q Consensus 46 ~~~p~gl~~d~-~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~------~---~~~~~~~~~~i~~d~-~g~~l~v~~~~~ 114 (310)
......+++++ +...|..+...+.|..+|.+++........ . .......+..+++.| +++ ++++..
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~-- 119 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG-MFTSSS-- 119 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT-CEEEEE--
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc-EEEEEe--
Confidence 35667899988 444455555445588888876543211110 0 011223567889999 666 555442
Q ss_pred chhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCC--eEEEEecCCceEEEEEccCCCCCcceee
Q 046018 115 SFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRT--FILIAETSNCRILRFWLHGPNSGKQDVF 192 (310)
Q Consensus 115 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~--~lyv~~~~~~~i~~~~~~~~~~~~~~~~ 192 (310)
.++.|..||..+++.............+++.+.+. .++++...++.|.+|+...+.. ...+
T Consensus 120 ---------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~--~~~~ 182 (408)
T 4a11_B 120 ---------------FDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC--SHIL 182 (408)
T ss_dssp ---------------TTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC--CEEE
T ss_pred ---------------CCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce--eeee
Confidence 27889999998887665554444567788887432 1444456778999999874321 1222
Q ss_pred eeCCCCCCeeEECCCCC-EEEEEecCCc
Q 046018 193 AELPGFPDNVRSNSNGE-FWVALHAKKG 219 (310)
Q Consensus 193 ~~~~~~p~~i~~d~~G~-l~va~~~~~~ 219 (310)
....+....+++.++|. ++++....+.
T Consensus 183 ~~~~~~v~~~~~~~~~~~ll~~~~~dg~ 210 (408)
T 4a11_B 183 QGHRQEILAVSWSPRYDYILATASADSR 210 (408)
T ss_dssp CCCCSCEEEEEECSSCTTEEEEEETTSC
T ss_pred cCCCCcEEEEEECCCCCcEEEEEcCCCc
Confidence 22223456789999986 5655555444
No 269
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.93 E-value=0.0066 Score=50.92 Aligned_cols=111 Identities=10% Similarity=0.001 Sum_probs=68.2
Q ss_pred eeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
....+++++ +++..++....+ |..++.++++....... +.....++..+++ +.++...
T Consensus 69 ~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~------h~~~~~~~~~~~~-~l~s~~~------------- 127 (318)
T 4ggc_A 69 YISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTS------HSARVGSLSWNSY-ILSSGSR------------- 127 (318)
T ss_dssp CEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEEC------CSSCEEEEEEETT-EEEEEET-------------
T ss_pred eEEEEEECC-CCCEEEEEECCCcEEEeecCCceeEEEecC------ccceEEEeecCCC-EEEEEec-------------
Confidence 456899999 666655545444 78889998875433221 2233445666677 5544422
Q ss_pred cCCCCceEEEEeCCCCeE--EEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCC
Q 046018 127 SGDKTGRLLKYEKTTKEV--TILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~--~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~ 184 (310)
.+.+..++...+.. ..+.........+++.++++.+ ++...++.|.+||...+
T Consensus 128 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 128 ----SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHL-ASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp ----TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEESSCB
T ss_pred ----CCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEE-EEEecCcceeEEECCCC
Confidence 55666666554432 2233334446778889999854 45567789999998743
No 270
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.92 E-value=0.00084 Score=56.64 Aligned_cols=151 Identities=8% Similarity=0.056 Sum_probs=84.0
Q ss_pred ceeceEEEeCCC-CcEEEEECC-CceEEEeCCCCe-E-EEEEeecCCccccCCcceEEeCC-------------CCEEEE
Q 046018 47 GRPLGIRFDKKT-GDLYIADAY-LGFQVVGPEGGL-A-TQLVTEAAGQPLRFTNDLDIDEH-------------KGVIYF 109 (310)
Q Consensus 47 ~~p~gl~~d~~~-g~l~v~~~~-~gi~~~d~~~~~-~-~~~~~~~~~~~~~~~~~i~~d~~-------------g~~l~v 109 (310)
.....++++++. |.++++... +.|..+|.+++. . ...... .....+.++++|+ ++ +++
T Consensus 100 ~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~----h~~~v~~~~~~p~~~~~~~~~~~~~~~~-~l~ 174 (297)
T 2pm7_B 100 ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA----HAIGVNSASWAPATIEEDGEHNGTKESR-KFV 174 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC----CSSCEEEEEECCCC------------CC-EEE
T ss_pred CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec----ccCccceEeecCCcccccccCCCCCCcc-eEE
Confidence 345678888731 555544444 447777776542 1 111111 1123566777775 45 444
Q ss_pred EeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCe--E--EEEecC-CcccceEEEecCC--CeEEEEecCCceEEEEEcc
Q 046018 110 TDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKE--V--TILLQG-LAFANGVALSRDR--TFILIAETSNCRILRFWLH 182 (310)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~--~--~~~~~~-~~~~~gi~~~~d~--~~lyv~~~~~~~i~~~~~~ 182 (310)
+.. .++.|..||..++. . ...... ......++++|++ ..++++.+.++.|.+|+.+
T Consensus 175 sgs-----------------~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 175 TGG-----------------ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp EEE-----------------TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred EEc-----------------CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 432 26778888765443 2 111222 2346789999985 3466666778899999987
Q ss_pred CCCCCc-ceeee--eCCCCCCeeEECCCCCEEEEEecCCc
Q 046018 183 GPNSGK-QDVFA--ELPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 183 ~~~~~~-~~~~~--~~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
...... ...+. ..+.....++++++|++.++....+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~ 277 (297)
T 2pm7_B 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK 277 (297)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC
T ss_pred CCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc
Confidence 431111 11121 12233456889999987776655554
No 271
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.88 E-value=0.0032 Score=58.12 Aligned_cols=157 Identities=9% Similarity=0.033 Sum_probs=92.7
Q ss_pred cceeceEEEeCCCCc-EEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 46 CGRPLGIRFDKKTGD-LYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 46 ~~~p~gl~~d~~~g~-l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
...+..++++| +|. |-++...+.|..++.++ .+..+ +.....+.....+++++|||++|+++.
T Consensus 85 ~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~-~l~~l-~~~~~~~~~sv~svafSPDG~~LAsgs------------- 148 (588)
T 2j04_A 85 VCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK-MLTNL-DSKGNLSSRTYHCFEWNPIESSIVVGN------------- 148 (588)
T ss_dssp SCCEEEEEECS-SSSCEEEEETTSCEEEEETTE-EEEEC-CCSSCSTTTCEEEEEECSSSSCEEEEE-------------
T ss_pred CCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc-eeeec-cCCCccccccEEEEEEcCCCCEEEEEc-------------
Confidence 35677999999 666 44444444577788543 22221 111111122477999999999666665
Q ss_pred hhcCCCCceEEEEeCCCCe--------EEEEecCC----cccceEEEecCCCeEEEEecCCceEEEEEccCCCCCc-cee
Q 046018 125 ILSGDKTGRLLKYEKTTKE--------VTILLQGL----AFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGK-QDV 191 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~--------~~~~~~~~----~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~-~~~ 191 (310)
.+|.|..||.+++. ...+.... .....++++||+ + ++...++.|..|+.++..... ...
T Consensus 149 -----~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--L-aass~D~tVrlWd~~~~~~~~~~~t 220 (588)
T 2j04_A 149 -----EDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--L-VAALSNNSVFSMTVSASSHQPVSRM 220 (588)
T ss_dssp -----TTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--E-EEEETTCCEEEECCCSSSSCCCEEE
T ss_pred -----CCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--E-EEEeCCCeEEEEECCCCccccceee
Confidence 37889999998774 23332111 246789999998 4 444668999999988653211 111
Q ss_pred eeeC-CCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccE
Q 046018 192 FAEL-PGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKT 234 (310)
Q Consensus 192 ~~~~-~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~ 234 (310)
+... ......+++. |+..++... +. +..++..+..
T Consensus 221 L~~~h~~~V~svaFs--g~~LASa~~-~t-----IkLWd~~~~~ 256 (588)
T 2j04_A 221 IQNASRRKITDLKIV--DYKVVLTCP-GY-----VHKIDLKNYS 256 (588)
T ss_dssp EECCCSSCCCCEEEE--TTEEEEECS-SE-----EEEEETTTTE
T ss_pred ecccccCcEEEEEEE--CCEEEEEeC-Ce-----EEEEECCCCe
Confidence 2111 1345677886 455555544 33 5666544433
No 272
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.86 E-value=0.00025 Score=67.72 Aligned_cols=119 Identities=9% Similarity=0.020 Sum_probs=78.5
Q ss_pred eceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCC-chhhhhhhhhhhc
Q 046018 49 PLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSST-SFQRRQFMSSILS 127 (310)
Q Consensus 49 p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~-~~~~~~~~~~~~~ 127 (310)
+..+++.+ +|+++.....+.|+.+|..+++.+++...... .......++++|||++|.++.... .| .
T Consensus 18 ~~~~~~s~-dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~SpDg~~la~~~~~~~~~----------~ 85 (719)
T 1z68_A 18 TFFPNWIS-GQEYLHQSADNNIVLYNIETGQSYTILSNRTM-KSVNASNYGLSPDRQFVYLESDYSKLW----------R 85 (719)
T ss_dssp CCCCEESS-SSEEEEECTTSCEEEEESSSCCEEEEECHHHH-HTTTCSEEEECTTSSEEEEEEEEEECS----------S
T ss_pred CCccEECC-CCeEEEEcCCCCEEEEEcCCCcEEEEEccccc-cccceeeEEECCCCCeEEEEecCceeE----------E
Confidence 34678888 77765554444599999999887665432110 001367899999999776665210 00 0
Q ss_pred CCCCceEEEEeCCCCeE---EEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCC
Q 046018 128 GDKTGRLLKYEKTTKEV---TILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 128 ~~~~g~v~~~d~~~~~~---~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~ 184 (310)
....+.|+.||.++++. ..+. .....++++|||+.|.++. .+.|++++..++
T Consensus 86 ~s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g 140 (719)
T 1z68_A 86 YSYTATYYIYDLSNGEFVRGNELP---RPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGD 140 (719)
T ss_dssp SCEEEEEEEEETTTTEECCSSCCC---SSBCCEEECSSTTCEEEEE--TTEEEEESSTTS
T ss_pred eecceEEEEEECCCCccccceecC---cccccceECCCCCEEEEEE--CCeEEEEeCCCC
Confidence 01247899999998876 3332 3467799999999776663 579999988654
No 273
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.86 E-value=0.00046 Score=55.41 Aligned_cols=137 Identities=12% Similarity=0.032 Sum_probs=84.3
Q ss_pred eeceEEEeCCCCcEEEEECCCceEEEeCCC-------CeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQVVGPEG-------GLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQ 120 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~-------~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~ 120 (310)
....|+++| +|.||++ ....++++++.+ +..+++... ....-..+.+|++|. ||+.+
T Consensus 42 ~~~~laf~P-~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~----Gw~~F~a~~fD~~G~-LYav~--------- 105 (236)
T 1tl2_A 42 NFKFLFLSP-GGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNG----GWNQFQFLFFDPNGY-LYAVS--------- 105 (236)
T ss_dssp TCSEEEECT-TSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECS----CGGGCSEEEECTTSC-EEEEE---------
T ss_pred cceeEEECC-CccEEEE-eCCeEEEECCCCCCcccccccccEeccc----ccccceEEEECCCCC-EEEeC---------
Confidence 455899999 9999999 444599999865 222223211 222357899999999 99985
Q ss_pred hhhhhhcCCCCceEEEEeCCC-CeE------EEEec-CCcccceEEEecCCCeEEEEecCCceEEEEEcc-CCCCC---c
Q 046018 121 FMSSILSGDKTGRLLKYEKTT-KEV------TILLQ-GLAFANGVALSRDRTFILIAETSNCRILRFWLH-GPNSG---K 188 (310)
Q Consensus 121 ~~~~~~~~~~~g~v~~~d~~~-~~~------~~~~~-~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~-~~~~~---~ 188 (310)
+|.|+++++-+ +.- ..+.. +-..-.-|.++|+|. ||.+. .+++++-.+- +.... .
T Consensus 106 ----------dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~~~~~wl~~ 172 (236)
T 1tl2_A 106 ----------KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVSNQDNWLAR 172 (236)
T ss_dssp ----------TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSSTTCCHHHH
T ss_pred ----------CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCCCCcccccc
Confidence 68999998732 111 12211 223347899999997 89886 5667764322 11110 0
Q ss_pred ceeeeeCCCC--CCeeEECCCCCEEEEE
Q 046018 189 QDVFAELPGF--PDNVRSNSNGEFWVAL 214 (310)
Q Consensus 189 ~~~~~~~~~~--p~~i~~d~~G~l~va~ 214 (310)
...+.. .+. -.-+.++++|+||.+.
T Consensus 173 ~~~~g~-~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 173 ATKIGQ-GGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp CEEEES-SSGGGEEEEEECTTSCEEEEE
T ss_pred cceecc-CCcceEEEEEECCCCcEEEEe
Confidence 111110 111 1226699999999988
No 274
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.85 E-value=0.015 Score=54.09 Aligned_cols=79 Identities=13% Similarity=0.179 Sum_probs=46.1
Q ss_pred eEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccc--cCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcC
Q 046018 51 GIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPL--RFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSG 128 (310)
Q Consensus 51 gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~--~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~ 128 (310)
+++++ +++||++.....|+.+|.++++..--... ..... ......++. ++. +|++.....+
T Consensus 110 ~~~~~--~~~v~v~~~dg~l~alD~~tG~~~W~~~~-~~~~~~~~~~~~P~v~-~g~-v~vg~~~~~~------------ 172 (571)
T 2ad6_A 110 GLAYG--AGQIVKKQANGHLLALDAKTGKINWEVEV-CDPKVGSTLTQAPFVA-KDT-VLMGCSGAEL------------ 172 (571)
T ss_dssp CCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEEC-CCGGGTCBCCSCCEEE-TTE-EEEECBCGGG------------
T ss_pred ccEEE--CCEEEEEeCCCEEEEEECCCCCEEEEecC-CCCCccceeccCCEEE-CCE-EEEEecCCcc------------
Confidence 45664 57999997766799999998875311111 11100 011112222 565 8888642110
Q ss_pred CCCceEEEEeCCCCeEEE
Q 046018 129 DKTGRLLKYEKTTKEVTI 146 (310)
Q Consensus 129 ~~~g~v~~~d~~~~~~~~ 146 (310)
...+.|+.+|+++|+...
T Consensus 173 ~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 173 GVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp TCCCEEEEEETTTCCEEE
T ss_pred CCCCEEEEEECCCCcEEE
Confidence 125789999999887654
No 275
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.85 E-value=0.00058 Score=59.62 Aligned_cols=147 Identities=6% Similarity=-0.038 Sum_probs=84.9
Q ss_pred eeceEEEeC-CCCcEEEEECC------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhh
Q 046018 48 RPLGIRFDK-KTGDLYIADAY------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQ 120 (310)
Q Consensus 48 ~p~gl~~d~-~~g~l~v~~~~------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~ 120 (310)
....+++++ +++.|+++... ..|+.++.+++..+.+.. ..+...+..++++|+|++|+++....
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~~~~~~~~~~spdg~~l~~~~~~~------ 259 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE---HAEGESCTHEFWIPDGSAMAYVSYFK------ 259 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC---CCTTEEEEEEEECTTSSCEEEEEEET------
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec---cCCCccccceEECCCCCEEEEEecCC------
Confidence 344677877 34446555432 248888988776544322 11122456789999998666654210
Q ss_pred hhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEec-CCCeEEEEec---------------CCceEEEEEccCC
Q 046018 121 FMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSR-DRTFILIAET---------------SNCRILRFWLHGP 184 (310)
Q Consensus 121 ~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~-d~~~lyv~~~---------------~~~~i~~~~~~~~ 184 (310)
+...+.|+.||.++++.+.+.... ..+ ++++| |++.++.+.. ....|++++++++
T Consensus 260 -------~~~~~~l~~~d~~~g~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 260 -------GQTDRVIYKANPETLENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp -------TTCCEEEEEECTTTCCEEEEEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred -------CCccceEEEEECCCCCeEEeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 011245999999888766554221 222 88999 9995554321 3468999998754
Q ss_pred CCCcceeeeeCCC-----------CCCeeEECCCCC-EEEEEe
Q 046018 185 NSGKQDVFAELPG-----------FPDNVRSNSNGE-FWVALH 215 (310)
Q Consensus 185 ~~~~~~~~~~~~~-----------~p~~i~~d~~G~-l~va~~ 215 (310)
.. ..+..... ....++++++|+ |+++..
T Consensus 331 ~~---~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 331 SA---QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp BC---CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred ce---EEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 32 22322211 134578889996 444443
No 276
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.83 E-value=0.0029 Score=60.35 Aligned_cols=132 Identities=11% Similarity=0.052 Sum_probs=78.1
Q ss_pred eEEEeCCCCeEEEEEeecC--CccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEE
Q 046018 70 FQVVGPEGGLATQLVTEAA--GQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTIL 147 (310)
Q Consensus 70 i~~~d~~~~~~~~~~~~~~--~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 147 (310)
|++.+..++..+.+.+... ........+++++|||++|.++.... +.....|+.+|.++++....
T Consensus 100 l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~-------------G~~~~~i~v~d~~tg~~~~~ 166 (710)
T 2xdw_A 100 LYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS-------------GSDWVTIKFMKVDGAKELPD 166 (710)
T ss_dssp EEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET-------------TCSCEEEEEEETTTTEEEEE
T ss_pred EEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC-------------CCceEEEEEEECCCCCCCcc
Confidence 6888876666555544311 11111356789999999776665320 11123799999999887653
Q ss_pred ecCCcccceEEEecCCCeEEEEecCC---------------ceEEEEEccCCCCCcceeeeeC---CCCCCeeEECCCCC
Q 046018 148 LQGLAFANGVALSRDRTFILIAETSN---------------CRILRFWLHGPNSGKQDVFAEL---PGFPDNVRSNSNGE 209 (310)
Q Consensus 148 ~~~~~~~~gi~~~~d~~~lyv~~~~~---------------~~i~~~~~~~~~~~~~~~~~~~---~~~p~~i~~d~~G~ 209 (310)
........+++|+|||+.|+++.... ..|+++++.++... ...+... +....++.+++||+
T Consensus 167 ~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~-~~~v~~~~~~~~~~~~~~~SpDg~ 245 (710)
T 2xdw_A 167 VLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSE-DILCAEFPDEPKWMGGAELSDDGR 245 (710)
T ss_dssp EEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGG-CEEEECCTTCTTCEEEEEECTTSC
T ss_pred cccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCccc-ceEEeccCCCCeEEEEEEEcCCCC
Confidence 22222256799999999888765432 24999988654221 1222222 22234788999996
Q ss_pred -EEEEEe
Q 046018 210 -FWVALH 215 (310)
Q Consensus 210 -l~va~~ 215 (310)
|.++..
T Consensus 246 ~l~~~~~ 252 (710)
T 2xdw_A 246 YVLLSIR 252 (710)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 444443
No 277
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.83 E-value=0.00043 Score=59.49 Aligned_cols=119 Identities=11% Similarity=0.064 Sum_probs=78.8
Q ss_pred ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEe
Q 046018 69 GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILL 148 (310)
Q Consensus 69 gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~ 148 (310)
.|+.+|.++++.+++ .....++++|||++|+++.... ......|+.++.++++...+.
T Consensus 44 ~l~~~d~~~~~~~~l---------~~~~~~~~SpDg~~la~~~~~~-------------~~~~~~l~~~~~~~g~~~~l~ 101 (347)
T 2gop_A 44 TIVIENLKNNARRFI---------ENATMPRISPDGKKIAFMRANE-------------EKKVSEIWVADLETLSSKKIL 101 (347)
T ss_dssp EEEEEETTTCCEEEE---------ESCEEEEECTTSSEEEEEEEET-------------TTTEEEEEEEETTTTEEEEEE
T ss_pred eEEEEeCCCCceEEc---------ccCCCeEECCCCCEEEEEEecc-------------CCCcceEEEEECCCCceEEEE
Confidence 388888888776544 2456789999999777665210 002345999999888777655
Q ss_pred cCCcccceEEEecCCCeEEEEecC--------------------------CceEEEEEccCCCCCcceeeeeCCCCCCee
Q 046018 149 QGLAFANGVALSRDRTFILIAETS--------------------------NCRILRFWLHGPNSGKQDVFAELPGFPDNV 202 (310)
Q Consensus 149 ~~~~~~~gi~~~~d~~~lyv~~~~--------------------------~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i 202 (310)
.... ...++++||++.|+++... ...|++++++++.. ...+.. + ....+
T Consensus 102 ~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~--~~~l~~-~-~~~~~ 176 (347)
T 2gop_A 102 EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV--IEEFEK-P-RFSSG 176 (347)
T ss_dssp EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE--EEEEEE-E-TTCEE
T ss_pred cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE--EeeecC-C-Ccccc
Confidence 4333 7889999999988776432 35799998875421 022332 3 45678
Q ss_pred EECCCCCEEEEEe
Q 046018 203 RSNSNGEFWVALH 215 (310)
Q Consensus 203 ~~d~~G~l~va~~ 215 (310)
.++++| ++++..
T Consensus 177 ~~spdg-~~~~~~ 188 (347)
T 2gop_A 177 IWHRDK-IVVNVP 188 (347)
T ss_dssp EEETTE-EEEEEE
T ss_pred cCCCCe-EEEEEe
Confidence 888888 665543
No 278
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.81 E-value=0.0031 Score=54.69 Aligned_cols=72 Identities=10% Similarity=0.074 Sum_probs=52.8
Q ss_pred CCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCce-EEEEeCCCCeEEEEec---CCcccceEEEecCCCeEEEE
Q 046018 94 FTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGR-LLKYEKTTKEVTILLQ---GLAFANGVALSRDRTFILIA 169 (310)
Q Consensus 94 ~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~-v~~~d~~~~~~~~~~~---~~~~~~gi~~~~d~~~lyv~ 169 (310)
.+..++++|+|+ +.++.+ .++. |..||..+++...... .......++++||++.|. +
T Consensus 197 ~v~~~~~s~~g~-~l~s~s-----------------~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~-s 257 (355)
T 3vu4_A 197 PIKMVRLNRKSD-MVATCS-----------------QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLA-V 257 (355)
T ss_dssp CEEEEEECTTSS-EEEEEE-----------------TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEE-E
T ss_pred ceEEEEECCCCC-EEEEEe-----------------CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEE-E
Confidence 468899999999 555543 2777 9999998776554333 233467899999999554 4
Q ss_pred ecCCceEEEEEccCC
Q 046018 170 ETSNCRILRFWLHGP 184 (310)
Q Consensus 170 ~~~~~~i~~~~~~~~ 184 (310)
.+.++.|.+|+....
T Consensus 258 ~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 258 VSDKWTLHVFEIFND 272 (355)
T ss_dssp EETTCEEEEEESSCC
T ss_pred EECCCEEEEEEccCC
Confidence 467789999998743
No 279
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.81 E-value=0.0033 Score=61.80 Aligned_cols=158 Identities=11% Similarity=0.061 Sum_probs=98.1
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
.....+++++ +..|..+...+.|..+|.++++....... ...+..++++|++++++++.
T Consensus 59 ~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~-----~~~V~~v~~sp~g~~l~sgs--------------- 117 (902)
T 2oaj_A 59 SAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFV-----PGKITSIDTDASLDWMLIGL--------------- 117 (902)
T ss_dssp CCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEEC-----SSCEEEEECCTTCSEEEEEE---------------
T ss_pred CCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcC-----CCCEEEEEECCCCCEEEEEc---------------
Confidence 3466899988 43355555555588889988765332221 12467899999999666655
Q ss_pred cCCCCceEEEEeCCCCeEEEEec------------CCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee
Q 046018 127 SGDKTGRLLKYEKTTKEVTILLQ------------GLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE 194 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~~~~~~------------~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~ 194 (310)
.+|.|..||.++++...... .......++++|++..++++....+.| .||...+.. ...+..
T Consensus 118 ---~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~--~~~~~~ 191 (902)
T 2oaj_A 118 ---QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI--KQSFIY 191 (902)
T ss_dssp ---TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE--EEEECC
T ss_pred ---CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce--EEEEec
Confidence 37889999998876542210 112357899999754345555677888 999874311 111110
Q ss_pred C------------------CCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEe
Q 046018 195 L------------------PGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLL 236 (310)
Q Consensus 195 ~------------------~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~ 236 (310)
. ......+++.++|++.++....+. +..++ ..++.+.
T Consensus 192 ~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~-----i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 192 ELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS-----LVFWDANSGHMIM 247 (902)
T ss_dssp CBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC-----EEEEETTTCCEEE
T ss_pred ccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe-----EEEEECCCCcEEE
Confidence 0 022456899999998787776665 34443 3555543
No 280
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.79 E-value=0.018 Score=51.21 Aligned_cols=203 Identities=13% Similarity=0.047 Sum_probs=101.1
Q ss_pred EEEEEeCCCCC-eEEEEEeccccccccCCCCCcc-ccccceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeec
Q 046018 10 RILKWQGDELG-WTEFAVTTSQRKECVRPFAPDI-EHICGRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEA 87 (310)
Q Consensus 10 ~i~~~~~~~~~-W~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~ 87 (310)
.|.++..+... .++.....+..+|..+.+.... .........++++ +..|+.+...+.|..+|.++++.......
T Consensus 135 ~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~- 211 (435)
T 1p22_A 135 GVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVRVWDVNTGEMLNTLIH- 211 (435)
T ss_dssp CEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECC--SSEEEEEETTSCEEEEESSSCCEEEEECC-
T ss_pred cEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEEC--CCEEEEEcCCCeEEEEECCCCcEEEEEcC-
Confidence 35666664433 3444445555566544221111 1122344456653 34555555555588889988765433221
Q ss_pred CCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEE---EEecC-CcccceEEEecCC
Q 046018 88 AGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVT---ILLQG-LAFANGVALSRDR 163 (310)
Q Consensus 88 ~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~---~~~~~-~~~~~gi~~~~d~ 163 (310)
....+..++++ ++.++.+. .++.|..||..++... ..... ......+++ ++
T Consensus 212 ---h~~~v~~l~~~--~~~l~s~s------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~ 266 (435)
T 1p22_A 212 ---HCEAVLHLRFN--NGMMVTCS------------------KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DD 266 (435)
T ss_dssp ---CCSCEEEEECC--TTEEEEEE------------------TTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ET
T ss_pred ---CCCcEEEEEEc--CCEEEEee------------------CCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CC
Confidence 11234555554 44355444 2778999998765432 11211 222345555 66
Q ss_pred CeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCCccceeeeeecc-ccccEEeeccchh
Q 046018 164 TFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNS-WLGKTLLKLPLSF 242 (310)
Q Consensus 164 ~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~-~~g~~~~~~~~~~ 242 (310)
+.++.+ ..++.|.+||...+.. ...+.........+.+ ++++.++....+. +..++ ..++.+..+....
T Consensus 267 ~~l~s~-~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~-----i~iwd~~~~~~~~~~~~h~ 336 (435)
T 1p22_A 267 KYIVSA-SGDRTIKVWNTSTCEF--VRTLNGHKRGIACLQY--RDRLVVSGSSDNT-----IRLWDIECGACLRVLEGHE 336 (435)
T ss_dssp TEEEEE-ETTSEEEEEETTTCCE--EEEEECCSSCEEEEEE--ETTEEEEEETTSC-----EEEEETTTCCEEEEECCCS
T ss_pred CEEEEE-eCCCeEEEEECCcCcE--EEEEcCCCCcEEEEEe--CCCEEEEEeCCCe-----EEEEECCCCCEEEEEeCCc
Confidence 755544 6778999999874311 1122211122334555 4555555555554 44443 4566665554333
Q ss_pred hhhccccc
Q 046018 243 RQLHSLLV 250 (310)
Q Consensus 243 ~~~~~~~~ 250 (310)
..+.++.+
T Consensus 337 ~~v~~~~~ 344 (435)
T 1p22_A 337 ELVRCIRF 344 (435)
T ss_dssp SCEEEEEC
T ss_pred CcEEEEEe
Confidence 33334433
No 281
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.78 E-value=0.0064 Score=57.81 Aligned_cols=119 Identities=11% Similarity=0.140 Sum_probs=69.3
Q ss_pred ceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCcc--ccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhc
Q 046018 50 LGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQP--LRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILS 127 (310)
Q Consensus 50 ~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~--~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~ 127 (310)
.+++++ +++||++.....|+.+|.++++..--........ .......++. ++. +|++.....+
T Consensus 122 ~~~a~~--~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~-v~v~~~~~~~----------- 186 (677)
T 1kb0_A 122 RGVALW--KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGK-VIIGNGGAEY----------- 186 (677)
T ss_dssp CCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTE-EEECCBCTTT-----------
T ss_pred CCceEE--CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCE-EEEEeccccc-----------
Confidence 356665 5799999777679999999887532112110100 0111122222 455 8887643111
Q ss_pred CCCCceEEEEeCCCCeEEEEecCCc-c-----------------------------c---ceEEEecCCCeEEEEecCC-
Q 046018 128 GDKTGRLLKYEKTTKEVTILLQGLA-F-----------------------------A---NGVALSRDRTFILIAETSN- 173 (310)
Q Consensus 128 ~~~~g~v~~~d~~~~~~~~~~~~~~-~-----------------------------~---~gi~~~~d~~~lyv~~~~~- 173 (310)
...+.|+.+|.++|+......... . + ..++++++++.+|+.....
T Consensus 187 -~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~ 265 (677)
T 1kb0_A 187 -GVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGS 265 (677)
T ss_dssp -CCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEE
T ss_pred -CCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCc
Confidence 125789999999887654221110 0 0 2578899988888874321
Q ss_pred -----------------ceEEEEEccCC
Q 046018 174 -----------------CRILRFWLHGP 184 (310)
Q Consensus 174 -----------------~~i~~~~~~~~ 184 (310)
..|+.+|.+++
T Consensus 266 ~w~~~~~~~~~gd~~~~~sv~AlD~~TG 293 (677)
T 1kb0_A 266 PWSHKVRSPKGGDNLYLASIVALDPDTG 293 (677)
T ss_dssp SSCHHHHSTTCCCCTTTTEEEEECTTTC
T ss_pred cccCCCCCccCCCCeeeEEEEEEECCCC
Confidence 25888888754
No 282
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.76 E-value=0.00037 Score=64.20 Aligned_cols=114 Identities=11% Similarity=0.051 Sum_probs=72.8
Q ss_pred ceeceE--EEeCCCC-cEEEEECCCc-eEEEeCCCCeEEE-EEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhh
Q 046018 47 GRPLGI--RFDKKTG-DLYIADAYLG-FQVVGPEGGLATQ-LVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQF 121 (310)
Q Consensus 47 ~~p~gl--~~d~~~g-~l~v~~~~~g-i~~~d~~~~~~~~-~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~ 121 (310)
.....+ ++.+ +| .++++...++ |..+|.++++... +.... ....+..++++|+++ .+++...
T Consensus 309 ~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~---~~~~v~~v~fsp~~~-~l~s~~~-------- 375 (524)
T 2j04_B 309 SYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF---RGSNLVPVVYCPQIY-SYIYSDG-------- 375 (524)
T ss_dssp SCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC---SCCSCCCEEEETTTT-EEEEECS--------
T ss_pred ccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCccccccccc---ccCcccceEeCCCcC-eEEEeCC--------
Confidence 445566 3455 66 6766665555 7777887654311 11111 111357899999999 6666533
Q ss_pred hhhhhcCCCCceEEEEeCCCCeE-EEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccC
Q 046018 122 MSSILSGDKTGRLLKYEKTTKEV-TILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHG 183 (310)
Q Consensus 122 ~~~~~~~~~~g~v~~~d~~~~~~-~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~ 183 (310)
++.|..||..++.. ..+.........++++|+++. +++.+.++.|.+|++..
T Consensus 376 ---------d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~-l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 376 ---------ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPM-VLAGSADGSLIITNAAR 428 (524)
T ss_dssp ---------SSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCB-CEEEETTTEEECCBSCS
T ss_pred ---------CCcEEEEECcccccceeeecCCCceEEEEeCCCCCe-EEEEECCCEEEEEechH
Confidence 56788999876653 333333345689999999985 45557789999998764
No 283
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.75 E-value=0.0025 Score=54.22 Aligned_cols=153 Identities=6% Similarity=0.018 Sum_probs=84.5
Q ss_pred ceeceEEEeCCC-CcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCC-----------------CCEE
Q 046018 47 GRPLGIRFDKKT-GDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEH-----------------KGVI 107 (310)
Q Consensus 47 ~~p~gl~~d~~~-g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~-----------------g~~l 107 (310)
.....++++++. +.++++....+ |..+|.+++..........+ .....+.++++|+ ++ +
T Consensus 104 ~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 181 (316)
T 3bg1_A 104 SSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNA-HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIK-R 181 (316)
T ss_dssp SCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTS-SSSCBCCCEECCCCCC------CCSCCCCCCC-B
T ss_pred CceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecc-ccCCcceEEEccccCCccccccccccCccccc-e
Confidence 446689998832 55555555544 66677665421111111111 1123566777776 23 3
Q ss_pred EEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCC-eEEEEe--cC-CcccceEEEecCC----CeEEEEecCCceEEEE
Q 046018 108 YFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTK-EVTILL--QG-LAFANGVALSRDR----TFILIAETSNCRILRF 179 (310)
Q Consensus 108 ~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-~~~~~~--~~-~~~~~gi~~~~d~----~~lyv~~~~~~~i~~~ 179 (310)
+++. ..++.|..||..++ ..+... .. ......++++|++ + ++++.+.++.|.+|
T Consensus 182 l~sg-----------------s~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~-~las~s~D~~v~iw 243 (316)
T 3bg1_A 182 FASG-----------------GCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS-TIASCSQDGRVFIW 243 (316)
T ss_dssp EECC-----------------BTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC-EEEEEETTCEEEEE
T ss_pred EEEe-----------------cCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc-eEEEEcCCCeEEEE
Confidence 3332 23677777877543 222221 12 2235789999986 4 56666778999999
Q ss_pred EccCCCCC--cceeeeeCCCCCCeeEECCCCCEEEEEecCCc
Q 046018 180 WLHGPNSG--KQDVFAELPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 180 ~~~~~~~~--~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
+.+..... ....+.........++++++|++.++....+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 244 TCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp ECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSC
T ss_pred EccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 98642111 11222223344567899999987666655554
No 284
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.75 E-value=0.0038 Score=57.60 Aligned_cols=145 Identities=10% Similarity=0.060 Sum_probs=84.5
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCCeE--------EEE------------EeecC------CccccCCcceEE
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLA--------TQL------------VTEAA------GQPLRFTNDLDI 100 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~--------~~~------------~~~~~------~~~~~~~~~i~~ 100 (310)
.....+++++ +|+++++...++..+ |+...+. ..+ ..... ......+.++++
T Consensus 16 ~~v~sv~~Sp-DG~~iASas~D~TV~-d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vaw 93 (588)
T 2j04_A 16 DWKNNLTWAR-DGTLYLTTFPDISIG-QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKP 93 (588)
T ss_dssp SSSCCEEECT-TSCEEEECSSSEEEE-EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEE
T ss_pred ccEEEEEECC-CCCEEEEEcCCceee-cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEE
Confidence 4556788988 888888866555333 3332220 000 00000 011235678889
Q ss_pred eCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCc-----ccceEEEecCCCeEEEEecCCce
Q 046018 101 DEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLA-----FANGVALSRDRTFILIAETSNCR 175 (310)
Q Consensus 101 d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~-----~~~gi~~~~d~~~lyv~~~~~~~ 175 (310)
+|+|.+|-++. .+|.|..|+.++ ....+. ... ....++|+|||+.|+.+ ..++.
T Consensus 94 SPdG~~LAs~s------------------~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsg-s~DGt 152 (588)
T 2j04_A 94 SPIDDWMAVLS------------------NNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVG-NEDGE 152 (588)
T ss_dssp CSSSSCEEEEE------------------TTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEE-ETTSE
T ss_pred CCCCCEEEEEe------------------CCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEE-cCCCE
Confidence 99998444443 378899998653 333222 111 25689999999977776 56789
Q ss_pred EEEEEccCCCCCcc-----eeeee-CC---CCCCeeEECCCCCEEEEEe
Q 046018 176 ILRFWLHGPNSGKQ-----DVFAE-LP---GFPDNVRSNSNGEFWVALH 215 (310)
Q Consensus 176 i~~~~~~~~~~~~~-----~~~~~-~~---~~p~~i~~d~~G~l~va~~ 215 (310)
|..|+..++..... ..+.. .. .....+++.++| +.++..
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~ 200 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALS 200 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEET
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeC
Confidence 99999886533111 22211 11 244678999999 544443
No 285
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.73 E-value=0.011 Score=52.45 Aligned_cols=216 Identities=12% Similarity=0.056 Sum_probs=105.6
Q ss_pred EEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCc
Q 046018 53 RFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTG 132 (310)
Q Consensus 53 ~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g 132 (310)
++..++..|..+...+.|..+|..+++........ ...+..+++ +++.++.+. .+|
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h----~~~v~~l~~--~~~~l~sg~------------------~dg 193 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGH----TGSVLCLQY--DERVIITGS------------------SDS 193 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCC----SSCEEEEEC--CSSEEEEEE------------------TTS
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCC----CCcEEEEEE--CCCEEEEEc------------------CCC
Confidence 34442334455544455888899887654333211 113344444 677344443 378
Q ss_pred eEEEEeCCCCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcc-eeeeeCCCCCCeeEECCCCCE
Q 046018 133 RLLKYEKTTKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQ-DVFAELPGFPDNVRSNSNGEF 210 (310)
Q Consensus 133 ~v~~~d~~~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~p~~i~~d~~G~l 210 (310)
.|..||..+++....... ......++++ ++ ++++.+.++.|.+||......... ..+.........+.+ +|+.
T Consensus 194 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~ 268 (435)
T 1p22_A 194 TVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKY 268 (435)
T ss_dssp CEEEEESSSCCEEEEECCCCSCEEEEECC--TT-EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTE
T ss_pred eEEEEECCCCcEEEEEcCCCCcEEEEEEc--CC-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCE
Confidence 899999988766543322 2234566665 44 445556789999999875322111 111111122344555 5666
Q ss_pred EEEEecCCccceeeeeec-cccccEEeeccchhhhhcccccCC------CCceEEEEECC-CCCEEEEEEcCCCCeecce
Q 046018 211 WVALHAKKGLFGKLILLN-SWLGKTLLKLPLSFRQLHSLLVGG------KPHATAIKLSE-KGEVLEVLEDCEGKTLSFI 282 (310)
Q Consensus 211 ~va~~~~~~~~~~~i~~~-~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~d~-~g~~~~~~~~~~g~~~~~~ 282 (310)
.++....+. +..+ ...++.+..+........++.+.+ ..++.+..+|. .++.+..+.... ..+
T Consensus 269 l~s~~~dg~-----i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~----~~v 339 (435)
T 1p22_A 269 IVSASGDRT-----IKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE----ELV 339 (435)
T ss_dssp EEEEETTSE-----EEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCS----SCE
T ss_pred EEEEeCCCe-----EEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCc----CcE
Confidence 555555454 3333 345555554433222222222211 01111112232 234444333221 224
Q ss_pred eEEEEeCCEEEEecCCCCeEEEecc
Q 046018 283 SEVEEKDGQLWMGSVLMPFIGIYNR 307 (310)
Q Consensus 283 ~~~~~~~g~l~vgs~~~~~i~~~~~ 307 (310)
+.+...+..|..|+. +..|.+++.
T Consensus 340 ~~~~~~~~~l~sg~~-dg~i~vwd~ 363 (435)
T 1p22_A 340 RCIRFDNKRIVSGAY-DGKIKVWDL 363 (435)
T ss_dssp EEEECCSSEEEEEET-TSCEEEEEH
T ss_pred EEEEecCCEEEEEeC-CCcEEEEEC
Confidence 455455566666665 666877764
No 286
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.68 E-value=0.00057 Score=61.38 Aligned_cols=119 Identities=7% Similarity=-0.063 Sum_probs=72.6
Q ss_pred CCcceEEeCCCCEEEE---EeCCCchhhhhhhhhhhcCCCCceEEEEeCCCC-----e-------EEEEecCCcccceEE
Q 046018 94 FTNDLDIDEHKGVIYF---TDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTK-----E-------VTILLQGLAFANGVA 158 (310)
Q Consensus 94 ~~~~i~~d~~g~~l~v---~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-----~-------~~~~~~~~~~~~gi~ 158 (310)
.+.+++++++|++|++ +.. .++.|..||..++ + ...+.........++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs-----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 156 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSE-----------------YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMK 156 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETT-----------------TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEE
T ss_pred cccEEEEcCCCCEEEEEEeccC-----------------CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEE
Confidence 4788999999995554 332 2678888886432 0 111111123467899
Q ss_pred EecCCCeEEEEecCCceEEEEEccCCCCCcceeeee--CCCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEe
Q 046018 159 LSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE--LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLL 236 (310)
Q Consensus 159 ~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~ 236 (310)
|+|+...++++.+.++.|.+||...+. ..... .......++++++|+..++....+. +..++..++...
T Consensus 157 ~~p~~~~~las~s~Dg~v~iwD~~~~~----~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~-----v~iwd~~~~~~~ 227 (434)
T 2oit_A 157 WNPTVPSMVAVCLADGSIAVLQVTETV----KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGT-----VVQYLPTLQEKK 227 (434)
T ss_dssp ECSSCTTEEEEEETTSCEEEEEESSSE----EEEEEECGGGCEEEEEECTTSSCEEEEETTSC-----EEEECTTCCEEE
T ss_pred ECCCCCCEEEEEECCCeEEEEEcCCCc----ceeeccCCCCceeEEEEcCCCCEEEEEcCCCc-----EEEEccCCcccc
Confidence 999843366666788999999987431 11111 1234578999999976555555554 555554454444
Q ss_pred ec
Q 046018 237 KL 238 (310)
Q Consensus 237 ~~ 238 (310)
.+
T Consensus 228 ~~ 229 (434)
T 2oit_A 228 VI 229 (434)
T ss_dssp EE
T ss_pred cc
Confidence 33
No 287
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.68 E-value=0.036 Score=51.75 Aligned_cols=82 Identities=15% Similarity=0.129 Sum_probs=46.6
Q ss_pred ceEEEeCCCCc----EEEEECCCceEEEeCCCCeEEEEEeecCCcc-c-cCCcceEEeCCCCEEEEEeCCCchhhhhhhh
Q 046018 50 LGIRFDKKTGD----LYIADAYLGFQVVGPEGGLATQLVTEAAGQP-L-RFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 50 ~gl~~d~~~g~----l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~-~-~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~ 123 (310)
.++++.+.++. ||+++....|+.+|.++++.. ......... . .....-++. ++. +|++.....+
T Consensus 109 ~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~-W~~~~~~~~~~~~~~ssP~v~-~g~-V~vg~~g~e~------- 178 (599)
T 1w6s_A 109 RGLAYWPGDGKTPALILKTQLDGNVAALNAETGETV-WKVENSDIKVGSTLTIAPYVV-KDK-VIIGSSGAEL------- 178 (599)
T ss_dssp CCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEE-EEEECCCGGGTCBCCSCCEEE-TTE-EEECCBCGGG-------
T ss_pred cceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEE-EeecCCCCCccceeecCCEEE-CCE-EEEEeccccc-------
Confidence 35677422566 999977767999999988753 211111100 0 001111222 565 8887632111
Q ss_pred hhhcCCCCceEEEEeCCCCeEEE
Q 046018 124 SILSGDKTGRLLKYEKTTKEVTI 146 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~~ 146 (310)
...+.|+.+|.++|+..-
T Consensus 179 -----g~~g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 179 -----GVRGYLTAYDVKTGEQVW 196 (599)
T ss_dssp -----TCCCEEEEEETTTCCEEE
T ss_pred -----CCCCeEEEEECCCCcEEE
Confidence 125789999999887654
No 288
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.68 E-value=0.0008 Score=62.39 Aligned_cols=119 Identities=15% Similarity=0.197 Sum_probs=78.7
Q ss_pred ccceeceEEEeCCCCcEEEEECC----------------------CceEEEeCCCC-------eEEEEEeec--------
Q 046018 45 ICGRPLGIRFDKKTGDLYIADAY----------------------LGFQVVGPEGG-------LATQLVTEA-------- 87 (310)
Q Consensus 45 ~~~~p~gl~~d~~~g~l~v~~~~----------------------~gi~~~d~~~~-------~~~~~~~~~-------- 87 (310)
...+|.++.+++.+|+||++... +.|++++++.+ ....++...
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 44689999999878999999753 12888865432 112222110
Q ss_pred ---------CCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCC--cccce
Q 046018 88 ---------AGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGL--AFANG 156 (310)
Q Consensus 88 ---------~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~--~~~~g 156 (310)
....+..|-.|+++++|+ |||+.....-.. ..+.......++.+++.++++..+.... ...-|
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~~G~-LwI~eDg~~~~~-----~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG 535 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSNA-----GDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTG 535 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCCS-----GGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEE
T ss_pred ccccccccCCCCCccCCcceEECCCCC-EEEEecCCCccc-----ccccccccceEEEEeCCCCeEEEEEeCCCCccCcC
Confidence 011245788999999999 999986531100 0011224567889999999988876543 33569
Q ss_pred EEEecCCCeEEEE
Q 046018 157 VALSRDRTFILIA 169 (310)
Q Consensus 157 i~~~~d~~~lyv~ 169 (310)
++|+||+++||+.
T Consensus 536 ~~fspDg~tlfvn 548 (592)
T 3zwu_A 536 ISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTSSEEEEE
T ss_pred eeECCCCCEEEEE
Confidence 9999999999986
No 289
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.58 E-value=0.0092 Score=51.01 Aligned_cols=141 Identities=9% Similarity=0.047 Sum_probs=80.0
Q ss_pred eceEEEeCCCCcEEEEECC---------------------------CceEEEeCCCCeE-EEEEeecCCccccCCcceEE
Q 046018 49 PLGIRFDKKTGDLYIADAY---------------------------LGFQVVGPEGGLA-TQLVTEAAGQPLRFTNDLDI 100 (310)
Q Consensus 49 p~gl~~d~~~g~l~v~~~~---------------------------~gi~~~d~~~~~~-~~~~~~~~~~~~~~~~~i~~ 100 (310)
...++++++...|+++... ..|+.+|..+++. +.+.. + ....+++
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-----~--~~~~~~~ 178 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-----P--RFSSGIW 178 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-----E--TTCEEEE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-----C--CcccccC
Confidence 6788899833346665421 2488899988876 44422 1 4678899
Q ss_pred eCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecC-------C
Q 046018 101 DEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETS-------N 173 (310)
Q Consensus 101 d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~-------~ 173 (310)
+|+| .++++.....-. .......|+.+| +++.+.+... .. -..++|||+.|+++... .
T Consensus 179 spdg-~~~~~~~~~~~~---------~~~~~~~l~~~d--~~~~~~l~~~--~~-~~~~spdg~~l~~~~~~~~~~~~~~ 243 (347)
T 2gop_A 179 HRDK-IVVNVPHREIIP---------QYFKFWDIYIWE--DGKEEKMFEK--VS-FYAVDSDGERILLYGKPEKKYMSEH 243 (347)
T ss_dssp ETTE-EEEEEECCCSSC---------CSSCCEEEEEEE--TTEEEEEEEE--ES-EEEEEECSSCEEEEECCSSSCCCSS
T ss_pred CCCe-EEEEEecccccc---------cccccccEEEeC--CCceEEeccC--cc-eeeECCCCCEEEEEEccccCCcccc
Confidence 9999 566664321000 000134688998 5776665543 22 22349999987665432 3
Q ss_pred ceEEEEEccCCCCCcceeeee-CCCCCCe-eEECCCCCEEEEEecCC
Q 046018 174 CRILRFWLHGPNSGKQDVFAE-LPGFPDN-VRSNSNGEFWVALHAKK 218 (310)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~~~~-~~~~p~~-i~~d~~G~l~va~~~~~ 218 (310)
..|+.++ .+ ....+.. .+..... +.++ +| +++.....+
T Consensus 244 ~~l~~~d-~~----~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 244 NKLYIYD-GK----EVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp CEEEEEC-SS----CEEESSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred ceEEEEC-CC----ceEeccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 5788887 32 1222211 1222333 6777 88 766655444
No 290
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.57 E-value=0.0069 Score=57.63 Aligned_cols=144 Identities=11% Similarity=0.022 Sum_probs=82.7
Q ss_pred CCcEEEEECCC----c-eEEEeCCCCeEEEEEeecCC--ccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCC
Q 046018 58 TGDLYIADAYL----G-FQVVGPEGGLATQLVTEAAG--QPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDK 130 (310)
Q Consensus 58 ~g~l~v~~~~~----g-i~~~d~~~~~~~~~~~~~~~--~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~ 130 (310)
.+.+|...... . |++.+..++..+++.+.... .......+++++|||++|.++.+. .+..
T Consensus 79 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~-------------~G~~ 145 (695)
T 2bkl_A 79 NGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKP-------------NAAD 145 (695)
T ss_dssp TTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEE-------------TTCS
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECC-------------CCCc
Confidence 34555554322 2 78888776666656543110 011235678899999976666532 0112
Q ss_pred CceEEEEeCCCCeEEEEecCCcc--cceEEEecCCCeEEEEecC------------CceEEEEEccCCCCCcceeeeeCC
Q 046018 131 TGRLLKYEKTTKEVTILLQGLAF--ANGVALSRDRTFILIAETS------------NCRILRFWLHGPNSGKQDVFAELP 196 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~~~~~~~~--~~gi~~~~d~~~lyv~~~~------------~~~i~~~~~~~~~~~~~~~~~~~~ 196 (310)
...|+.+|.++++... ...... ..+++|+|||+.|+++... ...|++++..++... ...+...+
T Consensus 146 ~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~-~~lv~~~~ 223 (695)
T 2bkl_A 146 EAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK-DTVVHERT 223 (695)
T ss_dssp CCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-CEEEECCC
T ss_pred eEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh-ceEEEecC
Confidence 4579999999886531 111112 2689999999988776442 234999998754221 12232222
Q ss_pred C---CCCeeEECCCCC-EEEEEec
Q 046018 197 G---FPDNVRSNSNGE-FWVALHA 216 (310)
Q Consensus 197 ~---~p~~i~~d~~G~-l~va~~~ 216 (310)
. ...++.+++||+ |.++...
T Consensus 224 ~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 224 GDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp CCTTCEEEEEECTTSCCEEEEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEEeC
Confidence 2 234678999995 4444433
No 291
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.56 E-value=0.004 Score=52.97 Aligned_cols=115 Identities=11% Similarity=0.004 Sum_probs=71.7
Q ss_pred ceeceEEEeCCCCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeC--CCCEEEEEeCCCchhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDE--HKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~--~g~~l~v~~~~~~~~~~~~~~ 123 (310)
.....+++++ +|++.++....+ |..+|.+++....+... .+ -...+.++++.+ +++ ++++.+
T Consensus 14 ~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l-~g-H~~~V~~v~~~~~~~~~-~l~s~s----------- 78 (316)
T 3bg1_A 14 DMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADL-RG-HEGPVWQVAWAHPMYGN-ILASCS----------- 78 (316)
T ss_dssp CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEE-EC-CSSCEEEEEECCGGGSS-CEEEEE-----------
T ss_pred CeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEE-cC-CCccEEEEEeCCCCCCC-EEEEEE-----------
Confidence 4456789998 777666555544 77778776643222211 11 112467888865 477 555543
Q ss_pred hhhcCCCCceEEEEeCCCCeEE---EEecCCcccceEEEecC--CCeEEEEecCCceEEEEEccC
Q 046018 124 SILSGDKTGRLLKYEKTTKEVT---ILLQGLAFANGVALSRD--RTFILIAETSNCRILRFWLHG 183 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~---~~~~~~~~~~gi~~~~d--~~~lyv~~~~~~~i~~~~~~~ 183 (310)
.++.|..||..+++.+ .+.......+.++++|+ +. ++++.+..+.|.+|+...
T Consensus 79 ------~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 79 ------YDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTG 136 (316)
T ss_dssp ------TTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECS
T ss_pred ------CCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCC
Confidence 2778999998876422 22222334689999998 55 555557788999998864
No 292
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.56 E-value=0.0054 Score=54.40 Aligned_cols=114 Identities=11% Similarity=0.055 Sum_probs=70.5
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEe----CCCCEEEEEeCCCchhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDID----EHKGVIYFTDSSTSFQRRQF 121 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d----~~g~~l~v~~~~~~~~~~~~ 121 (310)
..+..+++++ ++.++++... +.|..+|.+.++......... ...+..+++. +++. ++++..
T Consensus 215 ~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~v~~~~~~~~~s~~~~-~l~s~~--------- 280 (437)
T 3gre_A 215 GAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGD---HAPITHVEVCQFYGKNSV-IVVGGS--------- 280 (437)
T ss_dssp CCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTT---CEEEEEEEECTTTCTTEE-EEEEES---------
T ss_pred CceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCC---CCceEEEEeccccCCCcc-EEEEEc---------
Confidence 4667899999 6665554444 448888998876543322111 1135566444 5676 555443
Q ss_pred hhhhhcCCCCceEEEEeCCCCeEEEEecCC---------------------------cccceEEEecCCCeEEEEecCCc
Q 046018 122 MSSILSGDKTGRLLKYEKTTKEVTILLQGL---------------------------AFANGVALSRDRTFILIAETSNC 174 (310)
Q Consensus 122 ~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~---------------------------~~~~gi~~~~d~~~lyv~~~~~~ 174 (310)
.++.|..||..+++........ .....++++ +++ ++++...++
T Consensus 281 --------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~ 350 (437)
T 3gre_A 281 --------SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATS 350 (437)
T ss_dssp --------TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGT
T ss_pred --------CCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCC
Confidence 3788999999877654432211 113457888 665 556667789
Q ss_pred eEEEEEccCC
Q 046018 175 RILRFWLHGP 184 (310)
Q Consensus 175 ~i~~~~~~~~ 184 (310)
.|..||...+
T Consensus 351 ~i~~wd~~~~ 360 (437)
T 3gre_A 351 SIVMFSLNEL 360 (437)
T ss_dssp EEEEEETTCG
T ss_pred eEEEEECCCc
Confidence 9999998753
No 293
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.52 E-value=0.0093 Score=58.63 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=68.8
Q ss_pred CCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCC
Q 046018 94 FTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSN 173 (310)
Q Consensus 94 ~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~ 173 (310)
.+..++++|+|+ +.++.. .+|.|..|+..+.+.............++|+| ++ ++++...+
T Consensus 19 ~V~~lafspdg~-~lAsgs-----------------~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~-~L~S~s~D 78 (902)
T 2oaj_A 19 KPIAAAFDFTQN-LLAIAT-----------------VTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GI-YLVVINAK 78 (902)
T ss_dssp CEEEEEEETTTT-EEEEEE-----------------TTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TT-EEEEEETT
T ss_pred CcEEEEECCCCC-EEEEEe-----------------CCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CC-EEEEEECc
Confidence 478899999999 554442 37889999988766544333333457899999 77 44455678
Q ss_pred ceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCCc
Q 046018 174 CRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKKG 219 (310)
Q Consensus 174 ~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~~ 219 (310)
+.|.+||.+.+.. ...+ ..++....++++++|++.++....+.
T Consensus 79 ~~v~lWd~~~~~~--~~~~-~~~~~V~~v~~sp~g~~l~sgs~dg~ 121 (902)
T 2oaj_A 79 DTVYVLSLYSQKV--LTTV-FVPGKITSIDTDASLDWMLIGLQNGS 121 (902)
T ss_dssp CEEEEEETTTCSE--EEEE-ECSSCEEEEECCTTCSEEEEEETTSC
T ss_pred CeEEEEECCCCcE--EEEE-cCCCCEEEEEECCCCCEEEEEcCCCc
Confidence 9999999875321 1112 12334567899999987666555554
No 294
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.47 E-value=0.013 Score=56.08 Aligned_cols=131 Identities=10% Similarity=0.042 Sum_probs=74.8
Q ss_pred eEEEeCC---CCeEEEEEeecCCccc--cCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeE
Q 046018 70 FQVVGPE---GGLATQLVTEAAGQPL--RFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEV 144 (310)
Q Consensus 70 i~~~d~~---~~~~~~~~~~~~~~~~--~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 144 (310)
|++.+.. ++..+++.+....... ....+++++|||++|.++.... +.....|+.+|.++++.
T Consensus 135 l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~-------------G~e~~~i~v~dl~tg~~ 201 (741)
T 1yr2_A 135 LLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDG-------------GSDWRTVKFVGVADGKP 201 (741)
T ss_dssp EEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEET-------------TCSEEEEEEEETTTCCE
T ss_pred EEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCC-------------CCceEEEEEEECCCCCC
Confidence 6788775 5555555443111111 1356789999999776664220 11124699999998876
Q ss_pred EEEecCCcccceEEEecCCCeEEEEecCC-------------ceEEEEEccCCCCCcceeeeeCCC---CCCeeEECCCC
Q 046018 145 TILLQGLAFANGVALSRDRTFILIAETSN-------------CRILRFWLHGPNSGKQDVFAELPG---FPDNVRSNSNG 208 (310)
Q Consensus 145 ~~~~~~~~~~~gi~~~~d~~~lyv~~~~~-------------~~i~~~~~~~~~~~~~~~~~~~~~---~p~~i~~d~~G 208 (310)
...........+++|+|| +.|+++.... ..|++++..++... ...+...+. ...++.+++||
T Consensus 202 ~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~-~~lv~~~~~~~~~~~~~~~SpDG 279 (741)
T 1yr2_A 202 LADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSA-DQPVFATPELPKRGHGASVSSDG 279 (741)
T ss_dssp EEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGG-CEEEECCTTCTTCEEEEEECTTS
T ss_pred CCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchh-CEEEeccCCCCeEEEEEEECCCC
Confidence 543211111257899999 8887765432 25888887643221 122322222 23467889999
Q ss_pred C-EEEEEe
Q 046018 209 E-FWVALH 215 (310)
Q Consensus 209 ~-l~va~~ 215 (310)
+ |.++..
T Consensus 280 ~~l~~~~~ 287 (741)
T 1yr2_A 280 RWVVITSS 287 (741)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 6 444443
No 295
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.45 E-value=0.037 Score=46.20 Aligned_cols=144 Identities=10% Similarity=0.030 Sum_probs=87.8
Q ss_pred eEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCC
Q 046018 51 GIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDK 130 (310)
Q Consensus 51 gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~ 130 (310)
-|++++ ++.|-++ ..+.|..+|.++++..+..... .....+..++++++|+ ..++.. .
T Consensus 30 ~l~WS~-~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~--~~~~~V~~v~~~~~~~-~l~sgs-----------------~ 87 (318)
T 4ggc_A 30 LVDWSS-GNVLAVA-LDNSVYLWSASSGDILQLLQME--QPGEYISSVAWIKEGN-YLAVGT-----------------S 87 (318)
T ss_dssp CEEECT-TSEEEEE-ETTEEEEEETTTCCEEEEEECC--STTCCEEEEEECTTSS-EEEEEE-----------------T
T ss_pred EEEECC-CCEEEEE-eCCEEEEEECCCCCEEEEEEec--CCCCeEEEEEECCCCC-EEEEEE-----------------C
Confidence 478887 6544443 4445888999998866554321 1223578899999999 554442 2
Q ss_pred CceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCE
Q 046018 131 TGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEF 210 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l 210 (310)
++.|..|+.++++........ ...-.++++++. ++++....+.+..++...... ....+.........+.+.++|++
T Consensus 88 Dg~v~iw~~~~~~~~~~~~~h-~~~~~~~~~~~~-~l~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 164 (318)
T 4ggc_A 88 SAEVQLWDVQQQKRLRNMTSH-SARVGSLSWNSY-ILSSGSRSGHIHHHDVRVAEH-HVATLSGHSQEVCGLRWAPDGRH 164 (318)
T ss_dssp TSEEEEEETTTTEEEEEEECC-SSCEEEEEEETT-EEEEEETTSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTTSSE
T ss_pred CCcEEEeecCCceeEEEecCc-cceEEEeecCCC-EEEEEecCCceEeeecCCCce-eEEEEcCccCceEEEEEcCCCCE
Confidence 788999999988765433322 233455666777 455556677777777653211 11111112233456778888887
Q ss_pred EEEEecCCc
Q 046018 211 WVALHAKKG 219 (310)
Q Consensus 211 ~va~~~~~~ 219 (310)
.++....+.
T Consensus 165 l~s~~~d~~ 173 (318)
T 4ggc_A 165 LASGGNDNL 173 (318)
T ss_dssp EEEEETTSC
T ss_pred EEEEecCcc
Confidence 777666554
No 296
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.40 E-value=0.098 Score=49.74 Aligned_cols=71 Identities=15% Similarity=0.153 Sum_probs=38.9
Q ss_pred eeeccccccEEeeccchhhh-------hcccccCCCCceEEEEECC-CCCEEEEEEcCCCCeecceeEEEEeCCEEEEec
Q 046018 225 ILLNSWLGKTLLKLPLSFRQ-------LHSLLVGGKPHATAIKLSE-KGEVLEVLEDCEGKTLSFISEVEEKDGQLWMGS 296 (310)
Q Consensus 225 i~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~-~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~vgs 296 (310)
...+..+|+.+.+++.+... ...+.|.+.....+.++|. +|+++..+..+.+.. ..+.+ ...+|+.||+.
T Consensus 458 ~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~-~~p~t-y~~~G~qyv~~ 535 (689)
T 1yiq_A 458 IAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVM-AAPVT-YSVDGEQYVTF 535 (689)
T ss_dssp EEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC-SCCEE-EEETTEEEEEE
T ss_pred EEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcc-cCceE-EEECCEEEEEE
Confidence 44556678877666543221 1122333344456677874 488887776654432 12211 24688989875
Q ss_pred C
Q 046018 297 V 297 (310)
Q Consensus 297 ~ 297 (310)
.
T Consensus 536 ~ 536 (689)
T 1yiq_A 536 M 536 (689)
T ss_dssp E
T ss_pred E
Confidence 4
No 297
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.38 E-value=0.014 Score=55.95 Aligned_cols=192 Identities=12% Similarity=0.031 Sum_probs=99.6
Q ss_pred ccccccccCCCCCccccccceeceEEEeCCCCcEEEEECCC--------------ceEEEeCCCCeE--EEEEeecCCcc
Q 046018 28 TSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAYL--------------GFQVVGPEGGLA--TQLVTEAAGQP 91 (310)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~~--------------gi~~~d~~~~~~--~~~~~~~~~~~ 91 (310)
.+..+|..+..............+++++++ ..|+++.... .|++.+..++.. +.+... ...+
T Consensus 190 ~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~ 267 (741)
T 1yr2_A 190 TVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT-PELP 267 (741)
T ss_dssp EEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC-TTCT
T ss_pred EEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc-CCCC
Confidence 355566655332111111111257889995 6777776432 277777766542 222221 1111
Q ss_pred ccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCC--e-EEEEecCCcccceEEEecCCCeEEE
Q 046018 92 LRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTK--E-VTILLQGLAFANGVALSRDRTFILI 168 (310)
Q Consensus 92 ~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~--~-~~~~~~~~~~~~gi~~~~d~~~lyv 168 (310)
....++.++|||++|+++.... ......|+.+|.+++ + .+.+.......... +++|++.||+
T Consensus 268 -~~~~~~~~SpDG~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~ 332 (741)
T 1yr2_A 268 -KRGHGASVSSDGRWVVITSSEG-------------TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWF 332 (741)
T ss_dssp -TCEEEEEECTTSCEEEEEEECT-------------TCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEE
T ss_pred -eEEEEEEECCCCCEEEEEEEcc-------------CCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEE
Confidence 1345788999999777765321 012457999998776 4 55554333222233 4689988887
Q ss_pred EecC---CceEEEEEccCCCCCcceeeee-CCCCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEeeccch
Q 046018 169 AETS---NCRILRFWLHGPNSGKQDVFAE-LPGFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLS 241 (310)
Q Consensus 169 ~~~~---~~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~ 241 (310)
.... +.+|++++.++.. .....+.. ......++.++ ++.|+++....+.. + +...+..++....+.++
T Consensus 333 ~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~--~-l~~~~~~g~~~~~l~~~ 404 (741)
T 1yr2_A 333 VSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKS--Q-VLAFDLDGKPAGAVSLP 404 (741)
T ss_dssp EECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEE--E-EEEEETTSCEEEECBCS
T ss_pred EECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEE--E-EEEEeCCCCceeeccCC
Confidence 6432 4579999987532 22222221 11222345555 45666665544321 1 33344455555555443
No 298
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.37 E-value=0.017 Score=54.89 Aligned_cols=169 Identities=9% Similarity=0.039 Sum_probs=92.8
Q ss_pred ceEEEeCCCCc-EEEEECCCc-------------eEEEeCCCCeE--EEEEeecCCccccCCcceEEeCCCCEEEEEeCC
Q 046018 50 LGIRFDKKTGD-LYIADAYLG-------------FQVVGPEGGLA--TQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSS 113 (310)
Q Consensus 50 ~gl~~d~~~g~-l~v~~~~~g-------------i~~~d~~~~~~--~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~ 113 (310)
.++++++ +|+ |+.+..... |++++..++.. +.+... .+. .....+++++|||++|+++...
T Consensus 171 ~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~-~~~-~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 171 ATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER-TGD-PTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp CCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC-CCC-TTCEEEEEECTTSCCEEEEEEE
T ss_pred cceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec-CCC-CEEEEEEEECCCCCEEEEEEeC
Confidence 5789999 665 555544322 88888877652 222221 111 1234578899999977766522
Q ss_pred CchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEec---CCceEEEEEccCCCCCcce
Q 046018 114 TSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAET---SNCRILRFWLHGPNSGKQD 190 (310)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~---~~~~i~~~~~~~~~~~~~~ 190 (310)
. .....|+.++..++..+.+...........+ ++++ +|+... .+.+|++++.+++......
T Consensus 248 ~--------------~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 311 (695)
T 2bkl_A 248 G--------------WSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWK 311 (695)
T ss_dssp T--------------TTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCE
T ss_pred C--------------CCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCe
Confidence 0 0144688888766666666544333334443 7888 777644 2578999998653221122
Q ss_pred eeee-CC-CCCCeeEECCCCCEEEEEecCCccceeeeeeccccccEEeeccch
Q 046018 191 VFAE-LP-GFPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPLS 241 (310)
Q Consensus 191 ~~~~-~~-~~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~ 241 (310)
.+.. .+ ....+++++ ++.|+++....+.. + +...+..|+....+.++
T Consensus 312 ~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~--~-l~~~~~~g~~~~~l~~~ 360 (695)
T 2bkl_A 312 EIVPEDSSASLLSVSIV-GGHLSLEYLKDATS--E-VRVATLKGKPVRTVQLP 360 (695)
T ss_dssp EEECCCSSCEEEEEEEE-TTEEEEEEEETTEE--E-EEEEETTCCEEEECCCS
T ss_pred EEecCCCCCeEEEEEEE-CCEEEEEEEECCEE--E-EEEEeCCCCeeEEecCC
Confidence 2221 11 122456666 56677766554421 1 33344456555555544
No 299
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.29 E-value=0.0028 Score=50.91 Aligned_cols=102 Identities=7% Similarity=-0.039 Sum_probs=65.3
Q ss_pred cCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCC-------CeEEEEec-CCcccceEEEecCCC
Q 046018 93 RFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTT-------KEVTILLQ-GLAFANGVALSRDRT 164 (310)
Q Consensus 93 ~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~-------~~~~~~~~-~~~~~~gi~~~~d~~ 164 (310)
....+++++|+|. ||... .|.|++.++.+ +..+.+-. +-..=..+.++++|.
T Consensus 41 ~~~~~laf~P~G~-LYaV~-------------------~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~ 100 (236)
T 1tl2_A 41 SNFKFLFLSPGGE-LYGVL-------------------NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY 100 (236)
T ss_dssp TTCSEEEECTTSC-EEEEE-------------------TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC
T ss_pred ccceeEEECCCcc-EEEEe-------------------CCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC
Confidence 4567999999999 99884 77899999865 22222221 112235788999997
Q ss_pred eEEEEecCCceEEEEEccCCCCCcc----eeeeeCC-CCCCeeEECCCCCEEEEEecCC
Q 046018 165 FILIAETSNCRILRFWLHGPNSGKQ----DVFAELP-GFPDNVRSNSNGEFWVALHAKK 218 (310)
Q Consensus 165 ~lyv~~~~~~~i~~~~~~~~~~~~~----~~~~~~~-~~p~~i~~d~~G~l~va~~~~~ 218 (310)
||++ +. +.|+++++-....... ..+.+-. ..-..+.++++|.||.++ .+.
T Consensus 101 -LYav-~d-G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~ 155 (236)
T 1tl2_A 101 -LYAV-SK-DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQ 155 (236)
T ss_dssp -EEEE-ET-TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTE
T ss_pred -EEEe-CC-CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCc
Confidence 8988 43 8999997632111111 1111100 122678999999999998 543
No 300
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.29 E-value=0.061 Score=51.12 Aligned_cols=170 Identities=8% Similarity=0.057 Sum_probs=90.1
Q ss_pred ceEEEeCCCCcEEEEECCC-------------ceEEEeCCCCeE--EEEEeecCCccccCCcceEEeCCCCEEEEEeCCC
Q 046018 50 LGIRFDKKTGDLYIADAYL-------------GFQVVGPEGGLA--TQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSST 114 (310)
Q Consensus 50 ~gl~~d~~~g~l~v~~~~~-------------gi~~~d~~~~~~--~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~ 114 (310)
.+++++ ++..|+++.... .|++.+..+... +.+... .........++.+++||++|+++....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA-IPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESC-SGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEec-CCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 467777 456677765541 277777655432 222221 110011235678999999887775321
Q ss_pred chhhhhhhhhhhcCCCCceEEEEeCCCC--eEEEEecCCcccceEEEecCCCeEEEEecC---CceEEEEEccCCCCCcc
Q 046018 115 SFQRRQFMSSILSGDKTGRLLKYEKTTK--EVTILLQGLAFANGVALSRDRTFILIAETS---NCRILRFWLHGPNSGKQ 189 (310)
Q Consensus 115 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~--~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~---~~~i~~~~~~~~~~~~~ 189 (310)
.....|+.+|.+++ ..+.+......... .++++++.+|+.... +.+|++++++++.....
T Consensus 256 --------------~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~ 320 (693)
T 3iuj_A 256 --------------TSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHW 320 (693)
T ss_dssp --------------SSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC
T ss_pred --------------CCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc
Confidence 12357999997665 45555433222222 267888878776433 36899999875432222
Q ss_pred eeeeeCCCCCCeeEECCCCC-EEEEEecCCccceeeeeeccccccEEeeccch
Q 046018 190 DVFAELPGFPDNVRSNSNGE-FWVALHAKKGLFGKLILLNSWLGKTLLKLPLS 241 (310)
Q Consensus 190 ~~~~~~~~~p~~i~~d~~G~-l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~~ 241 (310)
+.+... ..+.+.++++|+ |+++...++.. .+..++..+.....+.++
T Consensus 321 ~~l~~~--~~~~~~~s~~g~~lv~~~~~~g~~---~l~~~d~~g~~~~~l~~p 368 (693)
T 3iuj_A 321 RDLIPE--RQQVLTVHSGSGYLFAEYMVDATA---RVEQFDYEGKRVREVALP 368 (693)
T ss_dssp EEEECC--CSSCEEEEEETTEEEEEEEETTEE---EEEEECTTSCEEEEECCS
T ss_pred EEEecC--CCCEEEEEEECCEEEEEEEECCee---EEEEEECCCCeeEEeecC
Confidence 333221 122235566665 44444443311 145555566666655544
No 301
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.26 E-value=0.045 Score=47.96 Aligned_cols=60 Identities=8% Similarity=-0.054 Sum_probs=36.8
Q ss_pred EEEec-CCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECCCCCEEEEEecCC
Q 046018 157 VALSR-DRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNSNGEFWVALHAKK 218 (310)
Q Consensus 157 i~~~~-d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~va~~~~~ 218 (310)
..+.+ .++.+.++...++.|..||...+.. .............++++++|+++++...++
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~--~~~~~~~~~~V~svafspdG~~LA~as~~G 381 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGLIQLINTYEKDS--NSIPIQLGMPIVDFCWHQDGSHLAIATEGS 381 (393)
T ss_dssp CEECSSCTTEEEEEETTTTEEEEEETTCTTC--CEEEEECSSCEEEEEECTTSSEEEEEESSE
T ss_pred EEEccCCCCEEEEEECCCCEEEEEECCCCcE--EEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 34444 3444555666778999999875422 122222223347899999999877766655
No 302
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.25 E-value=0.012 Score=51.72 Aligned_cols=140 Identities=9% Similarity=0.002 Sum_probs=81.2
Q ss_pred EEEEEeCC----CCC-eEEEEEeccccccccCCCCCccccc-------------------cceeceEEEeCC-CCcEEEE
Q 046018 10 RILKWQGD----ELG-WTEFAVTTSQRKECVRPFAPDIEHI-------------------CGRPLGIRFDKK-TGDLYIA 64 (310)
Q Consensus 10 ~i~~~~~~----~~~-W~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~p~gl~~d~~-~g~l~v~ 64 (310)
.|..+..+ ++. |+.....+|.+.+-.+..++.+... ....+.|++++. .+.||++
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg 195 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIG 195 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEE
Confidence 45555443 333 9987777888876555444333211 123457888863 4689999
Q ss_pred ECCCceEEEeCCCCeEEEEEeecCC--cc------ccCCcceEEeCC--CCEEEEEeCCCchhhhhhhhhhhcCCCCceE
Q 046018 65 DAYLGFQVVGPEGGLATQLVTEAAG--QP------LRFTNDLDIDEH--KGVIYFTDSSTSFQRRQFMSSILSGDKTGRL 134 (310)
Q Consensus 65 ~~~~gi~~~d~~~~~~~~~~~~~~~--~~------~~~~~~i~~d~~--g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v 134 (310)
....+|++.+-.+...+.+...... .+ ...+..|+++++ +. +|++. .+.|
T Consensus 196 ~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~-l~vg~-------------------~~gl 255 (394)
T 3b7f_A 196 MSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDI-LYQQN-------------------HCGI 255 (394)
T ss_dssp EETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTE-EEEEE-------------------TTEE
T ss_pred ECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCE-EEEEc-------------------CCeE
Confidence 8776788876555555443211100 00 123567888886 55 99986 4558
Q ss_pred EEEeCCCCeEEEEecCCcc-----cceEEEec-CCCeEEEE
Q 046018 135 LKYEKTTKEVTILLQGLAF-----ANGVALSR-DRTFILIA 169 (310)
Q Consensus 135 ~~~d~~~~~~~~~~~~~~~-----~~gi~~~~-d~~~lyv~ 169 (310)
++.+-.+..++.+...+.. ...|+++| +...||++
T Consensus 256 ~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 256 YRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp EEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred EEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 8887655666654332222 23466665 34558876
No 303
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.25 E-value=0.079 Score=45.66 Aligned_cols=75 Identities=8% Similarity=0.089 Sum_probs=46.2
Q ss_pred ceeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
.....+++++ +|+++++....++..++.++.+....... .....+++.++++.+.++...
T Consensus 20 ~~V~~v~fs~-dg~~la~g~~~~~~iw~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------------- 79 (355)
T 3vu4_A 20 NPVTDYEFNQ-DQSCLILSTLKSFEIYNVHPVAHIMSQEM------RHLSKVRMLHRTNYVAFVTGV------------- 79 (355)
T ss_dssp CCCCEEEECT-TSSEEEEECSSEEEEEEETTEEEEEEEEC------SCCCEEEECTTSSEEEEECSS-------------
T ss_pred CceEEEEECC-CCCEEEEEcCCEEEEEecCCcceeeeeec------CCeEEEEEcCCCCEEEEEECC-------------
Confidence 4566899999 88877777777777778776543322111 124556777777734344322
Q ss_pred cCCCCceEEEEeCCCCeEE
Q 046018 127 SGDKTGRLLKYEKTTKEVT 145 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~~~~ 145 (310)
++.|..||..+++..
T Consensus 80 ----d~~v~iWd~~~~~~~ 94 (355)
T 3vu4_A 80 ----KEVVHIWDDVKKQDV 94 (355)
T ss_dssp ----TTEEEEEETTTTEEE
T ss_pred ----ccEEEEEECCCCcEE
Confidence 456777777666543
No 304
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.23 E-value=0.13 Score=47.92 Aligned_cols=85 Identities=14% Similarity=0.069 Sum_probs=45.9
Q ss_pred ceEEeCCCCEEEEEeCCC-chhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCc-------ccce-EEEe---cCCC
Q 046018 97 DLDIDEHKGVIYFTDSST-SFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLA-------FANG-VALS---RDRT 164 (310)
Q Consensus 97 ~i~~d~~g~~l~v~~~~~-~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~-------~~~g-i~~~---~d~~ 164 (310)
.+++|++...+|++.... -|.......+ ....+.|+.+|+++|+..-...... .++. +.++ .||+
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd---~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~ 321 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGD---NKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGK 321 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSC---CTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSC
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCC---ccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCc
Confidence 467888777688886431 1211100000 0013579999999998765332211 1122 2232 4563
Q ss_pred --eEEEEecCCceEEEEEccCC
Q 046018 165 --FILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 165 --~lyv~~~~~~~i~~~~~~~~ 184 (310)
.+++..+.++.|+.+|..++
T Consensus 322 ~~~~v~~~~~~G~l~~lD~~tG 343 (599)
T 1w6s_A 322 ARKLLTHPDRNGIVYTLDRTDG 343 (599)
T ss_dssp EEEEEEEECTTSEEEEEETTTC
T ss_pred EEEEEEEECCCcEEEEEECCCC
Confidence 35554567788888887644
No 305
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.23 E-value=0.024 Score=49.85 Aligned_cols=184 Identities=12% Similarity=0.063 Sum_probs=102.7
Q ss_pred CcEEEEEeCCC--CC--eEEEEEe----ccccccccCCCCCccccc--------------cceeceEEEeCC--CCcEEE
Q 046018 8 DGRILKWQGDE--LG--WTEFAVT----TSQRKECVRPFAPDIEHI--------------CGRPLGIRFDKK--TGDLYI 63 (310)
Q Consensus 8 ~~~i~~~~~~~--~~--W~~~~~~----~~~~~~~~~~~~~~~~~~--------------~~~p~gl~~d~~--~g~l~v 63 (310)
+..|..+..++ .+ |+..... +|.+.+-.+..++.+... ......|++++. .+.||+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 44566666554 33 9876655 677765544444333211 013446888852 578999
Q ss_pred EECCCceEEEeCCCCeEEEEEeec--C------------CccccCCcceEEeC--CCCEEEEEeCCCchhhhhhhhhhhc
Q 046018 64 ADAYLGFQVVGPEGGLATQLVTEA--A------------GQPLRFTNDLDIDE--HKGVIYFTDSSTSFQRRQFMSSILS 127 (310)
Q Consensus 64 ~~~~~gi~~~d~~~~~~~~~~~~~--~------------~~~~~~~~~i~~d~--~g~~l~v~~~~~~~~~~~~~~~~~~ 127 (310)
+....+|++.+-.+...+.+.... . .........|+++| .++ +|++..
T Consensus 134 g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~-l~vg~~--------------- 197 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKH-LYIGMS--------------- 197 (394)
T ss_dssp EEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTC-EEEEEE---------------
T ss_pred EecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCE-EEEEEC---------------
Confidence 987778998866555555442110 0 01112345788887 356 999862
Q ss_pred CCCCceEEEEeCCCCeEEEEecCC-------------cccceEEEecC-CCeEEEEecCCceEEEEEccCCCCCcceeee
Q 046018 128 GDKTGRLLKYEKTTKEVTILLQGL-------------AFANGVALSRD-RTFILIAETSNCRILRFWLHGPNSGKQDVFA 193 (310)
Q Consensus 128 ~~~~g~v~~~d~~~~~~~~~~~~~-------------~~~~gi~~~~d-~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~ 193 (310)
.+.|++.+-.+..++.+.... .....|+++|+ .+.||++. .+.|++.+-.+. ..+.+.
T Consensus 198 ---~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G~---tW~~~~ 269 (394)
T 3b7f_A 198 ---SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIYRMDRREG---VWKRIG 269 (394)
T ss_dssp ---TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEEEEETTTT---EEECGG
T ss_pred ---CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEEEeCCCCC---cceECC
Confidence 355777765545565543211 12456788875 35688864 367888764332 122221
Q ss_pred e-CCC----CCCeeEEC--CCCCEEEEEe
Q 046018 194 E-LPG----FPDNVRSN--SNGEFWVALH 215 (310)
Q Consensus 194 ~-~~~----~p~~i~~d--~~G~l~va~~ 215 (310)
. ++. ....++++ ..+.||++..
T Consensus 270 ~~l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 270 DAMPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp GGSCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred CCCCCCCccceEEEEECCCCCCEEEEEec
Confidence 1 221 11246777 4578999874
No 306
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.14 E-value=0.098 Score=49.62 Aligned_cols=83 Identities=13% Similarity=0.152 Sum_probs=52.5
Q ss_pred CceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCC--CCCCeeEECCCC
Q 046018 131 TGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELP--GFPDNVRSNSNG 208 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~G 208 (310)
.|.|..+|+.+++............+..+..+++.+|++ +.++.|+.||..+++.- -.+ ..+ ....-+.+..+|
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~l--w~~-~~~~~~~~~p~~y~~~G 531 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKL--WEA-PTGTGVVAAPSTYMVDG 531 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEE--EEE-ECSSCCCSCCEEEEETT
T ss_pred ccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCCCcee--eee-eCCCCcccCCEEEEeCC
Confidence 478999999999876433322234566677777878877 67899999998754211 111 122 122335556789
Q ss_pred CEEEEEecC
Q 046018 209 EFWVALHAK 217 (310)
Q Consensus 209 ~l~va~~~~ 217 (310)
+.|++...+
T Consensus 532 ~~~v~~~~G 540 (677)
T 1kb0_A 532 RQYVSVAVG 540 (677)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEecc
Confidence 888887554
No 307
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.11 E-value=0.044 Score=47.35 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=36.1
Q ss_pred CceEEEEeCCCCeEEEEecCC-cccc-eEEEecCCCeEEEEecCCceEEEEEc
Q 046018 131 TGRLLKYEKTTKEVTILLQGL-AFAN-GVALSRDRTFILIAETSNCRILRFWL 181 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~~~~~~-~~~~-gi~~~~d~~~lyv~~~~~~~i~~~~~ 181 (310)
++.|..||..+++......+. ..+. .++|+|||++|+ +.+.++.|.+|+.
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La-SGS~D~TIklWd~ 355 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL-AGQKDGNIFVYHY 355 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE-EECTTSCEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE-EEECCCcEEEecC
Confidence 778999999998765443332 2233 589999999554 5577899999874
No 308
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.02 E-value=0.22 Score=47.19 Aligned_cols=125 Identities=10% Similarity=0.097 Sum_probs=71.4
Q ss_pred eeceEEEeCCCCcE--EEEECCC----ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhh
Q 046018 48 RPLGIRFDKKTGDL--YIADAYL----GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQF 121 (310)
Q Consensus 48 ~p~gl~~d~~~g~l--~v~~~~~----gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~ 121 (310)
...++++++ +|+. |..+..+ .|+.+|.++++....... ......++.+ ||+.|+++.....-..
T Consensus 130 ~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~-----~~k~~~~~Ws-Dg~~l~y~~~~~~~~~--- 199 (693)
T 3iuj_A 130 ALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK-----DVKFSGISWL-GNEGFFYSSYDKPDGS--- 199 (693)
T ss_dssp EEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE-----EEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred EEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCccccC-----CceeccEEEe-CCCEEEEEEecCcccc---
Confidence 456789999 7763 3333322 288889999875433111 1113567888 8887888764310000
Q ss_pred hhhhhcCCCCceEEEEeCCCCeE--EEEecCCc----ccceEEEecCCCeEEEEecC---CceEEEEEccCC
Q 046018 122 MSSILSGDKTGRLLKYEKTTKEV--TILLQGLA----FANGVALSRDRTFILIAETS---NCRILRFWLHGP 184 (310)
Q Consensus 122 ~~~~~~~~~~g~v~~~d~~~~~~--~~~~~~~~----~~~gi~~~~d~~~lyv~~~~---~~~i~~~~~~~~ 184 (310)
..-.......|++++..++.. +.+..... .-.++.++|||++|+++... ...|+.++.+++
T Consensus 200 --~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 200 --ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp -------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred --cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 000001234588888765532 23333222 23478899999988775432 258999998653
No 309
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.02 E-value=0.22 Score=46.35 Aligned_cols=71 Identities=17% Similarity=0.177 Sum_probs=39.3
Q ss_pred eeeccccccEEeeccchhhh-------hcccccCCCCceEEEEECC-CCCEEEEEEcCCCCeecceeEEEEeCCEEEEec
Q 046018 225 ILLNSWLGKTLLKLPLSFRQ-------LHSLLVGGKPHATAIKLSE-KGEVLEVLEDCEGKTLSFISEVEEKDGQLWMGS 296 (310)
Q Consensus 225 i~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~-~g~~~~~~~~~~g~~~~~~~~~~~~~g~l~vgs 296 (310)
...+..+|+.+.+.+.+... ...+.|-+.....+.++|. +|+++-.+..+.+.. ..+. ....+|++||+.
T Consensus 469 ~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~-a~P~-~y~~~G~qYv~~ 546 (582)
T 1flg_A 469 RAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIV-SPPI-TWEQDGEQYLGV 546 (582)
T ss_dssp EEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC-SCCE-EEEETTEEEEEE
T ss_pred EEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcc-cCce-EEEECCEEEEEE
Confidence 44556678877665443211 1122333344456778885 588888877655432 2121 124788999885
Q ss_pred C
Q 046018 297 V 297 (310)
Q Consensus 297 ~ 297 (310)
.
T Consensus 547 ~ 547 (582)
T 1flg_A 547 T 547 (582)
T ss_dssp E
T ss_pred E
Confidence 4
No 310
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.01 E-value=0.14 Score=44.15 Aligned_cols=152 Identities=7% Similarity=-0.086 Sum_probs=81.2
Q ss_pred CCcEEEEECCCc-eEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEE
Q 046018 58 TGDLYIADAYLG-FQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLK 136 (310)
Q Consensus 58 ~g~l~v~~~~~g-i~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~ 136 (310)
++.++++...++ |..+|.++++........ .........++++|+|. +.++...... ...+..+..++.+..
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~-~~~v~~v~~vafSpdG~-~lvs~s~~~~-----~w~laSGs~D~tIkl 264 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHID-DSYQASVCHKAYSEMGL-LFIVLSHPCA-----KESESLRSPVFQLIV 264 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECC-C---CCCEEEEEEETTE-EEEEEC-----------------CCEEEEE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCC-CcceeeeEEEEECCCCC-EEEEeccCCC-----cceeeccCCCcEEEE
Confidence 667788766655 777799988764443321 11123456778999998 5544322100 011223445778888
Q ss_pred EeCCCCeEEEEe----cCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCC-eeEECCCCCEE
Q 046018 137 YEKTTKEVTILL----QGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPD-NVRSNSNGEFW 211 (310)
Q Consensus 137 ~d~~~~~~~~~~----~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~-~i~~d~~G~l~ 211 (310)
||+++++..... +......-+..+.++. +.++.+.++.|.+||...++. ...+..-...+. .++++|+|++.
T Consensus 265 Wd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~-~lASgS~DgTIkIWDl~tGk~--l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 265 INPKTTLSVGVMLYCLPPGQAGRFLEGDVKDH-CAAAILTSGTIAIWDLLLGQC--TALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp EETTTTEEEEEEEECCCTTCCCCEEEEEEETT-EEEEEETTSCEEEEETTTCSE--EEEECCC--CCCCEEEECSSSSEE
T ss_pred EECCCCEEEEEEEeeccCCCcceeEccccCCC-EEEEEcCCCcEEEEECCCCcE--EEEecCCCCCeEEEEEECCCCCEE
Confidence 999988754322 1111111122233344 566666788999999875421 112211111223 47899999987
Q ss_pred EEEecCCc
Q 046018 212 VALHAKKG 219 (310)
Q Consensus 212 va~~~~~~ 219 (310)
++....+.
T Consensus 342 aSGS~D~T 349 (356)
T 2w18_A 342 LAGQKDGN 349 (356)
T ss_dssp EEECTTSC
T ss_pred EEEECCCc
Confidence 77665554
No 311
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.00 E-value=0.0019 Score=59.20 Aligned_cols=65 Identities=15% Similarity=0.246 Sum_probs=52.1
Q ss_pred ccceeceEEEeCCCCcEEEEECC-------------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEe
Q 046018 45 ICGRPLGIRFDKKTGDLYIADAY-------------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTD 111 (310)
Q Consensus 45 ~~~~p~gl~~d~~~g~l~v~~~~-------------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~ 111 (310)
.+..|.+|++++ +|.||+++.. ..+++++++++++++++.. +....+++++++||+++|||+.
T Consensus 474 ~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~---P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 474 MFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG---PIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC---CTTCEEEEEEECTTSSEEEEEE
T ss_pred ccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC---CCCccccCCEECCCCCEEEEEE
Confidence 458899999999 8999995542 1589999998988877653 2234689999999999999987
Q ss_pred CC
Q 046018 112 SS 113 (310)
Q Consensus 112 ~~ 113 (310)
.+
T Consensus 550 QH 551 (592)
T 4a9v_A 550 QH 551 (592)
T ss_dssp ES
T ss_pred eC
Confidence 54
No 312
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.96 E-value=0.00073 Score=59.26 Aligned_cols=181 Identities=12% Similarity=0.075 Sum_probs=74.1
Q ss_pred CcccccCcEEEEEeCCCCC--eEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECC-CceEEEeCCCC
Q 046018 2 PYTGVADGRILKWQGDELG--WTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGG 78 (310)
Q Consensus 2 ~~~~~~~~~i~~~~~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~ 78 (310)
+|.+..++.+.+|+..... |.-.. .. .....+.. ++.+|++... +.|+.+|.+++
T Consensus 12 v~~gs~dg~v~a~d~~tG~~~W~~~~-~~--------------------~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG 69 (369)
T 2hz6_A 12 LFVSTLDGSLHAVSKRTGSIKWTLKE-DP--------------------VLQVPTHV-EEPAFLPDPNDGSLYTLGSKNN 69 (369)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEC-CC--------------------SCCCC------CCEEECTTTCCEEEC-----
T ss_pred EEEEcCCCEEEEEECCCCCEEEEecC-CC--------------------ceecceEc-CCCEEEEeCCCCEEEEEECCCC
Confidence 4666677889999976665 76211 10 00111123 4667776444 45888898776
Q ss_pred eEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCcccceEE
Q 046018 79 LATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFANGVA 158 (310)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~ 158 (310)
+....... ...... ....++..++. +|++. .++.|+.+|+++|+....... +....
T Consensus 70 ~~~w~~~~-~~~~~~-~~sp~~~~~~~-v~~g~------------------~dg~v~a~D~~tG~~~w~~~~---~~~~~ 125 (369)
T 2hz6_A 70 EGLTKLPF-TIPELV-QASPCRSSDGI-LYMGK------------------KQDIWYVIDLLTGEKQQTLSS---AFADS 125 (369)
T ss_dssp CCSEECSC-CHHHHH-TTCSCC------CCCCE------------------EEEEEEEECCC------------------
T ss_pred ceeeeeec-cCcccc-ccCceEecCCE-EEEEe------------------CCCEEEEEECCCCcEEEEecC---CCccc
Confidence 53211111 000000 01112223555 77654 267899999998876532211 12344
Q ss_pred EecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCCCCeeEECC----CCCEEEEEecCCccceeeeee-cccccc
Q 046018 159 LSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGFPDNVRSNS----NGEFWVALHAKKGLFGKLILL-NSWLGK 233 (310)
Q Consensus 159 ~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~p~~i~~d~----~G~l~va~~~~~~~~~~~i~~-~~~~g~ 233 (310)
++|+++.+|++ +.++.|+.+|.+.++.-........ ...+++. ++.+|++...+. +.. +..+|+
T Consensus 126 ~~p~~~~v~~~-~~dg~v~a~d~~tG~~~W~~~~~~~----~~~~~~~~~~~~~~v~~~~~dg~------v~a~d~~tG~ 194 (369)
T 2hz6_A 126 LSPSTSLLYLG-RTEYTITMYDTKTRELRWNATYFDY----AASLPEDDVDYKMSHFVSNGDGL------VVTVDSESGD 194 (369)
T ss_dssp -------EEEE-EEEEEEECCCSSSSSCCCEEEEEEE----CCBCCCCCTTCCCCEEEEETSCE------EEEECTTTCC
T ss_pred ccccCCEEEEE-ecCCEEEEEECCCCCEEEeEecccc----cCccccCCccccceEEEECCCCE------EEEEECCCCc
Confidence 56677778876 4567899999875422111111111 1222332 367887765443 333 344677
Q ss_pred EEeecc
Q 046018 234 TLLKLP 239 (310)
Q Consensus 234 ~~~~~~ 239 (310)
.+....
T Consensus 195 ~~W~~~ 200 (369)
T 2hz6_A 195 VLWIQN 200 (369)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 665543
No 313
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.85 E-value=0.18 Score=47.91 Aligned_cols=82 Identities=15% Similarity=0.302 Sum_probs=51.5
Q ss_pred CceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeee-eCC--CCCCeeEECCC
Q 046018 131 TGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFA-ELP--GFPDNVRSNSN 207 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~-~~~--~~p~~i~~d~~ 207 (310)
.|.|..+|+.+|+............+-.+...+..+|++ +.++.|+.||.++++ .++. .++ ....-+.+..+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~----~lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGE----KLWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCC----EEEEEECSSCCCSCCEEEEET
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCCc----cceeeeCCCCcccCceEEEEC
Confidence 478999999999876433222222333556667767766 678999999987542 1221 122 12233666678
Q ss_pred CCEEEEEecC
Q 046018 208 GEFWVALHAK 217 (310)
Q Consensus 208 G~l~va~~~~ 217 (310)
|+.||+...+
T Consensus 529 G~qyv~~~~G 538 (689)
T 1yiq_A 529 GEQYVTFMAG 538 (689)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9999987755
No 314
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.82 E-value=0.35 Score=45.73 Aligned_cols=88 Identities=11% Similarity=0.033 Sum_probs=43.2
Q ss_pred ceEEeCCCCEEEEEeCCC-chhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCC---------cccce-EEEecCCC-
Q 046018 97 DLDIDEHKGVIYFTDSST-SFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGL---------AFANG-VALSRDRT- 164 (310)
Q Consensus 97 ~i~~d~~g~~l~v~~~~~-~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~---------~~~~g-i~~~~d~~- 164 (310)
.+++|++++.+|++.... .|.........-..-..+.|+.+|+++|+........ ..|-. ..+..|++
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 478998877688886432 1211000000000001346999999999876533221 11111 11223554
Q ss_pred -eEEEEecCCceEEEEEccCC
Q 046018 165 -FILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 165 -~lyv~~~~~~~i~~~~~~~~ 184 (310)
.+++..+.++.|+.+|..++
T Consensus 314 ~~~v~~~~~~G~l~~lD~~tG 334 (668)
T 1kv9_A 314 RKVLMQAPKNGFFYVLDRTNG 334 (668)
T ss_dssp EEEEEECCTTSEEEEEETTTC
T ss_pred EEEEEEECCCCEEEEEECCCC
Confidence 12333356778888887643
No 315
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.76 E-value=0.25 Score=43.16 Aligned_cols=98 Identities=14% Similarity=0.068 Sum_probs=63.6
Q ss_pred CceEEEeCCCCeEEEEEee--cCCccccCCcceEEeC--------CCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEE
Q 046018 68 LGFQVVGPEGGLATQLVTE--AAGQPLRFTNDLDIDE--------HKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKY 137 (310)
Q Consensus 68 ~gi~~~d~~~~~~~~~~~~--~~~~~~~~~~~i~~d~--------~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~ 137 (310)
+.|..+|.+++........ ..+ -...+++|++.| +|+ +.++.+. ++.|..|
T Consensus 111 ~~v~lw~~~~~~~~~~~~~~~~~g-H~~~v~~v~~~p~~~~~~~~d~~-~las~s~-----------------D~tv~~W 171 (393)
T 4gq1_A 111 NTVRLIITKNETIITQHVLGGKSG-HHNFVNDIDIADVYSADNRLAEQ-VIASVGD-----------------DCTLIIW 171 (393)
T ss_dssp SCEEEEEEETTEEEEEEEECTTTS-CSSCEEEEEEEEEECTTCSEEEE-EEEEEET-----------------TSEEEEE
T ss_pred CcEEEEECCCCccceeeeecccCC-CCCceEEEEEccccccccCCCCC-EEEEEEC-----------------CCeEEEE
Confidence 3477777777654332111 111 123578999987 787 6666543 7789999
Q ss_pred eCCCCeEEE-EecCCcccceEEEecCCCeEEEEecCCceEEEEEccCC
Q 046018 138 EKTTKEVTI-LLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 138 d~~~~~~~~-~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~ 184 (310)
|..++.... ..........++|+|++..++++...++.|..||...+
T Consensus 172 d~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 172 RLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred ECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 976554432 33333445789999998766666678899999998743
No 316
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.66 E-value=0.22 Score=47.10 Aligned_cols=83 Identities=17% Similarity=0.201 Sum_probs=50.2
Q ss_pred CceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCC--CCCeeEECCCC
Q 046018 131 TGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPG--FPDNVRSNSNG 208 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~p~~i~~d~~G 208 (310)
.|.|+.+|+.+++............+..+...+..+|++ +.++.|+.+|.+.++. .-.+ ..+. ...-+....+|
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG~~--l~~~-~~~~~~~~~p~~~~~~G 512 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG-TAAGQMHAYSADKGEA--LWQF-EAQSGIVAAPMTFELAG 512 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCE--EEEE-ECSSCCCSCCEEEEETT
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE-CCcccchhhhhhcChh--heEe-cCCCCcccCceEEEECC
Confidence 478999999999876433222233444555567767877 6789999999874321 1111 1211 11234445678
Q ss_pred CEEEEEecC
Q 046018 209 EFWVALHAK 217 (310)
Q Consensus 209 ~l~va~~~~ 217 (310)
++|++...+
T Consensus 513 ~~yva~~~G 521 (668)
T 1kv9_A 513 RQYVAIMAG 521 (668)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 999886654
No 317
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.62 E-value=0.2 Score=44.67 Aligned_cols=115 Identities=9% Similarity=0.055 Sum_probs=70.1
Q ss_pred ceeceEEEeCCCCcEEEEECC-CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 47 GRPLGIRFDKKTGDLYIADAY-LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 47 ~~p~gl~~d~~~g~l~v~~~~-~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
..+..++++++.+.++++... +.|..+|.+++... .... + ....+.+++++|+|++|+++.
T Consensus 150 ~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~-~~~~--~-~~~~v~~v~wspdg~~lasgs-------------- 211 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV-CATL--P-STVAVTSVCWSPKGKQLAVGK-------------- 211 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE-EEEE--C-GGGCEEEEEECTTSSCEEEEE--------------
T ss_pred CceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce-eecc--C-CCCceeEEEEcCCCCEEEEEc--------------
Confidence 457789999944676665444 44888898877432 1111 1 123578899999999555554
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCC-------cccceEEEecCCCeEEEEecCC------ceEEEEEccC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGL-------AFANGVALSRDRTFILIAETSN------CRILRFWLHG 183 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~-------~~~~gi~~~~d~~~lyv~~~~~------~~i~~~~~~~ 183 (310)
.++.|..||........+.... .....+++++++.++......+ ..+..++...
T Consensus 212 ----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 212 ----QNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp ----TTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred ----CCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 3778999998733233222111 1345788888776544433333 2377887764
No 318
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.61 E-value=0.4 Score=44.55 Aligned_cols=83 Identities=10% Similarity=0.122 Sum_probs=49.4
Q ss_pred CCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeee-eCCC--CCCeeEECC
Q 046018 130 KTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFA-ELPG--FPDNVRSNS 206 (310)
Q Consensus 130 ~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~--~p~~i~~d~ 206 (310)
..|.|+.+|+.+++............+-.+...+..+|++ +.++.|+.||.++++ .++. ..+. ...-+.+..
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-~~dg~l~A~D~~tG~----~lW~~~~~~g~~a~P~~y~~ 538 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTG-TGDGYFKAFDAKSGK----ELWKFQTGSGIVSPPITWEQ 538 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEE-CTTSEEEEEETTTCC----EEEEEECSSCCCSCCEEEEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEE-CCCCcEEEEECCCCC----EEEEecCCCCcccCceEEEE
Confidence 3688999999998765422211122222233345557776 567899999987442 1221 1221 122366667
Q ss_pred CCCEEEEEecC
Q 046018 207 NGEFWVALHAK 217 (310)
Q Consensus 207 ~G~l~va~~~~ 217 (310)
+|+.||+...+
T Consensus 539 ~G~qYv~~~~G 549 (582)
T 1flg_A 539 DGEQYLGVTVG 549 (582)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEcc
Confidence 89999998776
No 319
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.45 E-value=0.04 Score=51.08 Aligned_cols=66 Identities=17% Similarity=0.284 Sum_probs=43.7
Q ss_pred cccceEEEecCCCeEEEEecC---------------------CceEEEEEccCCCCCc----ceeeee------------
Q 046018 152 AFANGVALSRDRTFILIAETS---------------------NCRILRFWLHGPNSGK----QDVFAE------------ 194 (310)
Q Consensus 152 ~~~~gi~~~~d~~~lyv~~~~---------------------~~~i~~~~~~~~~~~~----~~~~~~------------ 194 (310)
..|.++.++|..+.+|++.+. .+.|++|++++..... ...+..
T Consensus 384 ~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~ 463 (592)
T 3zwu_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred eccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccccc
Confidence 347899999855559998664 2579999876432111 111110
Q ss_pred ----------CCCCCCeeEECCCCCEEEEEecC
Q 046018 195 ----------LPGFPDNVRSNSNGEFWVALHAK 217 (310)
Q Consensus 195 ----------~~~~p~~i~~d~~G~l~va~~~~ 217 (310)
.-..||||++|+.|+|||++-.+
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~ 496 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGD 496 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCC
T ss_pred ccccccCCCCCccCCcceEECCCCCEEEEecCC
Confidence 01358999999999999998654
No 320
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.29 E-value=0.15 Score=43.51 Aligned_cols=141 Identities=9% Similarity=-0.005 Sum_probs=76.2
Q ss_pred eeceEEEeCCCCcEEEEECCCceEEEeCC-CCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhh
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQVVGPE-GGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSIL 126 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~~~d~~-~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~ 126 (310)
...++++++ ++.+|++.....+++-+-. +...+.+. .. .......++++++++ +|+...
T Consensus 164 ~~~~~~~~~-~~~~~~~g~~G~~~~S~d~gG~tW~~~~-~~---~~~~~~~~~~~~~g~-~~~~~~-------------- 223 (327)
T 2xbg_A 164 VMRNLNRSP-SGEYVAVSSRGSFYSTWEPGQTAWEPHN-RT---TSRRLHNMGFTPDGR-LWMIVN-------------- 223 (327)
T ss_dssp CEEEEEECT-TSCEEEEETTSSEEEEECTTCSSCEEEE-CC---SSSCEEEEEECTTSC-EEEEET--------------
T ss_pred ceEEEEEcC-CCcEEEEECCCcEEEEeCCCCCceeECC-CC---CCCccceeEECCCCC-EEEEeC--------------
Confidence 456788888 7888888766667776432 33444332 11 123467788999998 998762
Q ss_pred cCCCCceEEEEeCCCC-eEEEEecC-Ccc---cceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee---CCCC
Q 046018 127 SGDKTGRLLKYEKTTK-EVTILLQG-LAF---ANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE---LPGF 198 (310)
Q Consensus 127 ~~~~~g~v~~~d~~~~-~~~~~~~~-~~~---~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~ 198 (310)
.|.+++.+.+.+ ..+.+... +.. ...+++.+++. +|++.. .+.|++ ..+++.. ...... .+..
T Consensus 224 ----~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~-~~~~g~-~g~i~~-S~DgG~t--W~~~~~~~~~~~~ 294 (327)
T 2xbg_A 224 ----GGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE-VWLAGG-AGALLC-SQDGGQT--WQQDVDVKKVPSN 294 (327)
T ss_dssp ----TTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC-EEEEES-TTCEEE-ESSTTSS--CEECGGGTTSSSC
T ss_pred ----CceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE-EEEEeC-CCeEEE-eCCCCcc--cEEcCccCCCCCC
Confidence 455666543322 23322211 111 24566777666 777643 456654 3444322 222221 1222
Q ss_pred CCeeEECCCCCEEEEEecC
Q 046018 199 PDNVRSNSNGEFWVALHAK 217 (310)
Q Consensus 199 p~~i~~d~~G~l~va~~~~ 217 (310)
-..+.+++++++|++...+
T Consensus 295 ~~~v~~~~~~~~~~~G~~G 313 (327)
T 2xbg_A 295 FYKILFFSPDQGFILGQKG 313 (327)
T ss_dssp CCEEEEEETTEEEEECSTT
T ss_pred eEEEEEECCCceEEEcCCc
Confidence 3567776667777665443
No 321
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.85 E-value=0.0038 Score=54.61 Aligned_cols=102 Identities=12% Similarity=0.161 Sum_probs=38.8
Q ss_pred CceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCCC-CCeeEECCCCC
Q 046018 131 TGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPGF-PDNVRSNSNGE 209 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-p~~i~~d~~G~ 209 (310)
++.|+.||.++|+....... .......+..+++ +|++.+.++.|+.+|..+++....-.+ ..+.. ....++..++.
T Consensus 18 dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~~-~~~~~~~~sp~~~~~~~ 94 (369)
T 2hz6_A 18 DGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLPF-TIPELVQASPCRSSDGI 94 (369)
T ss_dssp TSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEECSC-CHHHHHTTCSCC-----
T ss_pred CCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeeeec-cCccccccCceEecCCE
Confidence 67899999988877643332 2222223344565 677667788999999864321100000 00000 01112224567
Q ss_pred EEEEEecCCccceeeeeeccccccEEeeccc
Q 046018 210 FWVALHAKKGLFGKLILLNSWLGKTLLKLPL 240 (310)
Q Consensus 210 l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~ 240 (310)
+|++...+. + ...+..+|+.+..+..
T Consensus 95 v~~g~~dg~-v----~a~D~~tG~~~w~~~~ 120 (369)
T 2hz6_A 95 LYMGKKQDI-W----YVIDLLTGEKQQTLSS 120 (369)
T ss_dssp CCCCEEEEE-E----EEECCC----------
T ss_pred EEEEeCCCE-E----EEEECCCCcEEEEecC
Confidence 777665443 1 3334456777665543
No 322
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=95.82 E-value=0.3 Score=42.86 Aligned_cols=152 Identities=11% Similarity=0.015 Sum_probs=83.9
Q ss_pred eeceEEEeCCCCcEEEEECCCceEEEeCCCCe---------EEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhh
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQVVGPEGGL---------ATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQR 118 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~---------~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~ 118 (310)
...-|++++ ...++++....++..++.+.-. ++..... ..+ .+..|++ +++.|+++.
T Consensus 39 ~~nlLais~-~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~--~lp--~V~~l~f--d~~~L~v~~------- 104 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEK--EIP--DVIFVCF--HGDQVLVST------- 104 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEE--ECT--TEEEEEE--ETTEEEEEE-------
T ss_pred cccEEEEcC-CCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEe--eCC--CeeEEEE--CCCEEEEEc-------
Confidence 456799998 5555555555676666432211 1110011 111 2788999 777788874
Q ss_pred hhhhhhhhcCCCCceEEEEeCCCCeE-EEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeeeCCC
Q 046018 119 RQFMSSILSGDKTGRLLKYEKTTKEV-TILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAELPG 197 (310)
Q Consensus 119 ~~~~~~~~~~~~~g~v~~~d~~~~~~-~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 197 (310)
.+.|..||..+... .....-....+.+...+. . +.++ +.++.|++++...... .... .
T Consensus 105 ------------~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p-~-~av~-~~dG~L~v~dl~~~~~---~~~~---~ 163 (388)
T 1xip_A 105 ------------RNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN-T-LVIL-NSVNDLSALDLRTKST---KQLA---Q 163 (388)
T ss_dssp ------------SSEEEEEESSSTTCEEEEEECSSCEEEEEECSS-E-EEEE-ETTSEEEEEETTTCCE---EEEE---E
T ss_pred ------------CCcEEEEEchhhhccCccceeecceeeEEecCC-C-EEEE-ECCCCEEEEEccCCcc---cccc---C
Confidence 57899998654321 111111111234433332 2 4444 5678999999874322 1121 1
Q ss_pred CCCeeEECCCCCEEEEEecCCccceeeeeeccccccE---Eeeccch
Q 046018 198 FPDNVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKT---LLKLPLS 241 (310)
Q Consensus 198 ~p~~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~---~~~~~~~ 241 (310)
....++++++| +.++...+. +.++.+.+.. ...++.|
T Consensus 164 ~Vs~v~WSpkG-~~vg~~dg~------i~~~~~~~~~~~~k~~I~~P 203 (388)
T 1xip_A 164 NVTSFDVTNSQ-LAVLLKDRS------FQSFAWRNGEMEKQFEFSLP 203 (388)
T ss_dssp SEEEEEECSSE-EEEEETTSC------EEEEEEETTEEEEEEEECCC
T ss_pred CceEEEEcCCc-eEEEEcCCc------EEEEcCCCccccccceecCC
Confidence 35689999999 666655544 5666666655 5556554
No 323
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.77 E-value=0.78 Score=38.95 Aligned_cols=142 Identities=11% Similarity=0.010 Sum_probs=76.1
Q ss_pred eeceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhc
Q 046018 48 RPLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILS 127 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~ 127 (310)
.+..|+..+ ++++|++....+|++-.=.+...+.+... .......++++++++ +|+...
T Consensus 123 ~~~~i~~~~-~~~~~~~~~~g~v~~S~DgG~tW~~~~~~----~~~~~~~~~~~~~~~-~~~~g~--------------- 181 (327)
T 2xbg_A 123 SPRLIKALG-NGSAEMITNVGAIYRTKDSGKNWQALVQE----AIGVMRNLNRSPSGE-YVAVSS--------------- 181 (327)
T ss_dssp CEEEEEEEE-TTEEEEEETTCCEEEESSTTSSEEEEECS----CCCCEEEEEECTTSC-EEEEET---------------
T ss_pred CeEEEEEEC-CCCEEEEeCCccEEEEcCCCCCCEEeecC----CCcceEEEEEcCCCc-EEEEEC---------------
Confidence 455677666 67888887655566643223344433221 112456788888888 776652
Q ss_pred CCCCceEEEEeCC-CCeEEEEecC-CcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeee-e-CCC--CCCe
Q 046018 128 GDKTGRLLKYEKT-TKEVTILLQG-LAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFA-E-LPG--FPDN 201 (310)
Q Consensus 128 ~~~~g~v~~~d~~-~~~~~~~~~~-~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~-~-~~~--~p~~ 201 (310)
.|.+++-+-. ....+.+... ......++++++++ +|++. ..+.+++.+.+++. ....+. . ++. ....
T Consensus 182 ---~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~-~~~~~-~~G~~~~s~~D~G~--tW~~~~~~~~~~~~~~~~ 254 (327)
T 2xbg_A 182 ---RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR-LWMIV-NGGKIAFSDPDNSE--NWGELLSPLRRNSVGFLD 254 (327)
T ss_dssp ---TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC-EEEEE-TTTEEEEEETTEEE--EECCCBCTTSSCCSCEEE
T ss_pred ---CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC-EEEEe-CCceEEEecCCCCC--eeEeccCCcccCCcceEE
Confidence 4566665422 2344443221 22345788888887 77663 34666665434221 011111 0 111 1234
Q ss_pred eEECCCCCEEEEEecC
Q 046018 202 VRSNSNGEFWVALHAK 217 (310)
Q Consensus 202 i~~d~~G~l~va~~~~ 217 (310)
+++++++.+|++...+
T Consensus 255 v~~~~~~~~~~~g~~g 270 (327)
T 2xbg_A 255 LAYRTPNEVWLAGGAG 270 (327)
T ss_dssp EEESSSSCEEEEESTT
T ss_pred EEecCCCEEEEEeCCC
Confidence 6677788888886543
No 324
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.75 E-value=0.066 Score=48.95 Aligned_cols=88 Identities=13% Similarity=0.105 Sum_probs=62.8
Q ss_pred eEEEEeCCC-----CeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccC------CCC-Ccce-eeee--CCC
Q 046018 133 RLLKYEKTT-----KEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHG------PNS-GKQD-VFAE--LPG 197 (310)
Q Consensus 133 ~v~~~d~~~-----~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~------~~~-~~~~-~~~~--~~~ 197 (310)
.|-.+|... ..+....+....|+|+-++|||++++++.-.+..+.+|+.+. .+. .... +.++ +.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 466777654 134444556778999999999999999999999999999862 111 1111 2222 334
Q ss_pred CCCeeEECCCCCEEEEEecCCcc
Q 046018 198 FPDNVRSNSNGEFWVALHAKKGL 220 (310)
Q Consensus 198 ~p~~i~~d~~G~l~va~~~~~~~ 220 (310)
.|-..++|++|+.|.+.+-..++
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEE
T ss_pred cccEEEECCCCceEeeeeecceE
Confidence 68889999999999998877763
No 325
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.88 E-value=0.43 Score=44.90 Aligned_cols=116 Identities=11% Similarity=0.123 Sum_probs=73.1
Q ss_pred eeceEEEeCCCCcEEEEECC------------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCc
Q 046018 48 RPLGIRFDKKTGDLYIADAY------------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTS 115 (310)
Q Consensus 48 ~p~gl~~d~~~g~l~v~~~~------------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~ 115 (310)
.++..++.+.+|+||+.... ..+.++|+.+++.+.+...+. .......++++..+|+ ||+..-.
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~-~~~~~~~~~~~~~~g~-lyv~GG~-- 262 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVT-KHDMFCPGISMDGNGQ-IVVTGGN-- 262 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEEC-SCCCSSCEEEECTTSC-EEEECSS--
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCC-CCCCccccccCCCCCC-EEEeCCC--
Confidence 45567776546889987421 127788999887654433211 1112334577788999 9987622
Q ss_pred hhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCccc---ceEEEecCCCeEEEEec-CC-----ceEEEEEccC
Q 046018 116 FQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFA---NGVALSRDRTFILIAET-SN-----CRILRFWLHG 183 (310)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~---~gi~~~~d~~~lyv~~~-~~-----~~i~~~~~~~ 183 (310)
....+++||+.+.+++.+.. +..+ ...++.+|++ +|+..- .+ ..+++||+..
T Consensus 263 --------------~~~~v~~yd~~t~~W~~~~~-~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 263 --------------DAKKTSLYDSSSDSWIPGPD-MQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp --------------STTCEEEEEGGGTEEEECCC-CSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTT
T ss_pred --------------CCCceEEecCcCCceeECCC-CCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCC
Confidence 23469999999888876542 2222 3566667887 777543 22 5789999864
No 326
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.82 E-value=0.58 Score=44.87 Aligned_cols=105 Identities=9% Similarity=0.137 Sum_probs=60.9
Q ss_pred CcceEEe-CCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCC-eEEEEecCCc-ccceEEEecCCCeEEEEec
Q 046018 95 TNDLDID-EHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTK-EVTILLQGLA-FANGVALSRDRTFILIAET 171 (310)
Q Consensus 95 ~~~i~~d-~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~-~~~~~~~~~~-~~~gi~~~~d~~~lyv~~~ 171 (310)
....+++ |||++|.++.... +.....|+.+|.+++ +.. ..... ...+++|+||++.|+++..
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~-------------G~~~~~l~v~dl~~g~~~l--~~~~~~~~~~~~WspDg~~l~y~~~ 240 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMS-------------GNEVYTIEFKRISDPSQTI--ADKVSGTNGEIVWGPDHTSLFYVTK 240 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESS-------------SSSCEEEEEEETTCTTCCC--CCCEEEECSCCEECSSTTEEEEEEE
T ss_pred EeeeEecCCCCCEEEEEEeCC-------------CCceEEEEEEECCCCCEeC--CccccCceeeEEEecCCCEEEEEEE
Confidence 4568899 9999777665321 112345999999887 521 11111 1357899999988877644
Q ss_pred CC----ceEEEEEccCCCCCcceeeee-CCCCCCeeEECCCCC-EEEEE
Q 046018 172 SN----CRILRFWLHGPNSGKQDVFAE-LPGFPDNVRSNSNGE-FWVAL 214 (310)
Q Consensus 172 ~~----~~i~~~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~G~-l~va~ 214 (310)
.. ..|+++++.++......++.. ....-.++.+++||+ |.+..
T Consensus 241 d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 241 DETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp CTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred CCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 21 478888876542211122222 112223567889996 44444
No 327
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.27 E-value=2.6 Score=40.33 Aligned_cols=116 Identities=5% Similarity=0.041 Sum_probs=69.1
Q ss_pred eceEEEe-CCCCc-EEEEECCC-----ceEEEeCCCC-eEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhh
Q 046018 49 PLGIRFD-KKTGD-LYIADAYL-----GFQVVGPEGG-LATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQ 120 (310)
Q Consensus 49 p~gl~~d-~~~g~-l~v~~~~~-----gi~~~d~~~~-~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~ 120 (310)
..+.+++ + +|+ |.++.... .|+++|.+++ +. +... ... ...+++.+|||+.|+++.....
T Consensus 176 ~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~~---~~~-~~~~~~WspDg~~l~y~~~d~~----- 243 (751)
T 2xe4_A 176 VMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IADK---VSG-TNGEIVWGPDHTSLFYVTKDET----- 243 (751)
T ss_dssp EEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCCC---EEE-ECSCCEECSSTTEEEEEEECTT-----
T ss_pred EeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCcc---ccC-ceeeEEEecCCCEEEEEEECCC-----
Confidence 4567899 8 665 43333321 2888999887 52 1110 011 2357899999987887753210
Q ss_pred hhhhhhcCCCCceEEEEeCCCCeE--EEEe--cCCcccceEEEecCCCeEEEEec--CCceEEEEEccCC
Q 046018 121 FMSSILSGDKTGRLLKYEKTTKEV--TILL--QGLAFANGVALSRDRTFILIAET--SNCRILRFWLHGP 184 (310)
Q Consensus 121 ~~~~~~~~~~~g~v~~~d~~~~~~--~~~~--~~~~~~~gi~~~~d~~~lyv~~~--~~~~i~~~~~~~~ 184 (310)
.....|++++..++.. +.+. .....-.++.++|||+.|+++.. ....|+.++.+++
T Consensus 244 --------~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 244 --------LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp --------CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred --------CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 0124688898876532 2222 11223356789999998877543 3458899988753
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.03 E-value=2.6 Score=36.11 Aligned_cols=106 Identities=11% Similarity=0.095 Sum_probs=55.1
Q ss_pred CCcEEEEECCCceEEEeCCCCeEEEEEeecC--CccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEE
Q 046018 58 TGDLYIADAYLGFQVVGPEGGLATQLVTEAA--GQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLL 135 (310)
Q Consensus 58 ~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~--~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~ 135 (310)
++.|||++..+.|+.+|.++|+.. ...... .+... ...-+...++. +|+.... .+|.|+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~-W~~~~~~~~p~~~-~~~~~~~~~~~-~~vv~p~----------------~dG~l~ 70 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHII-WSIEPENFQPLIE-IQEPSRLETYE-TLIIEPF----------------GDGNIY 70 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEE-EEECGGGSCCSEE-CCCSCTTTSSE-EEEECCS----------------TTTEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEE-EEecCCccCCcEE-ecCCccccCCc-EEEEEEC----------------CCCEEE
Confidence 457888888777888888888743 211111 01110 00000012444 7766421 388999
Q ss_pred EEeCCCCeEEEEe--cCCcccceEE------E------ecCCCeEEEEecCCceEEEEEccCC
Q 046018 136 KYEKTTKEVTILL--QGLAFANGVA------L------SRDRTFILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 136 ~~d~~~~~~~~~~--~~~~~~~gi~------~------~~d~~~lyv~~~~~~~i~~~~~~~~ 184 (310)
.++.++|..+.-. ..+.....+. + +.+ ..+|+. +.+++++.+|...+
T Consensus 71 a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~-g~Vy~G-s~~g~l~ald~~tG 131 (339)
T 2be1_A 71 YFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVED-EKVYTG-SMRTIMYTINMLNG 131 (339)
T ss_dssp EEETTTEEEEEEEEHHHHHTTCSEEEECC----------CC-EEEEEC-EEEEEEEEEETTTC
T ss_pred EEECCCCcEEeeeccccceeccccccCCCceeecccccccC-CEEEEE-ecCCEEEEEECCCC
Confidence 9998877444211 1111111111 1 123 346765 67789999998754
No 329
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.66 E-value=2.6 Score=34.88 Aligned_cols=141 Identities=13% Similarity=0.036 Sum_probs=73.5
Q ss_pred eEEEeCCCCcEEEEECC------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhh
Q 046018 51 GIRFDKKTGDLYIADAY------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 51 gl~~d~~~g~l~v~~~~------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~ 124 (310)
+++.. +++||+.... ..+.++|+.+.+.+.+...+. .....-++.-+++ ||+..-....
T Consensus 103 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~----~r~~~~~~~~~~~-iyv~GG~~~~-------- 167 (302)
T 2xn4_A 103 GAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNT----RRSSVGVGVVGGL-LYAVGGYDVA-------- 167 (302)
T ss_dssp EEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSS----CCBSCEEEEETTE-EEEECCEETT--------
T ss_pred EEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCC----cccCceEEEECCE-EEEEeCCCCC--------
Confidence 44443 5788887542 138889999988766533211 1122223334666 8887521000
Q ss_pred hhcCCCCceEEEEeCCCCeEEEEecCCcc--cceEEEecCCCeEEEEecC-----CceEEEEEccCCCCCcceeeeeCC-
Q 046018 125 ILSGDKTGRLLKYEKTTKEVTILLQGLAF--ANGVALSRDRTFILIAETS-----NCRILRFWLHGPNSGKQDVFAELP- 196 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~~--~~gi~~~~d~~~lyv~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~- 196 (310)
.......+++||+++.+.+.+...... ...++.. +++ ||+..-. .+.+++||+... ....+...+
T Consensus 168 --~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~~~ 240 (302)
T 2xn4_A 168 --SRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNL-LYAVGGHDGPLVRKSVEVYDPTTN---AWRQVADMNM 240 (302)
T ss_dssp --TTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE-EEEECCBSSSSBCCCEEEEETTTT---EEEEECCCSS
T ss_pred --CCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCE-EEEECCCCCCcccceEEEEeCCCC---CEeeCCCCCC
Confidence 000134699999999988876432111 1233333 444 7776422 357999998643 233333322
Q ss_pred -CCCCeeEECCCCCEEEEE
Q 046018 197 -GFPDNVRSNSNGEFWVAL 214 (310)
Q Consensus 197 -~~p~~i~~d~~G~l~va~ 214 (310)
..-..++. -+|.||+..
T Consensus 241 ~r~~~~~~~-~~~~i~v~G 258 (302)
T 2xn4_A 241 CRRNAGVCA-VNGLLYVVG 258 (302)
T ss_dssp CCBSCEEEE-ETTEEEEEC
T ss_pred ccccCeEEE-ECCEEEEEC
Confidence 11123333 256777754
No 330
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.39 E-value=2.9 Score=34.55 Aligned_cols=106 Identities=14% Similarity=0.111 Sum_probs=62.1
Q ss_pred CCcEEEEECC------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCC
Q 046018 58 TGDLYIADAY------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKT 131 (310)
Q Consensus 58 ~g~l~v~~~~------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~ 131 (310)
+++||+.... ..+.++|+.+.+.+.+...+.. ....-++.-+++ ||+..-... ....
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~~~~~-iyv~GG~~~------------~~~~ 174 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA----REGAGLVVASGV-IYCLGGYDG------------LNIL 174 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC----CBSCEEEEETTE-EEEECCBCS------------SCBC
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC----cccceEEEECCE-EEEECCCCC------------Cccc
Confidence 5789988642 2388999999887766443211 122223333666 888752110 0124
Q ss_pred ceEEEEeCCCCeEEEEecCCccc---ceEEEecCCCeEEEEecC-----CceEEEEEccC
Q 046018 132 GRLLKYEKTTKEVTILLQGLAFA---NGVALSRDRTFILIAETS-----NCRILRFWLHG 183 (310)
Q Consensus 132 g~v~~~d~~~~~~~~~~~~~~~~---~gi~~~~d~~~lyv~~~~-----~~~i~~~~~~~ 183 (310)
..+++||+++.+.+.+.. .+.+ ..++.. ++ .||+..-. .+.+++||+..
T Consensus 175 ~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 175 NSVEKYDPHTGHWTNVTP-MATKRSGAGVALL-ND-HIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp CCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-TT-EEEEECCBCSSSBCCCEEEEETTT
T ss_pred ceEEEEeCCCCcEEeCCC-CCcccccceEEEE-CC-EEEEEeCCCCCcccceEEEEeCCC
Confidence 569999999998887642 2222 233333 44 47776432 35799999864
No 331
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.29 E-value=3.6 Score=37.76 Aligned_cols=106 Identities=5% Similarity=-0.023 Sum_probs=67.2
Q ss_pred cCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCC------CeE-------EEEecCCcccceEEE
Q 046018 93 RFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTT------KEV-------TILLQGLAFANGVAL 159 (310)
Q Consensus 93 ~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~------~~~-------~~~~~~~~~~~gi~~ 159 (310)
.+|.++-++|||++++++.-. +..+..++.+. ++. ....+....|-..+|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKL-----------------sptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~F 385 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKL-----------------SPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTF 385 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTT-----------------SSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEE
T ss_pred CCCcceeeCCCCCEEEEcCCC-----------------CCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEE
Confidence 479999999999977777632 44555555431 011 111223456888999
Q ss_pred ecCCCeEEEEecCCceEEEEEccC-------CCCCcceeee--eCCCCCCee------EECCCCCEEEEEecCC
Q 046018 160 SRDRTFILIAETSNCRILRFWLHG-------PNSGKQDVFA--ELPGFPDNV------RSNSNGEFWVALHAKK 218 (310)
Q Consensus 160 ~~d~~~lyv~~~~~~~i~~~~~~~-------~~~~~~~~~~--~~~~~p~~i------~~d~~G~l~va~~~~~ 218 (310)
+++| ..|.+..-+.+|.+|+++. .+.. .++. +....|.-+ ..+++|...++.+...
T Consensus 386 d~~G-~aYTtlfidSqvvkWni~~a~~~~~g~~~~--~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~s 456 (638)
T 3sbq_A 386 DGRG-NAYTTLFIDSQVVKWNMEEAVRAYKGEKVN--YIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFS 456 (638)
T ss_dssp CSSS-EEEEEETTTTEEEEEEHHHHHHHHTTCCCC--CEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCC
T ss_pred CCCC-ceEeeeeecceEEEEeccHHHHHhcCccCC--eeeeccccccCCcccccCCCccCCCCccEEEEecccc
Confidence 9998 5999988889999999863 1111 1221 122233333 4589999888877543
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.46 E-value=4.1 Score=33.92 Aligned_cols=170 Identities=8% Similarity=-0.001 Sum_probs=86.9
Q ss_pred cEEEEEeCCCCCeEEEEEeccccccccCCCCCccccccceeceEEEeCCCCcEEEEECC--------C----ceEEEeCC
Q 046018 9 GRILKWQGDELGWTEFAVTTSQRKECVRPFAPDIEHICGRPLGIRFDKKTGDLYIADAY--------L----GFQVVGPE 76 (310)
Q Consensus 9 ~~i~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~p~gl~~d~~~g~l~v~~~~--------~----gi~~~d~~ 76 (310)
..+..+++..+.|.. .. +. . .....-+.++. - ++.||+.... . .++++|+.
T Consensus 13 ~~~~~yd~~~~~W~~--~~-~~-----~-------p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~ 75 (315)
T 4asc_A 13 EGAVAYDPAANECYC--AS-LS-----S-------QVPKNHVSLVT-K-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL 75 (315)
T ss_dssp TEEEEEETTTTEEEE--EE-CC-----C-------CSCSSEEEEEC-T-TCCEEEEEEEEECSSCSSSCEEEEEEEEETT
T ss_pred CceEEECCCCCeEec--CC-CC-----C-------CCCccceEEEE-E-CCEEEEEcCcccCCCCCccccccceEEecCC
Confidence 578888998777873 11 00 0 00011223333 3 6788876541 1 17889999
Q ss_pred CCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCccc--
Q 046018 77 GGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLAFA-- 154 (310)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~-- 154 (310)
+.+.+.+...+.. ..-..++. -+++ ||+..-..... .......+++||+.+.+.+.+.. .+.+
T Consensus 76 ~~~W~~~~~~p~~---r~~~~~~~-~~~~-lyv~GG~~~~~---------~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~ 140 (315)
T 4asc_A 76 DSEWLGMPPLPSP---RCLFGLGE-ALNS-IYVVGGREIKD---------GERCLDSVMCYDRLSFKWGESDP-LPYVVY 140 (315)
T ss_dssp TTEEEECCCBSSC---EESCEEEE-ETTE-EEEECCEESST---------TCCBCCCEEEEETTTTEEEECCC-CSSCCB
T ss_pred CCeEEECCCCCcc---hhceeEEE-ECCE-EEEEeCCcCCC---------CCcccceEEEECCCCCcEeECCC-CCCccc
Confidence 8887655332111 11122333 3566 88875310000 01124569999999988887543 2222
Q ss_pred -ceEEEecCCCeEEEEecC------CceEEEEEccCCCCCcceeeeeCC--CCCCeeEECCCCCEEEEEec
Q 046018 155 -NGVALSRDRTFILIAETS------NCRILRFWLHGPNSGKQDVFAELP--GFPDNVRSNSNGEFWVALHA 216 (310)
Q Consensus 155 -~gi~~~~d~~~lyv~~~~------~~~i~~~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~G~l~va~~~ 216 (310)
...+. -+++ ||+..-. .+.+++||+... ....+...| ..-..+++ -++.||+....
T Consensus 141 ~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~ 205 (315)
T 4asc_A 141 GHTVLS-HMDL-VYVIGGKGSDRKCLNKMCVYDPKKF---EWKELAPMQTARSLFGATV-HDGRIIVAAGV 205 (315)
T ss_dssp SCEEEE-ETTE-EEEECCBCTTSCBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEE-ETTEEEEEEEE
T ss_pred ceeEEE-ECCE-EEEEeCCCCCCcccceEEEEeCCCC---eEEECCCCCCchhceEEEE-ECCEEEEEecc
Confidence 23333 3454 8876432 257999998743 222332222 11123333 25788886443
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.43 E-value=4.1 Score=33.83 Aligned_cols=106 Identities=12% Similarity=0.122 Sum_probs=61.2
Q ss_pred CCcEEEEECC------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCC
Q 046018 58 TGDLYIADAY------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKT 131 (310)
Q Consensus 58 ~g~l~v~~~~------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~ 131 (310)
+++||+.... ..+.++|+.+.+.+.+...+.. .....+++. +++ ||+..-... ....
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~~~-~~~-iyv~GG~~~------------~~~~ 183 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR---RIGVGVAVL-NRL-LYAVGGFDG------------TNRL 183 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC---CBSCEEEEE-TTE-EEEECCBCS------------SCBC
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc---ccceEEEEE-CCE-EEEEeCCCC------------CCcC
Confidence 5789988542 2488999998887655332111 122233333 666 888752110 0114
Q ss_pred ceEEEEeCCCCeEEEEecCCccc---ceEEEecCCCeEEEEecC-----CceEEEEEccC
Q 046018 132 GRLLKYEKTTKEVTILLQGLAFA---NGVALSRDRTFILIAETS-----NCRILRFWLHG 183 (310)
Q Consensus 132 g~v~~~d~~~~~~~~~~~~~~~~---~gi~~~~d~~~lyv~~~~-----~~~i~~~~~~~ 183 (310)
..+++||+++.+.+.+.. .+.+ ..++.. +++ ||+..-. ...+++||+..
T Consensus 184 ~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 184 NSAECYYPERNEWRMITA-MNTIRSGAGVCVL-HNC-IYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp CCEEEEETTTTEEEECCC-CSSCCBSCEEEEE-TTE-EEEECCBCSSSBCCCEEEEETTT
T ss_pred ceEEEEeCCCCeEeeCCC-CCCccccceEEEE-CCE-EEEEeCCCCCCccceEEEEeCCC
Confidence 569999999988886542 2222 233333 444 7776422 36799999874
No 334
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.15 E-value=4.4 Score=33.52 Aligned_cols=139 Identities=12% Similarity=0.097 Sum_probs=73.1
Q ss_pred CCcEEEEECC-------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCC
Q 046018 58 TGDLYIADAY-------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDK 130 (310)
Q Consensus 58 ~g~l~v~~~~-------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~ 130 (310)
+++||+.... ..+.++|+.+.+.+.+...+ ......-++.-+++ ||+..-...... ....
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p----~~r~~~~~~~~~~~-iyv~GG~~~~~~--------~~~~ 167 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML----TQRCSHGMVEANGL-IYVCGGSLGNNV--------SGRV 167 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS----SCCBSCEEEEETTE-EEEECCEESCTT--------TCEE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc----CCcceeEEEEECCE-EEEECCCCCCCC--------cccc
Confidence 5789987542 23899999998876653321 11222233334666 888752110000 0001
Q ss_pred CceEEEEeCCCCeEEEEecCCcc--cceEEEecCCCeEEEEecC-----CceEEEEEccCCCCCcceeeeeCC--CCCCe
Q 046018 131 TGRLLKYEKTTKEVTILLQGLAF--ANGVALSRDRTFILIAETS-----NCRILRFWLHGPNSGKQDVFAELP--GFPDN 201 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~~~~~~~~--~~gi~~~~d~~~lyv~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~--~~p~~ 201 (310)
...+++||+++.+.+.+...... ...++.. +++ ||+..-. ...+++||+... ....+..+| ..-..
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~ 242 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDK-IFAVGGQNGLGGLDNVEYYDIKLN---EWKMVSPMPWKGVTVK 242 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE-EEEECCEETTEEBCCEEEEETTTT---EEEECCCCSCCBSCCE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE-CCE-EEEEeCCCCCCCCceEEEeeCCCC---cEEECCCCCCCcccee
Confidence 45699999999988876532111 1234433 444 7776321 357899998643 223333322 11122
Q ss_pred eEECCCCCEEEEEe
Q 046018 202 VRSNSNGEFWVALH 215 (310)
Q Consensus 202 i~~d~~G~l~va~~ 215 (310)
+++- ++.||+...
T Consensus 243 ~~~~-~~~i~v~GG 255 (306)
T 3ii7_A 243 CAAV-GSIVYVLAG 255 (306)
T ss_dssp EEEE-TTEEEEEEC
T ss_pred EEEE-CCEEEEEeC
Confidence 3332 567887654
No 335
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.96 E-value=4.7 Score=33.47 Aligned_cols=134 Identities=13% Similarity=0.042 Sum_probs=71.4
Q ss_pred CCcEEEEECC----------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhc
Q 046018 58 TGDLYIADAY----------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILS 127 (310)
Q Consensus 58 ~g~l~v~~~~----------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~ 127 (310)
+++||+.... ..++++|+.+.+.+.+...+ .......++.-+++ ||+..-...
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p----~~r~~~~~~~~~~~-iyv~GG~~~------------ 132 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMS----VPRNRIGVGVIDGH-IYAVGGSHG------------ 132 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCS----SCCBTCEEEEETTE-EEEECCEET------------
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCC----cCccccEEEEECCE-EEEEcCCCC------------
Confidence 5788887543 23889999988876553221 11222233333666 888742100
Q ss_pred CCCCceEEEEeCCCCeEEEEecCCcc--cceEEEecCCCeEEEEecC-----CceEEEEEccCCCCCcceeeeeCC--CC
Q 046018 128 GDKTGRLLKYEKTTKEVTILLQGLAF--ANGVALSRDRTFILIAETS-----NCRILRFWLHGPNSGKQDVFAELP--GF 198 (310)
Q Consensus 128 ~~~~g~v~~~d~~~~~~~~~~~~~~~--~~gi~~~~d~~~lyv~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~--~~ 198 (310)
......+++||+.+.+.+.+...... ....+.. ++ .||+..-. .+.+++||+... ....+...+ ..
T Consensus 133 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~ 207 (308)
T 1zgk_A 133 CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NR-LLYAVGGFDGTNRLNSAECYYPERN---EWRMITAMNTIRS 207 (308)
T ss_dssp TEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TT-EEEEECCBCSSCBCCCEEEEETTTT---EEEECCCCSSCCB
T ss_pred CcccccEEEECCCCCeEeECCCCCccccceEEEEE-CC-EEEEEeCCCCCCcCceEEEEeCCCC---eEeeCCCCCCccc
Confidence 00134689999999888875432211 1233333 44 47775321 357999998643 222222222 11
Q ss_pred CCeeEECCCCCEEEEE
Q 046018 199 PDNVRSNSNGEFWVAL 214 (310)
Q Consensus 199 p~~i~~d~~G~l~va~ 214 (310)
-..+++. ++.||+..
T Consensus 208 ~~~~~~~-~~~iyv~G 222 (308)
T 1zgk_A 208 GAGVCVL-HNCIYAAG 222 (308)
T ss_dssp SCEEEEE-TTEEEEEC
T ss_pred cceEEEE-CCEEEEEe
Confidence 2233333 57788764
No 336
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.94 E-value=4.8 Score=33.55 Aligned_cols=74 Identities=12% Similarity=0.126 Sum_probs=43.8
Q ss_pred CCcEEEEECC-------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCC
Q 046018 58 TGDLYIADAY-------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDK 130 (310)
Q Consensus 58 ~g~l~v~~~~-------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~ 130 (310)
+++||+.... ..+.++|+.+.+.+.+...+.. .....++ .-+++ ||+..-... ...
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---r~~~~~~-~~~~~-iyv~GG~~~------------~~~ 220 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTP---RSMFGVA-IHKGK-IVIAGGVTE------------DGL 220 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSC---CBSCEEE-EETTE-EEEEEEEET------------TEE
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCC---cccceEE-EECCE-EEEEcCcCC------------CCc
Confidence 6789987642 2389999999887665322111 1122233 33566 887752100 001
Q ss_pred CceEEEEeCCCCeEEEEe
Q 046018 131 TGRLLKYEKTTKEVTILL 148 (310)
Q Consensus 131 ~g~v~~~d~~~~~~~~~~ 148 (310)
...+++||+++.+.+.+.
T Consensus 221 ~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 221 SASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp EEEEEEEETTTCCEEECC
T ss_pred cceEEEEECCCCeEEECC
Confidence 346889999998888754
No 337
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.73 E-value=4.9 Score=33.16 Aligned_cols=134 Identities=10% Similarity=-0.005 Sum_probs=71.8
Q ss_pred CCcEEEEECC------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCC
Q 046018 58 TGDLYIADAY------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKT 131 (310)
Q Consensus 58 ~g~l~v~~~~------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~ 131 (310)
++.||+.... ..+.++|+.+.+.+.+...+ ......-++.-+++ ||+..-... ....
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p----~~r~~~~~~~~~~~-iyv~GG~~~------------~~~~ 123 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMR----DRRSTLGAAVLNGL-LYAVGGFDG------------STGL 123 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCS----SCCBSCEEEEETTE-EEEEEEECS------------SCEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCC----ccccceEEEEECCE-EEEEcCCCC------------CccC
Confidence 5789987542 23899999998877654321 11222223334666 887642100 0113
Q ss_pred ceEEEEeCCCCeEEEEecCCcc--cceEEEecCCCeEEEEecC-------CceEEEEEccCCCCCcceeeeeCC--CCCC
Q 046018 132 GRLLKYEKTTKEVTILLQGLAF--ANGVALSRDRTFILIAETS-------NCRILRFWLHGPNSGKQDVFAELP--GFPD 200 (310)
Q Consensus 132 g~v~~~d~~~~~~~~~~~~~~~--~~gi~~~~d~~~lyv~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~--~~p~ 200 (310)
..+++||+.+.+.+.+...... ...++.. +++ ||+..-. ...+++||+... ....+...| ..-.
T Consensus 124 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~ 198 (302)
T 2xn4_A 124 SSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GGL-LYAVGGYDVASRQCLSTVECYNATTN---EWTYIAEMSTRRSGA 198 (302)
T ss_dssp EEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE-EEEECCEETTTTEECCCEEEEETTTT---EEEEECCCSSCCBSC
T ss_pred ceEEEEeCCCCeEeecCCCCCcccCceEEEE-CCE-EEEEeCCCCCCCccccEEEEEeCCCC---cEEECCCCccccccc
Confidence 4689999999988876432211 1233333 444 8875321 356899998643 223333322 1112
Q ss_pred eeEECCCCCEEEEE
Q 046018 201 NVRSNSNGEFWVAL 214 (310)
Q Consensus 201 ~i~~d~~G~l~va~ 214 (310)
.+++ -++.||+..
T Consensus 199 ~~~~-~~~~iyv~G 211 (302)
T 2xn4_A 199 GVGV-LNNLLYAVG 211 (302)
T ss_dssp EEEE-ETTEEEEEC
T ss_pred cEEE-ECCEEEEEC
Confidence 3333 257788764
No 338
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.53 E-value=5.2 Score=33.07 Aligned_cols=133 Identities=8% Similarity=-0.034 Sum_probs=72.7
Q ss_pred CCcEEEEECC-----CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCc
Q 046018 58 TGDLYIADAY-----LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTG 132 (310)
Q Consensus 58 ~g~l~v~~~~-----~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g 132 (310)
++.||+.... ..+.++|+.+.+.+.+...+. ......++.-+++ ||+..-... ......
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~----~r~~~~~~~~~~~-iyv~GG~~~-----------~~~~~~ 118 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT----PRDSLAACAAEGK-IYTSGGSEV-----------GNSALY 118 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS----CCBSCEEEEETTE-EEEECCBBT-----------TBSCCC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc----cccceeEEEECCE-EEEECCCCC-----------CCcEee
Confidence 5788887542 248899999988776643221 1222233333666 888652210 011245
Q ss_pred eEEEEeCCCCeEEEEecCCccc---ceEEEecCCCeEEEEecC---------CceEEEEEccCCCCCcceeeeeCC--CC
Q 046018 133 RLLKYEKTTKEVTILLQGLAFA---NGVALSRDRTFILIAETS---------NCRILRFWLHGPNSGKQDVFAELP--GF 198 (310)
Q Consensus 133 ~v~~~d~~~~~~~~~~~~~~~~---~gi~~~~d~~~lyv~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~--~~ 198 (310)
.+++||+.+.+.+.+.. .+.+ ..++.. +++ ||+..-. .+.+++||+... ....+...+ ..
T Consensus 119 ~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~ 192 (306)
T 3ii7_A 119 LFECYDTRTESWHTKPS-MLTQRCSHGMVEA-NGL-IYVCGGSLGNNVSGRVLNSCEVYDPATE---TWTELCPMIEARK 192 (306)
T ss_dssp CEEEEETTTTEEEEECC-CSSCCBSCEEEEE-TTE-EEEECCEESCTTTCEECCCEEEEETTTT---EEEEECCCSSCCB
T ss_pred eEEEEeCCCCceEeCCC-CcCCcceeEEEEE-CCE-EEEECCCCCCCCcccccceEEEeCCCCC---eEEECCCccchhh
Confidence 69999999998887643 2222 233333 454 8775421 467899998743 233333322 12
Q ss_pred CCeeEECCCCCEEEE
Q 046018 199 PDNVRSNSNGEFWVA 213 (310)
Q Consensus 199 p~~i~~d~~G~l~va 213 (310)
-..+++- ++.||+.
T Consensus 193 ~~~~~~~-~~~i~v~ 206 (306)
T 3ii7_A 193 NHGLVFV-KDKIFAV 206 (306)
T ss_dssp SCEEEEE-TTEEEEE
T ss_pred cceEEEE-CCEEEEE
Confidence 2233332 5678875
No 339
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=91.42 E-value=9.2 Score=35.74 Aligned_cols=57 Identities=9% Similarity=0.007 Sum_probs=36.4
Q ss_pred eEEEeCCCCcEEEEECCC--ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeC
Q 046018 51 GIRFDKKTGDLYIADAYL--GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDS 112 (310)
Q Consensus 51 gl~~d~~~g~l~v~~~~~--gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~ 112 (310)
+.++.. +|+||+..... .+.++|+.+.+.+.+.... . ...-..+++.++|+ ||+..-
T Consensus 247 ~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~-~--~R~~~s~~~~~dg~-iyv~GG 305 (656)
T 1k3i_A 247 GISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQ-V--ARGYQSSATMSDGR-VFTIGG 305 (656)
T ss_dssp EEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCCCS-S--CCSSCEEEECTTSC-EEEECC
T ss_pred cccCCC-CCCEEEeCCCCCCceEEecCcCCceeECCCCC-c--cccccceEEecCCe-EEEEeC
Confidence 466666 88999987642 4999999988766543211 1 11223456667888 887653
No 340
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.42 E-value=5.5 Score=33.14 Aligned_cols=139 Identities=13% Similarity=0.101 Sum_probs=75.0
Q ss_pred eEEEeCCCCcEEEEECC---------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhh
Q 046018 51 GIRFDKKTGDLYIADAY---------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQF 121 (310)
Q Consensus 51 gl~~d~~~g~l~v~~~~---------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~ 121 (310)
+++.. +++||+.... ..+.++|+.+.+.+.+... +......-++.-+++ ||+..-...
T Consensus 93 ~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~----p~~r~~~~~~~~~~~-iyv~GG~~~------ 159 (315)
T 4asc_A 93 GLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPL----PYVVYGHTVLSHMDL-VYVIGGKGS------ 159 (315)
T ss_dssp EEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCC----SSCCBSCEEEEETTE-EEEECCBCT------
T ss_pred eEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCC----CCcccceeEEEECCE-EEEEeCCCC------
Confidence 44443 5789988651 2389999999877655332 111223333445666 887752200
Q ss_pred hhhhhcCCCCceEEEEeCCCCeEEEEecCCccc---ceEEEecCCCeEEEEecC-----CceEEEEEccCCCCCcceeee
Q 046018 122 MSSILSGDKTGRLLKYEKTTKEVTILLQGLAFA---NGVALSRDRTFILIAETS-----NCRILRFWLHGPNSGKQDVFA 193 (310)
Q Consensus 122 ~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~~---~gi~~~~d~~~lyv~~~~-----~~~i~~~~~~~~~~~~~~~~~ 193 (310)
.......+++||+.+.+.+.+.. .+.| ...+.. +++ ||+..-. .+.+++||+... ....+.
T Consensus 160 -----~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~ 228 (315)
T 4asc_A 160 -----DRKCLNKMCVYDPKKFEWKELAP-MQTARSLFGATVH-DGR-IIVAAGVTDTGLTSSAEVYSITDN---KWAPFE 228 (315)
T ss_dssp -----TSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE-TTE-EEEEEEECSSSEEEEEEEEETTTT---EEEEEC
T ss_pred -----CCcccceEEEEeCCCCeEEECCC-CCCchhceEEEEE-CCE-EEEEeccCCCCccceEEEEECCCC---eEEECC
Confidence 01124569999999988887543 2222 233333 454 7775322 247899998643 233333
Q ss_pred eCC--CCCCeeEECCCCCEEEEE
Q 046018 194 ELP--GFPDNVRSNSNGEFWVAL 214 (310)
Q Consensus 194 ~~~--~~p~~i~~d~~G~l~va~ 214 (310)
..| ..-..++. -++.||+..
T Consensus 229 ~~p~~r~~~~~~~-~~~~l~v~G 250 (315)
T 4asc_A 229 AFPQERSSLSLVS-LVGTLYAIG 250 (315)
T ss_dssp CCSSCCBSCEEEE-ETTEEEEEE
T ss_pred CCCCcccceeEEE-ECCEEEEEC
Confidence 322 11123333 256787754
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.96 E-value=6.6 Score=33.25 Aligned_cols=119 Identities=12% Similarity=0.104 Sum_probs=61.6
Q ss_pred CCcEEEEECC-----------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchh--hhhhhh-
Q 046018 58 TGDLYIADAY-----------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQ--RRQFMS- 123 (310)
Q Consensus 58 ~g~l~v~~~~-----------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~--~~~~~~- 123 (310)
+++|||.... ..++++|+.+.+.+.+.... +......-++..+++ ||+..-...-. ......
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~---p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~~ 140 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA---PMGMAGHVTFVHNGK-AYVTGGVNQNIFNGYFEDLN 140 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC---SSCCSSEEEEEETTE-EEEEECCCHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC---CcccccceEEEECCE-EEEEeCcCCCcCcccccchh
Confidence 5789886443 23889999998876553321 122222323336676 88876321100 000000
Q ss_pred --------------hhhc-----CCCCceEEEEeCCCCeEEEEecCCcc--c-ceEEEecCCCeEEEEec------CCce
Q 046018 124 --------------SILS-----GDKTGRLLKYEKTTKEVTILLQGLAF--A-NGVALSRDRTFILIAET------SNCR 175 (310)
Q Consensus 124 --------------~~~~-----~~~~g~v~~~d~~~~~~~~~~~~~~~--~-~gi~~~~d~~~lyv~~~------~~~~ 175 (310)
..+. ......+++||+++.+++.+...... . ..++.. ++ .||+..- ....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~ 218 (357)
T 2uvk_A 141 EAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GD-KTWLINGEAKPGLRTDA 218 (357)
T ss_dssp HHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TT-EEEEECCEEETTEECCC
T ss_pred hcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CC-EEEEEeeecCCCcccCc
Confidence 0000 01135799999999988876532211 1 233333 44 4777532 1457
Q ss_pred EEEEEcc
Q 046018 176 ILRFWLH 182 (310)
Q Consensus 176 i~~~~~~ 182 (310)
+++|+++
T Consensus 219 v~~~d~d 225 (357)
T 2uvk_A 219 VFELDFT 225 (357)
T ss_dssp EEEEECC
T ss_pred eEEEEec
Confidence 8888864
No 342
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=90.95 E-value=3.8 Score=35.82 Aligned_cols=133 Identities=13% Similarity=0.065 Sum_probs=76.9
Q ss_pred eceEEEeCCCCcEEEEECCCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcC
Q 046018 49 PLGIRFDKKTGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSG 128 (310)
Q Consensus 49 p~gl~~d~~~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~ 128 (310)
+..|++ . +..|+++ ...+|..+|..+.......... .. ..+++...+. + +.+.+
T Consensus 90 V~~l~f-d-~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~-~~---~v~~i~~~~p-~-~av~~----------------- 143 (388)
T 1xip_A 90 VIFVCF-H-GDQVLVS-TRNALYSLDLEELSEFRTVTSF-EK---PVFQLKNVNN-T-LVILN----------------- 143 (388)
T ss_dssp EEEEEE-E-TTEEEEE-ESSEEEEEESSSTTCEEEEEEC-SS---CEEEEEECSS-E-EEEEE-----------------
T ss_pred eeEEEE-C-CCEEEEE-cCCcEEEEEchhhhccCcccee-ec---ceeeEEecCC-C-EEEEE-----------------
Confidence 888999 3 6778888 4456888887654321111111 11 1234443333 2 44443
Q ss_pred CCCceEEEEeCCCCeEEEEecCCcccceEEEecCCCeEEEEecCCceEEEEEccCCCCCcceeeee---------CCCCC
Q 046018 129 DKTGRLLKYEKTTKEVTILLQGLAFANGVALSRDRTFILIAETSNCRILRFWLHGPNSGKQDVFAE---------LPGFP 199 (310)
Q Consensus 129 ~~~g~v~~~d~~~~~~~~~~~~~~~~~gi~~~~d~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~~~---------~~~~p 199 (310)
.+|.|+.||.+++..+.+. .....++|+|+| ++++ ..++.+.+|++++........+.. ....+
T Consensus 144 -~dG~L~v~dl~~~~~~~~~---~~Vs~v~WSpkG--~~vg-~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V 216 (388)
T 1xip_A 144 -SVNDLSALDLRTKSTKQLA---QNVTSFDVTNSQ--LAVL-LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSP 216 (388)
T ss_dssp -TTSEEEEEETTTCCEEEEE---ESEEEEEECSSE--EEEE-ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEE
T ss_pred -CCCCEEEEEccCCcccccc---CCceEEEEcCCc--eEEE-EcCCcEEEEcCCCccccccceecCCcccccccCCCeeE
Confidence 2788999999877665432 356789999998 4444 566889999887643110111210 01234
Q ss_pred CeeEECCCCCEEEEE
Q 046018 200 DNVRSNSNGEFWVAL 214 (310)
Q Consensus 200 ~~i~~d~~G~l~va~ 214 (310)
..+.+-+++.+.++-
T Consensus 217 ~sI~wl~~~~flv~y 231 (388)
T 1xip_A 217 LSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEESSSSEEEEEE
T ss_pred EEEEEecCCeEEEEE
Confidence 567777777665543
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.87 E-value=11 Score=35.63 Aligned_cols=145 Identities=7% Similarity=-0.009 Sum_probs=79.2
Q ss_pred eEEEeCCCCcEEEEECC-------CceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhh
Q 046018 51 GIRFDKKTGDLYIADAY-------LGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMS 123 (310)
Q Consensus 51 gl~~d~~~g~l~v~~~~-------~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~ 123 (310)
.++.-..+++||+.... ..++++|+.+.+.+.+...+ ....-...++-.+++ ||+..-..
T Consensus 444 s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p---~~R~~h~~~~~~~~~-iyv~GG~~--------- 510 (695)
T 2zwa_A 444 TFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLS---HTRFRHSACSLPDGN-VLILGGVT--------- 510 (695)
T ss_dssp EEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCS---BCCBSCEEEECTTSC-EEEECCBC---------
T ss_pred EEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCC---CCcccceEEEEcCCE-EEEECCCC---------
Confidence 44443114689888642 23889999998776553221 111223344435888 88875211
Q ss_pred hhhcCCCCceEEEEeCCCCeEEEEecC--Cccc---ce-EEEecCCCeEEEEecC-------CceEEEEEccCCCC---C
Q 046018 124 SILSGDKTGRLLKYEKTTKEVTILLQG--LAFA---NG-VALSRDRTFILIAETS-------NCRILRFWLHGPNS---G 187 (310)
Q Consensus 124 ~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~~---~g-i~~~~d~~~lyv~~~~-------~~~i~~~~~~~~~~---~ 187 (310)
..+.+++||+.+.+++.+... .+.| .. +++..+.+.||+..-. .+.+++||+....- -
T Consensus 511 ------~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~ 584 (695)
T 2zwa_A 511 ------EGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPI 584 (695)
T ss_dssp ------SSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCE
T ss_pred ------CCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccce
Confidence 112799999999998876542 1111 23 5556553458886422 35799999875421 0
Q ss_pred cceeeeeC---CCCCCeeEECCCCCEEEEE
Q 046018 188 KQDVFAEL---PGFPDNVRSNSNGEFWVAL 214 (310)
Q Consensus 188 ~~~~~~~~---~~~p~~i~~d~~G~l~va~ 214 (310)
....+... +..-..+++-.+|.||+..
T Consensus 585 ~W~~~~~~p~~~R~~~~~~~~~~~~iyv~G 614 (695)
T 2zwa_A 585 TVIKKLQHPLFQRYGSQIKYITPRKLLIVG 614 (695)
T ss_dssp EEEEEEECGGGCCBSCEEEEEETTEEEEEC
T ss_pred EEEEcCCCCCCCcccceEEEeCCCEEEEEC
Confidence 02222221 2222344444447888863
No 344
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.50 E-value=6.4 Score=32.35 Aligned_cols=134 Identities=10% Similarity=0.076 Sum_probs=72.1
Q ss_pred CCcEEEEECC------CceEEEeCCCCe---EEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcC
Q 046018 58 TGDLYIADAY------LGFQVVGPEGGL---ATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSG 128 (310)
Q Consensus 58 ~g~l~v~~~~------~gi~~~d~~~~~---~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~ 128 (310)
++.||+.... ..++++|+.+.+ .+.+...+ .......++.-+++ ||+..-... .
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p----~~r~~~~~~~~~~~-lyv~GG~~~------------~ 124 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMN----VRRGLAGATTLGDM-IYVSGGFDG------------S 124 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCS----SCCBSCEEEEETTE-EEEECCBCS------------S
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCC----CCccceeEEEECCE-EEEEcccCC------------C
Confidence 5788887542 238999998887 66553321 11222233333666 888752210 1
Q ss_pred CCCceEEEEeCCCCeEEEEecCCcc--cceEEEecCCCeEEEEec-----CCceEEEEEccCCCCCcceeeeeCC--CCC
Q 046018 129 DKTGRLLKYEKTTKEVTILLQGLAF--ANGVALSRDRTFILIAET-----SNCRILRFWLHGPNSGKQDVFAELP--GFP 199 (310)
Q Consensus 129 ~~~g~v~~~d~~~~~~~~~~~~~~~--~~gi~~~~d~~~lyv~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~--~~p 199 (310)
.....+++||+.+.+.+.+...... ....+.. +++ ||+..- ....+++||+... ....+...| ..-
T Consensus 125 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r~~ 199 (301)
T 2vpj_A 125 RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-SGV-IYCLGGYDGLNILNSVEKYDPHTG---HWTNVTPMATKRSG 199 (301)
T ss_dssp CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-TTE-EEEECCBCSSCBCCCEEEEETTTT---EEEEECCCSSCCBS
T ss_pred cccceEEEEcCCCCeEEECCCCCCCcccceEEEE-CCE-EEEECCCCCCcccceEEEEeCCCC---cEEeCCCCCccccc
Confidence 1245699999999988876532211 1233333 554 777632 2367999998643 233333322 111
Q ss_pred CeeEECCCCCEEEEE
Q 046018 200 DNVRSNSNGEFWVAL 214 (310)
Q Consensus 200 ~~i~~d~~G~l~va~ 214 (310)
..++. -++.||+..
T Consensus 200 ~~~~~-~~~~i~v~G 213 (301)
T 2vpj_A 200 AGVAL-LNDHIYVVG 213 (301)
T ss_dssp CEEEE-ETTEEEEEC
T ss_pred ceEEE-ECCEEEEEe
Confidence 22333 256787764
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.72 E-value=9.4 Score=31.72 Aligned_cols=136 Identities=13% Similarity=0.078 Sum_probs=71.8
Q ss_pred CCcEEEEECC----C--------ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhh
Q 046018 58 TGDLYIADAY----L--------GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSI 125 (310)
Q Consensus 58 ~g~l~v~~~~----~--------gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~ 125 (310)
++.||+.... . .++++|+.+.+.+.+...+.. ..-..+++ -+++ ||+..-....
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---r~~~~~~~-~~~~-iyv~GG~~~~--------- 121 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA---RCLFGLGE-VDDK-IYVVAGKDLQ--------- 121 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC---BCSCEEEE-ETTE-EEEEEEEBTT---------
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc---ccccceEE-ECCE-EEEEcCccCC---------
Confidence 6788887651 0 177889998877655322111 12223333 3566 8876521000
Q ss_pred hcCCCCceEEEEeCCCCeEEEEecCCccc---ceEEEecCCCeEEEEecC------CceEEEEEccCCCCCcceeeeeCC
Q 046018 126 LSGDKTGRLLKYEKTTKEVTILLQGLAFA---NGVALSRDRTFILIAETS------NCRILRFWLHGPNSGKQDVFAELP 196 (310)
Q Consensus 126 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~~---~gi~~~~d~~~lyv~~~~------~~~i~~~~~~~~~~~~~~~~~~~~ 196 (310)
.......+++||+.+.+.+.+.. .+.+ ...+. .+++ ||+..-. .+.+++||+... ........+
T Consensus 122 -~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~p 194 (318)
T 2woz_A 122 -TEASLDSVLCYDPVAAKWSEVKN-LPIKVYGHNVIS-HNGM-IYCLGGKTDDKKCTNRVFIYNPKKG---DWKDLAPMK 194 (318)
T ss_dssp -TCCEEEEEEEEETTTTEEEEECC-CSSCEESCEEEE-ETTE-EEEECCEESSSCBCCCEEEEETTTT---EEEEECCCS
T ss_pred -CCcccceEEEEeCCCCCEeECCC-CCCcccccEEEE-ECCE-EEEEcCCCCCCCccceEEEEcCCCC---EEEECCCCC
Confidence 01123468999999998887643 2222 23333 3554 7775321 356999998743 233333322
Q ss_pred --CCCCeeEECCCCCEEEEEe
Q 046018 197 --GFPDNVRSNSNGEFWVALH 215 (310)
Q Consensus 197 --~~p~~i~~d~~G~l~va~~ 215 (310)
..-..+++ -++.||+...
T Consensus 195 ~~r~~~~~~~-~~~~iyv~GG 214 (318)
T 2woz_A 195 TPRSMFGVAI-HKGKIVIAGG 214 (318)
T ss_dssp SCCBSCEEEE-ETTEEEEEEE
T ss_pred CCcccceEEE-ECCEEEEEcC
Confidence 22223333 3578888643
No 346
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=85.96 E-value=24 Score=33.51 Aligned_cols=124 Identities=11% Similarity=0.113 Sum_probs=68.6
Q ss_pred eeceEEEeCCC-CcEEEEECCCceEEEeCCCCeEEEEEeecCCc--cccCCcceEEeCC--CCEEEEEeCCC--chhhhh
Q 046018 48 RPLGIRFDKKT-GDLYIADAYLGFQVVGPEGGLATQLVTEAAGQ--PLRFTNDLDIDEH--KGVIYFTDSST--SFQRRQ 120 (310)
Q Consensus 48 ~p~gl~~d~~~-g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~--~~~~~~~i~~d~~--g~~l~v~~~~~--~~~~~~ 120 (310)
+..+|++++.+ +.||++....+|++-+-.+...+.+....... .......|++||. +. +|++.... .+
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~-v~v~~~~~~~~~---- 98 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNR-VYIVAGMYTNDW---- 98 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTC-EEEEECSCSSSS----
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCE-EEEEeccccccc----
Confidence 77899998733 68999876778999876666655543211100 1234678999973 45 99886320 11
Q ss_pred hhhhhhcCCCCceEEEEeCCCCeEEEEecCCc---------ccceEEEecC-CCeEEEEecCCceEEEEEccCC
Q 046018 121 FMSSILSGDKTGRLLKYEKTTKEVTILLQGLA---------FANGVALSRD-RTFILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 121 ~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~---------~~~gi~~~~d-~~~lyv~~~~~~~i~~~~~~~~ 184 (310)
....+.|++=.=.+..++.+..... ....|+++|. .+.||++......|++= .+++
T Consensus 99 -------~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S-~DgG 164 (737)
T 2cn3_A 99 -------LPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRS-TDYG 164 (737)
T ss_dssp -------SCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEE-SSTT
T ss_pred -------ccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEe-CCCC
Confidence 0012446554322234454332211 1257899885 45678764222566643 4443
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=81.59 E-value=36 Score=32.09 Aligned_cols=120 Identities=11% Similarity=0.050 Sum_probs=62.6
Q ss_pred ceEEEeCCCCcEEEEECCC---ceEEEeCCCCeEEEEEeecCCc-cccCCcceEEeCC-CCEEEEEeCCCchhhhhhhhh
Q 046018 50 LGIRFDKKTGDLYIADAYL---GFQVVGPEGGLATQLVTEAAGQ-PLRFTNDLDIDEH-KGVIYFTDSSTSFQRRQFMSS 124 (310)
Q Consensus 50 ~gl~~d~~~g~l~v~~~~~---gi~~~d~~~~~~~~~~~~~~~~-~~~~~~~i~~d~~-g~~l~v~~~~~~~~~~~~~~~ 124 (310)
+.++.-. +++|||..... .+.++|+.+...+.+......+ +......++++.+ ++ ||+......-
T Consensus 493 h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~-iyv~GG~~~~-------- 562 (695)
T 2zwa_A 493 HSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ-GIILGGGFMD-------- 562 (695)
T ss_dssp CEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTE-EEEECCBCTT--------
T ss_pred ceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCE-EEEECCcCCC--------
Confidence 3444434 67899986542 4899999998876553210011 1112222555665 66 8887522100
Q ss_pred hhcCCCCceEEEEeCCCCe------EEEEecCCcc---cceEEEecCCCeEEEEec--------CCceEEEEEcc
Q 046018 125 ILSGDKTGRLLKYEKTTKE------VTILLQGLAF---ANGVALSRDRTFILIAET--------SNCRILRFWLH 182 (310)
Q Consensus 125 ~~~~~~~g~v~~~d~~~~~------~~~~~~~~~~---~~gi~~~~d~~~lyv~~~--------~~~~i~~~~~~ 182 (310)
.......+++||+++.+ ++.+...... ...++...+++ ||+..- ....|++||+.
T Consensus 563 --~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 563 --QTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK-LLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp --SSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE-EEEECCBCSSCCCCTTTSEEEEETT
T ss_pred --CCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE-EEEECCccCCCCCCCCCeEEEEECC
Confidence 00124569999998887 5655431111 22344443344 666432 12446666654
No 348
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=79.87 E-value=26 Score=29.43 Aligned_cols=126 Identities=10% Similarity=0.004 Sum_probs=60.1
Q ss_pred ceEEEeCCCCeEEEEEeecCCccccCCcceEEeCCCCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeC--CCCeEEE
Q 046018 69 GFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEHKGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEK--TTKEVTI 146 (310)
Q Consensus 69 gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~--~~~~~~~ 146 (310)
.+.++|+.+.+.+.+...+... ..-..+++ -+++ ||+..-... .+.....++.||. ++.+++.
T Consensus 169 ~v~~yd~~~~~W~~~~~~p~~~--~~~~~~~~-~~~~-iyv~GG~~~-----------~~~~~~~v~~~d~d~~~~~W~~ 233 (357)
T 2uvk_A 169 FLLSFDPSTQQWSYAGESPWYG--TAGAAVVN-KGDK-TWLINGEAK-----------PGLRTDAVFELDFTGNNLKWNK 233 (357)
T ss_dssp EEEEEETTTTEEEEEEECSSCC--CBSCEEEE-ETTE-EEEECCEEE-----------TTEECCCEEEEECC---CEEEE
T ss_pred cEEEEeCCCCcEEECCCCCCCC--cccccEEE-ECCE-EEEEeeecC-----------CCcccCceEEEEecCCCCcEEe
Confidence 4889999998887664332111 11123333 3555 887642100 0011445777765 7777776
Q ss_pred EecCCcccc---e-EEEecCCCeEEEEecCC----------------------ceEEEEEccCCCCCcceeeeeCC--CC
Q 046018 147 LLQGLAFAN---G-VALSRDRTFILIAETSN----------------------CRILRFWLHGPNSGKQDVFAELP--GF 198 (310)
Q Consensus 147 ~~~~~~~~~---g-i~~~~d~~~lyv~~~~~----------------------~~i~~~~~~~~~~~~~~~~~~~~--~~ 198 (310)
+.. ...|. + -+...+++ ||+..-.+ ..+++||++.. ....+..+| ..
T Consensus 234 ~~~-~~~~~~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~ 308 (357)
T 2uvk_A 234 LAP-VSSPDGVAGGFAGISNDS-LIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG---KWDKSGELSQGRA 308 (357)
T ss_dssp CCC-SSTTTCCBSCEEEEETTE-EEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC------CEEEEECSSCCB
T ss_pred cCC-CCCCcccccceEEEECCE-EEEEcCccccCCcccccccceeccccccceeeEEEEecCCC---ceeeCCCCCCCcc
Confidence 543 22221 2 12333554 77753211 35788988743 233344433 22
Q ss_pred CCeeEECCCCCEEEEEe
Q 046018 199 PDNVRSNSNGEFWVALH 215 (310)
Q Consensus 199 p~~i~~d~~G~l~va~~ 215 (310)
-..+ +.-++.|||...
T Consensus 309 ~~~~-~~~~~~i~v~GG 324 (357)
T 2uvk_A 309 YGVS-LPWNNSLLIIGG 324 (357)
T ss_dssp SSEE-EEETTEEEEEEE
T ss_pred ccee-EEeCCEEEEEee
Confidence 1223 334677877543
No 349
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=79.53 E-value=45 Score=31.97 Aligned_cols=154 Identities=16% Similarity=0.109 Sum_probs=82.0
Q ss_pred ceeceEEEeCC-CCcEEEEECCCceEEEeCCCCeEEEEEeecCCc--cccCCcceEEeCC-CCEEEEEeCCCchhhhhhh
Q 046018 47 GRPLGIRFDKK-TGDLYIADAYLGFQVVGPEGGLATQLVTEAAGQ--PLRFTNDLDIDEH-KGVIYFTDSSTSFQRRQFM 122 (310)
Q Consensus 47 ~~p~gl~~d~~-~g~l~v~~~~~gi~~~d~~~~~~~~~~~~~~~~--~~~~~~~i~~d~~-g~~l~v~~~~~~~~~~~~~ 122 (310)
++..+|++++. .+.+|++....+|++-+-.+...+++....... ......+|+++|. .+++|++.....
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~------- 87 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYV------- 87 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCT-------
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccC-------
Confidence 57788999874 367999987778988765555555442211000 1235678999974 234888762100
Q ss_pred hhhhcCCCCceEEEEeCCCCeEEEEecCCc---------ccceEEEecC-CCeEEEEecCCceEEEEEccCCCCCcceee
Q 046018 123 SSILSGDKTGRLLKYEKTTKEVTILLQGLA---------FANGVALSRD-RTFILIAETSNCRILRFWLHGPNSGKQDVF 192 (310)
Q Consensus 123 ~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~---------~~~gi~~~~d-~~~lyv~~~~~~~i~~~~~~~~~~~~~~~~ 192 (310)
....+.|++=+=.+...+.+..... ....|+++|. .+.+|+. ...+.|++= .++++. .+.+
T Consensus 88 -----~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g-~~~~gl~~S-~DgG~T--W~~~ 158 (789)
T 1sqj_A 88 -----GDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMG-TRTEGIWKS-SDRAKT--WTNV 158 (789)
T ss_dssp -----TSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEE-CSSSCEEEE-SSTTSS--CEEE
T ss_pred -----CCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEE-eccCCEEEE-CCCCcc--cCCC
Confidence 0001556665433345665432211 1246888874 3457775 334667653 344322 2222
Q ss_pred eeCC------CCCCeeEECCC--CCEEEEEec
Q 046018 193 AELP------GFPDNVRSNSN--GEFWVALHA 216 (310)
Q Consensus 193 ~~~~------~~p~~i~~d~~--G~l~va~~~ 216 (310)
...+ .....+.+++. +.+|++...
T Consensus 159 ~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 159 TSIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TTSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred ccCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 2111 11134666653 468887754
No 350
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=79.00 E-value=7.2 Score=33.33 Aligned_cols=102 Identities=13% Similarity=0.080 Sum_probs=53.3
Q ss_pred CCceEEEEeCCCCeEEEEecCCc-ccceEEE----ecCCCeEEEEe-cCCceEEEEEccCCCCCcceeeeeCC----CCC
Q 046018 130 KTGRLLKYEKTTKEVTILLQGLA-FANGVAL----SRDRTFILIAE-TSNCRILRFWLHGPNSGKQDVFAELP----GFP 199 (310)
Q Consensus 130 ~~g~v~~~d~~~~~~~~~~~~~~-~~~gi~~----~~d~~~lyv~~-~~~~~i~~~~~~~~~~~~~~~~~~~~----~~p 199 (310)
.+|.|+.+|.++|+......... .|- +.. .+.+..+|+.. +.++.|+.++...+ ........+ ..|
T Consensus 18 ~dG~l~Ald~~tG~~~W~~~~~~~~p~-~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G---~~~~~~~~~~lv~~SP 93 (339)
T 2be1_A 18 VEGGLHAVDRRNGHIIWSIEPENFQPL-IEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG---LQKLPLSIRQLVSTSP 93 (339)
T ss_dssp TTSCEEEEETTTTEEEEEECGGGSCCS-EECCCSCTTTSSEEEEECCSTTTEEEEEETTTE---EEEEEEEHHHHHTTCS
T ss_pred CCCeEEEEECCCCcEEEEecCCccCCc-EEecCCccccCCcEEEEEECCCCEEEEEECCCC---cEEeeeccccceeccc
Confidence 37889999988887765432210 110 110 01223467766 47788988887543 111111111 111
Q ss_pred C----eeEE------CCCCCEEEEEecCCccceeeeeeccccccEEeeccc
Q 046018 200 D----NVRS------NSNGEFWVALHAKKGLFGKLILLNSWLGKTLLKLPL 240 (310)
Q Consensus 200 ~----~i~~------d~~G~l~va~~~~~~~~~~~i~~~~~~g~~~~~~~~ 240 (310)
- ...+ +.+|.+|++...+.- ...+..+|+.+.....
T Consensus 94 ~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l-----~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 94 LHLKTNIVVNDSGKIVEDEKVYTGSMRTIM-----YTINMLNGEIISAFGP 139 (339)
T ss_dssp EEEECC----------CCEEEEECEEEEEE-----EEEETTTCCEEEEEST
T ss_pred cccCCCceeecccccccCCEEEEEecCCEE-----EEEECCCCcEEEEEec
Confidence 1 1112 256788888877652 4555677888777654
No 351
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=77.16 E-value=53 Score=31.48 Aligned_cols=117 Identities=15% Similarity=0.089 Sum_probs=57.2
Q ss_pred eeceEEEeCC-CCcEEEEECC------CceEEEeCCCC-eEEEEEeecCC---ccc-cCCcceEEeCC-CCEEEEEeCCC
Q 046018 48 RPLGIRFDKK-TGDLYIADAY------LGFQVVGPEGG-LATQLVTEAAG---QPL-RFTNDLDIDEH-KGVIYFTDSST 114 (310)
Q Consensus 48 ~p~gl~~d~~-~g~l~v~~~~------~gi~~~d~~~~-~~~~~~~~~~~---~~~-~~~~~i~~d~~-g~~l~v~~~~~ 114 (310)
....|++++. .+.+|++... .+|++- .+.+ ..+.+...... .+. .....|+++|. .+++|+...
T Consensus 65 ~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S-~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~-- 141 (789)
T 1sqj_A 65 GTESIALDPNNPDRLYLAQGRYVGDEWAAFYVS-EDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTR-- 141 (789)
T ss_dssp SEEEEEEETTEEEEEEEEECSCTTSSCCEEEEE-SSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECS--
T ss_pred ceeEEEECCCCCCEEEEEeCccCCCcccEEEEE-CCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEec--
Confidence 4668889873 3578998643 345554 4444 33433211110 011 12356888874 334887652
Q ss_pred chhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCC------cccceEEEec-CCCeEEEEecCCceEEEEEccCC
Q 046018 115 SFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGL------AFANGVALSR-DRTFILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 115 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~------~~~~gi~~~~-d~~~lyv~~~~~~~i~~~~~~~~ 184 (310)
.+.|++=+=.+...+.+.... .....|+++| +.+.+|++......|++ ..+++
T Consensus 142 ----------------~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~-S~DgG 201 (789)
T 1sqj_A 142 ----------------TEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYV-THDGG 201 (789)
T ss_dssp ----------------SSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEE-ESSTT
T ss_pred ----------------cCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEE-EcCCC
Confidence 234554322223344433210 1224567776 34568887443256655 34543
No 352
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=68.39 E-value=57 Score=31.10 Aligned_cols=156 Identities=15% Similarity=0.119 Sum_probs=80.9
Q ss_pred cceeceEEEeCCC-CcEEEEECCCceEEEeCCCCeEEEEEeec-----C--CccccCCcceEEeCC--CCEEEEEeCCCc
Q 046018 46 CGRPLGIRFDKKT-GDLYIADAYLGFQVVGPEGGLATQLVTEA-----A--GQPLRFTNDLDIDEH--KGVIYFTDSSTS 115 (310)
Q Consensus 46 ~~~p~gl~~d~~~-g~l~v~~~~~gi~~~d~~~~~~~~~~~~~-----~--~~~~~~~~~i~~d~~--g~~l~v~~~~~~ 115 (310)
.++..+|++++.+ +.+|++....+|++-+-.+...+.+.... . ......+..|+++|. +. +|++...
T Consensus 20 ~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~-~~~~~g~-- 96 (763)
T 3a0f_A 20 GGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDR-LYLAQGD-- 96 (763)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTC-EEEEECS--
T ss_pred CCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCE-EEEEecc--
Confidence 3678899999844 46888887778888765555555443211 0 002234677888873 55 9987631
Q ss_pred hhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCCc-------cc--ceEEEecC-CCeEEEEecCCceEEEEEccCCC
Q 046018 116 FQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGLA-------FA--NGVALSRD-RTFILIAETSNCRILRFWLHGPN 185 (310)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~-------~~--~gi~~~~d-~~~lyv~~~~~~~i~~~~~~~~~ 185 (310)
+.. ....+.|++=+=.+...+.+..... .. ..|+++|. .+.+|++. ..+.|++= .|++.
T Consensus 97 ~~~---------~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~-~~~~l~~S-~DgG~ 165 (763)
T 3a0f_A 97 YVQ---------WDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS-RTQGLWRS-TDRAQ 165 (763)
T ss_dssp CTT---------TCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC-SSSCEEEE-SSTTS
T ss_pred ccc---------CCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe-CCCcEEEE-CCCCc
Confidence 000 0013456554322334554432211 11 35888875 35577763 34566643 44432
Q ss_pred CCcceeeeeCCC------CCCeeEECCC--CCEEEEEecC
Q 046018 186 SGKQDVFAELPG------FPDNVRSNSN--GEFWVALHAK 217 (310)
Q Consensus 186 ~~~~~~~~~~~~------~p~~i~~d~~--G~l~va~~~~ 217 (310)
. .+.+..++. ....|++|+. +.+|++...+
T Consensus 166 T--W~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 166 T--WSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp S--CEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred C--ccccccCcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 2 222211111 1234567654 3688876654
No 353
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=65.44 E-value=92 Score=29.34 Aligned_cols=103 Identities=9% Similarity=0.019 Sum_probs=49.9
Q ss_pred CCceEEEeCCCCeEEEEEeecCCccccCCcceEEeCC--CCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeE
Q 046018 67 YLGFQVVGPEGGLATQLVTEAAGQPLRFTNDLDIDEH--KGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEV 144 (310)
Q Consensus 67 ~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i~~d~~--g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 144 (310)
..+|++-+=.+...+.+........+.....|+++|. ++ +|++.....+ ...+.|++=+=.+..+
T Consensus 64 ~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~-vyvag~~~~~------------~~~g~v~rS~DgG~TW 130 (685)
T 3f6k_A 64 QSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGK-VVLTAEVSGG------------SRGGRIFRSSDFAKNF 130 (685)
T ss_dssp EEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCC-EEEEECCCTT------------CSSCEEEEESSTTSSC
T ss_pred CCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCE-EEEEEeccCC------------CCCceEEEECCCCcee
Confidence 3456665444444444432211111223467999984 35 8887642110 1245566654333345
Q ss_pred EEEecCCcccceEEEecCC-CeEEEEecCCceEEEEEccCC
Q 046018 145 TILLQGLAFANGVALSRDR-TFILIAETSNCRILRFWLHGP 184 (310)
Q Consensus 145 ~~~~~~~~~~~gi~~~~d~-~~lyv~~~~~~~i~~~~~~~~ 184 (310)
+.+.........|+++|.. +.||++ ...+.|++= .+++
T Consensus 131 ~~~~~p~~~~~~l~~~P~~~~~l~a~-~~~~gly~S-~DgG 169 (685)
T 3f6k_A 131 VQTDLPFHPLTQMMYSPQNSDYLLAL-STENGLWVS-KNFG 169 (685)
T ss_dssp EEEECSSCBSSCCEEETTEEEEEEEE-BTTCCEEEE-SSTT
T ss_pred EeccCCCCCceEEEEecCCCCEEEEE-ECCCCEEEE-eCCC
Confidence 5543222222368888853 445655 345677663 4443
No 354
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=64.35 E-value=69 Score=30.34 Aligned_cols=58 Identities=19% Similarity=0.265 Sum_probs=40.5
Q ss_pred CCcceEEeCC--CCEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCCCCeEEEEecCC-------cccceEEEec-CC
Q 046018 94 FTNDLDIDEH--KGVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKTTKEVTILLQGL-------AFANGVALSR-DR 163 (310)
Q Consensus 94 ~~~~i~~d~~--g~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~-------~~~~gi~~~~-d~ 163 (310)
++.+|+++|. +. +|+... .+.|++.+-.+...+.+.... .....|+++| +.
T Consensus 24 ~i~~i~~~p~~~~~-~~~~~~------------------~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~ 84 (737)
T 2cn3_A 24 FMPGIVFNETEKDL-IYARAA------------------IGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDP 84 (737)
T ss_dssp CCCEEEECSSSTTC-EEEECS------------------SSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSST
T ss_pred eeeEEEECCCCCCE-EEEEec------------------CCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCC
Confidence 6789999986 66 998762 467999886666777754322 2245788988 44
Q ss_pred CeEEEEe
Q 046018 164 TFILIAE 170 (310)
Q Consensus 164 ~~lyv~~ 170 (310)
+.+|++.
T Consensus 85 ~~v~v~~ 91 (737)
T 2cn3_A 85 NRVYIVA 91 (737)
T ss_dssp TCEEEEE
T ss_pred CEEEEEe
Confidence 5688874
No 355
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=53.38 E-value=80 Score=30.08 Aligned_cols=25 Identities=8% Similarity=-0.088 Sum_probs=13.0
Q ss_pred eEEEecC-CCeEEEEecCCceEEEEEc
Q 046018 156 GVALSRD-RTFILIAETSNCRILRFWL 181 (310)
Q Consensus 156 gi~~~~d-~~~lyv~~~~~~~i~~~~~ 181 (310)
.|+++|. ..+||++ +..+.|+.-++
T Consensus 735 ~i~~~p~~~~~v~~~-T~GrGi~~g~~ 760 (763)
T 3a0f_A 735 VISGDPRIYGRVYIG-MNGRGIICAQA 760 (763)
T ss_dssp EEEECTTSTTEEEEE-EBSSCEEEEES
T ss_pred eEEeCCCCCCEEEEe-CCCCeEEEEec
Confidence 4566653 2346665 44556665544
No 356
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=40.77 E-value=65 Score=27.72 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=45.0
Q ss_pred CCCeEEEEecCCc--eEEEEEccCCCCCcceeeee-CC---CCCC-eeEECCCCCEEEEEecCCccceeeeeeccccccE
Q 046018 162 DRTFILIAETSNC--RILRFWLHGPNSGKQDVFAE-LP---GFPD-NVRSNSNGEFWVALHAKKGLFGKLILLNSWLGKT 234 (310)
Q Consensus 162 d~~~lyv~~~~~~--~i~~~~~~~~~~~~~~~~~~-~~---~~p~-~i~~d~~G~l~va~~~~~~~~~~~i~~~~~~g~~ 234 (310)
+.+.||.-+...+ .|..+|++..+....-.+.. .| +.+. ++.+-.+..||+.++.... +..++..|+.
T Consensus 38 ~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~-----i~l~n~~G~~ 112 (369)
T 3s9j_A 38 GKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISR-----LSSINSQGEI 112 (369)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTE-----EEEECTTCCE
T ss_pred CcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcce-----EEEECCCceE
Confidence 3456777777777 99999998653322112221 22 2232 3556677889998876543 6667777777
Q ss_pred Eeec
Q 046018 235 LLKL 238 (310)
Q Consensus 235 ~~~~ 238 (310)
+..+
T Consensus 113 ~~k~ 116 (369)
T 3s9j_A 113 IRNY 116 (369)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 357
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=25.66 E-value=3e+02 Score=25.22 Aligned_cols=54 Identities=20% Similarity=0.313 Sum_probs=31.7
Q ss_pred ceEEEeCCCCeEEEEEeecCCccccCCcce----EEeCCC----CEEEEEeCCCchhhhhhhhhhhcCCCCceEEEEeCC
Q 046018 69 GFQVVGPEGGLATQLVTEAAGQPLRFTNDL----DIDEHK----GVIYFTDSSTSFQRRQFMSSILSGDKTGRLLKYEKT 140 (310)
Q Consensus 69 gi~~~d~~~~~~~~~~~~~~~~~~~~~~~i----~~d~~g----~~l~v~~~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 140 (310)
.|+.+|.+++.+...+... + ....++++ .+|.++ .++|++| ..|.|||+|..
T Consensus 224 ~Lyv~d~~tG~li~~i~~~-~-~~~~~~Gls~~~~~D~d~Dg~~D~~YaGD------------------l~GnlWRfDl~ 283 (570)
T 3hx6_A 224 ALLIIDMETGAITRKLEVT-G-RTGVPNGLSSPRLADNNSDGVADYAYAGD------------------LQGNLWRFDLI 283 (570)
T ss_dssp EEEEEETTTCCEEEEEEEC-C-STTSCCCEEEEEEECTTSSSBCCEEEEEE------------------TTSEEEEEECS
T ss_pred EEEEEECCCCceEEEEecC-C-CCccCCccccceEEecCCCCceeEEEEEe------------------CCCcEEEEEcC
Confidence 3899999988764433321 1 11123332 244443 2489888 37889999986
Q ss_pred CC
Q 046018 141 TK 142 (310)
Q Consensus 141 ~~ 142 (310)
+.
T Consensus 284 ~~ 285 (570)
T 3hx6_A 284 AG 285 (570)
T ss_dssp CS
T ss_pred CC
Confidence 54
Done!