BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046022
(262 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XI37|PV42A_ARATH SNF1-related protein kinase regulatory subunit gamma-like PV42a
OS=Arabidopsis thaliana GN=PV42A PE=1 SV=1
Length = 352
Score = 319 bits (817), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/242 (65%), Positives = 194/242 (80%), Gaps = 10/242 (4%)
Query: 18 ADENQRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAG 77
+ E+ L +DLT RR+VEVP+TA+L+H MN LVAN + A+PVAAPPG WIGAG
Sbjct: 6 SKEDHSRLINVTAKDLTVRNRRLVEVPYTATLSHAMNTLVANSISALPVAAPPGHWIGAG 65
Query: 78 GSMIMESDKQTGAVRKHYIGMLTMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIG 137
GSMIMESDKQTG VRKHYIG+LTMLDILAHIAG+D DLD+KMS+ VSSIIG
Sbjct: 66 GSMIMESDKQTGVVRKHYIGILTMLDILAHIAGEDS------NLSDLDRKMSSQVSSIIG 119
Query: 138 HCPEGLSLWTLSPNTSILDCMEVFSKGIHRALVPMDSRMEN---ISGVELVESASSYQML 194
HC EGLSLWTL+PNTS+L+CMEVFSKGIHRALVP++S +E+ I+GVEL+ESAS+Y+ML
Sbjct: 120 HCLEGLSLWTLNPNTSVLECMEVFSKGIHRALVPVESSIESNNTIAGVELIESASAYKML 179
Query: 195 TQMDLLRFMMN-HASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVP 253
TQMDLLRF+ + H +LK + S SI +LGA+N++V+AITE T V +AI M+ ALL+AVP
Sbjct: 180 TQMDLLRFLKDHHFDDLKTVLSRSISDLGAVNDSVYAITERTTVSNAINVMKGALLNAVP 239
Query: 254 IV 255
IV
Sbjct: 240 IV 241
>sp|Q8GXI9|PV42B_ARATH SNF1-related protein kinase regulatory subunit gamma-like PV42b
OS=Arabidopsis thaliana GN=PV42B PE=2 SV=1
Length = 357
Score = 309 bits (792), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/238 (61%), Positives = 188/238 (78%), Gaps = 7/238 (2%)
Query: 25 LREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMES 84
L + KV+DL +KRR+VEVP A+L +N +VAN+V AVPVAA PGQW+GAGGSMI+E
Sbjct: 7 LMQFKVKDLMIDKRRLVEVPDNATLGDALNTMVANRVRAVPVAAKPGQWLGAGGSMIVEL 66
Query: 85 DKQTGAVRKHYIGMLTMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLS 144
DKQ+G+ RK YIGM+TMLD++AHIAGDD +G LDKKM+APVSSIIGHCPEGLS
Sbjct: 67 DKQSGSARKQYIGMVTMLDVVAHIAGDDGESG-------LDKKMAAPVSSIIGHCPEGLS 119
Query: 145 LWTLSPNTSILDCMEVFSKGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMM 204
LW+L+PNTSI+DCME+ SKGIHR LVP+DS ENI+G ELVESAS+Y ML+QMDL+ F
Sbjct: 120 LWSLNPNTSIMDCMEMLSKGIHRVLVPLDSNTENITGPELVESASAYAMLSQMDLISFFF 179
Query: 205 NHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGATE 262
+ +S+L I SH++ +L A++ V A+T +V DAI+CM A+L+AVPIV++SG E
Sbjct: 180 DQSSQLHGILSHTVTDLSAIHNTVLALTSQARVKDAIQCMSIAMLNAVPIVEASGEGE 237
>sp|Q8GZA4|CBSX6_ARATH CBS domain-containing protein CBSX6 OS=Arabidopsis thaliana
GN=CBSX6 PE=1 SV=1
Length = 425
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 97/245 (39%), Gaps = 48/245 (19%)
Query: 30 VRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTG 89
V DLT K +VE T ++ + A+ + +PV W + + +
Sbjct: 10 VGDLTVGKPEMVEFYETETVESAIRAIGESTECGIPV------WRKRTTPSLPGFVENSE 63
Query: 90 AVRKHYIGMLTMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLS 149
++ ++G+L LDI+A +A + + +K M PVS ++ P+ L +
Sbjct: 64 MRQQRFVGILNSLDIVAFLAKTECLQE--------EKAMKIPVSEVVS--PDNTLLKQVD 113
Query: 150 PNTSILDCMEVFSKGIHRALVP-------MDSRME------------------------- 177
P T ++D +E+ +G+ R LVP M R
Sbjct: 114 PGTRLIDALEMMKQGVRRLLVPKSVVWRGMSKRFSILYNGKWLKNSENSSSSSGLSADST 173
Query: 178 NISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGALNENVFAITESTKV 237
N + S + L++ D++RF++ L + SI LG +N+N I S
Sbjct: 174 NRPTTSMTSSRDKFCCLSREDVIRFLIGVLGALAPLPLTSISTLGIINQNYNFIEASLPA 233
Query: 238 IDAIK 242
I+A +
Sbjct: 234 IEATR 238
>sp|Q0U194|SDS23_PHANO Protein SDS23 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574
/ FGSC 10173) GN=SDS23 PE=3 SV=1
Length = 536
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 145 LWTLSPNTSILDCMEVFSKGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMM 204
L TL + +EVF G+HR LV + + I +LTQ+ L++F
Sbjct: 204 LITLPHTADLTKAIEVFGSGVHRVLVAEEGTTDVIG------------VLTQLQLVKFFW 251
Query: 205 NHASELKDI---TSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIV 255
+ D+ I++L ++ V AI + A++ M + ++P++
Sbjct: 252 ENRQSFPDVDQLYPRLIKDLAIGSKTVLAINGDKPLASALELMNNEGVSSLPVL 305
>sp|Q10343|AAKG_SCHPO 5'-AMP-activated protein kinase subunit gamma
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cbs2 PE=1 SV=2
Length = 334
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 33/253 (13%)
Query: 10 ISSAGKHAADENQRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAP 69
+ K A E Q +R D+ R++ T + +++ L N +V+ P+
Sbjct: 4 VQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPL--- 60
Query: 70 PGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAHIAGDDQMNGSDDAPDDLDKKMS 129
W E++K + G+LTM D + I Q + +A ++DK
Sbjct: 61 ---WDS-------EANK--------FAGLLTMADFVNVIKYYYQSSSFPEAIAEIDKFRL 102
Query: 130 APVSSI---IGHCPEGLSLWTLSPNTSILDCMEVFSKGIHRALVPMDSRMENISGVELVE 186
+ + IG P + P S++D SK R + +D E +G E++
Sbjct: 103 LGLREVERKIGAIPP--ETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGE--TGSEMIV 158
Query: 187 SASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRA 246
S +LTQ +L+F+ + E + + N+ + TKV D IK +
Sbjct: 159 S-----VLTQYRILKFISMNCKETAMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAE 213
Query: 247 ALLHAVPIVKSSG 259
+ AVPIV S G
Sbjct: 214 KNISAVPIVNSEG 226
>sp|Q84WQ5|CBSX5_ARATH CBS domain-containing protein CBSX5 OS=Arabidopsis thaliana
GN=CBSX5 PE=2 SV=2
Length = 391
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 96 IGMLTMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSL-WTLSPNTSI 154
+G ++M D++ H++ D D + A SS+ P+ S+ + P+ S+
Sbjct: 63 LGKISMADVICHLSKDH------------DHSLCALNSSVSVLLPKTRSIVLHVQPSCSL 110
Query: 155 LDCMEVFSKGIHRALVPMDSR--------MENISGVELVES-ASSYQMLTQMDLLRFMMN 205
++ +++ KG +VP+ ++ +N+S S + +TQ D+++F++
Sbjct: 111 IEAIDLIIKGAQNLIVPIHTKPYTKKKQHNDNVSVTTTTHSNGQRFCWITQEDIIQFLLG 170
Query: 206 HASELKDITSHSIRELGALN 225
+ + + S+ +LG +N
Sbjct: 171 FIAAFSPLPAMSLSDLGVIN 190
>sp|A1CQZ4|SDS23_ASPCL Protein sds23 OS=Aspergillus clavatus (strain ATCC 1007 / CBS
513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=sds23 PE=3
SV=1
Length = 521
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 14/114 (12%)
Query: 145 LWTLSPNTSILDCMEVFSKGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMM 204
L TL + S++ +E F G+HR +V +D R + E+V + +Q L++F+
Sbjct: 203 LTTLPASASLMAAVETFGGGVHRVIV-VDERKDG----EVV------GIFSQFRLVKFLW 251
Query: 205 NHASELK---DITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIV 255
+ + +R+LG + V +I ++ + ++ M + + +V +V
Sbjct: 252 ENGRSFPVIDQLYPQYLRDLGIGSREVVSINGDKRLCEVLQLMNSEGISSVAVV 305
>sp|Q48H52|NUOCD_PSE14 NADH-quinone oxidoreductase subunit C/D OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=nuoC PE=3 SV=1
Length = 593
Score = 35.0 bits (79), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 176 MENISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSH------SIRELGALNENVF 229
M N+ V VE + ++ ++D++R MM +E ITSH I+++GA+ F
Sbjct: 276 MNNLPYVLSVEKLAGIKVPEKVDVIRIMM---AEFFRITSHLLFLGTYIQDVGAMTPVFF 332
Query: 230 AITESTKVIDAIKCMRAALLH 250
T+ K I+ + LH
Sbjct: 333 TFTDRQKAYTVIEAITGFRLH 353
>sp|Q4ZRJ1|NUOCD_PSEU2 NADH-quinone oxidoreductase subunit C/D OS=Pseudomonas syringae pv.
syringae (strain B728a) GN=nuoC PE=3 SV=1
Length = 593
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 176 MENISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSH------SIRELGALNENVF 229
M N+ V VE + ++ ++D++R MM +E ITSH I+++GA+ F
Sbjct: 276 MNNLPYVLSVEKLAGIKVPEKVDVIRIMM---AEFFRITSHLLFLGTYIQDVGAMTPVFF 332
Query: 230 AITESTKVIDAIKCMRAALLH 250
T+ K I+ + LH
Sbjct: 333 TFTDRQKAYTVIEAITGFRLH 353
>sp|Q87ZQ7|NUOCD_PSESM NADH-quinone oxidoreductase subunit C/D OS=Pseudomonas syringae pv.
tomato (strain DC3000) GN=nuoC PE=3 SV=1
Length = 593
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 176 MENISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSH------SIRELGALNENVF 229
M N+ V VE + ++ ++D++R MM +E ITSH I+++GA+ F
Sbjct: 276 MNNLPYVLSVEKLAGIKVPEKVDVIRIMM---AEFFRITSHLLFLGTYIQDVGAMTPVFF 332
Query: 230 AITESTKVIDAIKCMRAALLH 250
T+ K I+ + LH
Sbjct: 333 TFTDRQKAYTVIEAITGFRLH 353
>sp|Q3KA61|NUOCD_PSEPF NADH-quinone oxidoreductase subunit C/D OS=Pseudomonas fluorescens
(strain Pf0-1) GN=nuoC PE=3 SV=1
Length = 594
Score = 34.7 bits (78), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 176 MENISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSH------SIRELGALNENVF 229
M N+ V VE + ++ ++D++R MM +E ITSH I+++GA+ F
Sbjct: 277 MNNLPYVLSVEKLAGIKVPEKVDVIRIMM---AEFFRITSHLLFLGTYIQDVGAMTPVFF 333
Query: 230 AITESTKVIDAIKCMRAALLH 250
T+ K I+ + LH
Sbjct: 334 TFTDRQKAYTVIEAITGFRLH 354
>sp|Q9ZL18|TRXB_HELPJ Thioredoxin reductase OS=Helicobacter pylori (strain J99) GN=trxB
PE=3 SV=1
Length = 311
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 134 SIIGHCPEGLSLWTLSPNTSILDCMEVFSKGIHRALVPMDSRMENISGVELVESASSYQM 193
+IIG P GLS + + + + +F KG+ + S +EN GV+ V S +
Sbjct: 5 AIIGGGPAGLSAGLYATRGGVKNAV-LFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQ 63
Query: 194 LTQMDLLRFMMNH 206
Q RF + H
Sbjct: 64 PWQEQCFRFGLKH 76
>sp|P56431|TRXB_HELPY Thioredoxin reductase OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=trxB PE=1 SV=1
Length = 311
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 134 SIIGHCPEGLSLWTLSPNTSILDCMEVFSKGIHRALVPMDSRMENISGVELVESASSYQM 193
+IIG P GLS + + + + +F KG+ + S +EN GV+ V S +
Sbjct: 5 AIIGGGPAGLSAGLYATRGGVKNAV-LFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQ 63
Query: 194 LTQMDLLRFMMNH 206
Q RF + H
Sbjct: 64 PWQEQCFRFGLKH 76
>sp|A7FA72|SDS23_BOTFB Protein sds23 OS=Botryotinia fuckeliana (strain B05.10) GN=sds23
PE=3 SV=1
Length = 482
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 145 LWTLSPNTSILDCMEVFSKGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMM 204
L TLS + + +E+F G+HR LV + G+ L+Q+ L++F+
Sbjct: 182 LTTLSQSEDLSKAVEIFGSGVHRILV-CKPGTTTVVGI-----------LSQLKLVKFLW 229
Query: 205 NHASELKDITSHS---IRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSS 258
++ S I +R+L ++ AI + DA++ M L ++ +V ++
Sbjct: 230 DNGSSFPAIDQLYPTILRDLNIGTQHAIAINGDKLLTDALQLMSNEGLTSIAVVDNA 286
>sp|A7F3V4|SDS23_SCLS1 Protein sds23 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980
/ Ss-1) GN=sds23 PE=3 SV=1
Length = 545
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 145 LWTLSPNTSILDCMEVFSKGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMM 204
L TLS + + +E+F G+HR LV + G+ L+Q+ L++F+
Sbjct: 182 LTTLSESEDLSKAVEIFGSGVHRILV-CKPGTTTVVGI-----------LSQLKLVKFLW 229
Query: 205 NHASELKDITSHS---IRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSS 258
++ S I +R+L + AI + +A++ M L ++ +V ++
Sbjct: 230 DNGSSFPAIDQLYPTILRDLNIGAQQAIAINGDKPLTEALQLMSNEGLTSIAVVDNA 286
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,530,239
Number of Sequences: 539616
Number of extensions: 3600396
Number of successful extensions: 10923
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 10912
Number of HSP's gapped (non-prelim): 26
length of query: 262
length of database: 191,569,459
effective HSP length: 115
effective length of query: 147
effective length of database: 129,513,619
effective search space: 19038501993
effective search space used: 19038501993
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)