Query 046022
Match_columns 262
No_of_seqs 162 out of 1486
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 13:47:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046022.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046022hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 99.9 3.4E-24 1.2E-28 192.7 13.3 208 18-260 20-232 (323)
2 2v8q_E 5'-AMP-activated protei 99.9 5.2E-23 1.8E-27 185.7 16.2 206 16-260 23-235 (330)
3 2qrd_G Protein C1556.08C; AMPK 99.9 8.3E-23 2.8E-27 184.5 14.5 208 17-260 11-227 (334)
4 3kh5_A Protein MJ1225; AMPK, A 99.9 2.4E-21 8.3E-26 169.6 15.7 175 27-260 83-265 (280)
5 3kh5_A Protein MJ1225; AMPK, A 99.9 2.1E-21 7.3E-26 170.0 14.5 183 29-259 4-188 (280)
6 3ddj_A CBS domain-containing p 99.9 1.2E-21 4E-26 174.1 12.7 182 24-260 16-198 (296)
7 3ddj_A CBS domain-containing p 99.9 2.1E-21 7.1E-26 172.5 12.8 176 26-260 91-269 (296)
8 4esy_A CBS domain containing m 99.8 4.6E-21 1.6E-25 157.8 6.7 145 19-206 9-163 (170)
9 2yzq_A Putative uncharacterize 99.8 7.4E-20 2.5E-24 160.7 13.2 178 25-259 57-262 (282)
10 2yzq_A Putative uncharacterize 99.8 3.2E-20 1.1E-24 163.1 9.4 166 28-260 1-168 (282)
11 3t4n_C Nuclear protein SNF4; C 99.8 2.8E-19 9.5E-24 160.6 14.3 179 30-260 116-304 (323)
12 3k6e_A CBS domain protein; str 99.8 6.5E-19 2.2E-23 144.0 11.6 142 18-210 6-147 (156)
13 2qrd_G Protein C1556.08C; AMPK 99.8 5E-18 1.7E-22 153.0 16.7 176 31-260 110-299 (334)
14 3i8n_A Uncharacterized protein 99.8 1.6E-18 5.3E-23 136.2 10.8 127 24-205 2-129 (130)
15 3hf7_A Uncharacterized CBS-dom 99.8 3.1E-18 1E-22 135.0 10.8 126 28-206 2-128 (130)
16 3lqn_A CBS domain protein; csg 99.8 3.5E-18 1.2E-22 136.9 11.3 138 22-209 9-147 (150)
17 3fv6_A YQZB protein; CBS domai 99.8 1.2E-17 4.2E-22 135.6 14.0 142 15-207 4-146 (159)
18 3lv9_A Putative transporter; C 99.8 1.2E-17 4E-22 133.9 13.3 126 25-206 20-146 (148)
19 3lhh_A CBS domain protein; str 99.7 1.6E-17 5.3E-22 137.1 13.6 128 24-207 38-166 (172)
20 2v8q_E 5'-AMP-activated protei 99.7 3.9E-18 1.3E-22 153.7 10.1 180 30-260 120-307 (330)
21 3jtf_A Magnesium and cobalt ef 99.7 6.1E-18 2.1E-22 132.8 9.6 124 26-206 3-127 (129)
22 3oco_A Hemolysin-like protein 99.7 1.1E-17 3.9E-22 135.0 9.7 128 24-207 16-145 (153)
23 3nqr_A Magnesium and cobalt ef 99.7 3.7E-18 1.3E-22 133.5 6.6 124 27-205 2-126 (127)
24 2ef7_A Hypothetical protein ST 99.7 4.4E-17 1.5E-21 127.7 12.7 129 25-210 1-130 (133)
25 3lfr_A Putative metal ION tran 99.7 5.3E-18 1.8E-22 134.5 7.0 127 27-207 2-129 (136)
26 3ctu_A CBS domain protein; str 99.7 3.4E-17 1.2E-21 132.1 11.2 138 23-210 10-147 (156)
27 3ocm_A Putative membrane prote 99.7 4.6E-17 1.6E-21 135.1 11.2 127 24-207 32-159 (173)
28 3fhm_A Uncharacterized protein 99.7 1.5E-17 5.1E-22 135.9 7.7 132 23-207 19-152 (165)
29 3kpb_A Uncharacterized protein 99.7 6.8E-17 2.3E-21 124.6 10.5 120 28-206 1-121 (122)
30 2p9m_A Hypothetical protein MJ 99.7 1.2E-16 4E-21 125.9 11.8 128 23-206 3-137 (138)
31 2emq_A Hypothetical conserved 99.7 1.6E-16 5.5E-21 127.9 12.7 137 24-210 7-144 (157)
32 4gqw_A CBS domain-containing p 99.7 1.4E-17 4.8E-22 132.7 5.6 142 26-207 3-145 (152)
33 3k2v_A Putative D-arabinose 5- 99.7 8.7E-17 3E-21 129.0 10.3 131 16-201 17-148 (149)
34 2rc3_A CBS domain; in SITU pro 99.7 1.1E-16 3.9E-21 125.8 10.8 127 26-206 3-132 (135)
35 2yzi_A Hypothetical protein PH 99.7 2.1E-16 7.3E-21 124.5 12.1 128 24-207 3-131 (138)
36 2rih_A Conserved protein with 99.7 4.8E-16 1.6E-20 123.3 13.9 122 27-205 4-128 (141)
37 1vr9_A CBS domain protein/ACT 99.7 1.2E-16 4.2E-21 136.6 9.6 161 28-260 13-175 (213)
38 1yav_A Hypothetical protein BS 99.7 2.2E-16 7.4E-21 127.9 10.3 135 24-208 10-145 (159)
39 3sl7_A CBS domain-containing p 99.7 1E-16 3.6E-21 131.5 8.5 143 27-209 3-160 (180)
40 3oi8_A Uncharacterized protein 99.7 5.5E-17 1.9E-21 131.6 6.5 121 24-200 34-155 (156)
41 3gby_A Uncharacterized protein 99.7 1.9E-16 6.5E-21 123.7 9.3 124 26-206 3-127 (128)
42 2nyc_A Nuclear protein SNF4; b 99.7 6.1E-16 2.1E-20 122.2 11.9 131 25-206 5-142 (144)
43 1pbj_A Hypothetical protein; s 99.7 2.7E-16 9.4E-21 121.5 9.5 121 28-205 1-122 (125)
44 2j9l_A Chloride channel protei 99.7 3.5E-16 1.2E-20 129.1 10.6 144 23-207 6-167 (185)
45 2uv4_A 5'-AMP-activated protei 99.7 5.9E-16 2E-20 124.6 11.4 133 20-205 15-151 (152)
46 2o16_A Acetoin utilization pro 99.7 6.4E-16 2.2E-20 125.7 11.2 134 26-207 3-137 (160)
47 4fry_A Putative signal-transdu 99.6 3E-16 1E-20 126.6 9.0 126 28-207 7-137 (157)
48 1o50_A CBS domain-containing p 99.6 1.5E-15 5.1E-20 122.8 12.0 139 25-207 13-155 (157)
49 2pfi_A Chloride channel protei 99.6 1.8E-15 6.2E-20 122.2 10.8 138 25-207 10-149 (164)
50 1pvm_A Conserved hypothetical 99.6 1.6E-15 5.5E-20 126.0 10.7 125 27-205 8-133 (184)
51 1y5h_A Hypothetical protein RV 99.6 2.8E-16 9.5E-21 123.1 5.2 125 25-205 5-131 (133)
52 2d4z_A Chloride channel protei 99.6 7.4E-15 2.5E-19 129.3 12.5 63 25-109 10-72 (250)
53 3kxr_A Magnesium transporter, 99.6 1.7E-14 5.9E-19 122.9 11.6 130 17-207 41-176 (205)
54 3l2b_A Probable manganase-depe 99.5 1.3E-13 4.5E-18 119.4 15.8 193 27-260 6-228 (245)
55 3pc3_A CG1753, isoform A; CBS, 99.5 5E-14 1.7E-18 135.9 10.1 131 25-207 381-513 (527)
56 3k6e_A CBS domain protein; str 99.5 7E-14 2.4E-18 113.9 8.6 116 125-260 10-126 (156)
57 2oux_A Magnesium transporter; 99.5 8.2E-14 2.8E-18 124.4 9.2 128 19-207 126-261 (286)
58 4esy_A CBS domain containing m 99.5 3.6E-14 1.2E-18 116.4 5.6 109 129-257 17-144 (170)
59 2yvy_A MGTE, Mg2+ transporter 99.5 2.5E-13 8.5E-18 120.5 10.4 121 26-207 133-259 (278)
60 3lv9_A Putative transporter; C 99.4 1.5E-12 5E-17 103.9 11.6 107 129-260 22-129 (148)
61 3i8n_A Uncharacterized protein 99.4 1.2E-12 4.1E-17 102.3 9.1 108 129-260 5-113 (130)
62 2rih_A Conserved protein with 99.4 3.1E-12 1.1E-16 101.0 11.3 109 128-260 3-112 (141)
63 3hf7_A Uncharacterized CBS-dom 99.4 1E-12 3.5E-17 103.1 8.1 109 130-260 2-111 (130)
64 3lhh_A CBS domain protein; str 99.4 2.6E-12 8.8E-17 105.6 10.4 107 129-260 41-148 (172)
65 3ctu_A CBS domain protein; str 99.4 1.5E-12 5.2E-17 104.6 8.7 115 126-260 11-126 (156)
66 3org_A CMCLC; transporter, tra 99.4 8.9E-14 3E-18 137.0 1.6 139 26-205 451-625 (632)
67 3kpb_A Uncharacterized protein 99.4 2.7E-12 9.4E-17 98.5 9.4 102 131-260 2-104 (122)
68 3oco_A Hemolysin-like protein 99.4 2.1E-12 7.2E-17 103.8 8.8 108 129-260 19-127 (153)
69 3k2v_A Putative D-arabinose 5- 99.4 3.6E-12 1.2E-16 101.9 10.1 114 123-258 21-135 (149)
70 3lfr_A Putative metal ION tran 99.3 1.4E-12 4.7E-17 103.0 6.1 108 130-260 3-111 (136)
71 3lqn_A CBS domain protein; csg 99.3 4.3E-12 1.5E-16 101.1 8.9 114 127-260 12-127 (150)
72 1me8_A Inosine-5'-monophosphat 99.3 8.7E-13 3E-17 126.7 5.3 174 22-259 90-265 (503)
73 3nqr_A Magnesium and cobalt ef 99.3 1.7E-12 5.6E-17 101.1 5.8 107 130-260 3-110 (127)
74 2o16_A Acetoin utilization pro 99.3 9.3E-12 3.2E-16 100.9 10.5 109 130-259 5-118 (160)
75 3usb_A Inosine-5'-monophosphat 99.3 2E-11 7E-16 117.5 14.5 162 30-259 115-279 (511)
76 2zy9_A Mg2+ transporter MGTE; 99.3 7.4E-12 2.5E-16 119.4 11.2 120 26-206 153-278 (473)
77 4gqw_A CBS domain-containing p 99.3 3.4E-12 1.2E-16 101.2 7.3 113 130-260 5-127 (152)
78 2ef7_A Hypothetical protein ST 99.3 1.3E-11 4.4E-16 96.2 10.0 105 130-260 4-109 (133)
79 3oi8_A Uncharacterized protein 99.3 2.9E-12 9.9E-17 103.6 6.3 107 129-260 37-144 (156)
80 3fv6_A YQZB protein; CBS domai 99.3 7.5E-12 2.6E-16 101.2 8.7 106 129-259 16-124 (159)
81 3fhm_A Uncharacterized protein 99.3 1.2E-11 4.1E-16 100.6 9.9 111 128-259 22-133 (165)
82 1pvm_A Conserved hypothetical 99.3 2.2E-11 7.6E-16 100.8 11.4 110 128-260 7-117 (184)
83 3jtf_A Magnesium and cobalt ef 99.3 3.9E-12 1.3E-16 99.3 6.3 105 130-260 5-110 (129)
84 4fry_A Putative signal-transdu 99.3 7.6E-12 2.6E-16 100.6 7.6 109 129-259 6-118 (157)
85 1pbj_A Hypothetical protein; s 99.3 1.8E-11 6E-16 94.1 8.9 103 131-259 2-105 (125)
86 3gby_A Uncharacterized protein 99.3 4.1E-12 1.4E-16 98.9 4.9 106 129-260 4-110 (128)
87 3ocm_A Putative membrane prote 99.2 2.1E-11 7.2E-16 100.8 9.3 106 129-260 35-141 (173)
88 1o50_A CBS domain-containing p 99.2 2.5E-11 8.4E-16 97.8 9.4 109 130-260 16-137 (157)
89 2pfi_A Chloride channel protei 99.2 1.8E-11 6.2E-16 98.5 8.5 112 129-259 12-130 (164)
90 2emq_A Hypothetical conserved 99.2 3E-11 1E-15 96.8 9.2 112 129-260 10-123 (157)
91 2p9m_A Hypothetical protein MJ 99.2 2.9E-11 1E-15 94.6 8.6 107 129-260 7-120 (138)
92 3sl7_A CBS domain-containing p 99.2 8.7E-12 3E-16 101.9 5.7 113 130-260 4-140 (180)
93 1zfj_A Inosine monophosphate d 99.2 1.7E-10 5.8E-15 110.2 15.4 118 29-205 91-211 (491)
94 2yzi_A Hypothetical protein PH 99.2 6.8E-11 2.3E-15 92.6 10.3 107 129-260 6-113 (138)
95 2nyc_A Nuclear protein SNF4; b 99.2 4.5E-11 1.5E-15 94.0 9.3 111 127-260 5-125 (144)
96 2rc3_A CBS domain; in SITU pro 99.2 3.2E-11 1.1E-15 94.3 8.3 108 130-259 6-114 (135)
97 1y5h_A Hypothetical protein RV 99.2 2.1E-11 7.1E-16 95.0 6.2 104 130-257 8-113 (133)
98 3ghd_A A cystathionine beta-sy 99.2 1.3E-10 4.4E-15 82.5 9.2 65 39-138 1-65 (70)
99 2j9l_A Chloride channel protei 99.2 8.5E-11 2.9E-15 96.5 9.1 116 129-259 10-148 (185)
100 1yav_A Hypothetical protein BS 99.2 4.9E-11 1.7E-15 96.1 7.4 113 128-260 12-126 (159)
101 4fxs_A Inosine-5'-monophosphat 99.1 3.3E-11 1.1E-15 115.6 5.9 118 28-203 89-207 (496)
102 1vrd_A Inosine-5'-monophosphat 99.1 2.2E-11 7.7E-16 116.4 4.4 120 29-206 96-216 (494)
103 2uv4_A 5'-AMP-activated protei 99.1 2.4E-10 8.3E-15 91.4 9.0 106 130-260 23-135 (152)
104 4avf_A Inosine-5'-monophosphat 99.1 5E-11 1.7E-15 114.2 4.9 118 28-204 88-206 (490)
105 3kxr_A Magnesium transporter, 99.1 4.9E-10 1.7E-14 95.2 9.6 102 129-260 53-158 (205)
106 1vr9_A CBS domain protein/ACT 99.0 3.5E-10 1.2E-14 96.3 7.0 101 130-260 13-114 (213)
107 2d4z_A Chloride channel protei 99.0 6.4E-10 2.2E-14 97.7 8.7 62 129-206 12-74 (250)
108 2oux_A Magnesium transporter; 99.0 1.2E-09 3.9E-14 97.4 7.9 102 129-260 136-243 (286)
109 2yvy_A MGTE, Mg2+ transporter 98.9 4.2E-09 1.4E-13 93.1 9.9 102 129-260 134-241 (278)
110 1jcn_A Inosine monophosphate d 98.9 3.8E-11 1.3E-15 115.5 -4.1 123 29-204 109-232 (514)
111 3pc3_A CG1753, isoform A; CBS, 98.9 2.3E-09 8E-14 103.2 7.8 105 129-258 383-489 (527)
112 4af0_A Inosine-5'-monophosphat 98.9 2.5E-10 8.6E-15 109.2 0.0 109 39-203 147-256 (556)
113 3org_A CMCLC; transporter, tra 98.8 3.1E-09 1.1E-13 104.6 7.2 112 129-259 452-608 (632)
114 2cu0_A Inosine-5'-monophosphat 98.8 1.7E-09 5.9E-14 103.3 4.2 154 29-257 94-248 (486)
115 3fio_A A cystathionine beta-sy 98.8 4.7E-08 1.6E-12 67.7 9.1 65 39-138 1-65 (70)
116 2zy9_A Mg2+ transporter MGTE; 98.7 2.3E-08 7.9E-13 95.2 9.5 102 129-260 154-261 (473)
117 3ghd_A A cystathionine beta-sy 98.6 2.7E-08 9.2E-13 70.4 5.0 68 145-231 2-70 (70)
118 3usb_A Inosine-5'-monophosphat 98.5 9.4E-08 3.2E-12 91.9 7.3 94 145-260 123-218 (511)
119 1zfj_A Inosine monophosphate d 98.5 2.1E-07 7.1E-12 88.7 9.1 101 132-259 92-194 (491)
120 4af0_A Inosine-5'-monophosphat 98.4 2.4E-08 8.2E-13 95.6 0.0 94 145-260 148-242 (556)
121 1me8_A Inosine-5'-monophosphat 98.4 3.6E-08 1.2E-12 94.6 0.0 96 145-260 107-205 (503)
122 3l2b_A Probable manganase-depe 98.4 1.9E-07 6.3E-12 80.4 4.1 65 21-108 178-242 (245)
123 4fxs_A Inosine-5'-monophosphat 98.4 1.3E-07 4.4E-12 90.7 3.2 101 131-260 90-193 (496)
124 1vrd_A Inosine-5'-monophosphat 98.3 6E-08 2E-12 92.6 0.1 101 131-260 96-199 (494)
125 4avf_A Inosine-5'-monophosphat 98.3 1E-07 3.6E-12 91.1 -0.2 100 131-260 89-191 (490)
126 1jcn_A Inosine monophosphate d 98.2 1E-07 3.5E-12 91.5 -1.6 106 131-260 109-217 (514)
127 3fio_A A cystathionine beta-sy 98.2 2E-06 6.7E-11 59.3 4.8 67 145-230 2-69 (70)
128 2cu0_A Inosine-5'-monophosphat 98.0 6.6E-07 2.2E-11 85.4 0.0 97 132-260 95-192 (486)
129 2kok_A Arsenate reductase; bru 20.2 33 0.0011 25.4 1.0 53 18-70 44-102 (120)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.91 E-value=3.4e-24 Score=192.72 Aligned_cols=208 Identities=18% Similarity=0.242 Sum_probs=154.8
Q ss_pred hHHHHHhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEE
Q 046022 18 ADENQRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIG 97 (262)
Q Consensus 18 ~~~~~~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vG 97 (262)
.....+||.+++|+|+|..+.++++++.++|+.+|++.|.+++++++|||++++ ++++|
T Consensus 20 ~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~---------------------~~lvG 78 (323)
T 3t4n_C 20 VESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKT---------------------SRFAG 78 (323)
T ss_dssp HHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTT---------------------TEEEE
T ss_pred HHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCC---------------------CeEEE
Confidence 344568899999999999888999999999999999999999999999999752 59999
Q ss_pred EEeHHHHHHHHhCCCCCCCCCCCcchHHhhhcccccccccc---CCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecC
Q 046022 98 MLTMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGH---CPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMD 173 (262)
Q Consensus 98 ivs~~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~---~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~ 173 (262)
++|..|++.++...... . .............+.++|.. .... ++++.+++++.+|++.|. ++++++||+.+
T Consensus 79 ilt~~Dl~~~l~~~~~~--~-~~~~~l~~~~~~~v~~i~~~~~~~~~~--~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 153 (323)
T 3t4n_C 79 LLTTTDFINVIQYYFSN--P-DKFELVDKLQLDGLKDIERALGVDQLD--TASIHPSRPLFEACLKMLESRSGRIPLIDQ 153 (323)
T ss_dssp EECHHHHHHHHHHHHHC--G-GGGGGGGGCBHHHHHHHHHHTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred EEEHHHHHHHHHHHHcC--c-chhHHHHHHHHHHHHHHHHHhCCCCCC--ceEeCCCCcHHHHHHHHHhCCeeEEEEEec
Confidence 99999999877521000 0 00001111111233444310 0012 578999999999999998 79999999643
Q ss_pred CCCcccccceecccCCeeeEecHHHHHHHHHhhcccchhhhccccchhcc-cCcCeEEEeCCCcHHHHHHHHHhCCCcEE
Q 046022 174 SRMENISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGA-LNENVFAITESTKVIDAIKCMRAALLHAV 252 (262)
Q Consensus 174 ~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~-~~~~v~tv~~~~~~~~A~~lM~~~~isav 252 (262)
++.. +....+|+||++||++++..+... ......+++++++ |+++++++.+++++.+|+++|.+++++++
T Consensus 154 ~~~~--------~~~~l~Givt~~di~~~l~~~~~~-~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~ 224 (323)
T 3t4n_C 154 DEET--------HREIVVSVLTQYRILKFVALNCRE-THFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSV 224 (323)
T ss_dssp CTTT--------CCEEEEEEEEHHHHHHHHHHHCGG-GGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEE
T ss_pred CCCC--------CccceEEEecHHHHHHHHHhcCCc-hhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEE
Confidence 2210 000156999999999999876543 4455678888655 56889999999999999999999999999
Q ss_pred EEEcCCCC
Q 046022 253 PIVKSSGA 260 (262)
Q Consensus 253 ~VVd~~g~ 260 (262)
||||++|.
T Consensus 225 pVvd~~~~ 232 (323)
T 3t4n_C 225 PIIDENGY 232 (323)
T ss_dssp EEECTTCB
T ss_pred EEECCCCe
Confidence 99998774
No 2
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.90 E-value=5.2e-23 Score=185.71 Aligned_cols=206 Identities=21% Similarity=0.283 Sum_probs=159.1
Q ss_pred cchHHHHHhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeE
Q 046022 16 HAADENQRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHY 95 (262)
Q Consensus 16 ~~~~~~~~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~ 95 (262)
.+...++.||.+.+|+|+|+.+++++++++++|+.+|++.|.+++++++||++.++ +++
T Consensus 23 ~~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~---------------------~~~ 81 (330)
T 2v8q_E 23 SNSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKK---------------------QSF 81 (330)
T ss_dssp CCSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTT---------------------TEE
T ss_pred hhhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCC---------------------CeE
Confidence 34556788999999999997677899999999999999999999999999998752 589
Q ss_pred EEEEeHHHHHHHHhCCC---CCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEee
Q 046022 96 IGMLTMLDILAHIAGDD---QMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVP 171 (262)
Q Consensus 96 vGivs~~Dil~~l~~~~---~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~ 171 (262)
+|+|+..|++.++.... .....+...... +.+..+++++|.. . ++++.+++++.+|+++|. ++++++||+
T Consensus 82 vGivt~~Dll~~l~~~~~~~~~~~~~l~~~~~-~~~~~~~~~im~~---~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vv 155 (330)
T 2v8q_E 82 VGMLTITDFINILHRYYKSALVQIYELEEHKI-ETWREVYLQDSFK---P--LVCISPNASLFDAVSSLIRNKIHRLPVI 155 (330)
T ss_dssp EEEEEHHHHHHHHHHHHHHHTTTCCCGGGCBH-HHHHHHHSSSSCC---C--CCCBCTTSBHHHHHHHHHHHTCSCEEEE
T ss_pred EEEEEHHHHHHHHHHHHhccccchhHHhhccH-HHHHHHHhhcccC---C--ceEeCCCCCHHHHHHHHHHCCCCeEEEE
Confidence 99999999998765310 000000000011 1123356677862 3 578999999999999998 799999996
Q ss_pred cCCCCcccccceecccCCeeeEecHHHHHHHHHhhccc--chhhhccccchhcccC-cCeEEEeCCCcHHHHHHHHHhCC
Q 046022 172 MDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASE--LKDITSHSIRELGALN-ENVFAITESTKVIDAIKCMRAAL 248 (262)
Q Consensus 172 ~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~--l~~l~~~ti~eL~~~~-~~v~tv~~~~~~~~A~~lM~~~~ 248 (262)
+++. ++.+|+||++||++++..+.+. ...+..++++++.+++ ++++++.+++++.+|+++|.+++
T Consensus 156 -d~~~-----------~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~ 223 (330)
T 2v8q_E 156 -DPES-----------GNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHR 223 (330)
T ss_dssp -CTTT-----------CCEEEEECHHHHHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHC
T ss_pred -eCCC-----------CcEEEEEcHHHHHHHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcC
Confidence 4211 2346999999999999875432 2345567888887787 78999999999999999999999
Q ss_pred CcEEEEEcCCCC
Q 046022 249 LHAVPIVKSSGA 260 (262)
Q Consensus 249 isav~VVd~~g~ 260 (262)
++++||+|++|.
T Consensus 224 ~~~~~Vvd~~~~ 235 (330)
T 2v8q_E 224 VSALPVVDEKGR 235 (330)
T ss_dssp CSEEEEECTTSB
T ss_pred CCeEEEECCCCc
Confidence 999999997763
No 3
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.89 E-value=8.3e-23 Score=184.49 Aligned_cols=208 Identities=23% Similarity=0.274 Sum_probs=152.7
Q ss_pred chHHHHHhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEE
Q 046022 17 AADENQRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYI 96 (262)
Q Consensus 17 ~~~~~~~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~v 96 (262)
....+.+|+.+.+|+|+|+.+.+++++++++|+.+|++.|.+++++++||++.+. ++++
T Consensus 11 ~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~---------------------~~~v 69 (334)
T 2qrd_G 11 ALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEA---------------------NKFA 69 (334)
T ss_dssp HHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTT---------------------TEEE
T ss_pred HHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCC---------------------CeEE
Confidence 3445578899999999998777899999999999999999999999999998642 6899
Q ss_pred EEEeHHHHHHHHhCCCCCCCCCCCcchHHhhhcccc-------ccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCee
Q 046022 97 GMLTMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPV-------SSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRA 168 (262)
Q Consensus 97 Givs~~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V-------~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv 168 (262)
|+|+..|++.++.....-. .....+......++ +++|.. +.. ++++.+++++.++++.|. ++++++
T Consensus 70 Giv~~~Dl~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~im~~-~~~--~~~v~~~~~~~~a~~~~~~~~~~~~ 143 (334)
T 2qrd_G 70 GLLTMADFVNVIKYYYQSS---SFPEAIAEIDKFRLLGLREVERKIGAI-PPE--TIYVHPMHSLMDACLAMSKSRARRI 143 (334)
T ss_dssp EEECHHHHHHHHHHHHHHC---SCGGGGGGGGSCBHHHHHHHHHHHTCS-CSS--CCCBCTTSBHHHHHHHHHHSCCSEE
T ss_pred EEEEHHHHHHHHHHHhhcc---CCccHHHHHhhhchhhHHHHHHhhccC-CCc--eeeeCCCCcHHHHHHHHHHCCceEE
Confidence 9999999998764210000 00000000001122 334542 111 377999999999999998 799999
Q ss_pred EeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcccchhhhccccchhc-ccCcCeEEEeCCCcHHHHHHHHHhC
Q 046022 169 LVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELG-ALNENVFAITESTKVIDAIKCMRAA 247 (262)
Q Consensus 169 ~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~-~~~~~v~tv~~~~~~~~A~~lM~~~ 247 (262)
||+.+.+. + ++...+|+||++||++++..+.... .....++++++ +|+++++++++++++.+|+++|.++
T Consensus 144 ~Vvd~~~~-~-------~~~~~~Givt~~dl~~~~~~~~~~~-~~~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~ 214 (334)
T 2qrd_G 144 PLIDVDGE-T-------GSEMIVSVLTQYRILKFISMNCKET-AMLRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEK 214 (334)
T ss_dssp EEEEEETT-T-------TEEEEEEEEEHHHHHHHHHHHCGGG-GGCCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHH
T ss_pred EEEeCCCC-c-------CccceEEEeeHHHHHHHHHhhccch-hhhhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHc
Confidence 99643211 1 0011469999999999998754322 23456788865 4788999999999999999999999
Q ss_pred CCcEEEEEcCCCC
Q 046022 248 LLHAVPIVKSSGA 260 (262)
Q Consensus 248 ~isav~VVd~~g~ 260 (262)
+++++||+|++|.
T Consensus 215 ~~~~~~Vvd~~~~ 227 (334)
T 2qrd_G 215 NISAVPIVNSEGT 227 (334)
T ss_dssp TCSEEEEECTTCB
T ss_pred CCcEEEEEcCCCc
Confidence 9999999998763
No 4
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.87 E-value=2.4e-21 Score=169.61 Aligned_cols=175 Identities=15% Similarity=0.316 Sum_probs=144.4
Q ss_pred cceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHH
Q 046022 27 EAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILA 106 (262)
Q Consensus 27 ~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~ 106 (262)
+.+++++|. ++++++++++++.+|++.|.++++.++||+|++ ++++|+++..|+++
T Consensus 83 ~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----------------------~~~~Givt~~dl~~ 138 (280)
T 3kh5_A 83 NEPVREIME--ENVITLKENADIDEAIETFLTKNVGGAPIVNDE----------------------NQLISLITERDVIR 138 (280)
T ss_dssp TSBGGGTSB--CSCCCEETTCBHHHHHHHHHHTTCSEEEEECTT----------------------CBEEEEEEHHHHHH
T ss_pred hhhHHHhcC--CCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCC----------------------CEEEEEEEHHHHHH
Confidence 568999995 477899999999999999999999999999865 68999999999999
Q ss_pred HHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceec
Q 046022 107 HIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELV 185 (262)
Q Consensus 107 ~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~ 185 (262)
++..... ...+++++|.. + +.++.+++++.++++.|. ++++++||+ +++
T Consensus 139 ~~~~~~~--------------~~~~v~~~m~~---~--~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~---------- 188 (280)
T 3kh5_A 139 ALLDKID--------------ENEVIDDYITR---D--VIVATPGERLKDVARTMVRNGFRRLPVV-SEG---------- 188 (280)
T ss_dssp HHGGGSC--------------TTCBSGGGCBC---S--CCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETT----------
T ss_pred HHhhcCC--------------CCCCHHHHhCC---C--CeEECCCCcHHHHHHHHHHcCCCEEEEE-ECC----------
Confidence 8774211 12478999972 3 578999999999999998 799999997 422
Q ss_pred ccCCeeeEecHHHHHHHHHhhc-------ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCC
Q 046022 186 ESASSYQMLTQMDLLRFMMNHA-------SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSS 258 (262)
Q Consensus 186 ~~~~~~giITqsDIir~L~~~~-------~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~ 258 (262)
+.+|+||.+||++++.... +........+++++ |+++++++++++++.+|+++|.+++++++||+|++
T Consensus 189 ---~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~ 263 (280)
T 3kh5_A 189 ---RLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRMEEI--MKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDEN 263 (280)
T ss_dssp ---EEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBHHHH--SBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTT
T ss_pred ---EEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcHHHH--hcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCC
Confidence 3359999999999986432 11223356677774 88999999999999999999999999999999988
Q ss_pred CC
Q 046022 259 GA 260 (262)
Q Consensus 259 g~ 260 (262)
|.
T Consensus 264 g~ 265 (280)
T 3kh5_A 264 LR 265 (280)
T ss_dssp CB
T ss_pred Ce
Confidence 64
No 5
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.86 E-value=2.1e-21 Score=169.97 Aligned_cols=183 Identities=21% Similarity=0.400 Sum_probs=141.6
Q ss_pred eeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHHH
Q 046022 29 KVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAHI 108 (262)
Q Consensus 29 ~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~l 108 (262)
++++++. +++++++++++|+.+|+++|.++++.++||+++++ ++++|++|..||+.++
T Consensus 4 ~v~~~i~-~~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~---------------------~~~~Givt~~di~~~~ 61 (280)
T 3kh5_A 4 RVMKIAQ-NKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGN---------------------NKVVGIITSMDIVDFM 61 (280)
T ss_dssp BGGGTSC-CSCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTT---------------------CBEEEEEEHHHHHHHT
T ss_pred hHHHHhc-CCCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCC---------------------CeEEEEEEHHHHHHHh
Confidence 5566653 34789999999999999999999999999999632 6899999999999987
Q ss_pred hCCCCCCC-CCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecc
Q 046022 109 AGDDQMNG-SDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVE 186 (262)
Q Consensus 109 ~~~~~l~~-~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~ 186 (262)
........ .......+...+..+|+++|.. + +.++.+++++.+|++.|. ++++++||+ ++.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~---~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~~----------- 124 (280)
T 3kh5_A 62 GGGSKYNLIREKHERNFLAAINEPVREIMEE---N--VITLKENADIDEAIETFLTKNVGGAPIV-NDE----------- 124 (280)
T ss_dssp TTSGGGHHHHTTSTTCHHHHTTSBGGGTSBC---S--CCCEETTCBHHHHHHHHHHTTCSEEEEE-CTT-----------
T ss_pred cccchhhhhhhccccchhHHhhhhHHHhcCC---C--CEEECCCCCHHHHHHHHHhCCCCEEEEE-cCC-----------
Confidence 54211100 0001112233446799999973 3 578999999999999998 799999996 322
Q ss_pred cCCeeeEecHHHHHHHHHhhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 187 SASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 187 ~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
++.+|++|+.|+++++...... ..++++ +|+++++++++++++.+|++.|.+++++++||+ ++|
T Consensus 125 -~~~~Givt~~dl~~~~~~~~~~-----~~~v~~--~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~ 188 (280)
T 3kh5_A 125 -NQLISLITERDVIRALLDKIDE-----NEVIDD--YITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEG 188 (280)
T ss_dssp -CBEEEEEEHHHHHHHHGGGSCT-----TCBSGG--GCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETT
T ss_pred -CEEEEEEEHHHHHHHHhhcCCC-----CCCHHH--HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECC
Confidence 2346999999999998765321 236776 488899999999999999999999999999999 444
No 6
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.86 E-value=1.2e-21 Score=174.11 Aligned_cols=182 Identities=13% Similarity=0.200 Sum_probs=147.0
Q ss_pred hhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHH
Q 046022 24 LLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLD 103 (262)
Q Consensus 24 ~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~D 103 (262)
.....+|+|+|.. +++++++++|+.+|++.|.++++.++||++ + +++|++|..|
T Consensus 16 ~~~~~~V~dim~~--~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-~-----------------------~l~GivT~~D 69 (296)
T 3ddj_A 16 YFQGMNIETLMIK--NPPILSKEDRLGSAFKKINEGGIGRIIVAN-E-----------------------KIEGLLTTRD 69 (296)
T ss_dssp TTCCSSGGGTCEE--SCCEECTTSBHHHHHHHTTGGGCCEEEEES-S-----------------------SEEEEEEHHH
T ss_pred hhcccCHHHhccC--CCcEECCCccHHHHHHHHHHCCCceEEEEC-C-----------------------eEEEEEeHHH
Confidence 4567789999964 678999999999999999999999999998 3 7999999999
Q ss_pred HHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 104 ILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 104 il~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
|+.++...... ......+.+....+|+++|.. + ++++.+++++.+|+++|. ++++++||+ +++
T Consensus 70 i~~~~~~~~~~---~~~~~~~~~~~~~~v~~im~~---~--~~~v~~~~~~~~a~~~m~~~~~~~lpVv-d~~------- 133 (296)
T 3ddj_A 70 LLSTVESYCKD---SCSQGDLYHISTTPIIDYMTP---N--PVTVYNTSDEFTAINIMVTRNFGSLPVV-DIN------- 133 (296)
T ss_dssp HHGGGTTCC------CCHHHHHHHHTSBGGGTSEE---S--CCCEETTSCHHHHHHHHHHHTCSEEEEE-CTT-------
T ss_pred HHHHhcccccc---cccchhhHHHhcccHHHhccC---C--CEEEcCCCCHHHHHHHHHHcCCCEEEEE-cCC-------
Confidence 99988653211 111223334457799999973 3 578999999999999998 799999996 322
Q ss_pred eecccCCeeeEecHHHHHHHHHhhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
++.+|+||..|+++++.... ...+++++ |+++++++.+++++.+|+++|.+++++++||+|++|.
T Consensus 134 -----~~lvGivt~~dl~~~~~~~~------~~~~v~~~--m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~ 198 (296)
T 3ddj_A 134 -----DKPVGIVTEREFLLLYKDLD------EIFPVKVF--MSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNK 198 (296)
T ss_dssp -----SCEEEEEEHHHHGGGGGGSC------CCCBHHHH--SBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSC
T ss_pred -----CcEEEEEeHHHHHHhhhccc------ccccHHHh--hcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCE
Confidence 23469999999998775432 23477774 8889999999999999999999999999999998774
No 7
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.86 E-value=2.1e-21 Score=172.46 Aligned_cols=176 Identities=16% Similarity=0.222 Sum_probs=144.8
Q ss_pred hcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHH
Q 046022 26 REAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDIL 105 (262)
Q Consensus 26 ~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil 105 (262)
...+++++|.. +++++++++++.+|++.|.++++.++||+|++ ++++|+++..|++
T Consensus 91 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~----------------------~~lvGivt~~dl~ 146 (296)
T 3ddj_A 91 STTPIIDYMTP--NPVTVYNTSDEFTAINIMVTRNFGSLPVVDIN----------------------DKPVGIVTEREFL 146 (296)
T ss_dssp HTSBGGGTSEE--SCCCEETTSCHHHHHHHHHHHTCSEEEEECTT----------------------SCEEEEEEHHHHG
T ss_pred hcccHHHhccC--CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCC----------------------CcEEEEEeHHHHH
Confidence 36789999963 67899999999999999999999999999864 6899999999998
Q ss_pred HHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCccccccee
Q 046022 106 AHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVEL 184 (262)
Q Consensus 106 ~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~ 184 (262)
.++.... ...+++++|.. + +.++.+++++.+|++.|. ++++++||+ ++.
T Consensus 147 ~~~~~~~---------------~~~~v~~~m~~---~--~~~v~~~~~l~~~~~~m~~~~~~~~~Vv-d~~--------- 196 (296)
T 3ddj_A 147 LLYKDLD---------------EIFPVKVFMST---K--VQTIYKEVRLDQAVKLMLRRGFRRLPVI-DDD--------- 196 (296)
T ss_dssp GGGGGSC---------------CCCBHHHHSBC---S--CCCEETTSBHHHHHHHHHHHTCSEEEEE-CTT---------
T ss_pred Hhhhccc---------------ccccHHHhhcC---C--CeEECCCCCHHHHHHHHHHcCCCEEEEE-cCC---------
Confidence 8765321 12479999972 3 578999999999999998 799999996 322
Q ss_pred cccCCeeeEecHHHHHHHHHhhcccc--hhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 185 VESASSYQMLTQMDLLRFMMNHASEL--KDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 185 ~~~~~~~giITqsDIir~L~~~~~~l--~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
++.+|+||.+||++++......+ ......+++++ |+++++++.+++++.+|+++|.++++.++||||++|.
T Consensus 197 ---~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~--m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~ 269 (296)
T 3ddj_A 197 ---NKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDV--MVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNT 269 (296)
T ss_dssp ---SCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHH--SBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSC
T ss_pred ---CEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHH--hCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCe
Confidence 23469999999999988544322 12345677774 8899999999999999999999999999999998774
No 8
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.83 E-value=4.6e-21 Score=157.83 Aligned_cols=145 Identities=19% Similarity=0.308 Sum_probs=111.2
Q ss_pred HHHHHhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEE
Q 046022 19 DENQRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGM 98 (262)
Q Consensus 19 ~~~~~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGi 98 (262)
..+.+.+.+.+|+|+|. ++++++++++|+.+|++.|.+++++++||+|++ ++++|+
T Consensus 9 ~~~~~~l~~~~V~diM~--~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~----------------------g~lvGi 64 (170)
T 4esy_A 9 RAIARAIRQVPIRDILT--SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN----------------------GHLVGI 64 (170)
T ss_dssp HHHHHHHHTSBGGGGCC--SCCCCEETTSBHHHHHHHHHHTTCSEEEEECTT----------------------SCEEEE
T ss_pred HHHHHHHcCCCHHHhcC--CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC----------------------ccEEEE
Confidence 34567789999999995 478999999999999999999999999999875 689999
Q ss_pred EeHHHHHHHHhCCCCCC-----CCCCCcch----HHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCee
Q 046022 99 LTMLDILAHIAGDDQMN-----GSDDAPDD----LDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRA 168 (262)
Q Consensus 99 vs~~Dil~~l~~~~~l~-----~~~~~~~~----~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv 168 (262)
||..||++++....... ........ .......+++++|+. + ++++.++++|.+|+++|. +++|++
T Consensus 65 it~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~---~--~~tv~~~~~l~~a~~~m~~~~~~~l 139 (170)
T 4esy_A 65 ITESDFLRGSIPFWIYEASEILSRAIPAPEVEHLFETGRKLTASAVMTQ---P--VVTAAPEDSVGSIADQMRRHGIHRI 139 (170)
T ss_dssp EEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBC---C--SCCBCTTSBHHHHHHHHHHTTCSEE
T ss_pred EEHHHHHHHHhhccccchhhhhhhccchhhHHhhhccccccchhhhccc---C--cccCCcchhHHHHHHHHHHcCCcEE
Confidence 99999987655321000 00000000 112235789999983 3 688999999999999998 799999
Q ss_pred EeecCCCCcccccceecccCCeeeEecHHHHHHHHHhh
Q 046022 169 LVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 169 ~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~ 206 (262)
||+.+ |+++||||++||+++|...
T Consensus 140 pVvd~--------------g~lvGivt~~Dil~~l~~~ 163 (170)
T 4esy_A 140 PVVQD--------------GVPVGIVTRRDLLKLLLLE 163 (170)
T ss_dssp EEEET--------------TEEEEEEEHHHHTTTSCCC
T ss_pred EEEEC--------------CEEEEEEEHHHHHHHHHhc
Confidence 99732 1335999999999988654
No 9
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.82 E-value=7.4e-20 Score=160.74 Aligned_cols=178 Identities=16% Similarity=0.208 Sum_probs=133.5
Q ss_pred hhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHH
Q 046022 25 LREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDI 104 (262)
Q Consensus 25 l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Di 104 (262)
+.+.+++++|.. +++++++++++.+|++.|.++++..+||+|++ ++++|++|..|+
T Consensus 57 ~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~----------------------~~~~Giit~~di 112 (282)
T 2yzq_A 57 PDEEQLAMLVKR--DVPVVKENDTLKKAAKLMLEYDYRRVVVVDSK----------------------GKPVGILTVGDI 112 (282)
T ss_dssp -------CCCBS--CCCEEETTSBHHHHHHHHHHHTCSEEEEECTT----------------------SCEEEEEEHHHH
T ss_pred hccCCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC----------------------CEEEEEEEHHHH
Confidence 446789999953 56799999999999999999999999999864 589999999999
Q ss_pred HH-HHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 105 LA-HIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 105 l~-~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
+. ++.+.. .....+++++|.. + ++++.+++++.++++.|. ++++++||+ ++.
T Consensus 113 ~~~~~~~~~-------------~~~~~~v~~~m~~---~--~~~v~~~~~l~~~~~~~~~~~~~~l~Vv-d~~------- 166 (282)
T 2yzq_A 113 IRRYFAKSE-------------KYKGVEIEPYYQR---Y--VSIVWEGTPLKAALKALLLSNSMALPVV-DSE------- 166 (282)
T ss_dssp HHHTTTTCS-------------GGGGCBSTTTSBS---C--CCCEETTSBHHHHHHHHHTCSSSEEEEE-CTT-------
T ss_pred HHHHHhccC-------------CcccCcHHHHhCC---C--CEEECCCCCHHHHHHHHHHcCCcEEEEE-cCC-------
Confidence 98 665421 1124578999962 3 578999999999999998 689999996 322
Q ss_pred eecccCCeeeEecHHHHH------HHHHhh---------------c-cc----chhhhccccchhcccCcCeEEEeCCCc
Q 046022 183 ELVESASSYQMLTQMDLL------RFMMNH---------------A-SE----LKDITSHSIRELGALNENVFAITESTK 236 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIi------r~L~~~---------------~-~~----l~~l~~~ti~eL~~~~~~v~tv~~~~~ 236 (262)
++.+|+||..|++ +++..+ . .. .......++++ +|++++++++++++
T Consensus 167 -----~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--im~~~~~~v~~~~~ 239 (282)
T 2yzq_A 167 -----GNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAE--IMTRDVIVATPHMT 239 (282)
T ss_dssp -----SCEEEEEEGGGGGGCGGGCC--------------------------------CCCBGGG--TCBSSCCCBCTTSB
T ss_pred -----CeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHH--hcCCCCceeCCCCC
Confidence 2346999999999 766310 0 00 01224567777 59999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCC
Q 046022 237 VIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 237 ~~~A~~lM~~~~isav~VVd~~g 259 (262)
+.+|+++|.+++++++||||++|
T Consensus 240 l~~a~~~m~~~~~~~lpVvd~~~ 262 (282)
T 2yzq_A 240 VHEVALKMAKYSIEQLPVIRGEG 262 (282)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTT
T ss_pred HHHHHHHHHHcCcceeEEECCCC
Confidence 99999999999999999999765
No 10
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.81 E-value=3.2e-20 Score=163.09 Aligned_cols=166 Identities=18% Similarity=0.287 Sum_probs=119.4
Q ss_pred ceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHH
Q 046022 28 AKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAH 107 (262)
Q Consensus 28 ~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~ 107 (262)
++|+|+|. ++++++++++|+.+|++.|.++++.++||++++ ++++|+++..|++..
T Consensus 1 m~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~----------------------~~~~Giv~~~dl~~~ 56 (282)
T 2yzq_A 1 MRVKTIMT--QNPVTITLPATRNYALELFKKYKVRSFPVVNKE----------------------GKLVGIISVKRILVN 56 (282)
T ss_dssp CBHHHHSE--ESCCCEESSCC------------CCEEEEECTT----------------------CCEEEEEESSCC---
T ss_pred CchHHhcc--CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCC----------------------CcEEEEEEHHHHHhh
Confidence 46889996 467899999999999999999999999999864 689999999998755
Q ss_pred HhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecc
Q 046022 108 IAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVE 186 (262)
Q Consensus 108 l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~ 186 (262)
+. ..+++++|.. . +.++.+++++.+|++.|. ++.+++||+ ++.
T Consensus 57 ~~-------------------~~~v~~~m~~---~--~~~v~~~~~l~~a~~~m~~~~~~~~~Vv-d~~----------- 100 (282)
T 2yzq_A 57 PD-------------------EEQLAMLVKR---D--VPVVKENDTLKKAAKLMLEYDYRRVVVV-DSK----------- 100 (282)
T ss_dssp --------------------------CCCBS---C--CCEEETTSBHHHHHHHHHHHTCSEEEEE-CTT-----------
T ss_pred hc-------------------cCCHHHHcCC---C--CcEECCCCcHHHHHHHHHHcCCCEEEEE-cCC-----------
Confidence 32 2368899972 2 478999999999999998 799999996 322
Q ss_pred cCCeeeEecHHHHHH-HHHhhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 187 SASSYQMLTQMDLLR-FMMNHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 187 ~~~~~giITqsDIir-~L~~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
++.+|+||+.|+++ ++... . .....++++ +|+++++++.+++++.+|++.|.+++++++||+|++|.
T Consensus 101 -~~~~Giit~~di~~~~~~~~-~---~~~~~~v~~--~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~ 168 (282)
T 2yzq_A 101 -GKPVGILTVGDIIRRYFAKS-E---KYKGVEIEP--YYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGN 168 (282)
T ss_dssp -SCEEEEEEHHHHHHHTTTTC-S---GGGGCBSTT--TSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSC
T ss_pred -CEEEEEEEHHHHHHHHHhcc-C---CcccCcHHH--HhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCe
Confidence 23469999999999 77653 1 112456776 48889999999999999999999999999999997763
No 11
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.81 E-value=2.8e-19 Score=160.59 Aligned_cols=179 Identities=15% Similarity=0.232 Sum_probs=137.6
Q ss_pred eccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHHHh
Q 046022 30 VRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAHIA 109 (262)
Q Consensus 30 v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~l~ 109 (262)
+.++| .++++++++++++.+|++.|.++++.++||++..+. + .+.+++|++|..|++.++.
T Consensus 116 ~~~~~--~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~---------------~--~~~~l~Givt~~di~~~l~ 176 (323)
T 3t4n_C 116 ALGVD--QLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEE---------------T--HREIVVSVLTQYRILKFVA 176 (323)
T ss_dssp HTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTT---------------T--CCEEEEEEEEHHHHHHHHH
T ss_pred HhCCC--CCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCC---------------C--CccceEEEecHHHHHHHHH
Confidence 34445 357889999999999999999999999999986520 0 0124999999999999887
Q ss_pred CCCCCCCCCCCcchHHhhhccccccc---cccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceec
Q 046022 110 GDDQMNGSDDAPDDLDKKMSAPVSSI---IGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELV 185 (262)
Q Consensus 110 ~~~~l~~~~~~~~~~~~~~~~~V~~i---m~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~ 185 (262)
.... .......+|+++ |.. + ++++.+++++.+|+++|. ++++++||+ +++
T Consensus 177 ~~~~----------~~~~~~~~v~~~~~~m~~---~--~~~v~~~~~~~~~~~~m~~~~~~~~pVv-d~~---------- 230 (323)
T 3t4n_C 177 LNCR----------ETHFLKIPIGDLNIITQD---N--MKSCQMTTPVIDVIQMLTQGRVSSVPII-DEN---------- 230 (323)
T ss_dssp HHCG----------GGGGCCSBGGGTTCSBCT---T--CCCBCTTSBHHHHHHHHHHHTCSEEEEE-CTT----------
T ss_pred hcCC----------chhhhhCcHHHcCCCCCC---C--cEEECCCCcHHHHHHHHHHcCCCEEEEE-CCC----------
Confidence 4210 123446689999 752 3 678999999999999998 799999996 322
Q ss_pred ccCCeeeEecHHHHHHHHHhhcccchhhhccccchhcccCc------CeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 186 ESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGALNE------NVFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 186 ~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~~~~------~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
++.+|+||.+||++++..... .....+++++ |++ +++++++++++.+|+++|.++++.++||||++|
T Consensus 231 --~~~~Giit~~dl~~~~~~~~~---~~~~~~v~~~--m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~ 303 (323)
T 3t4n_C 231 --GYLINVYEAYDVLGLIKGGIY---NDLSLSVGEA--LMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVG 303 (323)
T ss_dssp --CBEEEEEETTHHHHHHHTTHH---HHTTSBHHHH--GGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTS
T ss_pred --CeEEEEEeHHHHHHHHhhchh---hhccCCHHHH--HhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCC
Confidence 234699999999999876431 1224567774 776 799999999999999999999999999999877
Q ss_pred C
Q 046022 260 A 260 (262)
Q Consensus 260 ~ 260 (262)
.
T Consensus 304 ~ 304 (323)
T 3t4n_C 304 R 304 (323)
T ss_dssp B
T ss_pred c
Confidence 4
No 12
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.79 E-value=6.5e-19 Score=143.96 Aligned_cols=142 Identities=15% Similarity=0.213 Sum_probs=111.7
Q ss_pred hHHHHHhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEE
Q 046022 18 ADENQRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIG 97 (262)
Q Consensus 18 ~~~~~~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vG 97 (262)
..+++.|+.. +++++|++..+++++++++|+.+|+++|.+++++++||+|.+ ++++|
T Consensus 6 ~~~~e~~l~~-~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~----------------------~~lvG 62 (156)
T 3k6e_A 6 AKEFETFLLG-QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE----------------------KQFVG 62 (156)
T ss_dssp HHHHHHHHHT-TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-----------------------CBEEE
T ss_pred HHHHHHHhhc-cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCC----------------------CcEEE
Confidence 3455666654 799999887899999999999999999999999999999864 68999
Q ss_pred EEeHHHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHhcCCCeeEeecCCCCc
Q 046022 98 MLTMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFSKGIHRALVPMDSRME 177 (262)
Q Consensus 98 ivs~~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~~g~~rv~V~~~~~~~ 177 (262)
+||..|++.++..... ........+|+++|.. + +.++.+++++.+|+++|.+. +.+||+ ++.
T Consensus 63 iit~~Di~~~~~~~~~---------~~~~~~~~~v~~im~~---~--~~~v~~~~~l~~~~~~m~~~-~~lpVV-d~~-- 124 (156)
T 3k6e_A 63 TIGLRDIMAYQMEHDL---------SQEIMADTDIVHMTKT---D--VAVVSPDFTITEVLHKLVDE-SFLPVV-DAE-- 124 (156)
T ss_dssp EEEHHHHHHHHHHHTC---------CHHHHTTSBGGGTCBC---S--CCCBCTTCCHHHHHHHTTTS-SEEEEE-CTT--
T ss_pred EEEecchhhhhhhccc---------ccccccccCHHHhhcC---C--ceecccccHHHHHHHHHHHc-CCeEEE-ecC--
Confidence 9999999998875211 1223446799999973 3 57899999999999999842 458885 422
Q ss_pred ccccceecccCCeeeEecHHHHHHHHHhhcccc
Q 046022 178 NISGVELVESASSYQMLTQMDLLRFMMNHASEL 210 (262)
Q Consensus 178 ~~~g~~~~~~~~~~giITqsDIir~L~~~~~~l 210 (262)
|+.+||||++||++.+....+.+
T Consensus 125 ----------g~l~GiiT~~Dil~~~~~~~~~~ 147 (156)
T 3k6e_A 125 ----------GIFQGIITRKSILKAVNALLHDF 147 (156)
T ss_dssp ----------SBEEEEEEHHHHHHHHHHHSCC-
T ss_pred ----------CEEEEEEEHHHHHHHHHHHhccc
Confidence 34469999999999997655443
No 13
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.78 E-value=5e-18 Score=153.05 Aligned_cols=176 Identities=16% Similarity=0.251 Sum_probs=136.4
Q ss_pred ccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCe----EEEEEeHHHHHH
Q 046022 31 RDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKH----YIGMLTMLDILA 106 (262)
Q Consensus 31 ~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~----~vGivs~~Dil~ 106 (262)
+++|..+.+++++++++|+.+|++.|.++++..+||+++.+ ++ ++|+++..||+.
T Consensus 110 ~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~---------------------~~~~~~~~Givt~~dl~~ 168 (334)
T 2qrd_G 110 RKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDG---------------------ETGSEMIVSVLTQYRILK 168 (334)
T ss_dssp HHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEET---------------------TTTEEEEEEEEEHHHHHH
T ss_pred HhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCC---------------------CcCccceEEEeeHHHHHH
Confidence 34565444458999999999999999999999999998642 23 999999999999
Q ss_pred HHhCCCCCCCCCCCcchHHhhhccccccc---cccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 107 HIAGDDQMNGSDDAPDDLDKKMSAPVSSI---IGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 107 ~l~~~~~l~~~~~~~~~~~~~~~~~V~~i---m~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
++..... . ......+++++ |.. + +.++.+++++.+|++.|. ++++++||+ ++.
T Consensus 169 ~~~~~~~---------~-~~~~~~~v~~l~~~m~~---~--~~~v~~~~~~~~~~~~m~~~~~~~~~Vv-d~~------- 225 (334)
T 2qrd_G 169 FISMNCK---------E-TAMLRVPLNQMTIGTWS---N--LATASMETKVYDVIKMLAEKNISAVPIV-NSE------- 225 (334)
T ss_dssp HHHHHCG---------G-GGGCCCBGGGSSCSBCS---S--CCCBCTTSBHHHHHHHHHHHTCSEEEEE-CTT-------
T ss_pred HHHhhcc---------c-hhhhhCcHHHhCCcccC---C--ceEECCCCcHHHHHHHHHHcCCcEEEEE-cCC-------
Confidence 8864110 0 12235678885 652 3 578999999999999998 689999996 322
Q ss_pred eecccCCeeeEecHHHHHHHHHhhcccchhhhccccchhcccC------cCeEEEeCCCcHHHHHHHHHhCCCcEEEEEc
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGALN------ENVFAITESTKVIDAIKCMRAALLHAVPIVK 256 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~~~------~~v~tv~~~~~~~~A~~lM~~~~isav~VVd 256 (262)
++.+|+||..||++++..... .....+++++ |+ ++++++.+++++.+|+++|.++++..+||||
T Consensus 226 -----~~~~Giit~~dl~~~~~~~~~---~~~~~~v~~~--m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 295 (334)
T 2qrd_G 226 -----GTLLNVYESVDVMHLIQDGDY---SNLDLSVGEA--LLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVD 295 (334)
T ss_dssp -----CBEEEEEETHHHHHHHTTSCG---GGGGSBHHHH--HTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEEC
T ss_pred -----CcEEEEEEHHHHHHHhhcccc---ccccCcHHHH--HhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 234699999999998865321 1124566664 66 3899999999999999999999999999999
Q ss_pred CCCC
Q 046022 257 SSGA 260 (262)
Q Consensus 257 ~~g~ 260 (262)
++|.
T Consensus 296 ~~g~ 299 (334)
T 2qrd_G 296 ENLK 299 (334)
T ss_dssp TTCB
T ss_pred CCCe
Confidence 8763
No 14
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.77 E-value=1.6e-18 Score=136.24 Aligned_cols=127 Identities=12% Similarity=0.194 Sum_probs=102.6
Q ss_pred hhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHH
Q 046022 24 LLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLD 103 (262)
Q Consensus 24 ~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~D 103 (262)
.|.+.+|+|+|...++++++++++|+.+|++.|.++++.++||++.+. ++++|+|+..|
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~---------------------~~~~Givt~~d 60 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQK---------------------DNIIGFVHRLE 60 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSST---------------------TCEEEECCHHH
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCC---------------------CcEEEEEEHHH
Confidence 367889999997667788999999999999999999999999998641 58999999999
Q ss_pred HHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 104 ILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 104 il~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
++.++.... ...+++++|. . +.++.+++++.+|++.|. ++++++||+ ++.
T Consensus 61 l~~~~~~~~---------------~~~~v~~~m~-~-----~~~v~~~~~l~~~~~~m~~~~~~~~~Vv-d~~------- 111 (130)
T 3i8n_A 61 LFKMQQSGS---------------GQKQLGAVMR-P-----IQVVLNNTALPKVFDQMMTHRLQLALVV-DEY------- 111 (130)
T ss_dssp HHHHHHTTT---------------TTSBHHHHSE-E-----CCEEETTSCHHHHHHHHHHHTCCEEEEE-CTT-------
T ss_pred HHHHHhcCC---------------CcCCHHHHhc-C-----CcCcCCCCcHHHHHHHHHHcCCeEEEEE-cCC-------
Confidence 999877521 1347899995 1 468999999999999998 799999996 322
Q ss_pred eecccCCeeeEecHHHHHHHHHh
Q 046022 183 ELVESASSYQMLTQMDLLRFMMN 205 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~ 205 (262)
|+.+|+||++||++++..
T Consensus 112 -----g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 112 -----GTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp -----SCEEEEEEHHHHHHHHHT
T ss_pred -----CCEEEEEEHHHHHHHHcC
Confidence 244699999999999864
No 15
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.76 E-value=3.1e-18 Score=134.99 Aligned_cols=126 Identities=13% Similarity=0.154 Sum_probs=102.6
Q ss_pred ceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHH
Q 046022 28 AKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAH 107 (262)
Q Consensus 28 ~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~ 107 (262)
.+|+|+|...++++++++++|+.+|++.|.++++.++||++.+. ++++|+|+..|++++
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~---------------------~~lvGivt~~dl~~~ 60 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSL---------------------DDAISMLRVREAYRL 60 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSG---------------------GGEEEEEEHHHHHHH
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCC---------------------CcEEEEEEHHHHHHH
Confidence 57999997556789999999999999999999999999997531 689999999999998
Q ss_pred HhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecc
Q 046022 108 IAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVE 186 (262)
Q Consensus 108 l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~ 186 (262)
+.....+ ...++.++|. + +.++.+++++.+|+++|. ++++++||+ ++.
T Consensus 61 ~~~~~~~-------------~~~~v~~~m~----~--~~~v~~~~~l~~~~~~m~~~~~~~~~Vv-d~~----------- 109 (130)
T 3hf7_A 61 MTEKKEF-------------TKEIMLRAAD----E--IYFVPEGTPLSTQLVKFQRNKKKVGLVV-DEY----------- 109 (130)
T ss_dssp HTSSSCC-------------CHHHHHHHSB----C--CCEEETTCBHHHHHHHHHHHCCCEEEEE-CTT-----------
T ss_pred HhccCcc-------------chhhHHHhcc----C--CeEeCCCCcHHHHHHHHHhcCCeEEEEE-cCC-----------
Confidence 8753211 1236888884 2 468999999999999998 799999996 322
Q ss_pred cCCeeeEecHHHHHHHHHhh
Q 046022 187 SASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 187 ~~~~~giITqsDIir~L~~~ 206 (262)
|+.+||||.+||++.+...
T Consensus 110 -g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 110 -GDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp -SCEEEEEEHHHHHHHHHC-
T ss_pred -CCEEEEeeHHHHHHHHhCC
Confidence 2346999999999998753
No 16
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.76 E-value=3.5e-18 Score=136.91 Aligned_cols=138 Identities=17% Similarity=0.279 Sum_probs=110.0
Q ss_pred HHhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeH
Q 046022 22 QRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTM 101 (262)
Q Consensus 22 ~~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~ 101 (262)
...|.+++|+|+|..+.+++++++++|+.+|++.|.++++.++||+|++ ++++|+|+.
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~----------------------~~~~Givt~ 66 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPM----------------------YKLHGLIST 66 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTT----------------------CBEEEEEEH
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCC----------------------CCEEEEEEH
Confidence 4567899999999754568899999999999999999999999999865 689999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccc
Q 046022 102 LDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENIS 180 (262)
Q Consensus 102 ~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~ 180 (262)
.||+.++.....+ ........+|+++|.. + +.++.+++++.+|+++|. +++ +||+ +++
T Consensus 67 ~dl~~~~~~~~~~--------~~~~~~~~~v~~~m~~---~--~~~v~~~~~l~~a~~~~~~~~~--l~Vv-d~~----- 125 (150)
T 3lqn_A 67 AMILDGILGLERI--------EFERLEEMKVEQVMKQ---D--IPVLKLEDSFAKALEMTIDHPF--ICAV-NED----- 125 (150)
T ss_dssp HHHHHHTBCSSSB--------CGGGGGGCBGGGTCBS---S--CCEEETTCBHHHHHHHHHHCSE--EEEE-CTT-----
T ss_pred HHHHHHHHhhccc--------chhHHhcCCHHHHhcC---C--CceeCCCCCHHHHHHHHHhCCE--EEEE-CCC-----
Confidence 9999988753221 1223346789999972 3 578999999999999998 554 8886 422
Q ss_pred cceecccCCeeeEecHHHHHHHHHhhccc
Q 046022 181 GVELVESASSYQMLTQMDLLRFMMNHASE 209 (262)
Q Consensus 181 g~~~~~~~~~~giITqsDIir~L~~~~~~ 209 (262)
|+.+|+||++||++++.+....
T Consensus 126 -------g~~~Giit~~dil~~l~~~~~~ 147 (150)
T 3lqn_A 126 -------GYFEGILTRRAILKLLNKKVRQ 147 (150)
T ss_dssp -------CBEEEEEEHHHHHHHHHHHC--
T ss_pred -------CcEEEEEEHHHHHHHHHHHhHh
Confidence 2446999999999999887643
No 17
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.75 E-value=1.2e-17 Score=135.62 Aligned_cols=142 Identities=16% Similarity=0.208 Sum_probs=112.3
Q ss_pred CcchHHHHHhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCe
Q 046022 15 KHAADENQRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKH 94 (262)
Q Consensus 15 ~~~~~~~~~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~ 94 (262)
+.....+++.|..++|+|+|. ++ +++++++|+.+|++.|.++++.++||+|++ ++
T Consensus 4 ~~~~~~l~~~l~~~~v~~im~--~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~----------------------~~ 58 (159)
T 3fv6_A 4 KTGTQLLADKLKKLQVKDFQS--IP-VVIHENVSVYDAICTMFLEDVGTLFVVDRD----------------------AV 58 (159)
T ss_dssp ---CHHHHHHHTTCBGGGSCB--CC-CEEETTSBHHHHHHHHHHHTCSEEEEECTT----------------------SC
T ss_pred CchHHHHHHHHhhCCHHHHcC--CC-EEECCCCcHHHHHHHHHHCCCCEEEEEcCC----------------------Cc
Confidence 445567788999999999995 34 499999999999999999999999999864 68
Q ss_pred EEEEEeHHHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecC
Q 046022 95 YIGMLTMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMD 173 (262)
Q Consensus 95 ~vGivs~~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~ 173 (262)
++|+|+..||+.++..... ....+|.++|.. ..+ ++++.+++++.+|+++|. ++++++||+.+
T Consensus 59 ~~Givt~~dl~~~~~~~~~-------------~~~~~v~~~m~~-~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 122 (159)
T 3fv6_A 59 LVGVLSRKDLLRASIGQQE-------------LTSVPVHIIMTR-MPN--ITVCRREDYVMDIAKHLIEKQIDALPVIKD 122 (159)
T ss_dssp EEEEEEHHHHHHHHTSCSC-------------TTTCBGGGTSEE-TTS--CCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred EEEEEeHHHHHHHhhccCc-------------ccCcCHHHHHcC-CCC--cEEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 9999999999998865321 124589999973 112 578999999999999998 79999999643
Q ss_pred CCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 174 SRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 174 ~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
++.. .+.+|+||++||++++.+-.
T Consensus 123 ~g~~----------~~~vGiit~~dil~~l~~~~ 146 (159)
T 3fv6_A 123 TDKG----------FEVIGRVTKTNMTKILVSLS 146 (159)
T ss_dssp CSSS----------EEEEEEEEHHHHHHHHHHHH
T ss_pred CCcc----------eeEEEEEEHHHHHHHHHHHh
Confidence 2100 03469999999999998754
No 18
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.75 E-value=1.2e-17 Score=133.89 Aligned_cols=126 Identities=17% Similarity=0.297 Sum_probs=105.8
Q ss_pred hhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHH
Q 046022 25 LREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDI 104 (262)
Q Consensus 25 l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Di 104 (262)
+.+.+|+|+|....+++++++++|+.+|++.|.++++.++||++.+. ++++|+|+..|+
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~---------------------~~lvGivt~~dl 78 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNK---------------------DDILGFVHIRDL 78 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSST---------------------TSEEEEEEHHHH
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCC---------------------CcEEEEEEHHHH
Confidence 57889999997545788999999999999999999999999998641 589999999999
Q ss_pred HHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccce
Q 046022 105 LAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVE 183 (262)
Q Consensus 105 l~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~ 183 (262)
+.++.... ..+++++|. + +.++.+++++.+|+++|. ++++++||+ ++.
T Consensus 79 ~~~~~~~~----------------~~~v~~~m~----~--~~~v~~~~~l~~~~~~m~~~~~~~l~Vv-d~~-------- 127 (148)
T 3lv9_A 79 YNQKINEN----------------KIELEEILR----D--IIYISENLTIDKALERIRKEKLQLAIVV-DEY-------- 127 (148)
T ss_dssp HHHHHHHS----------------CCCGGGTCB----C--CEEEETTSBHHHHHHHHHHHTCSEEEEE-CTT--------
T ss_pred HHHHhcCC----------------CccHHHhcC----C--CeEECCCCCHHHHHHHHHhcCCeEEEEE-eCC--------
Confidence 98876411 457999993 2 578999999999999998 799999996 422
Q ss_pred ecccCCeeeEecHHHHHHHHHhh
Q 046022 184 LVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 184 ~~~~~~~~giITqsDIir~L~~~ 206 (262)
|+.+|+||++||++++...
T Consensus 128 ----g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 128 ----GGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp ----SSEEEEEEHHHHHHHHHHT
T ss_pred ----CCEEEEEEHHHHHHHHhCc
Confidence 2446999999999998764
No 19
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.75 E-value=1.6e-17 Score=137.13 Aligned_cols=128 Identities=14% Similarity=0.220 Sum_probs=104.1
Q ss_pred hhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHH
Q 046022 24 LLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLD 103 (262)
Q Consensus 24 ~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~D 103 (262)
.+...+|+|+|...++++++++++|+.+|++.|.++++.++||++.+. ++++|+|+..|
T Consensus 38 ~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~---------------------~~lvGivt~~d 96 (172)
T 3lhh_A 38 RLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNV---------------------DDMVGIISAKQ 96 (172)
T ss_dssp -----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSST---------------------TSEEEEEEHHH
T ss_pred ccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCC---------------------CeEEEEEEHHH
Confidence 356789999997556789999999999999999999999999998641 58999999999
Q ss_pred HHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 104 ILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 104 il~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
++.++.... ..+|+++|. + +.++.+++++.+|+++|. ++++++||+ ++.
T Consensus 97 l~~~~~~~~----------------~~~v~~im~----~--~~~v~~~~~l~~a~~~m~~~~~~~~pVv-d~~------- 146 (172)
T 3lhh_A 97 LLSESIAGE----------------RLELVDLVK----N--CNFVPNSLSGMELLEHFRTTGSQMVFVV-DEY------- 146 (172)
T ss_dssp HHHHHHTTC----------------CCCGGGGCB----C--CEEEETTCCHHHHHHHHHHHTCSEEEEE-CTT-------
T ss_pred HHHHHhhcC----------------cccHHHHhc----C--CeEeCCCCCHHHHHHHHHHcCCeEEEEE-eCC-------
Confidence 999877421 347999993 2 588999999999999998 799999996 422
Q ss_pred eecccCCeeeEecHHHHHHHHHhhc
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
|+.+||||++||++++...+
T Consensus 147 -----g~lvGiit~~Dil~~l~~~~ 166 (172)
T 3lhh_A 147 -----GDLKGLVTLQDMMDALTGEF 166 (172)
T ss_dssp -----SCEEEEEEHHHHHHHHHTTC
T ss_pred -----CCEEEEeeHHHHHHHHhCCC
Confidence 24469999999999998754
No 20
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.74 E-value=3.9e-18 Score=153.72 Aligned_cols=180 Identities=16% Similarity=0.175 Sum_probs=136.1
Q ss_pred eccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecC-CCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHHH
Q 046022 30 VRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAP-PGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAHI 108 (262)
Q Consensus 30 v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~-~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~l 108 (262)
++++|. ++++++++++++.+|++.|.++++..+||+|+ . ++++|+||..|++.++
T Consensus 120 ~~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~----------------------~~~~Givt~~dl~~~~ 175 (330)
T 2v8q_E 120 YLQDSF--KPLVCISPNASLFDAVSSLIRNKIHRLPVIDPES----------------------GNTLYILTHKRILKFL 175 (330)
T ss_dssp HSSSSC--CCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTT----------------------CCEEEEECHHHHHHHH
T ss_pred Hhhccc--CCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCC----------------------CcEEEEEcHHHHHHHH
Confidence 457774 56889999999999999999999999999986 3 5899999999999987
Q ss_pred hCCCCCCCCCCCcchHHhhhccccccc--cccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceec
Q 046022 109 AGDDQMNGSDDAPDDLDKKMSAPVSSI--IGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELV 185 (262)
Q Consensus 109 ~~~~~l~~~~~~~~~~~~~~~~~V~~i--m~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~ 185 (262)
.....- ......+..+++++ |.. .+ +.++.+++++.+|++.|. ++++++||+ ++.
T Consensus 176 ~~~~~~-------~~~~~~~~~~v~~~~v~~~--~~--~~~v~~~~~l~~~~~~m~~~~~~~~~Vv-d~~---------- 233 (330)
T 2v8q_E 176 KLFITE-------FPKPEFMSKSLEELQIGTY--AN--IAMVRTTTPVYVALGIFVQHRVSALPVV-DEK---------- 233 (330)
T ss_dssp HHHSCS-------SSCCGGGGSBHHHHTCSBC--SS--CCCEETTCBHHHHHHHHHHHCCSEEEEE-CTT----------
T ss_pred HHHhhc-------cCchhhhcCCHHHhcccCc--CC--ceEECCCCCHHHHHHHHHHcCCCeEEEE-CCC----------
Confidence 641100 00112344567776 431 13 578999999999999998 799999996 322
Q ss_pred ccCCeeeEecHHHHHHHHHhhcccchhhhccccchh----cccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 186 ESASSYQMLTQMDLLRFMMNHASELKDITSHSIREL----GALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 186 ~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL----~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
++.+|+||..||++++.... +. ....+++++ ..++++++++++++++.+|+++|.++++..+||||++|.
T Consensus 234 --~~l~Giit~~dl~~~~~~~~--~~-~~~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~ 307 (330)
T 2v8q_E 234 --GRVVDIYSKFDVINLAAEKT--YN-NLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDV 307 (330)
T ss_dssp --SBEEEEEEGGGTGGGGGSSC--CC-CCSSBHHHHGGGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSB
T ss_pred --CcEEEEEEHHHHHHHHhccc--cc-cccCcHHHHHhccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCc
Confidence 23469999999998775431 10 013455553 123588999999999999999999999999999998764
No 21
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.74 E-value=6.1e-18 Score=132.80 Aligned_cols=124 Identities=17% Similarity=0.232 Sum_probs=102.4
Q ss_pred hcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHH
Q 046022 26 REAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDIL 105 (262)
Q Consensus 26 ~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil 105 (262)
.+.+|+|+|...++++++++++|+.+|++.|.++++.++||++.+. ++++|+|+..|++
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~---------------------~~~~Givt~~dl~ 61 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDR---------------------DNIIGILLAKDLL 61 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSST---------------------TCEEEEEEGGGGG
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCC---------------------CcEEEEEEHHHHH
Confidence 4678999997556788999999999999999999999999998631 5899999999988
Q ss_pred HHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCccccccee
Q 046022 106 AHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVEL 184 (262)
Q Consensus 106 ~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~ 184 (262)
.++... ..+++++|. . +.++.+++++.+|+++|. ++.+++||+ ++.
T Consensus 62 ~~~~~~-----------------~~~v~~~m~----~--~~~v~~~~~l~~~~~~m~~~~~~~~pVv-d~~--------- 108 (129)
T 3jtf_A 62 RYMLEP-----------------ALDIRSLVR----P--AVFIPEVKRLNVLLREFRASRNHLAIVI-DEH--------- 108 (129)
T ss_dssp GGGTCT-----------------TSCGGGGCB----C--CCEEETTCBHHHHHHHHHTSSCCEEEEE-CC----------
T ss_pred hHhccC-----------------CcCHHHHhC----C--CeEeCCCCcHHHHHHHHHhcCCeEEEEE-eCC---------
Confidence 776521 236899985 1 468999999999999998 689999996 432
Q ss_pred cccCCeeeEecHHHHHHHHHhh
Q 046022 185 VESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 185 ~~~~~~~giITqsDIir~L~~~ 206 (262)
|+.+||||++||+++|...
T Consensus 109 ---g~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 109 ---GGISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp ---CCEEEEEEHHHHHHHHHHT
T ss_pred ---CCEEEEEEHHHHHHHHhCC
Confidence 2346999999999998764
No 22
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.73 E-value=1.1e-17 Score=135.00 Aligned_cols=128 Identities=18% Similarity=0.264 Sum_probs=105.2
Q ss_pred hhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEe-cCCCCcccCCCcccccccccccCcCCeEEEEEeHH
Q 046022 24 LLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVA-APPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTML 102 (262)
Q Consensus 24 ~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVv-d~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~ 102 (262)
.|.+.+|+|+|....+++++++++|+.+|++.|.++++.++||+ +.++ ++++|+|+..
T Consensus 16 ~l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~---------------------~~lvGivt~~ 74 (153)
T 3oco_A 16 EMNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDK---------------------DKIIGYAYNY 74 (153)
T ss_dssp HHHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEE---------------------EEEEEEEEHH
T ss_pred ccCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCC---------------------CcEEEEEEHH
Confidence 35778999999643478899999999999999999999999999 6431 6899999999
Q ss_pred HHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCccccc
Q 046022 103 DILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISG 181 (262)
Q Consensus 103 Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g 181 (262)
|++.++... ...+|+++|. . +.++.+++++.+|+++|. ++++++||+ ++.
T Consensus 75 dl~~~~~~~----------------~~~~v~~~m~----~--~~~v~~~~~l~~~~~~m~~~~~~~lpVv-d~~------ 125 (153)
T 3oco_A 75 DIVRQARID----------------DKAKISTIMR----D--IVSVPENMKVPDVMEEMSAHRVPMAIVI-DEY------ 125 (153)
T ss_dssp HHHHHHHHH----------------TTSBGGGTCB----C--CEEEETTSBHHHHHHHHHHTTCSCEEEE-CTT------
T ss_pred HHHhHHhcC----------------CCCcHHHHhC----C--CeEECCCCCHHHHHHHHHHcCCcEEEEE-eCC------
Confidence 999887641 1358999993 2 588999999999999998 799999996 422
Q ss_pred ceecccCCeeeEecHHHHHHHHHhhc
Q 046022 182 VELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 182 ~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
|+.+||||++||++++...+
T Consensus 126 ------g~~vGivt~~dil~~l~~~~ 145 (153)
T 3oco_A 126 ------GGTSGIITDKDVYEELFGNL 145 (153)
T ss_dssp ------SCEEEEECHHHHHHHHHC--
T ss_pred ------CCEEEEeeHHHHHHHHhccC
Confidence 34469999999999998654
No 23
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.73 E-value=3.7e-18 Score=133.53 Aligned_cols=124 Identities=16% Similarity=0.334 Sum_probs=99.9
Q ss_pred cceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHH
Q 046022 27 EAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILA 106 (262)
Q Consensus 27 ~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~ 106 (262)
+.+|+|+|....+++++++++|+.+|++.|.++++.++||++.+. ++++|+|+..|+++
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~---------------------~~~vGivt~~dl~~ 60 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDK---------------------DHIEGILMAKDLLP 60 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSST---------------------TCEEEEEEGGGGGG
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCC---------------------CcEEEEEEHHHHHH
Confidence 568999997544688999999999999999999999999998641 58999999999988
Q ss_pred HHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceec
Q 046022 107 HIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELV 185 (262)
Q Consensus 107 ~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~ 185 (262)
++.... ...+++++|.. +.++.+++++.+|++.|. ++++++||+ ++.
T Consensus 61 ~~~~~~---------------~~~~v~~~m~~------~~~v~~~~~l~~a~~~m~~~~~~~lpVv-d~~---------- 108 (127)
T 3nqr_A 61 FMRSDA---------------EAFSMDKVLRT------AVVVPESKRVDRMLKEFRSQRYHMAIVI-DEF---------- 108 (127)
T ss_dssp GGSTTC---------------CCCCHHHHCBC------CCEEETTCBHHHHHHHHHHTTCCEEEEE-CTT----------
T ss_pred HHhccC---------------CCCCHHHHcCC------CeEECCCCcHHHHHHHHHhcCCeEEEEE-eCC----------
Confidence 765311 13478999951 357999999999999998 799999996 422
Q ss_pred ccCCeeeEecHHHHHHHHHh
Q 046022 186 ESASSYQMLTQMDLLRFMMN 205 (262)
Q Consensus 186 ~~~~~~giITqsDIir~L~~ 205 (262)
|+.+||||++||++++..
T Consensus 109 --g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 109 --GGVSGLVTIEDILELIVG 126 (127)
T ss_dssp --SCEEEEEEHHHHHHHC--
T ss_pred --CCEEEEEEHHHHHHHHhC
Confidence 244699999999998753
No 24
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.73 E-value=4.4e-17 Score=127.71 Aligned_cols=129 Identities=16% Similarity=0.276 Sum_probs=104.7
Q ss_pred hhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHH
Q 046022 25 LREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDI 104 (262)
Q Consensus 25 l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Di 104 (262)
|.+.+|+|+|. ++++++++++|+.+|++.|.++++.++||+| + ++++|+|+..|+
T Consensus 1 l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~----------------------~~~~Givt~~dl 55 (133)
T 2ef7_A 1 MEEEIVKEYMK--TQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-G----------------------NKPVGIITERDI 55 (133)
T ss_dssp CCCCBGGGTSB--CSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-T----------------------TEEEEEEEHHHH
T ss_pred CCcccHHHhcc--CCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-C----------------------CEEEEEEcHHHH
Confidence 35688999995 3678999999999999999999999999999 4 589999999999
Q ss_pred HHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccce
Q 046022 105 LAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVE 183 (262)
Q Consensus 105 l~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~ 183 (262)
+.++..... ...+++++|.. + +.++.+++++.+|++.|. ++.+++||+ +++
T Consensus 56 ~~~~~~~~~--------------~~~~v~~~~~~---~--~~~v~~~~~l~~~~~~~~~~~~~~l~Vv-d~~-------- 107 (133)
T 2ef7_A 56 VKAIGKGKS--------------LETKAEEFMTA---S--LITIREDSPITGALALMRQFNIRHLPVV-DDK-------- 107 (133)
T ss_dssp HHHHHTTCC--------------TTCBGGGTSEE---C--CCCEETTSBHHHHHHHHHHHTCSEEEEE-CTT--------
T ss_pred HHHHhcCCC--------------cccCHHHHcCC---C--CEEECCCCCHHHHHHHHHHcCCCEEEEE-CCC--------
Confidence 888765211 13589999973 2 577999999999999998 799999996 322
Q ss_pred ecccCCeeeEecHHHHHHHHHhhcccc
Q 046022 184 LVESASSYQMLTQMDLLRFMMNHASEL 210 (262)
Q Consensus 184 ~~~~~~~~giITqsDIir~L~~~~~~l 210 (262)
++.+|+||+.||++++.+....+
T Consensus 108 ----g~~~Giit~~dll~~~~~~~~~l 130 (133)
T 2ef7_A 108 ----GNLKGIISIRDITRAIDDMFETM 130 (133)
T ss_dssp ----SCEEEEEEHHHHHHHHHHHC---
T ss_pred ----CeEEEEEEHHHHHHHHHHHHHHh
Confidence 24469999999999998876543
No 25
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.72 E-value=5.3e-18 Score=134.50 Aligned_cols=127 Identities=18% Similarity=0.246 Sum_probs=101.7
Q ss_pred cceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHH
Q 046022 27 EAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILA 106 (262)
Q Consensus 27 ~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~ 106 (262)
+.+|+|+|...++++++++++|+.+|++.|.++++.++||++.+. ++++|+|+..|+++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~---------------------~~~vGivt~~dl~~ 60 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESH---------------------DDVLGVLLAKDLLP 60 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSST---------------------TCEEEEEEGGGGGG
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCC---------------------CcEEEEEEHHHHHH
Confidence 568999997556789999999999999999999999999998641 58999999999988
Q ss_pred HHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceec
Q 046022 107 HIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELV 185 (262)
Q Consensus 107 ~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~ 185 (262)
++.... ....+++++|.. +.++.+++++.+|+++|. ++++++||+ ++.
T Consensus 61 ~~~~~~--------------~~~~~v~~~m~~------~~~v~~~~~l~~~~~~m~~~~~~~~~Vv-d~~---------- 109 (136)
T 3lfr_A 61 LILKAD--------------GDSDDVKKLLRP------ATFVPESKRLNVLLREFRANHNHMAIVI-DEY---------- 109 (136)
T ss_dssp GGGSSS--------------GGGCCGGGTCBC------CCEEETTCBHHHHHHHHHHHTCCEEEEE-CTT----------
T ss_pred HHHhcc--------------CCCcCHHHHcCC------CeEECCCCcHHHHHHHHHhcCCeEEEEE-eCC----------
Confidence 776311 124589999961 478999999999999998 799999996 322
Q ss_pred ccCCeeeEecHHHHHHHHHhhc
Q 046022 186 ESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 186 ~~~~~~giITqsDIir~L~~~~ 207 (262)
|+.+||||.+||++++...+
T Consensus 110 --g~lvGiit~~Dil~~l~~~~ 129 (136)
T 3lfr_A 110 --GGVAGLVTIEDVLEQIVGDI 129 (136)
T ss_dssp --SCEEEEEEHHHHHTTC----
T ss_pred --CCEEEEEEHHHHHHHHhCCC
Confidence 24469999999999876643
No 26
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.72 E-value=3.4e-17 Score=132.11 Aligned_cols=138 Identities=14% Similarity=0.191 Sum_probs=109.1
Q ss_pred HhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHH
Q 046022 23 RLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTML 102 (262)
Q Consensus 23 ~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~ 102 (262)
..+...+++|+|...++++++++++|+.+|++.|.++++.++||+|++ ++++|+|+..
T Consensus 10 ~~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~----------------------~~~~Giit~~ 67 (156)
T 3ctu_A 10 ETFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE----------------------KQFVGTIGLR 67 (156)
T ss_dssp HHHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-----------------------CBEEEEEEHH
T ss_pred HHHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCC----------------------CEEEEEEcHH
Confidence 345667899999866788999999999999999999999999999864 6899999999
Q ss_pred HHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHhcCCCeeEeecCCCCcccccc
Q 046022 103 DILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFSKGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 103 Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~~g~~rv~V~~~~~~~~~~g~ 182 (262)
||+.++..... ........+|+++|.. + ++++.+++++.+|+++|.+. +++||+ +++
T Consensus 68 dl~~~~~~~~~---------~~~~~~~~~v~~~m~~---~--~~~v~~~~~l~~a~~~~~~~-~~lpVv-d~~------- 124 (156)
T 3ctu_A 68 DIMAYQMEHDL---------SQEIMADTDIVHMTKT---D--VAVVSPDFTITEVLHKLVDE-SFLPVV-DAE------- 124 (156)
T ss_dssp HHHHHHHHHTC---------CHHHHTTSBGGGGCBC---S--CCCBCSSCCHHHHHHHTTTS-SEEEEE-CTT-------
T ss_pred HHHHHHHhccc---------cccccccCcHHHhccC---C--ceeeCCCCcHHHHHHHHHHc-CeEEEE-cCC-------
Confidence 99998874210 1123346789999973 2 57899999999999999843 379996 422
Q ss_pred eecccCCeeeEecHHHHHHHHHhhcccc
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNHASEL 210 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~~~~l 210 (262)
++.+|+||++||++++.+....+
T Consensus 125 -----g~~~Giit~~dil~~l~~~~~~~ 147 (156)
T 3ctu_A 125 -----GIFQGIITRKSILKAVNALLHDF 147 (156)
T ss_dssp -----SBEEEEEETTHHHHHHHHHSCC-
T ss_pred -----CeEEEEEEHHHHHHHHHHHHHhh
Confidence 24469999999999998876543
No 27
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.71 E-value=4.6e-17 Score=135.11 Aligned_cols=127 Identities=16% Similarity=0.177 Sum_probs=104.0
Q ss_pred hhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHH
Q 046022 24 LLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLD 103 (262)
Q Consensus 24 ~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~D 103 (262)
.+...+|+|+|+..++++++++++|+.+|++.|.++++.++||++.+. ++++|+|+..|
T Consensus 32 ~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~---------------------~~lvGivt~~D 90 (173)
T 3ocm_A 32 TLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSL---------------------DEVVGIGRAKD 90 (173)
T ss_dssp HHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSST---------------------TSEEEEEEHHH
T ss_pred ccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCC---------------------CCEEEEEEHHH
Confidence 357789999997556789999999999999999999999999998642 58999999999
Q ss_pred HHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 104 ILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 104 il~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
|+.++.... ..++. +|. + +.++.+++++.+|+++|. ++++++||+ ++.
T Consensus 91 l~~~~~~~~----------------~~~v~-~~~----~--~~~v~~~~~l~~al~~m~~~~~~~~~Vv-de~------- 139 (173)
T 3ocm_A 91 LVADLITEG----------------RVRRN-RLR----D--PIIVHESIGILRLMDTLKRSRGQLVLVA-DEF------- 139 (173)
T ss_dssp HHHHHHHHS----------------SCCGG-GSB----C--CCEECGGGCHHHHHHHHHHSTTCCEEEE-CTT-------
T ss_pred HHHHHhcCC----------------cchhH-hcC----C--CeEECCCCcHHHHHHHHHHcCCeEEEEE-eCC-------
Confidence 998876311 23677 443 2 578999999999999998 789999996 322
Q ss_pred eecccCCeeeEecHHHHHHHHHhhc
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
|+.+||||..||++.+...+
T Consensus 140 -----g~lvGiIT~~Dil~~l~~~i 159 (173)
T 3ocm_A 140 -----GAIEGLVTPIDVFEAIAGEF 159 (173)
T ss_dssp -----CCEEEEECHHHHHHHHHCCC
T ss_pred -----CCEEEEEeHHHHHHHHhCcC
Confidence 24469999999999998654
No 28
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=1.5e-17 Score=135.94 Aligned_cols=132 Identities=20% Similarity=0.251 Sum_probs=108.3
Q ss_pred HhhhcceeccccccC-CcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeH
Q 046022 23 RLLREAKVRDLTAEK-RRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTM 101 (262)
Q Consensus 23 ~~l~~~~v~dlm~~~-~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~ 101 (262)
..|..++|+|+|..+ .+++++++++|+.+|++.|.++++.++||+|++ ++++|+|+.
T Consensus 19 ~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~----------------------~~~~Givt~ 76 (165)
T 3fhm_A 19 FQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDAD----------------------GVVLGIFTE 76 (165)
T ss_dssp CSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT----------------------SCEEEEEEH
T ss_pred HhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC----------------------CeEEEEEEH
Confidence 467889999999642 467899999999999999999999999999964 689999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccc
Q 046022 102 LDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENIS 180 (262)
Q Consensus 102 ~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~ 180 (262)
.||++++.... ......+|+++|.. . +.++.+++++.+|+++|. ++++++||+.+ +++
T Consensus 77 ~dl~~~~~~~~------------~~~~~~~v~~~m~~---~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---g~~- 135 (165)
T 3fhm_A 77 RDLVKAVAGQG------------AASLQQSVSVAMTK---N--VVRCQHNSTTDQLMEIMTGGRFRHVPVEEN---GRL- 135 (165)
T ss_dssp HHHHHHHHHHG------------GGGGTSBGGGTSBS---S--CCCBCTTCBHHHHHHHHHHHTCSEEEEEET---TEE-
T ss_pred HHHHHHHHhcC------------CccccCCHHHHhcC---C--CeEECCCCcHHHHHHHHHHcCCCEEEEEEC---CEE-
Confidence 99999877411 12335689999972 3 578999999999999998 79999999633 233
Q ss_pred cceecccCCeeeEecHHHHHHHHHhhc
Q 046022 181 GVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 181 g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
+|+||+.||++++....
T Consensus 136 ----------~Giit~~dil~~~~~~~ 152 (165)
T 3fhm_A 136 ----------AGIISIGDVVKARIGEI 152 (165)
T ss_dssp ----------EEEEEHHHHHHHTTCC-
T ss_pred ----------EEEEEHHHHHHHHHHHH
Confidence 59999999999987654
No 29
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.70 E-value=6.8e-17 Score=124.59 Aligned_cols=120 Identities=16% Similarity=0.257 Sum_probs=99.7
Q ss_pred ceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHH
Q 046022 28 AKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAH 107 (262)
Q Consensus 28 ~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~ 107 (262)
++|+|+|. ++++++++++|+.+|++.|.++++.++||+|++ ++++|+|+..|++.+
T Consensus 1 ~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----------------------~~~~G~vt~~dl~~~ 56 (122)
T 3kpb_A 1 TLVKDILS--KPPITAHSNISIMEAAKILIKHNINHLPIVDEH----------------------GKLVGIITSWDIAKA 56 (122)
T ss_dssp CBHHHHCC--SCCCCEETTSBHHHHHHHHHHHTCSCEEEECTT----------------------SBEEEEECHHHHHHH
T ss_pred CchHHhhC--CCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCC----------------------CCEEEEEEHHHHHHH
Confidence 47899995 467899999999999999999999999999864 689999999999998
Q ss_pred HhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecc
Q 046022 108 IAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVE 186 (262)
Q Consensus 108 l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~ 186 (262)
+.... .+++++|.. + +.++.+++++.+|++.|. ++.+++||+ +++
T Consensus 57 ~~~~~-----------------~~v~~~~~~---~--~~~v~~~~~l~~~~~~~~~~~~~~l~Vv-d~~----------- 102 (122)
T 3kpb_A 57 LAQNK-----------------KTIEEIMTR---N--VITAHEDEPVDHVAIKMSKYNISGVPVV-DDY----------- 102 (122)
T ss_dssp HHTTC-----------------CBGGGTSBS---S--CCCEETTSBHHHHHHHHHHHTCSEEEEE-CTT-----------
T ss_pred HHhcc-----------------cCHHHHhcC---C--CeEECCCCCHHHHHHHHHHhCCCeEEEE-CCC-----------
Confidence 77521 278999973 2 577999999999999998 799999996 432
Q ss_pred cCCeeeEecHHHHHHHHHhh
Q 046022 187 SASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 187 ~~~~~giITqsDIir~L~~~ 206 (262)
++.+|+||+.||++++.++
T Consensus 103 -g~~~Givt~~dl~~~l~~~ 121 (122)
T 3kpb_A 103 -RRVVGIVTSEDISRLFGGK 121 (122)
T ss_dssp -CBEEEEEEHHHHHHHHC--
T ss_pred -CCEEEEEeHHHHHHHhhcC
Confidence 2346999999999998653
No 30
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.70 E-value=1.2e-16 Score=125.88 Aligned_cols=128 Identities=18% Similarity=0.380 Sum_probs=103.2
Q ss_pred HhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHH
Q 046022 23 RLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTML 102 (262)
Q Consensus 23 ~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~ 102 (262)
.+|.+.+|+++|. ++++++++++|+.+|++.|.++++.++||+|++ ++++|+|+..
T Consensus 3 ~~l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----------------------~~~~Givt~~ 58 (138)
T 2p9m_A 3 DTLKNIKVKDVMT--KNVITAKRHEGVVEAFEKMLKYKISSLPVIDDE----------------------NKVIGIVTTT 58 (138)
T ss_dssp --CTTCBGGGTSB--CSCCCEETTSBHHHHHHHHHHHTCCEEEEECTT----------------------CBEEEEEEHH
T ss_pred cccccCCHHHhhc--CCceEECCCCcHHHHHHHHHHCCCcEEEEECCC----------------------CeEEEEEEHH
Confidence 4678899999995 467899999999999999999999999999864 5899999999
Q ss_pred HH-HHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cC-----CCeeEeecCCC
Q 046022 103 DI-LAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KG-----IHRALVPMDSR 175 (262)
Q Consensus 103 Di-l~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g-----~~rv~V~~~~~ 175 (262)
|+ +.++.... ....+++++|.. . +.++.+++++.+|++.|. ++ ++++||+ +++
T Consensus 59 dl~~~~~~~~~--------------~~~~~v~~~m~~---~--~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vv-d~~ 118 (138)
T 2p9m_A 59 DIGYNLIRDKY--------------TLETTIGDVMTK---D--VITIHEDASILEAIKKMDISGKKEEIINQLPVV-DKN 118 (138)
T ss_dssp HHHHHHTTTCC--------------CSSCBHHHHSCS---S--CCCEETTSBHHHHHHHHTCC-----CCCEEEEE-CTT
T ss_pred HHHHHHHhhcc--------------cCCcCHHHHhCC---C--cEEECCCCCHHHHHHHHHhcCCccccccEEEEE-CCC
Confidence 99 77765421 123579999972 2 577999999999999998 67 8999996 322
Q ss_pred CcccccceecccCCeeeEecHHHHHHHHHhh
Q 046022 176 MENISGVELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 176 ~~~~~g~~~~~~~~~~giITqsDIir~L~~~ 206 (262)
++.+|+||..||++++.+.
T Consensus 119 ------------g~~~Giit~~dll~~~~~~ 137 (138)
T 2p9m_A 119 ------------NKLVGIISDGDIIRTISKI 137 (138)
T ss_dssp ------------SBEEEEEEHHHHHHHHHHC
T ss_pred ------------CeEEEEEEHHHHHHHHHhh
Confidence 2346999999999998764
No 31
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.70 E-value=1.6e-16 Score=127.93 Aligned_cols=137 Identities=13% Similarity=0.249 Sum_probs=106.2
Q ss_pred hhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHH
Q 046022 24 LLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLD 103 (262)
Q Consensus 24 ~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~D 103 (262)
.|...+|+|+|....+++++++++|+.+|++.|.++++.++||+|.+ ++++|+|+..|
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~----------------------~~~~Givt~~d 64 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTS----------------------YKLHGLISMTM 64 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTT----------------------CCEEEEEEHHH
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCC----------------------CCEEEEeeHHH
Confidence 46788999999643477899999999999999999999999999864 58999999999
Q ss_pred HHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 104 ILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 104 il~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
++.++.....+ ........++.++|.. + +.++.+++++.+|++.|. +++ +||+ ++.
T Consensus 65 l~~~~~~~~~~--------~~~~~~~~~v~~~m~~---~--~~~v~~~~~l~~a~~~m~~~~~--l~Vv-d~~------- 121 (157)
T 2emq_A 65 MMDAILGLERI--------EFERLETMKVEEVMNR---N--IPRLRLDDSLMKAVGLIVNHPF--VCVE-NDD------- 121 (157)
T ss_dssp HHHHSBCSSSB--------CGGGGGTCBGGGTCBC---C--CCEEETTSBHHHHHHHHHHSSE--EEEE-CSS-------
T ss_pred HHHHHhccccc--------chHHhcCCcHHHHhCC---C--CceecCCCcHHHHHHHHhhCCE--EEEE-cCC-------
Confidence 99887642211 1122345689999973 3 578999999999999998 555 8885 322
Q ss_pred eecccCCeeeEecHHHHHHHHHhhcccc
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNHASEL 210 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~~~~l 210 (262)
++.+|+||++||++++......+
T Consensus 122 -----g~~~Giit~~dil~~~~~~~~~~ 144 (157)
T 2emq_A 122 -----GYFAGIFTRREVLKQLNKQLHRP 144 (157)
T ss_dssp -----SSEEEEEEHHHHHHHHHHTTCCC
T ss_pred -----CeEEEEEEHHHHHHHHHHHhhcc
Confidence 24469999999999998865443
No 32
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.69 E-value=1.4e-17 Score=132.72 Aligned_cols=142 Identities=18% Similarity=0.259 Sum_probs=102.9
Q ss_pred hcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHH
Q 046022 26 REAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDIL 105 (262)
Q Consensus 26 ~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil 105 (262)
...+|+|+|....+++++++++|+.+|++.|.++++.++||+|.+ ++++|+|+..|++
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----------------------~~~~G~vt~~dl~ 60 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDED----------------------WKLVGLVSDYDLL 60 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTT----------------------CBEEEEEEHHHHT
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCC----------------------CeEEEEEEHHHHH
Confidence 457899999754478899999999999999999999999999864 5899999999988
Q ss_pred HHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCccccccee
Q 046022 106 AHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVEL 184 (262)
Q Consensus 106 ~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~ 184 (262)
.++.....+................++.++|.. . +.++.+++++.+|+++|. ++++++||+ +++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~---~--~~~v~~~~~l~~a~~~~~~~~~~~l~Vv-d~~--------- 125 (152)
T 4gqw_A 61 ALDSGDSTWKTFNAVQKLLSKTNGKLVGDLMTP---A--PLVVEEKTNLEDAAKILLETKYRRLPVV-DSD--------- 125 (152)
T ss_dssp TCC----CCHHHHHHHTC-----CCBHHHHSEE---S--CCCEESSSBHHHHHHHHHHSSCCEEEEE-CTT---------
T ss_pred HhhcccCcccchHHHHHHHHHhccccHHHhcCC---C--ceEECCCCcHHHHHHHHHHCCCCEEEEE-CCC---------
Confidence 654321110000000000012235689999973 2 467999999999999998 799999996 322
Q ss_pred cccCCeeeEecHHHHHHHHHhhc
Q 046022 185 VESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 185 ~~~~~~~giITqsDIir~L~~~~ 207 (262)
++.+|+||++||++++.+..
T Consensus 126 ---g~~~Giit~~dil~~~~~~~ 145 (152)
T 4gqw_A 126 ---GKLVGIITRGNVVRAALQIK 145 (152)
T ss_dssp ---SBEEEEEEHHHHHHHHHC--
T ss_pred ---CcEEEEEEHHHHHHHHHhcc
Confidence 23469999999999998753
No 33
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.69 E-value=8.7e-17 Score=129.04 Aligned_cols=131 Identities=19% Similarity=0.267 Sum_probs=102.7
Q ss_pred cchHHHHHhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeE
Q 046022 16 HAADENQRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHY 95 (262)
Q Consensus 16 ~~~~~~~~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~ 95 (262)
+....+.+.+ .++|+|+|....+++++++++|+.+|++.|.++++.++||+|++ +++
T Consensus 17 ~~~~~l~~~l-~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~----------------------~~~ 73 (149)
T 3k2v_A 17 HPGGALGRKL-LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDD----------------------MNI 73 (149)
T ss_dssp ---CHHHHHT-TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTT----------------------CBE
T ss_pred CCCchhchhc-ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCC----------------------CcE
Confidence 3333444433 36999999642367899999999999999999999999999864 689
Q ss_pred EEEEeHHHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCC
Q 046022 96 IGMLTMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDS 174 (262)
Q Consensus 96 vGivs~~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~ 174 (262)
+|+|+..|+++.+..... ....++.++|.. . +.++.+++++.+|++.|. ++++++||+.+
T Consensus 74 ~Givt~~dl~~~~~~~~~-------------~~~~~v~~~m~~---~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~- 134 (149)
T 3k2v_A 74 IGIFTDGDLRRVFDTGVD-------------MRDASIADVMTR---G--GIRIRPGTLAVDALNLMQSRHITCVLVADG- 134 (149)
T ss_dssp EEEEEHHHHHHHHCSSSC-------------CTTCBHHHHSEE---S--CCEECTTCBHHHHHHHHHHHTCSEEEEEET-
T ss_pred EEEecHHHHHHHHhcCCC-------------cccCcHHHHcCC---C--CeEECCCCCHHHHHHHHHHcCCCEEEEecC-
Confidence 999999999988875221 124589999973 2 578999999999999998 79999999643
Q ss_pred CCcccccceecccCCeeeEecHHHHHH
Q 046022 175 RMENISGVELVESASSYQMLTQMDLLR 201 (262)
Q Consensus 175 ~~~~~~g~~~~~~~~~~giITqsDIir 201 (262)
+ ++ +|+||.+||++
T Consensus 135 ~--~~-----------~Giit~~dil~ 148 (149)
T 3k2v_A 135 D--HL-----------LGVVHMHDLLR 148 (149)
T ss_dssp T--EE-----------EEEEEHHHHTC
T ss_pred C--EE-----------EEEEEHHHhhc
Confidence 2 33 59999999975
No 34
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.69 E-value=1.1e-16 Score=125.83 Aligned_cols=127 Identities=20% Similarity=0.243 Sum_probs=101.4
Q ss_pred hcc-eeccccccC-CcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHH
Q 046022 26 REA-KVRDLTAEK-RRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLD 103 (262)
Q Consensus 26 ~~~-~v~dlm~~~-~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~D 103 (262)
.++ +|+|+|..+ ++++++++++|+.+|++.|.++++.++||++ + ++++|+|+..|
T Consensus 3 ~~m~~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~----------------------~~~~Givt~~d 59 (135)
T 2rc3_A 3 GHMKTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-D----------------------EKLVGILTERD 59 (135)
T ss_dssp --CCBHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-T----------------------TEEEEEEEHHH
T ss_pred ccceeHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-C----------------------CEEEEEEehHH
Confidence 355 899999621 4678999999999999999999999999998 4 58999999999
Q ss_pred HHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 104 ILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 104 il~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
+++++..... .....+++++|.. + +.++.+++++.+|++.|. ++++++||+. + ++
T Consensus 60 l~~~~~~~~~------------~~~~~~v~~~m~~---~--~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~--g~---- 115 (135)
T 2rc3_A 60 FSRKSYLLDK------------PVKDTQVKEIMTR---Q--VAYVDLNNTNEDCMALITEMRVRHLPVLD-D--GK---- 115 (135)
T ss_dssp HHHHGGGSSS------------CGGGSBGGGTSBC---S--CCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T--TE----
T ss_pred HHHHHHHcCC------------CcccCCHHHhccC---C--CeEECCCCcHHHHHHHHHHhCCCEEEEEe-C--CE----
Confidence 9976653210 1234689999973 3 578999999999999998 7999999964 2 13
Q ss_pred eecccCCeeeEecHHHHHHHHHhh
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~ 206 (262)
.+|+||++||++++.++
T Consensus 116 -------~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 116 -------VIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp -------EEEEEEHHHHHHHHHC-
T ss_pred -------EEEEEEHHHHHHHHHhc
Confidence 35999999999998764
No 35
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.69 E-value=2.1e-16 Score=124.51 Aligned_cols=128 Identities=16% Similarity=0.223 Sum_probs=104.0
Q ss_pred hhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHH
Q 046022 24 LLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLD 103 (262)
Q Consensus 24 ~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~D 103 (262)
.|...+|+|+|. ++++++++++|+.+|++.|.++++.++||+|++ ++++|+|+..|
T Consensus 3 ~l~~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----------------------~~~~Givt~~d 58 (138)
T 2yzi_A 3 MDMKAPIKVYMT--KKLLGVKPSTSVQEASRLMMEFDVGSLVVINDD----------------------GNVVGFFTKSD 58 (138)
T ss_dssp CCTTSBGGGTCB--CCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT----------------------SCEEEEEEHHH
T ss_pred chhhhhHHHHhc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC----------------------CcEEEEEeHHH
Confidence 467789999995 467899999999999999999999999999864 68999999999
Q ss_pred HHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 104 ILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 104 il~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
+++.+..... ....+++++|.. + +.++.+++++.+|+++|. ++++++ |+.++
T Consensus 59 l~~~~~~~~~-------------~~~~~v~~~m~~---~--~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~-------- 111 (138)
T 2yzi_A 59 IIRRVIVPGL-------------PYDIPVERIMTR---N--LITANVNTPLGEVLRKMAEHRIKHI-LIEEE-------- 111 (138)
T ss_dssp HHHHTTTTCC-------------CTTSBGGGTCBC---S--CCEEETTSBHHHHHHHHHHHTCSEE-EEEET--------
T ss_pred HHHHHHhcCC-------------cccCCHHHHhhC---C--CeEECCCCcHHHHHHHHHhcCCCEE-EECCC--------
Confidence 9865543210 124589999973 3 578999999999999998 799999 85322
Q ss_pred eecccCCeeeEecHHHHHHHHHhhc
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
++.+|+||+.||++++.+..
T Consensus 112 -----g~~~Giit~~dil~~~~~~~ 131 (138)
T 2yzi_A 112 -----GKIVGIFTLSDLLEASRRRL 131 (138)
T ss_dssp -----TEEEEEEEHHHHHHHHHCCS
T ss_pred -----CCEEEEEEHHHHHHHHHHHH
Confidence 23469999999999998754
No 36
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.69 E-value=4.8e-16 Score=123.25 Aligned_cols=122 Identities=19% Similarity=0.228 Sum_probs=100.8
Q ss_pred cceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCC--eEEEEEeHHHH
Q 046022 27 EAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRK--HYIGMLTMLDI 104 (262)
Q Consensus 27 ~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~--~~vGivs~~Di 104 (262)
+.+|+|+|. ++++++++++|+.+|++.|.++++.++||+|++ + +++|+|+..|+
T Consensus 4 ~~~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----------------------~~~~~~Givt~~dl 59 (141)
T 2rih_A 4 AIRTSELLK--RPPVSLPETATIREVATELAKNRVGLAVLTARD----------------------NPKRPVAVVSERDI 59 (141)
T ss_dssp -CBGGGGCC--SCCEEEETTCBHHHHHHHHHHHTCSEEEEEETT----------------------EEEEEEEEEEHHHH
T ss_pred ceEHHHHhc--CCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCC----------------------CcceeEEEEEHHHH
Confidence 468999995 477899999999999999999999999999864 5 89999999999
Q ss_pred HHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccce
Q 046022 105 LAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVE 183 (262)
Q Consensus 105 l~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~ 183 (262)
+.++.... ....+++++|.. + +.++.++ ++.+|++.|. ++++++||+ +++
T Consensus 60 ~~~~~~~~--------------~~~~~v~~~m~~---~--~~~v~~~-~l~~a~~~m~~~~~~~l~Vv-d~~-------- 110 (141)
T 2rih_A 60 LRAVAQRL--------------DLDGPAMPIANS---P--ITVLDTD-PVHVAAEKMRRHNIRHVVVV-NKN-------- 110 (141)
T ss_dssp HHHHHTTC--------------CTTSBSGGGCBC---C--CEEETTS-BHHHHHHHHHHHTCSEEEEE-CTT--------
T ss_pred HHHHhcCC--------------CCCCCHHHHcCC---C--CeEEcCC-CHHHHHHHHHHcCCeEEEEE-cCC--------
Confidence 99876521 113589999973 3 6889999 9999999998 799999996 322
Q ss_pred ecccCCeeeEecHHHHHHHHHh
Q 046022 184 LVESASSYQMLTQMDLLRFMMN 205 (262)
Q Consensus 184 ~~~~~~~~giITqsDIir~L~~ 205 (262)
++.+|+||++||++++..
T Consensus 111 ----g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 111 ----GELVGVLSIRDLCFERAI 128 (141)
T ss_dssp ----SCEEEEEEHHHHHSCHHH
T ss_pred ----CcEEEEEEHHHHHHHHHH
Confidence 244699999999987665
No 37
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.67 E-value=1.2e-16 Score=136.58 Aligned_cols=161 Identities=11% Similarity=0.126 Sum_probs=98.0
Q ss_pred ceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHH
Q 046022 28 AKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAH 107 (262)
Q Consensus 28 ~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~ 107 (262)
.+++++|. ++++++++++|+.+|+++|.++++.++||+|++ ++++|+|+..|+...
T Consensus 13 ~~~~~~~~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~----------------------~~l~Givt~~dl~~~ 68 (213)
T 1vr9_A 13 MKVKKWVT--QDFPMVEESATVRECLHRMRQYQTNECIVKDRE----------------------GHFRGVVNKEDLLDL 68 (213)
T ss_dssp CBGGGGCB--SCSCEEETTCBHHHHHHHHHHTTSSEEEEECTT----------------------SBEEEEEEGGGGTTS
T ss_pred cCHHHhhc--CCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCC----------------------CEEEEEEEHHHHHhh
Confidence 46899995 467799999999999999999999999999864 689999999997653
Q ss_pred HhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecc
Q 046022 108 IAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVE 186 (262)
Q Consensus 108 l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~ 186 (262)
+. ..+|+++|.. + +.++.+++++.+|+++|. ++++++||+ +++
T Consensus 69 ~~-------------------~~~v~~im~~---~--~~~v~~~~~l~~a~~~m~~~~~~~lpVv-d~~----------- 112 (213)
T 1vr9_A 69 DL-------------------DSSVFNKVSL---P--DFFVHEEDNITHALLLFLEHQEPYLPVV-DEE----------- 112 (213)
T ss_dssp CT-------------------TSBSGGGCBC---T--TCCEETTSBHHHHHHHHHHCCCSEEEEE-CTT-----------
T ss_pred cC-------------------CCcHHHHccC---C--CEEECCCCcHHHHHHHHHHhCCCEEEEE-cCC-----------
Confidence 32 2479999973 3 578999999999999998 799999996 422
Q ss_pred cCCeeeEecHHHHHHHHHhhcccchhhhccccchhcccCcC-eEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 187 SASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGALNEN-VFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 187 ~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~~~~~-v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
++.+|+||.+||++++...... .+ .+++- +.+.....++.+|.+.|.+++++.++|++.+|+
T Consensus 113 -g~lvGiit~~Dil~~~~~~~~~---------~~--~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 113 -MRLKGAVSLHDFLEALIEALAM---------DV--PGIRFSVLLEDKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp -CBEEEEEEHHHHHHHHHHSCC-----------------------------------------------------
T ss_pred -CEEEEEEEHHHHHHHHHHHhcC---------CC--CcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 2345999999999988653211 11 11111 112233445999999999999999999877664
No 38
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.67 E-value=2.2e-16 Score=127.89 Aligned_cols=135 Identities=20% Similarity=0.280 Sum_probs=105.9
Q ss_pred hhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHH
Q 046022 24 LLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLD 103 (262)
Q Consensus 24 ~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~D 103 (262)
.|...+|+|+|..+.+++++++++|+.+|++.|.++++.++||+|++ ++++|+|+..|
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~----------------------~~lvGivt~~d 67 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPS----------------------YRLHGLIGTNM 67 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTT----------------------CBEEEEEEHHH
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCC----------------------CCEEEEeEHHH
Confidence 35678999999643367899999999999999999999999999864 58999999999
Q ss_pred HHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 104 ILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 104 il~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
|+.++.....+ ........+|.++|.. + +.++.+++++.+|+++|. +++ +||+ ++.
T Consensus 68 l~~~~~~~~~~--------~~~~~~~~~v~~~m~~---~--~~~v~~~~~l~~a~~~m~~~~~--lpVv-d~~------- 124 (159)
T 1yav_A 68 IMNSIFGLERI--------EFEKLDQITVEEVMLT---D--IPRLHINDPIMKGFGMVINNGF--VCVE-NDE------- 124 (159)
T ss_dssp HHHHHBCSSSB--------CGGGTTTSBHHHHSBC---S--CCEEETTSBHHHHHHHTTTCSE--EEEE-CTT-------
T ss_pred HHHHhhhhccc--------chhhhccCCHHHhcCC---C--CceEcCCCCHHHHHHHHHhCCE--EEEE-eCC-------
Confidence 99988753211 1122345689999973 3 578999999999999998 444 8885 422
Q ss_pred eecccCCeeeEecHHHHHHHHHhhcc
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNHAS 208 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~~~ 208 (262)
++.+|+||++||++++.....
T Consensus 125 -----g~~vGiit~~dil~~~~~~~~ 145 (159)
T 1yav_A 125 -----QVFEGIFTRRVVLKELNKHIR 145 (159)
T ss_dssp -----CBEEEEEEHHHHHHHHHHHC-
T ss_pred -----CeEEEEEEHHHHHHHHHHHHH
Confidence 234699999999999987653
No 39
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.67 E-value=1e-16 Score=131.48 Aligned_cols=143 Identities=17% Similarity=0.241 Sum_probs=104.8
Q ss_pred cceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHH
Q 046022 27 EAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILA 106 (262)
Q Consensus 27 ~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~ 106 (262)
.++|+|+|..+.+++++++++|+.+|++.|.++++.++||+|++ ++++|+|+..||++
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~----------------------~~~~Givt~~dl~~ 60 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDN----------------------WTLVGVVSDYDLLA 60 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT----------------------CBEEEEEEHHHHTC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCC----------------------CeEEEEEEHHHHHh
Confidence 36899999654478899999999999999999999999999865 68999999999985
Q ss_pred HHhCCC------C-CCCCCCCcchH-------HhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEee
Q 046022 107 HIAGDD------Q-MNGSDDAPDDL-------DKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVP 171 (262)
Q Consensus 107 ~l~~~~------~-l~~~~~~~~~~-------~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~ 171 (262)
++.... . +......+..+ ......+|+++|.. + +.++.+++++.+|+++|. ++++++||+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~---~--~~~v~~~~~l~~a~~~m~~~~~~~lpVv 135 (180)
T 3sl7_A 61 LDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTP---S--PLVVRDSTNLEDAARLLLETKFRRLPVV 135 (180)
T ss_dssp C-------------------CCCSHHHHHHHHHTTTTCBHHHHSEE---S--CCCEETTSBHHHHHHHHTTSTTCEEEEE
T ss_pred hhhhccccCCcccccccccchhhhhHHHHHHHhccccccHHHHhCC---C--ceEeCCCCcHHHHHHHHHHcCCCEEEEE
Confidence 332110 0 00000011111 12236789999973 2 467999999999999998 699999996
Q ss_pred cCCCCcccccceecccCCeeeEecHHHHHHHHHhhccc
Q 046022 172 MDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASE 209 (262)
Q Consensus 172 ~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~ 209 (262)
+++ ++.+|+||++||++++......
T Consensus 136 -d~~------------g~~vGiit~~dil~~~~~~~~~ 160 (180)
T 3sl7_A 136 -DAD------------GKLIGILTRGNVVRAALQIKRN 160 (180)
T ss_dssp -CTT------------CBEEEEEEHHHHHHHHHHHHHT
T ss_pred -CCC------------CeEEEEEEHHHHHHHHHHHhhh
Confidence 422 2446999999999999886543
No 40
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.67 E-value=5.5e-17 Score=131.63 Aligned_cols=121 Identities=17% Similarity=0.236 Sum_probs=99.9
Q ss_pred hhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHH
Q 046022 24 LLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLD 103 (262)
Q Consensus 24 ~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~D 103 (262)
.+...+|+|+|....+++++++++|+.+|++.|.++++.++||++.++ ++++|+|+..|
T Consensus 34 ~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~---------------------~~lvGivt~~d 92 (156)
T 3oi8_A 34 DFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDK---------------------DEVLGILHAKD 92 (156)
T ss_dssp HHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSST---------------------TCEEEEEEGGG
T ss_pred ccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCC---------------------CcEEEEEEHHH
Confidence 356789999997545788999999999999999999999999998642 48999999999
Q ss_pred HHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 104 ILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 104 il~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
++.++... ...+++++|.. +.++.+++++.+|+++|. ++++++||+ ++.
T Consensus 93 l~~~~~~~----------------~~~~v~~im~~------~~~v~~~~~l~~a~~~m~~~~~~~~~Vv-d~~------- 142 (156)
T 3oi8_A 93 LLKYMFNP----------------EQFHLKSILRP------AVFVPEGKSLTALLKEFREQRNHMAIVI-DEY------- 142 (156)
T ss_dssp GGGGSSCG----------------GGCCHHHHCBC------CCEEETTSBHHHHHHHHHHTTCCEEEEE-CTT-------
T ss_pred HHHHHHcC----------------CcccHHHHcCC------CEEECCCCCHHHHHHHHHhcCCeEEEEE-CCC-------
Confidence 88765431 24579999961 468999999999999998 799999996 422
Q ss_pred eecccCCeeeEecHHHHH
Q 046022 183 ELVESASSYQMLTQMDLL 200 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIi 200 (262)
|+.+||||++||+
T Consensus 143 -----g~~~Givt~~Dil 155 (156)
T 3oi8_A 143 -----GGTSGLVTFEDII 155 (156)
T ss_dssp -----SSEEEEEEHHHHC
T ss_pred -----CCEEEEEEHHHhc
Confidence 2446999999986
No 41
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.67 E-value=1.9e-16 Score=123.73 Aligned_cols=124 Identities=14% Similarity=0.197 Sum_probs=101.0
Q ss_pred hcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHH
Q 046022 26 REAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDIL 105 (262)
Q Consensus 26 ~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil 105 (262)
.+.+++++|.. +++++++++|+.+|++.|.++++.++||+|. ++++|+|+..|++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----------------------~~~~Givt~~dl~ 57 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDG-----------------------ERYLGMVHLSRLL 57 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEET-----------------------TEEEEEEEHHHHH
T ss_pred cceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEEC-----------------------CEEEEEEEHHHHH
Confidence 46789999964 5679999999999999999999999999986 3899999999998
Q ss_pred HHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCccccccee
Q 046022 106 AHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVEL 184 (262)
Q Consensus 106 ~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~ 184 (262)
+.+.+... ...+++++|.. + +.++.+++++.+|++.|. ++.+++||+ +++
T Consensus 58 ~~~~~~~~--------------~~~~v~~~m~~---~--~~~v~~~~~l~~~~~~~~~~~~~~lpVv-d~~--------- 108 (128)
T 3gby_A 58 EGRKGWPT--------------VKEKLGEELLE---T--VRSYRPGEQLFDNLISVAAAKCSVVPLA-DED--------- 108 (128)
T ss_dssp TTCSSSCC--------------TTCBCCGGGCB---C--CCCBCTTSBGGGSHHHHHHCSSSEEEEE-CTT---------
T ss_pred HHHhhCCc--------------ccCcHHHHccC---C--CcEECCCCCHHHHHHHHHhCCCcEEEEE-CCC---------
Confidence 76553210 12479999973 2 567999999999999998 789999996 322
Q ss_pred cccCCeeeEecHHHHHHHHHhh
Q 046022 185 VESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 185 ~~~~~~~giITqsDIir~L~~~ 206 (262)
|+.+|+||++||++++.+.
T Consensus 109 ---g~~~Giit~~dll~~l~~~ 127 (128)
T 3gby_A 109 ---GRYEGVVSRKRILGFLAER 127 (128)
T ss_dssp ---CBEEEEEEHHHHHHHHHTT
T ss_pred ---CCEEEEEEHHHHHHHHHhh
Confidence 2346999999999998753
No 42
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.66 E-value=6.1e-16 Score=122.23 Aligned_cols=131 Identities=21% Similarity=0.329 Sum_probs=102.6
Q ss_pred hhcceecc---ccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeH
Q 046022 25 LREAKVRD---LTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTM 101 (262)
Q Consensus 25 l~~~~v~d---lm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~ 101 (262)
+.+.++++ +|. ++++++++++|+.+|++.|.++++.++||+|.+ ++++|+|+.
T Consensus 5 ~~~~~v~~~~~~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----------------------~~~~Givt~ 60 (144)
T 2nyc_A 5 FLKIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN----------------------GYLINVYEA 60 (144)
T ss_dssp GGGSBGGGSSCCBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT----------------------CBEEEEEEH
T ss_pred hhhcchhhcCCCCC--CCceEECCCCcHHHHHHHHHHcCcceeeEEcCC----------------------CcEEEEEcH
Confidence 45678888 664 567899999999999999999999999999864 589999999
Q ss_pred HHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCC---CCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCc
Q 046022 102 LDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCP---EGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRME 177 (262)
Q Consensus 102 ~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~---~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~ 177 (262)
.|++.++.... ......++.++|...+ .+ +.++.+++++.+|++.|. ++++++||+ ++.
T Consensus 61 ~dl~~~~~~~~------------~~~~~~~v~~~m~~~~~~~~~--~~~v~~~~~l~~~~~~m~~~~~~~l~Vv-d~~-- 123 (144)
T 2nyc_A 61 YDVLGLIKGGI------------YNDLSLSVGEALMRRSDDFEG--VYTCTKNDKLSTIMDNIRKARVHRFFVV-DDV-- 123 (144)
T ss_dssp HHHHHHHHTC----------------CCSBHHHHHHHCC--------CEECTTSBHHHHHHHHHHHTCSEEEEE-CTT--
T ss_pred HHHHHHhcccc------------cccCCccHHHHHhcCccccCC--CeEECCCCcHHHHHHHHHHCCCCEEEEE-CCC--
Confidence 99998876421 0122457899886311 02 578999999999999998 799999996 422
Q ss_pred ccccceecccCCeeeEecHHHHHHHHHhh
Q 046022 178 NISGVELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 178 ~~~g~~~~~~~~~~giITqsDIir~L~~~ 206 (262)
++.+|+||++||++++.+.
T Consensus 124 ----------g~~~Giit~~dil~~l~~~ 142 (144)
T 2nyc_A 124 ----------GRLVGVLTLSDILKYILLG 142 (144)
T ss_dssp ----------SBEEEEEEHHHHHHHHHHC
T ss_pred ----------CCEEEEEEHHHHHHHHHhc
Confidence 2346999999999998764
No 43
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.66 E-value=2.7e-16 Score=121.50 Aligned_cols=121 Identities=26% Similarity=0.360 Sum_probs=99.0
Q ss_pred ceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHH
Q 046022 28 AKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAH 107 (262)
Q Consensus 28 ~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~ 107 (262)
++|+|+|. ++++++++++|+.+|++.|.++++.++||+| + ++++|+|+..|++.+
T Consensus 1 m~v~~~m~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~----------------------~~~~G~it~~dl~~~ 55 (125)
T 1pbj_A 1 MRVEDVMV--TDVDTIDITASLEDVLRNYVENAKGSSVVVK-E----------------------GVRVGIVTTWDVLEA 55 (125)
T ss_dssp -CHHHHCB--CSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-T----------------------TEEEEEEEHHHHHHH
T ss_pred CCHHHhcC--CCceEECCCCcHHHHHHHHHHcCCCEEEEEe-C----------------------CeeEEEEeHHHHHHH
Confidence 46899995 3678999999999999999999999999999 4 589999999999987
Q ss_pred HhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecc
Q 046022 108 IAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVE 186 (262)
Q Consensus 108 l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~ 186 (262)
+..... ....+++++|.. + +.++.+++++.++++.|. ++++++||+.+ +++
T Consensus 56 ~~~~~~-------------~~~~~v~~~m~~---~--~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~---~~~------- 107 (125)
T 1pbj_A 56 IAEGDD-------------LAEVKVWEVMER---D--LVTISPRATIKEAAEKMVKNVVWRLLVEED---DEI------- 107 (125)
T ss_dssp HHHTCC-------------TTTSBHHHHCBC---G--GGEECTTSCHHHHHHHHHHHTCSEEEEEET---TEE-------
T ss_pred HhcCCc-------------ccccCHHHHcCC---C--CeEECCCCCHHHHHHHHHhcCCcEEEEEEC---CEE-------
Confidence 764211 124579999972 2 578999999999999998 79999999633 233
Q ss_pred cCCeeeEecHHHHHHHHHh
Q 046022 187 SASSYQMLTQMDLLRFMMN 205 (262)
Q Consensus 187 ~~~~~giITqsDIir~L~~ 205 (262)
+|+||++||++++.+
T Consensus 108 ----~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 108 ----IGVISATDILRAKMA 122 (125)
T ss_dssp ----EEEEEHHHHHHHHC-
T ss_pred ----EEEEEHHHHHHHHHh
Confidence 599999999998865
No 44
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.66 E-value=3.5e-16 Score=129.08 Aligned_cols=144 Identities=14% Similarity=0.273 Sum_probs=105.2
Q ss_pred HhhhcceeccccccCC--cEEEE--cCCCCHHHHHHHHHhCCCceEEEe--cCCCCcccCCCcccccccccccCcCCeEE
Q 046022 23 RLLREAKVRDLTAEKR--RIVEV--PHTASLAHTMNALVANKVVAVPVA--APPGQWIGAGGSMIMESDKQTGAVRKHYI 96 (262)
Q Consensus 23 ~~l~~~~v~dlm~~~~--~lv~v--~~~~tv~eA~~~L~~~~i~s~PVv--d~~~~~~~~~~~~~~~~d~~~~~~~~~~v 96 (262)
.++...+|+|+|.... +++++ ++++|+.+|++.|.++++.++||+ |++ ++++
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~----------------------~~lv 63 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRES----------------------QRLV 63 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTT----------------------CBEE
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCC----------------------CeEE
Confidence 5778899999996532 26778 999999999999999999999999 443 6899
Q ss_pred EEEeHHHHHHHHhCCC----CCCCC-----CC--CcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cC
Q 046022 97 GMLTMLDILAHIAGDD----QMNGS-----DD--APDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KG 164 (262)
Q Consensus 97 Givs~~Dil~~l~~~~----~l~~~-----~~--~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g 164 (262)
|+|+..|++.++.... .+... .. ...........+|+++|.. . +.++.+++++.+|+++|. ++
T Consensus 64 Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~---~--~~~v~~~~~l~~a~~~m~~~~ 138 (185)
T 2j9l_A 64 GFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDL---S--PFTVTDLTPMEIVVDIFRKLG 138 (185)
T ss_dssp EEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCCCTTCCCCEECGGGEES---S--CCEEETTSBHHHHHHHHHHHT
T ss_pred EEEEHHHHHHHHHhhcccCCCccccceeecccCCcccccccccCccHHHhhCc---C--CeEeCCCCCHHHHHHHHHhCC
Confidence 9999999998865310 00000 00 0000011234689999972 2 578999999999999998 79
Q ss_pred CCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 165 IHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 165 ~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
++++||+. + |+.+|+||++||++++.+..
T Consensus 139 ~~~l~Vvd-~-------------g~~vGiit~~dll~~l~~~~ 167 (185)
T 2j9l_A 139 LRQCLVTH-N-------------GRLLGIITKKDVLKHIAQMA 167 (185)
T ss_dssp CSEEEEEE-T-------------TEEEEEEEHHHHHHHHHHHC
T ss_pred CcEEEEEE-C-------------CEEEEEEEHHHHHHHHHHhh
Confidence 99999963 2 13359999999999998764
No 45
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.66 E-value=5.9e-16 Score=124.58 Aligned_cols=133 Identities=17% Similarity=0.271 Sum_probs=104.3
Q ss_pred HHHHhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEE
Q 046022 20 ENQRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGML 99 (262)
Q Consensus 20 ~~~~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGiv 99 (262)
...+.|.+.+|+++ ++++++++++|+.+|++.|.++++.++||+|.+ ++++|+|
T Consensus 15 ~~~~~l~~~~v~~~----~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~----------------------~~~vGiv 68 (152)
T 2uv4_A 15 FMSKSLEELQIGTY----ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK----------------------GRVVDIY 68 (152)
T ss_dssp HHTSBHHHHTCSBC----SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT----------------------SBEEEEE
T ss_pred HHHhhHHHccCCcc----CCceEeCCCCcHHHHHHHHHHcCCceEeEECCC----------------------CcEEEEE
Confidence 33567788889998 367799999999999999999999999999864 6899999
Q ss_pred eHHHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCC---CCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCC
Q 046022 100 TMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCP---EGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSR 175 (262)
Q Consensus 100 s~~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~---~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~ 175 (262)
+..|++.++..... .....++.++|.... .+ +.++.+++++.+|+++|. ++++++||+ ++.
T Consensus 69 t~~dl~~~~~~~~~------------~~~~~~v~~~m~~~~~~~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVv-d~~ 133 (152)
T 2uv4_A 69 SKFDVINLAAEKTY------------NNLDVSVTKALQHRSHYFEG--VLKCYLHETLETIINRLVEAEVHRLVVV-DEN 133 (152)
T ss_dssp EHHHHHHHHHCSSC------------CCTTSBGGGGGGTCCHHHHT--CSEECTTSBHHHHHHHHHHHTCSEEEEE-CTT
T ss_pred eHHHHHHHhcchhh------------hhhcchHHHHHhhhhcccCC--CeEECCCCcHHHHHHHHHHcCCeEEEEE-CCC
Confidence 99999988764210 012357888885100 12 578999999999999998 799999996 422
Q ss_pred CcccccceecccCCeeeEecHHHHHHHHHh
Q 046022 176 MENISGVELVESASSYQMLTQMDLLRFMMN 205 (262)
Q Consensus 176 ~~~~~g~~~~~~~~~~giITqsDIir~L~~ 205 (262)
|+.+|+||++||++++.+
T Consensus 134 ------------g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 134 ------------DVVKGIVSLSDILQALVL 151 (152)
T ss_dssp ------------SBEEEEEEHHHHHHHHC-
T ss_pred ------------CeEEEEEEHHHHHHHHHh
Confidence 234699999999998753
No 46
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.65 E-value=6.4e-16 Score=125.68 Aligned_cols=134 Identities=16% Similarity=0.231 Sum_probs=104.0
Q ss_pred hcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHH
Q 046022 26 REAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDIL 105 (262)
Q Consensus 26 ~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil 105 (262)
...+|+|+|.. +++++++++|+.+|++.|.++++.++||+|.+ ++++|+|+..||+
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~----------------------~~lvGivt~~dl~ 58 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDAN----------------------KKLLGIVSQRDLL 58 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT----------------------CBEEEEEEHHHHH
T ss_pred CcCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC----------------------CcEEEEEeHHHHH
Confidence 35689999953 67799999999999999999999999999864 6899999999999
Q ss_pred HHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCccccccee
Q 046022 106 AHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVEL 184 (262)
Q Consensus 106 ~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~ 184 (262)
.++.....- ...........++.++|.. + +.++.++++|.+|+++|. ++++++||+.+ +++
T Consensus 59 ~~~~~~~~~-----~~~~~~~~~~~~v~~im~~---~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---g~l----- 120 (160)
T 2o16_A 59 AAQESSLQR-----SAQGDSLAFETPLFEVMHT---D--VTSVAPQAGLKESAIYMQKHKIGCLPVVAK---DVL----- 120 (160)
T ss_dssp HHHHHHCC--------------CCCBHHHHSCS---C--EEEBCTTSBHHHHHHHHHHTTCSCEEEEET---TEE-----
T ss_pred HHHHHhhcc-----cccccchhcccCHHHHhcC---C--CeEECCCCCHHHHHHHHHHhCCCEEEEEEC---CEE-----
Confidence 887631000 0000011235689999972 3 689999999999999998 78999999633 233
Q ss_pred cccCCeeeEecHHHHHHHHHhhc
Q 046022 185 VESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 185 ~~~~~~~giITqsDIir~L~~~~ 207 (262)
+|+||.+||++++.+..
T Consensus 121 ------vGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 121 ------VGIITDSDFVTIAINLL 137 (160)
T ss_dssp ------EEEECHHHHHHHHHHHH
T ss_pred ------EEEEEHHHHHHHHHHHh
Confidence 59999999999988754
No 47
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.65 E-value=3e-16 Score=126.61 Aligned_cols=126 Identities=15% Similarity=0.236 Sum_probs=103.5
Q ss_pred ceeccccccC----CcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHH
Q 046022 28 AKVRDLTAEK----RRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLD 103 (262)
Q Consensus 28 ~~v~dlm~~~----~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~D 103 (262)
.+|+|+|..+ ++++++++++|+.+|++.|.++++.++||.+ + ++++|+|+..|
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~----------------------~~~~Givt~~d 63 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-G----------------------DDIAGIVTERD 63 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-S----------------------SSEEEEEEHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-C----------------------CEEEEEEEHHH
Confidence 4799999754 5688999999999999999999999999965 3 68999999999
Q ss_pred HHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 104 ILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 104 il~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
+++++..... .....+++++|.. . +.++.+++++.+|+++|. ++++++||+. + ++
T Consensus 64 l~~~~~~~~~------------~~~~~~v~~~m~~---~--~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~--g~---- 119 (157)
T 4fry_A 64 YARKVVLQER------------SSKATRVEEIMTA---K--VRYVEPSQSTDECMALMTEHRMRHLPVLD-G--GK---- 119 (157)
T ss_dssp HHHHSGGGTC------------CSSSCBHHHHSBS---S--CCCBCTTSBHHHHHHHHHHHTCSEEEEEE-T--TE----
T ss_pred HHHHHHhccC------------CccccCHHHHcCC---C--CcEECCCCcHHHHHHHHHHcCCCEEEEEE-C--CE----
Confidence 9998764210 1124589999973 2 578999999999999998 6999999963 2 13
Q ss_pred eecccCCeeeEecHHHHHHHHHhhc
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
.+|+||++||++++....
T Consensus 120 -------~~Giit~~dil~~l~~~~ 137 (157)
T 4fry_A 120 -------LIGLISIGDLVKSVIADQ 137 (157)
T ss_dssp -------EEEEEEHHHHHHHHHTTC
T ss_pred -------EEEEEEHHHHHHHHHHHH
Confidence 359999999999998765
No 48
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.64 E-value=1.5e-15 Score=122.84 Aligned_cols=139 Identities=13% Similarity=0.205 Sum_probs=103.0
Q ss_pred hhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCce-EEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHH
Q 046022 25 LREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVA-VPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLD 103 (262)
Q Consensus 25 l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s-~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~D 103 (262)
....+|+|+|. ++++++++++|+.+|++.|.++++.+ +||+|. ++++|+|+..|
T Consensus 13 ~~~~~v~~im~--~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~-----------------------~~~vGivt~~d 67 (157)
T 1o50_A 13 MKVKDVCKLIS--LKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD-----------------------NKLVGMIPVMH 67 (157)
T ss_dssp CBHHHHTTSSC--CCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET-----------------------TEEEEEEEHHH
T ss_pred hccccHhhccc--CCCceECCCCCHHHHHHHHHhCCCCccEEEEEC-----------------------CEEEEEEEHHH
Confidence 35668999995 47889999999999999999999999 999985 38999999999
Q ss_pred HHHHHhCC--CCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccc
Q 046022 104 ILAHIAGD--DQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENIS 180 (262)
Q Consensus 104 il~~l~~~--~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~ 180 (262)
|++++... ..+................++.++|.. +.++.+++++.+|+++|. ++++++||+ +++
T Consensus 68 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~v~~~~~l~~a~~~m~~~~~~~lpVv-d~~----- 135 (157)
T 1o50_A 68 LLKVSGFHFFGFIPKEELIRSSMKRLIAKNASEIMLD------PVYVHMDTPLEEALKLMIDNNIQEMPVV-DEK----- 135 (157)
T ss_dssp HHHHHHHHHHCCCC-------CCCCCSSCBHHHHCBC------CCCBCTTSBHHHHHHHHHHHTCSEEEEE-CTT-----
T ss_pred HHHHHhhhHHhhhccHHHHHHHHHHHcCCcHHHHcCC------CeEECCCCCHHHHHHHHHHCCCcEEEEE-cCC-----
Confidence 99875410 000000000000011235689999972 367999999999999998 799999996 422
Q ss_pred cceecccCCeeeEecHHHHHHHHHhhc
Q 046022 181 GVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 181 g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
++.+|+||++||++++.+..
T Consensus 136 -------g~~vGiit~~dll~~l~~~~ 155 (157)
T 1o50_A 136 -------GEIVGDLNSLEILLALWKGR 155 (157)
T ss_dssp -------SCEEEEEEHHHHHHHHHHSC
T ss_pred -------CEEEEEEEHHHHHHHHHHhh
Confidence 23469999999999997653
No 49
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.62 E-value=1.8e-15 Score=122.21 Aligned_cols=138 Identities=9% Similarity=0.189 Sum_probs=103.5
Q ss_pred hhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHH
Q 046022 25 LREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDI 104 (262)
Q Consensus 25 l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Di 104 (262)
+...+|+|+|. ++++++++++|+.+|++.|.++++.++||+|.+. .++++|+|+..||
T Consensus 10 ~~~~~v~dim~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~--------------------~~~~~Givt~~dl 67 (164)
T 2pfi_A 10 SHHVRVEHFMN--HSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTE--------------------SQILVGIVQRAQL 67 (164)
T ss_dssp CCSCBHHHHCB--CCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTT--------------------TCBEEEEEEHHHH
T ss_pred ccCCCHHHHcC--CCCeEECCCCcHHHHHHHHHhCCCCceeEEecCC--------------------CCEEEEEEEHHHH
Confidence 45688999995 3678999999999999999999999999998610 1689999999999
Q ss_pred HHHHhCCCCCCCCCCCcchHHhhhccccccccccCC-CCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 105 LAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCP-EGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 105 l~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~-~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
+.++...... .......++.++|.... ..+.+.++.+++++.+|+++|. ++++++||+. ++
T Consensus 68 ~~~~~~~~~~---------~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g------- 130 (164)
T 2pfi_A 68 VQALQAEPPS---------RAPGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RG------- 130 (164)
T ss_dssp HHHHHC----------------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TT-------
T ss_pred HHHHHhhccc---------cCCcccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CC-------
Confidence 9887642110 00012346888886320 0111367999999999999998 7999999964 21
Q ss_pred eecccCCeeeEecHHHHHHHHHhhc
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
+.+|+||++||++++.+..
T Consensus 131 ------~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 131 ------RAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp ------EEEEEEEHHHHHHHHHHHH
T ss_pred ------EEEEEEEHHHHHHHHHhhh
Confidence 2359999999999998754
No 50
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.62 E-value=1.6e-15 Score=126.04 Aligned_cols=125 Identities=15% Similarity=0.266 Sum_probs=102.7
Q ss_pred cceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHH
Q 046022 27 EAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILA 106 (262)
Q Consensus 27 ~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~ 106 (262)
..+|+|+|. ++++++++++|+.+|++.|.++++.++||++.+ ++++|+|+..||+.
T Consensus 8 ~~~v~~im~--~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~----------------------g~~vGivt~~dl~~ 63 (184)
T 1pvm_A 8 FMRVEKIMN--SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN----------------------GNDVGLLSERSIIK 63 (184)
T ss_dssp CCBGGGTSB--TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTT----------------------SCEEEEEEHHHHHH
T ss_pred ccCHHHhcC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC----------------------CcEEEEEeHHHHHH
Confidence 478999995 478899999999999999999999999999864 58999999999998
Q ss_pred HHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceec
Q 046022 107 HIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELV 185 (262)
Q Consensus 107 ~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~ 185 (262)
++..... .....+++++|.. . +.++.+++++.+|+++|. ++++++||+ ++.
T Consensus 64 ~~~~~~~------------~~~~~~v~~im~~---~--~~~v~~~~~l~~a~~~m~~~~~~~lpVv-d~~---------- 115 (184)
T 1pvm_A 64 RFIPRNK------------KPDEVPIRLVMRK---P--IPKVKSDYDVKDVAAYLSENGLERCAVV-DDP---------- 115 (184)
T ss_dssp HTGGGCC------------CGGGSBGGGTSBS---S--CCEEETTCBHHHHHHHHHHHTCSEEEEE-CTT----------
T ss_pred HHhhccc------------CcccCCHHHHhCC---C--CcEECCCCCHHHHHHHHHHcCCcEEEEE-cCC----------
Confidence 8763110 1224589999973 2 578999999999999998 699999996 432
Q ss_pred ccCCeeeEecHHHHHHHHHh
Q 046022 186 ESASSYQMLTQMDLLRFMMN 205 (262)
Q Consensus 186 ~~~~~~giITqsDIir~L~~ 205 (262)
++.+|+||+.||++++..
T Consensus 116 --g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 116 --GRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp --CCEEEEEEHHHHTTTSCH
T ss_pred --CeEEEEEEHHHHHHHHHh
Confidence 234699999999998766
No 51
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.62 E-value=2.8e-16 Score=123.09 Aligned_cols=125 Identities=18% Similarity=0.311 Sum_probs=98.4
Q ss_pred hhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHH
Q 046022 25 LREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDI 104 (262)
Q Consensus 25 l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Di 104 (262)
+.-.+|+|+|.. +++++++++|+.+|++.|.++++.++||+|++ ++++|+|+..|+
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----------------------~~~~Givt~~dl 60 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDD----------------------DRLHGMLTDRDI 60 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGG----------------------GBEEEEEEHHHH
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCC----------------------CeEEEEEeHHHH
Confidence 344689999963 67789999999999999999999999999754 689999999999
Q ss_pred HH-HHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccc
Q 046022 105 LA-HIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 105 l~-~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~ 182 (262)
+. ++..... ....+++++|.. . +.++.+++++.+|++.|. ++.+++||+.+ + ++
T Consensus 61 ~~~~~~~~~~-------------~~~~~v~~~m~~---~--~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g--~~--- 116 (133)
T 1y5h_A 61 VIKGLAAGLD-------------PNTATAGELARD---S--IYYVDANASIQEMLNVMEEHQVRRVPVISE-H--RL--- 116 (133)
T ss_dssp HHTTGGGTCC-------------TTTSBHHHHHTT---C--CCCEETTCCHHHHHHHHHHHTCSEEEEEET-T--EE---
T ss_pred HHHHHhcCCC-------------ccccCHHHHhcC---C--CEEECCCCCHHHHHHHHHHcCCCEEEEEEC-C--EE---
Confidence 84 4443110 123589999973 2 578999999999999998 79999999643 1 33
Q ss_pred eecccCCeeeEecHHHHHHHHHh
Q 046022 183 ELVESASSYQMLTQMDLLRFMMN 205 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~ 205 (262)
+|+||++||++++.+
T Consensus 117 --------~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 117 --------VGIVTEADIARHLPE 131 (133)
T ss_dssp --------EEEEEHHHHHHTCC-
T ss_pred --------EEEEEHHHHHHHHHh
Confidence 599999999998754
No 52
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.59 E-value=7.4e-15 Score=129.30 Aligned_cols=63 Identities=14% Similarity=0.307 Sum_probs=55.1
Q ss_pred hhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHH
Q 046022 25 LREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDI 104 (262)
Q Consensus 25 l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Di 104 (262)
..+++|+|+|. ++++++.+++++.+|.++|.++++.++||++..+ .++++|+|+..||
T Consensus 10 ~~~~~v~diMt--~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~--------------------~~~LvGiIt~~dl 67 (250)
T 2d4z_A 10 KYNIQVGDIMV--RDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPD--------------------TNTLLGSIDRTEV 67 (250)
T ss_dssp CSSCBTTSSSB--SSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTT--------------------TCBEEEEEEHHHH
T ss_pred cCCCChHHhcC--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCC--------------------CCeEEEEEEHHHH
Confidence 45788999995 4789999999999999999999999999998642 1589999999999
Q ss_pred HHHHh
Q 046022 105 LAHIA 109 (262)
Q Consensus 105 l~~l~ 109 (262)
++++.
T Consensus 68 ~~~l~ 72 (250)
T 2d4z_A 68 EGLLQ 72 (250)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98654
No 53
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.56 E-value=1.7e-14 Score=122.88 Aligned_cols=130 Identities=16% Similarity=0.186 Sum_probs=104.2
Q ss_pred chHHHHHhh--hcceeccccccCCcEEEEcCCCCHHHHHHHHHhC---CCceEEEecCCCCcccCCCcccccccccccCc
Q 046022 17 AADENQRLL--REAKVRDLTAEKRRIVEVPHTASLAHTMNALVAN---KVVAVPVAAPPGQWIGAGGSMIMESDKQTGAV 91 (262)
Q Consensus 17 ~~~~~~~~l--~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~---~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~ 91 (262)
....+++.| .+.+|+++|. ++++++++++|+.+|++.|.++ ++..+||+|..
T Consensus 41 e~~~i~~~l~~~~~~v~~iM~--~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~--------------------- 97 (205)
T 3kxr_A 41 QRQRFELYDQYSENEIGRYTD--HQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEA--------------------- 97 (205)
T ss_dssp HHHHHHHHHHSCTTCGGGGCB--CCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTT---------------------
T ss_pred HHHHHHHHhCCCcchHHhhcc--CceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCC---------------------
Confidence 334444433 5568999995 4788999999999999999998 89999999864
Q ss_pred CCeEEEEEeHHHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEe
Q 046022 92 RKHYIGMLTMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALV 170 (262)
Q Consensus 92 ~~~~vGivs~~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V 170 (262)
++++|+|+..|++... ...+|+++|.. + +.++.+++++.+|+++|. ++++++||
T Consensus 98 -~~lvGivt~~dll~~~-------------------~~~~v~~im~~---~--~~~v~~~~~l~~a~~~m~~~~~~~lpV 152 (205)
T 3kxr_A 98 -DKYLGTVRRYDIFKHE-------------------PHEPLISLLSE---D--SRALTANTTLLDAAEAIEHSREIELPV 152 (205)
T ss_dssp -CBEEEEEEHHHHTTSC-------------------TTSBGGGGCCS---S--CCCEETTSCHHHHHHHHHTSSCSEEEE
T ss_pred -CeEEEEEEHHHHHhCC-------------------CcchHHHHhcC---C--CeEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 6899999999976421 13479999972 3 578999999999999998 79999999
Q ss_pred ecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 171 PMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 171 ~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
+ ++. |+.+||||..||++.+.+..
T Consensus 153 V-D~~------------g~lvGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 153 I-DDA------------GELIGRVTLRAATALVREHY 176 (205)
T ss_dssp E-CTT------------SBEEEEEEHHHHHHHHHHHH
T ss_pred E-cCC------------CeEEEEEEHHHHHHHHHHHH
Confidence 6 422 23469999999999998754
No 54
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.54 E-value=1.3e-13 Score=119.38 Aligned_cols=193 Identities=19% Similarity=0.210 Sum_probs=120.5
Q ss_pred cceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHH
Q 046022 27 EAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILA 106 (262)
Q Consensus 27 ~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~ 106 (262)
..+|+|+|.. +++++++++++.+|++.|.++++.++||+|++ ++++|++|..|+++
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~----------------------~~l~Giit~~di~~ 61 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN----------------------NHLLGMLSTSNITA 61 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT----------------------CBEEEEEEHHHHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC----------------------CEEEEEEEHHHHHH
Confidence 4689999953 56799999999999999999999999999965 68999999999999
Q ss_pred HHhCCCCCCC---CCCCcchHHhhh------------------------ccccccccccCCCCCeeEEeCCCCCHHHHHH
Q 046022 107 HIAGDDQMNG---SDDAPDDLDKKM------------------------SAPVSSIIGHCPEGLSLWTLSPNTSILDCME 159 (262)
Q Consensus 107 ~l~~~~~l~~---~~~~~~~~~~~~------------------------~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~ 159 (262)
++........ ......++.+.+ ...+.+.+. .+. ++.+.. -.++.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~---~~~-ivIvgd---r~~~~~ 134 (245)
T 3l2b_A 62 TYMDIWDSNILAKSATSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFIS---EGD-IAIAGD---RAEIQA 134 (245)
T ss_dssp HHHCCCCTTHHHHTTCCHHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCC---TTC-EEEECS---CHHHHH
T ss_pred HHHHhhhhhhhhhccCCHHHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCC---CCC-EEEECC---CHHHHH
Confidence 8875211000 000000000000 111222222 122 333322 256666
Q ss_pred HHh-cCCCeeEeecCCCCc-ccccceecccCCeeeEecHHHHHHHHHhhcccchhhhccccchhcccC-cCeEEEeCCCc
Q 046022 160 VFS-KGIHRALVPMDSRME-NISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGALN-ENVFAITESTK 236 (262)
Q Consensus 160 ~m~-~g~~rv~V~~~~~~~-~~~g~~~~~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~~~-~~v~tv~~~~~ 236 (262)
.+. +|+..+++..+.... .+. .+........+.|..|.......-. ...++++ +|+ +++++++++++
T Consensus 135 ~~i~~~~~~liit~~~~~~~~v~--~~a~~~~~~~i~t~~d~~~~~~~~~------~~~~v~~--im~~~~~~~~~~~~~ 204 (245)
T 3l2b_A 135 ELIELKVSLLIVTGGHTPSKEII--ELAKKNNITVITTPHDSFTASRLIV------QSLPVDY--VMTKDNLVAVSTDDL 204 (245)
T ss_dssp HHHHTTCSEEEECTTCCCCHHHH--HHHHHHTCEEEECSSCHHHHHHHGG------GGSBHHH--HSBCTTCCCEETTSB
T ss_pred HHHHcCCCEEEECCCCCCCHHHH--HHHHHcCCeEEEeCCChHHHHHHHh------cCCceee--EecCCccEEECCCCc
Confidence 554 788877664221110 000 0001112234666666544322111 1356777 498 89999999999
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 237 VIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 237 ~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
+.+|+++|.+++++++||||++|.
T Consensus 205 ~~~~~~~m~~~~~~~~pVvd~~~~ 228 (245)
T 3l2b_A 205 VEDVKVTMSETRYSNYPVIDENNK 228 (245)
T ss_dssp HHHHHHHHHHHCCSEEEEECTTCB
T ss_pred HHHHHHHHHhcCCceEEEEcCCCe
Confidence 999999999999999999998774
No 55
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.50 E-value=5e-14 Score=135.94 Aligned_cols=131 Identities=11% Similarity=0.187 Sum_probs=102.8
Q ss_pred hhcceeccccccCCcEEEEcCC-CCHHHHHHHHHhCCCceEEEec-CCCCcccCCCcccccccccccCcCCeEEEEEeHH
Q 046022 25 LREAKVRDLTAEKRRIVEVPHT-ASLAHTMNALVANKVVAVPVAA-PPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTML 102 (262)
Q Consensus 25 l~~~~v~dlm~~~~~lv~v~~~-~tv~eA~~~L~~~~i~s~PVvd-~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~ 102 (262)
|...+|+|+|. +++++++++ +|+.+|++.|.++++.++||+| ++ ++++|+||..
T Consensus 381 l~~~~V~diM~--~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~----------------------g~lvGiVt~~ 436 (527)
T 3pc3_A 381 WWSLAIAELEL--PAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDD----------------------GSVLGVVGQE 436 (527)
T ss_dssp TTTSBGGGGCC--CCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTT----------------------CCEEEEEEHH
T ss_pred ccCCcHHHhCc--CCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCC----------------------CEEEEEEEHH
Confidence 45688999995 477899999 9999999999999999999998 43 6899999999
Q ss_pred HHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHhcCCCeeEeecCCCCcccccc
Q 046022 103 DILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFSKGIHRALVPMDSRMENISGV 182 (262)
Q Consensus 103 Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~~g~~rv~V~~~~~~~~~~g~ 182 (262)
||++++.... .....+|+++|.. + +.++.++++|.+++++|.+. +-+||+.++..
T Consensus 437 Dll~~l~~~~-------------~~~~~~V~~im~~---~--~~~v~~~~~l~~a~~~m~~~-~~~pVVd~~~~------ 491 (527)
T 3pc3_A 437 TLITQIVSMN-------------RQQSDPAIKALNK---R--VIRLNESEILGKLARVLEVD-PSVLILGKNPA------ 491 (527)
T ss_dssp HHHHHHHHHC-------------CCTTSBGGGGEET---T--CCEEETTSBHHHHHHHHTTC-SEEEEEEECSS------
T ss_pred HHHHHHHhcc-------------CcCCCcHHHHhcC---C--CeEECCCCcHHHHHHHHhhC-CEEEEEeCCcc------
Confidence 9999887421 1224589999973 3 67899999999999999732 33577543210
Q ss_pred eecccCCeeeEecHHHHHHHHHhhc
Q 046022 183 ELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 183 ~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..++.+||||++||++++.++.
T Consensus 492 ---~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 492 ---GKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp ---SCEEEEEEEEHHHHHHHHHTCC
T ss_pred ---cCCeEEEEEEHHHHHHHHHhcc
Confidence 0134469999999999998864
No 56
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.48 E-value=7e-14 Score=113.93 Aligned_cols=116 Identities=11% Similarity=0.171 Sum_probs=94.2
Q ss_pred HhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHH
Q 046022 125 DKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFM 203 (262)
Q Consensus 125 ~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L 203 (262)
+..+..++.++|.. .++ +.++.+++|+.+|+.+|. +|++++||+ ++. ++.+|+||..|+++++
T Consensus 10 e~~l~~~~~~iM~P-~~~--v~~v~~~~t~~~a~~~m~~~~~s~~pVv-d~~------------~~lvGiit~~Di~~~~ 73 (156)
T 3k6e_A 10 ETFLLGQEETFLTP-AKN--LAVLIDTHNADHATLLLSQMTYTRVPVV-TDE------------KQFVGTIGLRDIMAYQ 73 (156)
T ss_dssp HHHHHTTGGGGEEE-TTS--SCCEETTSBHHHHHHHHTTSSSSEEEEE-CC-------------CBEEEEEEHHHHHHHH
T ss_pred HHHhhccHHHhCcc-hhH--eEEECCcCCHHHHHHHHHHcCCcEEEEE-cCC------------CcEEEEEEecchhhhh
Confidence 34556789999973 234 688999999999999999 799999996 432 2345999999999999
Q ss_pred HhhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 204 MNHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 204 ~~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
.........+...++++ +|+++++++++++++.+|+++|.++++ +||||++|.
T Consensus 74 ~~~~~~~~~~~~~~v~~--im~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~ 126 (156)
T 3k6e_A 74 MEHDLSQEIMADTDIVH--MTKTDVAVVSPDFTITEVLHKLVDESF--LPVVDAEGI 126 (156)
T ss_dssp HHHTCCHHHHTTSBGGG--TCBCSCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSB
T ss_pred hhcccccccccccCHHH--hhcCCceecccccHHHHHHHHHHHcCC--eEEEecCCE
Confidence 87643334455678887 499999999999999999999998876 999999874
No 57
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.48 E-value=8.2e-14 Score=124.41 Aligned_cols=128 Identities=14% Similarity=0.231 Sum_probs=102.9
Q ss_pred HHHHHhh--hcceeccccccCCcEEEEcCCCCHHHHHHHHHhC-----CCceEEEecCCCCcccCCCcccccccccccCc
Q 046022 19 DENQRLL--REAKVRDLTAEKRRIVEVPHTASLAHTMNALVAN-----KVVAVPVAAPPGQWIGAGGSMIMESDKQTGAV 91 (262)
Q Consensus 19 ~~~~~~l--~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~-----~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~ 91 (262)
..++..+ .+.+|+++|. ++++++++++|+.+|++.|.++ ++.++||+|.+
T Consensus 126 ~~i~~ll~~~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~--------------------- 182 (286)
T 2oux_A 126 GEIKELLHYEDETAGAIMT--TEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQE--------------------- 182 (286)
T ss_dssp HHHHHHTTSCTTBHHHHCB--SCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTT---------------------
T ss_pred HHHHHHhcCChHHHHHhCC--CCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCC---------------------
Confidence 3344444 4568999995 4788999999999999999998 88889999864
Q ss_pred CCeEEEEEeHHHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEe
Q 046022 92 RKHYIGMLTMLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALV 170 (262)
Q Consensus 92 ~~~~vGivs~~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V 170 (262)
++++|+|+..|++... ...+|+++|.. + +.++.+++++.+|+.+|. ++++++||
T Consensus 183 -~~lvGivt~~dll~~~-------------------~~~~v~~im~~---~--~~~v~~~~~l~ea~~~m~~~~~~~lpV 237 (286)
T 2oux_A 183 -NHLVGVISLRDLIVND-------------------DDTLIADILNE---R--VISVHVGDDQEDVAQTIRDYDFLAVPV 237 (286)
T ss_dssp -CBEEEEEEHHHHTTSC-------------------TTSBHHHHSBS---C--CCCEETTSBHHHHHHHHHHHTCSEEEE
T ss_pred -CeEEEEEEHHHHHcCC-------------------CCCcHHHHcCC---C--CeeecCCCCHHHHHHHHHHcCCcEEEE
Confidence 6899999999987531 12479999972 3 578999999999999998 79999999
Q ss_pred ecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 171 PMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 171 ~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
+ ++. |+.+|+||..||++++....
T Consensus 238 V-d~~------------g~lvGiIT~~Dil~~i~~e~ 261 (286)
T 2oux_A 238 T-DYD------------DHLLGIVTVDDIIDVIDDEA 261 (286)
T ss_dssp E-CTT------------CBEEEEEEHHHHHHHHHHHH
T ss_pred E-cCC------------CeEEEEEEHHHHHHHHHHHh
Confidence 6 422 23469999999999987653
No 58
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.47 E-value=3.6e-14 Score=116.36 Aligned_cols=109 Identities=17% Similarity=0.201 Sum_probs=86.5
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|+. + ++++.+++++.+|+++|. ++++++||+ +++ |+.+|+||.+||++++....
T Consensus 17 ~~~V~diM~~---~--v~~v~~~~tl~~a~~~m~~~~~~~~pVv-d~~------------g~lvGiit~~Dll~~~~~~~ 78 (170)
T 4esy_A 17 QVPIRDILTS---P--VVTVREDDTLDAVAKTMLEHQIGCAPVV-DQN------------GHLVGIITESDFLRGSIPFW 78 (170)
T ss_dssp TSBGGGGCCS---C--CCCEETTSBHHHHHHHHHHTTCSEEEEE-CTT------------SCEEEEEEGGGGGGGTCCTT
T ss_pred CCCHHHhcCC---C--CcEECCcCcHHHHHHHHHHcCCeEEEEE-cCC------------ccEEEEEEHHHHHHHHhhcc
Confidence 5699999972 3 688999999999999998 799999996 422 34569999999987643221
Q ss_pred c------------------cchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcC
Q 046022 208 S------------------ELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKS 257 (262)
Q Consensus 208 ~------------------~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~ 257 (262)
. ........++++ +|+++++++++++++.+|+++|.+++++++||||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~ 144 (170)
T 4esy_A 79 IYEASEILSRAIPAPEVEHLFETGRKLTASA--VMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD 144 (170)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHHHTTCBHHH--HCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET
T ss_pred ccchhhhhhhccchhhHHhhhccccccchhh--hcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC
Confidence 0 011223446676 59999999999999999999999999999999984
No 59
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.45 E-value=2.5e-13 Score=120.47 Aligned_cols=121 Identities=15% Similarity=0.171 Sum_probs=97.7
Q ss_pred hcceeccccccCCcEEEEcCCCCHHHHHHHHHhC-----CCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEe
Q 046022 26 REAKVRDLTAEKRRIVEVPHTASLAHTMNALVAN-----KVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLT 100 (262)
Q Consensus 26 ~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~-----~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs 100 (262)
...+++++|. ++++++++++|+.+|++.|.++ ++.++||+|.. ++++|+|+
T Consensus 133 ~~~~v~~iM~--~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~----------------------~~lvGivt 188 (278)
T 2yvy_A 133 EEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK----------------------GRLKGVLS 188 (278)
T ss_dssp CTTBGGGTCB--SCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTT----------------------CBEEEEEE
T ss_pred CcchHHhhcC--CCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCC----------------------CCEEEEEE
Confidence 4578999995 4788999999999999999987 79999999864 68999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCccc
Q 046022 101 MLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENI 179 (262)
Q Consensus 101 ~~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~ 179 (262)
..|++... ...+|+++|.. + ++++.+++++.+|++.|. ++.+++||+ ++.
T Consensus 189 ~~dll~~~-------------------~~~~v~~im~~---~--~~~v~~~~~l~~a~~~m~~~~~~~lpVv-d~~---- 239 (278)
T 2yvy_A 189 LRDLIVAD-------------------PRTRVAEIMNP---K--VVYVRTDTDQEEVARLMADYDFTVLPVV-DEE---- 239 (278)
T ss_dssp HHHHHHSC-------------------TTCBSTTTSBS---S--CCCEETTSBHHHHHHHHHHHTCSEEEEE-CTT----
T ss_pred HHHHhcCC-------------------CCCcHHHHhCC---C--CeEEeCCCCHHHHHHHHHhcCCCEEEEE-eCC----
Confidence 99988531 12479999962 3 578999999999999998 799999996 422
Q ss_pred ccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 180 SGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 180 ~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
|+.+||||..||++++....
T Consensus 240 --------g~lvGivT~~Dil~~i~~e~ 259 (278)
T 2yvy_A 240 --------GRLVGIVTVDDVLDVLEAEA 259 (278)
T ss_dssp --------SBEEEEEEHHHHHHHC----
T ss_pred --------CeEEEEEEHHHHHHHHHHHh
Confidence 23469999999999887653
No 60
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.42 E-value=1.5e-12 Score=103.93 Aligned_cols=107 Identities=16% Similarity=0.233 Sum_probs=88.5
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|.. ..+ +.++.+++++.+|+++|. ++++++||+ +++. ++.+|+||..|+++++....
T Consensus 22 ~~~v~diM~~-~~~--~~~v~~~~~~~~a~~~m~~~~~~~~pVv-d~~~-----------~~lvGivt~~dl~~~~~~~~ 86 (148)
T 3lv9_A 22 EKKIREIMVP-RTD--MVCIYESDSEEKILAILKEEGVTRYPVC-RKNK-----------DDILGFVHIRDLYNQKINEN 86 (148)
T ss_dssp TCBGGGTSEE-TTT--CCCEETTCCHHHHHHHHHHSCCSEEEEE-SSST-----------TSEEEEEEHHHHHHHHHHHS
T ss_pred CCCHHHcccc-HHH--eEEECCCCCHHHHHHHHHHCCCCEEEEE-cCCC-----------CcEEEEEEHHHHHHHHhcCC
Confidence 4689999973 123 578999999999999998 799999996 4321 23469999999999887642
Q ss_pred ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 208 SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 208 ~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
..+++++ | ++++++++++++.+|+++|.++++..+||||++|.
T Consensus 87 -------~~~v~~~--m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~ 129 (148)
T 3lv9_A 87 -------KIELEEI--L-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGG 129 (148)
T ss_dssp -------CCCGGGT--C-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSS
T ss_pred -------CccHHHh--c-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCC
Confidence 4567774 7 88999999999999999999999999999998774
No 61
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.39 E-value=1.2e-12 Score=102.31 Aligned_cols=108 Identities=11% Similarity=0.245 Sum_probs=86.6
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|.. ... +.++.+++++.+|+++|. ++++++||+ +++. ++.+|+||..|+++++....
T Consensus 5 ~~~v~~iM~~-~~~--v~~v~~~~~~~~a~~~m~~~~~~~~pVv-d~~~-----------~~~~Givt~~dl~~~~~~~~ 69 (130)
T 3i8n_A 5 DVPVTQVMTP-RPV--VFRVDATMTINEFLDKHKDTPFSRPLVY-SEQK-----------DNIIGFVHRLELFKMQQSGS 69 (130)
T ss_dssp --CCTTTSCC-BCC--CCEEETTSBHHHHHHHTTTCSCSCCEEE-SSST-----------TCEEEECCHHHHHHHHHTTT
T ss_pred cCCHhhCCCc-HHH--EEEEcCCCCHHHHHHHHHhCCCCEEEEE-eCCC-----------CcEEEEEEHHHHHHHHhcCC
Confidence 3579999973 222 578999999999999998 689999996 4321 23469999999999887642
Q ss_pred ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 208 SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 208 ~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
...+++++ | ++++++++++++.+|+++|.++++..+||+|++|.
T Consensus 70 ------~~~~v~~~--m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~ 113 (130)
T 3i8n_A 70 ------GQKQLGAV--M-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGT 113 (130)
T ss_dssp ------TTSBHHHH--S-EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSC
T ss_pred ------CcCCHHHH--h-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCC
Confidence 24567775 6 56899999999999999999999999999998875
No 62
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.38 E-value=3.1e-12 Score=101.04 Aligned_cols=109 Identities=15% Similarity=0.194 Sum_probs=87.6
Q ss_pred hccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhh
Q 046022 128 MSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 128 ~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~ 206 (262)
+..+|+++|.. . +.++.+++++.+|+++|. ++++++||+.+++.. +.+|+||..|+++++...
T Consensus 3 ~~~~v~~im~~---~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~-----------~~~Givt~~dl~~~~~~~ 66 (141)
T 2rih_A 3 MAIRTSELLKR---P--PVSLPETATIREVATELAKNRVGLAVLTARDNPK-----------RPVAVVSERDILRAVAQR 66 (141)
T ss_dssp --CBGGGGCCS---C--CEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEE-----------EEEEEEEHHHHHHHHHTT
T ss_pred cceEHHHHhcC---C--CeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcc-----------eeEEEEEHHHHHHHHhcC
Confidence 34689999972 3 688999999999999998 699999996432110 345999999999988754
Q ss_pred cccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 207 ASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 207 ~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
.. ...++++ +|++++++++++ ++.+|+++|.+++++.+||||++|.
T Consensus 67 ~~-----~~~~v~~--~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~ 112 (141)
T 2rih_A 67 LD-----LDGPAMP--IANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGE 112 (141)
T ss_dssp CC-----TTSBSGG--GCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSC
T ss_pred CC-----CCCCHHH--HcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCc
Confidence 21 2467777 488899999999 9999999999999999999998764
No 63
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.37 E-value=1e-12 Score=103.07 Aligned_cols=109 Identities=12% Similarity=0.164 Sum_probs=86.1
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcc
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHAS 208 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~ 208 (262)
.+|+++|.. ..+ +.++.+++++.+|+++|. ++++++||+ +++. ++.+|+||..||++++.....
T Consensus 2 ~~v~~iM~~-~~~--~~~v~~~~~v~~a~~~m~~~~~~~~pVv-~~~~-----------~~lvGivt~~dl~~~~~~~~~ 66 (130)
T 3hf7_A 2 VSVNDIMVP-RNE--IVGIDINDDWKSIVRQLTHSPHGRIVLY-RDSL-----------DDAISMLRVREAYRLMTEKKE 66 (130)
T ss_dssp CBHHHHSEE-GGG--CCEEETTSCHHHHHHHHHTCSSSEEEEE-SSSG-----------GGEEEEEEHHHHHHHHTSSSC
T ss_pred cCHHHhCcc-HHH--EEEEcCCCCHHHHHHHHHHCCCCeEEEE-cCCC-----------CcEEEEEEHHHHHHHHhccCc
Confidence 368999962 123 678999999999999998 689999996 3221 234599999999998865321
Q ss_pred cchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 209 ELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 209 ~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
+...+++++ | ++++++++++++.+|+++|.++++..+||+|++|.
T Consensus 67 ----~~~~~v~~~--m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~ 111 (130)
T 3hf7_A 67 ----FTKEIMLRA--A-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGD 111 (130)
T ss_dssp ----CCHHHHHHH--S-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSC
T ss_pred ----cchhhHHHh--c-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCC
Confidence 113456664 6 67899999999999999999999999999998874
No 64
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.37 E-value=2.6e-12 Score=105.63 Aligned_cols=107 Identities=14% Similarity=0.135 Sum_probs=87.2
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|.. ..+ +.++.+++++.+|+++|. ++++++||+ +++. ++++|+||..||++++....
T Consensus 41 ~~~v~diM~~-~~~--~~~v~~~~~v~~a~~~m~~~~~~~~pVv-d~~~-----------~~lvGivt~~dl~~~~~~~~ 105 (172)
T 3lhh_A 41 ERTISSLMVP-RSD--IVFLDLNLPLDANLRTVMQSPHSRFPVC-RNNV-----------DDMVGIISAKQLLSESIAGE 105 (172)
T ss_dssp --CTTTTSEE-GGG--CCCEETTSCHHHHHHHHHTCCCSEEEEE-SSST-----------TSEEEEEEHHHHHHHHHTTC
T ss_pred CCCHHHhCcc-HHH--eEEEcCCCCHHHHHHHHHhCCCCEEEEE-eCCC-----------CeEEEEEEHHHHHHHHhhcC
Confidence 5689999972 123 578999999999999998 689999996 4321 23469999999999886541
Q ss_pred ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 208 SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 208 ~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
..+++++ | ++++++.+++++.+|+++|.++++..+||||++|.
T Consensus 106 -------~~~v~~i--m-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~ 148 (172)
T 3lhh_A 106 -------RLELVDL--V-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGD 148 (172)
T ss_dssp -------CCCGGGG--C-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSC
T ss_pred -------cccHHHH--h-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCC
Confidence 4577874 8 88999999999999999999999999999998774
No 65
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.37 E-value=1.5e-12 Score=104.58 Aligned_cols=115 Identities=11% Similarity=0.163 Sum_probs=91.2
Q ss_pred hhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHH
Q 046022 126 KKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMM 204 (262)
Q Consensus 126 ~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~ 204 (262)
..+..+|+++|... ++ +.++.+++++.+|+++|. ++++++||+ +++ ++.+|+||..||++++.
T Consensus 11 ~l~~~~v~dim~p~-~~--~~~v~~~~~l~~a~~~m~~~~~~~~~Vv-d~~------------~~~~Giit~~dl~~~~~ 74 (156)
T 3ctu_A 11 TFLLGQEETFLTPA-KN--LAVLIDTHNADHATLLLSQMTYTRVPVV-TDE------------KQFVGTIGLRDIMAYQM 74 (156)
T ss_dssp HHHHTTGGGGEEEG-GG--CCCEETTSBHHHHHHHHTTCSSSEEEEE-CC-------------CBEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHcCcc-cC--ceEECCCCCHHHHHHHHHHCCCceEeEE-CCC------------CEEEEEEcHHHHHHHHH
Confidence 44567899999831 23 578999999999999998 689999996 422 23459999999999988
Q ss_pred hhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 205 NHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 205 ~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
........+...+++++ |+++++++++++++.+|+++|.+++ .+||||++|.
T Consensus 75 ~~~~~~~~~~~~~v~~~--m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~ 126 (156)
T 3ctu_A 75 EHDLSQEIMADTDIVHM--TKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGI 126 (156)
T ss_dssp HHTCCHHHHTTSBGGGG--CBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSB
T ss_pred hccccccccccCcHHHh--ccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCe
Confidence 74322233446778884 8889999999999999999999987 6999998764
No 66
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.36 E-value=8.9e-14 Score=137.04 Aligned_cols=139 Identities=9% Similarity=0.067 Sum_probs=100.0
Q ss_pred hcceeccccccCCcEEEEcCCCCHHHHHHHHH-hCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHH
Q 046022 26 REAKVRDLTAEKRRIVEVPHTASLAHTMNALV-ANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDI 104 (262)
Q Consensus 26 ~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~-~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Di 104 (262)
.+++|+|+|...++++++++++|+.|+.+.|. ++++.++||+|++ ++++|+|+..|+
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~----------------------~~lvGiVt~~DL 508 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDAN----------------------GYLLGAISRKEI 508 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTT----------------------CBBCCEESHHHH
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecC----------------------CeEEEEEEHHHH
Confidence 67899999975568889999999999999999 8999999999964 689999999999
Q ss_pred HHHHhCCC-CCCCC----------CC-C-cchHHh---------------------hhccccccccccCCCCCeeEEeCC
Q 046022 105 LAHIAGDD-QMNGS----------DD-A-PDDLDK---------------------KMSAPVSSIIGHCPEGLSLWTLSP 150 (262)
Q Consensus 105 l~~l~~~~-~l~~~----------~~-~-~~~~~~---------------------~~~~~V~~im~~~~~~~~~~~v~~ 150 (262)
++.+.... ..... +. . ...... ....+++++|+. + +.++++
T Consensus 509 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~---~--pitV~~ 583 (632)
T 3org_A 509 VDRLQHVLEDVPEPIAGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDV---S--PIVVTS 583 (632)
T ss_dssp TTTTTTC-------------------------------------------------------CCSCCC---C--CCEEET
T ss_pred HHHHHHHhhhcccccccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcC---C--CceecC
Confidence 88765421 00000 00 0 000000 001248889973 3 578999
Q ss_pred CCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHh
Q 046022 151 NTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMN 205 (262)
Q Consensus 151 ~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~ 205 (262)
++++.+|+++|. +++|++||+ +++ +.+||||++||++.+.+
T Consensus 584 ~~~l~ea~~~M~~~~i~~lpVv-e~G-------------~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 584 YSLVRQLHFLFVMLMPSMIYVT-ERG-------------KLVGIVEREDVAYGYSN 625 (632)
T ss_dssp TCBHHHHHHHHHHTCCSEEEEE-ETT-------------EEEEEEEGGGTEECCCC
T ss_pred CCcHHHHHHHHHhcCCCEEEEE-ECC-------------EEEEEEehhhHHHHHhh
Confidence 999999999998 799999997 432 34599999999876543
No 67
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.36 E-value=2.7e-12 Score=98.47 Aligned_cols=102 Identities=20% Similarity=0.274 Sum_probs=85.6
Q ss_pred ccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhccc
Q 046022 131 PVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASE 209 (262)
Q Consensus 131 ~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~ 209 (262)
+|+++|.. + +.++.+++++.+|++.|. ++.+++||+ +++ ++.+|+||..|+++++....
T Consensus 2 ~v~~im~~---~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~~------------~~~~G~vt~~dl~~~~~~~~-- 61 (122)
T 3kpb_A 2 LVKDILSK---P--PITAHSNISIMEAAKILIKHNINHLPIV-DEH------------GKLVGIITSWDIAKALAQNK-- 61 (122)
T ss_dssp BHHHHCCS---C--CCCEETTSBHHHHHHHHHHHTCSCEEEE-CTT------------SBEEEEECHHHHHHHHHTTC--
T ss_pred chHHhhCC---C--CEEeCCCCcHHHHHHHHHHcCCCeEEEE-CCC------------CCEEEEEEHHHHHHHHHhcc--
Confidence 68899973 3 578999999999999998 789999996 322 23469999999999887642
Q ss_pred chhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 210 LKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 210 l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
.++++ +|.+++.++++++++.+|+++|.+++++.+||+|++|.
T Consensus 62 ------~~v~~--~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~ 104 (122)
T 3kpb_A 62 ------KTIEE--IMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRR 104 (122)
T ss_dssp ------CBGGG--TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCB
T ss_pred ------cCHHH--HhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCC
Confidence 26777 48889999999999999999999999999999998774
No 68
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.35 E-value=2.1e-12 Score=103.82 Aligned_cols=108 Identities=15% Similarity=0.220 Sum_probs=88.5
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|.. ..+ +.++.+++++.+|+++|. ++++++||+.++.. ++.+|+||..||++++....
T Consensus 19 ~~~v~~iM~~-~~~--~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~-----------~~lvGivt~~dl~~~~~~~~ 84 (153)
T 3oco_A 19 DKVASDVMVD-RTS--MSVVDVDETIADALLLYLEEQYSRFPVTADNDK-----------DKIIGYAYNYDIVRQARIDD 84 (153)
T ss_dssp HCBHHHHSEE-GGG--CCCEETTSBHHHHHHHHHHHCCSEEEEEETTEE-----------EEEEEEEEHHHHHHHHHHHT
T ss_pred CCEeeeEecc-hhh--eEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCC-----------CcEEEEEEHHHHHhHHhcCC
Confidence 5689999973 112 578999999999999998 79999999613221 23459999999999887642
Q ss_pred ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 208 SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 208 ~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
..+++++ | ++++++.+++++.+|+++|.++++..+||||++|.
T Consensus 85 -------~~~v~~~--m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~ 127 (153)
T 3oco_A 85 -------KAKISTI--M-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGG 127 (153)
T ss_dssp -------TSBGGGT--C-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSC
T ss_pred -------CCcHHHH--h-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCC
Confidence 4577874 7 89999999999999999999999999999998874
No 69
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.35 E-value=3.6e-12 Score=101.87 Aligned_cols=114 Identities=17% Similarity=0.253 Sum_probs=91.9
Q ss_pred hHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHH
Q 046022 123 DLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLR 201 (262)
Q Consensus 123 ~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir 201 (262)
...+.+..+|+++|.. .++ +.++.+++++.+|++.|. ++++++||+ +++ ++.+|+||..||++
T Consensus 21 ~l~~~l~~~v~dim~~-~~~--~~~v~~~~~~~~a~~~m~~~~~~~~~Vv-d~~------------~~~~Givt~~dl~~ 84 (149)
T 3k2v_A 21 ALGRKLLLRVNDIMHT-GDE--IPHVGLQATLRDALLEITRKNLGMTAIC-DDD------------MNIIGIFTDGDLRR 84 (149)
T ss_dssp HHHHHTTSBGGGTSBC-GGG--SCEECTTCBHHHHHHHHHHHTSSEEEEE-CTT------------CBEEEEEEHHHHHH
T ss_pred hhchhcccCHHHHhcC-CCC--CeEECCCCcHHHHHHHHHhCCCcEEEEE-CCC------------CcEEEEecHHHHHH
Confidence 3445667799999972 112 578999999999999998 699999996 422 23469999999999
Q ss_pred HHHhhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCC
Q 046022 202 FMMNHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSS 258 (262)
Q Consensus 202 ~L~~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~ 258 (262)
++..... ....+++++ |+++++++++++++.+|+++|.+++++.+||+|++
T Consensus 85 ~~~~~~~----~~~~~v~~~--m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~ 135 (149)
T 3k2v_A 85 VFDTGVD----MRDASIADV--MTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD 135 (149)
T ss_dssp HHCSSSC----CTTCBHHHH--SEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT
T ss_pred HHhcCCC----cccCcHHHH--cCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC
Confidence 8865322 235678874 88899999999999999999999999999999865
No 70
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.33 E-value=1.4e-12 Score=103.00 Aligned_cols=108 Identities=16% Similarity=0.193 Sum_probs=86.0
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcc
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHAS 208 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~ 208 (262)
.+|+++|.. ..+ +.++.+++++.+|+++|. ++++++||+ +++. ++.+|+||..||++++....
T Consensus 3 ~~v~~iM~~-~~~--~~~v~~~~~v~~a~~~m~~~~~~~~pVv-d~~~-----------~~~vGivt~~dl~~~~~~~~- 66 (136)
T 3lfr_A 3 LQVRDIMVP-RSQ--MISIKATQTPREFLPAVIDAAHSRYPVI-GESH-----------DDVLGVLLAKDLLPLILKAD- 66 (136)
T ss_dssp CBHHHHSEE-GGG--CCCEETTCCHHHHHHHHHHHCCSEEEEE-SSST-----------TCEEEEEEGGGGGGGGGSSS-
T ss_pred CChHhcccc-HHH--EEEEcCCCCHHHHHHHHHhCCCCEEEEE-cCCC-----------CcEEEEEEHHHHHHHHHhcc-
Confidence 478999972 123 578999999999999998 799999996 4321 23459999999999875321
Q ss_pred cchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 209 ELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 209 ~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
....+++++ |++ ++++.+++++.+|+++|.++++..+||+|++|.
T Consensus 67 ----~~~~~v~~~--m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~ 111 (136)
T 3lfr_A 67 ----GDSDDVKKL--LRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGG 111 (136)
T ss_dssp ----GGGCCGGGT--CBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSC
T ss_pred ----CCCcCHHHH--cCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCC
Confidence 124567774 755 899999999999999999999999999998874
No 71
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.32 E-value=4.3e-12 Score=101.11 Aligned_cols=114 Identities=10% Similarity=0.120 Sum_probs=90.0
Q ss_pred hhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHh
Q 046022 127 KMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMN 205 (262)
Q Consensus 127 ~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~ 205 (262)
....+|+++|.. ..+ +.++.+++++.+|++.|. ++++++||+ +++ ++.+|+||..||++++..
T Consensus 12 l~~~~v~~im~~-~~~--~~~v~~~~~l~~a~~~~~~~~~~~~pVv-d~~------------~~~~Givt~~dl~~~~~~ 75 (150)
T 3lqn_A 12 FQQIFVKDLMIS-SEK--VAHVQIGNGLEHALLVLVKSGYSAIPVL-DPM------------YKLHGLISTAMILDGILG 75 (150)
T ss_dssp HHHCBHHHHSEE-GGG--SCCBCTTSBHHHHHHHHHHHTCSEEEEE-CTT------------CBEEEEEEHHHHHHHTBC
T ss_pred hhcCChhhcccC-CCc--eEEECCCCcHHHHHHHHHHcCCcEEEEE-CCC------------CCEEEEEEHHHHHHHHHh
Confidence 335689999973 123 578999999999999998 799999996 322 234699999999998864
Q ss_pred hcc-cchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 206 HAS-ELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 206 ~~~-~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
..+ ........++++ +|+++++++++++++.+|+++|.++++ +||||++|.
T Consensus 76 ~~~~~~~~~~~~~v~~--~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~ 127 (150)
T 3lqn_A 76 LERIEFERLEEMKVEQ--VMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGY 127 (150)
T ss_dssp SSSBCGGGGGGCBGGG--TCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCB
T ss_pred hcccchhHHhcCCHHH--HhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCc
Confidence 321 122345677887 488899999999999999999999997 999998774
No 72
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.32 E-value=8.7e-13 Score=126.74 Aligned_cols=174 Identities=14% Similarity=0.087 Sum_probs=29.5
Q ss_pred HHhhhcceeccc-cccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEe
Q 046022 22 QRLLREAKVRDL-TAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLT 100 (262)
Q Consensus 22 ~~~l~~~~v~dl-m~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs 100 (262)
+.++...+..++ |. ++++++++++|+.+|++.|.+++++++||+|.++ ..++++|+|+
T Consensus 90 ~~~v~~V~~~e~gM~--~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~-------------------~~g~lvGiVt 148 (503)
T 1me8_A 90 AAMVHAVKNFKAGFV--VSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGT-------------------PHGVLLGLVT 148 (503)
T ss_dssp HHHHHHHHTTTC--------------------------------------------------------------------
T ss_pred HHHHhhhhhcccCcc--cCCeEECCCCcHHHHHHHHHHcCceEEEEEECCC-------------------cCCeEEEEEE
Confidence 344555556666 85 4788999999999999999999999999998630 0158999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCccc
Q 046022 101 MLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENI 179 (262)
Q Consensus 101 ~~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~ 179 (262)
..|++.. . .....+|+++|.. .++ ++++.+++++.+|+++|. ++++++||+ |+.
T Consensus 149 ~~Dl~~~--~---------------~~~~~~V~diM~~-~~~--~~tv~~~~sl~ea~~~m~~~~i~~lpVV-De~---- 203 (503)
T 1me8_A 149 QRDYPID--L---------------TQTETKVSDMMTP-FSK--LVTAHQDTKLSEANKIIWEKKLNALPII-DDD---- 203 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhh--h---------------ccccCcHHHHhCC-CCC--CEEEcCCCcHHHHHHHHHHcCCCEEEEE-cCC----
Confidence 9998753 1 0123589999973 223 578999999999999998 799999996 422
Q ss_pred ccceecccCCeeeEecHHHHHHHHHhhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 180 SGVELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 180 ~g~~~~~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
+..+|+||.+||++.+...... ....+.+ +. -..+.. ....+.++.|.+.++..+.|-.++|
T Consensus 204 --------g~lvGiIT~~Dil~~~~~~~~~-----~d~~~~l--~v--~a~v~~-~~~~e~~~~l~e~gv~~l~Vd~~~g 265 (503)
T 1me8_A 204 --------QHLRYIVFRKDYDRSQVCHNEL-----VDSQKRY--LV--GAGINT-RDFRERVPALVEAGADVLCIDSSDG 265 (503)
T ss_dssp --------------------------CCCC-----BCTTSCB--CC--EEEECS-SSHHHHHHHHHHHTCSEEEECCSCC
T ss_pred --------CeEEEEEEecHHHHhhhcccch-----hcccccc--cc--ccccCc-hhHHHHHHHHHhhhccceEEecccC
Confidence 2335999999999987653221 0011111 11 123444 6677888899888998776644444
No 73
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.31 E-value=1.7e-12 Score=101.11 Aligned_cols=107 Identities=23% Similarity=0.320 Sum_probs=85.3
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcc
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHAS 208 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~ 208 (262)
.+|+++|.. ..+ +.++.+++++.+|++.|. ++++++||+ +++. ++.+|+||..|+++++....
T Consensus 3 ~~v~diM~~-~~~--~~~v~~~~~~~~a~~~m~~~~~~~~pVv-d~~~-----------~~~vGivt~~dl~~~~~~~~- 66 (127)
T 3nqr_A 3 QRVRDIMIP-RSQ--MITLKRNQTLDECLDVIIESAHSRFPVI-SEDK-----------DHIEGILMAKDLLPFMRSDA- 66 (127)
T ss_dssp CBHHHHSEE-GGG--CCCEETTCCHHHHHHHHHHHCCSEEEEE-SSST-----------TCEEEEEEGGGGGGGGSTTC-
T ss_pred cCHHHhccc-HHH--eEEEcCCCCHHHHHHHHHhCCCCEEEEE-cCCC-----------CcEEEEEEHHHHHHHHhccC-
Confidence 478999973 122 578999999999999998 699999996 4321 23469999999998765432
Q ss_pred cchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 209 ELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 209 ~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
...+++++ |+ +++++++++++.+|+++|.++++..+||+|++|.
T Consensus 67 -----~~~~v~~~--m~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~ 110 (127)
T 3nqr_A 67 -----EAFSMDKV--LR-TAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGG 110 (127)
T ss_dssp -----CCCCHHHH--CB-CCCEEETTCBHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred -----CCCCHHHH--cC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCC
Confidence 24567775 75 4789999999999999999999999999998874
No 74
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.31 E-value=9.3e-12 Score=100.86 Aligned_cols=109 Identities=14% Similarity=0.191 Sum_probs=86.9
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcc
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHAS 208 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~ 208 (262)
.+|+++|.. + +.++.+++++.+|+++|. ++++++||+ +++ ++.+|+||..||++++.....
T Consensus 5 ~~v~dim~~---~--~~~v~~~~tl~~a~~~m~~~~~~~~pVv-d~~------------~~lvGivt~~dl~~~~~~~~~ 66 (160)
T 2o16_A 5 IKVEDMMTR---H--PHTLLRTHTLNDAKHLMEALDIRHVPIV-DAN------------KKLLGIVSQRDLLAAQESSLQ 66 (160)
T ss_dssp CBGGGTSEE---S--CCCBCTTSBHHHHHHHHHHHTCSEEEEE-CTT------------CBEEEEEEHHHHHHHHHHHCC
T ss_pred CcHHHHhcC---C--CeEECCCCcHHHHHHHHHHcCCCEEEEE-cCC------------CcEEEEEeHHHHHHHHHHhhc
Confidence 478999973 2 577999999999999998 799999996 422 234699999999999876432
Q ss_pred cc----hhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 209 EL----KDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 209 ~l----~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
.. ......+++++ |+++++++++++++.+|+++|.+++++.+||||+ |
T Consensus 67 ~~~~~~~~~~~~~v~~i--m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g 118 (160)
T 2o16_A 67 RSAQGDSLAFETPLFEV--MHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-D 118 (160)
T ss_dssp ---------CCCBHHHH--SCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-T
T ss_pred ccccccchhcccCHHHH--hcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-C
Confidence 11 11235567774 8889999999999999999999999999999987 5
No 75
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.31 E-value=2e-11 Score=117.45 Aligned_cols=162 Identities=14% Similarity=0.164 Sum_probs=116.4
Q ss_pred eccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHHHh
Q 046022 30 VRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAHIA 109 (262)
Q Consensus 30 v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~l~ 109 (262)
..++|. ++++++++++|+.+|+++|.+++++++||++... .++++|+|+.+|+..
T Consensus 115 ~~~~m~--~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~--------------------~~~lvGiVt~rDl~~--- 169 (511)
T 3usb_A 115 SESGVI--SDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLD--------------------ERKLVGIITNRDMRF--- 169 (511)
T ss_dssp SSSCSS--SSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTT--------------------TCBEEEEEEHHHHTT---
T ss_pred cccccc--cCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCC--------------------CCEEEEEEEehHhhh---
Confidence 445553 3568999999999999999999999999998610 168999999999743
Q ss_pred CCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccC
Q 046022 110 GDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESA 188 (262)
Q Consensus 110 ~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~ 188 (262)
. . ....+|+++|.. ++ ++++.+++++.+++++|. ++++++||+ |+. +
T Consensus 170 ~-~--------------~~~~~V~~vM~~--~~--~vtv~~~~~l~eal~~m~~~~i~~lpVV-De~------------g 217 (511)
T 3usb_A 170 I-Q--------------DYSIKISDVMTK--EQ--LITAPVGTTLSEAEKILQKYKIEKLPLV-DNN------------G 217 (511)
T ss_dssp C-C--------------CSSSBHHHHCCC--CC--CCCEETTCCHHHHHHHHHHHTCSEEEEE-CTT------------S
T ss_pred h-c--------------cCCCcHHHhccc--CC--CEEECCCCCHHHHHHHHHHcCCCEEEEE-eCC------------C
Confidence 1 1 123589999973 23 578999999999999998 799999996 422 2
Q ss_pred CeeeEecHHHHHHHHHhhcccchhhhccccchhcccCcC--eEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 189 SSYQMLTQMDLLRFMMNHASELKDITSHSIRELGALNEN--VFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 189 ~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~~~~~--v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
...|+||..||++.+..... ..+ ...+- -..+.......+.++.|.+.|+..+.|-..+|
T Consensus 218 ~l~GiIT~~Dil~~~~~p~a---------~~D--~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 218 VLQGLITIKDIEKVIEFPNS---------AKD--KQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp BEEEEEEHHHHHHHHHCTTC---------CBC--TTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred CEeeeccHHHHHHhhhcccc---------hhh--hccceeeeeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 34599999999998864211 111 11111 23444455566777777788888777765554
No 76
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.31 E-value=7.4e-12 Score=119.39 Aligned_cols=120 Identities=14% Similarity=0.166 Sum_probs=99.9
Q ss_pred hcceeccccccCCcEEEEcCCCCHHHHHHHHHhC-----CCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEe
Q 046022 26 REAKVRDLTAEKRRIVEVPHTASLAHTMNALVAN-----KVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLT 100 (262)
Q Consensus 26 ~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~-----~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs 100 (262)
.+.+++++|. ++++++++++|+.+|++.|.++ ++.++||+|++ ++++|+|+
T Consensus 153 ~~~~v~~iM~--~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~----------------------~~lvGiVt 208 (473)
T 2zy9_A 153 EEDEAGGLMT--PEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK----------------------GRLKGVLS 208 (473)
T ss_dssp CTTBSTTTCB--SCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT----------------------SBEEEEEE
T ss_pred CCCCHHHhCC--CCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC----------------------CcEEEEEE
Confidence 5678999995 4799999999999999999986 68999999864 68999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCccc
Q 046022 101 MLDILAHIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENI 179 (262)
Q Consensus 101 ~~Dil~~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~ 179 (262)
..|++..- ...+++++|.. + +.++.+++++.+|++.|. ++.+++||+ |+.
T Consensus 209 ~~Dll~~~-------------------~~~~v~dim~~---~--~~~v~~~~~l~ea~~~m~~~~~~~lpVV-De~---- 259 (473)
T 2zy9_A 209 LRDLIVAD-------------------PRTRVAEIMNP---K--VVYVRTDTDQEEVARLMADYDFTVLPVV-DEE---- 259 (473)
T ss_dssp HHHHHHSC-------------------TTSBGGGTSBS---S--CCCEESSSBHHHHHHHHHHHTCSEEEEE-CTT----
T ss_pred HHHHhcCC-------------------CCCcHHHHhCC---C--CeEEeCCCcHHHHHHHHHhcCCcEEEEE-cCC----
Confidence 99987631 12479999972 3 578999999999999998 699999996 422
Q ss_pred ccceecccCCeeeEecHHHHHHHHHhh
Q 046022 180 SGVELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 180 ~g~~~~~~~~~~giITqsDIir~L~~~ 206 (262)
|+.+|+||..||++.+...
T Consensus 260 --------g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 260 --------GRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp --------SBEEEEEEHHHHHHHHHHH
T ss_pred --------CEEEEEEehHhhHHHHHHH
Confidence 2346999999999998764
No 77
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.30 E-value=3.4e-12 Score=101.18 Aligned_cols=113 Identities=20% Similarity=0.311 Sum_probs=85.2
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc-
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA- 207 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~- 207 (262)
.+|+++|.. ..+ +.++.+++++.+|+++|. ++++++||+ +++ ++.+|+||..||++++....
T Consensus 5 ~~v~~im~~-~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~~------------~~~~G~vt~~dl~~~~~~~~~ 68 (152)
T 4gqw_A 5 YTVGEFMTK-KED--LHVVKPTTTVDEALELLVENRITGFPVI-DED------------WKLVGLVSDYDLLALDSGDST 68 (152)
T ss_dssp SBGGGTSEE-STT--CCCBCTTSBHHHHHHHHHHTTCSEEEEE-CTT------------CBEEEEEEHHHHTTCC----C
T ss_pred EEhhhccCC-CCC--CeEECCCCcHHHHHHHHHHcCCceEEEE-eCC------------CeEEEEEEHHHHHHhhcccCc
Confidence 478999973 123 578999999999999998 789999996 432 23459999999987644221
Q ss_pred --------ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 208 --------SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 208 --------~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
..+......+++++ |.++++++.+++++.+|+++|.+++++.+||||++|.
T Consensus 69 ~~~~~~~~~~~~~~~~~~v~~~--m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~ 127 (152)
T 4gqw_A 69 WKTFNAVQKLLSKTNGKLVGDL--MTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGK 127 (152)
T ss_dssp CHHHHHHHTC-----CCBHHHH--SEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSB
T ss_pred ccchHHHHHHHHHhccccHHHh--cCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCc
Confidence 11122234567774 8888999999999999999999999999999998774
No 78
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.29 E-value=1.3e-11 Score=96.24 Aligned_cols=105 Identities=17% Similarity=0.301 Sum_probs=87.1
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcc
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHAS 208 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~ 208 (262)
.+|+++|.. . +.++.+++++.+|++.|. ++.+++||.. ++ + .+|+||..|+++++.....
T Consensus 4 ~~v~~im~~---~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~--~-----------~~Givt~~dl~~~~~~~~~ 64 (133)
T 2ef7_A 4 EIVKEYMKT---Q--VISVTKDAKLNDIAKVMTEKNIGSVIVVD-GN--K-----------PVGIITERDIVKAIGKGKS 64 (133)
T ss_dssp CBGGGTSBC---S--CCEEETTCBHHHHHHHHHHHTCSEEEEEE-TT--E-----------EEEEEEHHHHHHHHHTTCC
T ss_pred ccHHHhccC---C--CEEECCCCcHHHHHHHHHhcCCCEEEEEE-CC--E-----------EEEEEcHHHHHHHHhcCCC
Confidence 478999973 2 578999999999999998 6999999963 21 2 3599999999998876422
Q ss_pred cchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 209 ELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 209 ~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
...++++ +|++++.++++++++.+|++.|.+++++.+||+|++|.
T Consensus 65 -----~~~~v~~--~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~ 109 (133)
T 2ef7_A 65 -----LETKAEE--FMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGN 109 (133)
T ss_dssp -----TTCBGGG--TSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSC
T ss_pred -----cccCHHH--HcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCe
Confidence 2456777 48889999999999999999999999999999998774
No 79
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.29 E-value=2.9e-12 Score=103.55 Aligned_cols=107 Identities=18% Similarity=0.213 Sum_probs=86.7
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|.. ..+ +.++.+++++.+|+++|. ++++++||+ +++. ++.+|+||..|+++++...
T Consensus 37 ~~~v~diM~~-~~~--~~~v~~~~~i~~a~~~m~~~~~~~~pVv-d~~~-----------~~lvGivt~~dl~~~~~~~- 100 (156)
T 3oi8_A 37 DLEVRDAMIT-RSR--MNVLKENDSIERITAYVIDTAHSRFPVI-GEDK-----------DEVLGILHAKDLLKYMFNP- 100 (156)
T ss_dssp TCBGGGTCEE-GGG--CCCEETTCCHHHHHHHHHHHCCSEEEEE-SSST-----------TCEEEEEEGGGGGGGSSCG-
T ss_pred CCCHhheeee-HHH--eEEECCCCCHHHHHHHHHHCCCCEEEEE-cCCC-----------CcEEEEEEHHHHHHHHHcC-
Confidence 5689999973 112 578999999999999998 799999996 4321 2346999999999876442
Q ss_pred ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 208 SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 208 ~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
...+++++ |+ +++++++++++.+|+++|.++++..+||||++|.
T Consensus 101 ------~~~~v~~i--m~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~ 144 (156)
T 3oi8_A 101 ------EQFHLKSI--LR-PAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGG 144 (156)
T ss_dssp ------GGCCHHHH--CB-CCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSS
T ss_pred ------CcccHHHH--cC-CCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCC
Confidence 34577774 75 4899999999999999999999999999998875
No 80
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.29 E-value=7.5e-12 Score=101.19 Aligned_cols=106 Identities=20% Similarity=0.289 Sum_probs=87.1
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|.. .+++.+++++.+|++.|. ++++++||+ +++ ++.+|+||..||++++....
T Consensus 16 ~~~v~~im~~------~~~v~~~~~~~~a~~~m~~~~~~~~~Vv-d~~------------~~~~Givt~~dl~~~~~~~~ 76 (159)
T 3fv6_A 16 KLQVKDFQSI------PVVIHENVSVYDAICTMFLEDVGTLFVV-DRD------------AVLVGVLSRKDLLRASIGQQ 76 (159)
T ss_dssp TCBGGGSCBC------CCEEETTSBHHHHHHHHHHHTCSEEEEE-CTT------------SCEEEEEEHHHHHHHHTSCS
T ss_pred hCCHHHHcCC------CEEECCCCcHHHHHHHHHHCCCCEEEEE-cCC------------CcEEEEEeHHHHHHHhhccC
Confidence 4589999972 248999999999999998 799999996 422 23469999999999875432
Q ss_pred ccchhhhccccchhcccCc--CeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 208 SELKDITSHSIRELGALNE--NVFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 208 ~~l~~l~~~ti~eL~~~~~--~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
.....++++ +|++ +++++++++++.+|+++|.+++++.+||||++|
T Consensus 77 ----~~~~~~v~~--~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g 124 (159)
T 3fv6_A 77 ----ELTSVPVHI--IMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTD 124 (159)
T ss_dssp ----CTTTCBGGG--TSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECS
T ss_pred ----cccCcCHHH--HHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCC
Confidence 123467887 4887 899999999999999999999999999999876
No 81
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.29 E-value=1.2e-11 Score=100.58 Aligned_cols=111 Identities=18% Similarity=0.302 Sum_probs=90.1
Q ss_pred hccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhh
Q 046022 128 MSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 128 ~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~ 206 (262)
...+|+++|....++ +.++.+++++.+|+++|. ++++++||+ +++ ++.+|+||..||++++...
T Consensus 22 ~~~~v~dim~~~~~~--~~~v~~~~~l~~a~~~~~~~~~~~~~Vv-d~~------------~~~~Givt~~dl~~~~~~~ 86 (165)
T 3fhm_A 22 MATFVKDLLDRKGRD--VVTVGPDVSIGEAAGTLHAHKIGAVVVT-DAD------------GVVLGIFTERDLVKAVAGQ 86 (165)
T ss_dssp SSCBHHHHHHHHCSC--CCEECTTSBHHHHHHHHHHHTCSEEEEE-CTT------------SCEEEEEEHHHHHHHHHHH
T ss_pred hhcCHHHHhccCCCC--CeEECCCCCHHHHHHHHHHcCCCEEEEE-cCC------------CeEEEEEEHHHHHHHHHhc
Confidence 356899999731023 578999999999999998 799999996 422 2446999999999998875
Q ss_pred cccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 207 ASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 207 ~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
.. .....++++ +|.++++++++++++.+|+++|.+++++.+||||+ |
T Consensus 87 ~~---~~~~~~v~~--~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g 133 (165)
T 3fhm_A 87 GA---ASLQQSVSV--AMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-G 133 (165)
T ss_dssp GG---GGGTSBGGG--TSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-T
T ss_pred CC---ccccCCHHH--HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-C
Confidence 31 123567887 48889999999999999999999999999999998 6
No 82
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.28 E-value=2.2e-11 Score=100.82 Aligned_cols=110 Identities=15% Similarity=0.273 Sum_probs=89.1
Q ss_pred hccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhh
Q 046022 128 MSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 128 ~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~ 206 (262)
+..+|+++|.. . +.++.+++++.+|+++|. ++++++||+ +++ ++.+|+||..||++++...
T Consensus 7 ~~~~v~~im~~---~--~~~v~~~~~l~ea~~~~~~~~~~~~pVv-d~~------------g~~vGivt~~dl~~~~~~~ 68 (184)
T 1pvm_A 7 MFMRVEKIMNS---N--FKTVNWNTTVFDAVKIMNENHLYGLVVK-DDN------------GNDVGLLSERSIIKRFIPR 68 (184)
T ss_dssp CCCBGGGTSBT---T--CCEEETTCBHHHHHHHHHHHTCCEEEEE-CTT------------SCEEEEEEHHHHHHHTGGG
T ss_pred cccCHHHhcCC---C--CeEECCCCcHHHHHHHHHHcCCCEEEEE-cCC------------CcEEEEEeHHHHHHHHhhc
Confidence 44689999972 3 678999999999999998 799999996 322 2346999999999987643
Q ss_pred cccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 207 ASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 207 ~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
... ....++++ +|.++++++.+++++.+|+++|.+++++.+||||++|.
T Consensus 69 ~~~---~~~~~v~~--im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~ 117 (184)
T 1pvm_A 69 NKK---PDEVPIRL--VMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGR 117 (184)
T ss_dssp CCC---GGGSBGGG--TSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCC
T ss_pred ccC---cccCCHHH--HhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCe
Confidence 111 12456777 48889999999999999999999999999999998764
No 83
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.28 E-value=3.9e-12 Score=99.34 Aligned_cols=105 Identities=19% Similarity=0.245 Sum_probs=83.6
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcc
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHAS 208 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~ 208 (262)
.+|+++|.. ..+ +.++.+++++.+|+++|. ++++++||+ +++. ++.+|+||..|+++++..
T Consensus 5 ~~v~diM~~-~~~--~~~v~~~~~~~~a~~~m~~~~~~~~pVv-d~~~-----------~~~~Givt~~dl~~~~~~--- 66 (129)
T 3jtf_A 5 RTVADIMVP-RSR--MDLLDISQPLPQLLATIIETAHSRFPVY-EDDR-----------DNIIGILLAKDLLRYMLE--- 66 (129)
T ss_dssp CBHHHHCEE-GGG--CCCEETTSCHHHHHHHHHHSCCSEEEEE-SSST-----------TCEEEEEEGGGGGGGGTC---
T ss_pred CCHHHhCcc-HHH--eEEECCCCCHHHHHHHHHHcCCCEEEEE-cCCC-----------CcEEEEEEHHHHHhHhcc---
Confidence 479999973 123 578999999999999998 789999996 4321 234699999999987642
Q ss_pred cchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 209 ELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 209 ~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
...+++++ |. +++++.+++++.+|+++|.++++..+||+|++|.
T Consensus 67 -----~~~~v~~~--m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~ 110 (129)
T 3jtf_A 67 -----PALDIRSL--VR-PAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGG 110 (129)
T ss_dssp -----TTSCGGGG--CB-CCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CC
T ss_pred -----CCcCHHHH--hC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCC
Confidence 13567774 64 5889999999999999999999999999998774
No 84
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.27 E-value=7.6e-12 Score=100.56 Aligned_cols=109 Identities=20% Similarity=0.359 Sum_probs=87.7
Q ss_pred ccccccccccCC---CCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHH
Q 046022 129 SAPVSSIIGHCP---EGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMM 204 (262)
Q Consensus 129 ~~~V~~im~~~~---~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~ 204 (262)
..+|+++|...+ ++ +.++.+++++.+|+++|. ++++++||. ++ ++.+|+||..||++++.
T Consensus 6 ~~~v~dim~~~~~~~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~V~-~~-------------~~~~Givt~~dl~~~~~ 69 (157)
T 4fry_A 6 STTVAQILKAKPDSGRT--IYTVTKNDFVYDAIKLMAEKGIGALLVV-DG-------------DDIAGIVTERDYARKVV 69 (157)
T ss_dssp -CBHHHHHHHSTTTTCC--CCEEETTSBHHHHHHHHHHHTCSEEEEE-SS-------------SSEEEEEEHHHHHHHSG
T ss_pred HHHHHHHHhcccccCCC--CeEECCCCcHHHHHHHHHHcCCCEEEEe-eC-------------CEEEEEEEHHHHHHHHH
Confidence 357999997432 33 688999999999999998 689999993 42 23459999999999886
Q ss_pred hhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 205 NHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 205 ~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
..... ....+++++ |+++++++++++++.+|+++|.+++++.+||+| +|
T Consensus 70 ~~~~~---~~~~~v~~~--m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g 118 (157)
T 4fry_A 70 LQERS---SKATRVEEI--MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GG 118 (157)
T ss_dssp GGTCC---SSSCBHHHH--SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TT
T ss_pred hccCC---ccccCHHHH--cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CC
Confidence 64321 235678874 888999999999999999999999999999999 45
No 85
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.26 E-value=1.8e-11 Score=94.15 Aligned_cols=103 Identities=12% Similarity=0.208 Sum_probs=85.1
Q ss_pred ccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhccc
Q 046022 131 PVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASE 209 (262)
Q Consensus 131 ~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~ 209 (262)
+|+++|.. + +.++.+++++.+|++.|. ++.+++||+. + + +.+|+||..|+++++.....
T Consensus 2 ~v~~~m~~---~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~--~-----------~~~G~it~~dl~~~~~~~~~- 61 (125)
T 1pbj_A 2 RVEDVMVT---D--VDTIDITASLEDVLRNYVENAKGSSVVVK-E--G-----------VRVGIVTTWDVLEAIAEGDD- 61 (125)
T ss_dssp CHHHHCBC---S--CCEEETTCBHHHHHHHHHHHCCCEEEEEE-T--T-----------EEEEEEEHHHHHHHHHHTCC-
T ss_pred CHHHhcCC---C--ceEECCCCcHHHHHHHHHHcCCCEEEEEe-C--C-----------eeEEEEeHHHHHHHHhcCCc-
Confidence 57888872 3 578999999999999998 6999999963 2 1 23599999999998876432
Q ss_pred chhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 210 LKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 210 l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
....+++++ |++++.++++++++.+|+++|.+++++.+||+|+ |
T Consensus 62 ---~~~~~v~~~--m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~ 105 (125)
T 1pbj_A 62 ---LAEVKVWEV--MERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-D 105 (125)
T ss_dssp ---TTTSBHHHH--CBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-T
T ss_pred ---ccccCHHHH--cCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-C
Confidence 124577774 8889999999999999999999999999999998 5
No 86
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.25 E-value=4.1e-12 Score=98.88 Aligned_cols=106 Identities=20% Similarity=0.181 Sum_probs=86.3
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|.. + +.++.+++++.+|++.|. ++.+++||+.+ +++ +|+||..||++++.+..
T Consensus 4 s~~v~~~m~~---~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~~-----------~Givt~~dl~~~~~~~~ 64 (128)
T 3gby_A 4 SVTFSYLAET---D--YPVFTLGGSTADAARRLAASGCACAPVLDG---ERY-----------LGMVHLSRLLEGRKGWP 64 (128)
T ss_dssp TCBGGGGCBC---C--SCCEETTSBHHHHHHHHHHHTCSEEEEEET---TEE-----------EEEEEHHHHHTTCSSSC
T ss_pred ceEHHHhhcC---C--cceECCCCCHHHHHHHHHHCCCcEEEEEEC---CEE-----------EEEEEHHHHHHHHhhCC
Confidence 3579999973 3 577999999999999998 68999999633 233 59999999998765432
Q ss_pred ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 208 SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 208 ~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
. ...++++ +|++++.++++++++.+|+++|.++++..+||||++|.
T Consensus 65 ~-----~~~~v~~--~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~ 110 (128)
T 3gby_A 65 T-----VKEKLGE--ELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGR 110 (128)
T ss_dssp C-----TTCBCCG--GGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCB
T ss_pred c-----ccCcHHH--HccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCC
Confidence 1 1245776 48889999999999999999999999999999998774
No 87
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.25 E-value=2.1e-11 Score=100.79 Aligned_cols=106 Identities=9% Similarity=0.055 Sum_probs=85.4
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|.. ..+ ++++.+++++.+|+++|. ++++++||+ ++.. ++.+|+||..||++++....
T Consensus 35 ~~~v~diM~~-~~~--v~~v~~~~tv~ea~~~m~~~~~~~~pVv-d~~~-----------~~lvGivt~~Dl~~~~~~~~ 99 (173)
T 3ocm_A 35 ERSIRSIMTP-RTD--VSWVNIDDDAATIRQQLTAAPHSFFPVC-RGSL-----------DEVVGIGRAKDLVADLITEG 99 (173)
T ss_dssp TSCSTTTSEE-GGG--CCCEETTSCHHHHHHHHHHSSCSEEEEE-SSST-----------TSEEEEEEHHHHHHHHHHHS
T ss_pred CCCHHHhCCc-HHH--eEEEeCCCCHHHHHHHHHhCCCCEEEEE-eCCC-----------CCEEEEEEHHHHHHHHhcCC
Confidence 4589999972 123 678999999999999998 799999996 3321 23469999999999886541
Q ss_pred ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 208 SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 208 ~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
..+++ +.++++++++++++.+|+++|.++++..+||||++|.
T Consensus 100 -------~~~v~----~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~ 141 (173)
T 3ocm_A 100 -------RVRRN----RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGA 141 (173)
T ss_dssp -------SCCGG----GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCC
T ss_pred -------cchhH----hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCC
Confidence 23444 4478899999999999999999999999999998874
No 88
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.25 E-value=2.5e-11 Score=97.80 Aligned_cols=109 Identities=19% Similarity=0.289 Sum_probs=86.2
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCe-eEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhh-
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHR-ALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNH- 206 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~r-v~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~- 206 (262)
.+|+++|.. . +.++.+++++.+|+++|. +++++ +||+.+ + ++ +|+||..||++++...
T Consensus 16 ~~v~~im~~---~--~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~-~--~~-----------vGivt~~dl~~~~~~~~ 76 (157)
T 1o50_A 16 KDVCKLISL---K--PTVVEEDTPIEEIVDRILEDPVTRTVYVARD-N--KL-----------VGMIPVMHLLKVSGFHF 76 (157)
T ss_dssp HHHTTSSCC---C--CEEECTTCBHHHHHHHHHHSTTCCEEEEEET-T--EE-----------EEEEEHHHHHHHHHHHH
T ss_pred ccHhhcccC---C--CceECCCCCHHHHHHHHHhCCCCccEEEEEC-C--EE-----------EEEEEHHHHHHHHhhhH
Confidence 478999972 3 688999999999999998 78999 999633 2 33 5999999999987532
Q ss_pred ---c---cc----chhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 207 ---A---SE----LKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 207 ---~---~~----l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
. .. .......+++++ |++ ++++++++++.+|+++|.+++++.+||||++|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~v~~i--m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~ 137 (157)
T 1o50_A 77 FGFIPKEELIRSSMKRLIAKNASEI--MLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGE 137 (157)
T ss_dssp HCCCC-------CCCCCSSCBHHHH--CBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSC
T ss_pred HhhhccHHHHHHHHHHHcCCcHHHH--cCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCE
Confidence 0 00 112234567774 888 999999999999999999999999999997764
No 89
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.24 E-value=1.8e-11 Score=98.46 Aligned_cols=112 Identities=11% Similarity=0.202 Sum_probs=82.9
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|.. + +.++.+++++.+|+++|. ++++++||+.+++. ++.+|+||..||++++....
T Consensus 12 ~~~v~dim~~---~--~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~-----------~~~~Givt~~dl~~~~~~~~ 75 (164)
T 2pfi_A 12 HVRVEHFMNH---S--ITTLAKDTPLEEVVKVVTSTDVTEYPLVESTES-----------QILVGIVQRAQLVQALQAEP 75 (164)
T ss_dssp SCBHHHHCBC---C--CCCEETTCBHHHHHHHHHTCCCSEEEEESCTTT-----------CBEEEEEEHHHHHHHHHC--
T ss_pred CCCHHHHcCC---C--CeEECCCCcHHHHHHHHHhCCCCceeEEecCCC-----------CEEEEEEEHHHHHHHHHhhc
Confidence 3579999973 3 577999999999999998 68999999632111 23469999999999886542
Q ss_pred ccchhhhccccchhcccCcC------eEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 208 SELKDITSHSIRELGALNEN------VFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 208 ~~l~~l~~~ti~eL~~~~~~------v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
....+....++.++ |.++ ++++.+++++.+|+++|.+++++.+||+| +|
T Consensus 76 ~~~~~~~~~~v~~~--m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g 130 (164)
T 2pfi_A 76 PSRAPGHQQCLQDI--LARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RG 130 (164)
T ss_dssp -----CCCCBHHHH--HHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TT
T ss_pred cccCCcccchhhhh--hcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CC
Confidence 21111123445553 5444 79999999999999999999999999999 55
No 90
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.23 E-value=3e-11 Score=96.79 Aligned_cols=112 Identities=12% Similarity=0.206 Sum_probs=87.4
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|.. .+. +.++.+++++.+|++.|. ++++++||+ +++ ++.+|+||..||++++....
T Consensus 10 ~~~v~~im~~-~~~--~~~v~~~~~~~~a~~~m~~~~~~~~pVv-d~~------------~~~~Givt~~dl~~~~~~~~ 73 (157)
T 2emq_A 10 QMTVKPFLIP-ADK--VAHVQPGNYLDHALLVLTKTGYSAIPVL-DTS------------YKLHGLISMTMMMDAILGLE 73 (157)
T ss_dssp CCBSTTTCEE-GGG--SCCBCTTSBHHHHHHHHHHSSSSEEEEE-CTT------------CCEEEEEEHHHHHHHSBCSS
T ss_pred hCcHHhhccC-Ccc--ceEECCCCcHHHHHHHHHHCCceEEEEE-cCC------------CCEEEEeeHHHHHHHHhccc
Confidence 5689999972 112 578999999999999998 789999996 322 23469999999999875421
Q ss_pred c-cchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 208 S-ELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 208 ~-~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
. ........++++ +|+++++++++++++.+|+++|.++++ +||||++|.
T Consensus 74 ~~~~~~~~~~~v~~--~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~ 123 (157)
T 2emq_A 74 RIEFERLETMKVEE--VMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGY 123 (157)
T ss_dssp SBCGGGGGTCBGGG--TCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSS
T ss_pred ccchHHhcCCcHHH--HhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCe
Confidence 1 012234567777 488899999999999999999999988 999998764
No 91
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.22 E-value=2.9e-11 Score=94.63 Aligned_cols=107 Identities=17% Similarity=0.324 Sum_probs=86.0
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHH-HHHHHhh
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDL-LRFMMNH 206 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDI-ir~L~~~ 206 (262)
..+|+++|.. . +.++.+++++.+|+++|. ++.+++||+ +++ ++.+|+||..|+ ++++...
T Consensus 7 ~~~v~~im~~---~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~~------------~~~~Givt~~dl~~~~~~~~ 68 (138)
T 2p9m_A 7 NIKVKDVMTK---N--VITAKRHEGVVEAFEKMLKYKISSLPVI-DDE------------NKVIGIVTTTDIGYNLIRDK 68 (138)
T ss_dssp TCBGGGTSBC---S--CCCEETTSBHHHHHHHHHHHTCCEEEEE-CTT------------CBEEEEEEHHHHHHHHTTTC
T ss_pred cCCHHHhhcC---C--ceEECCCCcHHHHHHHHHHCCCcEEEEE-CCC------------CeEEEEEEHHHHHHHHHhhc
Confidence 3579999972 2 577999999999999998 789999996 322 234699999999 8877542
Q ss_pred cccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCC-----CcEEEEEcCCCC
Q 046022 207 ASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAAL-----LHAVPIVKSSGA 260 (262)
Q Consensus 207 ~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~-----isav~VVd~~g~ 260 (262)
. ....+++++ |++++.++++++++.+|+++|.+++ ++.+||+|++|.
T Consensus 69 ~-----~~~~~v~~~--m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~ 120 (138)
T 2p9m_A 69 Y-----TLETTIGDV--MTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNK 120 (138)
T ss_dssp C-----CSSCBHHHH--SCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSB
T ss_pred c-----cCCcCHHHH--hCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCe
Confidence 1 124567774 8889999999999999999999999 999999997763
No 92
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.22 E-value=8.7e-12 Score=101.88 Aligned_cols=113 Identities=19% Similarity=0.307 Sum_probs=85.3
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc-
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA- 207 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~- 207 (262)
.+|+++|.. ..+ +.++.+++++.+|+++|. ++++++||+ +++ ++.+|+||..||++++....
T Consensus 4 ~~v~dim~~-~~~--~~~v~~~~~l~~a~~~m~~~~~~~~pVv-d~~------------~~~~Givt~~dl~~~~~~~~~ 67 (180)
T 3sl7_A 4 YTVGDFMTP-RQN--LHVVKPSTSVDDALELLVEKKVTGLPVI-DDN------------WTLVGVVSDYDLLALDSISGR 67 (180)
T ss_dssp CBHHHHSEE-GGG--CCCBCTTSBHHHHHHHHHHHTCSEEEEE-CTT------------CBEEEEEEHHHHTCC------
T ss_pred eeHHHhcCC-CCC--ceeeCCCCcHHHHHHHHHHcCCCeEEEE-CCC------------CeEEEEEEHHHHHhhhhhccc
Confidence 368899973 112 578999999999999998 689999996 422 23469999999986432110
Q ss_pred ----------------------ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 208 ----------------------SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 208 ----------------------~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
..+......+++++ |+++++++++++++.+|+++|.+++++.+||||++|.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~ 140 (180)
T 3sl7_A 68 SQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDL--MTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGK 140 (180)
T ss_dssp -------------CCCSHHHHHHHHHTTTTCBHHHH--SEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCB
T ss_pred cCCcccccccccchhhhhHHHHHHHhccccccHHHH--hCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCe
Confidence 00012235567774 8888999999999999999999999999999998774
No 93
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.22 E-value=1.7e-10 Score=110.16 Aligned_cols=118 Identities=14% Similarity=0.205 Sum_probs=96.6
Q ss_pred eeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEec--CCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHH
Q 046022 29 KVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAA--PPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILA 106 (262)
Q Consensus 29 ~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd--~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~ 106 (262)
+++|+|. ++++++++++|+.+|++.|.++++.++||++ .+ ++++|+|+..|++.
T Consensus 91 ~~~~im~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~----------------------~~lvGivt~~Dl~~ 146 (491)
T 1zfj_A 91 RSENGVI--IDPFFLTPEHKVSEAEELMQRYRISGVPIVETLAN----------------------RKLVGIITNRDMRF 146 (491)
T ss_dssp HHTTTTS--SSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTT----------------------CBEEEEEEHHHHHH
T ss_pred hHHhcCc--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCC----------------------CEEEEEEEHHHHhh
Confidence 4689995 4778999999999999999999999999998 43 68999999999875
Q ss_pred HHhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceec
Q 046022 107 HIAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELV 185 (262)
Q Consensus 107 ~l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~ 185 (262)
. .+ ...+++++|.. ++ +.++.+++++.+++++|. ++++++||+ +..
T Consensus 147 ~--~~----------------~~~~v~~im~~--~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVV-d~~---------- 193 (491)
T 1zfj_A 147 I--SD----------------YNAPISEHMTS--EH--LVTAAVGTDLETAERILHEHRIEKLPLV-DNS---------- 193 (491)
T ss_dssp C--SC----------------SSSBTTTSCCC--SC--CCCEETTCCHHHHHHHHHHTTCSEEEEE-CTT----------
T ss_pred h--cc----------------CCCcHHHHcCC--CC--CEEECCCCCHHHHHHHHHHcCCCEEEEE-cCC----------
Confidence 3 11 13479999972 12 578999999999999998 799999996 422
Q ss_pred ccCCeeeEecHHHHHHHHHh
Q 046022 186 ESASSYQMLTQMDLLRFMMN 205 (262)
Q Consensus 186 ~~~~~~giITqsDIir~L~~ 205 (262)
++.+|+||++||++.+..
T Consensus 194 --g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 194 --GRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp --SBEEEEEEHHHHHHHHHC
T ss_pred --CcEEEEEEHHHHHHHHhc
Confidence 234599999999999874
No 94
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.21 E-value=6.8e-11 Score=92.63 Aligned_cols=107 Identities=13% Similarity=0.266 Sum_probs=85.1
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhc
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHA 207 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~ 207 (262)
..+|+++|.. + +.++.+++++.+|++.|. ++++++||+ +++ ++.+|+||..|+++.+....
T Consensus 6 ~~~v~~im~~---~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~~------------~~~~Givt~~dl~~~~~~~~ 67 (138)
T 2yzi_A 6 KAPIKVYMTK---K--LLGVKPSTSVQEASRLMMEFDVGSLVVI-NDD------------GNVVGFFTKSDIIRRVIVPG 67 (138)
T ss_dssp TSBGGGTCBC---C--CCEECTTSBHHHHHHHHHHHTCSEEEEE-CTT------------SCEEEEEEHHHHHHHTTTTC
T ss_pred hhhHHHHhcC---C--CeEECCCCcHHHHHHHHHHcCCCEEEEE-cCC------------CcEEEEEeHHHHHHHHHhcC
Confidence 3579999972 3 578999999999999998 689999996 322 23469999999985433321
Q ss_pred ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 208 SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 208 ~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
. ....++++ +|++++.++++++++.+|+++|.+++++.+ |||++|.
T Consensus 68 ~----~~~~~v~~--~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~ 113 (138)
T 2yzi_A 68 L----PYDIPVER--IMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGK 113 (138)
T ss_dssp C----CTTSBGGG--TCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTE
T ss_pred C----cccCCHHH--HhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCC
Confidence 1 23457777 488899999999999999999999999999 9997763
No 95
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.21 E-value=4.5e-11 Score=93.95 Aligned_cols=111 Identities=17% Similarity=0.280 Sum_probs=84.4
Q ss_pred hhcccccc---ccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHH
Q 046022 127 KMSAPVSS---IIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRF 202 (262)
Q Consensus 127 ~~~~~V~~---im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~ 202 (262)
.+..++++ +|. .+ +.++.+++++.+|++.|. ++.+++||+ +++ ++.+|+||..|++++
T Consensus 5 ~~~~~v~~~~~~~~---~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~~------------~~~~Givt~~dl~~~ 66 (144)
T 2nyc_A 5 FLKIPIGDLNIITQ---DN--MKSCQMTTPVIDVIQMLTQGRVSSVPII-DEN------------GYLINVYEAYDVLGL 66 (144)
T ss_dssp GGGSBGGGSSCCBC---SS--CCCBCTTSBHHHHHHHHHHHTCSEEEEE-CTT------------CBEEEEEEHHHHHHH
T ss_pred hhhcchhhcCCCCC---CC--ceEECCCCcHHHHHHHHHHcCcceeeEE-cCC------------CcEEEEEcHHHHHHH
Confidence 45668888 664 13 578999999999999998 699999996 322 234599999999998
Q ss_pred HHhhcccchhhhccccchhcccCc------CeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 203 MMNHASELKDITSHSIRELGALNE------NVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 203 L~~~~~~l~~l~~~ti~eL~~~~~------~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
+.... ......+++++ |.+ ++.++++++++.+|+++|.+++++.+||+|++|.
T Consensus 67 ~~~~~---~~~~~~~v~~~--m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~ 125 (144)
T 2nyc_A 67 IKGGI---YNDLSLSVGEA--LMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGR 125 (144)
T ss_dssp HHTC-------CCSBHHHH--HHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSB
T ss_pred hcccc---cccCCccHHHH--HhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCC
Confidence 86532 11124566763 554 6899999999999999999999999999998764
No 96
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.21 E-value=3.2e-11 Score=94.35 Aligned_cols=108 Identities=15% Similarity=0.264 Sum_probs=85.0
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcc
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHAS 208 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~ 208 (262)
.+|+++|.....+ +.++.+++++.+|++.|. ++.+++||+ ++ ++.+|+||..||++++..+..
T Consensus 6 ~~v~~im~~~~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~-------------~~~~Givt~~dl~~~~~~~~~ 69 (135)
T 2rc3_A 6 KTVKHLLQEKGHT--VVAIGPDDSVFNAMQKMAADNIGALLVM-KD-------------EKLVGILTERDFSRKSYLLDK 69 (135)
T ss_dssp CBHHHHHHHHCCC--CCEECTTSBHHHHHHHHHHHTCSEEEEE-ET-------------TEEEEEEEHHHHHHHGGGSSS
T ss_pred eeHHHHHhcCCCC--cEEECCCCcHHHHHHHHHhcCCCEEEEE-EC-------------CEEEEEEehHHHHHHHHHcCC
Confidence 3688999611013 578999999999999998 699999996 32 123599999999976544311
Q ss_pred cchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 209 ELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 209 ~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
.....++++ +|++++.++++++++.+|+++|.+++++.+||+| +|
T Consensus 70 ---~~~~~~v~~--~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g 114 (135)
T 2rc3_A 70 ---PVKDTQVKE--IMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DG 114 (135)
T ss_dssp ---CGGGSBGGG--TSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TT
T ss_pred ---CcccCCHHH--hccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CC
Confidence 123567887 4888999999999999999999999999999999 55
No 97
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.19 E-value=2.1e-11 Score=95.04 Aligned_cols=104 Identities=12% Similarity=0.232 Sum_probs=84.0
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHH-HHHhhc
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLR-FMMNHA 207 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir-~L~~~~ 207 (262)
.+|+++|.. + +.++.+++++.+|+++|. ++.+++||+ +++ ++.+|+||..|+++ ++....
T Consensus 8 ~~v~~im~~---~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vv-d~~------------~~~~Givt~~dl~~~~~~~~~ 69 (133)
T 1y5h_A 8 TTARDIMNA---G--VTCVGEHETLTAAAQYMREHDIGALPIC-GDD------------DRLHGMLTDRDIVIKGLAAGL 69 (133)
T ss_dssp CCHHHHSEE---T--CCCEETTSBHHHHHHHHHHHTCSEEEEE-CGG------------GBEEEEEEHHHHHHTTGGGTC
T ss_pred cCHHHHhcC---C--ceEeCCCCCHHHHHHHHHHhCCCeEEEE-CCC------------CeEEEEEeHHHHHHHHHhcCC
Confidence 478999973 2 577999999999999998 689999996 322 23469999999994 554322
Q ss_pred ccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcC
Q 046022 208 SELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKS 257 (262)
Q Consensus 208 ~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~ 257 (262)
. ....+++++ |++++.++++++++.+|+++|.+++++.+||+|+
T Consensus 70 ~----~~~~~v~~~--m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 113 (133)
T 1y5h_A 70 D----PNTATAGEL--ARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE 113 (133)
T ss_dssp C----TTTSBHHHH--HTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET
T ss_pred C----ccccCHHHH--hcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC
Confidence 1 124577774 8889999999999999999999999999999997
No 98
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.18 E-value=1.3e-10 Score=82.50 Aligned_cols=65 Identities=18% Similarity=0.273 Sum_probs=54.4
Q ss_pred cEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHHHhCCCCCCCCC
Q 046022 39 RIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAHIAGDDQMNGSD 118 (262)
Q Consensus 39 ~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~l~~~~~l~~~~ 118 (262)
+++++++++|+.+|+++|.+++++++||++. ++++||||.+||++.+.....
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~-----------------------~~lvGIvT~~Di~~~~~~~~~----- 52 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-----------------------DEILGVVTERDILDKVVAKGK----- 52 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-----------------------TEEEEEEEHHHHHHHTTTTTC-----
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEEC-----------------------CEEEEEEEHHHHHHHHHhcCC-----
Confidence 3689999999999999999999999999984 589999999999988765211
Q ss_pred CCcchHHhhhcccccccccc
Q 046022 119 DAPDDLDKKMSAPVSSIIGH 138 (262)
Q Consensus 119 ~~~~~~~~~~~~~V~~im~~ 138 (262)
.....+|+++|+.
T Consensus 53 -------~~~~~~V~~iMt~ 65 (70)
T 3ghd_A 53 -------NPKEVKVEEIMTK 65 (70)
T ss_dssp -------CGGGCBGGGTCEE
T ss_pred -------CcccCCHHHhcCC
Confidence 1235689999984
No 99
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.17 E-value=8.5e-11 Score=96.48 Aligned_cols=116 Identities=14% Similarity=0.140 Sum_probs=86.8
Q ss_pred ccccccccccCCCCCeeEEe--CCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHh
Q 046022 129 SAPVSSIIGHCPEGLSLWTL--SPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMN 205 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v--~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~ 205 (262)
..+|+++|....+.+ +.++ .+++++.+|+++|. ++++++||+.+++. ++.+|+||..|+++++..
T Consensus 10 ~~~v~dim~~~~~~~-~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~-----------~~lvGiit~~dl~~~~~~ 77 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDP-LLTVLTQDSMTVEDVETIISETTYSGFPVVVSRES-----------QRLVGFVLRRDLIISIEN 77 (185)
T ss_dssp CCBHHHHSBSCTTSC-CCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTT-----------CBEEEEEEHHHHHHHHHH
T ss_pred cCcHHHHhcccccCc-eEEEecCCCccHHHHHHHHHhcCCCceeEEEECCC-----------CeEEEEEEHHHHHHHHHh
Confidence 458999997321111 3567 99999999999998 78999999621221 234699999999999876
Q ss_pred hcccc--------------------hhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 206 HASEL--------------------KDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 206 ~~~~l--------------------~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
..... ......++++ +|+++++++.+++++.+|+++|.+++++.+||+| +|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g 148 (185)
T 2j9l_A 78 ARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRN--ILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NG 148 (185)
T ss_dssp HHTSCSCCCTTCEEECSSSCCCCCTTCCCCEECGG--GEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TT
T ss_pred hcccCCCccccceeecccCCcccccccccCccHHH--hhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CC
Confidence 41100 0123456666 4888999999999999999999999999999998 54
No 100
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.16 E-value=4.9e-11 Score=96.10 Aligned_cols=113 Identities=8% Similarity=0.140 Sum_probs=87.8
Q ss_pred hccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhh
Q 046022 128 MSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 128 ~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~ 206 (262)
...+|+++|.. .++ +.++.+++++.+|+++|. ++++++||+ +++ ++.+|+||..||++++...
T Consensus 12 ~~~~v~~im~~-~~~--~~~v~~~~~l~~a~~~m~~~~~~~~pVv-d~~------------~~lvGivt~~dl~~~~~~~ 75 (159)
T 1yav_A 12 LEATVGQFMIE-ADK--VAHVQVGNNLEHALLVLTKTGYTAIPVL-DPS------------YRLHGLIGTNMIMNSIFGL 75 (159)
T ss_dssp TTCBHHHHSEE-GGG--SCCEETTCBHHHHHHHHHHHCCSEEEEE-CTT------------CBEEEEEEHHHHHHHHBCS
T ss_pred hHhhHHHHhCC-ccc--eEEECCCCcHHHHHHHHHhCCCcEEEEE-CCC------------CCEEEEeEHHHHHHHhhhh
Confidence 35689999972 112 578999999999999998 799999996 422 2346999999999988653
Q ss_pred cc-cchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 207 AS-ELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 207 ~~-~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
.. ........+++++ |+++++++.+++++.+|+++|.++++ +||||++|.
T Consensus 76 ~~~~~~~~~~~~v~~~--m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~ 126 (159)
T 1yav_A 76 ERIEFEKLDQITVEEV--MLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQV 126 (159)
T ss_dssp SSBCGGGTTTSBHHHH--SBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCB
T ss_pred cccchhhhccCCHHHh--cCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCe
Confidence 21 1122345678874 88899999999999999999999987 999998763
No 101
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.13 E-value=3.3e-11 Score=115.62 Aligned_cols=118 Identities=16% Similarity=0.189 Sum_probs=82.6
Q ss_pred ceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHH
Q 046022 28 AKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAH 107 (262)
Q Consensus 28 ~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~ 107 (262)
.++.++|. ++++++++++|+.+|++.|.+++++++||++.+ ++++|+|+.+|+..
T Consensus 89 k~~~~~m~--~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~----------------------~~lvGiVt~rDL~~- 143 (496)
T 4fxs_A 89 KIFEAGVV--THPVTVRPEQTIADVMELTHYHGFAGFPVVTEN----------------------NELVGIITGRDVRF- 143 (496)
T ss_dssp HHCCC--C--BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSS----------------------SBEEEEEEHHHHTT-
T ss_pred cccccccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEccC----------------------CEEEEEEEHHHHhh-
Confidence 34678886 467899999999999999999999999999864 68999999999751
Q ss_pred HhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecc
Q 046022 108 IAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVE 186 (262)
Q Consensus 108 l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~ 186 (262)
.. ....+|+++|.. .++ ++++.+++++.+++++|. ++++++||+ |+.
T Consensus 144 -~~----------------~~~~~v~diM~p-~~~--~vtv~~~~~l~ea~~~m~~~~i~~lpVV-De~----------- 191 (496)
T 4fxs_A 144 -VT----------------DLTKSVAAVMTP-KER--LATVKEGATGAEVQEKMHKARVEKILVV-NDE----------- 191 (496)
T ss_dssp -CC----------------CTTSBGGGTSEE-GGG--CCEEECC----CGGGTCC---CCCEEEE-CTT-----------
T ss_pred -cc----------------cCCCcHHHHhcC-CCC--CEEECCCCCHHHHHHHHHHcCCCEEEEE-cCC-----------
Confidence 11 123579999971 112 578999999999999998 799999996 432
Q ss_pred cCCeeeEecHHHHHHHH
Q 046022 187 SASSYQMLTQMDLLRFM 203 (262)
Q Consensus 187 ~~~~~giITqsDIir~L 203 (262)
+...|+||..||++..
T Consensus 192 -G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 192 -FQLKGMITAKDFHKAE 207 (496)
T ss_dssp -SBCCEEECCC-----C
T ss_pred -CCEEEeehHhHHHHhh
Confidence 2335999999999865
No 102
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.13 E-value=2.2e-11 Score=116.43 Aligned_cols=120 Identities=15% Similarity=0.250 Sum_probs=7.2
Q ss_pred eeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHHH
Q 046022 29 KVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAHI 108 (262)
Q Consensus 29 ~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~l 108 (262)
++.|+|. ++++++++++|+.+|++.|.++++.++||+|.+ ++++|+||..|+...
T Consensus 96 ~~~~iM~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~----------------------~~lvGivt~~Dl~~~- 150 (494)
T 1vrd_A 96 KTENGII--YDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEE----------------------GRLVGLLTNRDVRFE- 150 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCc--cCCeEECCCCCHHHHHHHHHHcCceEEEEEcCC----------------------CEEEEEEEHHHHHhh-
Confidence 4788995 478899999999999999999999999999864 589999999998752
Q ss_pred hCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceeccc
Q 046022 109 AGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVES 187 (262)
Q Consensus 109 ~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~ 187 (262)
. ....+|+++|.. .++ +.++.+++++.+++++|. ++++++||+ +++
T Consensus 151 -~----------------~~~~~v~~im~~-~~~--~~~v~~~~~l~ea~~~m~~~~~~~lpVV-d~~------------ 197 (494)
T 1vrd_A 151 -K----------------NLSKKIKDLMTP-REK--LIVAPPDISLEKAKEILHQHRIEKLPLV-SKD------------ 197 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -c----------------CCCCcHHHHhCC-CCC--CeEECCCCCHHHHHHHHHHcCCcEEEEE-cCC------------
Confidence 1 023479999972 113 688999999999999998 699999996 322
Q ss_pred CCeeeEecHHHHHHHHHhh
Q 046022 188 ASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 188 ~~~~giITqsDIir~L~~~ 206 (262)
++.+|+||+.||++.+...
T Consensus 198 g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 198 NKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp -----------CHHHHTCT
T ss_pred CeEEEEEEHHHHHhhhccc
Confidence 2345999999999987543
No 103
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.11 E-value=2.4e-10 Score=91.39 Aligned_cols=106 Identities=12% Similarity=0.221 Sum_probs=82.9
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcc
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHAS 208 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~ 208 (262)
.+|+++ . + +.++.+++++.+|++.|. ++++.+||+ +++ ++.+|+||..||++++.....
T Consensus 23 ~~v~~~-~----~--~~~v~~~~~~~~a~~~m~~~~~~~~pVv-d~~------------~~~vGivt~~dl~~~~~~~~~ 82 (152)
T 2uv4_A 23 LQIGTY-A----N--IAMVRTTTPVYVALGIFVQHRVSALPVV-DEK------------GRVVDIYSKFDVINLAAEKTY 82 (152)
T ss_dssp HTCSBC-S----S--CCCEETTCBHHHHHHHHHHHCCSEEEEE-CTT------------SBEEEEEEHHHHHHHHHCSSC
T ss_pred ccCCcc-C----C--ceEeCCCCcHHHHHHHHHHcCCceEeEE-CCC------------CcEEEEEeHHHHHHHhcchhh
Confidence 356666 2 2 577999999999999998 699999996 422 234699999999998865321
Q ss_pred cchhhhccccchhcccC------cCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 209 ELKDITSHSIRELGALN------ENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 209 ~l~~l~~~ti~eL~~~~------~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
.....+++++ |. ++++++.+++++.+|+++|.+++++.+||||++|.
T Consensus 83 ---~~~~~~v~~~--m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~ 135 (152)
T 2uv4_A 83 ---NNLDVSVTKA--LQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDV 135 (152)
T ss_dssp ---CCTTSBGGGG--GGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSB
T ss_pred ---hhhcchHHHH--HhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCe
Confidence 1123456663 64 78999999999999999999999999999998764
No 104
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.09 E-value=5e-11 Score=114.15 Aligned_cols=118 Identities=17% Similarity=0.181 Sum_probs=3.5
Q ss_pred ceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHH
Q 046022 28 AKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAH 107 (262)
Q Consensus 28 ~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~ 107 (262)
.+++++|. .+++++++++|+.+|+++|.+++++.+||+| + ++++|+|+..|+...
T Consensus 88 k~~~~~m~--~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~----------------------g~lvGIVt~rDl~~~ 142 (490)
T 4avf_A 88 KKHETAIV--RDPVTVTPSTKIIELLQMAREYGFSGFPVVE-Q----------------------GELVGIVTGRDLRVK 142 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCcc--cCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-C----------------------CEEEEEEEhHHhhhc
Confidence 35788986 4678999999999999999999999999998 4 589999999997421
Q ss_pred HhCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecc
Q 046022 108 IAGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVE 186 (262)
Q Consensus 108 l~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~ 186 (262)
. ....+|+++|+. .++ ++++.+++++.+|+++|. ++++++||+ |+.
T Consensus 143 -~-----------------~~~~~V~~vMtp-~~~--~vtv~~~~~l~ea~~~m~~~~i~~lpVV-De~----------- 189 (490)
T 4avf_A 143 -P-----------------NAGDTVAAIMTP-KDK--LVTAREGTPLEEMKAKLYENRIEKMLVV-DEN----------- 189 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -c-----------------ccCCcHHHHhcc-CCC--CEEECCCCcHHHHHHHHHHcCCCEEEEE-cCC-----------
Confidence 1 123589999971 113 688999999999999998 799999996 422
Q ss_pred cCCeeeEecHHHHHHHHH
Q 046022 187 SASSYQMLTQMDLLRFMM 204 (262)
Q Consensus 187 ~~~~~giITqsDIir~L~ 204 (262)
++..|+||..||++...
T Consensus 190 -g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 190 -FYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ------------------
T ss_pred -CcEEEEEehHHhhhhcc
Confidence 23459999999999764
No 105
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.06 E-value=4.9e-10 Score=95.16 Aligned_cols=102 Identities=15% Similarity=0.299 Sum_probs=84.3
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHhc----CCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHH
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFSK----GIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMM 204 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~~----g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~ 204 (262)
..+++++|+. + +.++.+++++.+|++.|.+ +++.+||+ ++. ++.+|+||..|+++.
T Consensus 53 ~~~v~~iM~~---~--~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vv-d~~------------~~lvGivt~~dll~~-- 112 (205)
T 3kxr_A 53 ENEIGRYTDH---Q--MLVLSDKATVAQAQRFFRRIELDCNDNLFIV-DEA------------DKYLGTVRRYDIFKH-- 112 (205)
T ss_dssp TTCGGGGCBC---C--CCEEETTCBHHHHHHHHHHCCCTTCCEEEEE-CTT------------CBEEEEEEHHHHTTS--
T ss_pred cchHHhhccC---c--eEEECCCCcHHHHHHHHHhhCccCeeEEEEE-cCC------------CeEEEEEEHHHHHhC--
Confidence 4579999972 3 6889999999999999984 78889985 422 234599999998752
Q ss_pred hhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 205 NHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 205 ~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
....++++ +|++++++|++++++.+|+++|.++++.++||||++|.
T Consensus 113 --------~~~~~v~~--im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~ 158 (205)
T 3kxr_A 113 --------EPHEPLIS--LLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGE 158 (205)
T ss_dssp --------CTTSBGGG--GCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSB
T ss_pred --------CCcchHHH--HhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCe
Confidence 12457887 49899999999999999999999999999999998874
No 106
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.02 E-value=3.5e-10 Score=96.29 Aligned_cols=101 Identities=13% Similarity=0.203 Sum_probs=83.1
Q ss_pred cccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcc
Q 046022 130 APVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHAS 208 (262)
Q Consensus 130 ~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~ 208 (262)
..+.++|.. + +.++.+++++.+|+++|. ++++++||+ +++ ++++|+||..|+.+++.
T Consensus 13 ~~~~~~~~~---~--~~~v~~~~tv~ea~~~m~~~~~~~~pVv-d~~------------~~l~Givt~~dl~~~~~---- 70 (213)
T 1vr9_A 13 MKVKKWVTQ---D--FPMVEESATVRECLHRMRQYQTNECIVK-DRE------------GHFRGVVNKEDLLDLDL---- 70 (213)
T ss_dssp CBGGGGCBS---C--SCEEETTCBHHHHHHHHHHTTSSEEEEE-CTT------------SBEEEEEEGGGGTTSCT----
T ss_pred cCHHHhhcC---C--CeEECCCCcHHHHHHHHHHCCCCEEEEE-cCC------------CEEEEEEEHHHHHhhcC----
Confidence 357788862 3 578999999999999998 789999996 322 23459999999987542
Q ss_pred cchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 209 ELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 209 ~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
..+++++ |+++++++.+++++.+|+++|.+++++.+||+|++|.
T Consensus 71 ------~~~v~~i--m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~ 114 (213)
T 1vr9_A 71 ------DSSVFNK--VSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMR 114 (213)
T ss_dssp ------TSBSGGG--CBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCB
T ss_pred ------CCcHHHH--ccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCE
Confidence 3567874 8889999999999999999999999999999998763
No 107
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.02 E-value=6.4e-10 Score=97.67 Aligned_cols=62 Identities=6% Similarity=0.096 Sum_probs=49.7
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhh
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~ 206 (262)
..+|+++|+. + ++++.+++++.+|+++|. ++++++||+.+++. +.++|+||++||++++...
T Consensus 12 ~~~v~diMt~---~--vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~-----------~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 12 NIQVGDIMVR---D--VTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDT-----------NTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp SCBTTSSSBS---S--CCCEETTCBHHHHHHHHHHCCCSEEEEESCTTT-----------CBEEEEEEHHHHHHHHHHH
T ss_pred CCChHHhcCC---C--CeEECCCCCHHHHHHHHHhcCCCEEEEEecCCC-----------CeEEEEEEHHHHHHHHHHh
Confidence 4579999983 3 688999999999999998 79999999743221 2346999999999987654
No 108
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.95 E-value=1.2e-09 Score=97.38 Aligned_cols=102 Identities=19% Similarity=0.244 Sum_probs=84.7
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-c-----CCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHH
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-K-----GIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRF 202 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~-----g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~ 202 (262)
..+|+++|.. + ++++.+++++.+|++.|. + +++++||+ +++ ++.+|+||..|++++
T Consensus 136 ~~~v~~iM~~---~--~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVv-d~~------------~~lvGivt~~dll~~ 197 (286)
T 2oux_A 136 DETAGAIMTT---E--FVSIVANQTVRSAMYVLKNQADMAETIYYVYVV-DQE------------NHLVGVISLRDLIVN 197 (286)
T ss_dssp TTBHHHHCBS---C--CCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEE-CTT------------CBEEEEEEHHHHTTS
T ss_pred hHHHHHhCCC---C--ceEECCCCcHHHHHHHHHHcccCccceeEEEEE-cCC------------CeEEEEEEHHHHHcC
Confidence 5688999972 3 688999999999999997 4 78889996 422 234599999999874
Q ss_pred HHhhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 203 MMNHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 203 L~~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
....+++++ |++++++|++++++.+|+++|.++++.++||||++|.
T Consensus 198 ----------~~~~~v~~i--m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~ 243 (286)
T 2oux_A 198 ----------DDDTLIADI--LNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDH 243 (286)
T ss_dssp ----------CTTSBHHHH--SBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCB
T ss_pred ----------CCCCcHHHH--cCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCe
Confidence 124577874 8889999999999999999999999999999998774
No 109
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.91 E-value=4.2e-09 Score=93.08 Aligned_cols=102 Identities=14% Similarity=0.199 Sum_probs=84.4
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-c-----CCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHH
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-K-----GIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRF 202 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~-----g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~ 202 (262)
..+++++|+. + ++++.+++++.+|++.|. . ++.++||+ ++. ++.+|+||..|+++.
T Consensus 134 ~~~v~~iM~~---~--~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vv-d~~------------~~lvGivt~~dll~~ 195 (278)
T 2yvy_A 134 EDEAGGLMTP---E--YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV-DEK------------GRLKGVLSLRDLIVA 195 (278)
T ss_dssp TTBGGGTCBS---C--CCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEE-CTT------------CBEEEEEEHHHHHHS
T ss_pred cchHHhhcCC---C--ceEECCCCcHHHHHHHHHHccCCccceeEEEEE-CCC------------CCEEEEEEHHHHhcC
Confidence 5679999972 3 688999999999999998 3 68899996 422 234599999999863
Q ss_pred HHhhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 203 MMNHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 203 L~~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
....++++ +|++++++|++++++.+|+++|.++++..+||||++|.
T Consensus 196 ----------~~~~~v~~--im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~ 241 (278)
T 2yvy_A 196 ----------DPRTRVAE--IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGR 241 (278)
T ss_dssp ----------CTTCBSTT--TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSB
T ss_pred ----------CCCCcHHH--HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCe
Confidence 12457777 48889999999999999999999999999999998774
No 110
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.90 E-value=3.8e-11 Score=115.51 Aligned_cols=123 Identities=11% Similarity=0.137 Sum_probs=62.1
Q ss_pred eeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHHH
Q 046022 29 KVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAHI 108 (262)
Q Consensus 29 ~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~l 108 (262)
++.++|.. +++++++++|+.+|+++|.++++.++||+|.+. ..++++|+||..|+....
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~-------------------~~~~lvGiVt~~Dl~~~~ 167 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGT-------------------MGSKLVGIVTSRDIDFLA 167 (514)
T ss_dssp TCCTTSCS--SCCCCCC-----------------CEESCC---------------------------CCEECTTTTC---
T ss_pred hhhhcccc--CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCC-------------------cCCEEEEEEEHHHHHhhh
Confidence 57899963 567999999999999999999999999998620 015899999999975421
Q ss_pred hCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceeccc
Q 046022 109 AGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVES 187 (262)
Q Consensus 109 ~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~ 187 (262)
. .....+++++|.. .++ +.++.++++|.+++++|. .+++++||+ +++
T Consensus 168 ~----------------~~~~~~v~~vm~~-~~~--~~tv~~~~~l~ea~~~m~~~~~~~lpVV-d~~------------ 215 (514)
T 1jcn_A 168 E----------------KDHTTLLSEVMTP-RIE--LVVAPAGVTLKEANEILQRSKKGKLPIV-NDC------------ 215 (514)
T ss_dssp -----------------------------C-CBC--CCCEETTCCSTTTTTHHHHHTCSCCCEE-SSS------------
T ss_pred h----------------ccCCCCHHHHhCC-CCC--CeEECCCCCHHHHHHHHHHcCCCcccEE-CCC------------
Confidence 0 0123579999972 113 578999999999999998 799999996 422
Q ss_pred CCeeeEecHHHHHHHHH
Q 046022 188 ASSYQMLTQMDLLRFMM 204 (262)
Q Consensus 188 ~~~~giITqsDIir~L~ 204 (262)
++.+|+||++||++.+.
T Consensus 216 g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 216 DELVAIIARTDLKKNRD 232 (514)
T ss_dssp SCCC----CCCCSSCCC
T ss_pred CeEEEEEEHHHHHHHhh
Confidence 23359999999988654
No 111
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.89 E-value=2.3e-09 Score=103.24 Aligned_cols=105 Identities=13% Similarity=0.134 Sum_probs=85.1
Q ss_pred ccccccccccCCCCCeeEEeCCC-CCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhh
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPN-TSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~-~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~ 206 (262)
..+|+++|.. + ++++.++ +++.+|+++|. ++++++||+.+++ ++++||||..||++++...
T Consensus 383 ~~~V~diM~~---~--~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~------------g~lvGiVt~~Dll~~l~~~ 445 (527)
T 3pc3_A 383 SLAIAELELP---A--PPVILKSDATVGEAIALMKKHRVDQLPVVDQDD------------GSVLGVVGQETLITQIVSM 445 (527)
T ss_dssp TSBGGGGCCC---C--CSCCEETTCBHHHHHHHHHHHTCSEEEEECTTT------------CCEEEEEEHHHHHHHHHHH
T ss_pred CCcHHHhCcC---C--CeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCC------------CEEEEEEEHHHHHHHHHhc
Confidence 4689999972 3 5789999 99999999998 7999999963122 2345999999999998764
Q ss_pred cccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCC
Q 046022 207 ASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSS 258 (262)
Q Consensus 207 ~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~ 258 (262)
.. ....++++ +|++++++|++++++.+|+++|.++++ +||||++
T Consensus 446 ~~----~~~~~V~~--im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~ 489 (527)
T 3pc3_A 446 NR----QQSDPAIK--ALNKRVIRLNESEILGKLARVLEVDPS--VLILGKN 489 (527)
T ss_dssp CC----CTTSBGGG--GEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEEC
T ss_pred cC----cCCCcHHH--HhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCC
Confidence 22 12457887 499999999999999999999988876 6999984
No 112
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.86 E-value=2.5e-10 Score=109.18 Aligned_cols=109 Identities=15% Similarity=0.215 Sum_probs=0.0
Q ss_pred cEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHHHhCCCCCCCCC
Q 046022 39 RIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAHIAGDDQMNGSD 118 (262)
Q Consensus 39 ~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~l~~~~~l~~~~ 118 (262)
+.+++.|+.||.+|+++|.+++++++||++... ..++++||||.+|+ ++ ++
T Consensus 147 dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~-------------------~~~kLvGIvT~RD~-rf--~d------- 197 (556)
T 4af0_A 147 DPLCLGPDATVGDVLEIKAKFGFCGVPITETGE-------------------PDSKLLGIVTGRDV-QF--QD------- 197 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEcCCCCCHHHHHHHHHHhCCCccccccccC-------------------cCCEEEEEEecccc-cc--cc-------
Confidence 457999999999999999999999999998631 12689999999994 33 11
Q ss_pred CCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHH
Q 046022 119 DAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQM 197 (262)
Q Consensus 119 ~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqs 197 (262)
..++|+++|+. + ++++.++.++.+|.++|. +++.++||+ |++. ++ .|+||..
T Consensus 198 ---------~~~~V~evMT~---~--lvt~~~~~~leeA~~iL~~~kieklpVV-d~~g-~L-----------vGlIT~k 250 (556)
T 4af0_A 198 ---------AETPIKSVMTT---E--VVTGSSPITLEKANSLLRETKKGKLPIV-DSNG-HL-----------VSLVARS 250 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------cceEhhhhccc---c--eEEecCCCCHHHHHHHHHHccccceeEE-ccCC-cE-----------EEEEEec
Confidence 13589999982 3 789999999999999998 689999996 4321 34 4999999
Q ss_pred HHHHHH
Q 046022 198 DLLRFM 203 (262)
Q Consensus 198 DIir~L 203 (262)
|+++.-
T Consensus 251 Di~k~~ 256 (556)
T 4af0_A 251 DLLKNQ 256 (556)
T ss_dssp ------
T ss_pred hhhhhh
Confidence 998754
No 113
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.85 E-value=3.1e-09 Score=104.64 Aligned_cols=112 Identities=10% Similarity=0.095 Sum_probs=82.1
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHh--cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhh
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS--KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNH 206 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~--~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~ 206 (262)
+.+|+++|.. .++ +.++++++++.++.+.|. ++.+++||+ |++ +++ +|+||++|+++.+..+
T Consensus 452 ~~~V~diM~p-~~~--v~~v~~~~t~~e~~~~~~~~~~~~~~PVv-d~~-~~l-----------vGiVt~~DL~~~l~~~ 515 (632)
T 3org_A 452 EMTAREIMHP-IEG--EPHLFPDSEPQHIKGILEKFPNRLVFPVI-DAN-GYL-----------LGAISRKEIVDRLQHV 515 (632)
T ss_dssp TSBHHHHCBC-TTT--SCCBCSSSCHHHHHHHHHHSTTCCEECBB-CTT-CBB-----------CCEESHHHHTTTTTTC
T ss_pred cCcHHHHhhc-CCC--ceEecCCCcHHHHHHHHHhcCCcceEEEE-ecC-CeE-----------EEEEEHHHHHHHHHHH
Confidence 4579999972 123 578999999999999998 478899996 432 233 4999999999876543
Q ss_pred ccc----------------------chhhhc---------------------cccchhcccCcCeEEEeCCCcHHHHHHH
Q 046022 207 ASE----------------------LKDITS---------------------HSIRELGALNENVFAITESTKVIDAIKC 243 (262)
Q Consensus 207 ~~~----------------------l~~l~~---------------------~ti~eL~~~~~~v~tv~~~~~~~~A~~l 243 (262)
... +..+.. .++++ +|++++++|++++++.+|+++
T Consensus 516 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~--iMt~~pitV~~~~~l~ea~~~ 593 (632)
T 3org_A 516 LEDVPEPIAGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVV--PCDVSPIVVTSYSLVRQLHFL 593 (632)
T ss_dssp -------------------------------------------------------CC--SCCCCCCEEETTCBHHHHHHH
T ss_pred hhhcccccccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccch--hhcCCCceecCCCcHHHHHHH
Confidence 110 000000 02444 599999999999999999999
Q ss_pred HHhCCCcEEEEEcCCC
Q 046022 244 MRAALLHAVPIVKSSG 259 (262)
Q Consensus 244 M~~~~isav~VVd~~g 259 (262)
|.+++++.+||| ++|
T Consensus 594 M~~~~i~~lpVv-e~G 608 (632)
T 3org_A 594 FVMLMPSMIYVT-ERG 608 (632)
T ss_dssp HHHTCCSEEEEE-ETT
T ss_pred HHhcCCCEEEEE-ECC
Confidence 999999999999 555
No 114
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.82 E-value=1.7e-09 Score=103.28 Aligned_cols=154 Identities=16% Similarity=0.251 Sum_probs=20.1
Q ss_pred eeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHHH
Q 046022 29 KVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAHI 108 (262)
Q Consensus 29 ~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~l 108 (262)
...++|. .+++++++++|+.+|++.|.++++..+||++. ++++|+|+..|++.
T Consensus 94 ~~~~~m~--~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-----------------------~~lvGivt~~Dl~~-- 146 (486)
T 2cu0_A 94 RAERLIV--EDVITIAPDETVDFALFLMEKHGIDGLPVVED-----------------------EKVVGIITKKDIAA-- 146 (486)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred chhhccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-----------------------CEEEEEEEHHHhcc--
Confidence 3577885 57889999999999999999999999999985 37999999999874
Q ss_pred hCCCCCCCCCCCcchHHhhhccccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceeccc
Q 046022 109 AGDDQMNGSDDAPDDLDKKMSAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVES 187 (262)
Q Consensus 109 ~~~~~l~~~~~~~~~~~~~~~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~ 187 (262)
. . ..++.++|.. + +.++.+++++.+++++|. ++++++||+ ++.
T Consensus 147 -~-~----------------~~~v~~im~~---~--~~~v~~~~~l~eal~~m~~~~~~~lpVV-de~------------ 190 (486)
T 2cu0_A 147 -R-E----------------GKLVKELMTK---E--VITVPESIEVEEALKIMIENRIDRLPVV-DER------------ 190 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -C-C----------------CCCHHHHccC---C--CeEECCcCcHHHHHHHHHHcCCCEEEEE-ecC------------
Confidence 1 1 2378999972 2 578999999999999998 689999996 322
Q ss_pred CCeeeEecHHHHHHHHHhhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcC
Q 046022 188 ASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKS 257 (262)
Q Consensus 188 ~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~ 257 (262)
+..+|+||.+||++.+... .. ....-.. ++-. -.+.. .. .+.+..|.+.++..+ |++.
T Consensus 191 g~lvGiiT~~Dil~~~~~~-~~----~~~~~g~--~~v~--~~~~~-~~-~~~a~~l~~~gvd~l-vvdt 248 (486)
T 2cu0_A 191 GKLVGLITMSDLVARKKYK-NA----VRDENGE--LLVA--AAVSP-FD-IKRAIELDKAGVDVI-VVDT 248 (486)
T ss_dssp ----------------CCT-TC----CBCTTSC--BCCE--EEECT-TC-HHHHHHHHHTTCSEE-EEEC
T ss_pred CeEEEEEEHHHHHHhhhcc-cc----ccccCCc--eeec--ceech-hh-HHHHHHHHHhcCCce-EEEe
Confidence 2345999999999975321 00 0000011 1111 12223 33 677888999999886 5553
No 115
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.76 E-value=4.7e-08 Score=67.68 Aligned_cols=65 Identities=18% Similarity=0.273 Sum_probs=53.8
Q ss_pred cEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEeHHHHHHHHhCCCCCCCCC
Q 046022 39 RIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLTMLDILAHIAGDDQMNGSD 118 (262)
Q Consensus 39 ~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs~~Dil~~l~~~~~l~~~~ 118 (262)
+++++++++|+.+|++.|.++++.++||++. ++++|+|+..|+++++.....
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-----------------------~~l~Givt~~dl~~~~~~~~~----- 52 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-----------------------DEILGVVTERDILDKVVAKGK----- 52 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-----------------------TEEEEEEEHHHHHHHTTTTTC-----
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-----------------------CEEEEEEEHHHHHHHHHHcCC-----
Confidence 3678999999999999999999999999985 489999999999998865211
Q ss_pred CCcchHHhhhcccccccccc
Q 046022 119 DAPDDLDKKMSAPVSSIIGH 138 (262)
Q Consensus 119 ~~~~~~~~~~~~~V~~im~~ 138 (262)
.....+|+++|..
T Consensus 53 -------~~~~~~v~~im~~ 65 (70)
T 3fio_A 53 -------NPKEVKVEEIMTK 65 (70)
T ss_dssp -------CGGGCBGGGTCEE
T ss_pred -------CcccCCHHHhcCC
Confidence 1224689999973
No 116
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.75 E-value=2.3e-08 Score=95.22 Aligned_cols=102 Identities=14% Similarity=0.209 Sum_probs=84.6
Q ss_pred ccccccccccCCCCCeeEEeCCCCCHHHHHHHHhc------CCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHH
Q 046022 129 SAPVSSIIGHCPEGLSLWTLSPNTSILDCMEVFSK------GIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRF 202 (262)
Q Consensus 129 ~~~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~~------g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~ 202 (262)
..+++++|+. + +.++.+++++.+|++.|.+ ++.++||+ +++ ++.+|+||..|+++.
T Consensus 154 ~~~v~~iM~~---~--~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVv-d~~------------~~lvGiVt~~Dll~~ 215 (473)
T 2zy9_A 154 EDEAGGLMTP---E--YVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV-DEK------------GRLKGVLSLRDLIVA 215 (473)
T ss_dssp TTBSTTTCBS---C--EEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEE-CTT------------SBEEEEEEHHHHHHS
T ss_pred CCCHHHhCCC---C--ceEeCCCCcHHHHHHHHHhccCCcCceeEEEEE-CCC------------CcEEEEEEHHHHhcC
Confidence 5678999972 3 7899999999999999983 47899996 432 234599999999862
Q ss_pred HHhhcccchhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 203 MMNHASELKDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 203 L~~~~~~l~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
-.+.++++ +|+++++++++++++.+|+++|.++++.++||||++|.
T Consensus 216 ----------~~~~~v~d--im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~ 261 (473)
T 2zy9_A 216 ----------DPRTRVAE--IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGR 261 (473)
T ss_dssp ----------CTTSBGGG--TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSB
T ss_pred ----------CCCCcHHH--HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCE
Confidence 13567887 49889999999999999999999999999999998874
No 117
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.65 E-value=2.7e-08 Score=70.36 Aligned_cols=68 Identities=15% Similarity=0.225 Sum_probs=51.9
Q ss_pred eEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcccchhhhccccchhcc
Q 046022 145 LWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGA 223 (262)
Q Consensus 145 ~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~ 223 (262)
++++.|++++.+|+++|. ++++++||..+ ++++||||.+||++.+..+.. ...+.++++ +
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~--------------~~lvGIvT~~Di~~~~~~~~~---~~~~~~V~~--i 62 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG--------------DEILGVVTERDILDKVVAKGK---NPKEVKVEE--I 62 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET--------------TEEEEEEEHHHHHHHTTTTTC---CGGGCBGGG--T
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC--------------CEEEEEEEHHHHHHHHHhcCC---CcccCCHHH--h
Confidence 578999999999999998 79999999632 134599999999987654321 123457887 5
Q ss_pred cCcCeEEE
Q 046022 224 LNENVFAI 231 (262)
Q Consensus 224 ~~~~v~tv 231 (262)
|+++++||
T Consensus 63 Mt~~~iTV 70 (70)
T 3ghd_A 63 MTKNPVKI 70 (70)
T ss_dssp CEECTTCC
T ss_pred cCCCCeEC
Confidence 99888764
No 118
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.55 E-value=9.4e-08 Score=91.90 Aligned_cols=94 Identities=16% Similarity=0.228 Sum_probs=77.0
Q ss_pred eEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcccchhhhccccchhcc
Q 046022 145 LWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGA 223 (262)
Q Consensus 145 ~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~ 223 (262)
++++.+++++.+++++|. .++.++||+.++.. ++++||||..|+.+ . .-.+.+++++
T Consensus 123 ~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~-----------~~lvGiVt~rDl~~---~------~~~~~~V~~v-- 180 (511)
T 3usb_A 123 PFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDE-----------RKLVGIITNRDMRF---I------QDYSIKISDV-- 180 (511)
T ss_dssp CCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTT-----------CBEEEEEEHHHHTT---C------CCSSSBHHHH--
T ss_pred CEEECCCCCHHHHHHHHHHcCCcEEEEEecCCC-----------CEEEEEEEehHhhh---h------ccCCCcHHHh--
Confidence 468999999999999998 69999999643111 23459999999954 1 1125678885
Q ss_pred cCc-CeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 224 LNE-NVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 224 ~~~-~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
|++ +++++++++++.+|+++|.++++..+||||++|.
T Consensus 181 M~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~ 218 (511)
T 3usb_A 181 MTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGV 218 (511)
T ss_dssp CCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSB
T ss_pred cccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCC
Confidence 887 8999999999999999999999999999998874
No 119
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.53 E-value=2.1e-07 Score=88.68 Aligned_cols=101 Identities=14% Similarity=0.179 Sum_probs=81.3
Q ss_pred cccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcccc
Q 046022 132 VSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASEL 210 (262)
Q Consensus 132 V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~l 210 (262)
+.++|.. + ++++.+++++.+++++|. +++.++||+.+++. ++++|+||..|+++.. +
T Consensus 92 ~~~im~~---~--~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~-----------~~lvGivt~~Dl~~~~----~-- 149 (491)
T 1zfj_A 92 SENGVII---D--PFFLTPEHKVSEAEELMQRYRISGVPIVETLAN-----------RKLVGIITNRDMRFIS----D-- 149 (491)
T ss_dssp HTTTTSS---S--CCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTT-----------CBEEEEEEHHHHHHCS----C--
T ss_pred HHhcCcC---C--CeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCC-----------CEEEEEEEHHHHhhhc----c--
Confidence 5678872 3 577999999999999998 78999999641011 2345999999998631 1
Q ss_pred hhhhccccchhcccCc-CeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCC
Q 046022 211 KDITSHSIRELGALNE-NVFAITESTKVIDAIKCMRAALLHAVPIVKSSG 259 (262)
Q Consensus 211 ~~l~~~ti~eL~~~~~-~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g 259 (262)
.+.++++ +|++ +++++++++++.+|+++|.++++..+||||++|
T Consensus 150 ---~~~~v~~--im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g 194 (491)
T 1zfj_A 150 ---YNAPISE--HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSG 194 (491)
T ss_dssp ---SSSBTTT--SCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTS
T ss_pred ---CCCcHHH--HcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCC
Confidence 2457777 4887 899999999999999999999999999999876
No 120
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.44 E-value=2.4e-08 Score=95.56 Aligned_cols=94 Identities=18% Similarity=0.290 Sum_probs=0.0
Q ss_pred eEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcccchhhhccccchhcc
Q 046022 145 LWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGA 223 (262)
Q Consensus 145 ~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~ 223 (262)
++++.|++++.+|+++|. .++..+||+.++. .+++++||||.+|+ ||- . .+.++++ +
T Consensus 148 Pvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~----------~~~kLvGIvT~RD~-rf~--d-------~~~~V~e--v 205 (556)
T 4af0_A 148 PLCLGPDATVGDVLEIKAKFGFCGVPITETGE----------PDSKLLGIVTGRDV-QFQ--D-------AETPIKS--V 205 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeEcCCCCCHHHHHHHHHHhCCCccccccccC----------cCCEEEEEEecccc-ccc--c-------cceEhhh--h
Confidence 478999999999999998 6889999975432 12455699999995 552 1 1457888 4
Q ss_pred cCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 224 LNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 224 ~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
|+++++++.+..++.+|.++|.++++..+||||++|+
T Consensus 206 MT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~ 242 (556)
T 4af0_A 206 MTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGH 242 (556)
T ss_dssp -------------------------------------
T ss_pred cccceEEecCCCCHHHHHHHHHHccccceeEEccCCc
Confidence 9999999999999999999999999999999999874
No 121
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.39 E-value=3.6e-08 Score=94.59 Aligned_cols=96 Identities=17% Similarity=0.182 Sum_probs=0.0
Q ss_pred eEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcccchhhhccccchhcc
Q 046022 145 LWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGA 223 (262)
Q Consensus 145 ~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~ 223 (262)
++++.+++++.+++++|. ++++++||+.++.. .++++||||..||++. . .....++++ +
T Consensus 107 ~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~----------~g~lvGiVt~~Dl~~~--~------~~~~~~V~d--i 166 (503)
T 1me8_A 107 DSNVKPDQTFADVLAISQRTTHNTVAVTDDGTP----------HGVLLGLVTQRDYPID--L------TQTETKVSD--M 166 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeEECCCCcHHHHHHHHHHcCceEEEEEECCCc----------CCeEEEEEEHHHHHhh--h------ccccCcHHH--H
Confidence 578999999999999998 68999999633200 0234599999999864 1 113457787 4
Q ss_pred cCcC--eEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 224 LNEN--VFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 224 ~~~~--v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
|+++ ++++++++++.+|+++|.+++++.+||||++|.
T Consensus 167 M~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~ 205 (503)
T 1me8_A 167 MTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQH 205 (503)
T ss_dssp ---------------------------------------
T ss_pred hCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCe
Confidence 8876 999999999999999999999999999998764
No 122
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.38 E-value=1.9e-07 Score=80.42 Aligned_cols=65 Identities=9% Similarity=0.214 Sum_probs=51.8
Q ss_pred HHHhhhcceeccccccCCcEEEEcCCCCHHHHHHHHHhCCCceEEEecCCCCcccCCCcccccccccccCcCCeEEEEEe
Q 046022 21 NQRLLREAKVRDLTAEKRRIVEVPHTASLAHTMNALVANKVVAVPVAAPPGQWIGAGGSMIMESDKQTGAVRKHYIGMLT 100 (262)
Q Consensus 21 ~~~~l~~~~v~dlm~~~~~lv~v~~~~tv~eA~~~L~~~~i~s~PVvd~~~~~~~~~~~~~~~~d~~~~~~~~~~vGivs 100 (262)
.+....+.+++|+|.. ++++++++++++.+|++.|.++++.++||+|++ ++++|+|+
T Consensus 178 ~~~~~~~~~v~~im~~-~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~----------------------~~~~Giit 234 (245)
T 3l2b_A 178 SRLIVQSLPVDYVMTK-DNLVAVSTDDLVEDVKVTMSETRYSNYPVIDEN----------------------NKVVGSIA 234 (245)
T ss_dssp HHHGGGGSBHHHHSBC-TTCCCEETTSBHHHHHHHHHHHCCSEEEEECTT----------------------CBEEEEEE
T ss_pred HHHHhcCCceeeEecC-CccEEECCCCcHHHHHHHHHhcCCceEEEEcCC----------------------CeEEEEEE
Confidence 3445567889999963 577899999999999999999999999999875 68999999
Q ss_pred HHHHHHHH
Q 046022 101 MLDILAHI 108 (262)
Q Consensus 101 ~~Dil~~l 108 (262)
..|++++.
T Consensus 235 ~~dll~~~ 242 (245)
T 3l2b_A 235 RFHLISTH 242 (245)
T ss_dssp CC------
T ss_pred HHHhhchh
Confidence 99998764
No 123
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.37 E-value=1.3e-07 Score=90.66 Aligned_cols=101 Identities=15% Similarity=0.145 Sum_probs=71.9
Q ss_pred ccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhccc
Q 046022 131 PVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASE 209 (262)
Q Consensus 131 ~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~ 209 (262)
.+.++|.. + ++++.+++++.+++++|. .++.++||+.+ + ++++||||..|+.. .
T Consensus 90 ~~~~~m~~---d--~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~-~------------~~lvGiVt~rDL~~---~---- 144 (496)
T 4fxs_A 90 IFEAGVVT---H--PVTVRPEQTIADVMELTHYHGFAGFPVVTE-N------------NELVGIITGRDVRF---V---- 144 (496)
T ss_dssp HCCC--CB---C--CCCBCSSSBHHHHHHHHTSSCCCEEEEECS-S------------SBEEEEEEHHHHTT---C----
T ss_pred cccccccc---C--ceEECCCCCHHHHHHHHHHcCCcEEEEEcc-C------------CEEEEEEEHHHHhh---c----
Confidence 45667762 3 578999999999999998 68999999633 2 23459999999851 1
Q ss_pred chhhhccccchhcccC-c-CeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 210 LKDITSHSIRELGALN-E-NVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 210 l~~l~~~ti~eL~~~~-~-~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
.-...+++++ |+ + +++++++++++.+|+++|.++++..+||||++|.
T Consensus 145 --~~~~~~v~di--M~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~ 193 (496)
T 4fxs_A 145 --TDLTKSVAAV--MTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQ 193 (496)
T ss_dssp --CCTTSBGGGT--SEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSB
T ss_pred --ccCCCcHHHH--hcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 1134567874 87 4 5999999999999999999999999999999875
No 124
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.34 E-value=6e-08 Score=92.61 Aligned_cols=101 Identities=14% Similarity=0.197 Sum_probs=1.0
Q ss_pred ccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhccc
Q 046022 131 PVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASE 209 (262)
Q Consensus 131 ~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~ 209 (262)
.+.++|.. + +.++.+++++.+|+++|. +++.++||+ +++ ++++||||..||.+. . +
T Consensus 96 ~~~~iM~~---~--~~~v~~~~tv~ea~~~m~~~~~~~~pVv-d~~------------~~lvGivt~~Dl~~~--~--~- 152 (494)
T 1vrd_A 96 KTENGIIY---D--PITVTPDMTVKEAIDLMAEYKIGGLPVV-DEE------------GRLVGLLTNRDVRFE--K--N- 152 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCcc---C--CeEECCCCCHHHHHHHHHHcCceEEEEE-cCC------------CEEEEEEEHHHHHhh--c--C-
Confidence 35777862 3 678999999999999998 688899996 322 234599999999862 1 1
Q ss_pred chhhhccccchhcccCc--CeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 210 LKDITSHSIRELGALNE--NVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 210 l~~l~~~ti~eL~~~~~--~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
...++++ +|++ +++++++++++.+|+++|.++++..+||||++|.
T Consensus 153 ----~~~~v~~--im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~ 199 (494)
T 1vrd_A 153 ----LSKKIKD--LMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNK 199 (494)
T ss_dssp -----------------------------------------------------
T ss_pred ----CCCcHHH--HhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCe
Confidence 2456777 4887 8999999999999999999999999999998763
No 125
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.26 E-value=1e-07 Score=91.13 Aligned_cols=100 Identities=13% Similarity=0.142 Sum_probs=2.6
Q ss_pred ccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhccc
Q 046022 131 PVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASE 209 (262)
Q Consensus 131 ~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~ 209 (262)
.+.++|.. + +.++.+++++.+++++|. +++.++||+. + +++ +||||..|+. |..
T Consensus 89 ~~~~~m~~---~--~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~--g~l-----------vGIVt~rDl~-~~~----- 143 (490)
T 4avf_A 89 KHETAIVR---D--PVTVTPSTKIIELLQMAREYGFSGFPVVE-Q--GEL-----------VGIVTGRDLR-VKP----- 143 (490)
T ss_dssp HCCC----------------------------------------------------------------------------
T ss_pred ccccCccc---C--ceEeCCCCcHHHHHHHHHHhCCCEEEEEE-C--CEE-----------EEEEEhHHhh-hcc-----
Confidence 46777762 3 578999999999999998 6899999964 2 234 4999999984 221
Q ss_pred chhhhccccchhcccC-c-CeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 210 LKDITSHSIRELGALN-E-NVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 210 l~~l~~~ti~eL~~~~-~-~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
-.+.++++ +|+ + +++++++++++.+|+++|.++++..+||||++|.
T Consensus 144 ---~~~~~V~~--vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~ 191 (490)
T 4avf_A 144 ---NAGDTVAA--IMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFY 191 (490)
T ss_dssp -----------------------------------------------------
T ss_pred ---ccCCcHHH--HhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCc
Confidence 12456777 488 4 6999999999999999999999999999998774
No 126
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.20 E-value=1e-07 Score=91.51 Aligned_cols=106 Identities=13% Similarity=0.147 Sum_probs=57.4
Q ss_pred ccccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhccc
Q 046022 131 PVSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASE 209 (262)
Q Consensus 131 ~V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~ 209 (262)
.+.++|.. + +.++.+++++.+|+++|. ++++++||+.++.. +++++||||..|+.+...
T Consensus 109 ~~~~im~~---~--~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~----------~~~lvGiVt~~Dl~~~~~----- 168 (514)
T 1jcn_A 109 NFEQGFIT---D--PVVLSPSHTVGDVLEAKMRHGFSGIPITETGTM----------GSKLVGIVTSRDIDFLAE----- 168 (514)
T ss_dssp TCCTTSCS---S--CCCCCC-----------------CEESCC------------------CCEECTTTTC---------
T ss_pred hhhhcccc---C--CEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCc----------CCEEEEEEEHHHHHhhhh-----
Confidence 46788862 3 467999999999999998 68899999633100 123459999999876321
Q ss_pred chhhhccccchhcccCc--CeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 210 LKDITSHSIRELGALNE--NVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 210 l~~l~~~ti~eL~~~~~--~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
.....++++ +|++ +++++.+++++.+|+++|.++++..+||||++|.
T Consensus 169 --~~~~~~v~~--vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~ 217 (514)
T 1jcn_A 169 --KDHTTLLSE--VMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDE 217 (514)
T ss_dssp ----------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSC
T ss_pred --ccCCCCHHH--HhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCe
Confidence 112456777 4887 8999999999999999999999999999998774
No 127
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.17 E-value=2e-06 Score=59.26 Aligned_cols=67 Identities=15% Similarity=0.281 Sum_probs=50.2
Q ss_pred eEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcccchhhhccccchhcc
Q 046022 145 LWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASELKDITSHSIRELGA 223 (262)
Q Consensus 145 ~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~l~~l~~~ti~eL~~ 223 (262)
+.++.+++++.+|++.|. ++++++||. ++ +++ +|+||.+||++++..... .....++++ +
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~-d~--~~l-----------~Givt~~dl~~~~~~~~~---~~~~~~v~~--i 62 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVM-EG--DEI-----------LGVVTERDILDKVVAKGK---NPKEVKVEE--I 62 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEE-ET--TEE-----------EEEEEHHHHHHHTTTTTC---CGGGCBGGG--T
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEE-EC--CEE-----------EEEEEHHHHHHHHHHcCC---CcccCCHHH--h
Confidence 578999999999999998 799999996 33 233 599999999998865421 123567777 4
Q ss_pred cCcCeEE
Q 046022 224 LNENVFA 230 (262)
Q Consensus 224 ~~~~v~t 230 (262)
|++++++
T Consensus 63 m~~~~~~ 69 (70)
T 3fio_A 63 MTKNPVK 69 (70)
T ss_dssp CEECTTC
T ss_pred cCCCCeE
Confidence 7776654
No 128
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.03 E-value=6.6e-07 Score=85.37 Aligned_cols=97 Identities=21% Similarity=0.389 Sum_probs=0.9
Q ss_pred cccccccCCCCCeeEEeCCCCCHHHHHHHHh-cCCCeeEeecCCCCcccccceecccCCeeeEecHHHHHHHHHhhcccc
Q 046022 132 VSSIIGHCPEGLSLWTLSPNTSILDCMEVFS-KGIHRALVPMDSRMENISGVELVESASSYQMLTQMDLLRFMMNHASEL 210 (262)
Q Consensus 132 V~~im~~~~~~~~~~~v~~~~sL~~a~~~m~-~g~~rv~V~~~~~~~~~~g~~~~~~~~~~giITqsDIir~L~~~~~~l 210 (262)
+.++|.. + ++++.+++++.+++++|. .+..++||+ ++ +++ +|+||..|+++ .
T Consensus 95 ~~~~m~~---~--~~~v~~~~tv~ea~~~~~~~~~~~~pVv-d~--~~l-----------vGivt~~Dl~~---~----- 147 (486)
T 2cu0_A 95 AERLIVE---D--VITIAPDETVDFALFLMEKHGIDGLPVV-ED--EKV-----------VGIITKKDIAA---R----- 147 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhcccc---C--ceEECCCCCHHHHHHHHHHcCCcEEEEE-EC--CEE-----------EEEEEHHHhcc---C-----
Confidence 3556652 3 678999999999999998 688899996 33 234 49999999875 1
Q ss_pred hhhhccccchhcccCcCeEEEeCCCcHHHHHHHHHhCCCcEEEEEcCCCC
Q 046022 211 KDITSHSIRELGALNENVFAITESTKVIDAIKCMRAALLHAVPIVKSSGA 260 (262)
Q Consensus 211 ~~l~~~ti~eL~~~~~~v~tv~~~~~~~~A~~lM~~~~isav~VVd~~g~ 260 (262)
...++++ +|+++++++++++++.+|+++|.++++..+||||++|.
T Consensus 148 ---~~~~v~~--im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~ 192 (486)
T 2cu0_A 148 ---EGKLVKE--LMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGK 192 (486)
T ss_dssp --------------------------------------------------
T ss_pred ---CCCCHHH--HccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCe
Confidence 2456777 48888999999999999999999999999999998763
No 129
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=20.15 E-value=33 Score=25.36 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=32.7
Q ss_pred hHHHHHhhhcceeccccccCCcEEE-E----cCCCCHHHHHHHHHhCC-CceEEEecCC
Q 046022 18 ADENQRLLREAKVRDLTAEKRRIVE-V----PHTASLAHTMNALVANK-VVAVPVAAPP 70 (262)
Q Consensus 18 ~~~~~~~l~~~~v~dlm~~~~~lv~-v----~~~~tv~eA~~~L~~~~-i~s~PVvd~~ 70 (262)
.+++++++...-+.+++..+..... + ..+.+-.+++++|.+|. ...-||+..+
T Consensus 44 ~~~l~~~~~~~g~~~l~n~~~~~~k~l~~~~~~~~~~~~~~~~l~~~p~likrPiv~~~ 102 (120)
T 2kok_A 44 AETLDRFLKTVPWEQLLNRAGTTFRKLPEDVRSNVDAASARELMLAQPSMVKRPVLERD 102 (120)
T ss_dssp HHHHHHHHHHSCGGGTBCSSSHHHHHSCHHHHHSCCHHHHHHHHHHCGGGBCSSEEEET
T ss_pred HHHHHHHHHHcChHhhccCCchhhHhcCchhhccCCHHHHHHHHHhCcccEECCEEEEC
Confidence 3455556555556777754322110 0 11568899999999998 5578988643
Done!