BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046023
(383 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 174/421 (41%), Gaps = 66/421 (15%)
Query: 1 IKIPPRPQGLPFIGNVHQFDFSK-PQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKE 59
+K PP P G P IG H K P + L +S+ YG + + +G P++V+S + ++
Sbjct: 10 LKNPPGPWGWPLIG--HMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQ 67
Query: 60 SLKTHDIQFCSRLAKIRKLCVSHLFNPSRAQSFRP---------------------IRED 98
+L F R L L + ++ SF P I D
Sbjct: 68 ALVRQGDDFKGR----PDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASD 123
Query: 99 EVSR----MIEYISKSAASKQVNLSGIMMSLA------------SNIICRIGFGKRHGNE 142
S + E++SK A L +M +N+IC I FG+R+ +
Sbjct: 124 PASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHN 183
Query: 143 YEAISGRSRFLTFFTEIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQEL 202
++ + F E+ S D+ P + ++ + + +K +F Q++
Sbjct: 184 HQELLSLVNLNNNFGEVVGSGNP---ADFIPILRYLPNPS--LNAFKDLNEKFYSFMQKM 238
Query: 203 NDEHKDPNITKAELQQEDIVDVLLQ----VQKDHGFKVDLTLDHIYKHTHICAICFANG- 257
EH K ++ DI D L++ Q D V L+ + I +I F G
Sbjct: 239 VKEHYK-TFEKGHIR--DITDSLIEHCQEKQLDENANVQLSDEKI---INIVLDLFGAGF 292
Query: 258 ----STVVWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQ 313
+ + W++ YL+ +PR +K+QEE+ ++IG D + Y++A + T R
Sbjct: 293 DTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHS 352
Query: 314 SPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFI--DCSI 371
S +P +P + G+ I V+V W I D + W NP EF PERF+ D +I
Sbjct: 353 SFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAI 412
Query: 372 D 372
D
Sbjct: 413 D 413
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 169/407 (41%), Gaps = 48/407 (11%)
Query: 1 IKIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKES 60
+K PP P G P +G+V P + L +S+ YG + + +G P++V+S + +++
Sbjct: 15 LKSPPEPWGWPLLGHVLTLG-KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQA 73
Query: 61 LKTHDIQFCSR--------LAKIRKLCVSHLFNPSRAQSFR---------PIREDEVSR- 102
L F R + + L S P A R I D S
Sbjct: 74 LVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSS 133
Query: 103 ---MIEYISKSAASKQVNLSGIMMSLA------------SNIICRIGFGKRHGNEYEAIS 147
+ E++SK A + L +M +N+I + FG+ + +
Sbjct: 134 SCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEML 193
Query: 148 GRSRFLTFFTEIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHK 207
+ F E +S D+FP + ++ ++R + + Q+ F Q+ EH
Sbjct: 194 SLVKNTHEFVETASSGNPL---DFFPILRYLPN--PALQRFKAFNQRFLWFLQKTVQEHY 248
Query: 208 DPNITKAELQQEDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANG-----STVVW 262
+ K ++ DI L + K G + L K ++ F G + + W
Sbjct: 249 Q-DFDKNSVR--DITGALFKHSKK-GPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISW 304
Query: 263 AMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPK 322
++ YL+ P +K+Q+E+ ++IG + D ++ YL+A + T R S +P +P
Sbjct: 305 SLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPH 364
Query: 323 EIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDC 369
++G+ I K V+V W + DPE WE+P EF PERF+
Sbjct: 365 STTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTA 411
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 181/415 (43%), Gaps = 47/415 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LP +GN+ Q D L + YG +++LG P++V+ + +E+L
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 62 KTHDIQFCSR--LAKIRKLCVSHLFNPSRAQSFRPIR---------------------ED 98
F R +A + + + + + +R +R ++
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQE 129
Query: 99 EVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTE 158
E ++E + KS + N + + S+ SNIIC I FGKR + R L F +
Sbjct: 130 EARCLVEELRKSKGALLDN-TLLFHSITSNIICSIVFGKRFDYKDPVF---LRLLDLFFQ 185
Query: 159 IQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHK---DPNITKAE 215
+ F + F G++ G R++ Q+ +TF + ++H+ DP+
Sbjct: 186 SFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS----- 240
Query: 216 LQQEDIVDV-LLQVQKDHGFKVDLTLDHIYKH--THICAICFANGSTVVWAMTY----LM 268
D +DV LL+++KD K D + + +++ + ++ FA T + Y ++
Sbjct: 241 -NPRDFIDVYLLRMEKD---KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLML 296
Query: 269 KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKC 328
K+P ++VQ+EI +IG D ++ Y AV+ RL IP VP + +
Sbjct: 297 KYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT 356
Query: 329 LIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
GY I T V+ + DP +E P FNP F+D + K +N F+PF
Sbjct: 357 QFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPF 410
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 182/415 (43%), Gaps = 47/415 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LP +GN+ Q D L + YG +++LG P++V+ + +E+L
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 62 KTHDIQFCSR--LAKIRKLCVSHLFNPSRAQSFRPIR---------------------ED 98
F R +A + + + + + +R +R ++
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQE 129
Query: 99 EVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTE 158
E ++E + KS + N + + S+ SNIIC I FGKR + R L F +
Sbjct: 130 EARCLVEELRKSKGALLDN-TLLFHSITSNIICSIVFGKRFDYKDPVF---LRLLDLFFQ 185
Query: 159 IQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHK---DPNITKAE 215
+ F + F G++ G R++ Q+ +TF + ++H+ DP+
Sbjct: 186 SFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS----- 240
Query: 216 LQQEDIVDV-LLQVQKDHGFKVDLTLDHIYKHTHICAIC-FANG-----STVVWAMTYLM 268
D +DV LL+++KD K D + + +++ + + FA G +T+ + ++
Sbjct: 241 -NPRDFIDVYLLRMEKD---KSDPSSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLML 296
Query: 269 KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKC 328
K+P ++VQ+EI +IG D ++ Y AV+ RL IP VP + +
Sbjct: 297 KYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT 356
Query: 329 LIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
GY I T V+ + DP +E P FNP F+D + K +N F+PF
Sbjct: 357 QFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPF 410
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 181/415 (43%), Gaps = 47/415 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LP +GN+ Q D L + YG +++LG P++V+ + +E+L
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 62 KTHDIQFCSR--LAKIRKLCVSHLFNPSRAQSFRPIR---------------------ED 98
F R +A + + + + + +R +R ++
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQE 129
Query: 99 EVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTE 158
E ++E + KS + N + + S+ SNIIC I FGKR + R L F +
Sbjct: 130 EARCLVEELRKSKGALLDN-TLLFHSITSNIICSIVFGKRFDYKDPVF---LRLLDLFFQ 185
Query: 159 IQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHK---DPNITKAE 215
+ F + F G++ G R++ Q+ +TF + ++H+ DP+
Sbjct: 186 SFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS----- 240
Query: 216 LQQEDIVDV-LLQVQKDHGFKVDLTLDHIYKH--THICAICFANGSTVVWAMTY----LM 268
D +DV LL+++KD K D + + +++ + ++ FA T + Y ++
Sbjct: 241 -NPRDFIDVYLLRMEKD---KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLML 296
Query: 269 KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKC 328
K+P ++VQ+EI +IG D ++ Y AV+ RL IP VP + +
Sbjct: 297 KYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT 356
Query: 329 LIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
GY I T V+ + DP +E P FNP F+D + K +N F+PF
Sbjct: 357 QFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPF 410
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 181/415 (43%), Gaps = 47/415 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LP +GN+ Q D L + YG +++LG P++V+ + +E+L
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 62 KTHDIQFCSR--LAKIRKLCVSHLFNPSRAQSFRPIR---------------------ED 98
F R +A + + + + + +R +R ++
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQE 129
Query: 99 EVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTE 158
E ++E + KS + N + + S+ SNIIC I FGKR + R L F +
Sbjct: 130 EARCLVEELRKSKGALLDN-TLLFHSITSNIICSIVFGKRFDYKDPVF---LRLLDLFFQ 185
Query: 159 IQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHK---DPNITKAE 215
+ F + F G++ G R++ Q+ +TF + ++H+ DP+
Sbjct: 186 SFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS----- 240
Query: 216 LQQEDIVDV-LLQVQKDHGFKVDLTLDHIYKH--THICAICFANGSTVVWAMTY----LM 268
D +DV LL+++KD K D + + +++ + ++ FA T + Y ++
Sbjct: 241 -NPRDFIDVYLLRMEKD---KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLML 296
Query: 269 KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKC 328
K+P ++VQ+EI +IG D ++ Y AV+ RL IP VP + +
Sbjct: 297 KYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT 356
Query: 329 LIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
GY I T V+ + DP +E P FNP F+D + K +N F+PF
Sbjct: 357 QFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPF 410
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 181/415 (43%), Gaps = 47/415 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LP +GN+ Q D L + YG +++LG P++V+ + +E+L
Sbjct: 10 KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 62 KTHDIQFCSR--LAKIRKLCVSHLFNPSRAQSFRPIR---------------------ED 98
F R +A + + + + + +R +R ++
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQE 129
Query: 99 EVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTE 158
E ++E + KS + N + + S+ SNIIC I FGKR + R L F +
Sbjct: 130 EARCLVEELRKSKGALLDN-TLLFHSITSNIICSIVFGKRFDYKDPVF---LRLLDLFFQ 185
Query: 159 IQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHK---DPNITKAE 215
+ F + F G++ G R++ Q+ +TF + ++H+ DP+
Sbjct: 186 SFSLISSFSSQVFELFSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS----- 240
Query: 216 LQQEDIVDV-LLQVQKDHGFKVDLTLDHIYKH--THICAICFANGSTVVWAMTY----LM 268
D +DV LL+++KD K D + + +++ + ++ FA T + Y ++
Sbjct: 241 -NPRDFIDVYLLRMEKD---KSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLML 296
Query: 269 KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKC 328
K+P ++VQ+EI +IG D ++ Y AV+ RL IP VP + +
Sbjct: 297 KYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT 356
Query: 329 LIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
GY I T V+ + DP +E P FNP F+D + K +N F+PF
Sbjct: 357 QFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPF 410
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 176/408 (43%), Gaps = 37/408 (9%)
Query: 4 PPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESLKT 63
PP P LP IGN+ Q L LSK+YGP +L+ G+ PI+V+ E KE+L
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 64 HDIQFCSR----LA------------------KIRKLCVSHLFNPSRAQSFRPIREDEVS 101
+F R LA +IR+ + L N + R E +
Sbjct: 71 LGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEA 130
Query: 102 R-MIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTEIQ 160
R ++E + K+ AS + + I+ N+IC I F KR + + L EI
Sbjct: 131 RCLVEELRKTKASP-CDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIEIL 189
Query: 161 ASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHKDPNITKAELQQED 220
+SP ++ Y F +D G +L ++ E EH++ + +D
Sbjct: 190 SSP---WIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQE---SMDMNNPQD 243
Query: 221 IVDV-LLQVQKD-HGFKVDLTLDHIYKHTHI---CAICFANGSTVVWAMTYLMKHPRAMK 275
+D L++++K+ H + T++ + ++T + A +T+ +A+ L+KHP
Sbjct: 244 FIDCFLMKMEKEKHNQPSEFTIESL-ENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTA 302
Query: 276 KVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEI 335
KVQEEI +IG D + Y AV+ R +P +P + Y I
Sbjct: 303 KVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLI 362
Query: 336 RAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
T + + ++ D + + NPE F+P F+D ++K+ F+PF
Sbjct: 363 PKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPF 409
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 181/416 (43%), Gaps = 49/416 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LP IGN+ Q L LSK+YGP +L+ G+ PI+V+ E KE+L
Sbjct: 11 KLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEAL 70
Query: 62 KTHDIQFCSR----LA------------------KIRKLCVSHLFNPSRAQSFRPIREDE 99
+F R LA +IR+ + L N + R E
Sbjct: 71 IDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQE 130
Query: 100 VSR-MIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTE 158
+R ++E + K+ AS + + I+ N+IC I F KR + + L +
Sbjct: 131 EARCLVEELRKTKASP-CDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIK 189
Query: 159 IQASP----VGFF--VTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHKDPNIT 212
I +SP F + DYFP G +KL + ++ Y + +QE D +
Sbjct: 190 ILSSPWIQICNNFSPIIDYFP--GTHNKLLKNVAFMKSYILEKVKEHQESMDMN------ 241
Query: 213 KAELQQEDIVDV-LLQVQKD-HGFKVDLTLDHIYKHTHI---CAICFANGSTVVWAMTYL 267
+D +D L++++K+ H + T++ + ++T + A +T+ +A+ L
Sbjct: 242 ----NPQDFIDCFLMKMEKEKHNQPSEFTIESL-ENTAVDLFGAGTETTSTTLRYALLLL 296
Query: 268 MKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEK 327
+KHP KVQEEI +IG D + Y AV+ R +P +P +
Sbjct: 297 LKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCD 356
Query: 328 CLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
Y I T + + ++ D + + NPE F+P F+D ++K+ F+PF
Sbjct: 357 IKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPF 411
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 180/411 (43%), Gaps = 39/411 (9%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LP IGN+ Q D L LSKIYGP +L+ G+ ++V+ E+ KE+L
Sbjct: 11 KLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEAL 70
Query: 62 KTHDIQFCSR----LA------------------KIRKLCVSHLFNPSRAQSFRPIREDE 99
+F R LA +IR+ + L N + R E
Sbjct: 71 IDLGEEFSGRGHFPLAERANRGFGIVFSNGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQE 130
Query: 100 VSR-MIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTE 158
+R ++E + K+ AS + + I+ N+IC I F KR + + L
Sbjct: 131 EARCLVEELRKTKASP-CDPTFILGCAPCNVICSIIFQKRFDYKDQQFLNLMEKLNENIR 189
Query: 159 IQASPVGFFVTDYFPFMGWIDKLRGMMRRL--EIYFQKADTFYQELNDEHKDPNITKAEL 216
I ++P + + FP + ID G +L + F ++D +++ + + +I
Sbjct: 190 IVSTP-WIQICNNFPTI--IDYFPGTHNKLLKNLAFMESDIL-EKVKEHQESMDINNP-- 243
Query: 217 QQEDIVDV-LLQVQKD-HGFKVDLTLDH--IYKHTHICAICFANGSTVVWAMTYLMKHPR 272
D +D L++++K+ + + T+++ I + A +T+ +A+ L+KHP
Sbjct: 244 --RDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPE 301
Query: 273 AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDG 332
KVQEEI ++G D + Y AV+ R IP +P +
Sbjct: 302 VTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRN 361
Query: 333 YEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
Y I T + ++ D + + NPE F+P F+D ++K+ N F+PF
Sbjct: 362 YLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-FMPF 411
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 176/416 (42%), Gaps = 49/416 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LPFIGN Q + + L ++S+ YGP ++HLG ++V+ + +E+L
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 62 --------------------KTHDIQFCS--RLAKIRKLCVSHLFNPSRAQSFRPIRE-- 97
K + + F + R ++R+ ++ L + + R I E
Sbjct: 70 VDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGK--RGIEERI 127
Query: 98 -DEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFF 156
+E +I+ + + ++ + + SN+I I FG R + + R +
Sbjct: 128 QEEAGFLIDAL-RGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGS 186
Query: 157 TEIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQ---ELNDEHKDPNITK 213
+ ++ G Y F + L G ++ Q + F E N DPN +
Sbjct: 187 FQFTSTSTGQL---YEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR 243
Query: 214 AELQQEDIVDVLL--QVQKDHGFKVDLTLDHIYKHTHICAICFANGSTVVWAMTY----L 267
D +D L +++ + L ++ T + FA TV + Y L
Sbjct: 244 ------DFIDSFLIRMQEEEKNPNTEFYLKNLVMTT--LNLFFAGTETVSTTLRYGFLLL 295
Query: 268 MKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEK 327
MKHP KV EEI +IG D ++ Y++AV+ R IP+ + + + +
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKD 355
Query: 328 CLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
+ + T VY ++ RDP + NP++FNP+ F++ +K+ + F+PF
Sbjct: 356 TKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPF 410
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 172/416 (41%), Gaps = 49/416 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LPFIGN Q + + L ++S+ YGP ++HLG ++V+ + KE+L
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEAL 69
Query: 62 --------------------KTHDIQFCS--RLAKIRKLCVSHLFNPSRAQSFRPIRE-- 97
K + + F + R ++R+ ++ L + R I E
Sbjct: 70 VDQAEEFSGRGEQATFDWLFKGYGVAFSNGERAKQLRRFSIATLRGFGVGK--RGIEERI 127
Query: 98 -DEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFF 156
+E +I+ + + ++ + + SN+I I FG R E + R +
Sbjct: 128 QEEAGFLIDAL-RGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGS 186
Query: 157 TEIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQ---ELNDEHKDPNITK 213
+ A+ G Y F + L G ++ Q + F E N DPN +
Sbjct: 187 FQFTATSTGQL---YEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPR 243
Query: 214 AELQQEDIVDVLL--QVQKDHGFKVDLTLDHIYKHTHICAICFANGSTVVWAMTY----L 267
D +D L +++ + L ++ T + FA TV + Y L
Sbjct: 244 ------DFIDSFLIRMQEEEKNPNTEFYLKNLVMTT--LNLFFAGTETVSTTLRYGFLLL 295
Query: 268 MKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEK 327
MKHP KV EEI +IG D ++ Y +AV+ R +P+ + + +
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKD 355
Query: 328 CLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
+ + T V+ ++ RDP + NP +FNP+ F+D +K+ + F+PF
Sbjct: 356 TKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSD-AFVPF 410
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 177/416 (42%), Gaps = 49/416 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LPFIGN Q + + L ++S+ YGP ++HLG ++V+ + +E+L
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 62 --------------------KTHDIQFCS--RLAKIRKLCVSHLFNPSRAQSFRPIRE-- 97
K + + F + R ++R+ ++ L + + R I E
Sbjct: 70 VDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGK--RGIEERI 127
Query: 98 -DEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFF 156
+E +I+ + + ++ + + SN+I I FG R + + R +
Sbjct: 128 QEEAGFLIDAL-RGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGI 186
Query: 157 TEIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQ---ELNDEHKDPNITK 213
+ ++ G Y F + L G ++ Q + F E N DPN +
Sbjct: 187 FQFTSTSTGQL---YEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR 243
Query: 214 AELQQEDIVD-VLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGS-----TVVWAMTYL 267
D +D L+++Q++ K T ++ F G+ T+ + L
Sbjct: 244 ------DFIDSFLIRMQEEE--KNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLL 295
Query: 268 MKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEK 327
MKHP KV EEI +IG D ++ Y++AV+ R IP+ + + + +
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
Query: 328 CLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
+ + T VY ++ RDP + NP++FNP+ F++ +K+ + F+PF
Sbjct: 356 TKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPF 410
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 177/416 (42%), Gaps = 49/416 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LPFIGN Q + + L ++S+ YGP ++HLG ++V+ + +E+L
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 62 --------------------KTHDIQFCS--RLAKIRKLCVSHLFNPSRAQSFRPIRE-- 97
K + + F + R ++R+ ++ L + + R I E
Sbjct: 70 VDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGK--RGIEERI 127
Query: 98 -DEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFF 156
+E +I+ + + ++ + + SN+I I FG R + + R +
Sbjct: 128 QEEAGFLIDAL-RGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGI 186
Query: 157 TEIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQ---ELNDEHKDPNITK 213
+ ++ G Y F + L G ++ Q + F E N DPN +
Sbjct: 187 FQFTSTSTGQL---YEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR 243
Query: 214 AELQQEDIVD-VLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGS-----TVVWAMTYL 267
D +D L+++Q++ K T ++ F G+ T+ + L
Sbjct: 244 ------DFIDSFLIRMQEEE--KNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLL 295
Query: 268 MKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEK 327
MKHP KV EEI +IG D ++ Y++AV+ R IP+ + + + +
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
Query: 328 CLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
+ + T VY ++ RDP + NP++FNP+ F++ +K+ + F+PF
Sbjct: 356 TKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPF 410
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 177/416 (42%), Gaps = 49/416 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LPFIGN Q + + L ++S+ YGP ++HLG ++V+ + +E+L
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 62 --------------------KTHDIQFCS--RLAKIRKLCVSHLFNPSRAQSFRPIRE-- 97
K + + F + R ++R+ ++ L + + R I E
Sbjct: 70 VDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGK--RGIEERI 127
Query: 98 -DEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFF 156
+E +I+ + + ++ + + SN+I I FG R + + R +
Sbjct: 128 QEEAGFLIDAL-RGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGI 186
Query: 157 TEIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQ---ELNDEHKDPNITK 213
+ ++ G Y F + L G ++ Q + F E N DPN +
Sbjct: 187 FQFTSTSTGQL---YEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR 243
Query: 214 AELQQEDIVD-VLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGS-----TVVWAMTYL 267
D +D L+++Q++ K T ++ F G+ T+ + L
Sbjct: 244 ------DFIDSFLIRMQEEE--KNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLL 295
Query: 268 MKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEK 327
MKHP KV EEI +IG D ++ Y++AV+ R IP+ + + + +
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
Query: 328 CLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
+ + T VY ++ RDP + NP++FNP+ F++ +K+ + F+PF
Sbjct: 356 TKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPF 410
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 177/416 (42%), Gaps = 49/416 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LPFIGN Q + + L ++S+ YGP ++HLG ++V+ + +E+L
Sbjct: 10 KLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREAL 69
Query: 62 --------------------KTHDIQFCS--RLAKIRKLCVSHLFNPSRAQSFRPIRE-- 97
K + + F + R ++R+ ++ L + + R I E
Sbjct: 70 VDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGK--RGIEERI 127
Query: 98 -DEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFF 156
+E +I+ + + ++ + + SN+I I FG R + + R +
Sbjct: 128 QEEAGFLIDAL-RGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGI 186
Query: 157 TEIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQ---ELNDEHKDPNITK 213
+ ++ G Y F + L G ++ Q + F E N DPN +
Sbjct: 187 FQFTSTSTGQL---YEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPR 243
Query: 214 AELQQEDIVD-VLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGS-----TVVWAMTYL 267
D +D L+++Q++ K T ++ F G+ T+ + L
Sbjct: 244 ------DFIDSFLIRMQEEE--KNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLL 295
Query: 268 MKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEK 327
MKHP KV EEI +IG D ++ Y++AV+ R IP+ + + + +
Sbjct: 296 MKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
Query: 328 CLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
+ + T VY ++ RDP + NP++FNP+ F++ +K+ + F+PF
Sbjct: 356 TKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AFVPF 410
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 174/413 (42%), Gaps = 46/413 (11%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P P IGN+ Q D L + S+ YGP +++LG+ P +V+ E KE+L
Sbjct: 10 KLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEAL 69
Query: 62 KTHDIQFCSR-----LAKIRK-LCVSHLFNPSRAQSFRPIR------------------- 96
+F R L K+ K L ++ S A++++ +R
Sbjct: 70 VDLGEEFAGRGSVPILEKVSKGLGIAF----SNAKTWKEMRRFSLMTLRNFGMGKRSIED 125
Query: 97 --EDEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLT 154
++E ++E + K+ AS + + I+ N+IC + F R + E L
Sbjct: 126 RIQEEARCLVEELRKTNASP-CDPTFILGCAPCNVICSVIFHNRFDYKDEEFLKLMESLH 184
Query: 155 FFTEIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHK---DPNI 211
E+ +P ++ Y F +D G+ + L F E EH+ D N
Sbjct: 185 ENVELLGTP---WLQVYNNFPALLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLDVN- 240
Query: 212 TKAELQQEDIVDV-LLQVQKDHGFKVDLTLDHIYKHTHICAICFANGSTVVWAMTYLMKH 270
D +D L+++++++ + L I A +T+ +++ L+KH
Sbjct: 241 -----NPRDFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLLKH 295
Query: 271 PRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLI 330
P +VQEEI +IG D + Y AV+ R +P +P +
Sbjct: 296 PEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRF 355
Query: 331 DGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
Y I T + ++ D +A+ NP+ F+P F+D S ++K+ + F+PF
Sbjct: 356 RNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPF 407
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 174/417 (41%), Gaps = 51/417 (12%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LP IGN+ Q D SK+YGP +++ G+ PI+V E KE+L
Sbjct: 10 KLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEAL 69
Query: 62 KTHDIQFCS----------------------RLAKIRKLCVSHLFNPSRAQ-SFRPIRED 98
+ +F R +IR+ ++ L N + S ++
Sbjct: 70 IDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQE 129
Query: 99 EVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHG-NEYEAISGRSRFLTFFT 157
E ++E + K+ AS + + I+ N+IC + F KR + ++ RF F
Sbjct: 130 EAHCLVEELRKTKASP-CDPTFILGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFNENF- 187
Query: 158 EIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHK---DPNITKA 214
I SP V + FP + ID G ++ ++ +E EH+ D N
Sbjct: 188 RILNSP-WIQVCNNFPLL--IDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVN---- 240
Query: 215 ELQQEDIVDVLL---QVQKDHGFKVDLTLDHIYKHTHICAICFANG-----STVVWAMTY 266
D +D L + +KD+ K + ++++ A F G +T+ + +
Sbjct: 241 --NPRDFIDCFLIKMEQEKDNQ-KSEFNIENL---VGTVADLFVAGTETTSTTLRYGLLL 294
Query: 267 LMKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIME 326
L+KHP KVQEEI +IG D + Y AV+ R +P VP +
Sbjct: 295 LLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTT 354
Query: 327 KCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
Y I T + ++ D + + NP F+P F+D + ++K+ + F+PF
Sbjct: 355 DTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPF 410
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 164/381 (43%), Gaps = 45/381 (11%)
Query: 35 YGPFISLHLGVVPIIVVSSAEMAKESLKTHDIQFCSR----------------LAKIRKL 78
YG ++HLG P++++ E +E+L F R A +
Sbjct: 43 YGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRW 102
Query: 79 CVSHLFNPSRAQSF----RPIRE---DEVSRMIEYISKSAASKQVNLSGIMMSLASNIIC 131
V F+ + + F R + E +E +IE + KS + ++ + + S+ +NIIC
Sbjct: 103 KVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGA-LMDPTFLFQSITANIIC 161
Query: 132 RIGFGKR-HGNEYEAISGRSRFLTFFTEIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEI 190
I FGKR H + E + + F F+ I + F + F G++ G R++
Sbjct: 162 SIVFGKRFHYQDQEFLKMLNLFYQTFSLISS----VFGQLFELFSGFLKHFPGAHRQVYK 217
Query: 191 YFQKADTFYQELNDEHK---DPNITKAELQQEDIVDV-LLQVQKDHGFKVDLTLDHIYKH 246
Q+ + + ++H+ DP+ + D++D LL ++K+ H +
Sbjct: 218 NLQEINAYIGHSVEKHRETLDPSAPR------DLIDTYLLHMEKEKS-NAHSEFSHQNLN 270
Query: 247 THICAICFANGSTVVWAMTY----LMKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYL 302
+ ++ FA T + Y ++K+P ++V EI +IG + D ++ Y
Sbjct: 271 LNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYT 330
Query: 303 KAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFN 362
+AV+ R +P+ VP + + GY I T V++ DP +E P+ FN
Sbjct: 331 EAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFN 390
Query: 363 PERFIDCSIDYKEQNLEFIPF 383
P+ F+D + K+ FIPF
Sbjct: 391 PDHFLDANGALKKTE-AFIPF 410
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 176/416 (42%), Gaps = 50/416 (12%)
Query: 2 KIPPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
K+PP P LP IGN+ Q + L++ +GP +L++G ++V+ + KE+L
Sbjct: 10 KLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEAL 69
Query: 62 KTHDIQFCSR---------------------LAKIRKLCVSHLFNPSRAQSFRPIR-EDE 99
+ +F R IR+ ++ L N + R + E
Sbjct: 70 LDYKDEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQRE 129
Query: 100 VSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTE- 158
++E + K+ + + + ++ N+I I F K E R + F E
Sbjct: 130 AHFLLEALRKTQG-QPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFL---RLMYLFNEN 185
Query: 159 --IQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHK---DPNITK 213
+ ++P ++ Y F ++ L G R++ + + E EH DPN +
Sbjct: 186 FHLLSTP---WLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPR 242
Query: 214 AELQQEDIVDVLL-QVQKD-HGFKVDLTLDHIYKHTHICAICFANGSTVVWAMTY----L 267
D+ D LL +++K+ H + T+D I + + FA T + Y L
Sbjct: 243 ------DLTDCLLVEMEKEKHSAERLYTMDGIT--VTVADLFFAGTETTSTTLRYGLLIL 294
Query: 268 MKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEK 327
MK+P +K+ EEI +IG D QE+ Y+ AV+ R + +P +P E
Sbjct: 295 MKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRD 354
Query: 328 CLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
+ GY I T+V ++ D + + +PE+F PE F++ + +K + F PF
Sbjct: 355 TIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY-FKPF 409
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 158/406 (38%), Gaps = 50/406 (12%)
Query: 4 PPRPQGLPFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESLKT 63
PP P P IGN + L++ YG + LG PI+V++ ++L
Sbjct: 11 PPGPFAWPLIGNAAAVG-QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 69
Query: 64 HDIQFCSR--------LAKIRKLCVSHLFNPSRAQSFRPIREDEVSRMIEYISKSAASKQ 115
F R ++ R + H ++ ++ R S M + ++ S+Q
Sbjct: 70 QGSAFADRPSFASFRVVSGGRSMAFGHY-----SEHWKVQRRAAHSMMRNFFTRQPRSRQ 124
Query: 116 VNLSGIMMSLASNIICRIGFGKRHG--------------NEYEAISGRSRF--------- 152
V L G ++S A ++ + G G N A+ R+
Sbjct: 125 V-LEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRE 183
Query: 153 -LTFFTEIQASPVGFFVTDYFPFMGWI-DKLRGMMRRLEIYFQKADTFYQELNDEHKD-- 208
L+ E + + D P++ + + +R + R E + F + H +
Sbjct: 184 LLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESL 243
Query: 209 -PNITKAELQQEDIVDVLLQVQKD-HGFKVDLTLDHIYKHTHICAICFANGSTVVWAMTY 266
P ++ I+ + D HG L L+++ I I A+ T+ A+ +
Sbjct: 244 RPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENV--PATITDIFGASQDTLSTALQW 301
Query: 267 LM----KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPK 322
L+ ++P +VQ E+ ++G D + Y+ A L +R S +P+ +P
Sbjct: 302 LLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPH 361
Query: 323 EIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFID 368
+ GY I T+V+V W++ DP W NPE F+P RF+D
Sbjct: 362 ATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLD 407
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 164/391 (41%), Gaps = 42/391 (10%)
Query: 24 PQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESLKTHDIQFCSR-----LAKIRKL 78
P V + + S++YG SL LG + +V++ ++ KE L F R K+ K+
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKM 95
Query: 79 CVSHLFNPSRAQSFRPIREDEVS--RMIEYISKSAASKQV------------------NL 118
L N + + R V+ R Y KS SK + +
Sbjct: 96 --GGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDF 153
Query: 119 SGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTEIQASPVGFFVTDYFPFMGWI 178
++ + SNI I FG+R E + E+ AS F+ + FP++G +
Sbjct: 154 KQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAAS-ASVFLYNAFPWIGIL 212
Query: 179 DKLRGMMRRLEIYFQKADTFYQELNDEHKDPNITKAELQQEDIVDVLLQVQKDHGFKVD- 237
G ++L F+ A Y L+ + ++ + + VD L + D G K D
Sbjct: 213 P--FGKHQQL---FRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLD-EMDQG-KNDP 265
Query: 238 ---LTLDHIYKHTHICAICFANGSTVV--WAMTYLMKHPRAMKKVQEEIRSLIGCKGFVD 292
+ +++ I +T V WA+ ++ +P +VQ+EI ++G G
Sbjct: 266 SSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPS 325
Query: 293 EVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDP 352
D ++ Y +AVL LR + +PL + E ++ GY I T V +++ D
Sbjct: 326 WDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDE 385
Query: 353 EAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
+ W +PE F+PERF+D S Y + +PF
Sbjct: 386 KYWRDPEVFHPERFLDSS-GYFAKKEALVPF 415
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 164/391 (41%), Gaps = 42/391 (10%)
Query: 24 PQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESLKTHDIQFCSR-----LAKIRKL 78
P V + + S++YG SL LG + +V++ ++ KE L F R K+ K+
Sbjct: 36 PHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKM 95
Query: 79 CVSHLFNPSRAQSFRPIREDEVS--RMIEYISKSAASKQV------------------NL 118
L N + + R V+ R Y KS SK + +
Sbjct: 96 --GGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDF 153
Query: 119 SGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTEIQASPVGFFVTDYFPFMGWI 178
++ + SNI I FG+R E + E+ AS F+ + FP++G +
Sbjct: 154 KQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAAS-ASVFLYNAFPWIGIL 212
Query: 179 DKLRGMMRRLEIYFQKADTFYQELNDEHKDPNITKAELQQEDIVDVLLQVQKDHGFKVD- 237
G ++L F+ A Y L+ + ++ + + VD L + D G K D
Sbjct: 213 P--FGKHQQL---FRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLD-EMDQG-KNDP 265
Query: 238 ---LTLDHIYKHTHICAICFANGSTVV--WAMTYLMKHPRAMKKVQEEIRSLIGCKGFVD 292
+ +++ I +T V WA+ ++ +P +VQ+EI ++G G
Sbjct: 266 SSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPS 325
Query: 293 EVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDP 352
D ++ Y +AVL LR + +PL + E ++ GY I T V +++ D
Sbjct: 326 WDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDE 385
Query: 353 EAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
+ W +PE F+PERF+D S Y + +PF
Sbjct: 386 KYWRDPEVFHPERFLDSS-GYFAKKEALVPF 415
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 153/394 (38%), Gaps = 58/394 (14%)
Query: 14 GNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESLKTHDIQFCSR-- 71
G +H + P LL L++ GP L LG+ ++V++S +E++ + F R
Sbjct: 36 GFLHLLQPNLPIHLL-SLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQ 94
Query: 72 ---------------------LAKI-RKLCVSHLFNPSRAQSFRPIREDEVSRMIEYISK 109
L K +KL S L +R+ S P + E +
Sbjct: 95 IPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRS-SMEPWVDQLTQEFCERMRV 153
Query: 110 SAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTEIQASPVGFFVT 169
A + V + L +IIC + FG + A + L + + +
Sbjct: 154 QAGAP-VTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWS----IQIL 208
Query: 170 DYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHKDPNITKAELQQEDIVDVLLQ-- 227
D PF+ + + RL+ + D ++ HK+ + Q D+ D +LQ
Sbjct: 209 DMVPFLRFFPN--PGLWRLKQAIENRDHMVEKQLRRHKESMVAG---QWRDMTDYMLQGV 263
Query: 228 ----VQKDHGFKVDLTLDHIYKHTHICAI-CFANG-----STVVWAMTYLMKHPRAMKKV 277
V++ G ++ H H+ + F G ST+ WA+ +L+ HP +++
Sbjct: 264 GRQRVEEGPGQLLE-------GHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRL 316
Query: 278 QEEIRSLIGCKGFVDEV---DLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYE 334
QEE+ +G V D + L A + LRL+ +PL +P I GY+
Sbjct: 317 QEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYD 376
Query: 335 IRAKTLVYVKAWAIRRDPEAWENPEEFNPERFID 368
I +V D WE P EF P+RF++
Sbjct: 377 IPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLE 410
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 156/406 (38%), Gaps = 61/406 (15%)
Query: 20 DFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESLKTHDIQFCSR-------- 71
DF +L + +G SL L P++V++ +E+L TH R
Sbjct: 28 DFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQI 87
Query: 72 -----------LAKI-------RKLCVSHLFNPSRAQSF--RPIREDEVSRMIEYISKSA 111
LA+ R+ VS L N + + + E+ + + S
Sbjct: 88 LGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSG 147
Query: 112 ASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTEIQAS---PVGFF- 167
+ N G++ SN+I + G+R EY+ RFL Q GF
Sbjct: 148 RPFRPN--GLLDKAVSNVIASLTCGRRF--EYD----DPRFLRLLDLAQEGLKEESGFLR 199
Query: 168 -VTDYFPFMGWIDKLRGMMRRLEIYFQKA-DTFYQELNDEHK---DPNITKAELQQEDIV 222
V + P + I L G + R FQKA T EL EH+ DP +L +
Sbjct: 200 EVLNAVPVLLHIPALAGKVLR----FQKAFLTQLDELLTEHRMTWDPAQPPRDLTEA--- 252
Query: 223 DVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANG-----STVVWAMTYLMKHPRAMKKV 277
L +++K G D + + A F+ G +T+ W + ++ HP ++V
Sbjct: 253 -FLAEMEKAKGNPESSFNDENLRI--VVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRV 309
Query: 278 QEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRA 337
Q+EI +IG + D + Y AV+ R +PL V + G+ I
Sbjct: 310 QQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPK 369
Query: 338 KTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
T + ++ +D WE P F+PE F+D + + F+PF
Sbjct: 370 GTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPE-AFLPF 414
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 162/393 (41%), Gaps = 43/393 (10%)
Query: 5 PRPQGLPFIGNVHQFDFSKPQVLL-WELSKIYGPFISLHLGVVPIIVVSSAEMAKESL-K 62
P P LPF+GN+ + K + E K YG + G P++ ++ +M K L K
Sbjct: 19 PGPTPLPFLGNI--LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 76
Query: 63 THDIQFCSR--------------------LAKIRKLCVSHLFNPSRAQSFRPIREDEVSR 102
F +R ++R L +S F + + PI
Sbjct: 77 ECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSL-LSPTFTSGKLKEMVPIIAQYGDV 135
Query: 103 MIEYISKSAAS-KQVNLSGIMMSLASNIICRIGFG---KRHGNEYEAISGRSRFLTFFTE 158
++ + + A + K V L + + + ++I FG N + ++ L F
Sbjct: 136 LVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDF 195
Query: 159 IQASPVGFFVT-DYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHKDPNITKAELQ 217
+ FF++ FPF+ I ++ + ++ ++ F ++ K+ + +
Sbjct: 196 LDP----FFLSITVFPFLIPILEVLNIC----VFPREVTNFLRKSVKRMKESRLEDTQKH 247
Query: 218 QEDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGSTVVWAMTYLM----KHPRA 273
+ D + +++ Q + L + FA T ++++M HP
Sbjct: 248 RVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDV 307
Query: 274 MKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGY 333
+K+QEEI +++ K + +++YL V+ TLRL PI + + + + I+G
Sbjct: 308 QQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL-FPIAMRLERVCKKDVEINGM 366
Query: 334 EIRAKTLVYVKAWAIRRDPEAWENPEEFNPERF 366
I +V + ++A+ RDP+ W PE+F PERF
Sbjct: 367 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 399
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 162/393 (41%), Gaps = 43/393 (10%)
Query: 5 PRPQGLPFIGNVHQFDFSKPQVLL-WELSKIYGPFISLHLGVVPIIVVSSAEMAKESL-K 62
P P LPF+GN+ + K + E K YG + G P++ ++ +M K L K
Sbjct: 17 PGPTPLPFLGNI--LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 74
Query: 63 THDIQFCSR--------------------LAKIRKLCVSHLFNPSRAQSFRPIREDEVSR 102
F +R ++R L +S F + + PI
Sbjct: 75 ECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSL-LSPTFTSGKLKEMVPIIAQYGDV 133
Query: 103 MIEYISKSAAS-KQVNLSGIMMSLASNIICRIGFG---KRHGNEYEAISGRSRFLTFFTE 158
++ + + A + K V L + + + ++I FG N + ++ L F
Sbjct: 134 LVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDF 193
Query: 159 IQASPVGFFVT-DYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHKDPNITKAELQ 217
+ FF++ FPF+ I ++ + ++ ++ F ++ K+ + +
Sbjct: 194 LDP----FFLSITVFPFLIPILEVLNIC----VFPREVTNFLRKSVKRMKESRLEDTQKH 245
Query: 218 QEDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGSTVVWAMTYLM----KHPRA 273
+ D + +++ Q + L + FA T ++++M HP
Sbjct: 246 RVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDV 305
Query: 274 MKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGY 333
+K+QEEI +++ K + +++YL V+ TLRL PI + + + + I+G
Sbjct: 306 QQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL-FPIAMRLERVCKKDVEINGM 364
Query: 334 EIRAKTLVYVKAWAIRRDPEAWENPEEFNPERF 366
I +V + ++A+ RDP+ W PE+F PERF
Sbjct: 365 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 397
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 162/393 (41%), Gaps = 43/393 (10%)
Query: 5 PRPQGLPFIGNVHQFDFSKPQVLL-WELSKIYGPFISLHLGVVPIIVVSSAEMAKESL-K 62
P P LPF+GN+ + K + E K YG + G P++ ++ +M K L K
Sbjct: 18 PGPTPLPFLGNI--LSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 75
Query: 63 THDIQFCSR--------------------LAKIRKLCVSHLFNPSRAQSFRPIREDEVSR 102
F +R ++R L +S F + + PI
Sbjct: 76 ECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSL-LSPTFTSGKLKEMVPIIAQYGDV 134
Query: 103 MIEYISKSAAS-KQVNLSGIMMSLASNIICRIGFG---KRHGNEYEAISGRSRFLTFFTE 158
++ + + A + K V L + + + ++I FG N + ++ L F
Sbjct: 135 LVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDF 194
Query: 159 IQASPVGFFVT-DYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHKDPNITKAELQ 217
+ FF++ FPF+ I ++ + ++ ++ F ++ K+ + +
Sbjct: 195 LDP----FFLSITVFPFLIPILEVLNIC----VFPREVTNFLRKSVKRMKESRLEDTQKH 246
Query: 218 QEDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGSTVVWAMTYLM----KHPRA 273
+ D + +++ Q + L + FA T ++++M HP
Sbjct: 247 RVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDV 306
Query: 274 MKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGY 333
+K+QEEI +++ K + +++YL V+ TLRL PI + + + + I+G
Sbjct: 307 QQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL-FPIAMRLERVCKKDVEINGM 365
Query: 334 EIRAKTLVYVKAWAIRRDPEAWENPEEFNPERF 366
I +V + ++A+ RDP+ W PE+F PERF
Sbjct: 366 FIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 398
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 170/427 (39%), Gaps = 74/427 (17%)
Query: 5 PRPQGLPFI---GNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESL 61
P LPF+ G++H F +L K YGP S+ +G ++V ++AKE L
Sbjct: 17 PLVGSLPFLPRHGHMHNNFF--------KLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVL 68
Query: 62 KTHDIQFCSR--LAKI----------------------RKLCVS--HLFNPSRAQSFRPI 95
F R +A + R+L ++ LF Q I
Sbjct: 69 IKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGD-QKLEKI 127
Query: 96 REDEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGN---EYEAISGRSRF 152
E+S + + ++ + + +++S + +N+I I F + N E I +
Sbjct: 128 ICQEISTLCDMLA-THNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEG 186
Query: 153 LTFFTEIQASPVGFFVTDYFPFMG-----WIDKLRGMMRRLEIYFQKADTFYQELNDEHK 207
+ + + D P++ ++KL+ ++ K Y+E + +
Sbjct: 187 IIDNLSKDS------LVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKE---KFR 237
Query: 208 DPNITKAELQQEDIVDVLLQVQ--KDHGFKVDLTLDHIYKHTHICAIC---FANG----- 257
+IT +++D L+Q + D+G + HI F G
Sbjct: 238 SDSIT-------NMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTT 290
Query: 258 STVVWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIP 317
S V W + +L+ +P+ KK+ EEI +G D + L+A ++ LRL+ P
Sbjct: 291 SVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAP 350
Query: 318 LLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFID-CSIDYKEQ 376
+L+P + I + + T V + WA+ + + W P++F PERF++
Sbjct: 351 MLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISP 410
Query: 377 NLEFIPF 383
++ ++PF
Sbjct: 411 SVSYLPF 417
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 155/406 (38%), Gaps = 61/406 (15%)
Query: 20 DFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKESLKTHDIQFCSR-------- 71
DF +L + +G SL L P++V++ +E+L TH R
Sbjct: 28 DFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQI 87
Query: 72 -----------LAKI-------RKLCVSHLFNPSRAQSF--RPIREDEVSRMIEYISKSA 111
LA+ R+ VS L N + + + E+ + + S
Sbjct: 88 LGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSG 147
Query: 112 ASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTEIQAS---PVGFF- 167
+ N G++ SN+I + G+R EY+ RFL Q GF
Sbjct: 148 RPFRPN--GLLDKAVSNVIASLTCGRRF--EYDD----PRFLRLLDLAQEGLKEESGFLR 199
Query: 168 -VTDYFPFMGWIDKLRGMMRRLEIYFQKA-DTFYQELNDEHK---DPNITKAELQQEDIV 222
V + P I L G + R FQKA T EL EH+ DP +L +
Sbjct: 200 EVLNAVPVDRHIPALAGKVLR----FQKAFLTQLDELLTEHRMTWDPAQPPRDLTEA--- 252
Query: 223 DVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANG-----STVVWAMTYLMKHPRAMKKV 277
L +++K G D + + A F+ G +T+ W + ++ HP ++V
Sbjct: 253 -FLAEMEKAKGNPESSFNDENLRI--VVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRV 309
Query: 278 QEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRA 337
Q+EI +IG + D + Y AV+ R +PL + + G+ I
Sbjct: 310 QQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPK 369
Query: 338 KTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
T + ++ +D WE P F+PE F+D + + F+PF
Sbjct: 370 GTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPE-AFLPF 414
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 82/155 (52%), Gaps = 10/155 (6%)
Query: 217 QQEDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFAN----GSTVVWAMTYLMKHPR 272
+ +D++ LL+ + D+G + H + AI ST++W + L HP
Sbjct: 240 KPDDLLTALLEAKDDNGDPIG----EQEIHDQVVAILTPGSETIASTIMWLLQALADHPE 295
Query: 273 AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDG 332
++++E+ ++ G + E D++++++ V+ +RL+ + +L + + E L G
Sbjct: 296 HADRIRDEVEAVTGGRPVAFE-DVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESEL-GG 353
Query: 333 YEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFI 367
Y I A + +AI+RDP+++++ EF+P+R++
Sbjct: 354 YRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWL 388
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 222 VDVLLQVQK-DHGFKVDLTL-DHIYKHTHICAICFANGSTVVWAMTYLMKHPRAMKKVQE 279
D+L Q+ K + G + D L D+ T A + + + + + L + P + ++Q
Sbjct: 225 ADILTQILKAEEGAQDDEGLLDNFV--TFFIAGHETSANHLAFTVMELSRQPEIVARLQA 282
Query: 280 EIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRAKT 339
E+ +IG K ++D DL ++YL VLK +LRL P + + E+ LIDG + T
Sbjct: 283 EVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPP-AWGTFRLLEEETLIDGVRVPGNT 341
Query: 340 LVYVKAWAIRRDPEAWENPEEFNPERF 366
+ + + R +E+P FNP+RF
Sbjct: 342 PLLFSTYVMGRMDTYFEDPLTFNPDRF 368
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 25/274 (9%)
Query: 97 EDEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFF 156
ED+V RMI + + +++L L GK+ ++ + RF +
Sbjct: 118 EDQVRRMI---ADWGEAGEIDLLDFFAELTIYTSSATLIGKKFRDQLDG-----RFAKLY 169
Query: 157 TEIQ--ASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHKDPNITKA 214
E++ P+ + V Y P I+ R RR E +N +P K+
Sbjct: 170 HELERGTDPLAY-VDPYLP----IESFR---RRDEARNGLVALVADIMNGRIANPPTDKS 221
Query: 215 ELQQEDIVDVLLQVQKDHGFKVDLTLDHIYKH--THICAICFANGSTVVWAMTYLMKHPR 272
+ D++DVL+ V+ + G + D I + + A + T W + LM+H
Sbjct: 222 D---RDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 273 AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDG 332
A V +E+ L G V L+++ L+ VLK TLRL P+ +L+ + + + G
Sbjct: 278 AYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQG 336
Query: 333 YEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERF 366
+ I LV R PE + +P +F P R+
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 29/276 (10%)
Query: 97 EDEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFF 156
ED+V RMI + + +++L L GK+ ++ + RF +
Sbjct: 118 EDQVRRMI---ADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDG-----RFAKLY 169
Query: 157 TEIQ--ASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHKDPNITKA 214
E++ P+ + V Y P I+ R RR E +N +P K+
Sbjct: 170 HELERGTDPLAY-VDPYLP----IESFR---RRDEARNGLVALVADIMNGRIANPPTDKS 221
Query: 215 ELQQEDIVDVLLQVQKDHGFKVDLTLDHIYKH--THICAICFANGSTVVWAMTYLMKHPR 272
+ D++DVL+ V+ + G + D I + + A + T W + LM+H
Sbjct: 222 D---RDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 273 AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLL--VPKEIMEKCLI 330
A V +E+ L G V L+++ L+ VLK TLRL P+ +L V K E +
Sbjct: 278 AYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFE---V 334
Query: 331 DGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERF 366
G+ I LV R PE + +P +F P R+
Sbjct: 335 QGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 25/274 (9%)
Query: 97 EDEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFF 156
ED+V RMI + + +++L L GK+ ++ + RF +
Sbjct: 118 EDQVRRMI---ADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDG-----RFAKLY 169
Query: 157 TEIQ--ASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHKDPNITKA 214
E++ P+ + V Y P I+ R RR E +N +P K+
Sbjct: 170 HELERGTDPLAY-VDPYLP----IESFR---RRDEARNGLVALVADIMNGRIANPPTDKS 221
Query: 215 ELQQEDIVDVLLQVQKDHGFKVDLTLDHIYKH--THICAICFANGSTVVWAMTYLMKHPR 272
+ D++DVL+ V+ + G + D I + + A + T W + LM+H
Sbjct: 222 D---RDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 273 AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDG 332
A V +E+ L G V L+++ L+ VLK TLRL P+ +L+ + + + G
Sbjct: 278 AYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQG 336
Query: 333 YEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERF 366
+ I LV R PE + +P +F P R+
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 25/274 (9%)
Query: 97 EDEVSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFF 156
ED+V RMI + + +++L L GK+ ++ + RF +
Sbjct: 118 EDQVRRMI---ADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDG-----RFAKLY 169
Query: 157 TEIQ--ASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTFYQELNDEHKDPNITKA 214
E++ P+ + V Y P I+ R RR E +N +P K+
Sbjct: 170 HELERGTDPLAY-VDPYLP----IESFR---RRDEARNGLVALVADIMNGRIANPPTDKS 221
Query: 215 ELQQEDIVDVLLQVQKDHGFKVDLTLDHIYKH--THICAICFANGSTVVWAMTYLMKHPR 272
+ D++DVL+ V+ + G + D I + + A + T W + LM+H
Sbjct: 222 D---RDMLDVLIAVKAETG-TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRD 277
Query: 273 AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDG 332
A V +E+ L G V L+++ L+ VLK TLRL P+ +L+ + + + G
Sbjct: 278 AYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQG 336
Query: 333 YEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERF 366
+ I LV R PE + +P +F P R+
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 136/313 (43%), Gaps = 36/313 (11%)
Query: 86 PSRAQSFRP----IREDEVSRMIEYISKSAASK-QVNLSGIMMSLASNIICRIGFGKRHG 140
P ++F P + D VS + I K+ + ++S + A I + FG+R G
Sbjct: 118 PEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQG 177
Query: 141 NEYEAISGRS-RFLTFFTEI--QASPVGFFVTDYFPFM---GWIDKLRGMMRRLEIYFQK 194
E ++ + RF+ ++ + P+ D F W D + ++ F K
Sbjct: 178 MLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAW----DVIFSK 233
Query: 195 ADTFYQELNDEHKDPNITKAELQQEDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICF 254
AD + Q E + D +L ++ D + ++ T + A
Sbjct: 234 ADIYTQNFYWELRQKGSV-----HHDYRGILYRLLGDSKMSFEDIKANV---TEMLAGGV 285
Query: 255 ANGS-TVVWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEVD----LQEVKYLKAVLKGT 309
S T+ W + + ++ KVQ+ +R+ + + D LQ V LKA +K T
Sbjct: 286 DTTSMTLQWHLYEMARN----LKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKET 341
Query: 310 LRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFI-- 367
LRL PI + + + ++ ++ Y I AKTLV V +A+ R+P + +PE F+P R++
Sbjct: 342 LRLH-PISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSK 400
Query: 368 DCSIDYKEQNLEF 380
D +I Y +NL F
Sbjct: 401 DKNITYF-RNLGF 412
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 132/306 (43%), Gaps = 35/306 (11%)
Query: 86 PSRAQSFRP----IREDEVSRMIEYISKSAASK-QVNLSGIMMSLASNIICRIGFGKRHG 140
P ++F P + D VS + I K+ + ++S + A I + FG+R G
Sbjct: 121 PEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQG 180
Query: 141 NEYEAISGRS-RFLTFFTEI--QASPVGFFVTDYFPFM---GWIDKLRGMMRRLEIYFQK 194
E ++ + RF+ ++ + P+ D F W D + ++ F K
Sbjct: 181 MLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAW----DVIFSK 236
Query: 195 ADTFYQELNDEHKDPNITKAELQQEDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICF 254
AD + Q E + D +L ++ D + ++ T + A
Sbjct: 237 ADIYTQNFYWELRQKGSV-----HHDYRGILYRLLGDSKMSFEDIKANV---TEMLAGGV 288
Query: 255 ANGS-TVVWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEVD----LQEVKYLKAVLKGT 309
S T+ W + + ++ KVQ+ +R+ + + D LQ V LKA +K T
Sbjct: 289 DTTSMTLQWHLYEMARN----LKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKET 344
Query: 310 LRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFI-- 367
LRL PI + + + ++ ++ Y I AKTLV V +A+ R+P + +PE F+P R++
Sbjct: 345 LRLH-PISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSK 403
Query: 368 DCSIDY 373
D +I Y
Sbjct: 404 DKNITY 409
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 211 ITKAELQQ----EDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGSTVVWAMT- 265
I KA QQ ED + +LL + D+ L+L + I + FA T+ A++
Sbjct: 210 IIKARQQQPPSEEDALGILLAARDDN--NQPLSLPEL--KDQILLLLFAGHETLTSALSS 265
Query: 266 ---YLMKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPK 322
L +H ++V++E L + E L+++ YL VL+ LRL P+ +
Sbjct: 266 FCLLLGQHSDIRERVRQEQNKLQLSQELTAET-LKKMPYLDQVLQEVLRLIPPVGGGF-R 323
Query: 323 EIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNLEFIP 382
E+++ C G+ LV + DP+ + +PE+F+PERF +P
Sbjct: 324 ELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVP 383
Query: 383 F 383
F
Sbjct: 384 F 384
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 136/320 (42%), Gaps = 44/320 (13%)
Query: 74 KIRKLCVSHLFNPSRAQSF----RPIREDEVSRMIEYISKSAASKQV-NLSGIMMSLASN 128
K R + + + P ++F P+ +D VS + + I + + K V ++ + A
Sbjct: 111 KDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHFAFE 170
Query: 129 IICRIGFGKRHGNEYEAISGRSR------FLTFFTEIQASPVGFFVTDYFPFMGWIDKLR 182
I + FG+R G E ++ ++ + F T + V + F W D +
Sbjct: 171 SITNVMFGERLGMLEETVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRTKTWRDHVA 230
Query: 183 GMMRRLEIYFQKADT----FYQELNDE---HKDPNITKAELQQEDIV--DVLLQVQKDHG 233
+ F KA+ FYQ+L + P I L+ E ++ DV + +
Sbjct: 231 AW----DTIFNKAEKYTEIFYQDLRRKTEFRNYPGILYCLLKSEKMLLEDVKANITEMLA 286
Query: 234 FKVDLTLDHIYKHTHICAICFANGSTVVWAMTYLMKHPRAMKKVQEEI-RSLIGCKGFVD 292
V+ T T+ W + + + + ++EE+ + +G +
Sbjct: 287 GGVNTT-----------------SMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDIS 329
Query: 293 EVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDP 352
++ LQ V LKA +K TLRL PI + + + ++ Y I AKTLV V +A+ RDP
Sbjct: 330 KM-LQMVPLLKASIKETLRLH-PISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDP 387
Query: 353 EAWENPEEFNPERFIDCSID 372
+ +P++F+P R++ D
Sbjct: 388 AFFSSPDKFDPTRWLSKDKD 407
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 239 TLDHIYK-HTHICAICFANGSTV---VWAMTYLMKHPRAMKKVQEEIR----------SL 284
T D + K TH+ + + +T+ W++ ++++P AMK EE++ SL
Sbjct: 252 TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSL 311
Query: 285 IGCKGFVDEVDLQEVKYLKAVLKGTLRLQSP-IPLLVPKEIMEKCLIDG-YEIRAKTLVY 342
G + + +L ++ L +++K +LRL S + + KE L DG Y IR ++
Sbjct: 312 EGNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIA 371
Query: 343 VKAWAIRRDPEAWENPEEFNPERFID 368
+ + DPE + +P F +R++D
Sbjct: 372 LYPQLMHLDPEIYPDPLTFKYDRYLD 397
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 239 TLDHIYK-HTHICAICFANGSTV---VWAMTYLMKHPRAMKKVQEEIR----------SL 284
T D + K TH+ + + +T+ W++ ++++P AMK EE++ SL
Sbjct: 252 TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSL 311
Query: 285 IGCKGFVDEVDLQEVKYLKAVLKGTLRLQSP-IPLLVPKEIMEKCLIDG-YEIRAKTLVY 342
G + + +L ++ L +++K +LRL S + + KE L DG Y IR ++
Sbjct: 312 EGNPICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIA 371
Query: 343 VKAWAIRRDPEAWENPEEFNPERFID 368
+ + DPE + +P F +R++D
Sbjct: 372 LYPQLMHLDPEIYPDPLTFKYDRYLD 397
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 5/152 (3%)
Query: 234 FKVDLTLDHIYKHTHICAICFANGSTVVWAMTY--LMKHPRAMKKVQEEIRSLIGCKGFV 291
K +L+L+ I ++ + + MT L ++P + +++E +
Sbjct: 269 LKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEH 328
Query: 292 DEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRD 351
+ E+ L+A LK TLRL P+ L + + + ++ Y I A TLV V +++ R+
Sbjct: 329 PQKATTELPLLRAALKETLRLY-PVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRN 387
Query: 352 PEAWENPEEFNPERFIDCSIDYKEQNLEFIPF 383
+ PE +NP+R++D I +N +PF
Sbjct: 388 AALFPRPERYNPQRWLD--IRGSGRNFHHVPF 417
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 309 TLRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
TLR + P+ L +P+++ + ++ G EI+ T+V+ A RDPEA+E P+ FN R
Sbjct: 309 TLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHR 364
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 251 AICFANGSTVVWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTL 310
A ++++W + L ++P+A +++ +E++S++ DL+ + YLKA LK ++
Sbjct: 294 AAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESM 353
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFI 367
RL +P + + + ++ Y + T++ + + + +E+ +F PER++
Sbjct: 354 RLTPSVPFTT-RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWL 409
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 257 GSTVVWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPI 316
G W M YL+ HP A++ V+EEI+ G K E + +VL TLRL +
Sbjct: 270 GPAAFWVMGYLLTHPEALRAVREEIQ---GGKHLRLEERQKNTPVFDSVLWETLRLTAAA 326
Query: 317 PLLVPKEIMEK---CLIDGYEI---RAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDC 369
L+ +++ + CL +G E R L + + DP+ + PE F +RF++
Sbjct: 327 --LITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNA 383
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 258 STVVWAMTYLM-KHPRAMKKVQEEIRSLIGCKGF-VDEVDLQEVKYLKAVLKGTLRLQSP 315
S ++ M +L+ KHP + + +EI+++IG + +D D+Q++K ++ + ++R Q P
Sbjct: 312 SVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKID--DIQKLKVMENFIYESMRYQ-P 368
Query: 316 IPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERF 366
+ LV ++ +E +IDGY ++ T + + + R E + P EF E F
Sbjct: 369 VVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFTLENF 418
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 213 KAELQQEDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGST----VVWAMTYLM 268
KA +Q D D+L Q+ + LD I A T + +A+ +L+
Sbjct: 224 KASGEQSD--DLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLV 281
Query: 269 KHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPIPLLVPKEI 324
K+P ++KV EE + VD V ++++KY+ VL LRL P
Sbjct: 282 KNPHVLQKVAEE-----ATRVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK 336
Query: 325 MEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
+ L Y + V V + RD W ++ EEF PERF + S
Sbjct: 337 EDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 73/401 (18%), Positives = 163/401 (40%), Gaps = 64/401 (15%)
Query: 2 KIPPRPQGL-PFIGNVHQFDFSKPQVLLWELSKIYGPFISLHLGVVPIIVVSSAEMAKES 60
K+PP G PF+G++ QF P + + K YG ++++ I VV +
Sbjct: 3 KLPPVVHGTTPFVGHIIQFG-KDPLGFMLKAKKKYGGIFTMNICGNRITVVGDVHQHSKF 61
Query: 61 LKTHD-------------------IQFCSRLAKIRKLC--VSHLFNPSRAQSFRPIREDE 99
+ + + + ++R+ ++ ++ Q+F P + E
Sbjct: 62 FTPRNEILSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKFQNFAPSIQHE 121
Query: 100 VSRMIEYISKSAASKQVNLSGIMMSLASNIICRIGFGKRHGNEYEAISGRSRFLTFFTEI 159
V + ++ + + ++N+ ++ N C+ FG+ +A +F ++
Sbjct: 122 VRKFMK-ANWNKDEGEINILDDCSAMIINTACQCLFGEDLRKRLDA----RQFAQLLAKM 176
Query: 160 QASPVGFFVTDYFPFMGWIDKL------RGMMRRLEIYFQKADTFY-QELNDEHKDPNIT 212
++ + V F+ WI KL R R E+ ++ +E + KD N +
Sbjct: 177 ESCLIPAAV-----FLPWILKLPLPQSYRCRDARAELQDILSEIIIAREKEEAQKDTNTS 231
Query: 213 KAELQQEDIVDVLLQVQKDHGFKVD------LTLDHIYKHTHICAICFANGSTVVWAMTY 266
D++ LL G ++ + + ++ H I T W++ +
Sbjct: 232 -------DLLAGLLGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTI------TTTWSLLH 278
Query: 267 LM--KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEI 324
LM ++ R + K+ +EI + D V ++E+ + + + ++R P+ +L+ +++
Sbjct: 279 LMDPRNKRHLAKLHQEIDEFPAQLNY-DNV-MEEMPFAEQCARESIRRDPPLVMLM-RKV 335
Query: 325 MEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
++ + Y + ++ +D EA+ NP E+NPER
Sbjct: 336 LKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER 376
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A A +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLL 274
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 275 SFALYFLVKNPHELQKAAEE-----AARVLVDPVPSHKQVKQLKYVGMVLNEALRLWPTA 329
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPS 384
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHELQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTG 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A A +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLL 274
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 275 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTG 329
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 217 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 276
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL +
Sbjct: 277 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTV 331
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 332 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 386
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 99/250 (39%), Gaps = 23/250 (9%)
Query: 139 HGNEYEAISGRSRFLTFFTEIQASPVGFFVTDYFPFMGWIDKLRGMMRRLEIYFQKADTF 198
HG E RS+ ++ A G F + GW+ L RR + + D F
Sbjct: 163 HGKEI-----RSQLNEKVAQLYADLDGGFSHAAWLLPGWL-PLPSFRRRDRAHREIKDIF 216
Query: 199 YQELNDEHKDPNITKAELQQEDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFA--- 255
Y+ + Q ++ +D +LQ D +K L + + A
Sbjct: 217 YKAIQKRR----------QSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQH 266
Query: 256 -NGSTVVWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEVD-LQEVKYLKAVLKGTLRLQ 313
+ +T W +L + KK E +++ G D L+++ L +K TLRL+
Sbjct: 267 TSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLR 326
Query: 314 SPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDY 373
PI +++ + + GY I V V +R ++W +FNP+R++ +
Sbjct: 327 PPIMIMM-RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPAS 385
Query: 374 KEQNLEFIPF 383
E+ ++PF
Sbjct: 386 GEK-FAYVPF 394
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 275 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 329
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A + +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLL 274
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 275 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 329
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A + +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A + +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 33/177 (18%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 217 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 276
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRL--QS 314
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL S
Sbjct: 277 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTS 331
Query: 315 PIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P L KE + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 332 PAFSLYAKE--DTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 386
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 249 ICAICFANGSTVVWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKA 304
IC +G + +A+ +L+K+P ++K EE + VD V ++++KY+
Sbjct: 263 ICGHETTSG-LLSFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGM 316
Query: 305 VLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNP 363
VL LRL P + L Y + + V + RD W ++ EEF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 364 ERFIDCS 370
ERF + S
Sbjct: 377 ERFENPS 383
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 275 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 329
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 217 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 276
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 277 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 331
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 332 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 386
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 275 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 329
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 246 HTHICAICFAN-GSTVVWAMTYLMKHPRAMKKVQ----EEIRSLIGCKGF-VDEVDLQEV 299
H + A CF G + + + RA +V EEIRS+I G + ++++
Sbjct: 285 HNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKM 344
Query: 300 KYLKAVLKGTLRLQSPIPL---LVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWE 356
+ K+V+ LR + P+ K+++ + ++++A ++Y RDP+ ++
Sbjct: 345 ELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFD 404
Query: 357 NPEEFNPERFI 367
+EF PERF+
Sbjct: 405 RADEFVPERFV 415
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 246 HTHICAICFAN-GSTVVWAMTYLMKHPRAMKKVQ----EEIRSLIGCKGF-VDEVDLQEV 299
H + A CF G + + + RA +V EEIRS+I G + ++++
Sbjct: 285 HNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKM 344
Query: 300 KYLKAVLKGTLRLQSPIPL---LVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWE 356
+ K+V+ LR + P+ K+++ + ++++A ++Y RDP+ ++
Sbjct: 345 ELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFD 404
Query: 357 NPEEFNPERFI 367
+EF PERF+
Sbjct: 405 RADEFVPERFV 415
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIY----------------KHTHICAICFANGST---V 260
D+VD ++ +K G + D L H+ ++ I + + +T +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 214 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLL 273
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 274 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 328
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 329 PAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 247 THICAICFANGSTVVWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYL 302
T + A + +A+ +L+K+P ++K EE + VD V ++++KY+
Sbjct: 261 TFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYV 315
Query: 303 KAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEF 361
VL LR+ P + L Y + + V + RD W ++ EEF
Sbjct: 316 GMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEF 375
Query: 362 NPERFIDCS 370
PERF + S
Sbjct: 376 RPERFENPS 384
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 262 WAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPIP 317
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL P
Sbjct: 275 FALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 318 LLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
+ L Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 262 WAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPIP 317
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL P
Sbjct: 275 FALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 318 LLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
+ L Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 262 WAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPIP 317
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL P
Sbjct: 275 FALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 318 LLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
+ L Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 262 WAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPIP 317
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL P
Sbjct: 275 FALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAP 329
Query: 318 LLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
+ L Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 AFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 383
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 215 DLVDKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLL 274
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+A+ +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 275 SFALYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 329
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 330 PPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS 384
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 29/175 (16%)
Query: 220 DIVDVLLQVQKDHGFKVDLTLDHIYKH-------------------THICAICFANGSTV 260
D+VD ++ +K G + D L H+ T + A +
Sbjct: 220 DLVDKIIADRKASGEQSDDLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLL 279
Query: 261 VWAMTYLMKHPRAMKKVQEEIRSLIGCKGFVDEV----DLQEVKYLKAVLKGTLRLQSPI 316
+ + +L+K+P ++K EE + VD V ++++KY+ VL LRL
Sbjct: 280 SFTLYFLVKNPHVLQKAAEE-----AARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTA 334
Query: 317 PLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAW-ENPEEFNPERFIDCS 370
P + L Y + + V + RD W ++ EEF PERF + S
Sbjct: 335 PAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPS 389
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 259 TVVWAMTYLM-----KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQ 313
T W+M +LM KH A++K EE + + +DE+ E + ++R
Sbjct: 285 TTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE-----RCARESIRRD 339
Query: 314 SPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
P+ L++ +++M + Y + ++ D EA+ P ++PER
Sbjct: 340 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER 390
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 259 TVVWAMTYLM-----KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQ 313
T W+M +LM KH A++K EE + + +DE+ E + ++R
Sbjct: 285 TTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE-----RCARESIRRD 339
Query: 314 SPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
P+ L++ +++M + Y + ++ D EA+ P ++PER
Sbjct: 340 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER 390
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 259 TVVWAMTYLM-----KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQ 313
T W+M +LM KH A++K EE + + +DE+ E + ++R
Sbjct: 273 TTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE-----RCARESIRRD 327
Query: 314 SPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
P+ L++ +++M + Y + ++ D EA+ P ++PER
Sbjct: 328 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER 378
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 259 TVVWAMTYLM-----KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQ 313
T W+M +LM KH A++K EE + + +DE+ E + ++R
Sbjct: 272 TTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE-----RCARESIRRD 326
Query: 314 SPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
P+ L++ +++M + Y + ++ D EA+ P ++PER
Sbjct: 327 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER 377
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 259 TVVWAMTYLM-----KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQ 313
T W+M +LM KH A++K EE + + +DE+ E + ++R
Sbjct: 272 TTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE-----RCARESIRRD 326
Query: 314 SPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
P+ L++ +++M + Y + ++ D EA+ P ++PER
Sbjct: 327 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER 377
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 259 TVVWAMTYLM-----KHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQ 313
T W+M +LM KH A++K EE + + +DE+ E + ++R
Sbjct: 271 TTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAE-----RCARESIRRD 325
Query: 314 SPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
P+ L++ +++M + Y + ++ D EA+ P ++PER
Sbjct: 326 PPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER 376
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 257 GSTVVWAMTYLMKHPRAMKKVQEEIRSL-------IGCKGFVDEVDLQEVKYLKAVLKGT 309
G W + +L+K+P A+ V+ E+ S+ + + + L L +VL +
Sbjct: 267 GPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSES 326
Query: 310 LRLQSPIPLLVPKEIMEKC--LIDGYEI---RAKTLVYVKAWAIRRDPEAWENPEEFNPE 364
LRL + P + + +++ + DG E R L+ + +RDPE + +PE F
Sbjct: 327 LRLTA-APFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYN 385
Query: 365 RFID 368
RF++
Sbjct: 386 RFLN 389
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 257 GSTVVWAMTYLMKHPRAMKKVQEEIRSL-------IGCKGFVDEVDLQEVKYLKAVLKGT 309
G W + +L+K+P A+ V+ E+ S+ + + + L L +VL +
Sbjct: 279 GPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSES 338
Query: 310 LRLQSPIPLLVPKEIMEKC--LIDGYEI---RAKTLVYVKAWAIRRDPEAWENPEEFNPE 364
LRL + P + + +++ + DG E R L+ + +RDPE + +PE F
Sbjct: 339 LRLTA-APFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYN 397
Query: 365 RFID 368
RF++
Sbjct: 398 RFLN 401
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 334 EIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDYKEQNL-EFIP 382
E + T V + + DP W++P+EF PERF + +E+NL + IP
Sbjct: 307 EFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAE-----REENLFDMIP 351
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 246 HTHICAICFA--NGSTVVWAMTYL---MKHPRAMKKVQEEIRSLIGC--KGFVDEVDLQE 298
H + A+CF G +++ T + ++ EEIR I G V +++
Sbjct: 267 HNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQ 326
Query: 299 VKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLID---GYEIRAKTLVYVKAWAIRRDPEAW 355
+ K+V+ +LR++ P+P K + +E++ +++ +DP+ +
Sbjct: 327 MPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVF 386
Query: 356 ENPEEFNPERFI 367
+ PEE+ P+RF+
Sbjct: 387 DRPEEYVPDRFV 398
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 259 TVVWAMTYLMKHPRAMK---KVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSP 315
T W+M +LM HP+ K K+ +EI + + +D E+ + + ++ ++R P
Sbjct: 285 TTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDNVMD--EMPFAERCVRESIRRDPP 341
Query: 316 IPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
+ L+V + + + + Y + ++ D EA+ NP ++PER
Sbjct: 342 L-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER 390
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 259 TVVWAMTYLMKHPRAMK---KVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSP 315
T W+M +LM HP+ K K+ +EI + + +D E+ + + ++ ++R P
Sbjct: 270 TTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDNVMD--EMPFAERCVRESIRRDPP 326
Query: 316 IPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
+ L+V + + + + Y + ++ D EA+ NP ++PER
Sbjct: 327 L-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER 375
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 259 TVVWAMTYLMKHPRAMK---KVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSP 315
T W+M +LM HP+ K K+ +EI + + +D E+ + + ++ ++R P
Sbjct: 276 TTSWSMLHLM-HPKNKKWLDKLHKEIDEFPAQLNYDNVMD--EMPFAERCVRESIRRDPP 332
Query: 316 IPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
+ L+V + + + + Y + ++ D EA+ NP ++PER
Sbjct: 333 L-LMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER 381
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 325 MEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDY 373
+E I G IRA VYV A RDPE + +P+ + ER + + +
Sbjct: 298 LEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVSF 346
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 325 MEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDY 373
+E I G IRA VYV A RDPE + +P+ + ER + + +
Sbjct: 298 LEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVSF 346
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 325 MEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDY 373
+E I G IRA VYV A RDPE + +P+ + ER + + +
Sbjct: 298 LEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVSF 346
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 325 MEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDY 373
+E I G IRA VYV A RDPE + +P+ + ER + + +
Sbjct: 298 LEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVSF 346
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 325 MEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDY 373
+E I G IRA VYV A RDPE + +P+ + ER + + +
Sbjct: 298 LEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVSF 346
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 325 MEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDY 373
+E I G IRA VYV A RDPE + +P+ + ER + + +
Sbjct: 298 LEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVSF 346
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 325 MEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPERFIDCSIDY 373
+E I G IRA VYV A RDPE + +P+ + ER + + +
Sbjct: 298 LEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVSF 346
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 280 RYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 281 RYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 280 RYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 281 RYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 280 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 281 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 280 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 280 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 281 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 335
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 280 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 282 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 336
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 311 RLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
R + L + + E +I +RA + + RD E +ENP+EFN R
Sbjct: 280 RYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNR 334
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 297 QEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWE 356
++ + A+++ LR + P P + + + + G I A +V + RD +A +
Sbjct: 289 EDPGRIPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHD 347
Query: 357 NPEEFNPER 365
+P+ F+P R
Sbjct: 348 DPDRFDPSR 356
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 302 LKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEF 361
+ A+++ LR + P P + + + + G I A +V + RD +A ++P+ F
Sbjct: 274 IPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRF 332
Query: 362 NPER 365
+P R
Sbjct: 333 DPSR 336
>pdb|3NE8|A Chain A, The Crystal Structure Of A Domain From
N-Acetylmuramoyl-L-Alanine Amidase Of Bartonella
Henselae Str. Houston-1
Length = 234
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 188 LEIYFQKADTFYQELNDEHKDPNITKAELQQEDIVDVLLQVQKDHGFKV-DLTLDHIYKH 246
++++ + T Y ++DE D I K+ + E+ VD+L + K+ ++ D+ LD +
Sbjct: 86 IDVHSLRGATVYT-ISDEASDA-IAKSLAESENKVDLLDGLPKEESLELTDILLDLTRRE 143
Query: 247 THICAICFANG--STVVWAMTYLMKHP 271
TH +I FAN S + + L+ +P
Sbjct: 144 THAFSINFANNVVSNLSKSHINLINNP 170
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 23/101 (22%)
Query: 267 LMKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLL--VPKEI 324
L++HP + K++E LIG ++ LR +SP + V E
Sbjct: 250 LLQHPEQLLKLREN-PDLIGT-----------------AVEECLRYESPTQMTARVASED 291
Query: 325 MEKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
++ C G IR VY+ A RDP + NP+ F+ R
Sbjct: 292 IDIC---GVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITR 329
>pdb|3GPY|A Chain A, Sequence-Matched Mutm Lesion Recognition Complex 3 (Lrc3)
pdb|3GQ4|A Chain A, Sequence-matched Mutm Lesion Recognition Complex 5 (lrc5)
Length = 273
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|3SAR|A Chain A, Mutm Slanted Complex 1
pdb|3SAU|A Chain A, Mutm Interrogation Complex 6
pdb|3SAV|A Chain A, Mutm Slanted Complex 8
Length = 273
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|2F5Q|A Chain A, Catalytically Inactive (E3q) Mutm Crosslinked To Oxog:c
Containing Dna Cc2
pdb|2F5S|A Chain A, Catalytically Inactive (e3q) Mutm Crosslinked To Oxog:c
Containing Dna Cc1
Length = 274
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 33 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 92
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 93 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 141
>pdb|1R2Y|A Chain A, Mutm (Fpg) Bound To 8-Oxoguanine (Oxog) Containing Dna
pdb|1R2Z|A Chain A, Mutm (Fpg) Bound To 5,6-Dihydrouracil (Dhu) Containing Dna
Length = 274
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 33 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 92
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 93 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 141
>pdb|3JR4|A Chain A, Mutm Interrogating An Extrahelical G
pdb|3JR5|A Chain A, Mutm Lesion Recognition Control Complex With N174c
Crosslinking Site
Length = 273
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|2F5N|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling A:t Base Pair
Ic1
pdb|2F5O|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling G:c Base Pair
Ic3
pdb|2F5P|A Chain A, Mutm Crosslinked To Undamaged Dna Sampling A:t Base Pair
Ic2
Length = 274
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 33 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 92
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 93 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 141
>pdb|3SAS|A Chain A, Mutm Slanted Complex 4 With R112a Mutation
pdb|3SAT|A Chain A, Mutm Slanted Complex 6 With R112a Mutation
pdb|3SAW|A Chain A, Mutm Slanted Complex 8 With R112a Mutation
Length = 273
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVAKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|3U6C|A Chain A, Mutm Set 1 Apgo
pdb|3U6D|A Chain A, Mutm Set 1 Gpgo
pdb|3U6E|A Chain A, Mutm Set 1 Tpgo
pdb|3U6L|A Chain A, Mutm Set 2 Cpgo
pdb|3U6M|A Chain A, Structural Effects Of Sequence Context On Lesion
Recognition By Mutm
pdb|3U6O|A Chain A, Mutm Set 1 Apg
pdb|3U6P|A Chain A, Mutm Set 1 Gpg
pdb|3U6Q|A Chain A, Mutm Set 2 Apgo
pdb|3U6S|A Chain A, Mutm Set 1 Tpg
Length = 273
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|1L1T|A Chain A, Mutm (Fpg) Bound To Abasic-Site Containing Dna
pdb|1L1Z|A Chain A, Mutm (Fpg) Covalent-Dna Intermediate
pdb|1L2B|A Chain A, Mutm (Fpg) Dna End-Product Structure
pdb|1L2C|A Chain A, Mutm (Fpg)-Dna Estranged Thymine Mismatch Recognition
Complex
pdb|1L2D|A Chain A, Mutm (fpg)-dna Estranged Guanine Mismatch Recognition
Complex
Length = 274
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 33 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 92
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 93 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 141
>pdb|3GPP|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog)
Lesion In Ec3- T224p Complex
pdb|3GQ5|A Chain A, Sequence-Matched Mutm Interrogation Complex 5 (Ic5)
Length = 273
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 351 DPEAWENPEEFNPERFIDCSIDYKEQNLEFIP 382
D W +P+EF PERF + E + FIP
Sbjct: 314 DAATWADPQEFRPERF----RAWDEDSFNFIP 341
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 22/149 (14%)
Query: 219 EDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGST--VVWAMTYLMKHPRAMKK 276
ED++ L++ + G + LT + + HI + + + M L+ HP +
Sbjct: 231 EDLLSALVRTSDEDGSR--LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAA 288
Query: 277 VQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIR 336
++ ++ L G V+E+ LR + P+ + +E +DG I
Sbjct: 289 LRADMTLL---DGAVEEM---------------LRYEGPVESATYRFPVEPVDLDGTVIP 330
Query: 337 AKTLVYVKAWAIRRDPEAWENPEEFNPER 365
A V V R PE + +P F+ R
Sbjct: 331 AGDTVLVVLADAHRTPERFPDPHRFDIRR 359
>pdb|3GP1|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog)
Lesion In Ec3- V222p Complex
pdb|3SBJ|A Chain A, Mutm Slanted Complex 7
Length = 273
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 351 DPEAWENPEEFNPERFIDCSIDYKEQNLEFIP 382
D W +P+EF PERF + E + FIP
Sbjct: 314 DAATWADPQEFRPERF----RAWDEDSFNFIP 341
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 29/160 (18%)
Query: 211 ITKAELQQED-IVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGSTVVWAMTY--- 266
+ + + + ED ++D L+ Q + G LDH + A T V A+
Sbjct: 203 VGRKQAEPEDGLLDELIARQLEEG-----DLDHDEVVMIALVLLVAGHETTVNAIALGAL 257
Query: 267 -LMKHPRAMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIM 325
L++HP E+I L+ G V V ++E+ +V +R+ KE +
Sbjct: 258 TLIQHP-------EQIDVLLRDPGAVSGV-VEELLRFTSVSDHIVRMA--------KEDI 301
Query: 326 EKCLIDGYEIRAKTLVYVKAWAIRRDPEAWENPEEFNPER 365
E + G I+A V V + RD +A+ENP+ F+ R
Sbjct: 302 E---VGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR 338
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 22/149 (14%)
Query: 219 EDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGST--VVWAMTYLMKHPRAMKK 276
ED++ L++ + G + LT + + HI + + + M L+ HP +
Sbjct: 231 EDLLSALVRTSDEDGSR--LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAA 288
Query: 277 VQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIR 336
++ ++ L G V+E+ LR + P+ + +E +DG I
Sbjct: 289 LRADMTLL---DGAVEEM---------------LRYEGPVESATYRFPVEPVDLDGTVIP 330
Query: 337 AKTLVYVKAWAIRRDPEAWENPEEFNPER 365
A V V R PE + +P F+ R
Sbjct: 331 AGDTVLVVLADAHRTPERFPDPHRFDIRR 359
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 22/149 (14%)
Query: 219 EDIVDVLLQVQKDHGFKVDLTLDHIYKHTHICAICFANGST--VVWAMTYLMKHPRAMKK 276
ED++ L++ + G + LT + + HI + + + M L+ HP +
Sbjct: 231 EDLLSALVRTSDEDGSR--LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAA 288
Query: 277 VQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVPKEIMEKCLIDGYEIR 336
++ ++ L G V+E+ LR + P+ + +E +DG I
Sbjct: 289 LRADMTLLDGA---VEEM---------------LRYEGPVESATYRFPVEPVDLDGTVIP 330
Query: 337 AKTLVYVKAWAIRRDPEAWENPEEFNPER 365
A V V R PE + +P F+ R
Sbjct: 331 AGDTVLVVLADAHRTPERFPDPHRFDIRR 359
>pdb|4G4R|A Chain A, Mutm Containing F114a Mutation Bound To Oxog-containing
Dna
Length = 273
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVRKAGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 351 DPEAWENPEEFNPERFIDCSIDYKEQNLEFIP 382
D W +P+EF PERF + E + FIP
Sbjct: 322 DAATWADPQEFRPERF----RAWDEDSFNFIP 349
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 351 DPEAWENPEEFNPERFIDCSIDYKEQNLEFIP 382
D W +P+EF PERF + E + FIP
Sbjct: 314 DAATWADPQEFRPERF----RAWDEDSFNFIP 341
>pdb|4G4Q|A Chain A, Mutm Containing F114a Mutation Bound To Undamaged Dna
Length = 273
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVRKAGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 351 DPEAWENPEEFNPERFIDCSIDYKEQNLEFIP 382
D W +P+EF PERF + E + FIP
Sbjct: 322 DAATWADPQEFRPERF----RAWDEDSFNFIP 349
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 351 DPEAWENPEEFNPERFIDCSIDYKEQNLEFIP 382
D W +P+EF PERF + E + FIP
Sbjct: 322 DAATWADPQEFRPERF----RAWDEDSFNFIP 349
>pdb|3GO8|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog)
Lesion In Ec3- Loop Deletion Complex
Length = 257
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|3GPX|A Chain A, Sequence-Matched Mutm Interrogation Complex 4 (Ic4)
pdb|3GQ3|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog)
Lesion In Ec5- Loop Deletion Complex
Length = 257
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|3GPU|A Chain A, Mutm Encountering An Intrahelical 8-Oxoguanine (Oxog)
Lesion In Ec4- Loop Deletion Complex
Length = 256
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQEVKYLKAVLKGTLRLQSPIPLLVP 321
+++HPR A + + + +R L F+ + ++ ++G + S + L P
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEP 91
Query: 322 KEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
+ C DG E+R + + VY K A RR P A PE +P
Sbjct: 92 HTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|4G4O|A Chain A, Mutm Containing M77a Mutation Bound To Oxog-containing Dna
Length = 273
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQE--VKYLKAVLKGTLRLQSPIPLL 319
+++HPR A + + + +R L F+ + ++ + +L+A +G + S + L
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRA--EGRYAVASALEPL 89
Query: 320 VPKEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
P + C DG E+R + + VY K A RR P A PE +P
Sbjct: 90 EPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|4G4N|A Chain A, Mutm Containing M77a Mutation Bound To Undamaged Dna
Length = 273
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 16/111 (14%)
Query: 267 LMKHPR-----AMKKVQEEIRSLIGCKGFVDEVDLQE--VKYLKAVLKGTLRLQSPIPLL 319
+++HPR A + + + +R L F+ + ++ + +L+A +G + S + L
Sbjct: 32 IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRA--EGRYAVASALEPL 89
Query: 320 VPKEIMEKCLIDGYEIRAKTL-------VYVKAWAIRRDPEAWENPEEFNP 363
P + C DG E+R + + VY K A RR P A PE +P
Sbjct: 90 EPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSP 140
>pdb|2DQB|A Chain A, Crystal Structure Of Dntp Triphosphohydrolase From Thermus
Thermophilus Hb8, Which Is Homologous To Dgtp
Triphosphohydrolase
pdb|2DQB|B Chain B, Crystal Structure Of Dntp Triphosphohydrolase From Thermus
Thermophilus Hb8, Which Is Homologous To Dgtp
Triphosphohydrolase
pdb|2DQB|C Chain C, Crystal Structure Of Dntp Triphosphohydrolase From Thermus
Thermophilus Hb8, Which Is Homologous To Dgtp
Triphosphohydrolase
pdb|2DQB|D Chain D, Crystal Structure Of Dntp Triphosphohydrolase From Thermus
Thermophilus Hb8, Which Is Homologous To Dgtp
Triphosphohydrolase
pdb|2DQB|E Chain E, Crystal Structure Of Dntp Triphosphohydrolase From Thermus
Thermophilus Hb8, Which Is Homologous To Dgtp
Triphosphohydrolase
pdb|2DQB|F Chain F, Crystal Structure Of Dntp Triphosphohydrolase From Thermus
Thermophilus Hb8, Which Is Homologous To Dgtp
Triphosphohydrolase
Length = 376
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 261 VWAMTYLMKHPRAMKKVQEEI-RSLIGCKGFVDEV------DLQEVKYLKAVLKGTLRLQ 313
V + + +HP + + EE ++L K F+ E L+E + +AVL+G
Sbjct: 272 VQSAEAVRRHPSRLAALGEEAEKALKALKAFLXERFYRHPEVLRERRKAEAVLEGLFAAY 331
Query: 314 SPIPLLVPKEIMEKCLIDGYE 334
+ P L+P+E+ K +G E
Sbjct: 332 TRYPELLPREVQAKIPEEGLE 352
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,482,895
Number of Sequences: 62578
Number of extensions: 467832
Number of successful extensions: 1702
Number of sequences better than 100.0: 158
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 1532
Number of HSP's gapped (non-prelim): 193
length of query: 383
length of database: 14,973,337
effective HSP length: 101
effective length of query: 282
effective length of database: 8,652,959
effective search space: 2440134438
effective search space used: 2440134438
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 52 (24.6 bits)