Citrus Sinensis ID: 046024

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-
METIRSFKGYGKVDELEQQTFRRKTRKRVIILIISSIVLVAVIIGTVIGVVVNKNKNDSSSDNTPATQLTPAASLKAVCSVTRYPDSCFSSISSIDASNVTKDPEILFKLSLQVAMNELEKLQNYPSKLKQQTKDPQVIEALKVCETLFDDALDHVNESLSSMQVGSGEKLLSSKKIQDLKTWLSTSITDQDTCLDALQELNASHYENSNILKDIRSAMQNSTEFASNSLAIGSKILGLLGKVDIPVHRRLLSYYSDSGFPNWVGAGDRRLLQEANPKPDSTVAQDGSGDYHTIEAAVAALPKKSPTRFVIYVKKGTYRENVILDKSKWNVMMYGDGKTVTVVSGSLNFVDGTPTFATATVAVAGRGFIAKDMTFINTAGPEKHQAVAFRSGLRPFSILSDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNIMPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTLSRLDDKLTAATYLGRPWKEFSTTVIMQSTIGPFLNALGWKEWVSGVDPPTSIFYAEYQNVGLASNTSGRVKWAGYRPTLTIDEAAKFTVGNFIQGSEWLAEANVQYQESL
ccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHEEEEEECccccccccccccccccccHHHHHHccccccccccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHcccccccEEEEEEEccEEEEEEEEcccccCEEEEECccccEEEEccccccccccccccEEEEEEEccCEEEccEEEEcccccccEEEEEEEccccCECccccEEcccccEEEEccEEEEcccEEEccccEEEEccEEEEcccccccccEEEEccccccccccEEEEEccEEEEcccccccccccccccccccEEEEEcccccccccccccccccccccccccCEEEEEcccccccccccccccccccccccHHHHcccccccccccccccccccccccccc
*****S*************TFRRKTRKRVIILIISSIVLVAVIIGTVIGVVVN*********************LKAVCSVTRYPDSCFSSISSIDASNVTKDPEILFKLSLQVAMNELEKL**************QVIEALKVCETLFDDALDHVNESL****************IQDLKTWLSTSITDQDTCLDALQELNASHYENSNILKDI****QNSTEFASNSLAIGSKILGLLGKVDIPV**********SGFPNWVGAGDRRLLQEANPKPDSTVAQDGSGDYHTIEAAVAALPKKSPTRFVIYVKKGTYRENVILDKSKWNVMMYGDGKTVTVVSGSLNFVDGTPTFATATVAVAGRGFIAKDMTFINTAGPEKHQAVAFRSGLRPFSILSDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNIMPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTLSRLDDKLTAATYLGRPWKEFSTTVIMQSTIGPFLNALGWKEWVSGVDPPTSIFYAEYQNVGLASNTSGRVKWAGYRPTLTIDEAAKFTVGNFIQGSEWLAEANVQYQESL
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METIRSFKGYGKVDELEQQTFRRKTRKRVIILIISSIVLVAVIIGTVIGVVVNKNKNDSSSDNTPATQLTPAASLKAVCSVTRYPDSCFSSISSIDASNVTKDPEILFKLSLQVAMNELEKLQNYPSKLKQQTKDPQVIEALKVCETLFDDALDHVNESLSSMQVGSGEKLLSSKKIQDLKTWLSTSITDQDTCLDALQELNASHYENSNILKDIRSAMQNSTEFASNSLAIGSKILGLLGKVDIPVHRRLLSYYSDSGFPNWVGAGDRRLLQEANPKPDSTVAQDGSGDYHTIEAAVAALPKKSPTRFVIYVKKGTYRENVILDKSKWNVMMYGDGKTVTVVSGSLNFVDGTPTFATATVAVAGRGFIAKDMTFINTAGPEKHQAVAFRSGLRPFSILSDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNIMPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTLSRLDDKLTAATYLGRPWKEFSTTVIMQSTIGPFLNALGWKEWVSGVDPPTSIFYAEYQNVGLASNTSGRVKWAGYRPTLTIDEAAKFTVGNFIQGSEWLAEANVQYQESL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Pectinesterase 1 Acts in the modification of cell walls via demethylesterification of cell wall pectin.probableQ43867
Pectinesterase 3 May have roles in the deposition of pectin in developing tissues and in the wall loosening and cell separation that occurs in cell expansion, fruit ripening and abscission.probableQ43111

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.1.-Carboxylic ester hydrolases.probable
3.1.1.11Pectinesterase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GQ8, chain A
Confidence level:very confident
Coverage over the Query: 276-581
View the alignment between query and template
View the model in PyMOL
Template: 1XG2, chain B
Confidence level:very confident
Coverage over the Query: 72-237
View the alignment between query and template
View the model in PyMOL