Query 046030
Match_columns 331
No_of_seqs 430 out of 2070
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 08:04:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046030.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046030hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13962 PGG: Domain of unknow 99.9 5E-25 1.1E-29 171.7 12.5 109 167-282 1-113 (113)
2 KOG4412 26S proteasome regulat 99.9 1.4E-24 3E-29 175.2 5.0 134 24-161 37-186 (226)
3 KOG4412 26S proteasome regulat 99.9 2.9E-23 6.3E-28 167.6 3.4 130 25-157 3-148 (226)
4 PHA02741 hypothetical protein; 99.8 1E-19 2.3E-24 152.4 9.0 127 17-168 13-153 (169)
5 KOG0195 Integrin-linked kinase 99.8 6.1E-20 1.3E-24 158.4 7.4 130 5-158 7-143 (448)
6 KOG0509 Ankyrin repeat and DHH 99.8 1.4E-19 3E-24 171.3 8.5 118 16-157 69-187 (600)
7 KOG0509 Ankyrin repeat and DHH 99.8 7.2E-18 1.6E-22 159.8 17.3 131 23-158 110-255 (600)
8 PHA02791 ankyrin-like protein; 99.8 1.3E-18 2.8E-23 156.8 10.3 139 19-165 24-178 (284)
9 KOG0512 Fetal globin-inducing 99.8 1.1E-18 2.5E-23 140.1 8.0 118 17-158 89-208 (228)
10 PHA02791 ankyrin-like protein; 99.8 2.2E-18 4.8E-23 155.3 8.6 72 35-115 9-80 (284)
11 PHA02878 ankyrin repeat protei 99.7 3.7E-18 8.1E-23 165.9 9.9 135 17-158 159-310 (477)
12 KOG0510 Ankyrin repeat protein 99.7 1.5E-18 3.4E-23 167.6 5.5 136 16-154 264-416 (929)
13 PHA02874 ankyrin repeat protei 99.7 5.2E-18 1.1E-22 163.0 8.9 135 17-157 116-263 (434)
14 PLN03192 Voltage-dependent pot 99.7 1E-17 2.2E-22 172.5 10.5 139 21-164 521-672 (823)
15 PHA02946 ankyin-like protein; 99.7 1.3E-17 2.9E-22 160.1 10.6 92 16-112 63-156 (446)
16 PHA02859 ankyrin repeat protei 99.7 1.6E-17 3.5E-22 143.9 8.3 136 18-158 44-202 (209)
17 PHA02743 Viral ankyrin protein 99.7 1.2E-17 2.5E-22 139.6 7.1 117 17-158 12-138 (166)
18 PHA03100 ankyrin repeat protei 99.7 2.6E-17 5.6E-22 160.1 9.7 142 18-164 99-267 (480)
19 PHA02736 Viral ankyrin protein 99.7 6.7E-18 1.4E-22 139.3 4.7 123 18-164 10-143 (154)
20 PHA02875 ankyrin repeat protei 99.7 2.7E-17 5.8E-22 157.0 9.0 142 18-163 28-184 (413)
21 PHA02859 ankyrin repeat protei 99.7 2.7E-17 5.8E-22 142.5 8.0 124 23-154 19-164 (209)
22 PHA02874 ankyrin repeat protei 99.7 5.2E-17 1.1E-21 156.1 10.7 146 18-164 28-207 (434)
23 PHA02884 ankyrin repeat protei 99.7 3.5E-17 7.5E-22 147.8 7.8 116 18-157 25-146 (300)
24 PHA02798 ankyrin-like protein; 99.7 3.9E-17 8.5E-22 159.2 8.6 87 17-108 63-157 (489)
25 PHA02878 ankyrin repeat protei 99.7 5.9E-17 1.3E-21 157.5 9.7 93 40-156 149-242 (477)
26 PHA02875 ankyrin repeat protei 99.7 5.3E-17 1.2E-21 155.0 8.9 138 22-163 65-218 (413)
27 KOG0510 Ankyrin repeat protein 99.7 7.5E-16 1.6E-20 149.3 16.0 108 7-115 282-396 (929)
28 KOG0508 Ankyrin repeat protein 99.7 4.1E-17 8.8E-22 149.4 6.0 121 18-163 110-231 (615)
29 PHA03100 ankyrin repeat protei 99.7 9.7E-17 2.1E-21 156.0 8.6 144 16-164 132-300 (480)
30 PHA02716 CPXV016; CPX019; EVM0 99.7 2.1E-16 4.5E-21 157.9 10.1 136 17-157 168-361 (764)
31 PHA02743 Viral ankyrin protein 99.7 1E-16 2.3E-21 133.8 6.7 110 17-150 49-163 (166)
32 PHA03095 ankyrin-like protein; 99.7 2.4E-16 5.3E-21 152.8 8.9 116 17-156 39-160 (471)
33 PHA02989 ankyrin repeat protei 99.6 3.2E-16 6.8E-21 153.1 8.3 137 16-157 99-265 (494)
34 PHA02946 ankyin-like protein; 99.6 6.3E-16 1.4E-20 148.6 10.2 137 17-158 97-252 (446)
35 KOG0514 Ankyrin repeat protein 99.6 3.4E-17 7.3E-22 145.6 1.3 127 14-162 257-422 (452)
36 PHA02716 CPXV016; CPX019; EVM0 99.6 1.7E-16 3.6E-21 158.5 6.4 142 18-164 130-336 (764)
37 KOG0512 Fetal globin-inducing 99.6 2.6E-16 5.6E-21 126.7 6.2 108 28-158 66-173 (228)
38 KOG0502 Integral membrane anky 99.6 1.2E-16 2.7E-21 133.1 4.3 120 15-158 150-269 (296)
39 PLN03192 Voltage-dependent pot 99.6 3.9E-16 8.5E-21 160.8 8.6 119 17-156 550-697 (823)
40 PHA03095 ankyrin-like protein; 99.6 6.2E-16 1.3E-20 150.0 9.0 144 16-164 143-307 (471)
41 PHA02876 ankyrin repeat protei 99.6 1.4E-15 2.9E-20 154.2 10.8 136 18-158 300-452 (682)
42 PF12796 Ank_2: Ankyrin repeat 99.6 4.6E-16 9.9E-21 116.0 5.5 77 29-114 1-77 (89)
43 PHA02876 ankyrin repeat protei 99.6 7.2E-16 1.6E-20 156.2 8.2 136 17-157 333-485 (682)
44 PHA02795 ankyrin-like protein; 99.6 4.8E-16 1.1E-20 146.0 4.8 110 26-158 150-264 (437)
45 PHA02917 ankyrin-like protein; 99.6 2.4E-15 5.1E-20 150.4 9.8 136 18-158 25-239 (661)
46 PHA02989 ankyrin repeat protei 99.6 2.4E-15 5.1E-20 146.9 8.2 77 25-105 69-154 (494)
47 PHA02798 ankyrin-like protein; 99.6 3.6E-15 7.7E-20 145.5 8.7 129 24-157 35-191 (489)
48 PHA02741 hypothetical protein; 99.6 3.3E-15 7.2E-20 125.1 6.9 95 16-115 51-151 (169)
49 KOG4177 Ankyrin [Cell wall/mem 99.6 4.2E-15 9.2E-20 151.7 8.2 116 18-157 533-653 (1143)
50 KOG0508 Ankyrin repeat protein 99.6 2.7E-15 5.8E-20 137.5 5.2 124 20-167 79-203 (615)
51 cd00204 ANK ankyrin repeats; 99.6 1.4E-14 3.1E-19 113.4 8.5 114 21-158 3-116 (126)
52 PHA02736 Viral ankyrin protein 99.5 2.6E-15 5.6E-20 123.8 3.5 91 19-114 49-144 (154)
53 TIGR00870 trp transient-recept 99.5 9.1E-15 2E-19 149.5 6.6 128 22-162 125-272 (743)
54 PHA02730 ankyrin-like protein; 99.5 4E-14 8.7E-19 139.2 10.5 124 18-164 33-172 (672)
55 PHA02884 ankyrin repeat protei 99.5 3.2E-14 7E-19 128.6 9.1 86 22-112 67-153 (300)
56 PHA02730 ankyrin-like protein; 99.5 2.5E-14 5.4E-19 140.7 8.2 123 18-164 372-515 (672)
57 KOG4177 Ankyrin [Cell wall/mem 99.5 1.7E-14 3.6E-19 147.4 6.1 110 24-157 506-615 (1143)
58 KOG0507 CASK-interacting adapt 99.5 1.9E-14 4.2E-19 138.6 2.6 118 17-158 41-158 (854)
59 KOG0505 Myosin phosphatase, re 99.5 8.2E-14 1.8E-18 129.9 6.4 138 19-157 67-273 (527)
60 KOG3676 Ca2+-permeable cation 99.4 4.8E-12 1E-16 123.6 17.7 111 23-157 182-317 (782)
61 PHA02917 ankyrin-like protein; 99.4 4.2E-13 9.1E-18 134.4 10.1 127 7-156 112-275 (661)
62 PF13857 Ank_5: Ankyrin repeat 99.4 1.2E-13 2.5E-18 93.6 4.2 56 44-103 1-56 (56)
63 PF13637 Ank_4: Ankyrin repeat 99.4 3.1E-13 6.8E-18 90.8 6.3 54 25-79 1-54 (54)
64 PHA02795 ankyrin-like protein; 99.4 1.7E-13 3.6E-18 129.0 5.6 81 23-108 186-266 (437)
65 TIGR00870 trp transient-recept 99.4 1.2E-13 2.7E-18 141.2 3.9 138 16-158 43-218 (743)
66 COG0666 Arp FOG: Ankyrin repea 99.4 2E-12 4.4E-17 111.7 9.2 118 18-158 66-190 (235)
67 PHA02792 ankyrin-like protein; 99.4 5E-13 1.1E-17 130.4 5.6 127 19-159 65-226 (631)
68 PHA02792 ankyrin-like protein; 99.4 1.4E-12 2.9E-17 127.3 8.6 109 25-157 339-452 (631)
69 KOG0195 Integrin-linked kinase 99.3 1E-13 2.2E-18 120.2 -0.5 102 33-157 8-109 (448)
70 PTZ00322 6-phosphofructo-2-kin 99.3 1.1E-12 2.5E-17 131.8 6.8 111 28-155 85-195 (664)
71 KOG4214 Myotrophin and similar 99.3 8E-13 1.7E-17 95.7 3.8 106 27-157 4-109 (117)
72 KOG0505 Myosin phosphatase, re 99.3 8.2E-13 1.8E-17 123.3 5.0 82 28-114 43-124 (527)
73 PF12796 Ank_2: Ankyrin repeat 99.3 4.7E-12 1E-16 94.1 6.8 61 25-86 26-86 (89)
74 KOG4214 Myotrophin and similar 99.3 1.9E-12 4.1E-17 93.8 3.6 93 4-101 8-105 (117)
75 KOG0507 CASK-interacting adapt 99.3 1.7E-12 3.7E-17 125.4 3.5 132 18-165 75-207 (854)
76 KOG0502 Integral membrane anky 99.3 5.2E-12 1.1E-16 105.7 4.7 116 23-164 127-243 (296)
77 PF13857 Ank_5: Ankyrin repeat 99.2 6.1E-12 1.3E-16 85.1 3.9 50 16-66 7-56 (56)
78 PF13637 Ank_4: Ankyrin repeat 99.2 3.1E-12 6.8E-17 85.9 2.2 51 59-113 1-51 (54)
79 KOG0514 Ankyrin repeat protein 99.2 1.1E-11 2.3E-16 110.9 5.9 87 23-114 338-425 (452)
80 COG0666 Arp FOG: Ankyrin repea 99.2 2.6E-11 5.6E-16 104.7 5.8 94 16-113 97-197 (235)
81 KOG0515 p53-interacting protei 99.2 4.4E-11 9.6E-16 111.3 6.4 102 29-155 554-657 (752)
82 cd00204 ANK ankyrin repeats; 99.2 9.8E-11 2.1E-15 91.4 7.4 88 19-111 34-121 (126)
83 KOG1710 MYND Zn-finger and ank 99.1 6.4E-11 1.4E-15 102.9 6.0 95 18-116 38-132 (396)
84 KOG3676 Ca2+-permeable cation 99.1 1.5E-09 3.2E-14 106.5 12.4 88 24-114 239-326 (782)
85 KOG1710 MYND Zn-finger and ank 99.0 8.4E-10 1.8E-14 96.0 5.8 109 25-156 12-120 (396)
86 PTZ00322 6-phosphofructo-2-kin 98.9 1.7E-09 3.8E-14 109.0 8.1 84 17-105 107-197 (664)
87 KOG0515 p53-interacting protei 98.9 2.3E-09 5E-14 100.1 5.9 80 20-103 578-657 (752)
88 KOG0783 Uncharacterized conser 98.7 2.1E-09 4.5E-14 105.0 0.0 84 18-106 45-129 (1267)
89 KOG0818 GTPase-activating prot 98.7 9.1E-08 2E-12 88.9 9.1 94 18-115 120-219 (669)
90 KOG4369 RTK signaling protein 98.7 7E-09 1.5E-13 104.2 1.7 135 23-161 755-906 (2131)
91 KOG0506 Glutaminase (contains 98.6 1E-08 2.2E-13 94.7 1.8 90 21-115 502-592 (622)
92 KOG4369 RTK signaling protein 98.5 1E-08 2.3E-13 102.9 -0.9 147 6-156 765-934 (2131)
93 PF13606 Ank_3: Ankyrin repeat 98.5 1E-07 2.3E-12 55.4 3.4 27 58-84 1-27 (30)
94 KOG0783 Uncharacterized conser 98.5 6E-08 1.3E-12 95.1 3.5 70 42-115 35-105 (1267)
95 KOG0782 Predicted diacylglycer 98.5 7.1E-08 1.5E-12 91.0 3.3 90 20-113 894-984 (1004)
96 PF00023 Ank: Ankyrin repeat H 98.5 2.7E-07 5.9E-12 55.0 4.1 29 58-86 1-29 (33)
97 PF13606 Ank_3: Ankyrin repeat 98.4 3.3E-07 7.1E-12 53.3 3.5 27 24-50 1-27 (30)
98 KOG0818 GTPase-activating prot 98.4 3.4E-07 7.4E-12 85.2 5.4 94 54-169 122-222 (669)
99 PF00023 Ank: Ankyrin repeat H 98.4 3.6E-07 7.8E-12 54.4 3.7 32 24-56 1-32 (33)
100 KOG0782 Predicted diacylglycer 98.4 3.5E-07 7.5E-12 86.4 4.9 107 29-157 870-976 (1004)
101 KOG0522 Ankyrin repeat protein 98.4 4.3E-07 9.3E-12 85.4 5.0 82 27-112 22-104 (560)
102 KOG0522 Ankyrin repeat protein 98.3 1.9E-06 4.2E-11 81.1 6.8 66 15-81 45-110 (560)
103 KOG0705 GTPase-activating prot 98.2 3.2E-06 6.9E-11 80.2 6.0 60 23-83 659-718 (749)
104 KOG0521 Putative GTPase activa 98.1 1.8E-06 3.9E-11 87.5 2.7 87 21-112 652-738 (785)
105 KOG0506 Glutaminase (contains 97.9 6E-06 1.3E-10 76.8 3.2 66 16-81 530-595 (622)
106 KOG0705 GTPase-activating prot 97.9 7.2E-06 1.6E-10 77.9 3.6 84 28-115 627-713 (749)
107 KOG0521 Putative GTPase activa 97.7 3E-05 6.6E-10 78.8 4.0 78 57-157 654-731 (785)
108 KOG2384 Major histocompatibili 97.6 0.0001 2.3E-09 61.0 5.6 68 17-84 4-71 (223)
109 KOG0511 Ankyrin repeat protein 97.6 0.00013 2.9E-09 66.3 6.7 60 26-86 37-96 (516)
110 KOG0520 Uncharacterized conser 97.4 4.9E-05 1.1E-09 77.2 0.5 117 20-157 569-689 (975)
111 KOG0520 Uncharacterized conser 97.3 8.1E-05 1.7E-09 75.7 1.4 99 21-120 604-704 (975)
112 KOG2384 Major histocompatibili 97.1 0.00023 4.9E-09 59.0 1.5 59 52-114 5-64 (223)
113 KOG3609 Receptor-activated Ca2 97.0 0.00046 1E-08 69.0 3.4 92 24-115 24-150 (822)
114 smart00248 ANK ankyrin repeats 96.4 0.005 1.1E-07 33.7 3.5 24 59-82 2-25 (30)
115 smart00248 ANK ankyrin repeats 96.2 0.0074 1.6E-07 32.9 3.5 27 24-50 1-27 (30)
116 KOG2505 Ankyrin repeat protein 95.9 0.0092 2E-07 56.5 4.4 63 38-104 404-471 (591)
117 KOG0511 Ankyrin repeat protein 94.2 0.072 1.6E-06 49.0 4.7 62 48-115 27-88 (516)
118 KOG2505 Ankyrin repeat protein 94.0 0.059 1.3E-06 51.2 4.0 42 25-67 430-471 (591)
119 KOG3609 Receptor-activated Ca2 93.1 0.094 2E-06 53.0 3.7 30 57-86 129-158 (822)
120 PF11929 DUF3447: Domain of un 86.1 1.6 3.4E-05 31.0 4.4 49 26-82 7-55 (76)
121 KOG4591 Uncharacterized conser 82.4 0.79 1.7E-05 38.7 1.7 54 54-107 217-271 (280)
122 PF03158 DUF249: Multigene fam 74.0 5.7 0.00012 33.3 4.3 44 29-79 147-190 (192)
123 PF07344 Amastin: Amastin surf 59.8 60 0.0013 26.4 7.7 44 255-298 60-104 (155)
124 PF12304 BCLP: Beta-casein lik 56.1 43 0.00093 28.0 6.1 29 216-245 39-68 (188)
125 TIGR01569 A_tha_TIGR01569 plan 41.1 2E+02 0.0042 23.4 9.1 30 205-234 35-64 (154)
126 PF12273 RCR: Chitin synthesis 40.0 30 0.00065 27.2 2.9 19 288-306 1-19 (130)
127 KOG3788 Predicted divalent cat 40.0 3.4E+02 0.0074 25.9 11.6 22 178-199 119-140 (441)
128 KOG4591 Uncharacterized conser 37.8 20 0.00043 30.5 1.5 49 23-71 220-272 (280)
129 TIGR00383 corA magnesium Mg(2+ 37.3 97 0.0021 28.2 6.3 28 262-290 260-291 (318)
130 KOG2887 Membrane protein invol 36.9 2E+02 0.0044 23.9 7.2 43 277-319 123-165 (175)
131 PF11023 DUF2614: Protein of u 34.6 1.2E+02 0.0027 23.2 5.2 41 258-305 13-53 (114)
132 PRK02935 hypothetical protein; 33.5 1.6E+02 0.0035 22.3 5.6 35 258-299 14-48 (110)
133 PRK09546 zntB zinc transporter 31.7 1.3E+02 0.0029 27.5 6.2 20 262-281 266-285 (324)
134 PF06128 Shigella_OspC: Shigel 31.6 1E+02 0.0023 26.9 4.9 88 25-115 179-273 (284)
135 TIGR02916 PEP_his_kin putative 30.8 5.8E+02 0.013 26.0 11.3 16 252-267 223-238 (679)
136 PF07062 Clc-like: Clc-like; 29.5 1.8E+02 0.0038 25.2 6.0 65 215-280 136-202 (211)
137 COG4298 Uncharacterized protei 29.1 1.8E+02 0.004 21.0 5.0 50 216-285 15-64 (95)
138 PF10966 DUF2768: Protein of u 28.2 1.1E+02 0.0023 20.6 3.5 19 266-284 4-22 (58)
139 PF05915 DUF872: Eukaryotic pr 27.5 2.8E+02 0.0061 21.4 6.3 21 287-307 75-95 (115)
140 PF15176 LRR19-TM: Leucine-ric 26.3 1.2E+02 0.0027 22.7 3.9 32 288-319 16-49 (102)
141 PF11137 DUF2909: Protein of u 26.2 2.2E+02 0.0047 19.4 6.6 59 215-280 2-60 (63)
142 PF11241 DUF3043: Protein of u 25.6 2.7E+02 0.0058 23.2 6.2 20 257-276 75-94 (170)
143 PF06128 Shigella_OspC: Shigel 25.4 87 0.0019 27.4 3.4 48 37-84 229-279 (284)
144 COG0581 PstA ABC-type phosphat 25.1 2.2E+02 0.0047 26.0 6.1 54 264-317 81-138 (292)
145 PF01544 CorA: CorA-like Mg2+ 24.8 1.1E+02 0.0024 27.1 4.3 21 262-282 236-256 (292)
146 PF10011 DUF2254: Predicted me 24.7 5.9E+02 0.013 23.9 10.1 19 178-196 13-31 (371)
147 PF15339 Afaf: Acrosome format 23.9 1.5E+02 0.0034 24.5 4.4 35 251-285 126-160 (200)
148 PF06570 DUF1129: Protein of u 23.2 4.7E+02 0.01 22.2 9.9 16 141-157 46-61 (206)
149 PF04535 DUF588: Domain of unk 23.2 3.9E+02 0.0084 21.3 8.7 32 203-234 38-69 (149)
150 TIGR00341 conserved hypothetic 22.1 1.7E+02 0.0036 27.1 4.9 29 218-247 269-297 (325)
151 COG4325 Predicted membrane pro 22.1 7E+02 0.015 23.8 10.9 30 172-201 33-62 (464)
152 PRK11085 magnesium/nickel/coba 22.0 2.5E+02 0.0054 25.9 6.0 28 262-290 258-289 (316)
153 COG0598 CorA Mg2+ and Co2+ tra 21.8 2.1E+02 0.0045 26.3 5.5 21 262-282 264-284 (322)
154 PF10661 EssA: WXG100 protein 21.7 1E+02 0.0022 24.9 3.0 22 264-285 121-142 (145)
155 COG2322 Predicted membrane pro 21.1 4.8E+02 0.01 21.6 8.8 21 177-197 14-34 (177)
156 PF04156 IncA: IncA protein; 21.1 1.8E+02 0.004 24.2 4.7 12 219-230 6-17 (191)
157 PF11286 DUF3087: Protein of u 20.6 4.9E+02 0.011 21.5 8.1 23 263-285 21-43 (165)
No 1
>PF13962 PGG: Domain of unknown function
Probab=99.93 E-value=5e-25 Score=171.72 Aligned_cols=109 Identities=36% Similarity=0.604 Sum_probs=94.7
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHhhhcCCCCCCCC---CCcccccCcc-hhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 046030 167 ENWMKRRAESCSIVATLAIAGVFQAAFTLPGGTKDG---KGTPNFHSKI-WFHIFVMSEAIAFSCSCISMLMFLSILITS 242 (331)
Q Consensus 167 ~~~~k~~~~~~~iva~Liatvtfaa~~t~PgG~~~~---~G~p~~~~~~-~f~~F~~~~~~a~~~S~~~~~~~~~~~~~~ 242 (331)
+||+++.++++++||+||||+||+|+++||||++|+ .|+|++.+++ .|++|+++|++||++|+++++++++.+
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~--- 77 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGL--- 77 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 479999999999999999999999999999999875 6999998887 999999999999999999998876322
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Q 046030 243 RYRENDFLKLLPFKLILGLLSLFIALTAMMLSFSSNFFLA 282 (331)
Q Consensus 243 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~af~~~~~~v 282 (331)
.++.+..+..+.++..++++++.+|++||++|+|+|
T Consensus 78 ----~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 78 ----DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 222334455677888999999999999999999975
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=1.4e-24 Score=175.24 Aligned_cols=134 Identities=16% Similarity=0.158 Sum_probs=87.0
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhh-CCchhhhhhhcccCCCcHHHH
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEI-GFSKELIATYVDKSGNNLLHL 102 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~-~~~~~~~in~~d~~G~TpLHl 102 (331)
+|+||||+||+-|+.+++.+|++.-.-.++.+|..||||||+|+..|+.++|+.|+.+ |++ +|..++.|.|+||+
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~ad----vna~tn~G~T~LHy 112 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGAD----VNATTNGGQTCLHY 112 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCC----cceecCCCcceehh
Confidence 6666666666666666666666522222455566666666666666666666666665 444 24466666666666
Q ss_pred HHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhch-HHhhhh
Q 046030 103 AAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELF-TAEHKT 161 (331)
Q Consensus 103 Aa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la-~~~~~~ 161 (331)
|+..|+.++.++| ...++|-+...+..+.++.++ .++.+|.+|+.|.||||.| +++|.+
T Consensus 113 AagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d 186 (226)
T KOG4412|consen 113 AAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPD 186 (226)
T ss_pred hhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCch
Confidence 6666666655443 123455555555566666666 5888999999999999999 666654
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=2.9e-23 Score=167.59 Aligned_cols=130 Identities=18% Similarity=0.216 Sum_probs=101.9
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCccccccc-CCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHH
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDE-EDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLA 103 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~-~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlA 103 (331)
+.++.+.++......-++++++..|...+.+|. +||||||+||..|+.+++.+|++.. + ..+|.+|..|+||||+|
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~-n--v~~ddkDdaGWtPlhia 79 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQP-N--VKPDDKDDAGWTPLHIA 79 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcC-C--CCCCCccccCCchhhhh
Confidence 567889999999999999999999966666655 9999999999999999999999732 2 22477999999999999
Q ss_pred HhhCCCCCCCCCC--------------CcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH
Q 046030 104 AQYSNPKPISKVP--------------GAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 104 a~~g~~~~~~~l~--------------~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 157 (331)
+..|+.++++-|. ...+|.+...+|++..+.++ .|+.++++|+.|+||+|-|..
T Consensus 80 ~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAa 148 (226)
T KOG4412|consen 80 ASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAA 148 (226)
T ss_pred hhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHh
Confidence 9999988775441 13456666666777666665 467777777777777777643
No 4
>PHA02741 hypothetical protein; Provisional
Probab=99.80 E-value=1e-19 Score=152.43 Aligned_cols=127 Identities=20% Similarity=0.259 Sum_probs=103.6
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHh------CCCcccccccCCccHHHHHHHcCC----HHHHHHHHhhCCchh
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRS------YPDLVHELDEEDRSIFHIAVMHRH----AETFKLIYEIGFSKE 86 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~------~~~~~~~~d~~G~t~LH~Aa~~g~----~~iv~~Ll~~~~~~~ 86 (331)
.++.+|.+|.||||+|+..|+.++++.|+.. +.+ ++.+|..|+||||+|+..|+ .+++++|++.|++.
T Consensus 13 ~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~-in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadi- 90 (169)
T PHA02741 13 MIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAA-LNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADI- 90 (169)
T ss_pred HhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhh-hhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCC-
Confidence 4678889999999999999999999998653 244 78899999999999999998 58899999999884
Q ss_pred hhhhhccc-CCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc--CcccccccccCCCCchhchHHh-hhhH
Q 046030 87 LIATYVDK-SGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV--KPSFKEMKNNDGKTPWELFTAE-HKTL 162 (331)
Q Consensus 87 ~~in~~d~-~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~--~~~~~~~~n~~G~Tpl~la~~~-~~~l 162 (331)
|.+|. +|+||||+|+..++.+++++ ++ ++.+++.+|.+|+||+++|... +.++
T Consensus 91 ---n~~~~~~g~TpLh~A~~~~~~~iv~~--------------------Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~i 147 (169)
T PHA02741 91 ---NAQEMLEGDTALHLAAHRRDHDLAEW--------------------LCCQPGIDLHFCNADNKSPFELAIDNEDVAM 147 (169)
T ss_pred ---CCCCcCCCCCHHHHHHHcCCHHHHHH--------------------HHhCCCCCCCcCCCCCCCHHHHHHHCCCHHH
Confidence 55885 89999999999999765433 33 4788999999999999999654 3345
Q ss_pred HHHHHH
Q 046030 163 LEEAEN 168 (331)
Q Consensus 163 ~~~~~~ 168 (331)
++...+
T Consensus 148 v~~L~~ 153 (169)
T PHA02741 148 MQILRE 153 (169)
T ss_pred HHHHHH
Confidence 444333
No 5
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=6.1e-20 Score=158.40 Aligned_cols=130 Identities=20% Similarity=0.281 Sum_probs=111.7
Q ss_pred cccCCceeEEEe-------cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHH
Q 046030 5 RTNGGKTYQVRV-------SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKL 77 (331)
Q Consensus 5 ~~~~g~~~~~~~-------~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~ 77 (331)
.++.|+..++++ ++|.+|..|.+|||+||+.||..+++.|+++++. ++..+....||||+|+.+||.++|+.
T Consensus 7 wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgar-vn~tnmgddtplhlaaahghrdivqk 85 (448)
T KOG0195|consen 7 WCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGAR-VNSTNMGDDTPLHLAAAHGHRDIVQK 85 (448)
T ss_pred hhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccc-cccccCCCCcchhhhhhcccHHHHHH
Confidence 456777777753 4667888999999999999999999999999998 88888888999999999999999999
Q ss_pred HHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 78 IYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 78 Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
|++..++ +|+.+..||||||+||..|...+.+-| +..|+.+++.|++|.||+|.|..
T Consensus 86 ll~~kad----vnavnehgntplhyacfwgydqiaedl-------------------i~~ga~v~icnk~g~tpldkakp 142 (448)
T KOG0195|consen 86 LLSRKAD----VNAVNEHGNTPLHYACFWGYDQIAEDL-------------------ISCGAAVNICNKKGMTPLDKAKP 142 (448)
T ss_pred HHHHhcc----cchhhccCCCchhhhhhhcHHHHHHHH-------------------HhccceeeecccCCCCchhhhch
Confidence 9999888 477999999999999999985543221 33688899999999999999854
Q ss_pred h
Q 046030 158 E 158 (331)
Q Consensus 158 ~ 158 (331)
.
T Consensus 143 ~ 143 (448)
T KOG0195|consen 143 M 143 (448)
T ss_pred H
Confidence 3
No 6
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.79 E-value=1.4e-19 Score=171.34 Aligned_cols=118 Identities=23% Similarity=0.288 Sum_probs=99.5
Q ss_pred ecccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccc-cCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhccc
Q 046030 16 VSIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELD-EEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDK 94 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~ 94 (331)
.+++..|++|.|+||+||.+++.+++++|++++++ ++..+ .-|.||||+|+++|+..+|++|++.|+++.. +|.
T Consensus 69 ~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gad-vn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~----~D~ 143 (600)
T KOG0509|consen 69 ESVNNPDREGVTLLHWAAINNRLDVARYLISHGAD-VNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTL----KDK 143 (600)
T ss_pred cCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCC-ccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCce----ecC
Confidence 45788899999999999999999999999999999 78887 6789999999999999999999999999765 999
Q ss_pred CCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 95 SGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 95 ~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
+|.||||+|++.|+.-.+-++ +..+++++.+|.+|+||+++|+.
T Consensus 144 ~G~~~lHla~~~~~~~~vayl-------------------l~~~~d~d~~D~~grTpLmwAay 187 (600)
T KOG0509|consen 144 QGLTPLHLAAQFGHTALVAYL-------------------LSKGADIDLRDNNGRTPLMWAAY 187 (600)
T ss_pred CCCcHHHHHHHhCchHHHHHH-------------------HHhcccCCCcCCCCCCHHHHHHH
Confidence 999999999999997655433 33456666666666666666643
No 7
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.78 E-value=7.2e-18 Score=159.81 Aligned_cols=131 Identities=18% Similarity=0.220 Sum_probs=108.6
Q ss_pred CCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHH
Q 046030 23 AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHL 102 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHl 102 (331)
.-+.||||+|+++|+..+|+.|+++|+| ++.+|.+|.||+|+|++.|+...+-+++..+.+.+. +|.+|+||||+
T Consensus 110 ~l~stPLHWAar~G~~~vv~lLlqhGAd-pt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~----~D~~grTpLmw 184 (600)
T KOG0509|consen 110 VLGSTPLHWAARNGHISVVDLLLQHGAD-PTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDL----RDNNGRTPLMW 184 (600)
T ss_pred CCCCCcchHHHHcCcHHHHHHHHHcCCC-CceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCC----cCCCCCCHHHH
Confidence 4578999999999999999999999999 899999999999999999999999999999987655 99999999999
Q ss_pred HHhhCCCCCCCCC--------------CCcHHhhHHhhhhhhhhhhhcC-cccccccccCCCCchhchHHh
Q 046030 103 AAQYSNPKPISKV--------------PGAALEMQRELITFKEVETIVK-PSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 103 Aa~~g~~~~~~~l--------------~~~~l~~~~~l~~~~~v~~l~~-~~~~~~~n~~G~Tpl~la~~~ 158 (331)
|+.+|+...+..| ...++|.+..-+..+.+..+.+ +++.+..|.+|+||+++|.+.
T Consensus 185 Aaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 185 AAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 9999997743322 1245666655555666664444 577788888889999888654
No 8
>PHA02791 ankyrin-like protein; Provisional
Probab=99.77 E-value=1.3e-18 Score=156.84 Aligned_cols=139 Identities=14% Similarity=0.102 Sum_probs=94.2
Q ss_pred cCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCc
Q 046030 19 PDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNN 98 (331)
Q Consensus 19 ~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~T 98 (331)
+.+|.+|+||||+|+..|+.++++.|++.+++ .+.. +|+||||+|+..|+.+++++|++.|++. |.+|.+|+|
T Consensus 24 ~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~-~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~Gadv----n~~d~~G~T 96 (284)
T PHA02791 24 FKADVHGHSALYYAIADNNVRLVCTLLNAGAL-KNLL--ENEFPLHQAATLEDTKIVKILLFSGMDD----SQFDDKGNT 96 (284)
T ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCC-CcCC--CCCCHHHHHHHCCCHHHHHHHHHCCCCC----CCCCCCCCC
Confidence 35677788888888888888888888888776 4443 3678888888888888888888887764 447888888
Q ss_pred HHHHHHhhCCCCCCCCCC------------C--cHHhhHHhhhhhhhhhhhcCcccccccc-cCCCCchhchHH-hhhhH
Q 046030 99 LLHLAAQYSNPKPISKVP------------G--AALEMQRELITFKEVETIVKPSFKEMKN-NDGKTPWELFTA-EHKTL 162 (331)
Q Consensus 99 pLHlAa~~g~~~~~~~l~------------~--~~l~~~~~l~~~~~v~~l~~~~~~~~~n-~~G~Tpl~la~~-~~~~l 162 (331)
|||+|+..|+.+++++|. | .+++.+...+..+.++.++... .+..| ..|.||||+|.. ++.++
T Consensus 97 pLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~-~~~~d~~~g~TpLh~Aa~~g~~ei 175 (284)
T PHA02791 97 ALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEI-PSTFDLAILLSCIHITIKNGHVDM 175 (284)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcC-CcccccccCccHHHHHHHcCCHHH
Confidence 888888888877765541 1 3455555555566666666421 11223 257888888844 45555
Q ss_pred HHH
Q 046030 163 LEE 165 (331)
Q Consensus 163 ~~~ 165 (331)
++.
T Consensus 176 v~l 178 (284)
T PHA02791 176 MIL 178 (284)
T ss_pred HHH
Confidence 543
No 9
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.77 E-value=1.1e-18 Score=140.13 Aligned_cols=118 Identities=19% Similarity=0.170 Sum_probs=95.6
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.+|.+|++|+||||-|+.+||.++|++|+..+++ .+.+...||||||-||...+.+++..|++.|++ +|++.+..
T Consensus 89 ~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn-~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaD----VnA~t~g~ 163 (228)
T KOG0512|consen 89 HVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN-KEAKTNEGWTPLHSACKWNNFEVAGRLLQHGAD----VNAQTKGL 163 (228)
T ss_pred cccccccccccHHHHHHhcCchHHHHHHHHccCC-cccccccCccchhhhhcccchhHHHHHHhccCc----cccccccc
Confidence 3788899999999999999999999999998888 788889999999999999999999999999988 46688888
Q ss_pred CcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhh--cCcccccccccCCCCchhchHHh
Q 046030 97 NNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETI--VKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l--~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
.||||+|+...+.... ++.+ .+......+|+.++||+++|.+-
T Consensus 164 ltpLhlaa~~rn~r~t-------------------~~~Ll~dryi~pg~~nn~eeta~~iARRT 208 (228)
T KOG0512|consen 164 LTPLHLAAGNRNSRDT-------------------LELLLHDRYIHPGLKNNLEETAFDIARRT 208 (228)
T ss_pred chhhHHhhcccchHHH-------------------HHHHhhccccChhhhcCccchHHHHHHHh
Confidence 8999999987753311 1112 23555667888999999999654
No 10
>PHA02791 ankyrin-like protein; Provisional
Probab=99.75 E-value=2.2e-18 Score=155.30 Aligned_cols=72 Identities=17% Similarity=0.129 Sum_probs=61.7
Q ss_pred cCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCC
Q 046030 35 SGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISK 114 (331)
Q Consensus 35 ~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~ 114 (331)
.++.+++++|++++++ ..|.+|+||||+|+.+|+.+++++|++.|++.+. + +|+||||+|+..|+.+++++
T Consensus 9 ~~~~~~~~~Lis~~a~---~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~----~--d~~TpLh~Aa~~g~~eiV~l 79 (284)
T PHA02791 9 WKSKQLKSFLSSKDAF---KADVHGHSALYYAIADNNVRLVCTLLNAGALKNL----L--ENEFPLHQAATLEDTKIVKI 79 (284)
T ss_pred cCHHHHHHHHHhCCCC---CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcC----C--CCCCHHHHHHHCCCHHHHHH
Confidence 4678999999998764 5799999999999999999999999999987432 4 47999999999999887655
Q ss_pred C
Q 046030 115 V 115 (331)
Q Consensus 115 l 115 (331)
|
T Consensus 80 L 80 (284)
T PHA02791 80 L 80 (284)
T ss_pred H
Confidence 4
No 11
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.75 E-value=3.7e-18 Score=165.93 Aligned_cols=135 Identities=19% Similarity=0.192 Sum_probs=111.1
Q ss_pred cccCCCCC-CCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 17 SIPDGDAA-NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 17 ~l~~~d~~-g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
.++..|.+ |.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+
T Consensus 159 din~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~i----n~~d~~ 233 (477)
T PHA02878 159 DINMKDRHKGNTALHYATENKDQRLTELLLSYGAN-VNIPDKTNNSPLHHAVKHYNKPIVHILLENGAST----DARDKC 233 (477)
T ss_pred CCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCC----CCCCCC
Confidence 35667777 99999999999999999999999999 7899999999999999999999999999999885 459999
Q ss_pred CCcHHHHHHhh-CCCCCCCCC--------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHHh
Q 046030 96 GNNLLHLAAQY-SNPKPISKV--------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 96 G~TpLHlAa~~-g~~~~~~~l--------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
|+||||+|+.. ++.+++++| ...+++.+ ....+.++.++ .|++++.+|.+|+||+++|.+.
T Consensus 234 g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~ 310 (477)
T PHA02878 234 GNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQ 310 (477)
T ss_pred CCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHH
Confidence 99999999976 566655443 12345554 23344566555 5899999999999999999753
No 12
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.74 E-value=1.5e-18 Score=167.61 Aligned_cols=136 Identities=18% Similarity=0.238 Sum_probs=108.6
Q ss_pred ecccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 16 VSIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
..+++.|++|.||||+||++|+.+.+..|+..+.+ ++.++.++.||||.||.+|+.+.|+-|++ -.+.. ++|+.|..
T Consensus 264 elv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~-I~~kn~d~~spLH~AA~yg~~ntv~rLL~-~~~~r-llne~D~~ 340 (929)
T KOG0510|consen 264 ELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGAS-INSKNKDEESPLHFAAIYGRINTVERLLQ-ESDTR-LLNESDLH 340 (929)
T ss_pred HHhhcccccCCchHHHHHHcCChhHHHHHHHcCCc-ccccCCCCCCchHHHHHcccHHHHHHHHh-CcCcc-cccccccc
Confidence 34788999999999999999999999999999999 89999999999999999999999999998 22222 36899999
Q ss_pred CCcHHHHHHhhCCCCCCCCCC--C--------------cHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhc
Q 046030 96 GNNLLHLAAQYSNPKPISKVP--G--------------AALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWEL 154 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~l~--~--------------~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~l 154 (331)
|+||||+|++.||.+++++|. | .++|.+..-+....|+.++ +|+++..+|++|.+++|.
T Consensus 341 g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 341 GMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT 416 (929)
T ss_pred CCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence 999999999999988877651 1 2334444444445555555 577777777777777775
No 13
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.73 E-value=5.2e-18 Score=163.01 Aligned_cols=135 Identities=21% Similarity=0.208 Sum_probs=109.7
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++.+|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|++.+ .+|.+|
T Consensus 116 d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad-~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n----~~~~~g 190 (434)
T PHA02874 116 DVNIKDAELKTFLHYAIKKGDLESIKMLFEYGAD-VNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN----VKDNNG 190 (434)
T ss_pred CCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC----CCCCCC
Confidence 3566788999999999999999999999999999 78999999999999999999999999999998754 489999
Q ss_pred CcHHHHHHhhCCCCCCCCCC-------------CcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 97 NNLLHLAAQYSNPKPISKVP-------------GAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l~-------------~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
+||||+|+..|+.+++++|. ..+++.+.... .+.++.+..+.+++.+|.+|.||+|+|..
T Consensus 191 ~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~-~~~i~~Ll~~~~in~~d~~G~TpLh~A~~ 263 (434)
T PHA02874 191 ESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN-RSAIELLINNASINDQDIDGSTPLHHAIN 263 (434)
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCC-hHHHHHHHcCCCCCCcCCCCCCHHHHHHh
Confidence 99999999999988776551 12344333222 23445555677778888888888888865
No 14
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.73 E-value=1e-17 Score=172.50 Aligned_cols=139 Identities=18% Similarity=0.214 Sum_probs=119.4
Q ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHH
Q 046030 21 GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLL 100 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 100 (331)
.+.++.++||.||..|+.++++.|++.+.+ ++..|.+|+||||+|+.+|+.+++++|++.|++. |.+|.+|+|||
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d-~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadi----n~~d~~G~TpL 595 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLKAKLD-PDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNV----HIRDANGNTAL 595 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCC----CCcCCCCCCHH
Confidence 444567999999999999999999999999 8999999999999999999999999999999885 55999999999
Q ss_pred HHHHhhCCCCCCCCCC-----------CcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH-hhhhHHH
Q 046030 101 HLAAQYSNPKPISKVP-----------GAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 101 HlAa~~g~~~~~~~l~-----------~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~-~~~~l~~ 164 (331)
|+|+..|+.+++++|. +..++.+...+..+.++.++ .|++++.+|++|+||+|+|.. ++.++++
T Consensus 596 ~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~ 672 (823)
T PLN03192 596 WNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVR 672 (823)
T ss_pred HHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHH
Confidence 9999999999877652 23566777777777788777 599999999999999999954 4555544
No 15
>PHA02946 ankyin-like protein; Provisional
Probab=99.73 E-value=1.3e-17 Score=160.11 Aligned_cols=92 Identities=16% Similarity=0.148 Sum_probs=72.4
Q ss_pred ecccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCC--HHHHHHHHhhCCchhhhhhhcc
Q 046030 16 VSIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRH--AETFKLIYEIGFSKELIATYVD 93 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~--~~iv~~Ll~~~~~~~~~in~~d 93 (331)
..++.+|.+|.||||+|+..|+.++++.|++++++ ++.+|.+|+||||+|+..++ .+++++|++.|++.+. ..|
T Consensus 63 advn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAd-in~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~---~~d 138 (446)
T PHA02946 63 YSPNETDDDGNYPLHIASKINNNRIVAMLLTHGAD-PNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINN---SVD 138 (446)
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCccc---ccC
Confidence 34678899999999999999999999999999999 78999999999999988764 7889999998887532 245
Q ss_pred cCCCcHHHHHHhhCCCCCC
Q 046030 94 KSGNNLLHLAAQYSNPKPI 112 (331)
Q Consensus 94 ~~G~TpLHlAa~~g~~~~~ 112 (331)
.+|.|||| |+..++.+++
T Consensus 139 ~~g~tpL~-aa~~~~~~vv 156 (446)
T PHA02946 139 EEGCGPLL-ACTDPSERVF 156 (446)
T ss_pred CCCCcHHH-HHHCCChHHH
Confidence 55666665 3333444433
No 16
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.71 E-value=1.6e-17 Score=143.90 Aligned_cols=136 Identities=19% Similarity=0.150 Sum_probs=105.5
Q ss_pred ccCCCCCCCCHHHHHHhcC--cHHHHHHHHHhCCCcccccc-cCCccHHHHHHHc---CCHHHHHHHHhhCCchhhhhhh
Q 046030 18 IPDGDAANSPQPLQNAHSG--NFKFLAVLIRSYPDLVHELD-EEDRSIFHIAVMH---RHAETFKLIYEIGFSKELIATY 91 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G--~~~~v~~Ll~~~~~~~~~~d-~~G~t~LH~Aa~~---g~~~iv~~Ll~~~~~~~~~in~ 91 (331)
++..|..|.||||+|+..+ +.++++.|++++++ ++.+| ..|+||||+|+.. ++.+++++|++.|++. |.
T Consensus 44 ~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gad-vn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadi----n~ 118 (209)
T PHA02859 44 VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGAD-VNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSI----TE 118 (209)
T ss_pred hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCC-CCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCC----CC
Confidence 5667888999999999754 89999999999999 67776 5899999998864 4789999999999884 55
Q ss_pred cccCCCcHHHHHHhh--CCCCCCCCCC-------------CcHHhhH-Hhhhhhhhhhhhc-CcccccccccCCCCchhc
Q 046030 92 VDKSGNNLLHLAAQY--SNPKPISKVP-------------GAALEMQ-RELITFKEVETIV-KPSFKEMKNNDGKTPWEL 154 (331)
Q Consensus 92 ~d~~G~TpLHlAa~~--g~~~~~~~l~-------------~~~l~~~-~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~l 154 (331)
+|.+|.||||+|+.. ++.+++++|. ..+++.. ......+.++.++ .|++++.+|..|+||+|+
T Consensus 119 ~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~l 198 (209)
T PHA02859 119 EDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDL 198 (209)
T ss_pred cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 999999999998764 4566665441 2334432 2223445566666 589999999999999999
Q ss_pred hHHh
Q 046030 155 FTAE 158 (331)
Q Consensus 155 a~~~ 158 (331)
|..+
T Consensus 199 a~~~ 202 (209)
T PHA02859 199 IKFR 202 (209)
T ss_pred Hhhh
Confidence 9654
No 17
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.71 E-value=1.2e-17 Score=139.56 Aligned_cols=117 Identities=19% Similarity=0.200 Sum_probs=95.2
Q ss_pred cccCCCCCCCCHHHHHHhcCcH----HHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHH---HHHHHhhCCchhhhh
Q 046030 17 SIPDGDAANSPQPLQNAHSGNF----KFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAET---FKLIYEIGFSKELIA 89 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~----~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~i---v~~Ll~~~~~~~~~i 89 (331)
.++..+.++.+++|.||+.|+. +++++|++.+++ ++.+|..|+||||+|+.+|+.+. +++|++.|++.
T Consensus 12 ~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~-~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadi---- 86 (166)
T PHA02743 12 GAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHL-LHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADI---- 86 (166)
T ss_pred HHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchh-hhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCC----
Confidence 3455667788999999999998 455566666666 78889999999999999988654 78999999884
Q ss_pred hhcc-cCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc--CcccccccccCCCCchhchHHh
Q 046030 90 TYVD-KSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV--KPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 90 n~~d-~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~--~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
|.+| ..|+||||+|+..++.+++ +.++ .+++++.+|.+|+||+|+|...
T Consensus 87 n~~d~~~g~TpLh~A~~~g~~~iv--------------------~~Ll~~~gad~~~~d~~g~tpL~~A~~~ 138 (166)
T PHA02743 87 NARELGTGNTLLHIAASTKNYELA--------------------EWLCRQLGVNLGAINYQHETAYHIAYKM 138 (166)
T ss_pred CCCCCCCCCcHHHHHHHhCCHHHH--------------------HHHHhccCCCccCcCCCCCCHHHHHHHc
Confidence 5588 5899999999999986653 3344 4888999999999999999653
No 18
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.71 E-value=2.6e-17 Score=160.08 Aligned_cols=142 Identities=15% Similarity=0.209 Sum_probs=113.3
Q ss_pred ccCCCCCCCCHHHHHH--hcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcC--CHHHHHHHHhhCCchhhhhhhcc
Q 046030 18 IPDGDAANSPQPLQNA--HSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHR--HAETFKLIYEIGFSKELIATYVD 93 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa--~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g--~~~iv~~Ll~~~~~~~~~in~~d 93 (331)
++..|..|.||||+|+ ..|+.++++.|++.+++ ++..|..|+||||+|+..| +.+++++|++.|++. |.+|
T Consensus 99 i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~di----n~~d 173 (480)
T PHA03100 99 VNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGAN-VNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDI----NAKN 173 (480)
T ss_pred CCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCc----cccc
Confidence 4567788999999999 99999999999999988 7888999999999999999 899999999999874 4488
Q ss_pred cCCCcHHHHHHhhCCCCCCCCCC-------------------CcHHhhHHhhhh--hhhhhhhc-CcccccccccCCCCc
Q 046030 94 KSGNNLLHLAAQYSNPKPISKVP-------------------GAALEMQRELIT--FKEVETIV-KPSFKEMKNNDGKTP 151 (331)
Q Consensus 94 ~~G~TpLHlAa~~g~~~~~~~l~-------------------~~~l~~~~~l~~--~~~v~~l~-~~~~~~~~n~~G~Tp 151 (331)
.+|+||||+|+..|+.+++++|. ..+++.+...+. .+.++.++ .|++++.+|.+|.||
T Consensus 174 ~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~Tp 253 (480)
T PHA03100 174 RYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTP 253 (480)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 89999999999999888776541 223444444444 56677666 478889999999999
Q ss_pred hhchHHh-hhhHHH
Q 046030 152 WELFTAE-HKTLLE 164 (331)
Q Consensus 152 l~la~~~-~~~l~~ 164 (331)
+|.|... +.++++
T Consensus 254 L~~A~~~~~~~iv~ 267 (480)
T PHA03100 254 LHYAVYNNNPEFVK 267 (480)
T ss_pred HHHHHHcCCHHHHH
Confidence 9999653 444433
No 19
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.71 E-value=6.7e-18 Score=139.26 Aligned_cols=123 Identities=20% Similarity=0.185 Sum_probs=92.4
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhC----CCcccccccCCccHHHHHHHcCCH---HHHHHHHhhCCchhhhhh
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSY----PDLVHELDEEDRSIFHIAVMHRHA---ETFKLIYEIGFSKELIAT 90 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~----~~~~~~~d~~G~t~LH~Aa~~g~~---~iv~~Ll~~~~~~~~~in 90 (331)
.+..|.+|.||||+|+..|+.+.+....... +.....+|.+|+||||+|+..|+. +++++|++.|++. |
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi----n 85 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI----N 85 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCc----c
Confidence 4677889999999999999843221111111 222456799999999999999987 4688999999874 5
Q ss_pred hcc-cCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc--CcccccccccCCCCchhchHHh-hhhHHH
Q 046030 91 YVD-KSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV--KPSFKEMKNNDGKTPWELFTAE-HKTLLE 164 (331)
Q Consensus 91 ~~d-~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~--~~~~~~~~n~~G~Tpl~la~~~-~~~l~~ 164 (331)
.+| .+|+||||+|+..++.++++ .++ .+.+++.+|+.|+||+++|... +.++++
T Consensus 86 ~~~~~~g~T~Lh~A~~~~~~~i~~--------------------~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~ 143 (154)
T PHA02736 86 GKERVFGNTPLHIAVYTQNYELAT--------------------WLCNQPGVNMEILNYAFKTPYYVACERHDAKMMN 143 (154)
T ss_pred ccCCCCCCcHHHHHHHhCCHHHHH--------------------HHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHH
Confidence 587 48999999999999866543 333 3788999999999999999753 444443
No 20
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.70 E-value=2.7e-17 Score=157.04 Aligned_cols=142 Identities=13% Similarity=0.069 Sum_probs=103.6
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++.++.+|.||||+|+..|+.++++.|++.+.+ .+..+..|+||||.|+..|+.+++++|++.|.... +..+.+|+
T Consensus 28 ~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~---~~~~~~g~ 103 (413)
T PHA02875 28 PNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAI-PDVKYPDIESELHDAVEEGDVKAVEELLDLGKFAD---DVFYKDGM 103 (413)
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-ccccCCCcccHHHHHHHCCCHHHHHHHHHcCCccc---ccccCCCC
Confidence 344556788888888888888888888888877 66677778888888888888888888888776532 23566788
Q ss_pred cHHHHHHhhCCCCCCCCCC-------------CcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHHh-hhhH
Q 046030 98 NLLHLAAQYSNPKPISKVP-------------GAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTAE-HKTL 162 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~-------------~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~-~~~l 162 (331)
||||+|+..|+.++++.|. ..++|.+...+..+.++.++ .+++++.+|..|.||+|+|... +.++
T Consensus 104 tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~ei 183 (413)
T PHA02875 104 TPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAI 183 (413)
T ss_pred CHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 8888888888877665441 23566666666666677666 4778888888888888888543 3444
Q ss_pred H
Q 046030 163 L 163 (331)
Q Consensus 163 ~ 163 (331)
+
T Consensus 184 v 184 (413)
T PHA02875 184 C 184 (413)
T ss_pred H
Confidence 3
No 21
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.70 E-value=2.7e-17 Score=142.54 Aligned_cols=124 Identities=10% Similarity=0.087 Sum_probs=88.7
Q ss_pred CCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcC--CHHHHHHHHhhCCchhhhhhhcc-cCCCcH
Q 046030 23 AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHR--HAETFKLIYEIGFSKELIATYVD-KSGNNL 99 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g--~~~iv~~Ll~~~~~~~~~in~~d-~~G~Tp 99 (331)
..+.||||.|++.|+.+.|+.|++. .+..|..|+||||+|+.++ +.+++++|++.|++. |.+| .+|.||
T Consensus 19 ~~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadv----n~~~~~~g~Tp 90 (209)
T PHA02859 19 YRYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADV----NFKTRDNNLSA 90 (209)
T ss_pred hccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCC----CccCCCCCCCH
Confidence 4579999999999999999999975 4567899999999999865 899999999999985 4476 589999
Q ss_pred HHHHHhhC---CCCCCCCCC-------------CcHHhhHHh--hhhhhhhhhhc-CcccccccccCCCCchhc
Q 046030 100 LHLAAQYS---NPKPISKVP-------------GAALEMQRE--LITFKEVETIV-KPSFKEMKNNDGKTPWEL 154 (331)
Q Consensus 100 LHlAa~~g---~~~~~~~l~-------------~~~l~~~~~--l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~l 154 (331)
||+|+..+ +.+++++|. ..+++.+.. ....+.++.++ .+++++.+|.+|.||+|.
T Consensus 91 Lh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~ 164 (209)
T PHA02859 91 LHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYS 164 (209)
T ss_pred HHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHH
Confidence 99988643 456554431 123333221 12334444444 356666666666666664
No 22
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.70 E-value=5.2e-17 Score=156.11 Aligned_cols=146 Identities=14% Similarity=0.233 Sum_probs=108.8
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhh----------
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKEL---------- 87 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~---------- 87 (331)
++..+.+|.||||.|+..|+.++|+.|++.+++ ++..+..|.||||.|+..|+.+++++|++.|++...
T Consensus 28 ~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~-~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 106 (434)
T PHA02874 28 INISVDETTTPLIDAIRSGDAKIVELFIKHGAD-INHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDM 106 (434)
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHH
Confidence 344566788999999999999999999998888 677888888999999988888888888887764321
Q ss_pred ---------hhhhcccCCCcHHHHHHhhCCCCCCCCCC-------------CcHHhhHHhhhhhhhhhhhc-Cccccccc
Q 046030 88 ---------IATYVDKSGNNLLHLAAQYSNPKPISKVP-------------GAALEMQRELITFKEVETIV-KPSFKEMK 144 (331)
Q Consensus 88 ---------~in~~d~~G~TpLHlAa~~g~~~~~~~l~-------------~~~l~~~~~l~~~~~v~~l~-~~~~~~~~ 144 (331)
.+|.+|.+|.||||+|+..|+.++++.|. ..+++.+...+..+.++.++ .|++++.+
T Consensus 107 i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~ 186 (434)
T PHA02874 107 IKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVK 186 (434)
T ss_pred HHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCC
Confidence 13567888888888888888877665441 24566666666667777666 47777888
Q ss_pred ccCCCCchhchHH-hhhhHHH
Q 046030 145 NNDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 145 n~~G~Tpl~la~~-~~~~l~~ 164 (331)
|.+|.||+|+|.+ ++.++++
T Consensus 187 ~~~g~tpL~~A~~~g~~~iv~ 207 (434)
T PHA02874 187 DNNGESPLHNAAEYGDYACIK 207 (434)
T ss_pred CCCCCCHHHHHHHcCCHHHHH
Confidence 8888888888854 3344433
No 23
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.69 E-value=3.5e-17 Score=147.81 Aligned_cols=116 Identities=12% Similarity=0.080 Sum_probs=98.0
Q ss_pred ccCCCCCCCCH-HHHHHhcCcHHHHHHHHHhCCCccccc----ccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhc
Q 046030 18 IPDGDAANSPQ-PLQNAHSGNFKFLAVLIRSYPDLVHEL----DEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYV 92 (331)
Q Consensus 18 l~~~d~~g~t~-Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~----d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~ 92 (331)
+..+|.+|+|+ ||.|++.|+.++++.|+++|++ ++.+ |..|.||||+|+..++.+++++|++.|++. |.+
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAd-iN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADV----N~~ 99 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGAD-PEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADV----NRY 99 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCC-ccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc----Ccc
Confidence 56788888775 5666777999999999999998 6666 468999999999999999999999999985 445
Q ss_pred -ccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 93 -DKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 93 -d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
+..|.||||+|+..++.+++++| +..|++++.+|.+|.||+++|.+
T Consensus 100 ~~~~g~TpLh~Aa~~~~~eivklL-------------------L~~GAdin~kd~~G~TpL~~A~~ 146 (300)
T PHA02884 100 AEEAKITPLYISVLHGCLKCLEIL-------------------LSYGADINIQTNDMVTPIELALM 146 (300)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHH-------------------HHCCCCCCCCCCCCCCHHHHHHH
Confidence 45799999999999997654433 34689999999999999999976
No 24
>PHA02798 ankyrin-like protein; Provisional
Probab=99.69 E-value=3.9e-17 Score=159.21 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=41.8
Q ss_pred cccCCCCCCCCHHHHHHhc-----CcHHHHHHHHHhCCCcccccccCCccHHHHHHHcC---CHHHHHHHHhhCCchhhh
Q 046030 17 SIPDGDAANSPQPLQNAHS-----GNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHR---HAETFKLIYEIGFSKELI 88 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~-----G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g---~~~iv~~Ll~~~~~~~~~ 88 (331)
.++..|.+|.||||.|+.+ ++.++++.|++++++ ++.+|..|+||||+|+.++ +.+++++|++.|++.
T Consensus 63 dvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gad-iN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv--- 138 (489)
T PHA02798 63 NVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGAD-INKKNSDGETPLYCLLSNGYINNLEILLFMIENGADT--- 138 (489)
T ss_pred CCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCC-CCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCc---
Confidence 3444444555555554432 444555555555554 4445555555555555443 344555555555442
Q ss_pred hhhcccCCCcHHHHHHhhCC
Q 046030 89 ATYVDKSGNNLLHLAAQYSN 108 (331)
Q Consensus 89 in~~d~~G~TpLHlAa~~g~ 108 (331)
|.+|.+|.||||+|++.++
T Consensus 139 -n~~d~~g~tpL~~a~~~~~ 157 (489)
T PHA02798 139 -TLLDKDGFTMLQVYLQSNH 157 (489)
T ss_pred -cccCCCCCcHHHHHHHcCC
Confidence 2245555555555554443
No 25
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.69 E-value=5.9e-17 Score=157.54 Aligned_cols=93 Identities=18% Similarity=0.268 Sum_probs=69.2
Q ss_pred HHHHHHHhCCCcccccccC-CccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCc
Q 046030 40 FLAVLIRSYPDLVHELDEE-DRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGA 118 (331)
Q Consensus 40 ~v~~Ll~~~~~~~~~~d~~-G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~ 118 (331)
+++.|++.+++ ++..|.. |+||||+|+.+|+.+++++|++.|++. |.+|.+|+||||+|+..|+.++++.|
T Consensus 149 iv~~Ll~~gad-in~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~----n~~d~~g~tpLh~A~~~~~~~iv~~L--- 220 (477)
T PHA02878 149 ITKLLLSYGAD-INMKDRHKGNTALHYATENKDQRLTELLLSYGANV----NIPDKTNNSPLHHAVKHYNKPIVHIL--- 220 (477)
T ss_pred HHHHHHHcCCC-CCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCC----CCcCCCCCCHHHHHHHhCCHHHHHHH---
Confidence 34444444555 5667777 999999999999999999999999884 55899999999999999987765543
Q ss_pred HHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchH
Q 046030 119 ALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFT 156 (331)
Q Consensus 119 ~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~ 156 (331)
+..|++++.+|.+|+||+|+|.
T Consensus 221 ----------------l~~ga~in~~d~~g~TpLh~A~ 242 (477)
T PHA02878 221 ----------------LENGASTDARDKCGNTPLHISV 242 (477)
T ss_pred ----------------HHcCCCCCCCCCCCCCHHHHHH
Confidence 1245556666666666666654
No 26
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.69 E-value=5.3e-17 Score=154.99 Aligned_cols=138 Identities=12% Similarity=0.092 Sum_probs=86.7
Q ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHH
Q 046030 22 DAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLH 101 (331)
Q Consensus 22 d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH 101 (331)
+.++.||||.|+..|+.++++.|++.+++..+..+.+|+||||+|+..|+.+++++|++.|++.+ .+|.+|.||||
T Consensus 65 ~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~----~~~~~g~tpLh 140 (413)
T PHA02875 65 YPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPD----IPNTDKFSPLH 140 (413)
T ss_pred CCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC----CCCCCCCCHHH
Confidence 45566777777777777777777766665444555666777777777777777777777666643 36666777777
Q ss_pred HHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCC-CchhchHH-hhhhHH
Q 046030 102 LAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGK-TPWELFTA-EHKTLL 163 (331)
Q Consensus 102 lAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~-Tpl~la~~-~~~~l~ 163 (331)
+|+..|+.++++.| ...+++.+...+..+.++.++ .|++++..+.+|. ||+++|.+ ++.+++
T Consensus 141 ~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv 218 (413)
T PHA02875 141 LAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIV 218 (413)
T ss_pred HHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHH
Confidence 77766666554433 123455555555555566665 5888888887775 67776743 334433
No 27
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.68 E-value=7.5e-16 Score=149.25 Aligned_cols=108 Identities=25% Similarity=0.303 Sum_probs=91.3
Q ss_pred cCCceeEEE------ecccCCCCCCCCHHHHHHhcCcHHHHHHHHH-hCCCcccccccCCccHHHHHHHcCCHHHHHHHH
Q 046030 7 NGGKTYQVR------VSIPDGDAANSPQPLQNAHSGNFKFLAVLIR-SYPDLVHELDEEDRSIFHIAVMHRHAETFKLIY 79 (331)
Q Consensus 7 ~~g~~~~~~------~~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~-~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll 79 (331)
+.|+++.++ .+++.+++++.||||.||..|+.+.|+.|++ .+....+..|..|+||||+|+++||.+++++|+
T Consensus 282 r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl 361 (929)
T KOG0510|consen 282 RQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLL 361 (929)
T ss_pred HcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHH
Confidence 345555543 5578888999999999999999999999999 444456888999999999999999999999999
Q ss_pred hhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCC
Q 046030 80 EIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 80 ~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l 115 (331)
+.|+.... ..+.|.+|+||||+|++.|+..+++.+
T Consensus 362 ~~GA~~~~-~~e~D~dg~TaLH~Aa~~g~~~av~~L 396 (929)
T KOG0510|consen 362 NKGALFLN-MSEADSDGNTALHLAAKYGNTSAVQKL 396 (929)
T ss_pred hcChhhhc-ccccccCCchhhhHHHHhccHHHHHHH
Confidence 99987531 125699999999999999999988765
No 28
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.68 E-value=4.1e-17 Score=149.36 Aligned_cols=121 Identities=19% Similarity=0.247 Sum_probs=98.6
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
+|+...-..|||.-||..||.|+|++|++++.| ++..|..|.|.||+||..|+.+|+++|++.|++ +|.++..||
T Consensus 110 VN~tT~TNStPLraACfDG~leivKyLvE~gad-~~IanrhGhTcLmIa~ykGh~~I~qyLle~gAD----vn~ks~kGN 184 (615)
T KOG0508|consen 110 VNDTTRTNSTPLRAACFDGHLEIVKYLVEHGAD-PEIANRHGHTCLMIACYKGHVDIAQYLLEQGAD----VNAKSYKGN 184 (615)
T ss_pred cccccccCCccHHHHHhcchhHHHHHHHHcCCC-CcccccCCCeeEEeeeccCchHHHHHHHHhCCC----cchhcccCc
Confidence 455555667999999999999999999999999 899999999999999999999999999999998 466999999
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLL 163 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~ 163 (331)
|+||.++..|+.+++++| +.....-.+|..|.|||-.|.. +|.+++
T Consensus 185 TALH~caEsG~vdivq~L--------------------l~~ga~i~~d~~GmtPL~~Aa~tG~~~iV 231 (615)
T KOG0508|consen 185 TALHDCAESGSVDIVQLL--------------------LKHGAKIDVDGHGMTPLLLAAVTGHTDIV 231 (615)
T ss_pred hHHHhhhhcccHHHHHHH--------------------HhCCceeeecCCCCchHHHHhhhcchHHH
Confidence 999999999998765543 3322234577789999999843 444443
No 29
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.67 E-value=9.7e-17 Score=156.04 Aligned_cols=144 Identities=17% Similarity=0.187 Sum_probs=113.3
Q ss_pred ecccCCCCCCCCHHHHHHhcC--cHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcc
Q 046030 16 VSIPDGDAANSPQPLQNAHSG--NFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVD 93 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh~Aa~~G--~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d 93 (331)
..++..|.+|.||||.|+..| +.++++.|++++++ ++.+|..|+||||+|+..|+.+++++|++.|++.+. .|
T Consensus 132 ~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~d-in~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~----~~ 206 (480)
T PHA03100 132 ANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVD-INAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINA----GD 206 (480)
T ss_pred CCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCC-cccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccC----CC
Confidence 346677888999999999999 89999999999888 788888999999999999999999999998887543 77
Q ss_pred cCC------CcHHHHHHhhCC--CCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCc
Q 046030 94 KSG------NNLLHLAAQYSN--PKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTP 151 (331)
Q Consensus 94 ~~G------~TpLHlAa~~g~--~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tp 151 (331)
..| .||||.|+..|+ .++++.| ...+++.+...+..+.++.++ .|++++.+|.+|+||
T Consensus 207 ~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tp 286 (480)
T PHA03100 207 IETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTP 286 (480)
T ss_pred CCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcH
Confidence 777 888888888887 5554433 224566666666667777776 588999999999999
Q ss_pred hhchHH-hhhhHHH
Q 046030 152 WELFTA-EHKTLLE 164 (331)
Q Consensus 152 l~la~~-~~~~l~~ 164 (331)
+++|.+ ++.++++
T Consensus 287 l~~A~~~~~~~iv~ 300 (480)
T PHA03100 287 LHIAILNNNKEIFK 300 (480)
T ss_pred HHHHHHhCCHHHHH
Confidence 999965 3444443
No 30
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.67 E-value=2.1e-16 Score=157.88 Aligned_cols=136 Identities=12% Similarity=0.002 Sum_probs=81.7
Q ss_pred cccCC-CCCCCCHHHHHHh--cCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCC--HHHHHHHHhhCCchhhhhhh
Q 046030 17 SIPDG-DAANSPQPLQNAH--SGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRH--AETFKLIYEIGFSKELIATY 91 (331)
Q Consensus 17 ~l~~~-d~~g~t~Lh~Aa~--~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~--~~iv~~Ll~~~~~~~~~in~ 91 (331)
.++.+ |..|.||||.|+. .++.++++.|++.+++ ++.+|..|+||||+|+.+|+ .+++++|++.|++. |.
T Consensus 168 DIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GAD-VN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADV----N~ 242 (764)
T PHA02716 168 NLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVN-VNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDM----DM 242 (764)
T ss_pred CcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC----CC
Confidence 45555 5566666666543 3456666666666666 56666666666666666664 36666666666663 33
Q ss_pred cccCCCcHHHHH-------------------------------------HhhCCCCCCCCCC-------------CcHHh
Q 046030 92 VDKSGNNLLHLA-------------------------------------AQYSNPKPISKVP-------------GAALE 121 (331)
Q Consensus 92 ~d~~G~TpLHlA-------------------------------------a~~g~~~~~~~l~-------------~~~l~ 121 (331)
+|.+|+||||.| ++.|+.++++.|. ..++|
T Consensus 243 kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH 322 (764)
T PHA02716 243 KCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLH 322 (764)
T ss_pred CCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHH
Confidence 666666666643 3455555444331 12333
Q ss_pred hHHh--hhhhhhhhhhc-CcccccccccCCCCchhchHH
Q 046030 122 MQRE--LITFKEVETIV-KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 122 ~~~~--l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 157 (331)
.+.. ....+.++.++ .|++++.+|++|+||+|+|..
T Consensus 323 ~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~ 361 (764)
T PHA02716 323 QYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLS 361 (764)
T ss_pred HHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHH
Confidence 3211 11234455555 589999999999999998753
No 31
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.66 E-value=1e-16 Score=133.80 Aligned_cols=110 Identities=11% Similarity=0.126 Sum_probs=91.3
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHH---HHHHHHhCCCcccccc-cCCccHHHHHHHcCCHHHHHHHHh-hCCchhhhhhh
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKF---LAVLIRSYPDLVHELD-EEDRSIFHIAVMHRHAETFKLIYE-IGFSKELIATY 91 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~---v~~Ll~~~~~~~~~~d-~~G~t~LH~Aa~~g~~~iv~~Ll~-~~~~~~~~in~ 91 (331)
.++.+|.+|+||||+|+..|+.+. ++.|++.+.+ ++.+| ..|+||||+|+..++.+++++|++ .|.+. +.
T Consensus 49 ~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad-in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~----~~ 123 (166)
T PHA02743 49 LLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD-INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNL----GA 123 (166)
T ss_pred hhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC-CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCc----cC
Confidence 356678899999999999988654 7899999998 78888 589999999999999999999995 68775 44
Q ss_pred cccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCC
Q 046030 92 VDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKT 150 (331)
Q Consensus 92 ~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~T 150 (331)
+|.+|.||||+|+..++.+++++| +..+++++.++..|..
T Consensus 124 ~d~~g~tpL~~A~~~~~~~iv~~L-------------------l~~ga~~~~~~~~~~~ 163 (166)
T PHA02743 124 INYQHETAYHIAYKMRDRRMMEIL-------------------RANGAVCDDPLSIGLS 163 (166)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCcccCCcc
Confidence 999999999999999986654433 2357788888877754
No 32
>PHA03095 ankyrin-like protein; Provisional
Probab=99.65 E-value=2.4e-16 Score=152.84 Aligned_cols=116 Identities=18% Similarity=0.183 Sum_probs=92.7
Q ss_pred cccCCCCCCCCHHHHHHhcC---cHHHHHHHHHhCCCcccccccCCccHHHHHHHcC-CHHHHHHHHhhCCchhhhhhhc
Q 046030 17 SIPDGDAANSPQPLQNAHSG---NFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHR-HAETFKLIYEIGFSKELIATYV 92 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G---~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g-~~~iv~~Ll~~~~~~~~~in~~ 92 (331)
.++..+..|.||||+|+..| +.++++.|++.+++ ++.+|..|+||||+|+.+| +.+++++|++.|++. |.+
T Consensus 39 ~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gad-in~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~i----n~~ 113 (471)
T PHA03095 39 DVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGAD-VNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADV----NAK 113 (471)
T ss_pred CcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCC----CCC
Confidence 35677888999999999998 99999999999999 8999999999999999999 599999999999984 559
Q ss_pred ccCCCcHHHHHHh--hCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchH
Q 046030 93 DKSGNNLLHLAAQ--YSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFT 156 (331)
Q Consensus 93 d~~G~TpLHlAa~--~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~ 156 (331)
|.+|+||||+|+. .++.+++++| +..|++++.+|.+|.||+|++.
T Consensus 114 ~~~g~tpLh~a~~~~~~~~~iv~~L-------------------l~~gad~~~~d~~g~tpL~~a~ 160 (471)
T PHA03095 114 DKVGRTPLHVYLSGFNINPKVIRLL-------------------LRKGADVNALDLYGMTPLAVLL 160 (471)
T ss_pred CCCCCCHHHHHhhCCcCCHHHHHHH-------------------HHcCCCCCccCCCCCCHHHHHH
Confidence 9999999999994 3444443332 1135555555666666665553
No 33
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.64 E-value=3.2e-16 Score=153.07 Aligned_cols=137 Identities=15% Similarity=0.139 Sum_probs=93.7
Q ss_pred ecccCCCCCCCCHHHHHHhc---CcHHHHHHHHHhCCCcc-cccccCCccHHHHHHHc--CCHHHHHHHHhhCCchhhhh
Q 046030 16 VSIPDGDAANSPQPLQNAHS---GNFKFLAVLIRSYPDLV-HELDEEDRSIFHIAVMH--RHAETFKLIYEIGFSKELIA 89 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh~Aa~~---G~~~~v~~Ll~~~~~~~-~~~d~~G~t~LH~Aa~~--g~~~iv~~Ll~~~~~~~~~i 89 (331)
.+++.+|.+|.||||.|+.. |+.++++.|++++++ + +.+|..|+||||+|+.. ++.+++++|++.|++.
T Consensus 99 adin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gad-in~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi---- 173 (494)
T PHA02989 99 ADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGIN-VNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNL---- 173 (494)
T ss_pred CCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCC-cccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc----
Confidence 45788888999999987754 678999999999988 6 78889999999998764 5789999999999874
Q ss_pred hh-cccCCCcHHHHHHhhC----CCCCCCCCC--C-----------cHHhhHHh------hhhhhhhhhhcCcccccccc
Q 046030 90 TY-VDKSGNNLLHLAAQYS----NPKPISKVP--G-----------AALEMQRE------LITFKEVETIVKPSFKEMKN 145 (331)
Q Consensus 90 n~-~d~~G~TpLHlAa~~g----~~~~~~~l~--~-----------~~l~~~~~------l~~~~~v~~l~~~~~~~~~n 145 (331)
+. .|..|.||||.|++.+ +.+++++|. | +.++...+ ....+.++.+..+++++.+|
T Consensus 174 ~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d 253 (494)
T PHA02989 174 FEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKD 253 (494)
T ss_pred cccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCC
Confidence 33 5778899999887654 445544331 1 11221110 01123344445566666666
Q ss_pred cCCCCchhchHH
Q 046030 146 NDGKTPWELFTA 157 (331)
Q Consensus 146 ~~G~Tpl~la~~ 157 (331)
.+|.||+|+|..
T Consensus 254 ~~G~TpL~~Aa~ 265 (494)
T PHA02989 254 KKGFNPLLISAK 265 (494)
T ss_pred CCCCCHHHHHHH
Confidence 666666666643
No 34
>PHA02946 ankyin-like protein; Provisional
Probab=99.64 E-value=6.3e-16 Score=148.56 Aligned_cols=137 Identities=20% Similarity=0.243 Sum_probs=103.7
Q ss_pred cccCCCCCCCCHHHHHHhcC--cHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhccc
Q 046030 17 SIPDGDAANSPQPLQNAHSG--NFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDK 94 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G--~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~ 94 (331)
.++.+|.+|.||||+|+..+ +.++++.|++++++.....|..|+|||| |+..++.+++++|++.|++. +.+|.
T Consensus 97 din~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~----~~~d~ 171 (446)
T PHA02946 97 DPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEA----RIVDK 171 (446)
T ss_pred CCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccc----cccCC
Confidence 35667889999999998765 4788999999998843356888999997 66678889999999888774 44888
Q ss_pred CCCcHHHHHHhhCCC--CCCCCC-------------CCcHHhhHHhhh--hhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 95 SGNNLLHLAAQYSNP--KPISKV-------------PGAALEMQRELI--TFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 95 ~G~TpLHlAa~~g~~--~~~~~l-------------~~~~l~~~~~l~--~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
.|+||||+|+..++. +++++| ...++|.+...+ ..+.++.+.++++++.+|++|+||+|+|.+
T Consensus 172 ~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~gadin~~d~~G~TpLh~A~~ 251 (446)
T PHA02946 172 FGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLPSTDVNKQNKFGDSPLTLLIK 251 (446)
T ss_pred CCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 899999888876654 223222 225666655432 455677777889999999999999999976
Q ss_pred h
Q 046030 158 E 158 (331)
Q Consensus 158 ~ 158 (331)
.
T Consensus 252 ~ 252 (446)
T PHA02946 252 T 252 (446)
T ss_pred h
Confidence 4
No 35
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.64 E-value=3.4e-17 Score=145.59 Aligned_cols=127 Identities=17% Similarity=0.227 Sum_probs=103.7
Q ss_pred EEecccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccc-------------------------------------
Q 046030 14 VRVSIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELD------------------------------------- 56 (331)
Q Consensus 14 ~~~~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d------------------------------------- 56 (331)
.++.+|--|.+|+|+||||+.++++++|+.||+.+-..++..|
T Consensus 257 L~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKA 336 (452)
T KOG0514|consen 257 LEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKA 336 (452)
T ss_pred HHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhh
Confidence 3456788899999999999999999999999986543333222
Q ss_pred -cCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhh
Q 046030 57 -EEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETI 135 (331)
Q Consensus 57 -~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l 135 (331)
..|+|+|++|+.+|+.++|+.|+..|++. |.+|.+|-|+|+.|+.+||.+++++| .-
T Consensus 337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdV----NiQDdDGSTALMCA~EHGhkEivklL------------------LA 394 (452)
T KOG0514|consen 337 SQHGQTALMLAVSHGRVDMVKALLACGADV----NIQDDDGSTALMCAAEHGHKEIVKLL------------------LA 394 (452)
T ss_pred hhhcchhhhhhhhcCcHHHHHHHHHccCCC----ccccCCccHHHhhhhhhChHHHHHHH------------------hc
Confidence 34788999999999999999999999995 55999999999999999998876554 12
Q ss_pred cCcccccccccCCCCchhchHH-hhhhH
Q 046030 136 VKPSFKEMKNNDGKTPWELFTA-EHKTL 162 (331)
Q Consensus 136 ~~~~~~~~~n~~G~Tpl~la~~-~~~~l 162 (331)
.+..+....|.+|-|+|.+|.+ +|+|+
T Consensus 395 ~p~cd~sLtD~DgSTAl~IAleagh~eI 422 (452)
T KOG0514|consen 395 VPSCDISLTDVDGSTALSIALEAGHREI 422 (452)
T ss_pred cCcccceeecCCCchhhhhHHhcCchHH
Confidence 4688899999999999999954 56554
No 36
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.64 E-value=1.7e-16 Score=158.53 Aligned_cols=142 Identities=9% Similarity=0.076 Sum_probs=102.0
Q ss_pred ccCCCCCCCCHHHHH-----HhcCcHHHHHHHHHhC-CCccccc-ccCCccHHHHHHHc--CCHHHHHHHHhhCCchhhh
Q 046030 18 IPDGDAANSPQPLQN-----AHSGNFKFLAVLIRSY-PDLVHEL-DEEDRSIFHIAVMH--RHAETFKLIYEIGFSKELI 88 (331)
Q Consensus 18 l~~~d~~g~t~Lh~A-----a~~G~~~~v~~Ll~~~-~~~~~~~-d~~G~t~LH~Aa~~--g~~~iv~~Ll~~~~~~~~~ 88 (331)
....++++..+++.. ...++.++++.|++.+ ++ ++.+ |..|+||||+|+.+ ++.+++++|++.|++.
T Consensus 130 ~~~~~~~d~~~~~~y~~al~~~~v~leiVk~LLe~G~AD-IN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADV--- 205 (764)
T PHA02716 130 FDIPNNGDMDILYTYFNSPNTRGIDLDLIKYMVDVGIVN-LNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNV--- 205 (764)
T ss_pred hcCCCcccchHHHHHHhhhcccCCCHHHHHHHHHCCCCC-cccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCC---
Confidence 334444555555543 4579999999999999 88 7777 89999999998754 6789999999999884
Q ss_pred hhhcccCCCcHHHHHHhhCCC--CCCCCCC-------------CcHHhhHH-----------------------------
Q 046030 89 ATYVDKSGNNLLHLAAQYSNP--KPISKVP-------------GAALEMQR----------------------------- 124 (331)
Q Consensus 89 in~~d~~G~TpLHlAa~~g~~--~~~~~l~-------------~~~l~~~~----------------------------- 124 (331)
|.+|.+|+||||+|++.|+. +++++|. ..+++...
T Consensus 206 -N~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~ 284 (764)
T PHA02716 206 -NLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMI 284 (764)
T ss_pred -CCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhh
Confidence 55999999999999999964 5555431 12333210
Q ss_pred --------hhhhhhhhhhhc-CcccccccccCCCCchhchHH---hhhhHHH
Q 046030 125 --------ELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA---EHKTLLE 164 (331)
Q Consensus 125 --------~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~---~~~~l~~ 164 (331)
..+..+.++.++ .|++++.+|.+|+||+|.|.. .+.++++
T Consensus 285 L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVk 336 (764)
T PHA02716 285 LHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIK 336 (764)
T ss_pred hHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHH
Confidence 011234455555 588999999999999998743 2345544
No 37
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.64 E-value=2.6e-16 Score=126.66 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=98.6
Q ss_pred HHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhC
Q 046030 28 QPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYS 107 (331)
Q Consensus 28 ~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g 107 (331)
-+.+|+..+....|+.|++..++.++.+|.+|.||||-|+.+|+.+|++.|+..|+++. ++..+|+||||-||+.+
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~----a~T~~GWTPLhSAckWn 141 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKE----AKTNEGWTPLHSACKWN 141 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcc----cccccCccchhhhhccc
Confidence 46889999999999999999999999999999999999999999999999999999964 49999999999999999
Q ss_pred CCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 108 NPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 108 ~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
+.+++.+| +-+|+++++..+...||||+++..
T Consensus 142 N~~va~~L-------------------LqhgaDVnA~t~g~ltpLhlaa~~ 173 (228)
T KOG0512|consen 142 NFEVAGRL-------------------LQHGADVNAQTKGLLTPLHLAAGN 173 (228)
T ss_pred chhHHHHH-------------------HhccCcccccccccchhhHHhhcc
Confidence 98876544 457999999999999999999754
No 38
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.64 E-value=1.2e-16 Score=133.08 Aligned_cols=120 Identities=15% Similarity=0.116 Sum_probs=107.2
Q ss_pred EecccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhccc
Q 046030 15 RVSIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDK 94 (331)
Q Consensus 15 ~~~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~ 94 (331)
+..+|..|+.|.|||.+|+.+|++++|++|++.++| ++..-....++|.+|+..|..++|++|+.++.+. |.-|.
T Consensus 150 ~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAd-p~~lgk~resALsLAt~ggytdiV~lLL~r~vdV----NvyDw 224 (296)
T KOG0502|consen 150 NNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGAD-PDALGKYRESALSLATRGGYTDIVELLLTREVDV----NVYDW 224 (296)
T ss_pred hccccCccccCchHhHHHHhcCchHHHHHHHHcCCC-hhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCc----ceecc
Confidence 445889999999999999999999999999999999 7888888999999999999999999999999884 55999
Q ss_pred CCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 95 SGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 95 ~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
+|-|||-+|++-+|.+|++.| +..|++++..+..|++++++|..-
T Consensus 225 NGgTpLlyAvrgnhvkcve~L-------------------l~sGAd~t~e~dsGy~~mdlAVal 269 (296)
T KOG0502|consen 225 NGGTPLLYAVRGNHVKCVESL-------------------LNSGADVTQEDDSGYWIMDLAVAL 269 (296)
T ss_pred CCCceeeeeecCChHHHHHHH-------------------HhcCCCcccccccCCcHHHHHHHh
Confidence 999999999999997664433 346999999999999999999543
No 39
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.64 E-value=3.9e-16 Score=160.83 Aligned_cols=119 Identities=19% Similarity=0.233 Sum_probs=91.2
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhh---------
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKEL--------- 87 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~--------- 87 (331)
+++..|.+|+||||+||..|+.++++.|++++++ ++.+|.+|+||||+|+..|+.+++++|++.++..+.
T Consensus 550 d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad-in~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~ 628 (823)
T PLN03192 550 DPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACN-VHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCT 628 (823)
T ss_pred CCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHH
Confidence 4678899999999999999999999999999998 899999999999988888777777766554432110
Q ss_pred ------------------hhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-CcccccccccCC
Q 046030 88 ------------------IATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV-KPSFKEMKNNDG 148 (331)
Q Consensus 88 ------------------~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G 148 (331)
.+|.+|.+|+||||+|+..|+.++ ++.++ .|++++.+|.+|
T Consensus 629 Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~i--------------------v~~Ll~~GAdv~~~~~~g 688 (823)
T PLN03192 629 AAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDM--------------------VRLLIMNGADVDKANTDD 688 (823)
T ss_pred HHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH--------------------HHHHHHcCCCCCCCCCCC
Confidence 024466666666666666666444 44444 689999999988
Q ss_pred -CCchhchH
Q 046030 149 -KTPWELFT 156 (331)
Q Consensus 149 -~Tpl~la~ 156 (331)
.||.+++.
T Consensus 689 ~~t~~~l~~ 697 (823)
T PLN03192 689 DFSPTELRE 697 (823)
T ss_pred CCCHHHHHH
Confidence 89998874
No 40
>PHA03095 ankyrin-like protein; Provisional
Probab=99.63 E-value=6.2e-16 Score=150.01 Aligned_cols=144 Identities=19% Similarity=0.198 Sum_probs=109.0
Q ss_pred ecccCCCCCCCCHHHHHHhcC--cHHHHHHHHHhCCCcccccccCCccHHHHHHHc--CCHHHHHHHHhhCCchhhhhhh
Q 046030 16 VSIPDGDAANSPQPLQNAHSG--NFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMH--RHAETFKLIYEIGFSKELIATY 91 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh~Aa~~G--~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~--g~~~iv~~Ll~~~~~~~~~in~ 91 (331)
.+++..|..|.||||+|+..+ +.++++.|++.+++ ++..|..|+||||+|+.. ++.++++.|++.|++++ .
T Consensus 143 ad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~-~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~----~ 217 (471)
T PHA03095 143 ADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGAD-VYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPA----A 217 (471)
T ss_pred CCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCc----c
Confidence 356778888999999888765 67889999998888 555588899999988875 67788899999888754 4
Q ss_pred cccCCCcHHHHHHhhCCCC--CCC-------------CCCCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhch
Q 046030 92 VDKSGNNLLHLAAQYSNPK--PIS-------------KVPGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELF 155 (331)
Q Consensus 92 ~d~~G~TpLHlAa~~g~~~--~~~-------------~l~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la 155 (331)
+|.+|+||||+|+..|+.+ .+. .-...+++.+...+..+.++.++ .|++++.+|.+|+||+++|
T Consensus 218 ~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A 297 (471)
T PHA03095 218 TDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLM 297 (471)
T ss_pred cCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 8889999999998887643 111 11235677776666666777776 5899999999999999999
Q ss_pred HH-hhhhHHH
Q 046030 156 TA-EHKTLLE 164 (331)
Q Consensus 156 ~~-~~~~l~~ 164 (331)
.. ++.++++
T Consensus 298 ~~~~~~~~v~ 307 (471)
T PHA03095 298 VRNNNGRAVR 307 (471)
T ss_pred HHhCCHHHHH
Confidence 54 4555443
No 41
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.62 E-value=1.4e-15 Score=154.24 Aligned_cols=136 Identities=21% Similarity=0.193 Sum_probs=84.6
Q ss_pred ccCCCCCCCCHHHHHHhcC-cHHHHHHHHHhCCCcccccccCCccHHHHHHHc-CCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 18 IPDGDAANSPQPLQNAHSG-NFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMH-RHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G-~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~-g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
++.+|.+|.||||+|+..| +.+.++.|++.+.+ ++..|..|+||||+|+.. ++.+++++|++.|++. |.+|.+
T Consensus 300 in~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gad-in~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadi----n~~d~~ 374 (682)
T PHA02876 300 VNAKNIKGETPLYLMAKNGYDTENIRTLIMLGAD-VNAADRLYITPLHQASTLDRNKDIVITLLELGANV----NARDYC 374 (682)
T ss_pred CCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCC-CCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCC----ccCCCC
Confidence 3445555666666666665 35566666665555 555666666666666653 3456666666666653 457888
Q ss_pred CCcHHHHHHhhCCCCCCCCCC-------------CcHHhhHHhh-hhhhhhhhhc-CcccccccccCCCCchhchHHh
Q 046030 96 GNNLLHLAAQYSNPKPISKVP-------------GAALEMQREL-ITFKEVETIV-KPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~l~-------------~~~l~~~~~l-~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
|+||||+|+..|+.++++.|. +.+++.+... +....++.++ .|++++.+|.+|+||+|+|.+.
T Consensus 375 G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~ 452 (682)
T PHA02876 375 DKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKK 452 (682)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHh
Confidence 888888888888877665441 2334433221 1122344444 5888999999999999999764
No 42
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.62 E-value=4.6e-16 Score=115.98 Aligned_cols=77 Identities=29% Similarity=0.366 Sum_probs=67.9
Q ss_pred HHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCC
Q 046030 29 PLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSN 108 (331)
Q Consensus 29 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~ 108 (331)
||+|++.|+.++++.|++.+++ ++. |+||||+|+.+|+.+++++|++.|++. |.+|.+|+||||+|+.+|+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~-~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~L~~A~~~~~ 71 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGAD-INL----GNTALHYAAENGNLEIVKLLLENGADI----NSQDKNGNTALHYAAENGN 71 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTST-TTS----SSBHHHHHHHTTTHHHHHHHHHTTTCT----T-BSTTSSBHHHHHHHTTH
T ss_pred CHHHHHcCCHHHHHHHHHCcCC-CCC----CCCHHHHHHHcCCHHHHHHHHHhcccc----cccCCCCCCHHHHHHHcCC
Confidence 7999999999999999998877 333 999999999999999999999999885 4499999999999999999
Q ss_pred CCCCCC
Q 046030 109 PKPISK 114 (331)
Q Consensus 109 ~~~~~~ 114 (331)
.+++++
T Consensus 72 ~~~~~~ 77 (89)
T PF12796_consen 72 LEIVKL 77 (89)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665443
No 43
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.62 E-value=7.2e-16 Score=156.23 Aligned_cols=136 Identities=15% Similarity=0.138 Sum_probs=87.7
Q ss_pred cccCCCCCCCCHHHHHHhc-CcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 17 SIPDGDAANSPQPLQNAHS-GNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~-G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
.++..|..|.||||+|+.. ++.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|++.+ ..|.+
T Consensus 333 din~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gad-in~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~----~~~~~ 407 (682)
T PHA02876 333 DVNAADRLYITPLHQASTLDRNKDIVITLLELGAN-VNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE----ALSQK 407 (682)
T ss_pred CCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc----ccCCC
Confidence 3555666677777777764 456666667776666 66677777777777777777777777777776643 36666
Q ss_pred CCcHHHHHHhhCCCC-CCCC-------------CCCcHHhhHHhhh-hhhhhhhhc-CcccccccccCCCCchhchHH
Q 046030 96 GNNLLHLAAQYSNPK-PISK-------------VPGAALEMQRELI-TFKEVETIV-KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 96 G~TpLHlAa~~g~~~-~~~~-------------l~~~~l~~~~~l~-~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 157 (331)
|.||||+|+..++.. ++++ -...+++.+...+ ..+.++.++ .|++++.+|.+|.||+++|.+
T Consensus 408 g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~ 485 (682)
T PHA02876 408 IGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALE 485 (682)
T ss_pred CCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 666666666544421 1111 1223455544332 234455555 599999999999999999865
No 44
>PHA02795 ankyrin-like protein; Provisional
Probab=99.60 E-value=4.8e-16 Score=145.99 Aligned_cols=110 Identities=10% Similarity=-0.022 Sum_probs=67.5
Q ss_pred CCHHHHHHhcCcHHHHHHHHHhCCCccccc-----ccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHH
Q 046030 26 SPQPLQNAHSGNFKFLAVLIRSYPDLVHEL-----DEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLL 100 (331)
Q Consensus 26 ~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~-----d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 100 (331)
.||+|.|+..|+.++++.|++++.+..+.. +..|.+++|.|+.+++.+++++|++.|++ +|.+|.+|+|||
T Consensus 150 ~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GAD----IN~kD~~G~TpL 225 (437)
T PHA02795 150 LNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIED----INQLDAGGRTLL 225 (437)
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCC----cCcCCCCCCCHH
Confidence 455555555555555555555543211111 12244555555555555555555555554 355778888888
Q ss_pred HHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 101 HLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 101 HlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
|+|+..|+.+++++| +..|++++.+|.+|.||+|.|...
T Consensus 226 h~Aa~~g~~eiVelL-------------------L~~GAdIN~~d~~G~TpLh~Aa~~ 264 (437)
T PHA02795 226 YRAIYAGYIDLVSWL-------------------LENGANVNAVMSNGYTCLDVAVDR 264 (437)
T ss_pred HHHHHcCCHHHHHHH-------------------HHCCCCCCCcCCCCCCHHHHHHHc
Confidence 888888776554332 236999999999999999999654
No 45
>PHA02917 ankyrin-like protein; Provisional
Probab=99.60 E-value=2.4e-15 Score=150.42 Aligned_cols=136 Identities=11% Similarity=0.098 Sum_probs=102.4
Q ss_pred ccCCCCCCCCHHHHHHhc---CcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCC-----------------------
Q 046030 18 IPDGDAANSPQPLQNAHS---GNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRH----------------------- 71 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~---G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~----------------------- 71 (331)
++.+|.+|+||||+|+.. |+.++|+.|++.+.+ ++..|..|+||||+|+..|+
T Consensus 25 ~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~-v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~ 103 (661)
T PHA02917 25 NDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTN-PLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDF 103 (661)
T ss_pred ccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCC-ccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc
Confidence 356688999999997555 889999999999998 67889999999999888665
Q ss_pred ------------HHHHHHHHhhCCchhhhhhhcccCCCcHHHHHH--hhCCCCCCCCC--CC------------------
Q 046030 72 ------------AETFKLIYEIGFSKELIATYVDKSGNNLLHLAA--QYSNPKPISKV--PG------------------ 117 (331)
Q Consensus 72 ------------~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa--~~g~~~~~~~l--~~------------------ 117 (331)
.+++++|++.|++ +|.+|.+|+||||.|+ ..|+.+++++| .|
T Consensus 104 ~~~~~~a~~~~~~e~vk~Ll~~Gad----in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~ 179 (661)
T PHA02917 104 NIFSYMKSKNVDVDLIKVLVEHGFD----LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDD 179 (661)
T ss_pred chHHHHHhhcCCHHHHHHHHHcCCC----CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccc
Confidence 3444455555555 4669999999999654 56788887765 12
Q ss_pred -------cHHhhHHh-----------hhhhhhhhhhc-CcccccccccCCCCchhchHHh
Q 046030 118 -------AALEMQRE-----------LITFKEVETIV-KPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 118 -------~~l~~~~~-----------l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
.+++.+.. ....+.++.++ .|++++.+|++|.||+|+|.+.
T Consensus 180 ~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~ 239 (661)
T PHA02917 180 YQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKS 239 (661)
T ss_pred ccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHc
Confidence 33443321 12346677777 6999999999999999999764
No 46
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.59 E-value=2.4e-15 Score=146.92 Aligned_cols=77 Identities=13% Similarity=0.157 Sum_probs=42.1
Q ss_pred CCCHHHHHHh------cCcHHHHHHHHHhCCCcccccccCCccHHHHHHHc---CCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 25 NSPQPLQNAH------SGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMH---RHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 25 g~t~Lh~Aa~------~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~---g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
+.||||.|+. .|+.++++.|+++|++ ++.+|..|+||||.|+.. ++.+++++|++.|++.+ +.+|.+
T Consensus 69 ~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin---~~~d~~ 144 (494)
T PHA02989 69 IETPLCAVLRNREITSNKIKKIVKLLLKFGAD-INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVN---DVKNSR 144 (494)
T ss_pred CCCcHHHHHhccCcchhhHHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcc---cccCCC
Confidence 4566665543 3555566666666655 555555666666655443 34556666666655531 225555
Q ss_pred CCcHHHHHHh
Q 046030 96 GNNLLHLAAQ 105 (331)
Q Consensus 96 G~TpLHlAa~ 105 (331)
|+||||+|+.
T Consensus 145 g~tpLh~a~~ 154 (494)
T PHA02989 145 GYNLLHMYLE 154 (494)
T ss_pred CCCHHHHHHH
Confidence 6666665543
No 47
>PHA02798 ankyrin-like protein; Provisional
Probab=99.58 E-value=3.6e-15 Score=145.48 Aligned_cols=129 Identities=11% Similarity=0.053 Sum_probs=92.8
Q ss_pred CCCCHHHHHH--hcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHc-----CCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 24 ANSPQPLQNA--HSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMH-----RHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 24 ~g~t~Lh~Aa--~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~-----g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.|.|+++.+. ..++.++|+.|+++|++ ++.+|..|.||||.|+.+ ++.+++++|++.|++. |.+|.+|
T Consensus 35 ~~~~~~~~yl~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gadi----N~~d~~G 109 (489)
T PHA02798 35 NEYSIFQKYLQRDSPSTDIVKLFINLGAN-VNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADI----NKKNSDG 109 (489)
T ss_pred ccchHHHHHHhCCCCCHHHHHHHHHCCCC-CCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCC----CCCCCCc
Confidence 4667766444 45589999999999999 889999999999999865 6689999999999984 5699999
Q ss_pred CcHHHHHHhhCC---CCCCCCC-------------CCcHHhhHHhhhh---hhhhhhhc-Ccccccccc-cCCCCchhch
Q 046030 97 NNLLHLAAQYSN---PKPISKV-------------PGAALEMQRELIT---FKEVETIV-KPSFKEMKN-NDGKTPWELF 155 (331)
Q Consensus 97 ~TpLHlAa~~g~---~~~~~~l-------------~~~~l~~~~~l~~---~~~v~~l~-~~~~~~~~n-~~G~Tpl~la 155 (331)
+||||+|+..+. .+++++| ...+++....... .+.++.++ .|++++.+| ..|.||+|.+
T Consensus 110 ~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~ 189 (489)
T PHA02798 110 ETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCY 189 (489)
T ss_pred CcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHH
Confidence 999999998764 4444433 1133444333332 45555555 366776664 4677777766
Q ss_pred HH
Q 046030 156 TA 157 (331)
Q Consensus 156 ~~ 157 (331)
..
T Consensus 190 ~~ 191 (489)
T PHA02798 190 FK 191 (489)
T ss_pred HH
Confidence 43
No 48
>PHA02741 hypothetical protein; Provisional
Probab=99.58 E-value=3.3e-15 Score=125.13 Aligned_cols=95 Identities=14% Similarity=0.174 Sum_probs=82.6
Q ss_pred ecccCCCCCCCCHHHHHHhcCc----HHHHHHHHHhCCCccccccc-CCccHHHHHHHcCCHHHHHHHHh-hCCchhhhh
Q 046030 16 VSIPDGDAANSPQPLQNAHSGN----FKFLAVLIRSYPDLVHELDE-EDRSIFHIAVMHRHAETFKLIYE-IGFSKELIA 89 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh~Aa~~G~----~~~v~~Ll~~~~~~~~~~d~-~G~t~LH~Aa~~g~~~iv~~Ll~-~~~~~~~~i 89 (331)
..++.+|..|.||||+|+..|+ .++++.|++.+++ ++.+|. +|+||||+|+..++.+++++|++ .+.+.
T Consensus 51 a~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad-in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~---- 125 (169)
T PHA02741 51 AALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD-INAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDL---- 125 (169)
T ss_pred hhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC-CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC----
Confidence 3467888999999999999999 5889999999998 788885 89999999999999999999997 47764
Q ss_pred hhcccCCCcHHHHHHhhCCCCCCCCC
Q 046030 90 TYVDKSGNNLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 90 n~~d~~G~TpLHlAa~~g~~~~~~~l 115 (331)
+.+|.+|.||||+|...++.+++++|
T Consensus 126 ~~~n~~g~tpL~~A~~~~~~~iv~~L 151 (169)
T PHA02741 126 HFCNADNKSPFELAIDNEDVAMMQIL 151 (169)
T ss_pred CcCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 44899999999999999987765543
No 49
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.57 E-value=4.2e-15 Score=151.69 Aligned_cols=116 Identities=19% Similarity=0.215 Sum_probs=97.9
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++.++..|+||||.|+..|+.++|+.|++++.| ++.+|+.|+||||.||..|+.+|+++|+++|+++ |+.|.+|.
T Consensus 533 v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAd-v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~v----na~d~~g~ 607 (1143)
T KOG4177|consen 533 VDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGAD-VNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASV----NAADLDGF 607 (1143)
T ss_pred eehhcccccchHHHHHhcCCchHHHHhhhCCcc-ccccCCCCCChhhHHHHcChHHHHHHHHHcCCCC----CcccccCc
Confidence 445667789999999999999999999999999 7888999999999999999999999999999985 55999999
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCccc-----ccccccCCCCchhchHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSF-----KEMKNNDGKTPWELFTA 157 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~-----~~~~n~~G~Tpl~la~~ 157 (331)
||||.|++.|+.++++.+ +..+.. ....|..|.+|.++..+
T Consensus 608 TpL~iA~~lg~~~~~k~l-------------------~~~~~~~~~~~~~~e~~~g~~p~~v~e~ 653 (1143)
T KOG4177|consen 608 TPLHIAVRLGYLSVVKLL-------------------KVVTATPAATDPVKENRKGAVPEDVAEE 653 (1143)
T ss_pred chhHHHHHhcccchhhHH-------------------HhccCccccccchhhhhcccChhhHHHH
Confidence 999999999998877654 122222 56778889999988744
No 50
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.56 E-value=2.7e-15 Score=137.55 Aligned_cols=124 Identities=15% Similarity=0.216 Sum_probs=109.1
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcH
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNL 99 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 99 (331)
...-+|-+||..|+..||.++|+.|++++++ +|.......|||--||.-|+.++|++|+++|+++++ .|..|+|.
T Consensus 79 ge~IegappLWaAsaAGHl~vVk~L~~~ga~-VN~tT~TNStPLraACfDG~leivKyLvE~gad~~I----anrhGhTc 153 (615)
T KOG0508|consen 79 GETIEGAPPLWAASAAGHLEVVKLLLRRGAS-VNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEI----ANRHGHTC 153 (615)
T ss_pred CcccCCCchhhHHhccCcHHHHHHHHHhcCc-cccccccCCccHHHHHhcchhHHHHHHHHcCCCCcc----cccCCCee
Confidence 4445789999999999999999999999987 788888888999999999999999999999999776 99999999
Q ss_pred HHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHHHHH
Q 046030 100 LHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLEEAE 167 (331)
Q Consensus 100 LHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~~~~ 167 (331)
||+||..|+.+++++| +..|+++|.++..|+|+||.+.+ +|.++++...
T Consensus 154 LmIa~ykGh~~I~qyL-------------------le~gADvn~ks~kGNTALH~caEsG~vdivq~Ll 203 (615)
T KOG0508|consen 154 LMIACYKGHVDIAQYL-------------------LEQGADVNAKSYKGNTALHDCAESGSVDIVQLLL 203 (615)
T ss_pred EEeeeccCchHHHHHH-------------------HHhCCCcchhcccCchHHHhhhhcccHHHHHHHH
Confidence 9999999998876654 44699999999999999999854 5777766543
No 51
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.55 E-value=1.4e-14 Score=113.44 Aligned_cols=114 Identities=27% Similarity=0.399 Sum_probs=97.4
Q ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHH
Q 046030 21 GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLL 100 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 100 (331)
.|.+|.||||.|+..|+.++++.|++.+++ .+..|..|.+|+|+|+..++.+++++|++.+... +..|..|.||+
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~-~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~----~~~~~~~~~~l 77 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADV----NARDKDGNTPL 77 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc----cccCCCCCCHH
Confidence 457799999999999999999999999988 5788999999999999999999999999998753 44789999999
Q ss_pred HHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 101 HLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 101 HlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
|+|+..++.++++.| +..+.+.+..|..|+||++.+...
T Consensus 78 ~~a~~~~~~~~~~~L-------------------~~~~~~~~~~~~~~~~~l~~~~~~ 116 (126)
T cd00204 78 HLAARNGNLDVVKLL-------------------LKHGADVNARDKDGRTPLHLAAKN 116 (126)
T ss_pred HHHHHcCcHHHHHHH-------------------HHcCCCCcccCCCCCCHHHHHHhc
Confidence 999999986654332 123566788899999999999654
No 52
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.54 E-value=2.6e-15 Score=123.77 Aligned_cols=91 Identities=12% Similarity=0.081 Sum_probs=78.6
Q ss_pred cCCCCCCCCHHHHHHhcCcH---HHHHHHHHhCCCcccccc-cCCccHHHHHHHcCCHHHHHHHHhh-CCchhhhhhhcc
Q 046030 19 PDGDAANSPQPLQNAHSGNF---KFLAVLIRSYPDLVHELD-EEDRSIFHIAVMHRHAETFKLIYEI-GFSKELIATYVD 93 (331)
Q Consensus 19 ~~~d~~g~t~Lh~Aa~~G~~---~~v~~Ll~~~~~~~~~~d-~~G~t~LH~Aa~~g~~~iv~~Ll~~-~~~~~~~in~~d 93 (331)
+..|.+|.||||+|+..|+. ++++.|++.+.+ ++.+| ..|+||||+|+..++.+++++|++. +.+. |.+|
T Consensus 49 ~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad-in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~----n~~~ 123 (154)
T PHA02736 49 LEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD-INGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNM----EILN 123 (154)
T ss_pred HHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCC-ccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC----cccc
Confidence 34578999999999999987 468899999998 77887 5899999999999999999999974 7764 5599
Q ss_pred cCCCcHHHHHHhhCCCCCCCC
Q 046030 94 KSGNNLLHLAAQYSNPKPISK 114 (331)
Q Consensus 94 ~~G~TpLHlAa~~g~~~~~~~ 114 (331)
..|.||||+|+..|+.+++++
T Consensus 124 ~~g~tpL~~A~~~~~~~i~~~ 144 (154)
T PHA02736 124 YAFKTPYYVACERHDAKMMNI 144 (154)
T ss_pred CCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999998776544
No 53
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.53 E-value=9.1e-15 Score=149.53 Aligned_cols=128 Identities=20% Similarity=0.148 Sum_probs=92.5
Q ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccc--------------cCCccHHHHHHHcCCHHHHHHHHhhCCchhh
Q 046030 22 DAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELD--------------EEDRSIFHIAVMHRHAETFKLIYEIGFSKEL 87 (331)
Q Consensus 22 d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d--------------~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~ 87 (331)
+..|.||||.||.+|+.++|+.|++++++ ++.++ ..|+||||+|+..|+.+++++|++.|++.
T Consensus 125 ~~~G~TpLhlAa~~~~~eiVklLL~~GAd-v~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadi-- 201 (743)
T TIGR00870 125 FTPGITALHLAAHRQNYEIVKLLLERGAS-VPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI-- 201 (743)
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHhCCCC-CCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcch--
Confidence 35699999999999999999999999988 44332 36999999999999999999999999874
Q ss_pred hhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhh-hhhcCcccc----cccccCCCCchhchHHh-hhh
Q 046030 88 IATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEV-ETIVKPSFK----EMKNNDGKTPWELFTAE-HKT 161 (331)
Q Consensus 88 ~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v-~~l~~~~~~----~~~n~~G~Tpl~la~~~-~~~ 161 (331)
|.+|..|+||||+|+..+..... ...+. .+-.+.+ +.+....+. +.+|++|.||+|+|.+. +.+
T Consensus 202 --n~~d~~g~T~Lh~A~~~~~~~~~------~~~l~--~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~ 271 (743)
T TIGR00870 202 --LTADSLGNTLLHLLVMENEFKAE------YEELS--CQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIV 271 (743)
T ss_pred --hhHhhhhhHHHHHHHhhhhhhHH------HHHHH--HHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCcc
Confidence 66999999999999998742210 00000 0001111 111222333 67899999999999653 344
Q ss_pred H
Q 046030 162 L 162 (331)
Q Consensus 162 l 162 (331)
+
T Consensus 272 l 272 (743)
T TIGR00870 272 L 272 (743)
T ss_pred H
Confidence 3
No 54
>PHA02730 ankyrin-like protein; Provisional
Probab=99.52 E-value=4e-14 Score=139.24 Aligned_cols=124 Identities=8% Similarity=-0.008 Sum_probs=98.1
Q ss_pred cc-CCCCCCCCHHHHHHhcC---cHHHHHHHHHhCCCcccccccCCccHHHHHHHcC--CHHHHHHHHhhCCchhhhhhh
Q 046030 18 IP-DGDAANSPQPLQNAHSG---NFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHR--HAETFKLIYEIGFSKELIATY 91 (331)
Q Consensus 18 l~-~~d~~g~t~Lh~Aa~~G---~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g--~~~iv~~Ll~~~~~~~~~in~ 91 (331)
++ .+|.+|+||||+|+..| +.|+|+.|+++|++ ++.+|..|+||||+|+..+ +.+++++|++.|++.+. +.
T Consensus 33 in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAd-in~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~--~~ 109 (672)
T PHA02730 33 LSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVE-RLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASN--EL 109 (672)
T ss_pred hhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCC-CcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCc--cc
Confidence 45 77889999999999997 59999999999999 8899999999999999977 79999999999876543 55
Q ss_pred cccCCCcHHHHHHh--hCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc--Ccccccccc-----cCCCCchhchHHh-hhh
Q 046030 92 VDKSGNNLLHLAAQ--YSNPKPISKVPGAALEMQRELITFKEVETIV--KPSFKEMKN-----NDGKTPWELFTAE-HKT 161 (331)
Q Consensus 92 ~d~~G~TpLHlAa~--~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~--~~~~~~~~n-----~~G~Tpl~la~~~-~~~ 161 (331)
.|+.+++|||.++. +++.+ .++.++ .+.+++..+ ..|.+|+.++++. +.|
T Consensus 110 ~~~~~d~~l~~y~~s~n~~~~--------------------~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~e 169 (672)
T PHA02730 110 TSNINDFDLYSYMSSDNIDLR--------------------LLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPE 169 (672)
T ss_pred ccccCCchHHHHHHhcCCcHH--------------------HHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchH
Confidence 88889999999998 44433 355555 345655443 2788999998553 445
Q ss_pred HHH
Q 046030 162 LLE 164 (331)
Q Consensus 162 l~~ 164 (331)
+++
T Consensus 170 Ivk 172 (672)
T PHA02730 170 VLL 172 (672)
T ss_pred HHH
Confidence 544
No 55
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.52 E-value=3.2e-14 Score=128.60 Aligned_cols=86 Identities=16% Similarity=0.163 Sum_probs=77.5
Q ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHhCCCccccc-ccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHH
Q 046030 22 DAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHEL-DEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLL 100 (331)
Q Consensus 22 d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~-d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 100 (331)
|..|.||||+|+..|+.++++.|++++++ ++.+ +..|.||||+|+..++.+++++|++.|++. |.+|.+|.|||
T Consensus 67 d~~g~TpLh~Aa~~~~~eivklLL~~GAD-VN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdi----n~kd~~G~TpL 141 (300)
T PHA02884 67 ENSKTNPLIYAIDCDNDDAAKLLIRYGAD-VNRYAEEAKITPLYISVLHGCLKCLEILLSYGADI----NIQTNDMVTPI 141 (300)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-cCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC----CCCCCCCCCHH
Confidence 45899999999999999999999999999 7775 568999999999999999999999999985 44999999999
Q ss_pred HHHHhhCCCCCC
Q 046030 101 HLAAQYSNPKPI 112 (331)
Q Consensus 101 HlAa~~g~~~~~ 112 (331)
|+|+..++.+++
T Consensus 142 ~~A~~~~~~~~~ 153 (300)
T PHA02884 142 ELALMICNNFLA 153 (300)
T ss_pred HHHHHhCChhHH
Confidence 999998876643
No 56
>PHA02730 ankyrin-like protein; Provisional
Probab=99.51 E-value=2.5e-14 Score=140.66 Aligned_cols=123 Identities=9% Similarity=0.090 Sum_probs=96.4
Q ss_pred ccCCCCCCCCHHHHHHhcCc----HHHHHHHHHhCCC-cccccccCCccHHHH---HHHcC---------CHHHHHHHHh
Q 046030 18 IPDGDAANSPQPLQNAHSGN----FKFLAVLIRSYPD-LVHELDEEDRSIFHI---AVMHR---------HAETFKLIYE 80 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~----~~~v~~Ll~~~~~-~~~~~d~~G~t~LH~---Aa~~g---------~~~iv~~Ll~ 80 (331)
++.. .+|.||||+|+..++ .++++.|++++++ .++.+|..|+||||. |...+ ..+++++|++
T Consensus 372 IN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs 450 (672)
T PHA02730 372 MDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSK 450 (672)
T ss_pred CCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHh
Confidence 4443 689999999998875 8999999999873 378889999999994 33332 2357999999
Q ss_pred hCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCccccccccc-CCCCchhchHH--
Q 046030 81 IGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNN-DGKTPWELFTA-- 157 (331)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~-~G~Tpl~la~~-- 157 (331)
.|++ +|++|..|+||||+|+..++.+++++| +..|++++.+|+ .|.||++.|..
T Consensus 451 ~GAD----INakD~~G~TPLh~Aa~~~~~eive~L-------------------I~~GAdIN~~d~~~g~TaL~~Aa~~~ 507 (672)
T PHA02730 451 YMDD----IDMIDNENKTLLYYAVDVNNIQFARRL-------------------LEYGASVNTTSRSIINTAIQKSSYRR 507 (672)
T ss_pred cccc----hhccCCCCCCHHHHHHHhCCHHHHHHH-------------------HHCCCCCCCCCCcCCcCHHHHHHHhh
Confidence 9998 466999999999999999986654332 346999999997 59999999965
Q ss_pred -hhhhHHH
Q 046030 158 -EHKTLLE 164 (331)
Q Consensus 158 -~~~~l~~ 164 (331)
++.++++
T Consensus 508 ~~~~eIv~ 515 (672)
T PHA02730 508 ENKTKLVD 515 (672)
T ss_pred cCcHHHHH
Confidence 3445544
No 57
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.50 E-value=1.7e-14 Score=147.41 Aligned_cols=110 Identities=20% Similarity=0.184 Sum_probs=87.8
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHH
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLA 103 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlA 103 (331)
.|-+++|.|+..++...++.+++++.+ ++.++.+|.||||+||.+|+.++|++|+++|++. |++|+.|.||||.|
T Consensus 506 ~~l~~lhla~~~~~v~~~~~l~~~ga~-v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv----~ak~~~G~TPLH~A 580 (1143)
T KOG4177|consen 506 KGLTPLHLAADEDTVKVAKILLEHGAN-VDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADV----NAKDKLGYTPLHQA 580 (1143)
T ss_pred hccchhhhhhhhhhHHHHHHHhhcCCc-eehhcccccchHHHHHhcCCchHHHHhhhCCccc----cccCCCCCChhhHH
Confidence 344555555555555555555555555 6778888999999999999999999999999984 56999999999999
Q ss_pred HhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 104 AQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 104 a~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
|..|+.+++.+| +-+|+++|..|.+|.||+++|.+
T Consensus 581 a~~G~~~i~~LL-------------------lk~GA~vna~d~~g~TpL~iA~~ 615 (1143)
T KOG4177|consen 581 AQQGHNDIAELL-------------------LKHGASVNAADLDGFTPLHIAVR 615 (1143)
T ss_pred HHcChHHHHHHH-------------------HHcCCCCCcccccCcchhHHHHH
Confidence 999987765443 33799999999999999999955
No 58
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.46 E-value=1.9e-14 Score=138.61 Aligned_cols=118 Identities=18% Similarity=0.091 Sum_probs=105.0
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++.+|.+|.|+||.|+.+|+.++++.|+++.+- .+..|.+|.+|||+|+.+|+.++++.++..+.. .|..+.+|
T Consensus 41 s~n~qd~~gfTalhha~Lng~~~is~llle~ea~-ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~----~na~~~e~ 115 (854)
T KOG0507|consen 41 SHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEAL-LDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDI----LNAVNIEN 115 (854)
T ss_pred cccccCccchhHHHHHHhcCchHHHHHHhcchhh-hhhhhccCcceEEehhhcCcchHHHHHHhcccC----CCcccccC
Confidence 3567888999999999999999999999998887 788999999999999999999999999998833 47799999
Q ss_pred CcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 97 NNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
.||||+|+..||.+.+.+| +-.+++..++|+.++|++|+|++-
T Consensus 116 ~tplhlaaqhgh~dvv~~L-------------------l~~~adp~i~nns~~t~ldlA~qf 158 (854)
T KOG0507|consen 116 ETPLHLAAQHGHLEVVFYL-------------------LKKNADPFIRNNSKETVLDLASRF 158 (854)
T ss_pred cCccchhhhhcchHHHHHH-------------------HhcCCCccccCcccccHHHHHHHh
Confidence 9999999999998875544 346889999999999999999763
No 59
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.46 E-value=8.2e-14 Score=129.92 Aligned_cols=138 Identities=15% Similarity=0.124 Sum_probs=90.3
Q ss_pred cCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhh-----------
Q 046030 19 PDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKEL----------- 87 (331)
Q Consensus 19 ~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~----------- 87 (331)
+..+.+|.|+||.+|...+.++|++|++.+++ ++..|..||||||.|+..|+..++++++..|++...
T Consensus 67 ~~~n~DglTalhq~~id~~~e~v~~l~e~ga~-Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl 145 (527)
T KOG0505|consen 67 NLCNVDGLTALHQACIDDNLEMVKFLVENGAN-VNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDL 145 (527)
T ss_pred cccCCccchhHHHHHhcccHHHHHHHHHhcCC-ccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCcccc
Confidence 55667788888888888888888888888887 778888888888888888888888888877664211
Q ss_pred --------------------------------------------hhhhcccCCCcHHHHHHhhCCCCCCCCCCC------
Q 046030 88 --------------------------------------------IATYVDKSGNNLLHLAAQYSNPKPISKVPG------ 117 (331)
Q Consensus 88 --------------------------------------------~in~~d~~G~TpLHlAa~~g~~~~~~~l~~------ 117 (331)
..+..+..|-|.||.|+.+|..+...+|..
T Consensus 146 ~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~ 225 (527)
T KOG0505|consen 146 AEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVN 225 (527)
T ss_pred ccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcc
Confidence 012344446666666666666554443311
Q ss_pred -------cHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH
Q 046030 118 -------AALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 118 -------~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 157 (331)
.++|-+.--...+..+.++ ++++.+.+++.|+||++++.+
T Consensus 226 ~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 226 IKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE 273 (527)
T ss_pred cccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence 1122111111122233343 688999999999999999955
No 60
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.44 E-value=4.8e-12 Score=123.55 Aligned_cols=111 Identities=18% Similarity=0.193 Sum_probs=88.6
Q ss_pred CCCCCHHHHHHhcCcHHHHHHHHHhCCCccccc---------c--------------cCCccHHHHHHHcCCHHHHHHHH
Q 046030 23 AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHEL---------D--------------EEDRSIFHIAVMHRHAETFKLIY 79 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~---------d--------------~~G~t~LH~Aa~~g~~~iv~~Ll 79 (331)
..|.||||+|+.+.+.++|+.|++.++| ++.+ | .-|+.||-+||..++++++++|+
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~~gAD-V~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl 260 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLAAGAD-VHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL 260 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHHcCCc-hhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence 4699999999999999999999999988 3221 1 13789999999999999999999
Q ss_pred hhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCccc--ccccccCCCCchhchHH
Q 046030 80 EIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSF--KEMKNNDGKTPWELFTA 157 (331)
Q Consensus 80 ~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~--~~~~n~~G~Tpl~la~~ 157 (331)
++|+|+ |++|.+|||.||..+.+-..+..+. .+..+++ ...+|++|.|||.+|++
T Consensus 261 ~~gAd~----~aqDS~GNTVLH~lVi~~~~~My~~-------------------~L~~ga~~l~~v~N~qgLTPLtLAak 317 (782)
T KOG3676|consen 261 AHGADP----NAQDSNGNTVLHMLVIHFVTEMYDL-------------------ALELGANALEHVRNNQGLTPLTLAAK 317 (782)
T ss_pred hcCCCC----CccccCCChHHHHHHHHHHHHHHHH-------------------HHhcCCCccccccccCCCChHHHHHH
Confidence 999995 5599999999999988733221111 1234555 78899999999999854
No 61
>PHA02917 ankyrin-like protein; Provisional
Probab=99.43 E-value=4.2e-13 Score=134.37 Aligned_cols=127 Identities=13% Similarity=0.074 Sum_probs=91.2
Q ss_pred cCCceeEEEe------cccCCCCCCCCHHHHH--HhcCcHHHHHHHHHhCCCccccccc---CC-----------ccHHH
Q 046030 7 NGGKTYQVRV------SIPDGDAANSPQPLQN--AHSGNFKFLAVLIRSYPDLVHELDE---ED-----------RSIFH 64 (331)
Q Consensus 7 ~~g~~~~~~~------~l~~~d~~g~t~Lh~A--a~~G~~~~v~~Ll~~~~~~~~~~d~---~G-----------~t~LH 64 (331)
.+|+.+.++. +++.+|.+|+||||.| +..|+.|+++.|++++++ ++..|. .| .||||
T Consensus 112 ~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~-vn~~d~~~~~g~~~~~~~~~~~~t~L~ 190 (661)
T PHA02917 112 KNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCS-VLYEDEDDEYGYAYDDYQPRNCGTVLH 190 (661)
T ss_pred hcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCC-ccccccccccccccccccccccccHHH
Confidence 3445555543 3566788899999854 357899999999999988 544432 34 59999
Q ss_pred HHHH-----------cCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhh
Q 046030 65 IAVM-----------HRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVE 133 (331)
Q Consensus 65 ~Aa~-----------~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~ 133 (331)
+|+. +++.+++++|++.|++. |.+|.+|+||||+|+..|+.+ .+.++
T Consensus 191 ~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadv----n~~d~~G~TpLh~A~~~g~~~------------------~eivk 248 (661)
T PHA02917 191 LYIISHLYSESDTRAYVRPEVVKCLINHGIKP----SSIDKNYCTALQYYIKSSHID------------------IDIVK 248 (661)
T ss_pred HHHhhcccccccccccCcHHHHHHHHHCCCCc----ccCCCCCCcHHHHHHHcCCCc------------------HHHHH
Confidence 9986 46889999999999884 558999999999999999864 12244
Q ss_pred hhcCccccc----ccccCCCCchhchH
Q 046030 134 TIVKPSFKE----MKNNDGKTPWELFT 156 (331)
Q Consensus 134 ~l~~~~~~~----~~n~~G~Tpl~la~ 156 (331)
.+..|++.+ ..|..|.+|++++.
T Consensus 249 ~Li~g~d~~~~~~~~~~~~~~~~~~a~ 275 (661)
T PHA02917 249 LLMKGIDNTAYSYIDDLTCCTRGIMAD 275 (661)
T ss_pred HHHhCCcccccccccCcccccchHHHH
Confidence 455565543 45566777777775
No 62
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.43 E-value=1.2e-13 Score=93.60 Aligned_cols=56 Identities=29% Similarity=0.372 Sum_probs=31.5
Q ss_pred HHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHH
Q 046030 44 LIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLA 103 (331)
Q Consensus 44 Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlA 103 (331)
|+++++..++.+|..|+||||+|+.+|+.+++++|++.|++.+ .+|.+|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~----~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPN----AKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT-------TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCC----CCcCCCCCHHHhC
Confidence 5667755588999999999999999999999999998888854 4999999999987
No 63
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.43 E-value=3.1e-13 Score=90.82 Aligned_cols=54 Identities=22% Similarity=0.375 Sum_probs=44.6
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHH
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIY 79 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll 79 (331)
|.||||+|+..|+.++++.|++++.+ ++.+|.+|+||||+|+.+|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~d-in~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGAD-INAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSG-TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 68999999999999999999999988 7888999999999999999999999885
No 64
>PHA02795 ankyrin-like protein; Provisional
Probab=99.41 E-value=1.7e-13 Score=128.95 Aligned_cols=81 Identities=15% Similarity=0.180 Sum_probs=75.8
Q ss_pred CCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHH
Q 046030 23 AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHL 102 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHl 102 (331)
..+.+++|.|+..++.|+++.|++++++ ++.+|..|+||||+|+.+|+.+++++|++.|++. |.+|.+|+||||+
T Consensus 186 ~~~~t~l~~a~~~~~~eIve~LIs~GAD-IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdI----N~~d~~G~TpLh~ 260 (437)
T PHA02795 186 IIQYTRGFLVDEPTVLEIYKLCIPYIED-INQLDAGGRTLLYRAIYAGYIDLVSWLLENGANV----NAVMSNGYTCLDV 260 (437)
T ss_pred hhccchhHHHHhcCHHHHHHHHHhCcCC-cCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC----CCcCCCCCCHHHH
Confidence 3477899999999999999999999999 8999999999999999999999999999999985 5599999999999
Q ss_pred HHhhCC
Q 046030 103 AAQYSN 108 (331)
Q Consensus 103 Aa~~g~ 108 (331)
|+..|+
T Consensus 261 Aa~~g~ 266 (437)
T PHA02795 261 AVDRGS 266 (437)
T ss_pred HHHcCC
Confidence 999985
No 65
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.40 E-value=1.2e-13 Score=141.22 Aligned_cols=138 Identities=17% Similarity=0.113 Sum_probs=79.5
Q ss_pred ecccCCCCCCCCHHH-HHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCC---HHHHHHHHhhCCchh---hh
Q 046030 16 VSIPDGDAANSPQPL-QNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRH---AETFKLIYEIGFSKE---LI 88 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh-~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~---~~iv~~Ll~~~~~~~---~~ 88 (331)
..+|..|..|+|||| .|+.+++.++++.|++.+. .|..|.||||.|+.+++ ..+++.+...+.+.+ ..
T Consensus 43 ~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~ 117 (743)
T TIGR00870 43 LNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELA 117 (743)
T ss_pred cCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhh
Confidence 456667788999999 7888888888888887764 44556666666555221 122222222221100 00
Q ss_pred ---hhhcccCCCcHHHHHHhhCCCCCCCCCC--C-------------------------cHHhhHHhhhhhhhhhhhc-C
Q 046030 89 ---ATYVDKSGNNLLHLAAQYSNPKPISKVP--G-------------------------AALEMQRELITFKEVETIV-K 137 (331)
Q Consensus 89 ---in~~d~~G~TpLHlAa~~g~~~~~~~l~--~-------------------------~~l~~~~~l~~~~~v~~l~-~ 137 (331)
.+..+..|.||||+|+.+|+.+++++|. | .+++.+...+..+.++.++ +
T Consensus 118 ~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ 197 (743)
T TIGR00870 118 NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED 197 (743)
T ss_pred ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC
Confidence 0112345666666666666655554431 1 1222233333334455555 5
Q ss_pred cccccccccCCCCchhchHHh
Q 046030 138 PSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 138 ~~~~~~~n~~G~Tpl~la~~~ 158 (331)
|++++.+|+.|+||+|+|..+
T Consensus 198 gadin~~d~~g~T~Lh~A~~~ 218 (743)
T TIGR00870 198 PADILTADSLGNTLLHLLVME 218 (743)
T ss_pred CcchhhHhhhhhHHHHHHHhh
Confidence 889999999999999999654
No 66
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.37 E-value=2e-12 Score=111.69 Aligned_cols=118 Identities=22% Similarity=0.277 Sum_probs=101.1
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCC-----HHHHHHHHhhCC--chhhhhh
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRH-----AETFKLIYEIGF--SKELIAT 90 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~-----~~iv~~Ll~~~~--~~~~~in 90 (331)
....+..+.+++|.++..+..+.++.++..+.+ ++.+|..|.||||+|+.+++ .+++++|++.|+ +. .+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~---~~ 141 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGAD-VNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDV---NN 141 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCC-cccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCC---cc
Confidence 344556689999999999999999999999999 59999999999999999999 999999999998 32 24
Q ss_pred hcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 91 YVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 91 ~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
.+|.+|+||||+|+..|+.+++.++ +..+++.+.+|..|.||++.+...
T Consensus 142 ~~~~~g~tpl~~A~~~~~~~~~~~l-------------------l~~~~~~~~~~~~g~t~l~~a~~~ 190 (235)
T COG0666 142 LRDEDGNTPLHWAALNGDADIVELL-------------------LEAGADPNSRNSYGVTALDPAAKN 190 (235)
T ss_pred ccCCCCCchhHHHHHcCchHHHHHH-------------------HhcCCCCcccccCCCcchhhhccc
Confidence 5799999999999999997654332 335888899999999999999543
No 67
>PHA02792 ankyrin-like protein; Provisional
Probab=99.37 E-value=5e-13 Score=130.35 Aligned_cols=127 Identities=11% Similarity=0.126 Sum_probs=98.7
Q ss_pred cCCCCCCCCHHHH-HHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHH-cCCHHHHHHHHhhCCchhh---------
Q 046030 19 PDGDAANSPQPLQ-NAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVM-HRHAETFKLIYEIGFSKEL--------- 87 (331)
Q Consensus 19 ~~~d~~g~t~Lh~-Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~-~g~~~iv~~Ll~~~~~~~~--------- 87 (331)
+..+-+|.+++|+ |+.+|+.|+|++|++++++ ++.+|..|++|+|+|+. +++.|++++|++.|++...
T Consensus 65 ~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAd-vN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~ 143 (631)
T PHA02792 65 DYKNINDFDIFEYLCSDNIDIELLKLLISKGLE-INSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKII 143 (631)
T ss_pred CcCccCCccHHHHHHHhcccHHHHHHHHHcCCC-cccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchh
Confidence 3456678889986 6678999999999999999 88889899999999976 6999999999999986321
Q ss_pred -----------------------hhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-Ccccccc
Q 046030 88 -----------------------IATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV-KPSFKEM 143 (331)
Q Consensus 88 -----------------------~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~~~ 143 (331)
.+|.+|..|+||||+|+.++..+-. + -..+.++.++ +|++++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~------~-------~~~~v~k~Li~~g~~~~~ 210 (631)
T PHA02792 144 IEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGY------A-------TSLDVINYLISHEKEMRY 210 (631)
T ss_pred hhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccc------c-------CCHHHHHHHHhCCCCcCc
Confidence 2577888999999999998821100 0 0012234444 7889999
Q ss_pred cccCCCCchhchHHhh
Q 046030 144 KNNDGKTPWELFTAEH 159 (331)
Q Consensus 144 ~n~~G~Tpl~la~~~~ 159 (331)
+|+.|.||+|.|....
T Consensus 211 ~d~~g~t~l~~~~~~~ 226 (631)
T PHA02792 211 YTYREHTTLYYYVDKC 226 (631)
T ss_pred cCCCCChHHHHHHHcc
Confidence 9999999999996543
No 68
>PHA02792 ankyrin-like protein; Provisional
Probab=99.37 E-value=1.4e-12 Score=127.35 Aligned_cols=109 Identities=13% Similarity=0.066 Sum_probs=91.5
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCC--ccHHHHHHHcCCHH---HHHHHHhhCCchhhhhhhcccCCCcH
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEED--RSIFHIAVMHRHAE---TFKLIYEIGFSKELIATYVDKSGNNL 99 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G--~t~LH~Aa~~g~~~---iv~~Ll~~~~~~~~~in~~d~~G~Tp 99 (331)
...++|.||..|+.++++.|+++|++ ++.+|.+| .||||+|+.....+ +++++++.|++. |.+|.+|+||
T Consensus 339 ~~n~~~~Aa~~gn~eIVelLIs~GAD-IN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADI----N~kD~~G~TP 413 (631)
T PHA02792 339 HINKYFQKFDNRDPKVVEYILKNGNV-VVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDI----NKIDKHGRSI 413 (631)
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCc-hhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCcc----ccccccCcch
Confidence 45679999999999999999999999 77888775 69999988776543 578889999884 6699999999
Q ss_pred HHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 100 LHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 100 LHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
||+|+..++.+++++| +..|++++.+|..|+||+++|..
T Consensus 414 Lh~Aa~~~n~eivelL-------------------Ls~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 414 LYYCIESHSVSLVEWL-------------------IDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred HHHHHHcCCHHHHHHH-------------------HHCCCCCCCcCCCCCCHHHHHHH
Confidence 9999999986654433 33689999999999999999954
No 69
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.35 E-value=1e-13 Score=120.17 Aligned_cols=102 Identities=18% Similarity=0.202 Sum_probs=83.2
Q ss_pred HhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCC
Q 046030 33 AHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPI 112 (331)
Q Consensus 33 a~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~ 112 (331)
|+.|+.-.|+.-++......+.-|..|.+|||+||+.|+..+++.|+.+|+.. |..+...+||||+|+..||.+++
T Consensus 8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarv----n~tnmgddtplhlaaahghrdiv 83 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARV----NSTNMGDDTPLHLAAAHGHRDIV 83 (448)
T ss_pred hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhccccc----ccccCCCCcchhhhhhcccHHHH
Confidence 55566555555555444447888999999999999999999999999999984 55788889999999999998875
Q ss_pred CCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 113 SKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 113 ~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
+.| +...+++|+.|..|+||+|+|+-
T Consensus 84 qkl-------------------l~~kadvnavnehgntplhyacf 109 (448)
T KOG0195|consen 84 QKL-------------------LSRKADVNAVNEHGNTPLHYACF 109 (448)
T ss_pred HHH-------------------HHHhcccchhhccCCCchhhhhh
Confidence 432 34678999999999999999953
No 70
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.34 E-value=1.1e-12 Score=131.80 Aligned_cols=111 Identities=22% Similarity=0.206 Sum_probs=91.2
Q ss_pred HHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhC
Q 046030 28 QPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYS 107 (331)
Q Consensus 28 ~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g 107 (331)
.|+.|+..|+.+.++.|++.+++ ++.+|.+|+||||+|+.+|+.+++++|++.|++. |.+|.+|+||||+|+..|
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gad-in~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadv----n~~d~~G~TpLh~A~~~g 159 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGAD-PNCRDYDGRTPLHIACANGHVQVVRVLLEFGADP----TLLDKDGKTPLELAEENG 159 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC----CCCCCCCCCHHHHHHHCC
Confidence 58899999999999999999998 7899999999999999999999999999999885 459999999999999999
Q ss_pred CCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhch
Q 046030 108 NPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELF 155 (331)
Q Consensus 108 ~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la 155 (331)
+.+++++|.... ......+++.+..+.+|++|+...
T Consensus 160 ~~~iv~~Ll~~~------------~~~~~~ga~~~~~~~~g~~~~~~~ 195 (664)
T PTZ00322 160 FREVVQLLSRHS------------QCHFELGANAKPDSFTGKPPSLED 195 (664)
T ss_pred cHHHHHHHHhCC------------CcccccCCCCCccccCCCCccchh
Confidence 988766541000 000123667777888888877655
No 71
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.34 E-value=8e-13 Score=95.69 Aligned_cols=106 Identities=16% Similarity=0.128 Sum_probs=86.3
Q ss_pred CHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhh
Q 046030 27 PQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQY 106 (331)
Q Consensus 27 t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~ 106 (331)
-.+.++.++|..+-|+..+..+-+ ++.. ..|++|||+|+-.|+.+++++|+..|++. +.+|+.|-|||--|+..
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~n-Vn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i----~~kDKygITPLLsAvwE 77 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLN-VNEI-YGGRTPLHYAADYGQLSILEFLISIGANI----QDKDKYGITPLLSAVWE 77 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHcccc-HHHH-hCCcccchHhhhcchHHHHHHHHHhcccc----CCccccCCcHHHHHHHH
Confidence 356788999999999999888865 3333 27999999999999999999999999984 55999999999999999
Q ss_pred CCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 107 SNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 107 g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
||.+++++| +..|++...+..+|.+.++.+.+
T Consensus 78 GH~~cVklL-------------------L~~GAdrt~~~PdG~~~~eate~ 109 (117)
T KOG4214|consen 78 GHRDCVKLL-------------------LQNGADRTIHAPDGTALIEATEE 109 (117)
T ss_pred hhHHHHHHH-------------------HHcCcccceeCCCchhHHhhccH
Confidence 997776544 33588888888889888876643
No 72
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.34 E-value=8.2e-13 Score=123.32 Aligned_cols=82 Identities=18% Similarity=0.199 Sum_probs=75.0
Q ss_pred HHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhC
Q 046030 28 QPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYS 107 (331)
Q Consensus 28 ~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g 107 (331)
.+.-|+..|+.+-++.++..+.+ ++..+.+|.|+||-+|.-.+.+||+++++.|++ +|++|++|+||||-|+..|
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~-~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~----Vn~~d~e~wtPlhaaascg 117 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGAS-PNLCNVDGLTALHQACIDDNLEMVKFLVENGAN----VNAQDNEGWTPLHAAASCG 117 (527)
T ss_pred HHHhccccccHHHHHHHhccCCC-ccccCCccchhHHHHHhcccHHHHHHHHHhcCC----ccccccccCCcchhhcccc
Confidence 46678899999999999999887 688999999999999999999999999999998 5779999999999999999
Q ss_pred CCCCCCC
Q 046030 108 NPKPISK 114 (331)
Q Consensus 108 ~~~~~~~ 114 (331)
+..++.+
T Consensus 118 ~~~i~~~ 124 (527)
T KOG0505|consen 118 YLNIVEY 124 (527)
T ss_pred cHHHHHH
Confidence 9887654
No 73
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.31 E-value=4.7e-12 Score=94.13 Aligned_cols=61 Identities=21% Similarity=0.345 Sum_probs=56.2
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchh
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKE 86 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~ 86 (331)
|+||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|++.+
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 86 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLLENGAD-INSQDKNGNTALHYAAENGNLEIVKLLLEHGADVN 86 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHHHTTTC-TT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccc-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 68999999999999999999999998 78999999999999999999999999999998754
No 74
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.29 E-value=1.9e-12 Score=93.77 Aligned_cols=93 Identities=19% Similarity=0.303 Sum_probs=78.5
Q ss_pred ccccCCceeEEEecccCC-C----CCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHH
Q 046030 4 RRTNGGKTYQVRVSIPDG-D----AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLI 78 (331)
Q Consensus 4 ~~~~~g~~~~~~~~l~~~-d----~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~L 78 (331)
++..+|..+.++..++++ | ..|++|||+||-.|..+++++|+..+++ ++.+|+.|-|||--|+..||.++|++|
T Consensus 8 W~vkNG~~DeVk~~v~~g~nVn~~~ggR~plhyAAD~GQl~ilefli~iGA~-i~~kDKygITPLLsAvwEGH~~cVklL 86 (117)
T KOG4214|consen 8 WNVKNGEIDEVKQSVNEGLNVNEIYGGRTPLHYAADYGQLSILEFLISIGAN-IQDKDKYGITPLLSAVWEGHRDCVKLL 86 (117)
T ss_pred hhhccCcHHHHHHHHHccccHHHHhCCcccchHhhhcchHHHHHHHHHhccc-cCCccccCCcHHHHHHHHhhHHHHHHH
Confidence 455667666666655544 1 3689999999999999999999999999 899999999999999999999999999
Q ss_pred HhhCCchhhhhhhcccCCCcHHH
Q 046030 79 YEIGFSKELIATYVDKSGNNLLH 101 (331)
Q Consensus 79 l~~~~~~~~~in~~d~~G~TpLH 101 (331)
+++|++... +..+|.+.+.
T Consensus 87 L~~GAdrt~----~~PdG~~~~e 105 (117)
T KOG4214|consen 87 LQNGADRTI----HAPDGTALIE 105 (117)
T ss_pred HHcCcccce----eCCCchhHHh
Confidence 999999765 6777776654
No 75
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.28 E-value=1.7e-12 Score=125.36 Aligned_cols=132 Identities=15% Similarity=0.216 Sum_probs=104.8
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++-.|.+|.+|||+|++.|+.|+++.++.+. +..+..+..|.||||.||++||.+++.+|++.++++.+ +|+++.
T Consensus 75 ldl~d~kg~~plhlaaw~g~~e~vkmll~q~-d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i----~nns~~ 149 (854)
T KOG0507|consen 75 LDLCDTKGILPLHLAAWNGNLEIVKMLLLQT-DILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFI----RNNSKE 149 (854)
T ss_pred hhhhhccCcceEEehhhcCcchHHHHHHhcc-cCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccc----cCcccc
Confidence 4445688999999999999999999999988 54888999999999999999999999999999999877 899999
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchH-HhhhhHHHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFT-AEHKTLLEE 165 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~-~~~~~l~~~ 165 (331)
|+|.+|++.|..++++.+....+-.+. +.. ..-..++-.+-+|+|+|. ++|.++++.
T Consensus 150 t~ldlA~qfgr~~Vvq~ll~~~~~~~~----------~~~-~~~~~~~~~~~~plHlaakngh~~~~~~ 207 (854)
T KOG0507|consen 150 TVLDLASRFGRAEVVQMLLQKKFPVQS----------SLR-VGDIKRPFPAIYPLHLAAKNGHVECMQA 207 (854)
T ss_pred cHHHHHHHhhhhHHHHHHhhhccchhh----------ccc-CCCCCCCCCCcCCcchhhhcchHHHHHH
Confidence 999999999999988766332211111 111 113456677888999984 456666543
No 76
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.25 E-value=5.2e-12 Score=105.70 Aligned_cols=116 Identities=15% Similarity=0.149 Sum_probs=85.9
Q ss_pred CCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHH
Q 046030 23 AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHL 102 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHl 102 (331)
--+.+|+.+++.+-+.+.+.++.+. .++..|+.|.|||.+|+.+|+.++|++|++.|++++. ..+...|+|.+
T Consensus 127 ~~p~s~~slsVhql~L~~~~~~~~n---~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~----lgk~resALsL 199 (296)
T KOG0502|consen 127 LMPWSPLSLSVHQLHLDVVDLLVNN---KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDA----LGKYRESALSL 199 (296)
T ss_pred cccCChhhHHHHHHHHHHHHHHhhc---cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhh----hhhhhhhhHhH
Confidence 3366777777777777666555443 2567788888888888888888888888888888766 56677788888
Q ss_pred HHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHH
Q 046030 103 AAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 103 Aa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~ 164 (331)
|++.|..+++++| +.++.++|.-|-+|-|||-+|.+ +|.++++
T Consensus 200 At~ggytdiV~lL-------------------L~r~vdVNvyDwNGgTpLlyAvrgnhvkcve 243 (296)
T KOG0502|consen 200 ATRGGYTDIVELL-------------------LTREVDVNVYDWNGGTPLLYAVRGNHVKCVE 243 (296)
T ss_pred HhcCChHHHHHHH-------------------HhcCCCcceeccCCCceeeeeecCChHHHHH
Confidence 8888876665443 33678899999999999999965 4555544
No 77
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.25 E-value=6.1e-12 Score=85.10 Aligned_cols=50 Identities=16% Similarity=0.230 Sum_probs=32.6
Q ss_pred ecccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHH
Q 046030 16 VSIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIA 66 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~A 66 (331)
..++.+|.+|.||||+||..|+.++++.|++.+.+ ++.+|.+|+||||+|
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d-~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGAD-PNAKDKDGQTPLHYA 56 (56)
T ss_dssp --TT---TTS--HHHHHHHHT-HHHHHHHHHCT---TT---TTS--HHHH-
T ss_pred CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCC-CCCCcCCCCCHHHhC
Confidence 45788999999999999999999999999988888 899999999999997
No 78
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.24 E-value=3.1e-12 Score=85.91 Aligned_cols=51 Identities=29% Similarity=0.345 Sum_probs=40.3
Q ss_pred CccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCC
Q 046030 59 DRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPIS 113 (331)
Q Consensus 59 G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~ 113 (331)
|+||||+|+..|+.+++++|++.|.+. |.+|.+|+||||+|+..|+.++++
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~di----n~~d~~g~t~lh~A~~~g~~~~~~ 51 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADI----NAQDEDGRTPLHYAAKNGNIDIVK 51 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGT----T-B-TTS--HHHHHHHTT-HHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCC----CCCCCCCCCHHHHHHHccCHHHHH
Confidence 789999999999999999999998773 669999999999999999866543
No 79
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.24 E-value=1.1e-11 Score=110.90 Aligned_cols=87 Identities=17% Similarity=0.245 Sum_probs=78.5
Q ss_pred CCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhC-CchhhhhhhcccCCCcHHH
Q 046030 23 AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIG-FSKELIATYVDKSGNNLLH 101 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~-~~~~~~in~~d~~G~TpLH 101 (331)
..|+|+|+.|+.+|+.++|+.||..++| +|.+|.+|-|+|++|+++||.+++++|+..+ ++.. ..|.+|-|+|.
T Consensus 338 Q~gQTALMLAVSHGr~d~vk~LLacgAd-VNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~s----LtD~DgSTAl~ 412 (452)
T KOG0514|consen 338 QHGQTALMLAVSHGRVDMVKALLACGAD-VNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDIS----LTDVDGSTALS 412 (452)
T ss_pred hhcchhhhhhhhcCcHHHHHHHHHccCC-CccccCCccHHHhhhhhhChHHHHHHHhccCcccce----eecCCCchhhh
Confidence 4589999999999999999999999999 8999999999999999999999999999864 3433 39999999999
Q ss_pred HHHhhCCCCCCCC
Q 046030 102 LAAQYSNPKPISK 114 (331)
Q Consensus 102 lAa~~g~~~~~~~ 114 (331)
+|-..||.++.-+
T Consensus 413 IAleagh~eIa~m 425 (452)
T KOG0514|consen 413 IALEAGHREIAVM 425 (452)
T ss_pred hHHhcCchHHHHH
Confidence 9999999886543
No 80
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.18 E-value=2.6e-11 Score=104.71 Aligned_cols=94 Identities=20% Similarity=0.258 Sum_probs=85.1
Q ss_pred ecccCCCCCCCCHHHHHHhcCc-----HHHHHHHHHhCC--CcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhh
Q 046030 16 VSIPDGDAANSPQPLQNAHSGN-----FKFLAVLIRSYP--DLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELI 88 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh~Aa~~G~-----~~~v~~Ll~~~~--~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~ 88 (331)
..++.+|.+|.||||+|+..|+ .++++.|++.++ +..+.+|.+|+||||+|+..|+.++++++++.+++.+.
T Consensus 97 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~- 175 (235)
T COG0666 97 ADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNS- 175 (235)
T ss_pred CCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcc-
Confidence 3457788999999999999999 999999999999 66788899999999999999999999999999998654
Q ss_pred hhhcccCCCcHHHHHHhhCCCCCCC
Q 046030 89 ATYVDKSGNNLLHLAAQYSNPKPIS 113 (331)
Q Consensus 89 in~~d~~G~TpLHlAa~~g~~~~~~ 113 (331)
+|..|.|++|.|+..++.+...
T Consensus 176 ---~~~~g~t~l~~a~~~~~~~~~~ 197 (235)
T COG0666 176 ---RNSYGVTALDPAAKNGRIELVK 197 (235)
T ss_pred ---cccCCCcchhhhcccchHHHHH
Confidence 7999999999999999977543
No 81
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.16 E-value=4.4e-11 Score=111.33 Aligned_cols=102 Identities=24% Similarity=0.245 Sum_probs=84.2
Q ss_pred HHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCC
Q 046030 29 PLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSN 108 (331)
Q Consensus 29 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~ 108 (331)
|.-|+..|.+|+|+.++..-.| ..+.+..|-|+||-|++.||.+||++|++.|++ +|+.|.+|+||||.||..++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~D-pSqpNdEGITaLHNAiCaghyeIVkFLi~~gan----VNa~DSdGWTPLHCAASCNn 628 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTD-PSQPNDEGITALHNAICAGHYEIVKFLIEFGAN----VNAADSDGWTPLHCAASCNN 628 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcC-CCCCCccchhHHhhhhhcchhHHHHHHHhcCCc----ccCccCCCCchhhhhhhcCc
Confidence 5679999999999999998877 788899999999999999999999999999998 57799999999999999988
Q ss_pred CCCCCCCCCcHHhhHHhhhhhhhhhhhc-Cccccc-ccccCCCCchhch
Q 046030 109 PKPISKVPGAALEMQRELITFKEVETIV-KPSFKE-MKNNDGKTPWELF 155 (331)
Q Consensus 109 ~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~~-~~n~~G~Tpl~la 155 (331)
..++ +.|+ .|+.+- ..=.|++||.+-.
T Consensus 629 v~~c--------------------kqLVe~GaavfAsTlSDmeTa~eKC 657 (752)
T KOG0515|consen 629 VPMC--------------------KQLVESGAAVFASTLSDMETAAEKC 657 (752)
T ss_pred hHHH--------------------HHHHhccceEEeeecccccchhhhc
Confidence 5543 3344 344433 3446788887654
No 82
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.16 E-value=9.8e-11 Score=91.42 Aligned_cols=88 Identities=23% Similarity=0.333 Sum_probs=78.5
Q ss_pred cCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCc
Q 046030 19 PDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNN 98 (331)
Q Consensus 19 ~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~T 98 (331)
+..+..|.+|+|.|+..++.++++.|++.+++ .+..|..|.||+|+|+..++.+++++|++.+.+. +..|..|.|
T Consensus 34 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~----~~~~~~~~~ 108 (126)
T cd00204 34 NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD-VNARDKDGNTPLHLAARNGNLDVVKLLLKHGADV----NARDKDGRT 108 (126)
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC----cccCCCCCC
Confidence 56778899999999999999999999999986 6788899999999999999999999999988664 448899999
Q ss_pred HHHHHHhhCCCCC
Q 046030 99 LLHLAAQYSNPKP 111 (331)
Q Consensus 99 pLHlAa~~g~~~~ 111 (331)
|+|+|...++.++
T Consensus 109 ~l~~~~~~~~~~~ 121 (126)
T cd00204 109 PLHLAAKNGHLEV 121 (126)
T ss_pred HHHHHHhcCCHHH
Confidence 9999999877554
No 83
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.14 E-value=6.4e-11 Score=102.85 Aligned_cols=95 Identities=15% Similarity=0.219 Sum_probs=87.8
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++-.|+.|.++|..|+.+|+.++|+.|++.++|....++..+.||||.|+..|+.++.++|++.|+.... .|.-|+
T Consensus 38 vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~----vNsvgr 113 (396)
T KOG1710|consen 38 VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYL----VNSVGR 113 (396)
T ss_pred hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCcccc----ccchhh
Confidence 6778899999999999999999999999999997777799999999999999999999999999998776 788899
Q ss_pred cHHHHHHhhCCCCCCCCCC
Q 046030 98 NLLHLAAQYSNPKPISKVP 116 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~ 116 (331)
|+-.+|+.-|+.+++.+++
T Consensus 114 TAaqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 114 TAAQMAAFVGHHECVAIIN 132 (396)
T ss_pred hHHHHHHHhcchHHHHHHh
Confidence 9999999999999887653
No 84
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.06 E-value=1.5e-09 Score=106.46 Aligned_cols=88 Identities=18% Similarity=0.258 Sum_probs=79.2
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHH
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLA 103 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlA 103 (331)
-|..||-.||..++.|+++.|+++++| ++.+|++|+|.||..+.+-..++.+++++.|++. +...+|++|-|||.+|
T Consensus 239 fGEyPLSfAAC~nq~eivrlLl~~gAd-~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~--l~~v~N~qgLTPLtLA 315 (782)
T KOG3676|consen 239 FGEYPLSFAACTNQPEIVRLLLAHGAD-PNAQDSNGNTVLHMLVIHFVTEMYDLALELGANA--LEHVRNNQGLTPLTLA 315 (782)
T ss_pred eccCchHHHHHcCCHHHHHHHHhcCCC-CCccccCCChHHHHHHHHHHHHHHHHHHhcCCCc--cccccccCCCChHHHH
Confidence 388999999999999999999999999 8999999999999999999999999999999881 1233899999999999
Q ss_pred HhhCCCCCCCC
Q 046030 104 AQYSNPKPISK 114 (331)
Q Consensus 104 a~~g~~~~~~~ 114 (331)
|+.|..++.+.
T Consensus 316 aklGk~emf~~ 326 (782)
T KOG3676|consen 316 AKLGKKEMFQH 326 (782)
T ss_pred HHhhhHHHHHH
Confidence 99999876544
No 85
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.97 E-value=8.4e-10 Score=96.02 Aligned_cols=109 Identities=15% Similarity=0.109 Sum_probs=96.0
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHH
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAA 104 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa 104 (331)
...||..+.-.|+.+-...|++.-.+ ++.+|.+|.++|..|+..|+.+.++++++.|+|.+.- ++..+.||||.|+
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~vr~-vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~---qhg~~YTpLmFAA 87 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLSTVRQ-VNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDK---QHGTLYTPLMFAA 87 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHHhhh-hhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcc---cccccccHHHHHH
Confidence 36899999999999999999987555 7899999999999999999999999999999997653 7788999999999
Q ss_pred hhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchH
Q 046030 105 QYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFT 156 (331)
Q Consensus 105 ~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~ 156 (331)
..|+.++.+++ +..|+.....|.-|+|+-++|+
T Consensus 88 LSGn~dvcrll-------------------ldaGa~~~~vNsvgrTAaqmAA 120 (396)
T KOG1710|consen 88 LSGNQDVCRLL-------------------LDAGARMYLVNSVGRTAAQMAA 120 (396)
T ss_pred HcCCchHHHHH-------------------HhccCccccccchhhhHHHHHH
Confidence 99998876654 4467778889999999998884
No 86
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.94 E-value=1.7e-09 Score=108.97 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=73.6
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhh-------CCchhhhh
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEI-------GFSKELIA 89 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~-------~~~~~~~i 89 (331)
.++.+|.+|.||||+|+..|+.++++.|++.+++ ++.+|.+|+||||+|+.+|+.+++++|++. +++.
T Consensus 107 din~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad-vn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~---- 181 (664)
T PTZ00322 107 DPNCRDYDGRTPLHIACANGHVQVVRVLLEFGAD-PTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANA---- 181 (664)
T ss_pred CCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCC----
Confidence 4677889999999999999999999999999999 789999999999999999999999999988 5553
Q ss_pred hhcccCCCcHHHHHHh
Q 046030 90 TYVDKSGNNLLHLAAQ 105 (331)
Q Consensus 90 n~~d~~G~TpLHlAa~ 105 (331)
+..+.+|++|+-.+..
T Consensus 182 ~~~~~~g~~~~~~~~~ 197 (664)
T PTZ00322 182 KPDSFTGKPPSLEDSP 197 (664)
T ss_pred CccccCCCCccchhhh
Confidence 4477788888776553
No 87
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.88 E-value=2.3e-09 Score=100.07 Aligned_cols=80 Identities=13% Similarity=0.106 Sum_probs=68.2
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcH
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNL 99 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 99 (331)
..+.+|-|+||-|+..||.++|++|++.+.+ ++..|++||||||+|+..++..+++.|++.|+-.- -..=.|+.||
T Consensus 578 qpNdEGITaLHNAiCaghyeIVkFLi~~gan-VNa~DSdGWTPLHCAASCNnv~~ckqLVe~Gaavf---AsTlSDmeTa 653 (752)
T KOG0515|consen 578 QPNDEGITALHNAICAGHYEIVKFLIEFGAN-VNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVF---ASTLSDMETA 653 (752)
T ss_pred CCCccchhHHhhhhhcchhHHHHHHHhcCCc-ccCccCCCCchhhhhhhcCchHHHHHHHhccceEE---eeecccccch
Confidence 4567899999999999999999999999999 89999999999999999999999999999987531 1234566776
Q ss_pred HHHH
Q 046030 100 LHLA 103 (331)
Q Consensus 100 LHlA 103 (331)
..-+
T Consensus 654 ~eKC 657 (752)
T KOG0515|consen 654 AEKC 657 (752)
T ss_pred hhhc
Confidence 5443
No 88
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.72 E-value=2.1e-09 Score=105.04 Aligned_cols=84 Identities=20% Similarity=0.178 Sum_probs=60.7
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccc-cCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELD-EEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.+-+|..|+|+||+|+..|..++++.|++++.| +..+| +.|+||||-|..+|+.+++.+|++.|....+ +|++|
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGid-v~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i----~Dkeg 119 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGID-VFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI----KDKEG 119 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCce-eeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE----ecccC
Confidence 455667777777777777777777777777777 44444 4677777777777777777777777765444 77777
Q ss_pred CcHHHHHHhh
Q 046030 97 NNLLHLAAQY 106 (331)
Q Consensus 97 ~TpLHlAa~~ 106 (331)
..||..-++-
T Consensus 120 lsplq~~~r~ 129 (1267)
T KOG0783|consen 120 LSPLQFLSRV 129 (1267)
T ss_pred CCHHHHHhhc
Confidence 7777776663
No 89
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.67 E-value=9.1e-08 Score=88.92 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=80.6
Q ss_pred ccCCCCCCCCH------HHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhh
Q 046030 18 IPDGDAANSPQ------PLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATY 91 (331)
Q Consensus 18 l~~~d~~g~t~------Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~ 91 (331)
..-+|.+|.+. ||-.++.|+.|..-.|+..|++....-.++|.||||+|++.|+..-+++|.-.|+++ ++
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~----~a 195 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADP----GA 195 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCC----CC
Confidence 44566776654 899999999999999999999954445678999999999999999999999999995 55
Q ss_pred cccCCCcHHHHHHhhCCCCCCCCC
Q 046030 92 VDKSGNNLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 92 ~d~~G~TpLHlAa~~g~~~~~~~l 115 (331)
.|.+|.||+.+|-..||.++.+.|
T Consensus 196 ~d~~GmtP~~~AR~~gH~~laeRl 219 (669)
T KOG0818|consen 196 QDSSGMTPVDYARQGGHHELAERL 219 (669)
T ss_pred CCCCCCcHHHHHHhcCchHHHHHH
Confidence 999999999999999998865544
No 90
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.66 E-value=7e-09 Score=104.16 Aligned_cols=135 Identities=15% Similarity=0.147 Sum_probs=102.2
Q ss_pred CCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHH
Q 046030 23 AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHL 102 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHl 102 (331)
..-.|+|-.||..||.|.|++|+.++.+ ++.+|.+|.+||.+|+-.||..+|+-|++..++.+.- .|+.++|+|.+
T Consensus 755 ~n~~t~LT~acaggh~e~vellv~rgan-iehrdkkgf~plImaatagh~tvV~~llk~ha~veaQ---sdrtkdt~lSl 830 (2131)
T KOG4369|consen 755 PNIKTNLTSACAGGHREEVELLVVRGAN-IEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQ---SDRTKDTMLSL 830 (2131)
T ss_pred ccccccccccccCccHHHHHHHHHhccc-ccccccccchhhhhhcccCchHHHHHHHhhhhhhhhh---cccccCceEEE
Confidence 4457999999999999999999999999 8999999999999999999999999999988876653 88999999999
Q ss_pred HHhhCCCCCCCCCCCc-------------HHhhHHhhhhhhhhhhhc-Cccccccc--ccCCCCchhchH-Hhhhh
Q 046030 103 AAQYSNPKPISKVPGA-------------ALEMQRELITFKEVETIV-KPSFKEMK--NNDGKTPWELFT-AEHKT 161 (331)
Q Consensus 103 Aa~~g~~~~~~~l~~~-------------~l~~~~~l~~~~~v~~l~-~~~~~~~~--n~~G~Tpl~la~-~~~~~ 161 (331)
||.-|+.+.+++|..+ ++.+.+.-.+.+.++.++ .|..++.+ .+.|-.||.+|. .+|.+
T Consensus 831 acsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~ 906 (2131)
T KOG4369|consen 831 ACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQA 906 (2131)
T ss_pred ecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccH
Confidence 9999999887766322 122222333444555544 45444433 456777777773 34543
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.63 E-value=1e-08 Score=94.71 Aligned_cols=90 Identities=18% Similarity=0.254 Sum_probs=79.3
Q ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhC-CchhhhhhhcccCCCcH
Q 046030 21 GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIG-FSKELIATYVDKSGNNL 99 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~-~~~~~~in~~d~~G~Tp 99 (331)
++.++..++.+|++.|++..++.+.-.+.| .+.+|.+.+|+||+||..|+.+++++|++.. .++ +.+|..|+||
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D-~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~----~~kDRw~rtP 576 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMD-LETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDP----DPKDRWGRTP 576 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhccc-ccccccccchhheeecccCceeHHHHHHHHHcCCC----ChhhccCCCc
Confidence 445667889999999999999999988888 8999999999999999999999999999853 343 4499999999
Q ss_pred HHHHHhhCCCCCCCCC
Q 046030 100 LHLAAQYSNPKPISKV 115 (331)
Q Consensus 100 LHlAa~~g~~~~~~~l 115 (331)
|.-|...+|.+++++|
T Consensus 577 lDdA~~F~h~~v~k~L 592 (622)
T KOG0506|consen 577 LDDAKHFKHKEVVKLL 592 (622)
T ss_pred chHhHhcCcHHHHHHH
Confidence 9999999998877665
No 92
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.54 E-value=1e-08 Score=102.93 Aligned_cols=147 Identities=17% Similarity=0.174 Sum_probs=110.6
Q ss_pred ccCCceeEEEec------ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHH
Q 046030 6 TNGGKTYQVRVS------IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIY 79 (331)
Q Consensus 6 ~~~g~~~~~~~~------l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll 79 (331)
+.+|+.+.++.. +..+|+.|.+||.+|+-.||..+|+.|+++..+.-...|..+.|+|-+||..|+.++|++|+
T Consensus 765 caggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl 844 (2131)
T KOG4369|consen 765 CAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLL 844 (2131)
T ss_pred ccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHH
Confidence 456666666544 55688999999999999999999999999999955666999999999999999999999999
Q ss_pred hhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCc---------------HHhhHHhhhhhhhhhhhc-Ccccccc
Q 046030 80 EIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGA---------------ALEMQRELITFKEVETIV-KPSFKEM 143 (331)
Q Consensus 80 ~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~---------------~l~~~~~l~~~~~v~~l~-~~~~~~~ 143 (331)
..|++... ++-...|||.+|..-|..+++..+..+ ++-+......-+..+.++ ++.++|.
T Consensus 845 ~~gankeh----rnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNa 920 (2131)
T KOG4369|consen 845 NAGANKEH----RNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINA 920 (2131)
T ss_pred Hhhccccc----cchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhcc
Confidence 99988765 778889999999999988887655221 122222222233333344 5777765
Q ss_pred c-ccCCCCchhchH
Q 046030 144 K-NNDGKTPWELFT 156 (331)
Q Consensus 144 ~-n~~G~Tpl~la~ 156 (331)
. ..+-+|+|-+|.
T Consensus 921 qIeTNrnTaltla~ 934 (2131)
T KOG4369|consen 921 QIETNRNTALTLAL 934 (2131)
T ss_pred ccccccccceeecc
Confidence 4 235578888874
No 93
>PF13606 Ank_3: Ankyrin repeat
Probab=98.53 E-value=1e-07 Score=55.37 Aligned_cols=27 Identities=22% Similarity=0.347 Sum_probs=18.4
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhhCCc
Q 046030 58 EDRSIFHIAVMHRHAETFKLIYEIGFS 84 (331)
Q Consensus 58 ~G~t~LH~Aa~~g~~~iv~~Ll~~~~~ 84 (331)
+|+||||+|+++|+.+++++|++.|++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad 27 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGAD 27 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 366777777777777777777766655
No 94
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.52 E-value=6e-08 Score=95.13 Aligned_cols=70 Identities=24% Similarity=0.288 Sum_probs=61.5
Q ss_pred HHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC-CCcHHHHHHhhCCCCCCCCC
Q 046030 42 AVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS-GNNLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 42 ~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~-G~TpLHlAa~~g~~~~~~~l 115 (331)
..+-+.|.+.++.+|..|||+||+|+..++.+++++|+++|.+. +.+|++ |.||||-|..+|+.+++.+|
T Consensus 35 ~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv----~vqD~ESG~taLHRaiyyG~idca~lL 105 (1267)
T KOG0783|consen 35 GFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDV----FVQDEESGYTALHRAIYYGNIDCASLL 105 (1267)
T ss_pred HHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCcee----eeccccccchHhhHhhhhchHHHHHHH
Confidence 34556777878999999999999999999999999999999884 448876 99999999999999987655
No 95
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.49 E-value=7.1e-08 Score=90.95 Aligned_cols=90 Identities=20% Similarity=0.248 Sum_probs=78.9
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCC-cccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCc
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSYPD-LVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNN 98 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~-~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~T 98 (331)
.++.+..+.||+|++.|+-|+|+++++++|. ..+..|+.|.|+||-|+..++..+.++|.+.|+... ..|..|.|
T Consensus 894 ~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~----ktd~kg~t 969 (1004)
T KOG0782|consen 894 IQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLR----KTDSKGKT 969 (1004)
T ss_pred eeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhhe----ecccCCCC
Confidence 3566778999999999999999999999985 456778999999999999999999999999998743 38999999
Q ss_pred HHHHHHhhCCCCCCC
Q 046030 99 LLHLAAQYSNPKPIS 113 (331)
Q Consensus 99 pLHlAa~~g~~~~~~ 113 (331)
|-.-|-+.|+++...
T Consensus 970 p~eraqqa~d~dlaa 984 (1004)
T KOG0782|consen 970 PQERAQQAGDPDLAA 984 (1004)
T ss_pred hHHHHHhcCCchHHH
Confidence 999999999987543
No 96
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.46 E-value=2.7e-07 Score=54.96 Aligned_cols=29 Identities=21% Similarity=0.363 Sum_probs=19.9
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhhCCchh
Q 046030 58 EDRSIFHIAVMHRHAETFKLIYEIGFSKE 86 (331)
Q Consensus 58 ~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~ 86 (331)
+|+||||+|++.|+.+++++|++.|++++
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~ 29 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADIN 29 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCC
Confidence 46777777777777777777777776643
No 97
>PF13606 Ank_3: Ankyrin repeat
Probab=98.41 E-value=3.3e-07 Score=53.26 Aligned_cols=27 Identities=19% Similarity=0.246 Sum_probs=25.7
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCC
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPD 50 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~ 50 (331)
+|+||||+||+.|+.|+++.|+++++|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad 27 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGAD 27 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 589999999999999999999999987
No 98
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.41 E-value=3.4e-07 Score=85.21 Aligned_cols=94 Identities=20% Similarity=0.234 Sum_probs=74.3
Q ss_pred ccccCCccH------HHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhh
Q 046030 54 ELDEEDRSI------FHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELI 127 (331)
Q Consensus 54 ~~d~~G~t~------LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~ 127 (331)
.+|.+|.+. ||-.++.|+.+..--|+..|++.+-. --..|+||||.|++.|+...+++|
T Consensus 122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~---hpekg~TpLHvAAk~Gq~~Q~ElL------------ 186 (669)
T KOG0818|consen 122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFF---HPEKGNTPLHVAAKAGQILQAELL------------ 186 (669)
T ss_pred CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCC---CcccCCchhHHHHhccchhhhhHH------------
Confidence 456666554 99999999999988899999986552 345699999999999996655443
Q ss_pred hhhhhhhhcCcccccccccCCCCchhchH-HhhhhHHHHHHHH
Q 046030 128 TFKEVETIVKPSFKEMKNNDGKTPWELFT-AEHKTLLEEAENW 169 (331)
Q Consensus 128 ~~~~v~~l~~~~~~~~~n~~G~Tpl~la~-~~~~~l~~~~~~~ 169 (331)
.+.|+++...|.+|.||+++|. .+|.++.++..+.
T Consensus 187 -------~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 187 -------AVYGADPGAQDSSGMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred -------hhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence 5689999999999999999995 4677776665543
No 99
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.40 E-value=3.6e-07 Score=54.41 Aligned_cols=32 Identities=16% Similarity=0.251 Sum_probs=29.0
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCCcccccc
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELD 56 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d 56 (331)
+|.||||+|+..|+.++++.|++++++ ++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGAD-INARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSC-TTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCC-CCCCC
Confidence 589999999999999999999999998 66665
No 100
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.38 E-value=3.5e-07 Score=86.41 Aligned_cols=107 Identities=21% Similarity=0.184 Sum_probs=86.2
Q ss_pred HHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCC
Q 046030 29 PLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSN 108 (331)
Q Consensus 29 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~ 108 (331)
+..|+..+++--+++.-..+.+ .-.++.+.++.||+|+..|+-++|+|+++++... ++++.|..|.|+||-|+..++
T Consensus 870 il~av~~~D~~klqE~h~~gg~-ll~~~~~~~sllh~a~~tg~~eivkyildh~p~e--lld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGS-LLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSE--LLDMADETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCc-eEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHH--HHHHHhhhhhHHHHHHHHhcc
Confidence 5677777777666666666777 5678889999999999999999999999998653 357899999999999999988
Q ss_pred CCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 109 PKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 109 ~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
..+.+++ ...|+.+...|.+|+||.+-|++
T Consensus 947 r~vc~~l-------------------vdagasl~ktd~kg~tp~eraqq 976 (1004)
T KOG0782|consen 947 RAVCQLL-------------------VDAGASLRKTDSKGKTPQERAQQ 976 (1004)
T ss_pred hHHHHHH-------------------HhcchhheecccCCCChHHHHHh
Confidence 6654332 22477788899999999988854
No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.36 E-value=4.3e-07 Score=85.43 Aligned_cols=82 Identities=18% Similarity=0.194 Sum_probs=62.8
Q ss_pred CHHHHHHhcCcHHHHHHHH-HhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHh
Q 046030 27 PQPLQNAHSGNFKFLAVLI-RSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQ 105 (331)
Q Consensus 27 t~Lh~Aa~~G~~~~v~~Ll-~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~ 105 (331)
-|+|.++...+.+-....+ ..-...++.+|..|+||||+|+..|+.+.++.|+..|++..+ +|++|++|||.|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~----kN~~gWs~L~EAv~ 97 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI----KNNEGWSPLHEAVS 97 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc----cccccccHHHHHHH
Confidence 3588888877776555433 333334677888889999999999998888888888888655 88889999999988
Q ss_pred hCCCCCC
Q 046030 106 YSNPKPI 112 (331)
Q Consensus 106 ~g~~~~~ 112 (331)
.|+.+++
T Consensus 98 ~g~~q~i 104 (560)
T KOG0522|consen 98 TGNEQII 104 (560)
T ss_pred cCCHHHH
Confidence 8887654
No 102
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.26 E-value=1.9e-06 Score=81.14 Aligned_cols=66 Identities=17% Similarity=0.158 Sum_probs=60.0
Q ss_pred EecccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhh
Q 046030 15 RVSIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEI 81 (331)
Q Consensus 15 ~~~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~ 81 (331)
...++.+|..|+||||.|+..||.+.++.|+..+++ +..+|++||+|||-|+..|+..++..++.+
T Consensus 45 ~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad-v~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 45 SLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD-VSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred hceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC-ccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 345788899999999999999999999999999999 889999999999999999999888777654
No 103
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.16 E-value=3.2e-06 Score=80.24 Aligned_cols=60 Identities=20% Similarity=0.206 Sum_probs=29.4
Q ss_pred CCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCC
Q 046030 23 AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGF 83 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~ 83 (331)
.+|+|+||.||..|++.+.++|+-++.| +..+|.+|+|+|.||-+.|..+++..|++.|.
T Consensus 659 ~~grt~LHLa~~~gnVvl~QLLiWyg~d-v~~rda~g~t~l~yar~a~sqec~d~llq~gc 718 (749)
T KOG0705|consen 659 GDGRTALHLAARKGNVVLAQLLIWYGVD-VMARDAHGRTALFYARQAGSQECIDVLLQYGC 718 (749)
T ss_pred CCCcchhhhhhhhcchhHHHHHHHhCcc-ceecccCCchhhhhHhhcccHHHHHHHHHcCC
Confidence 3444555555555555554544444444 44445555555555555555555555544443
No 104
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.07 E-value=1.8e-06 Score=87.49 Aligned_cols=87 Identities=20% Similarity=0.228 Sum_probs=79.0
Q ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHH
Q 046030 21 GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLL 100 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 100 (331)
+-..|.|+||.|+..|..-.++.|++.+.+ ++.+|..|+||+|.+...|+...+..++++|++.+. .|.+|.+||
T Consensus 652 ~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a----~~~~~~~~l 726 (785)
T KOG0521|consen 652 VLCIGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRGADPNA----FDPDGKLPL 726 (785)
T ss_pred hhhcccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhccccccccc----cCccCcchh
Confidence 445679999999999999999999999999 999999999999999999999999999999998755 899999999
Q ss_pred HHHHhhCCCCCC
Q 046030 101 HLAAQYSNPKPI 112 (331)
Q Consensus 101 HlAa~~g~~~~~ 112 (331)
++|....+.+++
T Consensus 727 ~~a~~~~~~d~~ 738 (785)
T KOG0521|consen 727 DIAMEAANADIV 738 (785)
T ss_pred hHHhhhccccHH
Confidence 999888666654
No 105
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.94 E-value=6e-06 Score=76.76 Aligned_cols=66 Identities=18% Similarity=0.177 Sum_probs=60.6
Q ss_pred ecccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhh
Q 046030 16 VSIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEI 81 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~ 81 (331)
.+++.+|.+.+|+||+||..|+++++++|++.+....+.+|.-|+|||--|...+|.+++++|-+.
T Consensus 530 ~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 530 MDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEA 595 (622)
T ss_pred ccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHH
Confidence 347788999999999999999999999999988877889999999999999999999999998764
No 106
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.93 E-value=7.2e-06 Score=77.91 Aligned_cols=84 Identities=18% Similarity=0.176 Sum_probs=69.7
Q ss_pred HHHHHHhcCcHHHHHHHHHhCCCc-c--cccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHH
Q 046030 28 QPLQNAHSGNFKFLAVLIRSYPDL-V--HELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAA 104 (331)
Q Consensus 28 ~Lh~Aa~~G~~~~v~~Ll~~~~~~-~--~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa 104 (331)
-|.-|....++..+-.|+.++... . ..-+.+|+|+||+||..|+..+.++|+..|.+... +|.+|+|+|.||-
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~----rda~g~t~l~yar 702 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMA----RDAHGRTALFYAR 702 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcccee----cccCCchhhhhHh
Confidence 466788888888888898876531 1 22367889999999999999999999999998654 9999999999999
Q ss_pred hhCCCCCCCCC
Q 046030 105 QYSNPKPISKV 115 (331)
Q Consensus 105 ~~g~~~~~~~l 115 (331)
+.|..++++.|
T Consensus 703 ~a~sqec~d~l 713 (749)
T KOG0705|consen 703 QAGSQECIDVL 713 (749)
T ss_pred hcccHHHHHHH
Confidence 99998877655
No 107
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.69 E-value=3e-05 Score=78.77 Aligned_cols=78 Identities=19% Similarity=0.246 Sum_probs=68.6
Q ss_pred cCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc
Q 046030 57 EEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV 136 (331)
Q Consensus 57 ~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~ 136 (331)
..|.|+||.|+..+....+++|++.|++. |..|..|+||||.+...|+.....++ +.
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~v----n~~d~~g~~plh~~~~~g~~~~~~~l-------------------l~ 710 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADV----NALDSKGRTPLHHATASGHTSIACLL-------------------LK 710 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcc----hhhhccCCCcchhhhhhcccchhhhh-------------------cc
Confidence 35799999999999999999999999984 66999999999999999998766543 34
Q ss_pred CcccccccccCCCCchhchHH
Q 046030 137 KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 137 ~~~~~~~~n~~G~Tpl~la~~ 157 (331)
++++.++.|.+|++|+++|.+
T Consensus 711 ~~a~~~a~~~~~~~~l~~a~~ 731 (785)
T KOG0521|consen 711 RGADPNAFDPDGKLPLDIAME 731 (785)
T ss_pred ccccccccCccCcchhhHHhh
Confidence 789999999999999999854
No 108
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.64 E-value=0.0001 Score=60.97 Aligned_cols=68 Identities=16% Similarity=0.076 Sum_probs=62.1
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCc
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFS 84 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~ 84 (331)
.||..|..|+|++..|+..|..+.+.+|+.++...+...|..|.+++.+|-+.|..+++..|-+...+
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e 71 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE 71 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence 47889999999999999999999999999999555899999999999999999999999999876443
No 109
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.64 E-value=0.00013 Score=66.32 Aligned_cols=60 Identities=20% Similarity=0.249 Sum_probs=55.5
Q ss_pred CCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchh
Q 046030 26 SPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKE 86 (331)
Q Consensus 26 ~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~ 86 (331)
.--|..||+.|+.+.|+.|++.+-+ +|.+|....+||.+|+..||.++|++|+++|+-++
T Consensus 37 f~elceacR~GD~d~v~~LVetgvn-VN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~ 96 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVN-VNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS 96 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCC-cchhhcccccHHHHHHHcCcHHHHHHHHHcCCccc
Confidence 3458899999999999999999888 89999999999999999999999999999998654
No 110
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.36 E-value=4.9e-05 Score=77.19 Aligned_cols=117 Identities=19% Similarity=0.065 Sum_probs=79.5
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHh-CCCcccccccCCccHHHHHHHcCCHHHHHHHH-hhCCchhhhhhhcccCCC
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRS-YPDLVHELDEEDRSIFHIAVMHRHAETFKLIY-EIGFSKELIATYVDKSGN 97 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~-~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll-~~~~~~~~~in~~d~~G~ 97 (331)
...-.|++-+|.++..|..-.++.+++. +.. ....|.+|...+|+++. ++.+..-++. ..|... +-+|..|+
T Consensus 569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~-~~eld~d~qgV~hfca~-lg~ewA~ll~~~~~~ai----~i~D~~G~ 642 (975)
T KOG0520|consen 569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSG-DLELDRDGQGVIHFCAA-LGYEWAFLPISADGVAI----DIRDRNGW 642 (975)
T ss_pred cCCCcchHHHHHHHHHhHHHHHHHHhcccccC-chhhcccCCChhhHhhh-cCCceeEEEEeeccccc----ccccCCCC
Confidence 3445689999999999999999999985 333 45678899999999554 4555544443 345443 44999999
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcc--cccccccCCCCchhchHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPS--FKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~--~~~~~n~~G~Tpl~la~~ 157 (331)
||||+|+..|+..++..+. ... -.++. ++...+-.|.|+-+++..
T Consensus 643 tpL~wAa~~G~e~l~a~l~----~lg-----------a~~~~~tdps~~~p~g~ta~~la~s 689 (975)
T KOG0520|consen 643 TPLHWAAFRGREKLVASLI----ELG-----------ADPGAVTDPSPETPGGKTAADLARA 689 (975)
T ss_pred cccchHhhcCHHHHHHHHH----Hhc-----------cccccccCCCCCCCCCCchhhhhhc
Confidence 9999999999976543320 000 01122 223344568999999853
No 111
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.32 E-value=8.1e-05 Score=75.69 Aligned_cols=99 Identities=12% Similarity=0.076 Sum_probs=77.3
Q ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhh--hhcccCCCc
Q 046030 21 GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIA--TYVDKSGNN 98 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~i--n~~d~~G~T 98 (331)
.|.+|...+|. |..++.+..-+++......++.+|.+||||||+|+..|+..++..|++.|++..... +..+-.|.|
T Consensus 604 ld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~t 682 (975)
T KOG0520|consen 604 LDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKT 682 (975)
T ss_pred hcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCc
Confidence 45566677777 666777887777776666689999999999999999999999999998887665432 223446999
Q ss_pred HHHHHHhhCCCCCCCCCCCcHH
Q 046030 99 LLHLAAQYSNPKPISKVPGAAL 120 (331)
Q Consensus 99 pLHlAa~~g~~~~~~~l~~~~l 120 (331)
+-.+|..+|+..+..+|...++
T Consensus 683 a~~la~s~g~~gia~~lse~~L 704 (975)
T KOG0520|consen 683 AADLARANGHKGIAGYLSEKAL 704 (975)
T ss_pred hhhhhhcccccchHHHHhhhHH
Confidence 9999999999887766644433
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.08 E-value=0.00023 Score=59.02 Aligned_cols=59 Identities=15% Similarity=0.122 Sum_probs=52.6
Q ss_pred ccccccCCccHHHHHHHcCCHHHHHHHHhhC-CchhhhhhhcccCCCcHHHHHHhhCCCCCCCC
Q 046030 52 VHELDEEDRSIFHIAVMHRHAETFKLIYEIG-FSKELIATYVDKSGNNLLHLAAQYSNPKPISK 114 (331)
Q Consensus 52 ~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~-~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~ 114 (331)
++.+|..|||+++.|+..|+.+.+.||+.+| +.+.. .|..|++++.+|-+.|..+.+..
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv----~d~ssldaaqlaek~g~~~fvh~ 64 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGV----TDESSLDAAQLAEKGGAQAFVHS 64 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccc----cccccchHHHHHHhcChHHHHHH
Confidence 7889999999999999999999999999999 66544 89999999999999998765443
No 113
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.04 E-value=0.00046 Score=68.98 Aligned_cols=92 Identities=18% Similarity=0.151 Sum_probs=65.4
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCC---cccccccCCccHHHHHHHcCCHHHHHHHHhhCCch---------------
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPD---LVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSK--------------- 85 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~---~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~--------------- 85 (331)
.+.-....|+..|+...|+..++.... .++.+|.-|+++||+|..+.+.++.++|++.+...
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v~~ 103 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEEGDALLLAIAVGSVPL 103 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccccchHHHHHHHHHHHHH
Confidence 344567788888888888888875543 25777888888888888888888888888765211
Q ss_pred -hhhhhh----------------cccCCCcHHHHHHhhCCCCCCCCC
Q 046030 86 -ELIATY----------------VDKSGNNLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 86 -~~~in~----------------~d~~G~TpLHlAa~~g~~~~~~~l 115 (331)
+.+++. .-..+-|||.+||..++.+|+++|
T Consensus 104 VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~L 150 (822)
T KOG3609|consen 104 VELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCL 150 (822)
T ss_pred HHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHH
Confidence 111111 112467999999999999888765
No 114
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.43 E-value=0.005 Score=33.66 Aligned_cols=24 Identities=29% Similarity=0.502 Sum_probs=11.6
Q ss_pred CccHHHHHHHcCCHHHHHHHHhhC
Q 046030 59 DRSIFHIAVMHRHAETFKLIYEIG 82 (331)
Q Consensus 59 G~t~LH~Aa~~g~~~iv~~Ll~~~ 82 (331)
|.||+|+|+..++.++++.+++.+
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~ 25 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKG 25 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 344555555555555555444443
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.22 E-value=0.0074 Score=32.90 Aligned_cols=27 Identities=19% Similarity=0.272 Sum_probs=24.5
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCC
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPD 50 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~ 50 (331)
+|.||+|+|+..|+.++++.|++.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 368999999999999999999998775
No 116
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.94 E-value=0.0092 Score=56.49 Aligned_cols=63 Identities=17% Similarity=0.133 Sum_probs=49.5
Q ss_pred HHHHHHHHHhCCCc-----ccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHH
Q 046030 38 FKFLAVLIRSYPDL-----VHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAA 104 (331)
Q Consensus 38 ~~~v~~Ll~~~~~~-----~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa 104 (331)
.+.++.|.+..-+. .+..|..--|+||+|+.+|..++|.++++.|+|+.. +|..|.||..+++
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~----kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST----KDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh----cccCCCCcccccc
Confidence 45566666654442 133455577999999999999999999999998776 9999999998877
No 117
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.23 E-value=0.072 Score=49.03 Aligned_cols=62 Identities=15% Similarity=0.134 Sum_probs=49.2
Q ss_pred CCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCC
Q 046030 48 YPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 48 ~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l 115 (331)
.|......+.. --|-.||+.|..+.|++|++.|.+ +|++|...+.||.+|+..||.+.+++|
T Consensus 27 ~~s~~~~~~~f--~elceacR~GD~d~v~~LVetgvn----VN~vD~fD~spL~lAsLcGHe~vvklL 88 (516)
T KOG0511|consen 27 KPSVPLKKVPF--GELCEACRAGDVDRVRYLVETGVN----VNAVDRFDSSPLYLASLCGHEDVVKLL 88 (516)
T ss_pred CcccccccCch--HHHHHHhhcccHHHHHHHHHhCCC----cchhhcccccHHHHHHHcCcHHHHHHH
Confidence 34433333443 358899999999999999998877 477999999999999999998876554
No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.05 E-value=0.059 Score=51.20 Aligned_cols=42 Identities=17% Similarity=0.136 Sum_probs=39.5
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHH
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAV 67 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa 67 (331)
-.|+||+|+.+|..++|.++|+.+.| +..+|..|+||..++.
T Consensus 430 tsT~LH~aa~qg~~k~v~~~Leeg~D-p~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 430 TSTFLHYAAAQGARKCVKYFLEEGCD-PSTKDGAGRTPYSLSA 471 (591)
T ss_pred cchHHHHHHhcchHHHHHHHHHhcCC-chhcccCCCCcccccc
Confidence 57999999999999999999999988 7899999999999987
No 119
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=93.07 E-value=0.094 Score=53.03 Aligned_cols=30 Identities=13% Similarity=0.134 Sum_probs=26.1
Q ss_pred cCCccHHHHHHHcCCHHHHHHHHhhCCchh
Q 046030 57 EEDRSIFHIAVMHRHAETFKLIYEIGFSKE 86 (331)
Q Consensus 57 ~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~ 86 (331)
.-+-||+.+||..++.||++.|+++|+...
T Consensus 129 t~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 129 TPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred CCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 347899999999999999999999887543
No 120
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=86.14 E-value=1.6 Score=30.96 Aligned_cols=49 Identities=14% Similarity=0.188 Sum_probs=40.4
Q ss_pred CCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhC
Q 046030 26 SPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIG 82 (331)
Q Consensus 26 ~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~ 82 (331)
..-+..|...|+.|+++.+++.+.. | ...+..|+...+.+++++|++.-
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~~~-----~---~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKNKP-----D---NDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHhcc-----H---HHHHHHHHHHhhHHHHHHHHHhc
Confidence 3468999999999999999875421 1 46799999999999999999863
No 121
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=82.44 E-value=0.79 Score=38.67 Aligned_cols=54 Identities=17% Similarity=0.154 Sum_probs=43.3
Q ss_pred ccccCCccHHHHHHHcCCHHHHH-HHHhhCCchhhhhhhcccCCCcHHHHHHhhC
Q 046030 54 ELDEEDRSIFHIAVMHRHAETFK-LIYEIGFSKELIATYVDKSGNNLLHLAAQYS 107 (331)
Q Consensus 54 ~~d~~G~t~LH~Aa~~g~~~iv~-~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g 107 (331)
..|.+-.+|||-|+.-++.+++- |+++..+....++|..|.+|..+|.+|....
T Consensus 217 lId~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~ 271 (280)
T KOG4591|consen 217 LIDGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCRE 271 (280)
T ss_pred HHcCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHH
Confidence 34677789999999999998874 6777777666667999999999999987643
No 122
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=73.97 E-value=5.7 Score=33.27 Aligned_cols=44 Identities=16% Similarity=0.163 Sum_probs=27.3
Q ss_pred HHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHH
Q 046030 29 PLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIY 79 (331)
Q Consensus 29 Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll 79 (331)
|..|+.+|-.+.+.+.++++.+ ++ .++|-.|+.++|.+++.+++
T Consensus 147 l~~a~~kgll~F~letlkygg~-~~------~~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 147 LEKAAAKGLLPFVLETLKYGGN-VD------IIVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHCCCHHHHHHHHHcCCc-cc------HHHHHHHHHhhHHHHHHHhh
Confidence 4566666666666666666655 11 15666666666666666654
No 123
>PF07344 Amastin: Amastin surface glycoprotein; InterPro: IPR009944 This family contains the eukaryotic surface glycoprotein amastin (approximately 180 residues long).In Trypanosoma cruzi, amastin is particularly abundant during the amastigote stage.
Probab=59.84 E-value=60 Score=26.39 Aligned_cols=44 Identities=9% Similarity=0.033 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCCceehhhHHHHH
Q 046030 255 FKLILGLLSLFIALTAMMLSFSSNFFLAYR-DRINCFSMLPIILV 298 (331)
Q Consensus 255 ~~~~~~~~~~~~s~~~~~~af~~~~~~v~~-~~~~~~~~~~~~~~ 298 (331)
.++..+-.+-++|+....+||..|..+... +..+|+..+..+++
T Consensus 60 ~~f~aa~afaIisi~~~~~a~v~g~~~l~~~~~~r~v~l~L~~~~ 104 (155)
T PF07344_consen 60 SRFRAAQAFAIISIFVYGAAFVLGVLLLCCCSCLRWVCLVLNIVG 104 (155)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 345566677788888888888888888877 55677655444443
No 124
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=56.11 E-value=43 Score=28.03 Aligned_cols=29 Identities=21% Similarity=0.383 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhhcchhh
Q 046030 216 IFVMSEAIAFSCSCISMLM-FLSILITSRYR 245 (331)
Q Consensus 216 ~F~~~~~~a~~~S~~~~~~-~~~~~~~~~~~ 245 (331)
-|.++|.+|..+.+.+|.. ...++ .||+-
T Consensus 39 eY~vsNiisv~Sgll~I~~GI~AIv-lSrnl 68 (188)
T PF12304_consen 39 EYAVSNIISVTSGLLSIICGIVAIV-LSRNL 68 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHhHHHHh-hhccC
Confidence 4678999999999988876 33444 66643
No 125
>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569. This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.
Probab=41.12 E-value=2e+02 Score=23.43 Aligned_cols=30 Identities=30% Similarity=0.427 Sum_probs=25.9
Q ss_pred cccccCcchhHHHHHHHHHHHHHHHHHHHH
Q 046030 205 TPNFHSKIWFHIFVMSEAIAFSCSCISMLM 234 (331)
Q Consensus 205 ~p~~~~~~~f~~F~~~~~~a~~~S~~~~~~ 234 (331)
+....+.++|+.|+..|.++..-|+.++..
T Consensus 35 ~a~f~d~~af~y~v~anai~~~Ysll~l~~ 64 (154)
T TIGR01569 35 KAKFSDLPAFVYFVVANAIACGYSLLSLVV 64 (154)
T ss_pred eeeeeccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456678899999999999999999988764
No 126
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=40.03 E-value=30 Score=27.22 Aligned_cols=19 Identities=16% Similarity=0.188 Sum_probs=11.3
Q ss_pred ceehhhHHHHHHHHHHHHH
Q 046030 288 NCFSMLPIILVFLPVALYL 306 (331)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~ 306 (331)
+|+++++.+++.+.+++++
T Consensus 1 RW~l~~iii~~i~l~~~~~ 19 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLF 19 (130)
T ss_pred CeeeHHHHHHHHHHHHHHH
Confidence 6888777666554444333
No 127
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=40.00 E-value=3.4e+02 Score=25.94 Aligned_cols=22 Identities=18% Similarity=0.212 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHhhhcCCCCC
Q 046030 178 SIVATLAIAGVFQAAFTLPGGT 199 (331)
Q Consensus 178 ~iva~Liatvtfaa~~t~PgG~ 199 (331)
++|+-|.+-.+-+.++.+.|++
T Consensus 119 tvvgfla~i~a~~lg~~p~~~~ 140 (441)
T KOG3788|consen 119 TVVGFLAAIAAIALGIIPEGDF 140 (441)
T ss_pred HHHHHHHHHHHHHhccCccCCC
Confidence 4555555555555666665655
No 128
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=37.77 E-value=20 Score=30.52 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=36.9
Q ss_pred CCCCCHHHHHHhcCcHHHHHH-HHH---hCCCcccccccCCccHHHHHHHcCC
Q 046030 23 AANSPQPLQNAHSGNFKFLAV-LIR---SYPDLVHELDEEDRSIFHIAVMHRH 71 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~-Ll~---~~~~~~~~~d~~G~t~LH~Aa~~g~ 71 (331)
.+...|||-|++-|+.+++-. +++ +-|...+..|.+|..+|-+|-....
T Consensus 220 ~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~~ 272 (280)
T KOG4591|consen 220 GKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCREL 272 (280)
T ss_pred CCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHHH
Confidence 344679999999999887754 444 3455568889999999999876543
No 129
>TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA). The article in Microb Comp Genomics 1998;3(3):151-69 (Medline:98448512) discusses this family and suggests that some members may have functions other than Mg2+ transport.
Probab=37.30 E-value=97 Score=28.22 Aligned_cols=28 Identities=11% Similarity=0.200 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHh----hcCCCcee
Q 046030 262 LSLFIALTAMMLSFSSNFFLA----YRDRINCF 290 (331)
Q Consensus 262 ~~~~~s~~~~~~af~~~~~~v----~~~~~~~~ 290 (331)
.+..+|+..+..+|++|+|=+ +|. ..|.
T Consensus 260 ~LTvvt~IflP~t~IaGiyGMNf~~mP~-l~~~ 291 (318)
T TIGR00383 260 ILTVVSTIFIPLTFIAGIYGMNFKFMPE-LNWK 291 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccCcc-ccch
Confidence 457789999999999999974 555 3553
No 130
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=36.90 E-value=2e+02 Score=23.90 Aligned_cols=43 Identities=16% Similarity=0.147 Sum_probs=28.4
Q ss_pred HHhHHhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046030 277 SNFFLAYRDRINCFSMLPIILVFLPVALYLLLQCRLMGDILYS 319 (331)
Q Consensus 277 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (331)
..+|..+.-+++-+.+..+++=.+.++.|.+.++|+=.+.++.
T Consensus 123 ~Tly~al~~ks~iLtllf~ilq~laliwYslSyiP~g~~gv~~ 165 (175)
T KOG2887|consen 123 LTLYVALWLKSKILTLLFCILQVLALIWYSLSYIPFGRSGVSK 165 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHH
Confidence 3334333344556667777777778888999999986665543
No 131
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=34.62 E-value=1.2e+02 Score=23.22 Aligned_cols=41 Identities=15% Similarity=0.321 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCCceehhhHHHHHHHHHHHH
Q 046030 258 ILGLLSLFIALTAMMLSFSSNFFLAYRDRINCFSMLPIILVFLPVALY 305 (331)
Q Consensus 258 ~~~~~~~~~s~~~~~~af~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 305 (331)
.|++.++++++..|.+ |+ +..+ .+|+.....+++.+.++..
T Consensus 13 ~~al~lif~g~~vmy~----gi--~f~~-~~~im~ifmllG~L~~l~S 53 (114)
T PF11023_consen 13 TFALSLIFIGMIVMYI----GI--FFKA-SPIIMVIFMLLGLLAILAS 53 (114)
T ss_pred HHHHHHHHHHHHHHhh----hh--hhcc-cHHHHHHHHHHHHHHHHHH
Confidence 4788788888777765 32 2233 4666655555554443333
No 132
>PRK02935 hypothetical protein; Provisional
Probab=33.46 E-value=1.6e+02 Score=22.26 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCCceehhhHHHHHH
Q 046030 258 ILGLLSLFIALTAMMLSFSSNFFLAYRDRINCFSMLPIILVF 299 (331)
Q Consensus 258 ~~~~~~~~~s~~~~~~af~~~~~~v~~~~~~~~~~~~~~~~~ 299 (331)
.|++.++++++..|.+. ++ .+.++|......+++.
T Consensus 14 t~aL~lvfiG~~vMy~G----if---f~~~~~~m~ifm~~G~ 48 (110)
T PRK02935 14 TFALSLVFIGFIVMYLG----IF---FRESIIIMTIFMLLGF 48 (110)
T ss_pred HHHHHHHHHHHHHHHHH----HH---hcccHHHHHHHHHHHH
Confidence 47888888888777554 21 2445555544444443
No 133
>PRK09546 zntB zinc transporter; Reviewed
Probab=31.66 E-value=1.3e+02 Score=27.55 Aligned_cols=20 Identities=15% Similarity=0.245 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHhHH
Q 046030 262 LSLFIALTAMMLSFSSNFFL 281 (331)
Q Consensus 262 ~~~~~s~~~~~~af~~~~~~ 281 (331)
++.++++.++..+|++|+|=
T Consensus 266 ~Ltilt~IflPlT~IaGiyG 285 (324)
T PRK09546 266 TMSLMAMVFLPTTFLTGLFG 285 (324)
T ss_pred HHHHHHHHHHHHHHHHhhhc
Confidence 45678889999999999997
No 134
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=31.60 E-value=1e+02 Score=26.93 Aligned_cols=88 Identities=11% Similarity=0.104 Sum_probs=51.2
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCC----CcccccccCCccHHHHHHHc--CCHHHHHHHHhhCCc-hhhhhhhcccCCC
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYP----DLVHELDEEDRSIFHIAVMH--RHAETFKLIYEIGFS-KELIATYVDKSGN 97 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~----~~~~~~d~~G~t~LH~Aa~~--g~~~iv~~Ll~~~~~-~~~~in~~d~~G~ 97 (331)
-.+++-+|..++..+++..|++... |.+.... +.--+-++-.. -...++++.+++|-- ++. --.+-+.|.
T Consensus 179 A~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~--~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~-~F~~~NSGd 255 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEK--ELYDIEYLLSEHSASYKVLEYFINRGLVDVNK-KFQKVNSGD 255 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhhcceecchhhhcCc--chhhHHHHHhhcCCcHHHHHHHHhccccccch-hhhccCCcc
Confidence 3577888888888888888887532 2222111 22234444332 345677777777642 111 122556788
Q ss_pred cHHHHHHhhCCCCCCCCC
Q 046030 98 NLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l 115 (331)
|-|.-|.++++.+.+..|
T Consensus 256 tMLDNA~Ky~~~emi~~L 273 (284)
T PF06128_consen 256 TMLDNAMKYKNSEMIAFL 273 (284)
T ss_pred hHHHhHHhcCcHHHHHHH
Confidence 888888888777765543
No 135
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase. Members of this protein family have a novel N-terminal domain, a single predicted membrane-spanning helix, and a predicted cystosolic histidine kinase domain. We designate this protein PrsK, and its companion DNA-binding response regulator protein (TIGR02915) PrsR. These predicted signal-transducing proteins appear to enable enhancer-dependent transcriptional activation. The prsK gene is often associated with exopolysaccharide biosynthesis genes.
Probab=30.80 E-value=5.8e+02 Score=26.03 Aligned_cols=16 Identities=13% Similarity=0.079 Sum_probs=7.4
Q ss_pred hhhHHHHHHHHHHHHH
Q 046030 252 LLPFKLILGLLSLFIA 267 (331)
Q Consensus 252 ~l~~~~~~~~~~~~~s 267 (331)
.+.+.+.+....++++
T Consensus 223 ~~sr~~~~~~~~~~~~ 238 (679)
T TIGR02916 223 AVSREMAFHSATLLGA 238 (679)
T ss_pred eechHHHHHHHHHHHH
Confidence 3445555554434333
No 136
>PF07062 Clc-like: Clc-like; InterPro: IPR010761 Clc proteins are a nine-member gene family of chloride channels that have diverse roles in the plasma membrane and in intracellular organelles, especially membrane excitability and the maintenance of osmotic balance [, ]. This family contains a number of Clc-like proteins that are approximately 250 residues long and their homologues. ; GO: 0016021 integral to membrane
Probab=29.47 E-value=1.8e+02 Score=25.18 Aligned_cols=65 Identities=12% Similarity=0.197 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHhhcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 046030 215 HIFVMSEAIAFSCSCISMLMFL--SILITSRYRENDFLKLLPFKLILGLLSLFIALTAMMLSFSSNFF 280 (331)
Q Consensus 215 ~~F~~~~~~a~~~S~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~af~~~~~ 280 (331)
.+|.+...+|.++|+++..+|. +..+.+|+-.. ....-+++.=+++.+...+....+.||+.++.
T Consensus 136 i~~~v~~~ia~l~S~~g~~iF~~~a~~~d~r~~~g-~~~tYeq~~G~afYl~~~g~l~~~~a~l~sv~ 202 (211)
T PF07062_consen 136 IFYTVLVFIAALLSLIGLGIFFFNAHMVDNRFVQG-IVGTYEQHYGYAFYLHLAGSLLLLFAFLFSVF 202 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeec-ccceEEEeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777778888888888876644 33323333211 11111233345555555555555666665544
No 137
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.08 E-value=1.8e+02 Score=21.03 Aligned_cols=50 Identities=18% Similarity=0.104 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcC
Q 046030 216 IFVMSEAIAFSCSCISMLMFLSILITSRYRENDFLKLLPFKLILGLLSLFIALTAMMLSFSSNFFLAYRD 285 (331)
Q Consensus 216 ~F~~~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~af~~~~~~v~~~ 285 (331)
+++++|.+||..|.....+ |+. .. ..|. -. =...+|.++|.+|+.+.+..
T Consensus 15 awi~f~waafg~s~~m~~~--gi~-~l---PVD~----w~----------KGy~~MG~lfltgSt~tL~K 64 (95)
T COG4298 15 AWIMFNWAAFGASYFMLGL--GIW-LL---PVDL----WT----------KGYWAMGILFLTGSTVTLVK 64 (95)
T ss_pred hhHhHHHHHHHHHHHHHHH--Hhh-ee---chHH----HH----------HHHHHHHHHHHhcchhhhhH
Confidence 5678899999999875543 332 11 1121 11 13446777788887776654
No 138
>PF10966 DUF2768: Protein of unknown function (DUF2768); InterPro: IPR020076 This entry contains proteins with no known function.
Probab=28.25 E-value=1.1e+02 Score=20.58 Aligned_cols=19 Identities=26% Similarity=0.417 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHhHHhhc
Q 046030 266 IALTAMMLSFSSNFFLAYR 284 (331)
Q Consensus 266 ~s~~~~~~af~~~~~~v~~ 284 (331)
+|..+|..=|.+.....++
T Consensus 4 iS~~~iglMfisv~~i~~s 22 (58)
T PF10966_consen 4 ISFGAIGLMFISVILIYFS 22 (58)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 3444444444444333333
No 139
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=27.50 E-value=2.8e+02 Score=21.38 Aligned_cols=21 Identities=19% Similarity=0.089 Sum_probs=14.0
Q ss_pred CceehhhHHHHHHHHHHHHHH
Q 046030 287 INCFSMLPIILVFLPVALYLL 307 (331)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~ 307 (331)
..|..+++.+++++|=+....
T Consensus 75 ~~~~llilG~L~fIPG~Y~~~ 95 (115)
T PF05915_consen 75 RGWALLILGILCFIPGFYHTR 95 (115)
T ss_pred ccchHHHHHHHHHhccHHHHH
Confidence 356667777777777666544
No 140
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=26.28 E-value=1.2e+02 Score=22.69 Aligned_cols=32 Identities=13% Similarity=0.218 Sum_probs=20.5
Q ss_pred ceehhhHHHH--HHHHHHHHHHHHHHHHHHHHHH
Q 046030 288 NCFSMLPIIL--VFLPVALYLLLQCRLMGDILYS 319 (331)
Q Consensus 288 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 319 (331)
.|...+-+++ .++.+++++...||+|...+.|
T Consensus 16 sW~~LVGVv~~al~~SlLIalaaKC~~~~k~~~S 49 (102)
T PF15176_consen 16 SWPFLVGVVVTALVTSLLIALAAKCPVWYKYLAS 49 (102)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 6655332222 3346667777899999998765
No 141
>PF11137 DUF2909: Protein of unknown function (DUF2909); InterPro: IPR021313 This is a family of proteins conserved in Proteobacteria of unknown function.
Probab=26.17 E-value=2.2e+02 Score=19.43 Aligned_cols=59 Identities=17% Similarity=0.326 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 046030 215 HIFVMSEAIAFSCSCISMLMFLSILITSRYRENDFLKLLPFKLILGLLSLFIALTAMMLSFSSNFF 280 (331)
Q Consensus 215 ~~F~~~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~af~~~~~ 280 (331)
|+.++.=-++.+.|+.+.+.|+ +..+-......++|..|+.++. .-+..++.++.+|..
T Consensus 2 Ki~iv~lll~ii~sL~saL~~l---~kd~~~~~rm~~~L~~RV~lS~----~l~~lil~~~~~G~i 60 (63)
T PF11137_consen 2 KILIVLLLLAIIASLFSALFFL---VKDKGSSKRMVKALGRRVGLSA----LLFLLILIALYTGWI 60 (63)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH---hhCCCCCchHHHHHHHHHHHHH----HHHHHHHHHHHhCCC
Confidence 3444555566666777665544 1222222333445555554332 233345556666543
No 142
>PF11241 DUF3043: Protein of unknown function (DUF3043); InterPro: IPR021403 Some members in this family of proteins with unknown function are annotated as membrane proteins. This cannot be confirmed.
Probab=25.62 E-value=2.7e+02 Score=23.17 Aligned_cols=20 Identities=30% Similarity=0.413 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 046030 257 LILGLLSLFIALTAMMLSFS 276 (331)
Q Consensus 257 ~~~~~~~~~~s~~~~~~af~ 276 (331)
..++-.+|.++++.+++.|+
T Consensus 75 ~~i~e~fmP~alv~lv~~~v 94 (170)
T PF11241_consen 75 RNIGEFFMPVALVLLVLSFV 94 (170)
T ss_pred cchHHHHHHHHHHHHHHHHH
Confidence 34555567777777777776
No 143
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=25.42 E-value=87 Score=27.41 Aligned_cols=48 Identities=15% Similarity=0.185 Sum_probs=30.9
Q ss_pred cHHHHHHHHHhCCCcc---cccccCCccHHHHHHHcCCHHHHHHHHhhCCc
Q 046030 37 NFKFLAVLIRSYPDLV---HELDEEDRSIFHIAVMHRHAETFKLIYEIGFS 84 (331)
Q Consensus 37 ~~~~v~~Ll~~~~~~~---~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~ 84 (331)
+..+++..+++|--.+ ..+-+.|.|-|--|..+++.+++..|++.|+-
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 4455666666543222 23355677788888888888888888777764
No 144
>COG0581 PstA ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]
Probab=25.11 E-value=2.2e+02 Score=25.95 Aligned_cols=54 Identities=20% Similarity=0.253 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHhHHhhcCCCceeh----hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 046030 264 LFIALTAMMLSFSSNFFLAYRDRINCFS----MLPIILVFLPVALYLLLQCRLMGDIL 317 (331)
Q Consensus 264 ~~~s~~~~~~af~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (331)
+...+.++.+...+|+|+.-..+.+|.. +.+-.++++|..+|-++.+-+|...+
T Consensus 81 ~~~~li~~PiGv~aaIYL~EYa~~~~~t~~ir~~i~~La~vPSIV~GLFg~~~fV~~~ 138 (292)
T COG0581 81 LLAILIGVPLGIGAGIYLAEYAKKSRLTKVIRFAIDILASVPSIVYGLFGLGFFVVTL 138 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 4456777788888888887666444532 34445677777777666665555443
No 145
>PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ]. CorA is virtually ubiquitous in the Bacteria and Archaea. There are also eukaryotic relatives of this protein. Transporter ZntB mediates efflux of zinc ions [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 2HN1_A 3NWI_D 3NVO_B 3CK6_A 2IUB_E 2BBJ_E 2HN2_A 2BBH_A.
Probab=24.77 E-value=1.1e+02 Score=27.12 Aligned_cols=21 Identities=14% Similarity=0.238 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHh
Q 046030 262 LSLFIALTAMMLSFSSNFFLA 282 (331)
Q Consensus 262 ~~~~~s~~~~~~af~~~~~~v 282 (331)
.+.+++++.+.++|++|+|-+
T Consensus 236 ~LT~~t~iflPlt~i~g~fGM 256 (292)
T PF01544_consen 236 VLTIVTAIFLPLTFITGIFGM 256 (292)
T ss_dssp HHHHHHHHHHHHHHHTTSTTS
T ss_pred HHHHHHHHHHHHHHHHHHhhC
Confidence 356778888999999999976
No 146
>PF10011 DUF2254: Predicted membrane protein (DUF2254); InterPro: IPR018723 Members of this family of proteins comprises various hypothetical and putative membrane proteins. Their exact function, has not, as yet, been defined.
Probab=24.71 E-value=5.9e+02 Score=23.93 Aligned_cols=19 Identities=16% Similarity=0.030 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHhhhcCC
Q 046030 178 SIVATLAIAGVFQAAFTLP 196 (331)
Q Consensus 178 ~iva~Liatvtfaa~~t~P 196 (331)
.++|.+.+.++...--..|
T Consensus 13 ~~~av~la~~~~~ld~~~~ 31 (371)
T PF10011_consen 13 AVLAVVLAFLTPYLDRLLP 31 (371)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 3445555555544444444
No 147
>PF15339 Afaf: Acrosome formation-associated factor
Probab=23.94 E-value=1.5e+02 Score=24.49 Aligned_cols=35 Identities=26% Similarity=0.454 Sum_probs=27.1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcC
Q 046030 251 KLLPFKLILGLLSLFIALTAMMLSFSSNFFLAYRD 285 (331)
Q Consensus 251 ~~l~~~~~~~~~~~~~s~~~~~~af~~~~~~v~~~ 285 (331)
..++.||+.|..+|-+-++..++||+.|..--+..
T Consensus 126 e~~KlkLmLGIsLmTl~lfv~Ll~~c~atlyklk~ 160 (200)
T PF15339_consen 126 EELKLKLMLGISLMTLFLFVILLAFCSATLYKLKH 160 (200)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35677899998888888888889999887655543
No 148
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=23.21 E-value=4.7e+02 Score=22.20 Aligned_cols=16 Identities=25% Similarity=0.216 Sum_probs=9.2
Q ss_pred ccccccCCCCchhchHH
Q 046030 141 KEMKNNDGKTPWELFTA 157 (331)
Q Consensus 141 ~~~~n~~G~Tpl~la~~ 157 (331)
..+++--| +|-+.|.+
T Consensus 46 ~tA~~lfG-~P~~~a~e 61 (206)
T PF06570_consen 46 KTARQLFG-DPKEYADE 61 (206)
T ss_pred CcHHHHcC-CHHHHHHH
Confidence 45555666 66666544
No 149
>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.
Probab=23.19 E-value=3.9e+02 Score=21.30 Aligned_cols=32 Identities=22% Similarity=0.291 Sum_probs=27.2
Q ss_pred CCcccccCcchhHHHHHHHHHHHHHHHHHHHH
Q 046030 203 KGTPNFHSKIWFHIFVMSEAIAFSCSCISMLM 234 (331)
Q Consensus 203 ~G~p~~~~~~~f~~F~~~~~~a~~~S~~~~~~ 234 (331)
..+....+-++|..++..|.++..-|+..++.
T Consensus 38 ~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~ 69 (149)
T PF04535_consen 38 QFTAKFSDYPAFRYLVAANVIACVYSLLQLVL 69 (149)
T ss_pred ccceeecccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666778889999999999999999988765
No 150
>TIGR00341 conserved hypothetical protein TIGR00341. This conserved hypothetical protein is found so far only in three archaeal genomes and in Streptomyces coelicolor. It shares a hydrophobic uncharacterized domain (see model TIGR00271) of about 180 residues with several eubacterial proteins, including the much longer protein sll1151 of Synechocystis PCC6803.
Probab=22.15 E-value=1.7e+02 Score=27.12 Aligned_cols=29 Identities=10% Similarity=0.220 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhhhh
Q 046030 218 VMSEAIAFSCSCISMLMFLSILITSRYREN 247 (331)
Q Consensus 218 ~~~~~~a~~~S~~~~~~~~~~~~~~~~~~~ 247 (331)
+..|.++...|...++.+.++. +.+|.++
T Consensus 269 ~~~Nl~~I~la~~~vf~~~g~~-p~~~~~~ 297 (325)
T TIGR00341 269 TLINVAGLMAGSLAGVYVYGIR-AYRYYKK 297 (325)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-cchhhhH
Confidence 4559999999988888777776 5555443
No 151
>COG4325 Predicted membrane protein [Function unknown]
Probab=22.09 E-value=7e+02 Score=23.82 Aligned_cols=30 Identities=7% Similarity=0.075 Sum_probs=16.7
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhcCCCCCCC
Q 046030 172 RRAESCSIVATLAIAGVFQAAFTLPGGTKD 201 (331)
Q Consensus 172 ~~~~~~~iva~Liatvtfaa~~t~PgG~~~ 201 (331)
.-.+.+-+..+--+-++.+-+|++|-+-..
T Consensus 33 ~l~~~~WvipA~~vv~al~fgf~L~~~~Rt 62 (464)
T COG4325 33 YLQGAVWVIPAFGVVIALGFGFVLSMIPRT 62 (464)
T ss_pred hhccceeeehHHHHHHHHHHHHhhcccccc
Confidence 334444444455555555667777766543
No 152
>PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional
Probab=22.04 E-value=2.5e+02 Score=25.88 Aligned_cols=28 Identities=0% Similarity=0.037 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHh----hcCCCcee
Q 046030 262 LSLFIALTAMMLSFSSNFFLA----YRDRINCF 290 (331)
Q Consensus 262 ~~~~~s~~~~~~af~~~~~~v----~~~~~~~~ 290 (331)
.+..+++..+..+|++|+|=+ +|. ..|.
T Consensus 258 ~lTv~s~if~pptliagiyGMNf~~mP~-~~~~ 289 (316)
T PRK11085 258 IFSVVSVVFLPPTLVASSYGMNFEFMPE-LKWS 289 (316)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCC-CCCc
Confidence 356789999999999999873 454 4554
No 153
>COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism]
Probab=21.75 E-value=2.1e+02 Score=26.31 Aligned_cols=21 Identities=5% Similarity=0.146 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHh
Q 046030 262 LSLFIALTAMMLSFSSNFFLA 282 (331)
Q Consensus 262 ~~~~~s~~~~~~af~~~~~~v 282 (331)
.+..+|+..+..+|++|+|=+
T Consensus 264 ~LTi~s~iflPpTlIagiyGM 284 (322)
T COG0598 264 ILTIVSTIFLPPTLITGFYGM 284 (322)
T ss_pred HHHHHHHHHHhhHHHHccccc
Confidence 356689999999999999964
No 154
>PF10661 EssA: WXG100 protein secretion system (Wss), protein EssA; InterPro: IPR018920 The Wss (WXG100 protein secretion system) in Staphylococcus aureus seems to be encoded by a locus of eight ORFs, called ess (eSAT-6 secretion system) []. This locus encodes, amongst several other proteins, EssA, a protein predicted to possess one transmembrane domain. Due to its predicted membrane location and its absolute requirement for WXG100 protein secretion, it has been speculated that EssA could form a secretion apparatus in conjunction with YukC and YukAB. Proteins homologous to EssA, YukC, EsaA and YukD were absent from mycobacteria []. Members of this family are associated with type VII secretion of WXG100 family targets in the Firmicutes, but not in the Actinobacteria. This highly divergent protein family consists largely of a central region of highly polar low-complexity sequence containing occasional LF motifs in weak repeats about 17 residues in length, flanked by hydrophobic N- and C-terminal regions.
Probab=21.72 E-value=1e+02 Score=24.88 Aligned_cols=22 Identities=9% Similarity=0.552 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHhHHhhcC
Q 046030 264 LFIALTAMMLSFSSNFFLAYRD 285 (331)
Q Consensus 264 ~~~s~~~~~~af~~~~~~v~~~ 285 (331)
+++++.+++++.+.|+|.++..
T Consensus 121 i~~~i~g~ll~i~~giy~~~r~ 142 (145)
T PF10661_consen 121 ILLSIGGILLAICGGIYVVLRK 142 (145)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5567888899999999998876
No 155
>COG2322 Predicted membrane protein [Function unknown]
Probab=21.15 E-value=4.8e+02 Score=21.62 Aligned_cols=21 Identities=24% Similarity=0.268 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCC
Q 046030 177 CSIVATLAIAGVFQAAFTLPG 197 (331)
Q Consensus 177 ~~iva~Liatvtfaa~~t~Pg 197 (331)
.+.++..+..++-..++.|||
T Consensus 14 vl~~a~va~~~~av~~~~P~g 34 (177)
T COG2322 14 VLGLASVAVVVIAVLAFSPAG 34 (177)
T ss_pred HHHHHHHHHHHHHHHhhCCCC
Confidence 344555555555555566665
No 156
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion. The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].
Probab=21.14 E-value=1.8e+02 Score=24.15 Aligned_cols=12 Identities=8% Similarity=0.077 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHH
Q 046030 219 MSEAIAFSCSCI 230 (331)
Q Consensus 219 ~~~~~a~~~S~~ 230 (331)
+.++++++.+++
T Consensus 6 i~~i~~iilgil 17 (191)
T PF04156_consen 6 IISIILIILGIL 17 (191)
T ss_pred HHHHHHHHHHHH
Confidence 344444444443
No 157
>PF11286 DUF3087: Protein of unknown function (DUF3087); InterPro: IPR021438 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=20.56 E-value=4.9e+02 Score=21.50 Aligned_cols=23 Identities=17% Similarity=0.313 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHhHHhhcC
Q 046030 263 SLFIALTAMMLSFSSNFFLAYRD 285 (331)
Q Consensus 263 ~~~~s~~~~~~af~~~~~~v~~~ 285 (331)
.+..++....++|.+++...++.
T Consensus 21 ~~v~~lai~sl~~s~llI~lFg~ 43 (165)
T PF11286_consen 21 ACVASLAILSLAFSQLLIALFGG 43 (165)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 34455666677888888888876
Done!