Query 046030
Match_columns 331
No_of_seqs 430 out of 2070
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 13:56:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046030.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046030hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 6.3E-24 2.2E-28 176.8 9.2 135 6-164 12-153 (169)
2 3twr_A Tankyrase-2; ankyrin re 99.9 2E-22 6.9E-27 166.0 9.5 123 18-164 35-157 (165)
3 3c5r_A BARD-1, BRCA1-associate 99.9 1.8E-22 6.3E-27 161.3 8.3 114 20-157 5-118 (137)
4 1d9s_A Cyclin-dependent kinase 99.9 9.8E-23 3.3E-27 162.9 6.5 123 17-164 4-128 (136)
5 3aaa_C Myotrophin, protein V-1 99.9 1.5E-22 5.1E-27 158.9 5.8 111 22-156 4-114 (123)
6 4b93_B Ankyrin repeat domain-c 99.9 6.4E-22 2.2E-26 176.9 10.1 137 17-158 78-228 (269)
7 3f6q_A Integrin-linked protein 99.9 1.1E-21 3.7E-26 164.0 10.7 117 18-158 32-148 (179)
8 3v30_A DNA-binding protein rfx 99.9 9.8E-22 3.3E-26 163.0 10.2 127 18-168 29-156 (172)
9 2rfm_A Putative ankyrin repeat 99.9 6.9E-22 2.4E-26 167.0 9.2 144 17-165 27-185 (192)
10 3v31_A Ankyrin repeat family A 99.9 1.1E-21 3.6E-26 162.0 10.1 128 18-170 29-158 (167)
11 1awc_B Protein (GA binding pro 99.8 1E-21 3.5E-26 159.9 7.6 119 21-163 30-149 (153)
12 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.9E-21 6.6E-26 161.1 9.2 123 18-164 40-163 (169)
13 2jab_A H10-2-G3; HER2, darpin, 99.8 6.5E-22 2.2E-26 158.1 5.8 120 21-164 10-130 (136)
14 1bd8_A P19INK4D CDK4/6 inhibit 99.8 8.6E-21 3E-25 154.6 10.2 122 17-164 28-150 (156)
15 1n0r_A 4ANK, 4 ankyrin repeats 99.8 7.2E-21 2.5E-25 148.8 8.8 117 24-164 1-118 (126)
16 1ihb_A P18-INK4C(INK6), cyclin 99.8 4.5E-21 1.5E-25 157.1 7.2 122 17-164 30-154 (162)
17 1yyh_A HN1;, notch 1, ankyrin 99.8 9.3E-21 3.2E-25 167.2 9.4 152 8-164 33-207 (253)
18 1yyh_A HN1;, notch 1, ankyrin 99.8 2.7E-20 9.1E-25 164.3 12.4 147 17-167 82-243 (253)
19 3t8k_A Uncharacterized protein 99.8 2.2E-21 7.4E-26 164.0 5.0 130 23-172 36-179 (186)
20 3aji_A 26S proteasome non-ATPa 99.8 1.7E-20 5.9E-25 162.5 10.5 135 18-157 33-181 (231)
21 3hra_A Ankyrin repeat family p 99.8 1.8E-20 6.1E-25 159.0 10.2 142 17-163 31-194 (201)
22 2f8y_A Notch homolog 1, transl 99.8 2.6E-20 9E-25 160.5 11.1 146 8-157 1-167 (223)
23 1oy3_D Transcription factor in 99.8 1.5E-20 5.1E-25 167.4 9.8 94 18-115 2-97 (282)
24 3b7b_A Euchromatic histone-lys 99.8 3.1E-20 1.1E-24 161.5 11.2 134 20-157 72-219 (237)
25 4gpm_A Engineered protein OR26 99.8 1.1E-20 3.9E-25 157.1 7.9 113 27-163 6-119 (169)
26 3d9h_A CDNA FLJ77766, highly s 99.8 2.6E-20 8.9E-25 167.5 10.8 143 17-164 51-207 (285)
27 1oy3_D Transcription factor in 99.8 9.7E-21 3.3E-25 168.6 7.9 119 17-159 150-269 (282)
28 1s70_B 130 kDa myosin-binding 99.8 3.1E-20 1.1E-24 167.2 11.1 147 17-164 65-281 (299)
29 2rfa_A Transient receptor pote 99.8 1.9E-20 6.6E-25 162.5 9.4 127 18-164 30-171 (232)
30 3aji_A 26S proteasome non-ATPa 99.8 3.1E-20 1.1E-24 160.9 10.7 135 18-157 66-214 (231)
31 1ikn_D Protein (I-kappa-B-alph 99.8 1.5E-20 5.2E-25 163.8 8.4 147 17-164 37-201 (236)
32 2etb_A Transient receptor pote 99.8 1.9E-20 6.6E-25 165.1 9.1 128 20-165 85-239 (256)
33 2f8y_A Notch homolog 1, transl 99.8 4.4E-20 1.5E-24 159.1 11.1 143 18-164 51-208 (223)
34 1bi7_B P16INK4A, MTS1, multipl 99.8 3.1E-21 1.1E-25 157.7 3.6 122 18-164 5-128 (156)
35 3ehr_A Osteoclast-stimulating 99.8 1.9E-21 6.6E-26 168.1 2.4 121 19-163 67-189 (222)
36 3jxi_A Vanilloid receptor-rela 99.8 1.8E-20 6.1E-25 165.6 7.8 133 18-166 86-244 (260)
37 2dzn_A Probable 26S proteasome 99.8 2.6E-20 9E-25 160.9 8.2 135 18-157 64-217 (228)
38 1k1a_A B-cell lymphoma 3-encod 99.8 7.6E-20 2.6E-24 159.2 11.2 91 20-111 41-131 (241)
39 3deo_A Signal recognition part 99.8 4.7E-21 1.6E-25 161.0 3.3 112 22-158 41-153 (183)
40 2xai_A ASB-9, ankyrin repeat a 99.8 4.6E-20 1.6E-24 163.6 9.7 136 24-164 2-151 (261)
41 1k1a_A B-cell lymphoma 3-encod 99.8 3.6E-20 1.2E-24 161.3 8.6 144 17-164 71-233 (241)
42 3v31_A Ankyrin repeat family A 99.8 3.9E-20 1.3E-24 152.5 8.2 111 24-158 2-112 (167)
43 1sw6_A Regulatory protein SWI6 99.8 2.5E-20 8.6E-25 171.0 7.2 95 16-115 121-224 (327)
44 2rfa_A Transient receptor pote 99.8 8.3E-20 2.8E-24 158.5 10.0 127 19-166 69-216 (232)
45 1ycs_B 53BP2, P53BP2; ankyrin 99.8 2.3E-20 8E-25 163.5 5.9 135 7-165 14-157 (239)
46 2l6b_A NR1C; ankyrin, consensu 99.8 1.7E-20 5.8E-25 145.2 4.3 109 20-152 4-112 (115)
47 4hbd_A KN motif and ankyrin re 99.8 5.5E-20 1.9E-24 164.8 8.3 144 18-165 104-268 (276)
48 3ui2_A Signal recognition part 99.8 3E-20 1E-24 163.5 6.2 110 23-157 43-153 (244)
49 2vge_A RELA-associated inhibit 99.8 5.9E-20 2E-24 160.2 8.0 123 19-165 15-141 (229)
50 2pnn_A Transient receptor pote 99.8 6.7E-20 2.3E-24 163.3 8.4 128 21-164 97-250 (273)
51 3b7b_A Euchromatic histone-lys 99.8 1.5E-19 5.2E-24 157.2 10.3 136 17-157 3-153 (237)
52 2dzn_A Probable 26S proteasome 99.8 1.6E-19 5.5E-24 155.9 10.2 136 20-157 31-183 (228)
53 3v30_A DNA-binding protein rfx 99.8 8.9E-20 3E-24 151.1 7.9 111 25-158 2-112 (172)
54 3utm_A Tankyrase-1; tankyrase, 99.8 1.7E-19 5.7E-24 165.4 10.4 93 18-115 51-143 (351)
55 2xai_A ASB-9, ankyrin repeat a 99.8 2.3E-19 7.9E-24 159.0 10.8 139 18-157 29-208 (261)
56 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7E-20 2.4E-24 136.4 6.2 86 24-114 1-86 (93)
57 3ljn_A Hypothetical protein; a 99.8 1.1E-19 3.7E-24 168.7 8.9 132 14-165 127-262 (364)
58 3f6q_A Integrin-linked protein 99.8 1E-19 3.5E-24 151.9 7.7 114 22-158 2-115 (179)
59 3twr_A Tankyrase-2; ankyrin re 99.8 4.3E-20 1.5E-24 152.0 4.9 115 21-158 4-118 (165)
60 3utm_A Tankyrase-1; tankyrase, 99.8 2.7E-19 9.3E-24 164.0 10.4 139 18-157 84-289 (351)
61 3d9h_A CDNA FLJ77766, highly s 99.8 4.6E-19 1.6E-23 159.4 11.0 138 18-156 85-263 (285)
62 3kea_A K1L; tropism, ANK repea 99.8 1.6E-19 5.4E-24 162.5 7.3 89 18-113 24-112 (285)
63 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.7E-19 5.9E-24 149.2 6.6 118 22-163 11-129 (169)
64 1s70_B 130 kDa myosin-binding 99.8 2.8E-19 9.5E-24 160.9 8.2 89 22-115 37-125 (299)
65 2etb_A Transient receptor pote 99.8 1.1E-19 3.8E-24 160.2 5.4 114 21-157 39-181 (256)
66 1bi7_B P16INK4A, MTS1, multipl 99.8 8.6E-20 2.9E-24 149.1 4.0 113 17-154 37-150 (156)
67 3kea_A K1L; tropism, ANK repea 99.8 1.9E-19 6.6E-24 161.9 6.6 115 24-165 61-179 (285)
68 1n11_A Ankyrin; clathrin, BAND 99.8 1E-18 3.4E-23 166.0 11.7 132 20-156 240-385 (437)
69 1awc_B Protein (GA binding pro 99.8 2.7E-19 9.2E-24 145.5 6.5 114 25-163 2-116 (153)
70 3hra_A Ankyrin repeat family p 99.8 1E-18 3.5E-23 148.0 9.5 131 23-157 3-149 (201)
71 2pnn_A Transient receptor pote 99.8 1.4E-19 4.8E-24 161.2 4.2 116 20-158 49-194 (273)
72 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.8E-19 6E-24 147.6 4.3 116 24-164 4-120 (162)
73 3jxi_A Vanilloid receptor-rela 99.8 7.7E-19 2.6E-23 155.1 8.2 113 22-157 43-185 (260)
74 1bd8_A P19INK4D CDK4/6 inhibit 99.8 3.3E-19 1.1E-23 145.2 4.9 115 25-163 2-117 (156)
75 1n11_A Ankyrin; clathrin, BAND 99.8 6.8E-19 2.3E-23 167.1 7.6 143 17-164 6-163 (437)
76 4g8k_A 2-5A-dependent ribonucl 99.8 8.5E-19 2.9E-23 160.9 7.8 134 21-155 21-209 (337)
77 1wdy_A 2-5A-dependent ribonucl 99.8 2.7E-18 9.4E-23 152.5 10.9 132 22-158 36-192 (285)
78 3ljn_A Hypothetical protein; a 99.8 3.8E-19 1.3E-23 164.9 5.5 143 15-164 10-190 (364)
79 3eu9_A Huntingtin-interacting 99.8 4.1E-18 1.4E-22 147.6 11.5 135 25-164 76-227 (240)
80 1wdy_A 2-5A-dependent ribonucl 99.7 4.9E-18 1.7E-22 150.8 10.8 145 18-163 65-235 (285)
81 2fo1_E LIN-12 protein; beta-ba 99.7 2.2E-18 7.5E-23 160.9 8.3 147 18-165 192-364 (373)
82 2fo1_E LIN-12 protein; beta-ba 99.7 2.3E-18 7.9E-23 160.7 7.7 145 17-163 158-329 (373)
83 2jab_A H10-2-G3; HER2, darpin, 99.7 3.7E-18 1.3E-22 136.1 6.9 93 17-114 39-131 (136)
84 2vge_A RELA-associated inhibit 99.7 7.6E-19 2.6E-23 153.1 3.1 141 17-162 46-203 (229)
85 4b93_B Ankyrin repeat domain-c 99.7 2.9E-18 9.8E-23 153.1 6.7 135 18-157 45-194 (269)
86 2zgd_A 3 repeat synthetic anky 99.7 2.4E-18 8.3E-23 132.3 4.5 93 16-113 15-107 (110)
87 2b0o_E UPLC1; arfgap, structur 99.7 3.1E-18 1E-22 155.5 5.9 107 21-157 186-295 (301)
88 2b0o_E UPLC1; arfgap, structur 99.7 4.1E-18 1.4E-22 154.7 6.6 118 25-166 151-278 (301)
89 1ikn_D Protein (I-kappa-B-alph 99.7 5.3E-18 1.8E-22 147.6 6.9 137 17-157 70-228 (236)
90 3deo_A Signal recognition part 99.7 3.3E-17 1.1E-21 137.4 10.5 89 17-110 68-157 (183)
91 1dcq_A PYK2-associated protein 99.7 7.6E-18 2.6E-22 151.1 6.9 93 18-115 162-257 (278)
92 3eu9_A Huntingtin-interacting 99.7 1.5E-17 5.2E-22 144.0 8.5 114 20-157 37-151 (240)
93 1d9s_A Cyclin-dependent kinase 99.7 4.6E-18 1.6E-22 135.5 4.7 92 17-114 37-129 (136)
94 1ycs_B 53BP2, P53BP2; ankyrin 99.7 1.9E-17 6.4E-22 144.9 8.9 93 18-115 63-158 (239)
95 1dcq_A PYK2-associated protein 99.7 1.4E-17 4.8E-22 149.4 7.8 117 26-165 131-256 (278)
96 3jue_A Arfgap with coiled-coil 99.7 8.2E-18 2.8E-22 156.7 6.4 118 24-165 198-319 (368)
97 3aaa_C Myotrophin, protein V-1 99.7 7.6E-18 2.6E-22 131.8 5.2 86 17-107 32-117 (123)
98 2rfm_A Putative ankyrin repeat 99.7 3.3E-17 1.1E-21 138.0 9.0 93 18-115 61-153 (192)
99 3lvq_E ARF-GAP with SH3 domain 99.7 1.8E-17 6.2E-22 160.6 7.3 115 26-164 133-257 (497)
100 3jue_A Arfgap with coiled-coil 99.7 3.2E-17 1.1E-21 152.7 7.6 119 18-157 226-346 (368)
101 3c5r_A BARD-1, BRCA1-associate 99.7 1.7E-17 5.9E-22 132.2 5.0 94 17-115 35-128 (137)
102 1n0r_A 4ANK, 4 ankyrin repeats 99.7 5.5E-17 1.9E-21 126.4 7.1 92 18-114 28-119 (126)
103 4g8k_A 2-5A-dependent ribonucl 99.7 7.4E-17 2.5E-21 147.9 8.3 121 19-164 162-290 (337)
104 3ehr_A Osteoclast-stimulating 99.7 2.7E-17 9.2E-22 141.9 4.5 94 17-115 98-192 (222)
105 3lvq_E ARF-GAP with SH3 domain 99.7 6.4E-17 2.2E-21 156.7 6.7 90 21-115 167-259 (497)
106 3ui2_A Signal recognition part 99.7 4.4E-16 1.5E-20 136.7 11.1 110 17-135 69-179 (244)
107 3t8k_A Uncharacterized protein 99.7 7.9E-17 2.7E-21 135.9 5.8 112 25-157 6-124 (186)
108 4hbd_A KN motif and ankyrin re 99.6 1.3E-16 4.5E-21 142.7 7.1 91 19-114 177-268 (276)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.6 3.4E-16 1.2E-20 116.2 4.4 84 58-164 1-85 (93)
110 1sw6_A Regulatory protein SWI6 99.6 6.9E-16 2.3E-20 141.4 6.1 77 27-108 99-176 (327)
111 2aja_A Ankyrin repeat family p 99.6 4.6E-17 1.6E-21 152.0 -2.5 125 20-165 87-217 (376)
112 2zgd_A 3 repeat synthetic anky 99.5 5E-15 1.7E-19 113.6 2.9 91 50-163 15-106 (110)
113 2aja_A Ankyrin repeat family p 99.5 9.1E-16 3.1E-20 143.3 -2.2 90 23-115 126-218 (376)
114 2l6b_A NR1C; ankyrin, consensu 99.4 1.1E-13 3.8E-18 106.4 6.6 78 18-100 35-112 (115)
115 1gp8_A Protein (scaffolding pr 41.7 19 0.00066 20.9 2.3 19 28-46 16-34 (40)
116 4ev6_A Magnesium transport pro 31.2 51 0.0018 29.2 4.7 21 262-282 281-301 (339)
117 2iub_A CORA, divalent cation t 27.3 38 0.0013 30.4 3.2 21 262-282 305-325 (363)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.90 E-value=6.3e-24 Score=176.84 Aligned_cols=135 Identities=23% Similarity=0.343 Sum_probs=114.3
Q ss_pred ccCCceeEEEe------cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHH
Q 046030 6 TNGGKTYQVRV------SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIY 79 (331)
Q Consensus 6 ~~~g~~~~~~~------~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll 79 (331)
.+.|+.+.++. +++.+|.+|+||||+|+..|+.++++.|++.+.+ ++.+|.+|+||||+|+.+|+.+++++|+
T Consensus 12 a~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpLh~A~~~g~~~~v~~Ll 90 (169)
T 4gpm_A 12 AENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLI 90 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHHHHHHHcCCHHHHHHHH
Confidence 34555555543 3567889999999999999999999999999999 8899999999999999999999999999
Q ss_pred hhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-h
Q 046030 80 EIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-E 158 (331)
Q Consensus 80 ~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~ 158 (331)
+.|++. |.+|.+|+||||+|+..|+.+++++| +..|++++.+|++|+||+++|.+ +
T Consensus 91 ~~gadv----n~~d~~G~TpLh~A~~~g~~~~v~~L-------------------l~~gad~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 91 SKGADV----NAKDSDGRTPLHHAAENGHKEVVKLL-------------------ISKGADVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp HTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HCcCCC----CCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCccccCCCCCCHHHHHHHcC
Confidence 999884 55999999999999999996654433 23689999999999999999965 4
Q ss_pred hhhHHH
Q 046030 159 HKTLLE 164 (331)
Q Consensus 159 ~~~l~~ 164 (331)
+.++++
T Consensus 148 ~~~iv~ 153 (169)
T 4gpm_A 148 NEEVVK 153 (169)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 555544
No 2
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=2e-22 Score=166.01 Aligned_cols=123 Identities=21% Similarity=0.166 Sum_probs=107.0
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++..+..|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~ 109 (165)
T 3twr_A 35 CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV----NVADLWKF 109 (165)
T ss_dssp CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTCC
T ss_pred ccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC----CCcCCCCC
Confidence 445677789999999999999999999999998 8899999999999999999999999999999885 45899999
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHhhhhHHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAEHKTLLE 164 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~~~~l~~ 164 (331)
||||+|+..|+.+++++| +..+++++.+|.+|+||+|+|.+++.++++
T Consensus 110 t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~t~l~~a~~~~~~i~~ 157 (165)
T 3twr_A 110 TPLHEAAAKGKYEICKLL-------------------LQHGADPTKKNRDGNTPLDLVKDGDTDIQD 157 (165)
T ss_dssp CHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCTGGGSCTTCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHH-------------------HHcCCCCcccCCCCCChhHhHhcCChHHHH
Confidence 999999999986654333 235889999999999999999887776654
No 3
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=1.8e-22 Score=161.28 Aligned_cols=114 Identities=14% Similarity=0.096 Sum_probs=101.8
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcH
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNL 99 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 99 (331)
.+|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~ 79 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV----NTTGYQNDSP 79 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCGGGCCH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc----cCcCCCCCCH
Confidence 4678899999999999999999999999988 7899999999999999999999999999999884 5599999999
Q ss_pred HHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 100 LHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 100 LHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
||+|+..|+.+++++| +..+++++.+|.+|+||+|+|.+
T Consensus 80 L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLL-------------------LSYGASRNAVNIFGLRPVDYTDD 118 (137)
T ss_dssp HHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCGGGGCCC
T ss_pred HHHHHHcCCHHHHHHH-------------------HHcCCCCCCCCCCCCCHHHHHhh
Confidence 9999999996654332 23588999999999999999954
No 4
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.87 E-value=9.8e-23 Score=162.89 Aligned_cols=123 Identities=15% Similarity=0.152 Sum_probs=107.0
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC-
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS- 95 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~- 95 (331)
.++..|.+|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+. |+.+++++|++.|++. |.+|.+
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~----~~~~~~~ 77 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP----NCADPAT 77 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS----SCCBTTT
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC----CCcCCCC
Confidence 5678889999999999999999999999999988 88999999999999999 9999999999999885 559999
Q ss_pred CCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh-hhhHHH
Q 046030 96 GNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE-HKTLLE 164 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~-~~~l~~ 164 (331)
|+||||+|+..|+.+++++| +..+++++.+|.+|+||+|+|.+. +.++++
T Consensus 78 g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~ 128 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVL-------------------HRAGARLDVCDAWGRLPVDLAEEQGHRDIAR 128 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHH-------------------HHTCCCCCCCSSSSSCHHHHHHHHTCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHH-------------------HHcCCCCCccCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999996654332 236889999999999999999653 444443
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=1.5e-22 Score=158.87 Aligned_cols=111 Identities=18% Similarity=0.130 Sum_probs=97.5
Q ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHH
Q 046030 22 DAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLH 101 (331)
Q Consensus 22 d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH 101 (331)
+..|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+||||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~d~~g~tpL~ 78 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI----NAPDKHHITPLL 78 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT----TCCCTTSCCHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC----CcCCCCCCCHHH
Confidence 45678999999999999999999999998 7899999999999999999999999999999884 559999999999
Q ss_pred HHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchH
Q 046030 102 LAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFT 156 (331)
Q Consensus 102 lAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~ 156 (331)
+|+..|+.+++++| +..+++++.+|.+|+||+|+|.
T Consensus 79 ~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 79 SAVYEGHVSCVKLL-------------------LSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHCC
T ss_pred HHHHcCCHHHHHHH-------------------HHcCCCCCCcCCCCCCHHHHhC
Confidence 99999996654433 2358889999999999999994
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.86 E-value=6.4e-22 Score=176.87 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=121.4
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
+++.+|.+|+||||+|+..|+.++++.|++.+++ ++..+..|+||+|+|+..++.+++++|++.|++. |.+|.+|
T Consensus 78 dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~----n~~d~~g 152 (269)
T 4b93_B 78 GVNVTSQDGSSPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP----NKKDLSG 152 (269)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS----CCCCTTC
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCCCCC----CCCCCCC
Confidence 3667889999999999999999999999999998 7889999999999999999999999999999885 5599999
Q ss_pred CcHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHHh
Q 046030 97 NNLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
+||||+|+..|+.+++++| ...+++.+...+..+.++.++ .|++++.+|++|+||+|+|.+.
T Consensus 153 ~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 153 NTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp CCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTT
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhC
Confidence 9999999999999887655 135677888888888888887 5899999999999999999653
No 7
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.86 E-value=1.1e-21 Score=164.02 Aligned_cols=117 Identities=17% Similarity=0.264 Sum_probs=101.7
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++..|..|.||||+|+..|+.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~d~~g~ 106 (179)
T 3f6q_A 32 LNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI----NAVNEHGN 106 (179)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSC
T ss_pred ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CccCCCCC
Confidence 566788899999999999999999999999988 7889999999999999999999999999999884 55899999
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
||||+|+..|+.+++++| +..+++++.+|.+|+||+++|.+.
T Consensus 107 t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 107 VPLHYACFWGQDQVAEDL-------------------VANGALVSICNKYGEMPVDKAKAP 148 (179)
T ss_dssp CHHHHHHHTTCHHHHHHH-------------------HHTTCCSSBCCTTSCCGGGGSCHH
T ss_pred CHHHHHHHcCCHHHHHHH-------------------HHCCCCcchhccCCCCcHHHHHHH
Confidence 999999999986654332 236889999999999999999653
No 8
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.86 E-value=9.8e-22 Score=163.00 Aligned_cols=127 Identities=18% Similarity=0.195 Sum_probs=106.1
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++..|..|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|.+. |.+|.+|+
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~ 103 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-PHILAKERESALSLASTGGYTDIVGLLLERDVDI----NIYDWNGG 103 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT----TCCCTTSC
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCC----CCCCCCCC
Confidence 566788899999999999999999999999988 7888999999999999999999999999998874 55899999
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHHHHHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLEEAEN 168 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~~~~~ 168 (331)
||||+|+..|+.+++++| +..+++++.+|.+|+||+|+|.. ++.++++...+
T Consensus 104 t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (172)
T 3v30_A 104 TPLLYAVRGNHVKCVEAL-------------------LARGADLTTEADSGYTPMDLAVALGYRKVQQVIEN 156 (172)
T ss_dssp CHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHH-------------------HHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHH
Confidence 999999999986654332 22588999999999999999965 45555554433
No 9
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.86 E-value=6.9e-22 Score=166.98 Aligned_cols=144 Identities=12% Similarity=0.048 Sum_probs=114.6
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++.+|.+|.||||+|+..|+.++++.|++.+++ ++..|..|+||||+|+..|+.+++++|++.|++. +.+|.+|
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g 101 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK-LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV----NTKDFSG 101 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT----TCCCTTS
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc-cccccccCccHHHHHHHcCCHHHHHHHHHCCCCC----CCCCCCC
Confidence 3567888899999999999999999999998887 7888889999999999999999999999988874 4588999
Q ss_pred CcHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH-hhhh
Q 046030 97 NNLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA-EHKT 161 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~-~~~~ 161 (331)
+||||+|+..|+.+++++| ...+++.+...+..+.++.++ .+++++.+|.+|.||+++|.. ++.+
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 181 (192)
T 2rfm_A 102 KTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQE 181 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHH
Confidence 9999999999988776544 124566666666667777666 478888888888888888854 3445
Q ss_pred HHHH
Q 046030 162 LLEE 165 (331)
Q Consensus 162 l~~~ 165 (331)
+++.
T Consensus 182 ~v~~ 185 (192)
T 2rfm_A 182 VIKI 185 (192)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 10
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.86 E-value=1.1e-21 Score=162.00 Aligned_cols=128 Identities=16% Similarity=0.216 Sum_probs=92.7
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++..|.+|.||||+|+..|+.++++.|++.+++ ++..|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~ 103 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV----NEYDWNGG 103 (167)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT----TCCCTTSC
T ss_pred cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC----CcCCCCCC
Confidence 455667777777777777777777777777766 6667777777777777777777777777777664 34777777
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH-hhhhHHHHHHHHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA-EHKTLLEEAENWM 170 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~-~~~~l~~~~~~~~ 170 (331)
||||+|+..|+.++ ++.++ .+++++.+|.+|+||+++|.+ ++.++++...+..
T Consensus 104 t~L~~A~~~~~~~~--------------------v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 104 TPLLYAVHGNHVKC--------------------VKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp CHHHHHHHTTCHHH--------------------HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHH--------------------HHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 77777777776554 44444 588899999999999999954 4566655544443
No 11
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=1e-21 Score=159.93 Aligned_cols=119 Identities=18% Similarity=0.186 Sum_probs=102.8
Q ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHH
Q 046030 21 GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLL 100 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 100 (331)
.|..|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+|||
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L 104 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASEGHANIVEVLLKHGADV----NAKDMLKMTAL 104 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT----TCCCTTSCCHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCC----CCCCCCCCCHH
Confidence 467899999999999999999999999988 7889999999999999999999999999999885 55999999999
Q ss_pred HHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHH
Q 046030 101 HLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLL 163 (331)
Q Consensus 101 HlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~ 163 (331)
|+|+..|+.+++++| +..|++++.+|.+|+||+++|.+ ++.+++
T Consensus 105 ~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~t~l~~A~~~~~~~i~ 149 (153)
T 1awc_B 105 HWATEHNHQEVVELL-------------------IKYGADVHTQSKFCKTAFDISIDNGNEDLA 149 (153)
T ss_dssp HHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHH-------------------HHcCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 999999986654332 22588999999999999999965 444544
No 12
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.85 E-value=1.9e-21 Score=161.07 Aligned_cols=123 Identities=20% Similarity=0.318 Sum_probs=97.9
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++.+|.+|.||||+|+..|+.++++.|++.+++ ++..|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~ 114 (169)
T 2y1l_E 40 VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADV----NANDMEGH 114 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSC
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CCCCCCCC
Confidence 456677888888888888888888888888887 7788888888888888888888888888888774 44888888
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~ 164 (331)
||||+|+..|+.+++++| +..+++++.+|.+|+||+++|.+ ++.++++
T Consensus 115 t~L~~A~~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 163 (169)
T 2y1l_E 115 TPLHLAAMFGHLEIVEVL-------------------LKNGADVNAQDKFGKTAFDISIDNGNEDLAE 163 (169)
T ss_dssp CHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCcCCCCCCHHHHHHHhCCHHHHH
Confidence 888888888886544332 22588899999999999999965 3445443
No 13
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.85 E-value=6.5e-22 Score=158.07 Aligned_cols=120 Identities=22% Similarity=0.247 Sum_probs=102.2
Q ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHH
Q 046030 21 GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLL 100 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 100 (331)
....+.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.|++. |.+|.+|+|||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~d~~g~t~L 84 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV----NAVDAIGFTPL 84 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTCCCHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CcCCCCCCCHH
Confidence 345678999999999999999999999998 7899999999999999999999999999999884 55999999999
Q ss_pred HHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh-hhhHHH
Q 046030 101 HLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE-HKTLLE 164 (331)
Q Consensus 101 HlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~-~~~l~~ 164 (331)
|+|+..|+.+++++| +..+++++.+|.+|+||+|+|.+. +.++++
T Consensus 85 ~~A~~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~ 130 (136)
T 2jab_A 85 HLAAFIGHLEIAEVL-------------------LKHGADVNAQDKFGKTAFDISIGNGNEDLAE 130 (136)
T ss_dssp HHHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHcCCHHHHHHH-------------------HHcCCCCcCcCCCCCCHHHHHHHCCCHHHHH
Confidence 999999986654332 225888999999999999999653 444443
No 14
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.84 E-value=8.6e-21 Score=154.59 Aligned_cols=122 Identities=19% Similarity=0.152 Sum_probs=104.8
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++..|..|.||||+ +..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|
T Consensus 28 ~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g 101 (156)
T 1bd8_A 28 HPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV----NVPDGTG 101 (156)
T ss_dssp CTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS----CCCCTTS
T ss_pred CccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC----CCcCCCC
Confidence 456678889999999 999999999999999998 8899999999999999999999999999999874 5599999
Q ss_pred CcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHH
Q 046030 97 NNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~ 164 (331)
+||||+|+..|+.+++ +.++...+++.+|.+|.||+++|.+ ++.++++
T Consensus 102 ~t~L~~A~~~~~~~~v--------------------~~Ll~~~~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 102 ALPIHLAVQEGHTAVV--------------------SFLAAESDLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp CCHHHHHHHHTCHHHH--------------------HHHHTTSCTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred CcHHHHHHHhChHHHH--------------------HHHHhccCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999999986654 3344337889999999999999965 3455544
No 15
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=7.2e-21 Score=148.76 Aligned_cols=117 Identities=25% Similarity=0.378 Sum_probs=101.2
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHH
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLA 103 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlA 103 (331)
+|+||||.|+..|+.++++.|++.+++ ++..|..|+||||+|+..++.+++++|++.|.+. +.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV----NAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC----cccCCCCCcHHHHH
Confidence 589999999999999999999999998 7889999999999999999999999999999885 45899999999999
Q ss_pred HhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHH
Q 046030 104 AQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 104 a~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~ 164 (331)
+..|+.+++++| +..+.+++.+|.+|+||+++|.+ ++.++++
T Consensus 76 ~~~~~~~~~~~L-------------------l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 118 (126)
T 1n0r_A 76 ARNGHLEVVKLL-------------------LEAGADVNAKDKNGRTPLHLAARNGHLEVVK 118 (126)
T ss_dssp HHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHcChHHHHHHH-------------------HHcCCCCcccCCCCCCHHHHHHHcCcHHHHH
Confidence 999986654332 22578899999999999999965 3445444
No 16
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.83 E-value=4.5e-21 Score=157.15 Aligned_cols=122 Identities=17% Similarity=0.174 Sum_probs=102.6
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++..|..|.||||+|+. |+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|.+. |.+|.+|
T Consensus 30 ~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g 103 (162)
T 1ihb_A 30 NVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV----NIEDNEG 103 (162)
T ss_dssp CTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTS
T ss_pred CccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CCcCCCC
Confidence 356678889999999999 999999999999988 7889999999999999999999999999999874 5599999
Q ss_pred CcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-Cccc-ccccccCCCCchhchHHh-hhhHHH
Q 046030 97 NNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV-KPSF-KEMKNNDGKTPWELFTAE-HKTLLE 164 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~-~~~~n~~G~Tpl~la~~~-~~~l~~ 164 (331)
+||||+|+..|+.++++ .++ .+.+ ++.+|.+|+||+|+|.+. +.++++
T Consensus 104 ~t~L~~A~~~~~~~~v~--------------------~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 104 NLPLHLAAKEGHLRVVE--------------------FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp CCHHHHHHHTTCHHHHH--------------------HHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHcCCHHHHH--------------------HHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 99999999999866543 333 3555 589999999999999653 445443
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.83 E-value=9.3e-21 Score=167.20 Aligned_cols=152 Identities=16% Similarity=0.121 Sum_probs=116.0
Q ss_pred CCceeEEEeccc-------CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHh
Q 046030 8 GGKTYQVRVSIP-------DGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYE 80 (331)
Q Consensus 8 ~g~~~~~~~~l~-------~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~ 80 (331)
.++.+.++..+. ..|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++
T Consensus 33 ~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 111 (253)
T 1yyh_A 33 EDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIR 111 (253)
T ss_dssp -------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 346666665543 3578899999999999999999999999988 78899999999999999999999999999
Q ss_pred hCC-chhhhhhhcccCCCcHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-Ccccccccc
Q 046030 81 IGF-SKELIATYVDKSGNNLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKN 145 (331)
Q Consensus 81 ~~~-~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n 145 (331)
.+. + ++.+|.+|.||||+|+..|+.++++.| ...+++.+...+..+.++.++ .|++++.+|
T Consensus 112 ~~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 187 (253)
T 1yyh_A 112 NRATD----LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQN 187 (253)
T ss_dssp STTSC----TTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred cCCCC----ccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 886 4 355889999999999999998877654 135677777777777777776 478888888
Q ss_pred cCCCCchhchHH-hhhhHHH
Q 046030 146 NDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 146 ~~G~Tpl~la~~-~~~~l~~ 164 (331)
.+|+||+|+|.. ++.++++
T Consensus 188 ~~g~tpL~~A~~~~~~~~v~ 207 (253)
T 1yyh_A 188 NREETPLFLAAREGSYETAK 207 (253)
T ss_dssp TTSCCHHHHHHHHTCHHHHH
T ss_pred CCCCCHHHHHHHCCCHHHHH
Confidence 999999998854 4445544
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.83 E-value=2.7e-20 Score=164.25 Aligned_cols=147 Identities=11% Similarity=0.121 Sum_probs=126.1
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++..|.+|.||||+|+..|+.++++.|++.++..++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~d~~g 157 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV----NAVDDLG 157 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCT----TCBCTTS
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC----CCcCCCC
Confidence 356678889999999999999999999999988558899999999999999999999999999999884 5599999
Q ss_pred CcHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH-hhhh
Q 046030 97 NNLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA-EHKT 161 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~-~~~~ 161 (331)
+||||+|+..|+.+++++| ...+++.+...+..+.++.++ .|++++.+|.+|+||+|+|.+ ++.+
T Consensus 158 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~ 237 (253)
T 1yyh_A 158 KSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHD 237 (253)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHH
Confidence 9999999999998877654 235677777777788888887 589999999999999999954 5667
Q ss_pred HHHHHH
Q 046030 162 LLEEAE 167 (331)
Q Consensus 162 l~~~~~ 167 (331)
+++...
T Consensus 238 i~~~l~ 243 (253)
T 1yyh_A 238 IVRLLD 243 (253)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665443
No 19
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.83 E-value=2.2e-21 Score=164.00 Aligned_cols=130 Identities=18% Similarity=0.124 Sum_probs=105.6
Q ss_pred CCCCCHHHHHHhcCcH----HHHHHHHHhCCCcccccccCCccHHHHHHHcCC------HHHHHHHHhhCCchhhhhhhc
Q 046030 23 AANSPQPLQNAHSGNF----KFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRH------AETFKLIYEIGFSKELIATYV 92 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~----~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~------~~iv~~Ll~~~~~~~~~in~~ 92 (331)
..|+||||+|+.+|+. ++++.|++++++ ++.+|..|+||||+|+..++ .+++++|++.|++. |.+
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi----n~~ 110 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGAD-IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI----TAL 110 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS----SSC
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC----Ccc
Confidence 5699999999999975 589999999999 89999999999999999987 57899999999984 559
Q ss_pred ccCCC-cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc--CcccccccccCCCCchhchHH-hhhhHHHHHHH
Q 046030 93 DKSGN-NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV--KPSFKEMKNNDGKTPWELFTA-EHKTLLEEAEN 168 (331)
Q Consensus 93 d~~G~-TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~--~~~~~~~~n~~G~Tpl~la~~-~~~~l~~~~~~ 168 (331)
|.+|+ ||||+|+..+..+ ....+.++.++ +|++++.+|++|+||+|+|.+ ++.+.++..++
T Consensus 111 d~~g~ttpLh~A~~~~~~~---------------~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 111 YKPYKIVVFKNIFNYFVDE---------------NEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp BGGGTBCTTGGGGGCCSCH---------------HHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred CCCcCchHHHHHHHcCCCh---------------hhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999 9999999965432 01122344444 589999999999999999965 45666666666
Q ss_pred HHHh
Q 046030 169 WMKR 172 (331)
Q Consensus 169 ~~k~ 172 (331)
+.++
T Consensus 176 ~~~~ 179 (186)
T 3t8k_A 176 YIKK 179 (186)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 20
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.83 E-value=1.7e-20 Score=162.55 Aligned_cols=135 Identities=19% Similarity=0.213 Sum_probs=85.7
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++..|.+|.||||+|+..|+.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|.+. +.+|.+|.
T Consensus 33 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~ 107 (231)
T 3aji_A 33 ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV----NAVNQNGC 107 (231)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTSC
T ss_pred hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC----CCCCCCCC
Confidence 345566677777777777777777777777666 5666777777777777777777777777776663 33666677
Q ss_pred cHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH
Q 046030 98 NLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 157 (331)
||||+|+..|+.+++++| ...+++.+...+..+.++.++ .+.+++.+|.+|+||+|+|.+
T Consensus 108 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 181 (231)
T 3aji_A 108 TPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACD 181 (231)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHH
Confidence 777777776666554433 123455555555555555554 355666666666666666643
No 21
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.83 E-value=1.8e-20 Score=158.97 Aligned_cols=142 Identities=15% Similarity=0.133 Sum_probs=107.3
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhC-CchhhhhhhcccC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIG-FSKELIATYVDKS 95 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~-~~~~~~in~~d~~ 95 (331)
.++..|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.+ .+ ++.+|.+
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~----~~~~~~~ 105 (201)
T 3hra_A 31 QVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSISDSPYLYAGAQGRTEILAYMLKHATPD----LNKHNRY 105 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC----TTCCCTT
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcc----cccccCC
Confidence 3566778899999999999999999999999888 7888999999999999999999999999544 34 3558899
Q ss_pred CCcHHHHHHhhCCCCCCCCCC--------------CcHHhhHHhhhh-----hhhhhhhc-CcccccccccCCCCchhch
Q 046030 96 GNNLLHLAAQYSNPKPISKVP--------------GAALEMQRELIT-----FKEVETIV-KPSFKEMKNNDGKTPWELF 155 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~l~--------------~~~l~~~~~l~~-----~~~v~~l~-~~~~~~~~n~~G~Tpl~la 155 (331)
|+||||+|+..|+.++++.|. ..+++....... .+.++.++ .|++++.+|.+|+||+|+|
T Consensus 106 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 185 (201)
T 3hra_A 106 GGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYA 185 (201)
T ss_dssp SCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHH
Confidence 999999999999877665431 134554443332 45566555 4777777888888888887
Q ss_pred HH-hhhhHH
Q 046030 156 TA-EHKTLL 163 (331)
Q Consensus 156 ~~-~~~~l~ 163 (331)
.+ ++.+++
T Consensus 186 ~~~~~~~~~ 194 (201)
T 3hra_A 186 NQKGYTEIS 194 (201)
T ss_dssp HHHTCHHHH
T ss_pred HHcCCHhHH
Confidence 54 344443
No 22
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.82 E-value=2.6e-20 Score=160.50 Aligned_cols=146 Identities=18% Similarity=0.160 Sum_probs=113.3
Q ss_pred CCceeEEEeccc------C-CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHh
Q 046030 8 GGKTYQVRVSIP------D-GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYE 80 (331)
Q Consensus 8 ~g~~~~~~~~l~------~-~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~ 80 (331)
+|+.+.++..++ . .|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 355566655543 2 377899999999999999999999999988 78899999999999999999999999999
Q ss_pred hCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-Cccccccccc
Q 046030 81 IGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNN 146 (331)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~ 146 (331)
.+... ++.+|.+|.||||+|+..|+.++++.| ...+++.+...+..+.++.++ .+.+++.+|.
T Consensus 80 ~~~~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 156 (223)
T 2f8y_A 80 NRATD---LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 156 (223)
T ss_dssp BTTSC---TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCCCC---cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 87621 355899999999999999998766544 124566666666666666666 4777788888
Q ss_pred CCCCchhchHH
Q 046030 147 DGKTPWELFTA 157 (331)
Q Consensus 147 ~G~Tpl~la~~ 157 (331)
+|.||+|+|.+
T Consensus 157 ~g~t~L~~A~~ 167 (223)
T 2f8y_A 157 REETPLFLAAR 167 (223)
T ss_dssp TCCCHHHHHHH
T ss_pred CCcCHHHHHHH
Confidence 88888888754
No 23
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.82 E-value=1.5e-20 Score=167.43 Aligned_cols=94 Identities=15% Similarity=0.175 Sum_probs=81.4
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCC--cccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPD--LVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~--~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
++..|.+|.||||+|+..|+.++++.|++.+++ .++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~----~~~~~~ 77 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV----LVAERG 77 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS----SCCCTT
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CCCCCC
Confidence 466788999999999999999999999988776 36788899999999999999999999999999885 448999
Q ss_pred CCcHHHHHHhhCCCCCCCCC
Q 046030 96 GNNLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~l 115 (331)
|+||||+|+..|+.+++++|
T Consensus 78 g~tpL~~A~~~~~~~~v~~L 97 (282)
T 1oy3_D 78 GHTALHLACRVRAHTCACVL 97 (282)
T ss_dssp SCCHHHHHTTTTCHHHHHHH
T ss_pred CCCHHHHHHHcCCcchhHhh
Confidence 99999999999988766544
No 24
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.82 E-value=3.1e-20 Score=161.51 Aligned_cols=134 Identities=20% Similarity=0.182 Sum_probs=80.7
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcH
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNL 99 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 99 (331)
.+|.+|.||||+|+..|+.++++.|++.++..++..|..|+||||+|+..|+.+++++|++.|.+. +.+|.+|+||
T Consensus 72 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~ 147 (237)
T 3b7b_A 72 PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDI----NIRDNEENIC 147 (237)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCH
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC----CccCCCCCCH
Confidence 345556666666666666666666666654335555666666666666666666666666666553 3366666666
Q ss_pred HHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH
Q 046030 100 LHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 100 LHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 157 (331)
||+|+..|+.+++++| ...+++.+...+..+.++.++ .|++++.+|++|+||+|+|..
T Consensus 148 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 219 (237)
T 3b7b_A 148 LHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASL 219 (237)
T ss_dssp HHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCT
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 6666666665554433 123455555555555566555 466777777777777777743
No 25
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.82 E-value=1.1e-20 Score=157.10 Aligned_cols=113 Identities=27% Similarity=0.364 Sum_probs=99.0
Q ss_pred CHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhh
Q 046030 27 PQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQY 106 (331)
Q Consensus 27 t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~ 106 (331)
++|+.||+.|+.++|+.|++.+++ ++.+|.+|+||||+|+..++.+++++|++.|++. |.+|.+|+||||+|+..
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad-vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~----~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD-VNASDSDGRTPLHHAAENGHKEVVKLLISKGADV----NAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch----hhhccCCCCHHHHHHHc
Confidence 479999999999999999999999 8999999999999999999999999999999885 55999999999999999
Q ss_pred CCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh-hhhHH
Q 046030 107 SNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE-HKTLL 163 (331)
Q Consensus 107 g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~-~~~l~ 163 (331)
|+.+++++| +..|++++.+|.+|+||||+|.+. +.+++
T Consensus 81 g~~~~v~~L-------------------l~~gadvn~~d~~G~TpLh~A~~~g~~~~v 119 (169)
T 4gpm_A 81 GHKEVVKLL-------------------ISKGADVNAKDSDGRTPLHHAAENGHKEVV 119 (169)
T ss_dssp TCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCHHHHHHH-------------------HHCcCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 996654433 236889999999999999999653 44433
No 26
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.82 E-value=2.6e-20 Score=167.54 Aligned_cols=143 Identities=14% Similarity=0.068 Sum_probs=122.4
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++.+|.+|.||||+|+..|+.++++.|++.+++ ++.+|.+|+||||+|+..|+.+++++|++.|++. |.+|.+|
T Consensus 51 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~----~~~~~~g 125 (285)
T 3d9h_A 51 PLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV----NGVTADW 125 (285)
T ss_dssp TTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS----SCCCTTC
T ss_pred cccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC----CCCCCCC
Confidence 3667889999999999999999999999999988 8899999999999999999999999999999884 5599999
Q ss_pred CcHHHHHHhhCCCCCCCCC------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH-hhhhH
Q 046030 97 NNLLHLAAQYSNPKPISKV------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA-EHKTL 162 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~-~~~~l 162 (331)
+||||+|+..|+.+++++| ...+++.+...+..+.++.++ .+.+++.+|.+|.||+++|.. ++.++
T Consensus 126 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~ 205 (285)
T 3d9h_A 126 HTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRAC 205 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 9999999999998877654 134567777777777788777 588899999999999999965 34444
Q ss_pred HH
Q 046030 163 LE 164 (331)
Q Consensus 163 ~~ 164 (331)
++
T Consensus 206 v~ 207 (285)
T 3d9h_A 206 VK 207 (285)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.82 E-value=9.7e-21 Score=168.65 Aligned_cols=119 Identities=14% Similarity=0.120 Sum_probs=92.7
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCccccccc-CCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDE-EDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~-~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
.++.+|..|.||||+|+..|+.++++.|++.+++ ++..|. .|+||||+|+..|+.+++++|++.|++. |.+|.+
T Consensus 150 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~----~~~d~~ 224 (282)
T 1oy3_D 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADP----TARMYG 224 (282)
T ss_dssp GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTT
T ss_pred cCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC----cccccC
Confidence 3677889999999999999999999999999999 667765 5999999999999999999999999985 559999
Q ss_pred CCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHhh
Q 046030 96 GNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAEH 159 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~~ 159 (331)
|+||||+|+..|+.+++++| +..|++++.+|.+|.||++.+....
T Consensus 225 g~tpL~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 225 GRTPLGSALLRPNPILARLL-------------------RAHGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp SCCHHHHHHTSSCHHHHHHH-------------------HHTTCCCCCCC--------------
T ss_pred CCCHHHHHHHcCCcHHHHHH-------------------HHcCCCcCcCCCcccccccccCCcc
Confidence 99999999999996654433 3369999999999999999996644
No 28
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.82 E-value=3.1e-20 Score=167.21 Aligned_cols=147 Identities=16% Similarity=0.149 Sum_probs=109.3
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhh--------
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELI-------- 88 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~-------- 88 (331)
+++..|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++.+..
T Consensus 65 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l 143 (299)
T 1s70_B 65 DINYANVDGLTALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPL 143 (299)
T ss_dssp CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence 3567788899999999999999999999999988 7888999999999999999999999999988764320
Q ss_pred ---------------h---------------------------------hhcccCCCcHHHHHHhhCCCCCCCCC-----
Q 046030 89 ---------------A---------------------------------TYVDKSGNNLLHLAAQYSNPKPISKV----- 115 (331)
Q Consensus 89 ---------------i---------------------------------n~~d~~G~TpLHlAa~~g~~~~~~~l----- 115 (331)
+ ...|..|.||||+|+..|+.+++++|
T Consensus 144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 223 (299)
T 1s70_B 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY 223 (299)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCC
Confidence 0 00234567777777777776665543
Q ss_pred --------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHHhhhhHHH
Q 046030 116 --------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTAEHKTLLE 164 (331)
Q Consensus 116 --------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~~~~l~~ 164 (331)
...+++.+...+..+.++.++ .|++++.+|.+|+||+|+|.++..+.++
T Consensus 224 d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~ 281 (299)
T 1s70_B 224 DVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLE 281 (299)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHH
T ss_pred CCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 124566666666666676666 4777788888888888888665444433
No 29
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.82 E-value=1.9e-20 Score=162.46 Aligned_cols=127 Identities=19% Similarity=0.198 Sum_probs=89.8
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcc----cccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhh-----
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLV----HELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELI----- 88 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~----~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~----- 88 (331)
++.+|.+|.||||+|+..|+.++++.|++.+++.. +..|..|+||||+|+..|+.+++++|++.|++.+..
T Consensus 30 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 109 (232)
T 2rfa_A 30 VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSV 109 (232)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcc
Confidence 45567778888888888888888888888777632 455667888888888888888888888877764430
Q ss_pred ----hhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHHh-hhhH
Q 046030 89 ----ATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTAE-HKTL 162 (331)
Q Consensus 89 ----in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~-~~~l 162 (331)
.+.+|.+|+||||+|+..|+.++ ++.++ .|++++.+|.+|+||+|+|... +.+.
T Consensus 110 ~~~~~~~~~~~g~t~L~~A~~~~~~~~--------------------v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~ 169 (232)
T 2rfa_A 110 FHYRPHNLIYYGEHPLSFAACVGSEEI--------------------VRLLIEHGADIRAQDSLGNTVLHILILQPNKTF 169 (232)
T ss_dssp GSCCTTCSCCCCSSHHHHHHHHTCHHH--------------------HHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHH
T ss_pred eeecccccccCCCCHHHHHHHcCCHHH--------------------HHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHH
Confidence 00113368888888888777554 33344 5889999999999999999653 4444
Q ss_pred HH
Q 046030 163 LE 164 (331)
Q Consensus 163 ~~ 164 (331)
++
T Consensus 170 ~~ 171 (232)
T 2rfa_A 170 AC 171 (232)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 30
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.82 E-value=3.1e-20 Score=160.92 Aligned_cols=135 Identities=19% Similarity=0.204 Sum_probs=84.1
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++.+|..|.||||+|+..|+.++++.|++++++ ++.+|..|+||||+|+..|+.+++++|++.|.+. +.+|..|+
T Consensus 66 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~ 140 (231)
T 3aji_A 66 VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP----DAKDHYDA 140 (231)
T ss_dssp SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSC
T ss_pred CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CCcCCCCC
Confidence 345556666677766666666666666666666 5666666666777666666666666666666653 33666666
Q ss_pred cHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH
Q 046030 98 NLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 157 (331)
||||+|+..|+.+++++| ...+++.+...+..+.++.++ .|++++.+|.+|+||+++|.+
T Consensus 141 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 214 (231)
T 3aji_A 141 TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKG 214 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHh
Confidence 677766666666554433 123455555555555555555 366666666666677666644
No 31
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.82 E-value=1.5e-20 Score=163.78 Aligned_cols=147 Identities=12% Similarity=0.071 Sum_probs=120.9
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchh--hhhhhccc
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKE--LIATYVDK 94 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~--~~in~~d~ 94 (331)
.++..|..|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.+.+.. ..++..|.
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY 115 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC
Confidence 3567788899999999999999999999999988 78899999999999999999999999999886531 12467889
Q ss_pred CCCcHHHHHHhhCCCCCCCCC--------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH-h
Q 046030 95 SGNNLLHLAAQYSNPKPISKV--------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA-E 158 (331)
Q Consensus 95 ~G~TpLHlAa~~g~~~~~~~l--------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~-~ 158 (331)
+|+||||+|+..|+.+++++| ...+++.+...+..+.++.++ .|++++.+|.+|.||+++|.. +
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRP 195 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccC
Confidence 999999999999998876544 135677777777778888777 488999999999999999964 3
Q ss_pred hhhHHH
Q 046030 159 HKTLLE 164 (331)
Q Consensus 159 ~~~l~~ 164 (331)
+.++++
T Consensus 196 ~~~~~~ 201 (236)
T 1ikn_D 196 STRIQQ 201 (236)
T ss_dssp CHHHHH
T ss_pred chHHHH
Confidence 444433
No 32
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.82 E-value=1.9e-20 Score=165.14 Aligned_cols=128 Identities=16% Similarity=0.178 Sum_probs=101.6
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccC-------------CccHHHHHHHcCCHHHHHHHHh---hCC
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEE-------------DRSIFHIAVMHRHAETFKLIYE---IGF 83 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~-------------G~t~LH~Aa~~g~~~iv~~Ll~---~~~ 83 (331)
.+|.+|.||||+|+..|+.++++.|++.+++ ++.+|.. |+||||+|+..|+.+++++|++ .|+
T Consensus 85 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga 163 (256)
T 2etb_A 85 DEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA 163 (256)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred cccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC
Confidence 3557799999999999999999999999998 7777776 9999999999999999999999 888
Q ss_pred chhhhhhhcccCCCcHHHHHHhh--CCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-Ccccc-------cccccCCCCchh
Q 046030 84 SKELIATYVDKSGNNLLHLAAQY--SNPKPISKVPGAALEMQRELITFKEVETIV-KPSFK-------EMKNNDGKTPWE 153 (331)
Q Consensus 84 ~~~~~in~~d~~G~TpLHlAa~~--g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~-------~~~n~~G~Tpl~ 153 (331)
+. |.+|.+|+||||+|+.. ++.+..+. ..+.++.++ .|+++ +.+|.+|+||+|
T Consensus 164 ~~----n~~d~~g~TpLh~A~~~~~~~~~~~~~-------------~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 164 SL----EATDSLGNTVLHALVMIADNSPENSAL-------------VIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp CT----TCCCTTSCCHHHHHHHHCCSCHHHHHH-------------HHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHH
T ss_pred Cc----CccCCCCCCHHHHHHHcccCCchhhHH-------------HHHHHHHHHHcCCCcccccccccccCCCCCCHHH
Confidence 74 55999999999999994 44320000 011244444 47777 899999999999
Q ss_pred chHH-hhhhHHHH
Q 046030 154 LFTA-EHKTLLEE 165 (331)
Q Consensus 154 la~~-~~~~l~~~ 165 (331)
+|.+ ++.++++.
T Consensus 227 ~A~~~g~~~~v~~ 239 (256)
T 2etb_A 227 LAAKEGKIEIFRH 239 (256)
T ss_dssp HHHHTTCHHHHHH
T ss_pred HHHHhCCHHHHHH
Confidence 9965 45555543
No 33
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.82 E-value=4.4e-20 Score=159.09 Aligned_cols=143 Identities=11% Similarity=0.126 Sum_probs=120.8
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++..|.+|.||||+|+..|+.++++.|++.++..++..|..|+||||+|+..|+.+++++|++.|.+. |.+|.+|+
T Consensus 51 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~ 126 (223)
T 2f8y_A 51 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV----NAVDDLGK 126 (223)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT----TCBCTTSC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC----cCcCCCCC
Confidence 45677889999999999999999999999988558889999999999999999999999999998874 55899999
Q ss_pred cHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH-hhhhH
Q 046030 98 NLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA-EHKTL 162 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~-~~~~l 162 (331)
||||+|+..|+.+++++| ...+++.+...+..+.++.++ .+++++.+|.+|.||+++|.+ ++.++
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i 206 (223)
T 2f8y_A 127 SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDI 206 (223)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHH
Confidence 999999999998876654 135677777777778888777 588999999999999999965 44555
Q ss_pred HH
Q 046030 163 LE 164 (331)
Q Consensus 163 ~~ 164 (331)
++
T Consensus 207 ~~ 208 (223)
T 2f8y_A 207 VR 208 (223)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 34
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.82 E-value=3.1e-21 Score=157.75 Aligned_cols=122 Identities=12% Similarity=0.106 Sum_probs=100.9
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
.+..++.|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+ .|+.+++++|++.|++. |.+|.+|+
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~----~~~d~~g~ 78 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP----NCADPATL 78 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC----CCCCTTTC
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC----CCcCCCCC
Confidence 345677899999999999999999999999988 8899999999999985 99999999999999884 55999999
Q ss_pred c-HHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHH
Q 046030 98 N-LLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 98 T-pLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~ 164 (331)
| |||+|+..|+.+++++| +..+++++.+|.+|+||+|+|.. ++.++++
T Consensus 79 ttpL~~A~~~~~~~~v~~L-------------------l~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~ 128 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVL-------------------HRAGARLDVRDAWGRLPVDLAEELGHRDVAR 128 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHH-------------------HHHTCCSSCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred cHHHHHHHHCCCHHHHHHH-------------------HHcCCCCcccCCCCCCHHHHHHHhCHHHHHH
Confidence 9 99999999996654332 22588899999999999999965 4455443
No 35
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=1.9e-21 Score=168.14 Aligned_cols=121 Identities=17% Similarity=0.260 Sum_probs=103.5
Q ss_pred cCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhh-CCchhhhhhhcccCCC
Q 046030 19 PDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEI-GFSKELIATYVDKSGN 97 (331)
Q Consensus 19 ~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~-~~~~~~~in~~d~~G~ 97 (331)
+..|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++. |++. |.+|.+|+
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~----~~~d~~g~ 141 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL----NQQNKLGD 141 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC----CCCCTTSC
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc----cccCCCCC
Confidence 34556789999999999999999999999988 889999999999999999999999999998 7774 55999999
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLL 163 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~ 163 (331)
||||+|+..|+.+++++| +..|++++.+|.+|+||+++|.+ ++.+++
T Consensus 142 tpL~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~t~l~~A~~~~~~~~l 189 (222)
T 3ehr_A 142 TALHAAAWKGYADIVQLL-------------------LAKGARTDLRNIEKKLAFDMATNAACASLL 189 (222)
T ss_dssp CHHHHHHHHTCHHHHHHH-------------------HHHTCCSCCCCTTSCCHHHHCCSHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHH-------------------HHcCCCCccccCCCCCHHHHhcchhHHHHH
Confidence 999999999996654433 22588999999999999999954 334443
No 36
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.81 E-value=1.8e-20 Score=165.61 Aligned_cols=133 Identities=14% Similarity=0.125 Sum_probs=104.1
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccc--------------cCCccHHHHHHHcCCHHHHHHHHh---
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELD--------------EEDRSIFHIAVMHRHAETFKLIYE--- 80 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d--------------~~G~t~LH~Aa~~g~~~iv~~Ll~--- 80 (331)
++..|.+|.||||+|+..|+.++++.|++.+++ ++.+| ..|+||||+|+..|+.+++++|++
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 164 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGH 164 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 344556899999999999999999999999998 77777 689999999999999999999999
Q ss_pred hCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-Ccccc-------cccccCCCCch
Q 046030 81 IGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV-KPSFK-------EMKNNDGKTPW 152 (331)
Q Consensus 81 ~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~-------~~~n~~G~Tpl 152 (331)
.|++. |.+|.+|+||||+|+..++...- ......+.++.++ .|+++ +.+|.+|.||+
T Consensus 165 ~ga~~----~~~d~~g~TpLh~A~~~~~~~~~-----------~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL 229 (260)
T 3jxi_A 165 KQADL----RRQDSRGNTVLHALVAIADNTRE-----------NTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPL 229 (260)
T ss_dssp CCCCT----TCCCTTSCCHHHHHHHHCCSSHH-----------HHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHH
T ss_pred cCCCC----cccCCCCCcHHHHHHHhccCchh-----------HHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHH
Confidence 78774 55999999999999998873210 0000123344444 46666 78999999999
Q ss_pred hchHH-hhhhHHHHH
Q 046030 153 ELFTA-EHKTLLEEA 166 (331)
Q Consensus 153 ~la~~-~~~~l~~~~ 166 (331)
|+|.+ ++.++++..
T Consensus 230 ~~A~~~g~~~~v~~L 244 (260)
T 3jxi_A 230 MMAAKTGKIGIFQHI 244 (260)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHH
Confidence 99965 455555443
No 37
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.81 E-value=2.6e-20 Score=160.93 Aligned_cols=135 Identities=19% Similarity=0.149 Sum_probs=103.1
Q ss_pred ccC-CCCCCCCHHHHHHhcCcHHHHHHHHHhC--CCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhccc
Q 046030 18 IPD-GDAANSPQPLQNAHSGNFKFLAVLIRSY--PDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDK 94 (331)
Q Consensus 18 l~~-~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~--~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~ 94 (331)
++. .|..|.||||+|+..|+.++++.|++.+ ++ ++..|..|+||||+|+..|+.+++++|++.|.+. |.+|.
T Consensus 64 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~ 138 (228)
T 2dzn_A 64 LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASV----RIKDK 138 (228)
T ss_dssp GGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS----CCCCT
T ss_pred ccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc----cccCC
Confidence 444 6677888888888888888888888876 55 6777888888888888888888888888887774 44788
Q ss_pred CCCcHHHHHHhhCCCCCCCCC--------------CCcHHhhHHhhhhhhhhhhhc--CcccccccccCCCCchhchHH
Q 046030 95 SGNNLLHLAAQYSNPKPISKV--------------PGAALEMQRELITFKEVETIV--KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 95 ~G~TpLHlAa~~g~~~~~~~l--------------~~~~l~~~~~l~~~~~v~~l~--~~~~~~~~n~~G~Tpl~la~~ 157 (331)
+|+||||+|+..|+.+++++| ...+++.+...+..+.++.++ .|++++.+|++|+||+++|.+
T Consensus 139 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 139 FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 888888888888877765543 123566666666667777776 388999999999999999964
No 38
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.81 E-value=7.6e-20 Score=159.21 Aligned_cols=91 Identities=13% Similarity=0.104 Sum_probs=42.6
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcH
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNL 99 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 99 (331)
..|.+|.||||+|+..|+.++++.|++.+.+ ++..|..|+||||+|+..|+.+++++|++.+......++.+|.+|+||
T Consensus 41 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~ 119 (241)
T 1k1a_A 41 IYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTA 119 (241)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCH
T ss_pred cccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcH
Confidence 3444445555555555555555555554444 344444455555555555555555555544432211123344455555
Q ss_pred HHHHHhhCCCCC
Q 046030 100 LHLAAQYSNPKP 111 (331)
Q Consensus 100 LHlAa~~g~~~~ 111 (331)
||+|+..|+.++
T Consensus 120 L~~A~~~~~~~~ 131 (241)
T 1k1a_A 120 LHVAVNTECQET 131 (241)
T ss_dssp HHHHHHHTCHHH
T ss_pred HHHHHHcCCHHH
Confidence 555555544443
No 39
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.81 E-value=4.7e-21 Score=160.98 Aligned_cols=112 Identities=21% Similarity=0.260 Sum_probs=98.2
Q ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcc-cCCCcHH
Q 046030 22 DAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVD-KSGNNLL 100 (331)
Q Consensus 22 d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d-~~G~TpL 100 (331)
+.+|.||||.|+..|+.++++.|++ +.+ ++.+|..|+||||+|+..|+.+++++|++.|++.+ .+| .+|+|||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~----~~~~~~g~tpL 114 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD----HRDMRGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----CCCSSSSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC----cCCCCCCCCHH
Confidence 4568899999999999999999999 776 88999999999999999999999999999998854 477 8899999
Q ss_pred HHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 101 HLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 101 HlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
|+|+..|+.+++++| +..+++++.+|.+|+||+|+|.+.
T Consensus 115 ~~A~~~~~~~~v~~L-------------------l~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 115 HMAAGYVRPEVVEAL-------------------VELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHTTCHHHHHHH-------------------HHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHhcCcHHHHHHH-------------------HHcCCCCcCCCCCCCCHHHHHHHh
Confidence 999999996654433 225889999999999999999653
No 40
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.81 E-value=4.6e-20 Score=163.59 Aligned_cols=136 Identities=15% Similarity=0.070 Sum_probs=86.2
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHH
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLA 103 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlA 103 (331)
+|+||||+|+..|+.++++.|++.+.+ ++.+|.+|+||||+|+..|+.+++++|++.|++. |.+|.+|+||||+|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A 76 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV----NGVTADWHTPLFNA 76 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC----CCCCCCCCCHHHHH
Confidence 356677777777777777776666666 5666666777777777777777777776666653 33666667777777
Q ss_pred HhhCCCCCCCCC------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH-hhhhHHH
Q 046030 104 AQYSNPKPISKV------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 104 a~~g~~~~~~~l------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~-~~~~l~~ 164 (331)
+..|+.++++.| ...+++.+...+..+.++.++ .+.+++.+|.+|.||+|+|.+ ++.++++
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 151 (261)
T 2xai_A 77 CVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVK 151 (261)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHH
Confidence 766666655433 123445555555555566665 477888888888888888854 3444443
No 41
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.81 E-value=3.6e-20 Score=161.27 Aligned_cols=144 Identities=21% Similarity=0.170 Sum_probs=104.4
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCC---cccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcc
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPD---LVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVD 93 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~---~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d 93 (331)
.++..|.+|.||||+|+..|+.++++.|++.++. .++..|..|+||||+|+..|+.+++++|++.|.+.+ .+|
T Consensus 71 ~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~~~ 146 (241)
T 1k1a_A 71 SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADID----AVD 146 (241)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT----CCC
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc----ccc
Confidence 3556677778888888888888888888877762 256677778888888888888888888888777643 356
Q ss_pred -cCCCcHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH-
Q 046030 94 -KSGNNLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA- 157 (331)
Q Consensus 94 -~~G~TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~- 157 (331)
.+|+||||+|+..|+.+++++| ...+++.+...+..+.++.++ .|++++.+|.+|+||+|+|.+
T Consensus 147 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 147 IKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSH
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhc
Confidence 6778888888887777665543 124566666666666677766 589999999999999999954
Q ss_pred hhhhHHH
Q 046030 158 EHKTLLE 164 (331)
Q Consensus 158 ~~~~l~~ 164 (331)
++.++++
T Consensus 227 ~~~~i~~ 233 (241)
T 1k1a_A 227 RVIDILR 233 (241)
T ss_dssp HHHHHHT
T ss_pred CcHHHHh
Confidence 4555544
No 42
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.81 E-value=3.9e-20 Score=152.51 Aligned_cols=111 Identities=20% Similarity=0.163 Sum_probs=98.4
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHH
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLA 103 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlA 103 (331)
+|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|.+. +.+|..|+||||+|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A 76 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP----QLLGKGRESALSLA 76 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTCCCHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC----CCcCCCCCcHHHHH
Confidence 578999999999999999999999988 8899999999999999999999999999999885 44899999999999
Q ss_pred HhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 104 AQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 104 a~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
+..|+.+++++| +..+.+++.+|.+|.||+|+|...
T Consensus 77 ~~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~t~L~~A~~~ 112 (167)
T 3v31_A 77 CSKGYTDIVKML-------------------LDCGVDVNEYDWNGGTPLLYAVHG 112 (167)
T ss_dssp HHHTCHHHHHHH-------------------HHHTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHcCCHHHHHHH-------------------HHCCCCCCcCCCCCCCHHHHHHHc
Confidence 999986654332 224788999999999999999653
No 43
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.80 E-value=2.5e-20 Score=171.04 Aligned_cols=95 Identities=13% Similarity=0.044 Sum_probs=81.5
Q ss_pred ecccC-CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCC---HHHHHHHHhhC-Cchhhhhh
Q 046030 16 VSIPD-GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRH---AETFKLIYEIG-FSKELIAT 90 (331)
Q Consensus 16 ~~l~~-~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~---~~iv~~Ll~~~-~~~~~~in 90 (331)
..++. .|.+|.||||+|+..|+.++|+.|++++++ ++.+|.+|+||||+|+.+|+ .++++.|++.+ .+ +|
T Consensus 121 ~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~----~~ 195 (327)
T 1sw6_A 121 LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC----LI 195 (327)
T ss_dssp CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG----GG
T ss_pred CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc----cc
Confidence 34566 799999999999999999999999999999 88999999999999999998 67888888776 33 46
Q ss_pred hcccCCCcHHHHHHh----hCCCCCCCCC
Q 046030 91 YVDKSGNNLLHLAAQ----YSNPKPISKV 115 (331)
Q Consensus 91 ~~d~~G~TpLHlAa~----~g~~~~~~~l 115 (331)
.+|.+|+||||+|+. .|+.++++.+
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~g~~~~v~~L 224 (327)
T 1sw6_A 196 LEDSMNRTILHHIIITSGMTGCSAAAKYY 224 (327)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHccccccHHHHHHH
Confidence 699999999999998 6776655443
No 44
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.80 E-value=8.3e-20 Score=158.46 Aligned_cols=127 Identities=16% Similarity=0.152 Sum_probs=102.6
Q ss_pred cCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCccccccc-------------CCccHHHHHHHcCCHHHHHHHHhhCCch
Q 046030 19 PDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDE-------------EDRSIFHIAVMHRHAETFKLIYEIGFSK 85 (331)
Q Consensus 19 ~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~-------------~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~ 85 (331)
+..|.+|.||||+|+..|+.++++.|++.+++ ++..+. .|+||||+|+..|+.+++++|++.|++.
T Consensus 69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 147 (232)
T 2rfa_A 69 TSELYEGQTALHIAVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI 147 (232)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 45667899999999999999999999999988 555554 7999999999999999999999999885
Q ss_pred hhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-Ccccc------cccccCCCCchhchHH-
Q 046030 86 ELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV-KPSFK------EMKNNDGKTPWELFTA- 157 (331)
Q Consensus 86 ~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~------~~~n~~G~Tpl~la~~- 157 (331)
|.+|.+|+||||+|+..|+.+++..+ ++.++ .+++. +.+|.+|+||+|+|.+
T Consensus 148 ----~~~d~~g~t~L~~A~~~~~~~~~~~i----------------~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~ 207 (232)
T 2rfa_A 148 ----RAQDSLGNTVLHILILQPNKTFACQM----------------YNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVE 207 (232)
T ss_dssp ----TCCCTTSCCHHHHHHTCSCHHHHHHH----------------HHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHcCChHHHHHH----------------HHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHc
Confidence 55999999999999999986643111 23333 35544 5899999999999965
Q ss_pred hhhhHHHHH
Q 046030 158 EHKTLLEEA 166 (331)
Q Consensus 158 ~~~~l~~~~ 166 (331)
++.++++..
T Consensus 208 g~~~~v~~L 216 (232)
T 2rfa_A 208 GNIVMFQHL 216 (232)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 455655443
No 45
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.80 E-value=2.3e-20 Score=163.49 Aligned_cols=135 Identities=17% Similarity=0.141 Sum_probs=101.3
Q ss_pred cCCceeEEEecccCC-----CCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhh
Q 046030 7 NGGKTYQVRVSIPDG-----DAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEI 81 (331)
Q Consensus 7 ~~g~~~~~~~~l~~~-----d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~ 81 (331)
+.|+.+.++..++.+ +..|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+.+|+.+++++|++.
T Consensus 14 ~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 92 (239)
T 1ycs_B 14 RTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALHNAVCAGHTEIVKFLVQF 92 (239)
T ss_dssp -----------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred hhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 345555555555543 24578999999999999999999999998 899999999999999999999999999999
Q ss_pred CCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCC-Cchhch---HH
Q 046030 82 GFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGK-TPWELF---TA 157 (331)
Q Consensus 82 ~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~-Tpl~la---~~ 157 (331)
|++. |.+|.+|+||||+|+..|+.+++++| +..+++++.+|.+|. ||+|+| .+
T Consensus 93 ga~~----~~~d~~g~tpL~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~~~~t~l~~a~~~~~ 149 (239)
T 1ycs_B 93 GVNV----NAADSDGWTPLHCAASCNNVQVCKFL-------------------VESGAAVFAMTYSDMQTAADKCEEMEE 149 (239)
T ss_dssp TCCT----TCCCTTCCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCSSSCCCHHHHCCSSST
T ss_pred CCCC----CccCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCcceecCCCCcchHHHHHHhhh
Confidence 9884 55999999999999999996654433 236889999998887 999998 33
Q ss_pred hhhhHHHH
Q 046030 158 EHKTLLEE 165 (331)
Q Consensus 158 ~~~~l~~~ 165 (331)
++.++++.
T Consensus 150 g~~~~~~~ 157 (239)
T 1ycs_B 150 GYTQCSQF 157 (239)
T ss_dssp TCCCHHHH
T ss_pred ccHHHHHH
Confidence 45565543
No 46
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=1.7e-20 Score=145.19 Aligned_cols=109 Identities=19% Similarity=0.201 Sum_probs=94.6
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcH
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNL 99 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 99 (331)
-+|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. +.+|.+|+||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~d~~g~tp 78 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV----NARSKDGNTP 78 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT----TCCCTTCCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC----cccCCCCCCH
Confidence 3678899999999999999999999999998 8899999999999999999999999999999885 5599999999
Q ss_pred HHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCch
Q 046030 100 LHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPW 152 (331)
Q Consensus 100 LHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl 152 (331)
||+|+..++.+++++| +..|++++.++.+|.||-
T Consensus 79 l~~A~~~~~~~~~~~L-------------------l~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKLL-------------------DAKGADVNARSWGSSHHH 112 (115)
T ss_dssp THHHHTTTCHHHHHHH-------------------HTTSSSHHHHSCCCC---
T ss_pred HHHHHHCCCHHHHHHH-------------------HHcCCCCCcCCccccccc
Confidence 9999999986654332 236899999999999984
No 47
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.80 E-value=5.5e-20 Score=164.77 Aligned_cols=144 Identities=14% Similarity=0.125 Sum_probs=91.7
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHH-----HcCCHHHHHHHHhhCCchhhhhhhc
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAV-----MHRHAETFKLIYEIGFSKELIATYV 92 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa-----~~g~~~iv~~Ll~~~~~~~~~in~~ 92 (331)
++..|.+|.||||+|+..|+.++++.|++.++..++..|..|+||||+|+ ..++.+++++|++.|... +..
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~----~~~ 179 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN----AKA 179 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT----CCC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc----ccc
Confidence 67889999999999999999999999999988336666666555555555 334455555555555432 224
Q ss_pred ccCCCcHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc--CcccccccccCCCCchhchHH
Q 046030 93 DKSGNNLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV--KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 93 d~~G~TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~--~~~~~~~~n~~G~Tpl~la~~ 157 (331)
|.+|+||||+|+..|+.+++++| ...+++.+...+..+.++.++ .+++++.+|.+|+||+++|.+
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~ 259 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALD 259 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH
Confidence 45555555555555554443332 112334444444444555555 478889999999999999854
Q ss_pred -hhhhHHHH
Q 046030 158 -EHKTLLEE 165 (331)
Q Consensus 158 -~~~~l~~~ 165 (331)
++.++++.
T Consensus 260 ~g~~~iv~~ 268 (276)
T 4hbd_A 260 AGQSEIASM 268 (276)
T ss_dssp HTCHHHHHH
T ss_pred cCCHHHHHH
Confidence 34555443
No 48
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.80 E-value=3e-20 Score=163.47 Aligned_cols=110 Identities=22% Similarity=0.282 Sum_probs=97.7
Q ss_pred CCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcc-cCCCcHHH
Q 046030 23 AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVD-KSGNNLLH 101 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d-~~G~TpLH 101 (331)
.+|.||||.|+..|+.++++.|++ +.+ ++.+|..|+||||+|+.+|+.+++++|++.|++.+ .+| .+|+||||
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----~~~~~~g~t~L~ 116 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD----HRDMRGGLTALH 116 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT----CCCSSSCCCHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC----cCCCCCCCCHHH
Confidence 468999999999999999999999 777 88999999999999999999999999999999854 477 88999999
Q ss_pred HHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 102 LAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 102 lAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
+|+..|+.+++++| +..|++++.+|.+|.||+|+|.+
T Consensus 117 ~A~~~g~~~~v~~L-------------------l~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 117 MAAGYVRPEVVEAL-------------------VELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHcCCHHHHHHH-------------------HHCCCCCCCCCCCCCcHHHHHHH
Confidence 99999997654433 23688999999999999999975
No 49
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.80 E-value=5.9e-20 Score=160.17 Aligned_cols=123 Identities=15% Similarity=0.133 Sum_probs=103.7
Q ss_pred cCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCc
Q 046030 19 PDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNN 98 (331)
Q Consensus 19 ~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~T 98 (331)
+..+.+|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+|
T Consensus 15 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~----n~~d~~g~t 89 (229)
T 2vge_A 15 RRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGANV----NSPDSHGWT 89 (229)
T ss_dssp CCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTCCC
T ss_pred cccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC----CCCCCCCCC
Confidence 34556788999999999999999999999998 7899999999999999999999999999999884 559999999
Q ss_pred HHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccc-cCCCCchhch--H-HhhhhHHHH
Q 046030 99 LLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKN-NDGKTPWELF--T-AEHKTLLEE 165 (331)
Q Consensus 99 pLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n-~~G~Tpl~la--~-~~~~~l~~~ 165 (331)
|||+|+..|+.+++++| +..+++++.++ .+|+||+++| . .++.++++.
T Consensus 90 pLh~A~~~g~~~~v~~L-------------------l~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~ 141 (229)
T 2vge_A 90 PLHCAASCNDTVICMAL-------------------VQHGAAIFATTLSDGATAFEKCDPYREGYADCATY 141 (229)
T ss_dssp HHHHHHHTTCHHHHHHH-------------------HTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHH-------------------HHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHH
Confidence 99999999996654433 23588888886 6999999998 3 345555443
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.80 E-value=6.7e-20 Score=163.33 Aligned_cols=128 Identities=14% Similarity=0.136 Sum_probs=101.3
Q ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCccccccc--------------CCccHHHHHHHcCCHHHHHHHHh---hCC
Q 046030 21 GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDE--------------EDRSIFHIAVMHRHAETFKLIYE---IGF 83 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~--------------~G~t~LH~Aa~~g~~~iv~~Ll~---~~~ 83 (331)
.|.+|.||||+|+..|+.++++.|++.+++ ++.+|. .|+||||+|+..|+.+++++|++ .|+
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga 175 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA 175 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC
Confidence 667899999999999999999999999998 777776 79999999999999999999999 888
Q ss_pred chhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-Cccccc-------ccccCCCCchhch
Q 046030 84 SKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV-KPSFKE-------MKNNDGKTPWELF 155 (331)
Q Consensus 84 ~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~~-------~~n~~G~Tpl~la 155 (331)
+. |.+|.+|+||||+|+..|+...- ......+.++.++ .+++++ .+|.+|+||+|+|
T Consensus 176 d~----~~~d~~g~tpLh~A~~~~~~~~~-----------~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 176 DI----SARDSVGNTVLHALVEVADNTVD-----------NTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240 (273)
T ss_dssp CT----TCCCTTSCCHHHHHHHHCCSCHH-----------HHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred Cc----eeeCCCCCcHHHHHHHccCcchh-----------HHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHH
Confidence 74 55999999999999998874310 0000012244444 466664 5999999999999
Q ss_pred HH-hhhhHHH
Q 046030 156 TA-EHKTLLE 164 (331)
Q Consensus 156 ~~-~~~~l~~ 164 (331)
.+ ++.++++
T Consensus 241 ~~~g~~~iv~ 250 (273)
T 2pnn_A 241 ASSGKIGVLA 250 (273)
T ss_dssp HHTTCHHHHH
T ss_pred HHhChHHHHH
Confidence 65 4555544
No 51
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.80 E-value=1.5e-19 Score=157.18 Aligned_cols=136 Identities=16% Similarity=0.177 Sum_probs=110.2
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++.+|.+|.||||.|+..|+.++++.|++.+.+ ++..|..|+||||+|+..|+.+++++|++.|.+. +.+|.+|
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g 77 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV----DPKDAEG 77 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC----CCCCTTS
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC----CCCCCCC
Confidence 4677888999999999999999999999999988 7888999999999999999999999999998874 4489999
Q ss_pred CcHHHHHHhhCCCCCCCCCC--------------CcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH
Q 046030 97 NNLLHLAAQYSNPKPISKVP--------------GAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l~--------------~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 157 (331)
.||||+|+..|+.++++++. ..+++.+...+..+.++.++ .+.+++.+|.+|.||+|+|..
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 153 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAF 153 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Confidence 99999999999877665431 13455555555566666665 467777788888888887754
No 52
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.80 E-value=1.6e-19 Score=155.92 Aligned_cols=136 Identities=18% Similarity=0.143 Sum_probs=102.9
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhC--CCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSY--PDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~--~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
..|.+|.||||+|+..|+.++++.|++.+ ++.....|..|+||||+|+..|+.+++++|++.|...+ ++.+|.+|+
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~--~~~~~~~g~ 108 (228)
T 2dzn_A 31 QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPD--LNKITNQGV 108 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCC--TTCCCTTCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcc--cccCCcCCC
Confidence 46788899999999999999999999988 55222378889999999999999999999998873322 256888999
Q ss_pred cHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhcC-c-ccccccccCCCCchhchHH
Q 046030 98 NLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIVK-P-SFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~~-~-~~~~~~n~~G~Tpl~la~~ 157 (331)
||||+|+..|+.+++++| ...+++.+...+..+.++.++. + .+++.+|.+|+||+|+|..
T Consensus 109 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~ 183 (228)
T 2dzn_A 109 TCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 183 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHH
T ss_pred CHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHH
Confidence 999999998887766543 1245666666666666766663 4 6777777888888887754
No 53
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.79 E-value=8.9e-20 Score=151.11 Aligned_cols=111 Identities=20% Similarity=0.174 Sum_probs=97.4
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHH
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAA 104 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa 104 (331)
+.||||.|+..|+.+.++.|++.+++.++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+||||+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~ 77 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP----HILAKERESALSLAS 77 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT----TCCCTTCCCHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc----hhhcccCCCHHHHHH
Confidence 4689999999999999999999999878899999999999999999999999999999885 458999999999999
Q ss_pred hhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 105 QYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 105 ~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
..|+.+++++| +..+.+++.+|.+|.||+|+|...
T Consensus 78 ~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~t~L~~A~~~ 112 (172)
T 3v30_A 78 TGGYTDIVGLL-------------------LERDVDINIYDWNGGTPLLYAVRG 112 (172)
T ss_dssp HTTCHHHHHHH-------------------HTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HCCCHHHHHHH-------------------HHcCCCCCCCCCCCCCHHHHHHHc
Confidence 99996654332 235888999999999999999653
No 54
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.79 E-value=1.7e-19 Score=165.37 Aligned_cols=93 Identities=22% Similarity=0.156 Sum_probs=85.4
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++..|..|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|.
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~----~~~~~~g~ 125 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV----NAMDLWQF 125 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTCC
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC----CCCCCCCC
Confidence 566788999999999999999999999999998 8899999999999999999999999999999885 45899999
Q ss_pred cHHHHHHhhCCCCCCCCC
Q 046030 98 NLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l 115 (331)
||||+|+..|+.+++++|
T Consensus 126 t~L~~A~~~~~~~~v~~L 143 (351)
T 3utm_A 126 TPLHEAASKNRVEVCSLL 143 (351)
T ss_dssp CHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHH
Confidence 999999999998876654
No 55
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.79 E-value=2.3e-19 Score=159.02 Aligned_cols=139 Identities=14% Similarity=0.112 Sum_probs=84.0
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhh----------
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKEL---------- 87 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~---------- 87 (331)
++..|.+|.||||+|+..|+.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|++.+.
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~ 107 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHE 107 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHH
Confidence 445556666666666666666666666666665 556666666666666666666666666665544321
Q ss_pred ------------------hhhhcccCCCcHHHHHHhhCCCCCCCCC------------CCcHHhhHHhhhhhhhhhhhc-
Q 046030 88 ------------------IATYVDKSGNNLLHLAAQYSNPKPISKV------------PGAALEMQRELITFKEVETIV- 136 (331)
Q Consensus 88 ------------------~in~~d~~G~TpLHlAa~~g~~~~~~~l------------~~~~l~~~~~l~~~~~v~~l~- 136 (331)
.+|.+|.+|+||||+|+..|+.+++++| ...+++.+...+..+.++.++
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~ 187 (261)
T 2xai_A 108 AARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMD 187 (261)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHH
Confidence 0244566666666666666665554433 123455555555556666555
Q ss_pred CcccccccccCCCCchhchHH
Q 046030 137 KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 137 ~~~~~~~~n~~G~Tpl~la~~ 157 (331)
.|++++.+|++|+||+|+|.+
T Consensus 188 ~gad~~~~d~~g~tpl~~A~~ 208 (261)
T 2xai_A 188 FGADTQAKNAEGKRPVELVPP 208 (261)
T ss_dssp TTCCTTCCCTTSCCGGGGSCT
T ss_pred cCCCCCCcCCCCCChhhhccc
Confidence 477777777777777777753
No 56
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=7e-20 Score=136.41 Aligned_cols=86 Identities=27% Similarity=0.387 Sum_probs=78.1
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHH
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLA 103 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlA 103 (331)
+|+||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~----~~~d~~g~t~l~~A 75 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV----NAKDKNGRTPLHLA 75 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CccCCCCCCHHHHH
Confidence 478999999999999999999999998 8999999999999999999999999999999885 45999999999999
Q ss_pred HhhCCCCCCCC
Q 046030 104 AQYSNPKPISK 114 (331)
Q Consensus 104 a~~g~~~~~~~ 114 (331)
+..|+.+++++
T Consensus 76 ~~~~~~~~~~~ 86 (93)
T 1n0q_A 76 ARNGHLEVVKL 86 (93)
T ss_dssp HHTTCHHHHHH
T ss_pred HHcCCHHHHHH
Confidence 99999766544
No 57
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.79 E-value=1.1e-19 Score=168.66 Aligned_cols=132 Identities=17% Similarity=0.164 Sum_probs=110.5
Q ss_pred EEecccCCCCCCCCHHHHHHhcC--cHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCc-hhhhhh
Q 046030 14 VRVSIPDGDAANSPQPLQNAHSG--NFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFS-KELIAT 90 (331)
Q Consensus 14 ~~~~l~~~d~~g~t~Lh~Aa~~G--~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~-~~~~in 90 (331)
....++..|.+|.||||+|+..| +.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|++ ....+|
T Consensus 127 ~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 205 (364)
T 3ljn_A 127 NEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLD 205 (364)
T ss_dssp EEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTT
T ss_pred hhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccc
Confidence 34445558889999999999999 99999999999998 889999999999999999999999999999887 122236
Q ss_pred hcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHHH
Q 046030 91 YVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLEE 165 (331)
Q Consensus 91 ~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~~ 165 (331)
.+|.+|+||||+|+..|+.+++++| +..|++++.+|.+|.||+++|.+ ++.++++.
T Consensus 206 ~~~~~g~t~L~~A~~~g~~~~v~~L-------------------l~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~ 262 (364)
T 3ljn_A 206 YANKQGNSHLHWAILINWEDVAMRF-------------------VEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKE 262 (364)
T ss_dssp CCCTTCCCTTHHHHTTTCHHHHHHH-------------------HTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCCCCCCCCHHHHHHHhChHHHHHH
Confidence 6999999999999999997654433 23689999999999999999965 45555443
No 58
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.79 E-value=1e-19 Score=151.91 Aligned_cols=114 Identities=14% Similarity=0.155 Sum_probs=97.3
Q ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHH
Q 046030 22 DAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLH 101 (331)
Q Consensus 22 d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH 101 (331)
+.++.++||.|+..|+.++++.|++.++..++..|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+||||
T Consensus 2 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~ 77 (179)
T 3f6q_A 2 SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI----NVMNRGDDTPLH 77 (179)
T ss_dssp -----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTCCCHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC----CCcCCCCCCHHH
Confidence 4567899999999999999999999977768999999999999999999999999999999885 559999999999
Q ss_pred HHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 102 LAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 102 lAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
+|+..|+.+++++| +..+.+++.+|.+|.||+|+|...
T Consensus 78 ~A~~~~~~~~v~~L-------------------l~~g~~~~~~d~~g~t~L~~A~~~ 115 (179)
T 3f6q_A 78 LAASHGHRDIVQKL-------------------LQYKADINAVNEHGNVPLHYACFW 115 (179)
T ss_dssp HHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHcCCHHHHHHH-------------------HHcCCCCCccCCCCCCHHHHHHHc
Confidence 99999996654332 235889999999999999999653
No 59
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.79 E-value=4.3e-20 Score=151.97 Aligned_cols=115 Identities=17% Similarity=0.180 Sum_probs=99.4
Q ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHH
Q 046030 21 GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLL 100 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 100 (331)
.|.+|.||||.|+..|+.++++.|++..+...+..|..|+||||+|+..|+.+++++|++.|.+. |.+|.+|+|||
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L 79 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV----HAKDKGGLVPL 79 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC----CccCCCCCCHH
Confidence 45678899999999999999999999777667888999999999999999999999999999885 55999999999
Q ss_pred HHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh
Q 046030 101 HLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE 158 (331)
Q Consensus 101 HlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~ 158 (331)
|+|+..|+.+++++| +..+.+++.+|.+|.||+|+|...
T Consensus 80 ~~A~~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~t~L~~A~~~ 118 (165)
T 3twr_A 80 HNACSYGHYEVAELL-------------------VKHGAVVNVADLWKFTPLHEAAAK 118 (165)
T ss_dssp HHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHcCcHHHHHHH-------------------HhCCCCCCCcCCCCCCHHHHHHHc
Confidence 999999996654332 236888999999999999999653
No 60
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.79 E-value=2.7e-19 Score=163.95 Aligned_cols=139 Identities=16% Similarity=0.128 Sum_probs=99.2
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhh---------
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELI--------- 88 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~--------- 88 (331)
++.+|.+|.||||+|+..|+.++++.|++++++ ++..|..|+||||+|+..|+.+++++|++.|++.+..
T Consensus 84 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~ 162 (351)
T 3utm_A 84 VHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVD 162 (351)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchH
Confidence 566788999999999999999999999999988 7889999999999999999999999999988764320
Q ss_pred -----------------------------------------hhhcccCCCcHHHHHHhhCCCC---CCCCC---------
Q 046030 89 -----------------------------------------ATYVDKSGNNLLHLAAQYSNPK---PISKV--------- 115 (331)
Q Consensus 89 -----------------------------------------in~~d~~G~TpLHlAa~~g~~~---~~~~l--------- 115 (331)
....+..|+||||+|+..++.. ++++|
T Consensus 163 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~ 242 (351)
T 3utm_A 163 MAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNE 242 (351)
T ss_dssp HCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTC
T ss_pred HHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCC
Confidence 0012345566666666664432 21111
Q ss_pred ----CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH
Q 046030 116 ----PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 116 ----~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 157 (331)
...+++.+...+..+.++.++ .|++++.+|.+|+||+|+|.+
T Consensus 243 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~ 289 (351)
T 3utm_A 243 KNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAAL 289 (351)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 123555555555555566555 366666777777777777643
No 61
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=4.6e-19 Score=159.39 Aligned_cols=138 Identities=14% Similarity=0.109 Sum_probs=84.6
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhh----------
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKEL---------- 87 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~---------- 87 (331)
++.+|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|.+.+.
T Consensus 85 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~ 163 (285)
T 3d9h_A 85 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHE 163 (285)
T ss_dssp SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHH
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHH
Confidence 445566677777777777777777777776666 566666677777777776666666666666554321
Q ss_pred ------------------hhhhcccCCCcHHHHHHhhCCCCCCCCC------------CCcHHhhHHhhhhhhhhhhhc-
Q 046030 88 ------------------IATYVDKSGNNLLHLAAQYSNPKPISKV------------PGAALEMQRELITFKEVETIV- 136 (331)
Q Consensus 88 ------------------~in~~d~~G~TpLHlAa~~g~~~~~~~l------------~~~~l~~~~~l~~~~~v~~l~- 136 (331)
.+|.+|.+|+||||+|+..|+.+++++| ...+++.+...+..+.++.++
T Consensus 164 A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 243 (285)
T 3d9h_A 164 AARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMD 243 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 0234556666666666666665554433 113444555555555555555
Q ss_pred CcccccccccCCCCchhchH
Q 046030 137 KPSFKEMKNNDGKTPWELFT 156 (331)
Q Consensus 137 ~~~~~~~~n~~G~Tpl~la~ 156 (331)
.|++++.+|.+|+||+|+|.
T Consensus 244 ~gad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 244 FGADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp TTCCTTCCCTTSCCGGGGSC
T ss_pred CCCCCCCcCCCCCCHHHHhc
Confidence 46667777777777777776
No 62
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.78 E-value=1.6e-19 Score=162.46 Aligned_cols=89 Identities=17% Similarity=0.216 Sum_probs=46.8
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++.+|.+|.||||+|+..|+.++++.|++.+++ ++.. +|+||||+|+..|+.+++++|++.|++. |.+|.+|+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~----~~~d~~g~ 96 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGAL-KNLL--ENEFPLHQAATLEDTKIVKILLFSGLDD----SQFDDKGN 96 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-GSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCT----TCCCTTSC
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCC----CCcCCCCC
Confidence 344555555555555555555555555555544 3333 2555555555555555555555555542 22555555
Q ss_pred cHHHHHHhhCCCCCCC
Q 046030 98 NLLHLAAQYSNPKPIS 113 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~ 113 (331)
||||+|+..|+.++++
T Consensus 97 t~L~~A~~~g~~~~v~ 112 (285)
T 3kea_A 97 TALYYAVDSGNMQTVK 112 (285)
T ss_dssp CHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHcCCHHHHH
Confidence 5555555555554443
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.78 E-value=1.7e-19 Score=149.22 Aligned_cols=118 Identities=20% Similarity=0.292 Sum_probs=100.4
Q ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHH
Q 046030 22 DAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLH 101 (331)
Q Consensus 22 d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH 101 (331)
...+.++||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|.+. +.+|.+|+||||
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~ 85 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV----NAVDHAGMTPLR 85 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CccCCCCCCHHH
Confidence 44567899999999999999999999998 7899999999999999999999999999999875 458999999999
Q ss_pred HHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh-hhhHH
Q 046030 102 LAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE-HKTLL 163 (331)
Q Consensus 102 lAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~-~~~l~ 163 (331)
+|+..|+.+++++| +..+.+++.+|.+|.||+|+|... +.+++
T Consensus 86 ~A~~~~~~~~~~~L-------------------l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 129 (169)
T 2y1l_E 86 LAALFGHLEIVEVL-------------------LKNGADVNANDMEGHTPLHLAAMFGHLEIV 129 (169)
T ss_dssp HHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHcCCHHHHHHH-------------------HHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 99999986654332 235888999999999999999653 44443
No 64
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.78 E-value=2.8e-19 Score=160.94 Aligned_cols=89 Identities=18% Similarity=0.178 Sum_probs=81.5
Q ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHH
Q 046030 22 DAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLH 101 (331)
Q Consensus 22 d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH 101 (331)
+.+|.||||.||..|+.++++.|++.+++ ++..|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+||||
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~----~~~~~~g~tpL~ 111 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGAD-INYANVDGLTALHQACIDDNVDMVKFLVENGANI----NQPDNEGWIPLH 111 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC----CCCCCCCCcHHH
Confidence 34678999999999999999999999998 8899999999999999999999999999999885 559999999999
Q ss_pred HHHhhCCCCCCCCC
Q 046030 102 LAAQYSNPKPISKV 115 (331)
Q Consensus 102 lAa~~g~~~~~~~l 115 (331)
+|+..|+.+++++|
T Consensus 112 ~A~~~g~~~~v~~L 125 (299)
T 1s70_B 112 AAASCGYLDIAEYL 125 (299)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHH
Confidence 99999998876654
No 65
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.77 E-value=1.1e-19 Score=160.24 Aligned_cols=114 Identities=18% Similarity=0.159 Sum_probs=97.5
Q ss_pred CCCCCCCHHHHHHhc---CcHHHHHHHHHhCCCcc----------cccccCCccHHHHHHHcCCHHHHHHHHhhCCchhh
Q 046030 21 GDAANSPQPLQNAHS---GNFKFLAVLIRSYPDLV----------HELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKEL 87 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~---G~~~~v~~Ll~~~~~~~----------~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~ 87 (331)
+|.+|.||||+|+.. |+.++++.|++.+++.. ...|..|+||||+|+..|+.+++++|++.|++.+
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~- 117 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH- 117 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-
Confidence 788999999999999 99999999999876621 1235789999999999999999999999998854
Q ss_pred hhhhcccC-------------CCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc---CcccccccccCCCCc
Q 046030 88 IATYVDKS-------------GNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV---KPSFKEMKNNDGKTP 151 (331)
Q Consensus 88 ~in~~d~~-------------G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~---~~~~~~~~n~~G~Tp 151 (331)
.+|.+ |+||||+|+..|+.+++++| +. .|++++.+|.+|+||
T Consensus 118 ---~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L-------------------l~~~~~ga~~n~~d~~g~Tp 175 (256)
T 2etb_A 118 ---LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL-------------------LENPHQPASLEATDSLGNTV 175 (256)
T ss_dssp ---CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHH-------------------HHCSSCCCCTTCCCTTSCCH
T ss_pred ---cccccccccccccccccCCCCHHHHHHHcCCHHHHHHH-------------------HhccccCCCcCccCCCCCCH
Confidence 47776 99999999999997665443 23 588999999999999
Q ss_pred hhchHH
Q 046030 152 WELFTA 157 (331)
Q Consensus 152 l~la~~ 157 (331)
+|+|..
T Consensus 176 Lh~A~~ 181 (256)
T 2etb_A 176 LHALVM 181 (256)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999975
No 66
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.77 E-value=8.6e-20 Score=149.15 Aligned_cols=113 Identities=12% Similarity=0.002 Sum_probs=84.8
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCcc-HHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRS-IFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t-~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
.++..|..|.||||+|+ .|+.++++.|++.+.+ ++.+|..|+| |||+|+..|+.+++++|++.|++. |.+|.+
T Consensus 37 ~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~----~~~d~~ 110 (156)
T 1bi7_B 37 NPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL----DVRDAW 110 (156)
T ss_dssp CTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS----SCCCTT
T ss_pred CCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC----cccCCC
Confidence 35667889999999985 9999999999999988 8899999999 999999999999999999999885 559999
Q ss_pred CCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhc
Q 046030 96 GNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWEL 154 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~l 154 (331)
|+||||+|+..|+.+++++| +..|++++.+|..|.||.+-
T Consensus 111 g~tpl~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 111 GRLPVDLAEELGHRDVARYL-------------------RAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp CCCHHHHHHHHTCHHHHHHH-------------------SSCC----------------
T ss_pred CCCHHHHHHHhCHHHHHHHH-------------------HHcCCCCCccCcCcCccccc
Confidence 99999999999996654332 23689999999999999763
No 67
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.77 E-value=1.9e-19 Score=161.88 Aligned_cols=115 Identities=16% Similarity=0.102 Sum_probs=96.1
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC-CcHHHH
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG-NNLLHL 102 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G-~TpLHl 102 (331)
+|.||||+|+..|+.++++.|++++++ ++.+|..|+||||+|+..|+.+++++|++.|++. +.+|.+| .||||+
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~----~~~~~~g~~t~L~~ 135 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL----MFYGKTGWKTSFYH 135 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG----GGCSSSGGGSHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC----CccCCCCCCCHHHH
Confidence 589999999999999999999999999 8889999999999999999999999999999885 5599999 899999
Q ss_pred HHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-Cccccccccc-CCCCchhchHH-hhhhHHHH
Q 046030 103 AAQYSNPKPISKVPGAALEMQRELITFKEVETIV-KPSFKEMKNN-DGKTPWELFTA-EHKTLLEE 165 (331)
Q Consensus 103 Aa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~-~G~Tpl~la~~-~~~~l~~~ 165 (331)
|+..|+.+++++ ++ .+.+. .+. +|.||+|+|.. ++.++++.
T Consensus 136 A~~~~~~~~v~~--------------------Ll~~g~~~--~~~~~g~t~L~~A~~~g~~~~v~~ 179 (285)
T 3kea_A 136 AVMLNDVSIVSY--------------------FLSEIPST--FDLAILLSCIHITIKNGHVDMMIL 179 (285)
T ss_dssp HHHTTCHHHHHH--------------------HHTTSCTT--CCCSTHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHH--------------------HHhCCCcc--ccccCCccHHHHHHHcChHHHHHH
Confidence 999999665433 33 34433 333 89999999965 44555443
No 68
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=1e-18 Score=165.96 Aligned_cols=132 Identities=15% Similarity=0.187 Sum_probs=69.9
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcH
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNL 99 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 99 (331)
..+.+|.||||+|+..|+.++++.|++.+++ .+..|..|+||||+|+..|+.+++++|++.|.+. |.+|..|+||
T Consensus 240 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~t~ 314 (437)
T 1n11_A 240 AESVQGVTPLHLAAQEGHAEMVALLLSKQAN-GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV----DATTRMGYTP 314 (437)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT----TCCCSSCCCH
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccC----CCCCCCCCCH
Confidence 3444555555555555555555555555555 4455555555555555555555555555555542 3355566666
Q ss_pred HHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchH
Q 046030 100 LHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFT 156 (331)
Q Consensus 100 LHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~ 156 (331)
||+|+..|+.+++++| ...+++.+...+..+.++.++ .|++++.+|.+|+||+++|.
T Consensus 315 L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~ 385 (437)
T 1n11_A 315 LHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 385 (437)
T ss_dssp HHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence 6666666655544433 113344444444444455444 35555555555566655553
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.77 E-value=2.7e-19 Score=145.51 Aligned_cols=114 Identities=18% Similarity=0.172 Sum_probs=96.9
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHH
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAA 104 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa 104 (331)
..+|||.|+..|+.++++.|++.+++ .+ .|..|+||||+|+..|+.+++++|++.|.+. |.+|.+|+||||+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~ 75 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP-FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR----DARTKVDRTPLHMAA 75 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC-CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT----TCCCTTCCCHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC-CC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CCCCCCCCCHHHHHH
Confidence 35899999999999999999999987 33 6899999999999999999999999999885 559999999999999
Q ss_pred hhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh-hhhHH
Q 046030 105 QYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE-HKTLL 163 (331)
Q Consensus 105 ~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~-~~~l~ 163 (331)
..|+.+++++| +..+.+++.+|.+|.||+|+|... +.+++
T Consensus 76 ~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 116 (153)
T 1awc_B 76 SEGHANIVEVL-------------------LKHGADVNAKDMLKMTALHWATEHNHQEVV 116 (153)
T ss_dssp HHTCHHHHHHH-------------------HTTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HcChHHHHHHH-------------------HHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 99986654332 225888999999999999999653 44443
No 70
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.76 E-value=1e-18 Score=148.02 Aligned_cols=131 Identities=17% Similarity=0.140 Sum_probs=106.3
Q ss_pred CCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHH
Q 046030 23 AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHL 102 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHl 102 (331)
..+.||||.|+..|+.+.++.|++.++..++..|.+|+||||+|+..|+.+++++|++.|++. |.+|..|+||||+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~l~~ 78 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI----NLQNSISDSPYLY 78 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CCCCCCCCCHHHH
Confidence 457899999999999999999999988448899999999999999999999999999999885 4499999999999
Q ss_pred HHhhCCCCCCCCCC--------------CcHHhhHHhhhhhhhhhhhcC-c-ccccccccCCCCchhchHH
Q 046030 103 AAQYSNPKPISKVP--------------GAALEMQRELITFKEVETIVK-P-SFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 103 Aa~~g~~~~~~~l~--------------~~~l~~~~~l~~~~~v~~l~~-~-~~~~~~n~~G~Tpl~la~~ 157 (331)
|+..|+.++++.+. ..+++.+...+..+.++.++. + .+++.+|.+|.||+|+|..
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 149 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVG 149 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHH
Confidence 99999987765431 134555555555666666653 3 6677777777777777754
No 71
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.76 E-value=1.4e-19 Score=161.20 Aligned_cols=116 Identities=16% Similarity=0.168 Sum_probs=97.5
Q ss_pred CCCCCCCCHHHHHHhc---CcHHHHHHHHHhCCCc----------ccccccCCccHHHHHHHcCCHHHHHHHHhhCCchh
Q 046030 20 DGDAANSPQPLQNAHS---GNFKFLAVLIRSYPDL----------VHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKE 86 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~---G~~~~v~~Ll~~~~~~----------~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~ 86 (331)
..|.+|.||||+|+.. |+.++++.|++.+++. ....|..|+||||+|+..|+.+++++|++.|++.+
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 128 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ 128 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 3478899999999986 9999999999986541 12357799999999999999999999999998854
Q ss_pred hhhhhccc--------------CCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc---CcccccccccCCC
Q 046030 87 LIATYVDK--------------SGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV---KPSFKEMKNNDGK 149 (331)
Q Consensus 87 ~~in~~d~--------------~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~---~~~~~~~~n~~G~ 149 (331)
.+|. +|+||||+|+..|+.+++++| +. .+++++.+|.+|+
T Consensus 129 ----~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L-------------------l~~~~~gad~~~~d~~g~ 185 (273)
T 2pnn_A 129 ----AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL-------------------LQNSWQPADISARDSVGN 185 (273)
T ss_dssp ----CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH-------------------HHCSSCCCCTTCCCTTSC
T ss_pred ----ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH-------------------HhcccCCCCceeeCCCCC
Confidence 4676 799999999999997665443 23 5789999999999
Q ss_pred CchhchHHh
Q 046030 150 TPWELFTAE 158 (331)
Q Consensus 150 Tpl~la~~~ 158 (331)
||||+|.+.
T Consensus 186 tpLh~A~~~ 194 (273)
T 2pnn_A 186 TVLHALVEV 194 (273)
T ss_dssp CHHHHHHHH
T ss_pred cHHHHHHHc
Confidence 999999763
No 72
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.76 E-value=1.8e-19 Score=147.59 Aligned_cols=116 Identities=17% Similarity=0.262 Sum_probs=98.9
Q ss_pred CCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHH
Q 046030 24 ANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLA 103 (331)
Q Consensus 24 ~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlA 103 (331)
...||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+. |+.+++++|++.|.+. |.+|.+|+||||+|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP----DLKDRTGFAVIHDA 77 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT----TCCCTTSCCHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC----CCCCCCCCCHHHHH
Confidence 456899999999999999999999988 78999999999999999 9999999999999885 45899999999999
Q ss_pred HhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh-hhhHHH
Q 046030 104 AQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE-HKTLLE 164 (331)
Q Consensus 104 a~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~-~~~l~~ 164 (331)
+..|+.+++++| +..+.+++.+|.+|+||+|+|... +.++++
T Consensus 78 ~~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 120 (162)
T 1ihb_A 78 ARAGFLDTLQTL-------------------LEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120 (162)
T ss_dssp HHHTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHH-------------------HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 999986654332 225888999999999999999653 444443
No 73
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.76 E-value=7.7e-19 Score=155.05 Aligned_cols=113 Identities=17% Similarity=0.171 Sum_probs=95.8
Q ss_pred CCCCCCHHHHHH---hcCcHHHHHHHHHhCCCc----------ccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhh
Q 046030 22 DAANSPQPLQNA---HSGNFKFLAVLIRSYPDL----------VHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELI 88 (331)
Q Consensus 22 d~~g~t~Lh~Aa---~~G~~~~v~~Ll~~~~~~----------~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~ 88 (331)
|.+|.||||+|+ ..|+.++++.|++.+.+. ....|..|+||||+|+..|+.+++++|++.|++.+
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-- 120 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-- 120 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT--
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC--
Confidence 477999999999 789999999999976431 34556699999999999999999999999998854
Q ss_pred hhhcc--------------cCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc---CcccccccccCCCCc
Q 046030 89 ATYVD--------------KSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV---KPSFKEMKNNDGKTP 151 (331)
Q Consensus 89 in~~d--------------~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~---~~~~~~~~n~~G~Tp 151 (331)
.+| .+|+||||+|+..|+.+++++| +. .+++++.+|.+|+||
T Consensus 121 --~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L-------------------l~~~~~ga~~~~~d~~g~Tp 179 (260)
T 3jxi_A 121 --AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL-------------------TENGHKQADLRRQDSRGNTV 179 (260)
T ss_dssp --CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH-------------------HHCSSCCCCTTCCCTTSCCH
T ss_pred --ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH-------------------HhccccCCCCcccCCCCCcH
Confidence 477 6899999999999997665443 23 588999999999999
Q ss_pred hhchHH
Q 046030 152 WELFTA 157 (331)
Q Consensus 152 l~la~~ 157 (331)
+|+|..
T Consensus 180 Lh~A~~ 185 (260)
T 3jxi_A 180 LHALVA 185 (260)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999975
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.76 E-value=3.3e-19 Score=145.16 Aligned_cols=115 Identities=16% Similarity=0.175 Sum_probs=97.3
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHH
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAA 104 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa 104 (331)
+.||||.|+..|+.++++.|++..+..++..|..|+||||+ +.+|+.+++++|++.|++. |.+|.+|+||||+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~~A~ 76 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP----NVQDTSGTSPVHDAA 76 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC----CCcCCCCCCHHHHHH
Confidence 46899999999999999999998443478899999999999 9999999999999999885 559999999999999
Q ss_pred hhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHHh-hhhHH
Q 046030 105 QYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTAE-HKTLL 163 (331)
Q Consensus 105 ~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~~-~~~l~ 163 (331)
..|+.+++++| +..|.+++.+|.+|+||+|+|... +.+++
T Consensus 77 ~~~~~~~v~~L-------------------l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 117 (156)
T 1bd8_A 77 RTGFLDTLKVL-------------------VEHGADVNVPDGTGALPIHLAVQEGHTAVV 117 (156)
T ss_dssp HTTCHHHHHHH-------------------HHTTCCSCCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HcCcHHHHHHH-------------------HHcCCCCCCcCCCCCcHHHHHHHhChHHHH
Confidence 99986654332 235788999999999999999653 34443
No 75
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.75 E-value=6.8e-19 Score=167.12 Aligned_cols=143 Identities=15% Similarity=0.134 Sum_probs=108.2
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++..|..|.||||+||..|+.++|+.|++++.+ ++..|..|+||||+|+..|+.+++++|++.|++. |.+|.+|
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~----~~~~~~g 80 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGAS-PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV----NAKAKDD 80 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTTCC-SCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS----SCCCTTS
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC----CCCCCCC
Confidence 4677888999999999999999999999999988 7889999999999999999999999999999874 5599999
Q ss_pred CcHHHHHHhhCCCCCCCCCC-------------CcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH-hhhh
Q 046030 97 NNLLHLAAQYSNPKPISKVP-------------GAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA-EHKT 161 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l~-------------~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~-~~~~ 161 (331)
+||||+|+..|+.+++++|. ..+++.+...+..+.++.++ .+.+.+..+.+|.||++.|.+ ++.+
T Consensus 81 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~ 160 (437)
T 1n11_A 81 QTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR 160 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 99999999999988776541 23455565556666666665 466667777888888888754 3444
Q ss_pred HHH
Q 046030 162 LLE 164 (331)
Q Consensus 162 l~~ 164 (331)
+++
T Consensus 161 ~v~ 163 (437)
T 1n11_A 161 VAE 163 (437)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 76
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.75 E-value=8.5e-19 Score=160.90 Aligned_cols=134 Identities=15% Similarity=0.122 Sum_probs=100.8
Q ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHhCCCccccccc-CCccHHHHHHHcCCHHHHHHHHhhCCchhh------------
Q 046030 21 GDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDE-EDRSIFHIAVMHRHAETFKLIYEIGFSKEL------------ 87 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~-~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~------------ 87 (331)
.+.+|.|+||.|+++|+.++|+.|++++++ ++.+|. .|+||||+|+.+|+.+++++|++.|++.+.
T Consensus 21 ~~~~~~t~L~~Av~~g~~~~V~~LL~~Gad-vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNEDVDLVQQLLEGGAN-VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCCC-CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence 334578999999999999999999999999 677765 599999999999999999999999876432
Q ss_pred -----------------hhhhcccCCCcHHHHHHhhCCCCCCCCC-----------------------CCcHHhhHHhhh
Q 046030 88 -----------------IATYVDKSGNNLLHLAAQYSNPKPISKV-----------------------PGAALEMQRELI 127 (331)
Q Consensus 88 -----------------~in~~d~~G~TpLHlAa~~g~~~~~~~l-----------------------~~~~l~~~~~l~ 127 (331)
.+|.+|.+|.||||+|+..|+.++++.+ ...+++.+.+.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence 2466788888999999888887654332 013455555555
Q ss_pred hhhhhhhhc--CcccccccccCCCCchhch
Q 046030 128 TFKEVETIV--KPSFKEMKNNDGKTPWELF 155 (331)
Q Consensus 128 ~~~~v~~l~--~~~~~~~~n~~G~Tpl~la 155 (331)
..+.++.++ .|++++.+|..|.||++.+
T Consensus 180 ~~~~v~~LL~~~gad~n~~d~~g~t~l~~~ 209 (337)
T 4g8k_A 180 HVEVLKILLDEMGADVNACDNMGRNALIHA 209 (337)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCHHHHH
T ss_pred CHHHHHHHHhccCCCcCccCCCCCcHHHHH
Confidence 566666665 2666666777777776655
No 77
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.75 E-value=2.7e-18 Score=152.46 Aligned_cols=132 Identities=14% Similarity=0.095 Sum_probs=110.0
Q ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHH
Q 046030 22 DAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLH 101 (331)
Q Consensus 22 d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLH 101 (331)
+..|.||||+|+..|+.++++.|++.+++ ++..|..|+||||+|+..|+.+++++|++.|.+. +.+|.+|.||||
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~L~ 110 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV----NECDFYGFTAFM 110 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT----TCBCTTCCBHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CccCcccCCHHH
Confidence 67789999999999999999999999988 7889999999999999999999999999999875 458999999999
Q ss_pred HHHhhCCCCCCCCC-----------------------CCcHHhhHHhhhhhhhhhhhc-C-cccccccccCCCCchhchH
Q 046030 102 LAAQYSNPKPISKV-----------------------PGAALEMQRELITFKEVETIV-K-PSFKEMKNNDGKTPWELFT 156 (331)
Q Consensus 102 lAa~~g~~~~~~~l-----------------------~~~~l~~~~~l~~~~~v~~l~-~-~~~~~~~n~~G~Tpl~la~ 156 (331)
+|+..|+.++++.+ ...+++.+...+..+.++.++ . +.+++.+|.+|.||++.|.
T Consensus 111 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~ 190 (285)
T 1wdy_A 111 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 99999998766543 114556666666667777776 2 7788888888888888885
Q ss_pred Hh
Q 046030 157 AE 158 (331)
Q Consensus 157 ~~ 158 (331)
..
T Consensus 191 ~~ 192 (285)
T 1wdy_A 191 LS 192 (285)
T ss_dssp HC
T ss_pred Hc
Confidence 43
No 78
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.75 E-value=3.8e-19 Score=164.95 Aligned_cols=143 Identities=16% Similarity=0.133 Sum_probs=104.9
Q ss_pred EecccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhccc
Q 046030 15 RVSIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDK 94 (331)
Q Consensus 15 ~~~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~ 94 (331)
....+..|.+|.||||+|+..|+.++|+.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|++. .+.
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~ 82 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH------SLW 82 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC------CCB
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc------ccc
Confidence 345677788899999999999999999999999888 7888999999999999999999999999988742 345
Q ss_pred CCCcHHHHHHhhCCCCCCCCCC----------------------------------CcHHhhHHhhh--hhhhhhhhc-C
Q 046030 95 SGNNLLHLAAQYSNPKPISKVP----------------------------------GAALEMQRELI--TFKEVETIV-K 137 (331)
Q Consensus 95 ~G~TpLHlAa~~g~~~~~~~l~----------------------------------~~~l~~~~~l~--~~~~v~~l~-~ 137 (331)
+|.||||+|+..|+.+++++|. ..+++.+...+ ..+.++.++ .
T Consensus 83 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ 162 (364)
T 3ljn_A 83 HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL 162 (364)
T ss_dssp TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence 7888888888888877665441 23455555555 566666666 3
Q ss_pred cccccccccCCCCchhchHH-hhhhHHH
Q 046030 138 PSFKEMKNNDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 138 ~~~~~~~n~~G~Tpl~la~~-~~~~l~~ 164 (331)
+++++.+|.+|.||+|+|.. ++.++++
T Consensus 163 ga~~~~~d~~g~t~L~~A~~~g~~~~v~ 190 (364)
T 3ljn_A 163 GASPTAKDKADETPLMRAMEFRNREALD 190 (364)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCCCcccCCCCCCHHHHHHHcCCHHHHH
Confidence 77777777788888887754 3444443
No 79
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.75 E-value=4.1e-18 Score=147.62 Aligned_cols=135 Identities=17% Similarity=0.199 Sum_probs=68.4
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHH
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAA 104 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa 104 (331)
|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|.+. +.+|.+|.||||+|+
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~----~~~~~~g~t~l~~a~ 150 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV----DMMDQNGMTPLMWAA 150 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHH
T ss_pred CCChhHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc----cccCCCCCcHHHHHH
Confidence 44444444444444444444444444 3444444555555555555555555555544442 335555666666665
Q ss_pred hhCC-CCCCCCC--------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHHh-hhhHHH
Q 046030 105 QYSN-PKPISKV--------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTAE-HKTLLE 164 (331)
Q Consensus 105 ~~g~-~~~~~~l--------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~~-~~~l~~ 164 (331)
..++ .++++++ ...+++.+...+..+.++.++ .|++++.+|.+|+||+++|.+. +.++++
T Consensus 151 ~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~ 227 (240)
T 3eu9_A 151 YRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMIN 227 (240)
T ss_dssp HHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 5444 2222211 113455555555555566555 3666777777777777777443 444443
No 80
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.74 E-value=4.9e-18 Score=150.83 Aligned_cols=145 Identities=21% Similarity=0.191 Sum_probs=112.7
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhh------hhh
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELI------ATY 91 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~------in~ 91 (331)
++..|.+|.||||+|+..|+.++++.|++++++ ++..|..|+||||+|+..|+.+++++|++.|.+.+.. .+.
T Consensus 65 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 143 (285)
T 1wdy_A 65 PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER 143 (285)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHh
Confidence 456778899999999999999999999999998 7889999999999999999999999999998875431 111
Q ss_pred cccCCCcHHHHHHhhCCCCCCCCCC---C-----------cHHhhHHhhhh----hhhhhhhc-CcccccccccCCCCch
Q 046030 92 VDKSGNNLLHLAAQYSNPKPISKVP---G-----------AALEMQRELIT----FKEVETIV-KPSFKEMKNNDGKTPW 152 (331)
Q Consensus 92 ~d~~G~TpLHlAa~~g~~~~~~~l~---~-----------~~l~~~~~l~~----~~~v~~l~-~~~~~~~~n~~G~Tpl 152 (331)
.|.+|.||||+|+..|+.++++.+. + .+++....... .+.++.+. .+.+++.+|.+|+||+
T Consensus 144 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L 223 (285)
T 1wdy_A 144 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPL 223 (285)
T ss_dssp TTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHH
T ss_pred hccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 2788999999999999988765441 1 23444333333 34455555 5888999999999999
Q ss_pred hchHHh-hhhHH
Q 046030 153 ELFTAE-HKTLL 163 (331)
Q Consensus 153 ~la~~~-~~~l~ 163 (331)
|+|.+. +.+++
T Consensus 224 ~~A~~~~~~~~v 235 (285)
T 1wdy_A 224 ILAVEKKHLGLV 235 (285)
T ss_dssp HHHHHTTCHHHH
T ss_pred HHHHHcCCHHHH
Confidence 999653 44443
No 81
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.74 E-value=2.2e-18 Score=160.87 Aligned_cols=147 Identities=18% Similarity=0.206 Sum_probs=85.8
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhC---CCcccccccCCccHHHHHHHcC---CHHHHHHHHhhCCchhh----
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSY---PDLVHELDEEDRSIFHIAVMHR---HAETFKLIYEIGFSKEL---- 87 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~---~~~~~~~d~~G~t~LH~Aa~~g---~~~iv~~Ll~~~~~~~~---- 87 (331)
++..|.+|.||||+|+..|+.++++.|++.+ .+ ++..|..|+||||+|+..+ +.+++++|++.|++.+.
T Consensus 192 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 270 (373)
T 2fo1_E 192 PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD-IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA 270 (373)
T ss_dssp SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT-TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGG
T ss_pred CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC-hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccc
Confidence 4445555666666666666666666666544 23 4555666666666666555 55566666665554322
Q ss_pred hhhhcccCCCcHHHHHHhhCCCCCCCCCC--------------CcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCch
Q 046030 88 IATYVDKSGNNLLHLAAQYSNPKPISKVP--------------GAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPW 152 (331)
Q Consensus 88 ~in~~d~~G~TpLHlAa~~g~~~~~~~l~--------------~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl 152 (331)
..+.+|.+|+||||+|+..|+.+++++|. ..+++.+...+..+.++.++ .|++++.+|.+|+||+
T Consensus 271 ~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l 350 (373)
T 2fo1_E 271 RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTAR 350 (373)
T ss_dssp GTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHH
T ss_pred ccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHH
Confidence 01224555666666666665555443321 13444444444455566665 5889999999999999
Q ss_pred hchHH-hhhhHHHH
Q 046030 153 ELFTA-EHKTLLEE 165 (331)
Q Consensus 153 ~la~~-~~~~l~~~ 165 (331)
|+|.+ ++.++++.
T Consensus 351 ~~A~~~g~~~iv~~ 364 (373)
T 2fo1_E 351 QLAQANNHHNIVDI 364 (373)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHH
Confidence 99955 45565543
No 82
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.73 E-value=2.3e-18 Score=160.69 Aligned_cols=145 Identities=19% Similarity=0.209 Sum_probs=115.4
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++..|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.+... ..++.+|.+|
T Consensus 158 ~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~d~~g 235 (373)
T 2fo1_E 158 DVNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD-PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLK-GDIEELDRNG 235 (373)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH-HTTSCCCTTS
T ss_pred CCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC-CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccc-cChhhcCCCC
Confidence 3577889999999999999999999999999999 7899999999999999999999999999876211 1146699999
Q ss_pred CcHHHHHHhhC---CCCCCCCC---------------------CCcHHhhHHhhhhhhhhhhhcC--cccccccccCCCC
Q 046030 97 NNLLHLAAQYS---NPKPISKV---------------------PGAALEMQRELITFKEVETIVK--PSFKEMKNNDGKT 150 (331)
Q Consensus 97 ~TpLHlAa~~g---~~~~~~~l---------------------~~~~l~~~~~l~~~~~v~~l~~--~~~~~~~n~~G~T 150 (331)
.||||+|+..+ +.+++++| ...+++.+...+..+.++.++. +.+++.+|.+|.|
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~T 315 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKT 315 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCC
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCC
Confidence 99999999987 43333222 1246677777777777887773 4888889999999
Q ss_pred chhchHHh-hhhHH
Q 046030 151 PWELFTAE-HKTLL 163 (331)
Q Consensus 151 pl~la~~~-~~~l~ 163 (331)
|+|+|... +.+++
T Consensus 316 pL~~A~~~g~~~iv 329 (373)
T 2fo1_E 316 PIMLAAQEGRIEVV 329 (373)
T ss_dssp HHHHHHHHTCHHHH
T ss_pred HHHHHHHcCCHHHH
Confidence 99988543 34433
No 83
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.73 E-value=3.7e-18 Score=136.07 Aligned_cols=93 Identities=17% Similarity=0.239 Sum_probs=84.6
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++..|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. +.+|.+|
T Consensus 39 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g 113 (136)
T 2jab_A 39 DVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADV----NAQDKFG 113 (136)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTS
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----cCcCCCC
Confidence 3567788999999999999999999999999998 8899999999999999999999999999999885 4599999
Q ss_pred CcHHHHHHhhCCCCCCCC
Q 046030 97 NNLLHLAAQYSNPKPISK 114 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~ 114 (331)
+||||+|+..|+.+++++
T Consensus 114 ~tpl~~A~~~~~~~~~~~ 131 (136)
T 2jab_A 114 KTAFDISIGNGNEDLAEI 131 (136)
T ss_dssp CCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHH
Confidence 999999999999765543
No 84
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.73 E-value=7.6e-19 Score=153.11 Aligned_cols=141 Identities=9% Similarity=0.034 Sum_probs=107.8
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcc-cC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVD-KS 95 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d-~~ 95 (331)
.++.+|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++.+ .+| .+
T Consensus 46 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~----~~~~~~ 120 (229)
T 2vge_A 46 DPSQPNEEGITALHNAICGANYSIVDFLITAGAN-VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIF----ATTLSD 120 (229)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT----CCCSST
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc----cccCCC
Confidence 3567889999999999999999999999999998 88999999999999999999999999999998854 466 69
Q ss_pred CCcHHHHH--HhhCCCCCCCCCCCc--HHhhHHhhhh--------hhhhhhhc-Cccc--ccccccCCCCchhchHH-hh
Q 046030 96 GNNLLHLA--AQYSNPKPISKVPGA--ALEMQRELIT--------FKEVETIV-KPSF--KEMKNNDGKTPWELFTA-EH 159 (331)
Q Consensus 96 G~TpLHlA--a~~g~~~~~~~l~~~--~l~~~~~l~~--------~~~v~~l~-~~~~--~~~~n~~G~Tpl~la~~-~~ 159 (331)
|+||||+| +..|+.+++++|... .......... ....+.++ .+++ ++.+|.+|+||+|+|.. ++
T Consensus 121 g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 121 GATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQ 200 (229)
T ss_dssp TCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTE
T ss_pred CCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCcccHHHHHHHcCC
Confidence 99999999 899998887766321 1111100000 01112222 3555 67889999999999954 34
Q ss_pred hhH
Q 046030 160 KTL 162 (331)
Q Consensus 160 ~~l 162 (331)
.++
T Consensus 201 ~~~ 203 (229)
T 2vge_A 201 EGY 203 (229)
T ss_dssp EEE
T ss_pred cce
Confidence 333
No 85
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.73 E-value=2.9e-18 Score=153.12 Aligned_cols=135 Identities=18% Similarity=0.128 Sum_probs=87.3
Q ss_pred ccCCCCCCCCHHHHHHhcCcHH-HHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFK-FLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~-~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
++..|..|.||||.|+..++.+ +++.|++.+.+ ++.+|.+|+||||+|+..|+.+++++|++.+++. +.++.+|
T Consensus 45 ~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~----~~~~~~g 119 (269)
T 4b93_B 45 VSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG-VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA----GARNADQ 119 (269)
T ss_dssp ------------------------------CCCC-TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT----TCCCTTC
T ss_pred ccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc----CccCCCC
Confidence 4556778999999999888764 78899999998 8999999999999999999999999999999885 4489999
Q ss_pred CcHHHHHHhhCCCCCCCCC-------------CCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH
Q 046030 97 NNLLHLAAQYSNPKPISKV-------------PGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l-------------~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 157 (331)
.||+|+|+..++.++++.| ...+++.+...+..+.++.++ .|++++.+|.+|.||||+|..
T Consensus 120 ~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~ 194 (269)
T 4b93_B 120 AVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVI 194 (269)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred CCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHH
Confidence 9999999999997765543 124566666666677777666 477888888888888888754
No 86
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=2.4e-18 Score=132.29 Aligned_cols=93 Identities=20% Similarity=0.223 Sum_probs=79.8
Q ss_pred ecccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 16 VSIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 16 ~~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
......|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~----~~~d~~ 89 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV----XAQDKF 89 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTT
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc----cccccC
Confidence 34567788999999999999999999999999988 7889999999999999999999999999999884 559999
Q ss_pred CCcHHHHHHhhCCCCCCC
Q 046030 96 GNNLLHLAAQYSNPKPIS 113 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~ 113 (331)
|+||||+|+..|+.++++
T Consensus 90 g~tpl~~A~~~~~~~~~~ 107 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDLAE 107 (110)
T ss_dssp SCCHHHHHHHHTCHHHHH
T ss_pred CCcHHHHHHHcCCHHHHH
Confidence 999999999999866543
No 87
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.72 E-value=3.1e-18 Score=155.47 Aligned_cols=107 Identities=10% Similarity=0.118 Sum_probs=89.9
Q ss_pred CCCCCCCHHHHHHhc---CcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 21 GDAANSPQPLQNAHS---GNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~~---G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
.|.+|.||||+|+.. |+.++++.|++.+++ ++.+|.+|+||||+|+..|+.+++++|++.|++. |.+|.+|+
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~----~~~d~~G~ 260 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTALHYAALYNQPDCLKLLLKGRALV----GTVNEAGE 260 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC----SCCCTTSC
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CCcCCCCC
Confidence 578899999999997 899999999999998 8899999999999999999999999999999985 45999999
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
||||+|+..|+.+++++| +. ...+.|.||+|+|.+
T Consensus 261 TpL~~A~~~~~~~iv~~L--------------------l~-----~ga~~g~tpLh~A~~ 295 (301)
T 2b0o_E 261 TALDIARKKHHKECEELL--------------------EQ-----AQAGTFAFPLHVDYS 295 (301)
T ss_dssp CHHHHHHHHTCHHHHHHH--------------------HH-----HHHHTTSSCCC----
T ss_pred CHHHHHHHcCCHHHHHHH--------------------HH-----hcCCCCCChhHHHHh
Confidence 999999999997655443 21 122368999999965
No 88
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.72 E-value=4.1e-18 Score=154.65 Aligned_cols=118 Identities=17% Similarity=0.193 Sum_probs=99.6
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCcccc------cccCCccHHHHHHHc---CCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHE------LDEEDRSIFHIAVMH---RHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~------~d~~G~t~LH~Aa~~---g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
+.++||.|+..|+.+.++.|++.+++ ++. .|..|+||||+|+.. ++.+++++|++.|++. |.+|.+
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv----n~~d~~ 225 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL----DAKAAD 225 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT----TCCCTT
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCc-ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC----CCCCCC
Confidence 34679999999999999999999998 555 689999999999997 8999999999999884 559999
Q ss_pred CCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHHHH
Q 046030 96 GNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLEEA 166 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~~~ 166 (331)
|+||||+|+..|+.+++++| +..|++++.+|.+|+||+|+|.. ++.++++..
T Consensus 226 G~TpLh~A~~~g~~~~v~~L-------------------l~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~L 278 (301)
T 2b0o_E 226 GNTALHYAALYNQPDCLKLL-------------------LKGRALVGTVNEAGETALDIARKKHHKECEELL 278 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHH-------------------HHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999996654433 23689999999999999999965 455554433
No 89
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.72 E-value=5.3e-18 Score=147.58 Aligned_cols=137 Identities=13% Similarity=0.174 Sum_probs=109.8
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCC-----cccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhh
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPD-----LVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATY 91 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~-----~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~ 91 (331)
.++.+|..|.||||+|+..|+.++++.|++.+++ ..+..|..|+||||+|+..|+.+++++|++.|++. |.
T Consensus 70 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~ 145 (236)
T 1ikn_D 70 DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADV----NA 145 (236)
T ss_dssp CSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCT----TC
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CC
Confidence 4788888999999999999999999999998754 25677889999999999999999999999999885 44
Q ss_pred ccc-CCCcHHHHHHhhCCCCCCCCCC-------------CcHHhhHHhhhhhhhhhhhc-Cccccc--ccccCCCCchhc
Q 046030 92 VDK-SGNNLLHLAAQYSNPKPISKVP-------------GAALEMQRELITFKEVETIV-KPSFKE--MKNNDGKTPWEL 154 (331)
Q Consensus 92 ~d~-~G~TpLHlAa~~g~~~~~~~l~-------------~~~l~~~~~l~~~~~v~~l~-~~~~~~--~~n~~G~Tpl~l 154 (331)
+|. +|+||||+|+..|+.+++++|. ..+++.+...+..+.++.++ .|++.. ..|.+|+||.+.
T Consensus 146 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~ 225 (236)
T 1ikn_D 146 QEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDT 225 (236)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhh
Confidence 787 8999999999999988776541 24566666666667777776 466554 889999999998
Q ss_pred hHH
Q 046030 155 FTA 157 (331)
Q Consensus 155 a~~ 157 (331)
..+
T Consensus 226 ~~~ 228 (236)
T 1ikn_D 226 ESE 228 (236)
T ss_dssp C--
T ss_pred hcc
Confidence 754
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.71 E-value=3.3e-17 Score=137.36 Aligned_cols=89 Identities=20% Similarity=0.201 Sum_probs=80.5
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccc-cCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELD-EEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
.++.+|.+|.||||+|+..|+.++++.|++.+++ ++.+| ..|+||||+|+..|+.+++++|++.|++. |.+|.+
T Consensus 68 ~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~----~~~d~~ 142 (183)
T 3deo_A 68 DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI----EVEDER 142 (183)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCT----TCCCTT
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC----cCCCCC
Confidence 3567888999999999999999999999999999 67777 89999999999999999999999999885 449999
Q ss_pred CCcHHHHHHhhCCCC
Q 046030 96 GNNLLHLAAQYSNPK 110 (331)
Q Consensus 96 G~TpLHlAa~~g~~~ 110 (331)
|+||||+|+..++.+
T Consensus 143 g~tpl~~A~~~~~~~ 157 (183)
T 3deo_A 143 GLTALELAREILKTT 157 (183)
T ss_dssp SCCHHHHHHHHHHTC
T ss_pred CCCHHHHHHHhccCc
Confidence 999999999977643
No 91
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.71 E-value=7.6e-18 Score=151.12 Aligned_cols=93 Identities=14% Similarity=0.238 Sum_probs=85.5
Q ss_pred ccCCCCCCCCHHHHHHhc---CcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhccc
Q 046030 18 IPDGDAANSPQPLQNAHS---GNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDK 94 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~---G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~ 94 (331)
++.+|..|.||||+|+.. |+.++++.|++++++ ++.+|..|+||||+|+.+|+.+++++|++.|++. |.+|.
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~----~~~d~ 236 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASI----EIANE 236 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCT
T ss_pred ccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CCccC
Confidence 677789999999999999 899999999999999 8999999999999999999999999999999985 55999
Q ss_pred CCCcHHHHHHhhCCCCCCCCC
Q 046030 95 SGNNLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 95 ~G~TpLHlAa~~g~~~~~~~l 115 (331)
+|+||||+|+..|+.+++++|
T Consensus 237 ~g~tpL~~A~~~~~~~~v~~L 257 (278)
T 1dcq_A 237 SGETPLDIAKRLKHEHCEELL 257 (278)
T ss_dssp TSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999997765443
No 92
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.71 E-value=1.5e-17 Score=144.02 Aligned_cols=114 Identities=18% Similarity=0.194 Sum_probs=60.5
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcH
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNL 99 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~Tp 99 (331)
..|.+|.||||.|+..|+.++++.|++.+++.....+..|+||||+|+..|+.+++++|++.|++. +.+|..|.||
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~t~ 112 (240)
T 3eu9_A 37 QPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP----SLIDGEGCSC 112 (240)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTSCCH
T ss_pred CCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC----cccCCCCCCH
Confidence 334444455555555555555555555444432333333455555555555555555555444442 2244445555
Q ss_pred HHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-CcccccccccCCCCchhchHH
Q 046030 100 LHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV-KPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 100 LHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~Tpl~la~~ 157 (331)
||+|+..|+ .+.++.++ .+.+++.+|.+|.||++.|..
T Consensus 113 l~~A~~~~~--------------------~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~ 151 (240)
T 3eu9_A 113 IHLAAQFGH--------------------TSIVAYLIAKGQDVDMMDQNGMTPLMWAAY 151 (240)
T ss_dssp HHHHHHTTC--------------------HHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHcCH--------------------HHHHHHHHhcCCCccccCCCCCcHHHHHHH
Confidence 555555444 44455454 467788888888888888863
No 93
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.71 E-value=4.6e-18 Score=135.54 Aligned_cols=92 Identities=12% Similarity=0.004 Sum_probs=83.6
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccC-CccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEE-DRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~-G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
.++.+|.+|.||||+|+. |+.++++.|++.+++ ++.+|.. |+||||+|+..|+.+++++|++.|++. |.+|.+
T Consensus 37 ~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~----~~~d~~ 110 (136)
T 1d9s_A 37 DPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL----DVCDAW 110 (136)
T ss_dssp CTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC----CCCSSS
T ss_pred CcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CccCCC
Confidence 356778899999999999 999999999999999 8899999 999999999999999999999999885 459999
Q ss_pred CCcHHHHHHhhCCCCCCCC
Q 046030 96 GNNLLHLAAQYSNPKPISK 114 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~ 114 (331)
|+||||+|+..++.+++++
T Consensus 111 g~tpl~~A~~~~~~~~~~~ 129 (136)
T 1d9s_A 111 GRLPVDLAEEQGHRDIARY 129 (136)
T ss_dssp SSCHHHHHHHHTCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHH
Confidence 9999999999999765543
No 94
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.71 E-value=1.9e-17 Score=144.88 Aligned_cols=93 Identities=11% Similarity=0.050 Sum_probs=84.0
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++..|.+|.||||+|+..|+.++++.|++++++ ++.+|..|+||||+|+..|+.+++++|++.|++.+ .+|..|.
T Consensus 63 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~----~~~~~~~ 137 (239)
T 1ycs_B 63 PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF----AMTYSDM 137 (239)
T ss_dssp CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT----CCCSSSC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc----eecCCCC
Confidence 566788999999999999999999999999999 89999999999999999999999999999999854 4887776
Q ss_pred -cHHHHH--HhhCCCCCCCCC
Q 046030 98 -NLLHLA--AQYSNPKPISKV 115 (331)
Q Consensus 98 -TpLHlA--a~~g~~~~~~~l 115 (331)
||||+| +..|+.+++++|
T Consensus 138 ~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 138 QTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp CCHHHHCCSSSTTCCCHHHHH
T ss_pred cchHHHHHHhhhccHHHHHHH
Confidence 999999 778888877665
No 95
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.70 E-value=1.4e-17 Score=149.36 Aligned_cols=117 Identities=16% Similarity=0.154 Sum_probs=99.0
Q ss_pred CCHHHHHHhcCcHHHHHHHHHhCCCcc-----cccccCCccHHHHHHHc---CCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 26 SPQPLQNAHSGNFKFLAVLIRSYPDLV-----HELDEEDRSIFHIAVMH---RHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 26 ~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~-----~~~d~~G~t~LH~Aa~~---g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
.++||.|+..|+.+.++.+++.+++.. +..|..|+||||+|+.. |+.+++++|++.|++. |.+|.+|+
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i----n~~d~~g~ 206 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL----DKQTGKGS 206 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT----TCCCTTCC
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc----cccCCCCC
Confidence 468999999999999999999998843 34488999999999999 8999999999999984 55999999
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLEE 165 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~~ 165 (331)
||||+|+..|+.+++++| +..|++++.+|.+|+||+|+|.+ ++.++++.
T Consensus 207 TpLh~A~~~g~~~~v~~L-------------------l~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 256 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLL-------------------LRGKASIEIANESGETPLDIAKRLKHEHCEEL 256 (278)
T ss_dssp CHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCccCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999997654433 23689999999999999999965 45555443
No 96
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.70 E-value=8.2e-18 Score=156.67 Aligned_cols=118 Identities=10% Similarity=0.142 Sum_probs=101.3
Q ss_pred CCCCHHHHHHhc-CcHHHHHHHHHhCCCcccccc--cCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHH
Q 046030 24 ANSPQPLQNAHS-GNFKFLAVLIRSYPDLVHELD--EEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLL 100 (331)
Q Consensus 24 ~g~t~Lh~Aa~~-G~~~~v~~Ll~~~~~~~~~~d--~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 100 (331)
.+.|+||.|+.. |+.++++.|++.+++ ++..| ..|+||||+|+..|+.+++++|++.|++. |.+|.+|+|||
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv----n~~d~~G~TpL 272 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD-VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV----NQADSAGRGPL 272 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSCCHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC-CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC----CCCCCCCCCHH
Confidence 456799999999 999999999999998 77777 89999999999999999999999999885 55999999999
Q ss_pred HHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHHH
Q 046030 101 HLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLEE 165 (331)
Q Consensus 101 HlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~~ 165 (331)
|+|+..|+.+++++| +..+++++.+|.+|.||+|+|.. ++.++++.
T Consensus 273 h~A~~~g~~~~v~~L-------------------L~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~l 319 (368)
T 3jue_A 273 HHATILGHTGLACLF-------------------LKRGADLGARDSEGRDPLTIAMETANADIVTL 319 (368)
T ss_dssp HHHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCcHHHHHHH-------------------HHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHH
Confidence 999999996654433 23689999999999999999965 45555443
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.70 E-value=7.6e-18 Score=131.78 Aligned_cols=86 Identities=17% Similarity=0.195 Sum_probs=78.6
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++..|..|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. +.+|.+|
T Consensus 32 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~----~~~~~~g 106 (123)
T 3aaa_C 32 DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADK----TVKGPDG 106 (123)
T ss_dssp CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTS
T ss_pred CcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CCcCCCC
Confidence 3567888999999999999999999999999998 8899999999999999999999999999999885 4499999
Q ss_pred CcHHHHHHhhC
Q 046030 97 NNLLHLAAQYS 107 (331)
Q Consensus 97 ~TpLHlAa~~g 107 (331)
+||||+|...+
T Consensus 107 ~t~l~~A~~~~ 117 (123)
T 3aaa_C 107 LTAFEATDNQA 117 (123)
T ss_dssp CCHHHHCCCHH
T ss_pred CCHHHHhCCHH
Confidence 99999995543
No 98
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.70 E-value=3.3e-17 Score=138.04 Aligned_cols=93 Identities=15% Similarity=0.212 Sum_probs=85.1
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++..|.+|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+|+
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~g~ 135 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANV----NDRNLEGE 135 (192)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS----SCCCTTCC
T ss_pred cccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC----CCCCCCCC
Confidence 567788899999999999999999999999998 7899999999999999999999999999999885 55999999
Q ss_pred cHHHHHHhhCCCCCCCCC
Q 046030 98 NLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l 115 (331)
||||+|+..|+.+++++|
T Consensus 136 t~L~~A~~~~~~~~v~~L 153 (192)
T 2rfm_A 136 TPLIVASKYGRSEIVKKL 153 (192)
T ss_dssp CHHHHHHHHTCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHH
Confidence 999999999998877654
No 99
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.69 E-value=1.8e-17 Score=160.57 Aligned_cols=115 Identities=17% Similarity=0.213 Sum_probs=95.5
Q ss_pred CCHHHHHHhcCcHHHHHHHHHhCCCccccc------ccCCccHHHHHHH---cCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 26 SPQPLQNAHSGNFKFLAVLIRSYPDLVHEL------DEEDRSIFHIAVM---HRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 26 ~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~------d~~G~t~LH~Aa~---~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.+.||.|+..|+.+.++.|++.+++ ++.. |..|+||||+|+. .|+.+++++|++.|++. |.+|.+|
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v----n~~d~~g 207 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL----DAKAADG 207 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT----TCCCSSS
T ss_pred HHHHHHHHhccCHHHHHHHHhhccc-ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC----CccCCCC
Confidence 3679999999999999999999988 5555 8899999999976 89999999999999884 5599999
Q ss_pred CcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH-hhhhHHH
Q 046030 97 NNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~-~~~~l~~ 164 (331)
+||||+|+..|+.+++++| +..|++++.+|++|+||+|+|.. ++.++++
T Consensus 208 ~TpLh~A~~~g~~~~v~~L-------------------l~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~ 257 (497)
T 3lvq_E 208 NTALHYAALYNQPDCLKLL-------------------LKGRALVGTVNEAGETALDIARKKHHKECEE 257 (497)
T ss_dssp CCHHHHHTTTTCHHHHHHH-------------------HHTCCCCSCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999996654433 23689999999999999999954 4555543
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.68 E-value=3.2e-17 Score=152.69 Aligned_cols=119 Identities=15% Similarity=0.176 Sum_probs=84.9
Q ss_pred ccCCC--CCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 18 IPDGD--AANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 18 l~~~d--~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
++..| .+|.||||+|+..|+.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|++. |.+|.+
T Consensus 226 vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~----~~~d~~ 300 (368)
T 3jue_A 226 VNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPLHHATILGHTGLACLFLKRGADL----GARDSE 300 (368)
T ss_dssp TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTT
T ss_pred CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCC----CCcCCC
Confidence 44445 7899999999999999999999999999 8899999999999999999999999999999885 459999
Q ss_pred CCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccccccCCCCchhchHH
Q 046030 96 GNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEMKNNDGKTPWELFTA 157 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~~n~~G~Tpl~la~~ 157 (331)
|+||||+|+..++.+++++| .+......+....+..+.|+++++..
T Consensus 301 G~TpL~~A~~~g~~~iv~lL----------------l~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 301 GRDPLTIAMETANADIVTLL----------------RLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp SCCHHHHHHHTTCHHHHHHH----------------HHHHC---------------------
T ss_pred CCCHHHHHHHCCCHHHHHHH----------------HHcCCCcccccccCCCCCCHHHHHHH
Confidence 99999999999997765544 11112334445677889999998854
No 101
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.68 E-value=1.7e-17 Score=132.15 Aligned_cols=94 Identities=18% Similarity=0.164 Sum_probs=84.3
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSG 96 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G 96 (331)
.++.+|.+|.||||+|+..|+.++++.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.|++. +.+|.+|
T Consensus 35 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~----~~~~~~g 109 (137)
T 3c5r_A 35 DPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASR----NAVNIFG 109 (137)
T ss_dssp CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTS
T ss_pred CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC----CCCCCCC
Confidence 3566788999999999999999999999999998 8899999999999999999999999999999885 4599999
Q ss_pred CcHHHHHHhhCCCCCCCCC
Q 046030 97 NNLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 97 ~TpLHlAa~~g~~~~~~~l 115 (331)
+||||+|+..+..++++++
T Consensus 110 ~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 110 LRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp CCGGGGCCCHHHHHHHSCC
T ss_pred CCHHHHHhhccHHHHHhhc
Confidence 9999999988876655443
No 102
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.68 E-value=5.5e-17 Score=126.44 Aligned_cols=92 Identities=26% Similarity=0.381 Sum_probs=83.8
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++..|..|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|.+. +.+|.+|+
T Consensus 28 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~g~ 102 (126)
T 1n0r_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV----NAKDKNGR 102 (126)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTTSC
T ss_pred CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC----cccCCCCC
Confidence 566788999999999999999999999999998 7899999999999999999999999999999885 44899999
Q ss_pred cHHHHHHhhCCCCCCCC
Q 046030 98 NLLHLAAQYSNPKPISK 114 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~ 114 (331)
||||+|+..|+.+++++
T Consensus 103 t~l~~A~~~~~~~~~~~ 119 (126)
T 1n0r_A 103 TPLHLAARNGHLEVVKL 119 (126)
T ss_dssp CHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHcCcHHHHHH
Confidence 99999999998665543
No 103
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.67 E-value=7.4e-17 Score=147.91 Aligned_cols=121 Identities=18% Similarity=0.226 Sum_probs=98.6
Q ss_pred cCCCCCCCCHHHHHHhcCcHHHHHHHHHh-CCCcccccccCCccHHHHHHHcCC----HHHHHHHHhhCCchhhhhhhcc
Q 046030 19 PDGDAANSPQPLQNAHSGNFKFLAVLIRS-YPDLVHELDEEDRSIFHIAVMHRH----AETFKLIYEIGFSKELIATYVD 93 (331)
Q Consensus 19 ~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~-~~~~~~~~d~~G~t~LH~Aa~~g~----~~iv~~Ll~~~~~~~~~in~~d 93 (331)
...+..|.||||+|+..|+.++|+.|+++ +.+ ++.+|..|+|++|.++..++ .+++++|++.|++. |.+|
T Consensus 162 ~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad-~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~----n~~d 236 (337)
T 4g8k_A 162 ERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV----NVRG 236 (337)
T ss_dssp --CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC-TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT----TCCC
T ss_pred ccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC-cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC----CCcC
Confidence 34567799999999999999999999976 566 88999999999999887654 36889999999985 5599
Q ss_pred cCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc--CcccccccccCCCCchhchHH-hhhhHHH
Q 046030 94 KSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV--KPSFKEMKNNDGKTPWELFTA-EHKTLLE 164 (331)
Q Consensus 94 ~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~--~~~~~~~~n~~G~Tpl~la~~-~~~~l~~ 164 (331)
.+|+||||+|+..|+.+++ +.++ .+.+++.+|.+|+||||+|.+ ++.++++
T Consensus 237 ~~g~t~L~~a~~~~~~~~v--------------------~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~ 290 (337)
T 4g8k_A 237 ERGKTPLILAVEKKHLGLV--------------------QRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 290 (337)
T ss_dssp GGGCCHHHHHHHTTCHHHH--------------------HHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred CCCCCHHHHHHHhhhhHHH--------------------HHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999986543 3333 478899999999999999965 3444443
No 104
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.66 E-value=2.7e-17 Score=141.93 Aligned_cols=94 Identities=14% Similarity=0.188 Sum_probs=83.5
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHh-CCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRS-YPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~-~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
.++.+|.+|.||||+|+..|+.++++.|++. +.+ ++.+|..|+||||+|+..|+.+++++|++.|++.+ .+|.+
T Consensus 98 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~----~~~~~ 172 (222)
T 3ehr_A 98 GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTD----LRNIE 172 (222)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSC----CCCTT
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc----cccCC
Confidence 3567788999999999999999999999998 666 88999999999999999999999999999999854 49999
Q ss_pred CCcHHHHHHhhCCCCCCCCC
Q 046030 96 GNNLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~l 115 (331)
|+||||+|+..++.++++.+
T Consensus 173 g~t~l~~A~~~~~~~~l~~l 192 (222)
T 3ehr_A 173 KKLAFDMATNAACASLLKKK 192 (222)
T ss_dssp SCCHHHHCCSHHHHHHHC--
T ss_pred CCCHHHHhcchhHHHHHHHH
Confidence 99999999998886665443
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.66 E-value=6.4e-17 Score=156.69 Aligned_cols=90 Identities=11% Similarity=0.158 Sum_probs=82.1
Q ss_pred CCCCCCCHHHHHHh---cCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 21 GDAANSPQPLQNAH---SGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 21 ~d~~g~t~Lh~Aa~---~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
.|.+|.||||+|+. .|+.++++.|++.+++ ++.+|.+|+||||+|+.+|+.+++++|++.|++. |.+|.+|+
T Consensus 167 ~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~----~~~d~~g~ 241 (497)
T 3lvq_E 167 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAADGNTALHYAALYNQPDCLKLLLKGRALV----GTVNEAGE 241 (497)
T ss_dssp SCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCC----SCCCTTCC
T ss_pred cccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC----CCcCCCCC
Confidence 37789999999965 9999999999999999 8999999999999999999999999999999985 55999999
Q ss_pred cHHHHHHhhCCCCCCCCC
Q 046030 98 NLLHLAAQYSNPKPISKV 115 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l 115 (331)
||||+|+..|+.+++++|
T Consensus 242 tpl~~A~~~~~~~~~~~L 259 (497)
T 3lvq_E 242 TALDIARKKHHKECEELL 259 (497)
T ss_dssp CHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHH
Confidence 999999999997765443
No 106
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.65 E-value=4.4e-16 Score=136.74 Aligned_cols=110 Identities=20% Similarity=0.234 Sum_probs=88.9
Q ss_pred cccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccc-cCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccC
Q 046030 17 SIPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELD-EEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKS 95 (331)
Q Consensus 17 ~l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~ 95 (331)
.++.+|.+|.||||+|+..|+.++++.|++++++ ++.+| ..|+||||+|+.+|+.+++++|++.|++. |.+|.+
T Consensus 69 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~----~~~d~~ 143 (244)
T 3ui2_A 69 DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI----EVEDER 143 (244)
T ss_dssp CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCCTT
T ss_pred CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC----CCCCCC
Confidence 3567888999999999999999999999999999 67777 88999999999999999999999999885 459999
Q ss_pred CCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhh
Q 046030 96 GNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETI 135 (331)
Q Consensus 96 G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l 135 (331)
|+||||+|+..++.... ..+++.....+..+.++.+
T Consensus 144 g~t~l~~A~~~~~~~~~----~~~l~~a~~~g~~~iv~~L 179 (244)
T 3ui2_A 144 GLTALELAREILKTTPK----GNPMQFGRRIGLEKVINVL 179 (244)
T ss_dssp CCCHHHHHHHHHTTCCC----SSHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhccCC----CCHHHHHHHcChHHHHHHH
Confidence 99999999987664432 2334444444444444433
No 107
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.65 E-value=7.9e-17 Score=135.85 Aligned_cols=112 Identities=11% Similarity=-0.008 Sum_probs=93.5
Q ss_pred CCCHHHHHHhcCcHHHHHHHHHhCCCcccccc-cCCccHHHHHHHcCCH----HHHHHHHhhCCchhhhhhhcccCCCcH
Q 046030 25 NSPQPLQNAHSGNFKFLAVLIRSYPDLVHELD-EEDRSIFHIAVMHRHA----ETFKLIYEIGFSKELIATYVDKSGNNL 99 (331)
Q Consensus 25 g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~t~LH~Aa~~g~~----~iv~~Ll~~~~~~~~~in~~d~~G~Tp 99 (331)
+.++||.|++.|+.+.++.+++.+++ ..| ..|+||||+|+.+++. +++++|++.|++. |.+|.+|+||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~---~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv----n~~d~~g~Tp 78 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE---DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI----KSRTKEGTTL 78 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS---CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS----SCCCTTCCCT
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc---cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC----CCCCCCCCcH
Confidence 46899999999999999999998765 344 7899999999999975 5999999999985 5599999999
Q ss_pred HHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhc-CcccccccccCCC-CchhchHH
Q 046030 100 LHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIV-KPSFKEMKNNDGK-TPWELFTA 157 (331)
Q Consensus 100 LHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~-~~~~~~~~n~~G~-Tpl~la~~ 157 (331)
||+|+..++.++. ...+.++.++ .|++++.+|++|. ||+|+|..
T Consensus 79 Lh~a~~~~~~~~~--------------~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~ 124 (186)
T 3t8k_A 79 FFPLFQGGGNDIT--------------GTTELCKIFLEKGADITALYKPYKIVVFKNIFN 124 (186)
T ss_dssp HHHHHHHCTTCHH--------------HHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGG
T ss_pred HHHHHHcCCcchh--------------hHHHHHHHHHHCCCCCCccCCCcCchHHHHHHH
Confidence 9999999975531 1123355555 6999999999999 99999976
No 108
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.65 E-value=1.3e-16 Score=142.66 Aligned_cols=91 Identities=18% Similarity=0.241 Sum_probs=69.5
Q ss_pred cCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHh-hCCchhhhhhhcccCCC
Q 046030 19 PDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYE-IGFSKELIATYVDKSGN 97 (331)
Q Consensus 19 ~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~-~~~~~~~~in~~d~~G~ 97 (331)
+..|..|.||||+|+..|+.++++.|++.+++ ++.+|.+|+||||+|+..|+.+++++|++ .|++. |.+|.+|+
T Consensus 177 ~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~----~~~d~~g~ 251 (276)
T 4hbd_A 177 AKASQAGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI----SLTDRDGS 251 (276)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT----TCCCTTSC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC----cCcCCCCC
Confidence 34556678888888888888888888888777 67778888888888888888888888887 67664 44788888
Q ss_pred cHHHHHHhhCCCCCCCC
Q 046030 98 NLLHLAAQYSNPKPISK 114 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~ 114 (331)
||||+|+..|+.+++++
T Consensus 252 TpL~~A~~~g~~~iv~~ 268 (276)
T 4hbd_A 252 TALMVALDAGQSEIASM 268 (276)
T ss_dssp CHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHH
Confidence 88888888887665443
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.60 E-value=3.4e-16 Score=116.22 Aligned_cols=84 Identities=27% Similarity=0.416 Sum_probs=68.8
Q ss_pred CCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcC
Q 046030 58 EDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVK 137 (331)
Q Consensus 58 ~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~ 137 (331)
+|+||||+|+.+|+.+++++|++.|++. |.+|.+|+||||+|+..|+.+++++| +..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----n~~d~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ 57 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV----NAKDKNGRTPLHLAARNGHLEVVKLL-------------------LEA 57 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC----cccCCCCCCHHHHHHHcCCHHHHHHH-------------------HHc
Confidence 5899999999999999999999999884 55999999999999999996654332 236
Q ss_pred cccccccccCCCCchhchHHh-hhhHHH
Q 046030 138 PSFKEMKNNDGKTPWELFTAE-HKTLLE 164 (331)
Q Consensus 138 ~~~~~~~n~~G~Tpl~la~~~-~~~l~~ 164 (331)
+++++.+|.+|+||+|+|... +.++++
T Consensus 58 ga~~~~~d~~g~t~l~~A~~~~~~~~~~ 85 (93)
T 1n0q_A 58 GADVNAKDKNGRTPLHLAARNGHLEVVK 85 (93)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCCCCccCCCCCCHHHHHHHcCCHHHHH
Confidence 889999999999999999653 444443
No 110
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.59 E-value=6.9e-16 Score=141.38 Aligned_cols=77 Identities=18% Similarity=0.129 Sum_probs=66.9
Q ss_pred CHHHHHHhcCcHHHHHHHHHhCCCcccc-cccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHh
Q 046030 27 PQPLQNAHSGNFKFLAVLIRSYPDLVHE-LDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQ 105 (331)
Q Consensus 27 t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~-~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~ 105 (331)
+..|.|+..+..++++.|++.+.+ ++. +|.+|+||||+|+..|+.+++++|++.|++. |.+|.+|+||||+|+.
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~d-vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~----n~~d~~g~TpLh~A~~ 173 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLN-LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR----LYGDNMGESCLVKAVK 173 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCC-SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----TBCCTTCCCHHHHHHH
T ss_pred chhHHHHHhhHHHHHHHHHhcCCC-cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC----CCcCCCCCCHHHHHHH
Confidence 345888888888999999999888 777 8999999999999999999999999999885 5599999999999999
Q ss_pred hCC
Q 046030 106 YSN 108 (331)
Q Consensus 106 ~g~ 108 (331)
.|+
T Consensus 174 ~g~ 176 (327)
T 1sw6_A 174 SVN 176 (327)
T ss_dssp SSH
T ss_pred hcc
Confidence 988
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.59 E-value=4.6e-17 Score=152.05 Aligned_cols=125 Identities=12% Similarity=0.128 Sum_probs=90.6
Q ss_pred CCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCc--ccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 20 DGDAANSPQPLQNAHSGNFKFLAVLIRSYPDL--VHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 20 ~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~--~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
.++.++.||||.||..|+.++|+.|++.++.. .+..|.+|+||||+|+.+|+.+++++|++.|++... .+..+.+ .
T Consensus 87 ~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~-~~i~~~~-~ 164 (376)
T 2aja_A 87 KKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM-AMIQAEN-Y 164 (376)
T ss_dssp HHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH-HHHSHHH-H
T ss_pred HcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-cccCCCC-C
Confidence 34556779999999999999999999987621 234567789999999999999999999999975322 1223333 9
Q ss_pred cHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhhhhhhhhcCcccccc--cccCCCCchhchH-H-hhhhHHHH
Q 046030 98 NLLHLAAQYSNPKPISKVPGAALEMQRELITFKEVETIVKPSFKEM--KNNDGKTPWELFT-A-EHKTLLEE 165 (331)
Q Consensus 98 TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~~~v~~l~~~~~~~~--~n~~G~Tpl~la~-~-~~~~l~~~ 165 (331)
||||+|+..|+.+++++| +..+++++. +|.+|.||+|+|. . +|.++++.
T Consensus 165 TpLh~Aa~~G~~eiv~~L-------------------l~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~ 217 (376)
T 2aja_A 165 HAFRLAAENGHLHVLNRL-------------------CELAPTEATAMIQAENYYAFRWAAVGRGHHNVINF 217 (376)
T ss_dssp HHHHHHHHTTCHHHHHHH-------------------HHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHH-------------------HHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHH
Confidence 999999999997765443 224666666 7888888888887 4 45565543
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.50 E-value=5e-15 Score=113.56 Aligned_cols=91 Identities=15% Similarity=0.187 Sum_probs=70.7
Q ss_pred CcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHHHHHHhhCCCCCCCCCCCcHHhhHHhhhhh
Q 046030 50 DLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLLHLAAQYSNPKPISKVPGAALEMQRELITF 129 (331)
Q Consensus 50 ~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpLHlAa~~g~~~~~~~l~~~~l~~~~~l~~~ 129 (331)
......|.+|+||||+|+..|+.+++++|++.|++. |.+|.+|+||||+|+..|+.+++++|
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i----~~~d~~g~tpLh~A~~~~~~~~v~~L-------------- 76 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV----AAKDKNGSTPLHLAARNGHLEVVKLL-------------- 76 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT----TCCCTTCCCHHHHHHHTTCHHHHHHH--------------
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC----CccCCCCCCHHHHHHHcCCHHHHHHH--------------
Confidence 335677899999999999999999999999999874 55999999999999999986654332
Q ss_pred hhhhhhcCcccccccccCCCCchhchHHh-hhhHH
Q 046030 130 KEVETIVKPSFKEMKNNDGKTPWELFTAE-HKTLL 163 (331)
Q Consensus 130 ~~v~~l~~~~~~~~~n~~G~Tpl~la~~~-~~~l~ 163 (331)
+..+++++.+|.+|.||+|+|... +.+++
T Consensus 77 -----l~~ga~~~~~d~~g~tpl~~A~~~~~~~~~ 106 (110)
T 2zgd_A 77 -----LEAGADVXAQDKFGKTAFDISIDNGNEDLA 106 (110)
T ss_dssp -----HHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred -----HHcCCCccccccCCCcHHHHHHHcCCHHHH
Confidence 235889999999999999999654 44443
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.49 E-value=9.1e-16 Score=143.27 Aligned_cols=90 Identities=17% Similarity=0.160 Sum_probs=74.1
Q ss_pred CCCCCHHHHHHhcCcHHHHHHHHHhCCCc--ccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCCcHH
Q 046030 23 AANSPQPLQNAHSGNFKFLAVLIRSYPDL--VHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGNNLL 100 (331)
Q Consensus 23 ~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~--~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~TpL 100 (331)
.+|.||||+||..|+.++|+.|++++++. .+..+.+ +||||+|+.+|+.+++++|++.|++.+. +.+|.+|+|||
T Consensus 126 ~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~--~~~d~~g~TpL 202 (376)
T 2aja_A 126 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEAT--AMIQAENYYAF 202 (376)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHH--HHHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccch--hccCCCCCCHH
Confidence 45788999999999999999999999752 1222333 9999999999999999999999987432 22788899999
Q ss_pred HHHH-hhCCCCCCCCC
Q 046030 101 HLAA-QYSNPKPISKV 115 (331)
Q Consensus 101 HlAa-~~g~~~~~~~l 115 (331)
|+|+ ..|+.+++++|
T Consensus 203 ~~Aa~~~G~~eiv~~L 218 (376)
T 2aja_A 203 RWAAVGRGHHNVINFL 218 (376)
T ss_dssp HHHHSTTCCHHHHHHH
T ss_pred HHHHHHCCCHHHHHHH
Confidence 9999 99997765544
No 114
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.44 E-value=1.1e-13 Score=106.41 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=70.0
Q ss_pred ccCCCCCCCCHHHHHHhcCcHHHHHHHHHhCCCcccccccCCccHHHHHHHcCCHHHHHHHHhhCCchhhhhhhcccCCC
Q 046030 18 IPDGDAANSPQPLQNAHSGNFKFLAVLIRSYPDLVHELDEEDRSIFHIAVMHRHAETFKLIYEIGFSKELIATYVDKSGN 97 (331)
Q Consensus 18 l~~~d~~g~t~Lh~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~t~LH~Aa~~g~~~iv~~Ll~~~~~~~~~in~~d~~G~ 97 (331)
++.+|..|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.|++. |.++.+|.
T Consensus 35 ~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~----n~~~~~~~ 109 (115)
T 2l6b_A 35 VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV----NARSWGSS 109 (115)
T ss_dssp SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH----HHHSCCCC
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC----CcCCcccc
Confidence 567788999999999999999999999999998 8899999999999999999999999999999985 55899999
Q ss_pred cHH
Q 046030 98 NLL 100 (331)
Q Consensus 98 TpL 100 (331)
||-
T Consensus 110 ~~~ 112 (115)
T 2l6b_A 110 HHH 112 (115)
T ss_dssp ---
T ss_pred ccc
Confidence 873
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=41.70 E-value=19 Score=20.90 Aligned_cols=19 Identities=21% Similarity=0.090 Sum_probs=15.4
Q ss_pred HHHHHHhcCcHHHHHHHHH
Q 046030 28 QPLQNAHSGNFKFLAVLIR 46 (331)
Q Consensus 28 ~Lh~Aa~~G~~~~v~~Ll~ 46 (331)
-+..||+.|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 4678999999999987743
No 116
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=31.19 E-value=51 Score=29.16 Aligned_cols=21 Identities=0% Similarity=0.040 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHhHHh
Q 046030 262 LSLFIALTAMMLSFSSNFFLA 282 (331)
Q Consensus 262 ~~~~~s~~~~~~af~~~~~~v 282 (331)
.+..+|+..+..+|++|+|=+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 467788899999999999975
No 117
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=27.30 E-value=38 Score=30.36 Aligned_cols=21 Identities=24% Similarity=0.267 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHh
Q 046030 262 LSLFIALTAMMLSFSSNFFLA 282 (331)
Q Consensus 262 ~~~~~s~~~~~~af~~~~~~v 282 (331)
.+..+|+..+..+|++|+|=+
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 467789999999999999864
Done!