BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 046032
         (464 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A1CVK0|PDSA_NEOFI Protostadienol synthase A OS=Neosartorya fischeri (strain ATCC 1020
           / DSM 3700 / FGSC A1164 / NRRL 181) GN=pdsA PE=3 SV=1
          Length = 738

 Score = 34.7 bits (78), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 389 LDQAKRMVDRLQSLDYLKDKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFV 448
           +D  + M + L+S D  + +   I+ K W+ L        RATR  +E V NG E F  +
Sbjct: 37  VDNGRHMWEYLESEDEARKRPQSILEKYWLGLPYELPARPRATRA-LEAVENGWEFFKRL 95

Query: 449 WVLMAHFG 456
                H+G
Sbjct: 96  QTADGHWG 103


>sp|P34358|CED7_CAEEL ABC transporter ced-7 OS=Caenorhabditis elegans GN=ced-7 PE=1 SV=6
          Length = 1704

 Score = 33.1 bits (74), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 22   ILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATFAIGLIAERAINSQTPTK 81
            IL+SL+    L +         +  I++L W  YF +     +A+  +       Q+P+K
Sbjct: 1177 ILYSLICLIFLFMFLAFHWMYDHLAIVILFWFLYFFSSVPFIYAVSFLF------QSPSK 1230

Query: 82   SNELLVLW 89
            +N LL++W
Sbjct: 1231 ANVLLIIW 1238


>sp|Q0IHI3|CB062_XENLA Uncharacterized protein C2orf62 homolog OS=Xenopus laevis PE=2 SV=1
          Length = 376

 Score = 32.3 bits (72), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 8/57 (14%)

Query: 296 FGKSIIFWH----IATEFLYEKTAKEAISDEETYNAR--EFSKILSDYMLYLLVLKP 346
           F K  + W     + +EFL  K  +E ISD ETY  R  E   +L+D+M +LL+ KP
Sbjct: 284 FEKKPLAWQEDLQLHSEFLDRK--EELISDHETYLRRHPEVKVLLADFMQFLLLRKP 338


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.322    0.137    0.407 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,514,198
Number of Sequences: 539616
Number of extensions: 6771508
Number of successful extensions: 15773
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 15770
Number of HSP's gapped (non-prelim): 13
length of query: 464
length of database: 191,569,459
effective HSP length: 121
effective length of query: 343
effective length of database: 126,275,923
effective search space: 43312641589
effective search space used: 43312641589
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)