Query 046033
Match_columns 434
No_of_seqs 124 out of 1479
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 13:58:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046033.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046033hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.9E-56 9.8E-61 431.9 38.1 403 1-426 24-452 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 1.3E-53 4.5E-58 420.2 43.0 406 1-429 17-470 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.7E-52 1.3E-56 411.3 35.5 408 1-427 19-478 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.7E-50 9.2E-55 394.1 38.5 405 1-427 18-451 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 4.2E-50 1.4E-54 393.8 35.2 402 1-426 20-461 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 4.4E-43 1.5E-47 342.3 32.4 375 1-428 23-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 7.2E-43 2.5E-47 338.1 25.3 354 1-426 33-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 5.1E-41 1.7E-45 326.6 26.3 369 1-428 11-400 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.2E-40 4.2E-45 324.1 23.3 369 1-428 11-401 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 2.1E-39 7E-44 315.5 31.0 372 1-428 31-413 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 1.8E-39 6E-44 314.4 27.6 369 2-429 12-383 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 1.1E-38 3.7E-43 308.9 32.0 375 1-429 15-399 (402)
13 2p6p_A Glycosyl transferase; X 100.0 1.7E-36 5.7E-41 291.9 30.1 354 1-432 11-383 (384)
14 2iyf_A OLED, oleandomycin glyc 100.0 1.3E-36 4.3E-41 297.2 28.9 373 1-427 18-398 (430)
15 2yjn_A ERYCIII, glycosyltransf 100.0 4.2E-36 1.4E-40 294.3 30.3 366 2-429 32-436 (441)
16 4fzr_A SSFS6; structural genom 100.0 1.8E-35 6.2E-40 286.0 18.1 350 2-425 27-397 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 3.1E-34 1.1E-38 277.3 26.2 346 2-427 32-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5.5E-34 1.9E-38 274.9 23.4 353 2-428 13-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 5.7E-31 1.9E-35 255.6 33.4 354 2-428 32-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.1E-31 3.9E-36 255.5 24.8 326 2-428 14-356 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 6.6E-27 2.2E-31 198.2 18.4 164 226-413 6-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 1.3E-18 4.4E-23 165.5 26.6 326 2-428 18-355 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 2.7E-15 9.3E-20 135.6 18.7 254 1-372 15-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 8.8E-16 3E-20 133.1 10.7 142 238-391 25-196 (224)
25 3c48_A Predicted glycosyltrans 99.4 4.9E-10 1.7E-14 108.9 32.3 359 2-429 43-428 (438)
26 2jjm_A Glycosyl transferase, g 99.4 1.9E-10 6.5E-15 110.2 27.6 305 4-394 30-350 (394)
27 3ot5_A UDP-N-acetylglucosamine 99.4 2.9E-11 9.9E-16 116.0 20.2 276 84-428 101-393 (403)
28 3dzc_A UDP-N-acetylglucosamine 99.4 1E-11 3.5E-16 119.0 16.7 276 83-426 97-394 (396)
29 1v4v_A UDP-N-acetylglucosamine 99.4 1.9E-11 6.6E-16 116.4 17.9 85 303-404 254-341 (376)
30 3okp_A GDP-mannose-dependent a 99.3 1.1E-09 3.9E-14 104.5 29.2 300 2-394 20-344 (394)
31 1vgv_A UDP-N-acetylglucosamine 99.3 1.2E-10 4.2E-15 111.0 21.6 306 4-393 13-341 (384)
32 3fro_A GLGA glycogen synthase; 99.3 4.8E-09 1.6E-13 101.6 28.9 348 5-409 22-412 (439)
33 2gek_A Phosphatidylinositol ma 99.3 3.3E-09 1.1E-13 101.7 27.4 298 3-394 37-349 (406)
34 4hwg_A UDP-N-acetylglucosamine 99.3 1.8E-10 6.3E-15 109.5 17.5 300 6-394 24-342 (385)
35 2r60_A Glycosyl transferase, g 99.2 4E-09 1.4E-13 104.3 27.2 370 4-428 36-461 (499)
36 3beo_A UDP-N-acetylglucosamine 99.1 3.1E-09 1.1E-13 100.8 18.6 82 304-402 263-347 (375)
37 2iw1_A Lipopolysaccharide core 99.0 4.2E-09 1.4E-13 99.8 16.5 112 303-425 252-370 (374)
38 2x6q_A Trehalose-synthase TRET 99.0 2.5E-07 8.4E-12 89.1 26.8 79 302-394 291-379 (416)
39 2iuy_A Avigt4, glycosyltransfe 99.0 1.6E-08 5.5E-13 94.7 16.1 152 244-427 164-336 (342)
40 1rzu_A Glycogen synthase 1; gl 98.9 7.9E-07 2.7E-11 87.3 26.8 129 243-392 292-438 (485)
41 2qzs_A Glycogen synthase; glyc 98.8 2.3E-06 8E-11 84.0 27.9 130 242-392 292-439 (485)
42 2xci_A KDO-transferase, 3-deox 98.7 2.1E-06 7.1E-11 81.4 22.3 95 305-410 261-362 (374)
43 3s28_A Sucrose synthase 1; gly 98.6 1.7E-05 5.8E-10 81.9 25.1 81 302-392 638-728 (816)
44 3oy2_A Glycosyltransferase B73 98.5 8.7E-06 3E-10 78.0 21.0 76 306-394 256-355 (413)
45 2vsy_A XCC0866; transferase, g 98.4 0.00019 6.6E-09 71.7 28.9 82 304-394 434-522 (568)
46 3rhz_A GTF3, nucleotide sugar 98.4 4.9E-05 1.7E-09 70.5 21.3 109 305-426 215-337 (339)
47 2f9f_A First mannosyl transfer 98.2 8.8E-06 3E-10 68.2 11.1 142 243-409 24-175 (177)
48 2hy7_A Glucuronosyltransferase 98.2 0.00045 1.5E-08 65.9 23.2 75 302-394 263-352 (406)
49 2x0d_A WSAF; GT4 family, trans 97.9 0.00096 3.3E-08 63.8 20.2 85 303-403 294-385 (413)
50 3qhp_A Type 1 capsular polysac 97.8 8.3E-05 2.8E-09 61.2 9.1 143 242-408 2-155 (166)
51 4gyw_A UDP-N-acetylglucosamine 97.7 0.00058 2E-08 70.1 15.6 159 240-413 521-685 (723)
52 2bfw_A GLGA glycogen synthase; 97.6 0.0011 3.7E-08 56.1 13.0 92 305-409 96-197 (200)
53 3q3e_A HMW1C-like glycosyltran 97.5 0.0024 8.3E-08 63.1 15.2 142 242-394 441-588 (631)
54 3vue_A GBSS-I, granule-bound s 97.3 0.16 5.4E-06 50.1 29.0 169 243-428 328-509 (536)
55 3tov_A Glycosyl transferase fa 97.2 0.0084 2.9E-07 55.8 15.6 92 2-123 20-115 (349)
56 1psw_A ADP-heptose LPS heptosy 96.6 0.26 8.8E-06 45.4 20.0 92 2-123 12-106 (348)
57 3t5t_A Putative glycosyltransf 95.2 2.5 8.4E-05 40.9 25.0 109 305-428 353-472 (496)
58 2gt1_A Lipopolysaccharide hept 94.9 0.91 3.1E-05 41.2 15.7 135 240-393 177-321 (326)
59 1uqt_A Alpha, alpha-trehalose- 92.2 2 6.8E-05 41.5 13.3 108 306-429 333-454 (482)
60 2wqk_A 5'-nucleotidase SURE; S 88.3 1.7 5.9E-05 37.8 8.1 99 7-127 17-128 (251)
61 2iz6_A Molybdenum cofactor car 87.4 7.8 0.00027 31.5 11.1 132 229-393 35-173 (176)
62 3nb0_A Glycogen [starch] synth 86.0 6.6 0.00022 39.4 11.7 34 316-351 514-551 (725)
63 2q5c_A NTRC family transcripti 79.5 8.3 0.00028 32.0 8.3 112 2-129 36-171 (196)
64 2phj_A 5'-nucleotidase SURE; S 77.5 6.3 0.00022 34.1 7.1 99 7-127 17-128 (251)
65 3pdi_B Nitrogenase MOFE cofact 77.2 6.2 0.00021 37.7 7.8 35 88-125 366-400 (458)
66 2yvq_A Carbamoyl-phosphate syn 71.5 6.2 0.00021 30.9 5.2 87 6-125 38-132 (143)
67 1rcu_A Conserved hypothetical 70.0 45 0.0015 27.5 10.3 97 228-350 47-150 (195)
68 3lyu_A Putative hydrogenase; t 68.3 39 0.0013 26.0 9.6 26 4-30 30-55 (142)
69 1mio_B Nitrogenase molybdenum 66.6 15 0.00051 35.1 7.7 35 88-125 376-410 (458)
70 1yt5_A Inorganic polyphosphate 65.4 5.6 0.00019 34.7 4.2 53 322-394 41-96 (258)
71 2i2c_A Probable inorganic poly 64.4 6.5 0.00022 34.6 4.4 53 322-394 35-93 (272)
72 1kjn_A MTH0777; hypotethical p 59.9 5.5 0.00019 31.0 2.6 29 7-35 25-53 (157)
73 1qgu_B Protein (nitrogenase mo 58.7 26 0.0009 34.0 7.9 34 88-124 425-465 (519)
74 1ydh_A AT5G11950; structural g 58.1 60 0.002 27.2 9.0 86 305-391 88-187 (216)
75 2vqe_B 30S ribosomal protein S 57.0 95 0.0033 26.7 11.3 32 97-128 158-191 (256)
76 3dfz_A SIRC, precorrin-2 dehyd 55.9 84 0.0029 26.5 9.7 155 234-413 26-185 (223)
77 3l7i_A Teichoic acid biosynthe 54.7 14 0.00046 37.7 5.4 110 308-428 603-716 (729)
78 2lnd_A De novo designed protei 53.2 19 0.00065 24.4 4.1 50 339-393 48-100 (112)
79 3bbn_B Ribosomal protein S2; s 52.8 86 0.0029 26.6 9.1 31 97-127 157-189 (231)
80 2gk4_A Conserved hypothetical 52.5 17 0.00057 31.1 4.7 22 8-29 33-54 (232)
81 3qjg_A Epidermin biosynthesis 52.0 92 0.0031 25.1 9.0 114 241-368 6-143 (175)
82 1u0t_A Inorganic polyphosphate 51.3 11 0.00038 33.8 3.6 52 323-394 76-131 (307)
83 1g5t_A COB(I)alamin adenosyltr 51.3 1E+02 0.0035 25.3 10.0 82 4-106 42-129 (196)
84 3lqk_A Dipicolinate synthase s 50.2 92 0.0032 25.7 8.8 56 339-394 120-186 (201)
85 1o97_C Electron transferring f 50.0 25 0.00085 30.7 5.6 40 88-127 103-148 (264)
86 3u7q_A Nitrogenase molybdenum- 49.9 17 0.00057 35.1 4.8 36 87-125 407-442 (492)
87 2lpm_A Two-component response 49.1 19 0.00064 27.2 4.1 39 88-126 44-87 (123)
88 3s2u_A UDP-N-acetylglucosamine 48.9 35 0.0012 31.2 6.8 27 322-348 92-121 (365)
89 3to5_A CHEY homolog; alpha(5)b 48.1 31 0.0011 26.4 5.3 40 90-129 50-98 (134)
90 1qv9_A F420-dependent methylen 46.9 51 0.0018 27.9 6.5 44 86-129 53-102 (283)
91 3uhj_A Probable glycerol dehyd 46.4 48 0.0016 30.7 7.2 95 9-128 43-140 (387)
92 3aek_B Light-independent proto 46.2 19 0.00066 35.0 4.7 35 88-125 340-374 (525)
93 3qua_A Putative uncharacterize 46.1 90 0.0031 25.7 8.1 43 306-349 101-154 (199)
94 3pdi_A Nitrogenase MOFE cofact 45.9 15 0.0005 35.4 3.8 37 86-125 390-426 (483)
95 1efv_B Electron transfer flavo 45.6 32 0.0011 29.8 5.5 40 88-127 107-152 (255)
96 4hn9_A Iron complex transport 45.6 24 0.00081 31.9 5.0 37 91-127 110-146 (335)
97 3gl9_A Response regulator; bet 45.6 40 0.0014 24.5 5.6 40 89-128 38-86 (122)
98 2xdq_B Light-independent proto 45.5 18 0.00062 35.0 4.4 35 88-125 363-397 (511)
99 3pfn_A NAD kinase; structural 45.4 16 0.00056 33.5 3.8 53 322-394 108-164 (365)
100 3u7q_B Nitrogenase molybdenum- 44.4 24 0.00081 34.3 5.0 36 87-125 428-470 (523)
101 1eiw_A Hypothetical protein MT 44.2 30 0.001 25.5 4.4 65 318-393 36-109 (111)
102 1efp_B ETF, protein (electron 44.2 32 0.0011 29.7 5.4 40 88-127 104-149 (252)
103 1p3y_1 MRSD protein; flavoprot 44.2 1.2E+02 0.0041 24.8 8.6 138 241-393 9-185 (194)
104 3afo_A NADH kinase POS5; alpha 44.2 24 0.00083 32.7 4.8 52 323-394 115-171 (388)
105 3sbx_A Putative uncharacterize 43.5 1.3E+02 0.0045 24.5 9.7 43 306-349 92-145 (189)
106 3oow_A Phosphoribosylaminoimid 42.5 1.3E+02 0.0043 24.0 12.6 138 242-413 6-155 (166)
107 1pno_A NAD(P) transhydrogenase 42.1 27 0.00093 27.7 4.0 23 5-27 41-63 (180)
108 1qkk_A DCTD, C4-dicarboxylate 41.9 90 0.0031 23.6 7.4 47 341-393 74-120 (155)
109 3md9_A Hemin-binding periplasm 41.3 30 0.001 29.6 4.8 35 91-125 53-89 (255)
110 1d4o_A NADP(H) transhydrogenas 41.3 28 0.00097 27.7 4.0 23 5-27 40-62 (184)
111 3trh_A Phosphoribosylaminoimid 40.6 1.4E+02 0.0047 23.8 11.7 140 241-413 6-156 (169)
112 1mio_A Nitrogenase molybdenum 39.9 25 0.00085 34.2 4.4 35 87-124 446-480 (533)
113 3qjg_A Epidermin biosynthesis 39.9 25 0.00087 28.4 3.7 30 6-35 20-49 (175)
114 1t35_A Hypothetical protein YV 39.8 1.5E+02 0.0052 24.1 11.3 102 229-350 23-135 (191)
115 2a33_A Hypothetical protein; s 39.7 1.3E+02 0.0044 25.1 8.3 44 306-350 93-147 (215)
116 1xmp_A PURE, phosphoribosylami 39.5 1.4E+02 0.0049 23.7 11.8 141 241-413 11-161 (170)
117 4ep4_A Crossover junction endo 39.4 74 0.0025 25.4 6.4 50 80-129 46-110 (166)
118 4grd_A N5-CAIR mutase, phospho 39.2 1.5E+02 0.005 23.8 10.6 141 241-413 12-162 (173)
119 3ors_A N5-carboxyaminoimidazol 38.9 1.4E+02 0.0049 23.6 11.2 139 242-413 4-153 (163)
120 2fsv_C NAD(P) transhydrogenase 38.9 32 0.0011 28.1 4.0 23 5-27 64-86 (203)
121 2an1_A Putative kinase; struct 38.9 19 0.00065 31.9 3.1 28 323-350 64-95 (292)
122 1hjr_A Holliday junction resol 38.8 47 0.0016 26.3 5.1 47 83-129 45-106 (158)
123 3lp6_A Phosphoribosylaminoimid 38.8 1.5E+02 0.0051 23.7 12.0 138 241-413 7-155 (174)
124 3gi1_A LBP, laminin-binding pr 38.7 1.2E+02 0.004 26.6 8.3 84 14-126 174-259 (286)
125 1djl_A Transhydrogenase DIII; 38.4 32 0.0011 28.1 4.0 23 5-27 63-85 (207)
126 2jk1_A HUPR, hydrogenase trans 38.4 1.2E+02 0.004 22.4 7.7 48 341-393 71-118 (139)
127 3tov_A Glycosyl transferase fa 37.5 1E+02 0.0036 27.8 8.0 86 6-128 205-290 (349)
128 1n2z_A Vitamin B12 transport p 36.9 44 0.0015 28.3 5.1 37 91-127 51-89 (245)
129 2p2s_A Putative oxidoreductase 36.8 2.1E+02 0.0071 25.4 10.0 110 242-371 6-123 (336)
130 3kuu_A Phosphoribosylaminoimid 36.6 1.6E+02 0.0056 23.5 11.6 140 241-413 12-162 (174)
131 2r7a_A Bacterial heme binding 36.4 39 0.0013 28.8 4.8 35 91-125 53-89 (256)
132 2etv_A Iron(III) ABC transport 36.3 30 0.001 31.4 4.1 36 91-126 90-126 (346)
133 3t6k_A Response regulator rece 36.3 67 0.0023 23.8 5.7 40 90-129 41-89 (136)
134 3psh_A Protein HI_1472; substr 35.8 40 0.0014 30.1 4.9 37 91-127 78-115 (326)
135 3f6p_A Transcriptional regulat 35.7 67 0.0023 23.1 5.5 41 89-129 38-84 (120)
136 2q8p_A Iron-regulated surface 35.7 32 0.0011 29.5 4.0 37 91-127 54-91 (260)
137 3l4e_A Uncharacterized peptida 35.5 70 0.0024 26.5 5.9 47 230-276 17-63 (206)
138 3m6m_D Sensory/regulatory prot 35.4 52 0.0018 24.8 4.9 38 91-128 52-100 (143)
139 2bru_C NAD(P) transhydrogenase 35.2 30 0.001 27.6 3.3 23 5-27 48-70 (186)
140 1psw_A ADP-heptose LPS heptosy 34.6 1.8E+02 0.0061 25.8 9.2 33 91-127 257-289 (348)
141 3rg8_A Phosphoribosylaminoimid 34.2 1.7E+02 0.0059 23.0 11.7 137 242-413 3-148 (159)
142 1b93_A Protein (methylglyoxal 33.9 75 0.0026 24.9 5.4 86 6-127 25-122 (152)
143 3m3h_A OPRT, oprtase, orotate 33.4 72 0.0025 27.1 5.8 39 86-124 75-117 (234)
144 3dez_A OPRT, oprtase, orotate 33.0 76 0.0026 27.1 5.9 39 86-124 87-129 (243)
145 3i6i_A Putative leucoanthocyan 32.6 2.5E+02 0.0084 24.9 9.8 85 9-125 25-118 (346)
146 3qrx_B Melittin; calcium-bindi 31.6 9.9 0.00034 19.2 -0.0 17 331-347 1-17 (26)
147 3cg0_A Response regulator rece 31.6 81 0.0028 23.2 5.4 41 89-129 46-93 (140)
148 3ia7_A CALG4; glycosysltransfe 31.4 88 0.003 28.4 6.6 35 242-278 6-40 (402)
149 1o4v_A Phosphoribosylaminoimid 31.3 2.1E+02 0.0071 23.1 12.5 138 241-413 13-161 (183)
150 2pju_A Propionate catabolism o 31.1 57 0.002 27.5 4.7 37 87-126 144-180 (225)
151 2xz9_A Phosphoenolpyruvate-pro 31.0 1.6E+02 0.0055 26.4 7.9 80 335-427 240-320 (324)
152 1g63_A Epidermin modifying enz 30.8 33 0.0011 27.9 3.0 31 5-35 16-46 (181)
153 2r79_A Periplasmic binding pro 30.4 55 0.0019 28.5 4.7 35 91-125 53-89 (283)
154 3a10_A Response regulator; pho 30.2 1.1E+02 0.0039 21.4 5.9 39 90-128 38-83 (116)
155 1tmy_A CHEY protein, TMY; chem 29.9 95 0.0033 22.0 5.5 39 91-129 41-86 (120)
156 3c3m_A Response regulator rece 29.8 93 0.0032 23.0 5.5 39 90-128 40-87 (138)
157 3bfj_A 1,3-propanediol oxidore 29.4 3.3E+02 0.011 24.8 10.1 97 9-129 23-145 (387)
158 2oxj_A Hybrid alpha/beta pepti 29.4 77 0.0026 17.5 3.6 29 382-412 4-32 (34)
159 3gt7_A Sensor protein; structu 29.3 86 0.003 23.8 5.3 40 89-128 43-91 (154)
160 3s40_A Diacylglycerol kinase; 29.0 53 0.0018 29.1 4.4 30 322-351 63-98 (304)
161 3iqw_A Tail-anchored protein t 28.6 3.1E+02 0.011 24.4 9.6 28 4-31 30-57 (334)
162 1p9o_A Phosphopantothenoylcyst 28.4 35 0.0012 30.6 3.0 22 8-29 69-90 (313)
163 1zgz_A Torcad operon transcrip 28.3 1E+02 0.0035 21.9 5.4 39 90-128 39-83 (122)
164 3lqk_A Dipicolinate synthase s 28.0 43 0.0015 27.7 3.3 30 6-35 23-52 (201)
165 1fy2_A Aspartyl dipeptidase; s 27.8 1.4E+02 0.0048 25.0 6.7 44 228-273 21-64 (229)
166 1pjq_A CYSG, siroheme synthase 27.7 3.8E+02 0.013 25.2 10.3 144 241-413 13-167 (457)
167 1z0s_A Probable inorganic poly 27.6 27 0.00093 30.7 2.1 28 323-350 69-99 (278)
168 2qv7_A Diacylglycerol kinase D 27.5 1.1E+02 0.0038 27.4 6.4 29 323-351 81-115 (337)
169 3mc3_A DSRE/DSRF-like family p 27.2 88 0.003 23.7 4.8 32 4-35 32-63 (134)
170 2rjn_A Response regulator rece 27.0 1.1E+02 0.0036 23.2 5.5 41 89-129 43-90 (154)
171 3lrx_A Putative hydrogenase; a 27.0 38 0.0013 26.6 2.8 26 4-30 35-60 (158)
172 4e7p_A Response regulator; DNA 26.9 1E+02 0.0036 23.1 5.4 43 87-129 56-105 (150)
173 4e5s_A MCCFLIKE protein (BA_56 26.9 79 0.0027 28.5 5.1 72 255-350 63-136 (331)
174 3tsa_A SPNG, NDP-rhamnosyltran 26.6 69 0.0023 29.1 4.9 29 320-350 114-143 (391)
175 1xhf_A DYE resistance, aerobic 26.5 1.2E+02 0.0042 21.5 5.6 38 91-128 41-84 (123)
176 4b4o_A Epimerase family protei 26.4 42 0.0014 29.3 3.3 21 9-29 15-35 (298)
177 2qr3_A Two-component system re 26.3 92 0.0031 22.9 4.9 40 90-129 40-91 (140)
178 3r8n_B 30S ribosomal protein S 26.3 1.7E+02 0.0057 24.5 6.6 32 97-128 149-182 (218)
179 3to5_A CHEY homolog; alpha(5)b 26.2 94 0.0032 23.5 4.8 47 341-393 86-132 (134)
180 1srr_A SPO0F, sporulation resp 26.1 1.1E+02 0.0037 21.9 5.2 38 91-128 41-85 (124)
181 1u7z_A Coenzyme A biosynthesis 26.0 51 0.0017 27.9 3.4 21 8-28 38-58 (226)
182 3zqu_A Probable aromatic acid 25.8 39 0.0013 28.2 2.6 30 6-35 19-48 (209)
183 3i42_A Response regulator rece 25.7 1.1E+02 0.0039 21.9 5.3 40 88-127 38-86 (127)
184 3n0r_A Response regulator; sig 25.6 1E+02 0.0036 26.8 5.7 38 91-128 199-243 (286)
185 2rdm_A Response regulator rece 25.4 1.2E+02 0.0043 21.8 5.5 40 89-128 41-89 (132)
186 3m48_A General control protein 25.2 80 0.0027 17.4 2.9 27 383-411 4-30 (33)
187 3goc_A Endonuclease V; alpha-b 25.2 1E+02 0.0034 26.2 5.0 37 90-126 98-143 (237)
188 2a9o_A Response regulator; ess 24.9 1.4E+02 0.0048 21.0 5.6 39 91-129 39-83 (120)
189 2hy6_A General control protein 24.3 99 0.0034 17.1 3.7 29 382-412 4-32 (34)
190 2hy5_A Putative sulfurtransfer 24.1 90 0.0031 23.4 4.3 32 4-35 17-49 (130)
191 4dim_A Phosphoribosylglycinami 24.1 2.5E+02 0.0085 25.6 8.3 75 7-120 19-97 (403)
192 3h4t_A Glycosyltransferase GTF 24.0 1.6E+02 0.0055 27.0 6.9 35 243-279 3-37 (404)
193 2ejb_A Probable aromatic acid 23.9 44 0.0015 27.3 2.6 30 6-35 16-45 (189)
194 4fzr_A SSFS6; structural genom 23.7 1E+02 0.0035 28.1 5.5 35 242-278 17-51 (398)
195 3eul_A Possible nitrate/nitrit 23.5 1.2E+02 0.004 22.8 5.1 43 87-129 51-100 (152)
196 1ass_A Thermosome; chaperonin, 23.5 2.5E+02 0.0084 22.0 6.9 49 75-123 50-99 (159)
197 1efd_N Ferrichrome-binding per 23.4 57 0.002 28.0 3.5 34 91-125 60-93 (266)
198 3tl4_X Glutaminyl-tRNA synthet 23.3 54 0.0018 26.8 2.9 44 360-413 107-154 (187)
199 3hn2_A 2-dehydropantoate 2-red 23.1 77 0.0026 28.1 4.3 33 9-49 16-48 (312)
200 1mb3_A Cell division response 22.8 1.3E+02 0.0045 21.3 5.1 37 91-127 39-84 (124)
201 3ox4_A Alcohol dehydrogenase 2 22.7 1.1E+02 0.0037 28.2 5.4 39 91-129 82-141 (383)
202 3twe_A Alpha4H; unknown functi 22.7 74 0.0025 15.9 2.2 15 399-413 12-26 (27)
203 2gkg_A Response regulator homo 22.6 1E+02 0.0036 21.9 4.5 46 341-393 79-124 (127)
204 3zzm_A Bifunctional purine bio 22.6 1.1E+02 0.0036 29.4 5.1 35 7-50 23-57 (523)
205 2l82_A Designed protein OR32; 22.5 2.1E+02 0.0071 20.6 5.5 33 243-279 3-35 (162)
206 3kcn_A Adenylate cyclase homol 22.5 2.4E+02 0.0083 20.9 7.0 47 341-393 75-122 (151)
207 3cz5_A Two-component response 22.2 1.7E+02 0.0058 21.9 5.9 38 91-128 45-89 (153)
208 3uhj_A Probable glycerol dehyd 22.2 66 0.0022 29.8 3.7 29 322-351 106-139 (387)
209 2rjn_A Response regulator rece 22.0 51 0.0017 25.1 2.6 47 341-393 78-125 (154)
210 3kkj_A Amine oxidase, flavin-c 22.0 47 0.0016 27.9 2.7 19 8-26 15-33 (336)
211 2w36_A Endonuclease V; hypoxan 21.9 1.5E+02 0.0053 24.9 5.6 40 88-127 92-140 (225)
212 3i83_A 2-dehydropantoate 2-red 21.9 75 0.0025 28.3 4.0 33 9-49 16-48 (320)
213 1gml_A T-complex protein 1 sub 21.8 2.5E+02 0.0086 22.4 6.8 49 75-123 56-105 (178)
214 3vot_A L-amino acid ligase, BL 21.7 2.9E+02 0.0099 25.4 8.3 34 88-121 66-101 (425)
215 3sr3_A Microcin immunity prote 21.7 1E+02 0.0035 27.8 4.9 72 255-350 64-137 (336)
216 3rsc_A CALG2; TDP, enediyne, s 21.6 1.1E+02 0.0038 28.0 5.3 35 242-278 22-56 (415)
217 2bni_A General control protein 21.4 1.1E+02 0.0036 17.0 2.9 28 382-411 4-31 (34)
218 3io3_A DEHA2D07832P; chaperone 21.4 2.1E+02 0.0073 25.8 7.0 26 4-29 32-59 (348)
219 4ehi_A Bifunctional purine bio 21.2 1E+02 0.0035 29.6 4.7 44 7-62 37-80 (534)
220 3h5i_A Response regulator/sens 21.2 1.8E+02 0.0062 21.3 5.7 38 91-128 43-88 (140)
221 4h1h_A LMO1638 protein; MCCF-l 21.1 1.1E+02 0.0037 27.5 4.8 28 255-282 63-90 (327)
222 2o1e_A YCDH; alpha-beta protei 21.1 2.3E+02 0.0078 25.1 7.0 40 87-126 229-270 (312)
223 3cu5_A Two component transcrip 21.0 1.5E+02 0.0051 21.9 5.2 37 91-127 43-86 (141)
224 3ox4_A Alcohol dehydrogenase 2 21.0 1.3E+02 0.0044 27.7 5.5 44 230-275 21-64 (383)
225 2j48_A Two-component sensor ki 20.9 1.6E+02 0.0056 20.3 5.2 38 91-128 39-85 (119)
226 3n53_A Response regulator rece 20.8 1.1E+02 0.0037 22.6 4.3 40 89-128 38-86 (140)
227 2hwg_A Phosphoenolpyruvate-pro 20.8 2.5E+02 0.0086 27.4 7.7 82 336-430 490-572 (575)
228 1fmt_A Methionyl-tRNA FMet for 20.7 3.9E+02 0.013 23.6 8.5 41 88-128 72-113 (314)
229 3f6c_A Positive transcription 20.7 1.2E+02 0.004 22.0 4.5 38 91-128 40-84 (134)
230 1vi6_A 30S ribosomal protein S 20.7 1.1E+02 0.0039 25.3 4.4 32 97-128 115-148 (208)
231 1wek_A Hypothetical protein TT 20.6 3.6E+02 0.012 22.4 7.7 100 229-349 59-169 (217)
232 3tqq_A Methionyl-tRNA formyltr 20.6 3.3E+02 0.011 24.1 7.9 41 88-128 71-112 (314)
233 1xw8_A UPF0271 protein YBGL; N 20.5 1.2E+02 0.0041 25.9 4.6 41 85-125 119-159 (252)
234 1kgs_A DRRD, DNA binding respo 20.5 1.9E+02 0.0065 23.4 6.2 40 91-130 40-86 (225)
235 3fet_A Electron transfer flavo 20.4 1.6E+02 0.0054 23.3 5.2 40 86-127 60-102 (166)
236 2b4a_A BH3024; flavodoxin-like 20.4 1.3E+02 0.0046 21.9 4.8 38 88-125 50-95 (138)
237 3i7m_A XAA-Pro dipeptidase; st 20.3 41 0.0014 25.6 1.6 34 2-35 1-34 (140)
238 3qw4_B UMP synthase; N-termina 20.2 1.6E+02 0.0054 27.8 6.0 39 85-123 304-344 (453)
239 1p3y_1 MRSD protein; flavoprot 20.1 45 0.0015 27.4 1.9 29 7-35 24-52 (194)
240 2bw0_A 10-FTHFDH, 10-formyltet 20.1 2.1E+02 0.0071 25.6 6.5 41 88-128 90-131 (329)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.9e-56 Score=431.94 Aligned_cols=403 Identities=25% Similarity=0.345 Sum_probs=303.2
Q ss_pred CCChHHHHHHHHHHHhCC--CEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHH
Q 046033 1 HGHITPYLALAKKLSQQN--FHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTL 78 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~G--h~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (434)
|||++|++.||+.|+.+| +.|||++++.+...+.+... ....+++|+.+ | +|++++ .+...+ ....+..+
T Consensus 24 ~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~-~~~~~i~~~~i--p---dglp~~-~~~~~~-~~~~~~~~ 95 (454)
T 3hbf_A 24 GTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN-EFLPNIKYYNV--H---DGLPKG-YVSSGN-PREPIFLF 95 (454)
T ss_dssp SSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS-CCCTTEEEEEC--C---CCCCTT-CCCCSC-TTHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc-cCCCCceEEec--C---CCCCCC-ccccCC-hHHHHHHH
Confidence 799999999999999999 99999999866665544210 11257999887 4 678776 444433 22233333
Q ss_pred HHHH-HHhHHHHHHHHhh--cCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhccCC-----------CCCC
Q 046033 79 IEAF-DAAKPAFCNVLET--LKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSS-----------LKFP 144 (434)
Q Consensus 79 ~~~~-~~~~~~~~~~l~~--~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~-----------~~~p 144 (434)
.... ..+.+.+.+++++ .++|+||+|+++.|+..+|+++|||++.+++.+++.+..+.+... ...+
T Consensus 96 ~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (454)
T 3hbf_A 96 IKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKS 175 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCccccccc
Confidence 3332 2334444444443 378999999999999999999999999999999887764332110 0000
Q ss_pred CC-CcCCCCcccccccccccc--ccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCCC
Q 046033 145 FP-EFDLPESEIQKMTQFKHR--IVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEPI 221 (434)
Q Consensus 145 ~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~~ 221 (434)
.. ...++.+....+...+.. .........+..+.+.. ++.+++||++++|+++++.+++.+ +++++|||+.....
T Consensus 176 ~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~-~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~vGPl~~~~~ 253 (454)
T 3hbf_A 176 IDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPR-ANAVAINSFATIHPLIENELNSKF-KLLLNVGPFNLTTP 253 (454)
T ss_dssp BCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGG-SSCEEESSCGGGCHHHHHHHHTTS-SCEEECCCHHHHSC
T ss_pred cccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhcc-CCEEEECChhHhCHHHHHHHHhcC-CCEEEECCcccccc
Confidence 00 011222222223332221 11122334455556666 899999999999999999888776 59999999965322
Q ss_pred CCCCCCchhhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcC
Q 046033 222 YTDNNNDTKIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQG 301 (434)
Q Consensus 222 ~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~ 301 (434)
......+.++.+||+.++++++|||+|||+...+.+.+.+++.++++.+.+|||+++... .+.+|+++.++.
T Consensus 254 ~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~------~~~lp~~~~~~~-- 325 (454)
T 3hbf_A 254 QRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP------KEKLPKGFLERT-- 325 (454)
T ss_dssp CSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH------HHHSCTTHHHHT--
T ss_pred cccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc------hhcCCHhHHhhc--
Confidence 112223578999999988889999999999988889999999999999999999987531 245788887654
Q ss_pred CCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhh-ceeeeecccccCCccc
Q 046033 302 NNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI-GVGLEVPRDEINQRVR 380 (434)
Q Consensus 302 ~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~-G~g~~~~~~~~~~~~~ 380 (434)
.+|+.+.+|+||..+|+|+++++|||||||||+.|++++|||+|++|.++||+.||+++++. |+|+.+. ...++
T Consensus 326 -~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~----~~~~~ 400 (454)
T 3hbf_A 326 -KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD----NGVLT 400 (454)
T ss_dssp -TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG----GGSCC
T ss_pred -CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec----CCCCC
Confidence 45777889999999999999889999999999999999999999999999999999999995 9999997 45689
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHh----cc--hHHHHHHHHHH
Q 046033 381 KEELARVFKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKL 426 (434)
Q Consensus 381 ~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~----~~--~~~~~~~ve~l 426 (434)
+++|+++|+++|++++..+||++|++|++.+++ +| ..++.++++++
T Consensus 401 ~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i 452 (454)
T 3hbf_A 401 KESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIV 452 (454)
T ss_dssp HHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHH
Confidence 999999999999964456899999999999986 44 77888999886
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.3e-53 Score=420.17 Aligned_cols=406 Identities=30% Similarity=0.439 Sum_probs=296.6
Q ss_pred CCChHHHHHHHHHHHhC-CCEEEEEeCCC--chhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHH
Q 046033 1 HGHITPYLALAKKLSQQ-NFHIYFCSTPI--NLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPT 77 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~-Gh~V~~~~~~~--~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (434)
+||++|+++||++|++| ||+|||++++. +...+.+.. .....+++|++++.+ . .+ . .. .. .+....
T Consensus 17 ~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~-~~~~~~i~~~~l~~~---~-~~-~-~~---~~-~~~~~~ 85 (480)
T 2vch_A 17 MGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVL-DSLPSSISSVFLPPV---D-LT-D-LS---SS-TRIESR 85 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHH-C-CCTTEEEEECCCC---C-CT-T-SC---TT-CCHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhc-cccCCCceEEEcCCC---C-CC-C-CC---Cc-hhHHHH
Confidence 59999999999999998 99999999987 344444310 111268999888533 1 11 1 10 00 123333
Q ss_pred HHHHHHHhHHHHHHHHhhc----CC-CEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhc---------------
Q 046033 78 LIEAFDAAKPAFCNVLETL----KP-TLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQ--------------- 137 (434)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~----~p-DlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~--------------- 137 (434)
+......+.+.+.+++++. ++ |+||+|.++.|+..+|+++|||++.+++.+......+.+
T Consensus 86 ~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (480)
T 2vch_A 86 ISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFREL 165 (480)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSCGGGC
T ss_pred HHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCccccc
Confidence 4445555667777777763 78 999999988999999999999999999988765432211
Q ss_pred ---cCCCCCCCCCcCCCCccccccccccc-cccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhh---cCCce
Q 046033 138 ---NSSLKFPFPEFDLPESEIQKMTQFKH-RIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYI---TKKET 210 (434)
Q Consensus 138 ---~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 210 (434)
+..++++ .+....+...+. +.......+.+....+.. +..+++|++.+++++.+..+.+. + +++
T Consensus 166 ~~~~~~Pg~~-------p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~nt~~ele~~~~~~l~~~~~~~-~~v 236 (480)
T 2vch_A 166 TEPLMLPGCV-------PVAGKDFLDPAQDRKDDAYKWLLHNTKRYKE-AEGILVNTFFELEPNAIKALQEPGLDK-PPV 236 (480)
T ss_dssp SSCBCCTTCC-------CBCGGGSCGGGSCTTSHHHHHHHHHHHHGGG-CSEEEESCCTTTSHHHHHHHHSCCTTC-CCE
T ss_pred CCcccCCCCC-------CCChHHCchhhhcCCchHHHHHHHHHHhccc-CCEEEEcCHHHHhHHHHHHHHhcccCC-CcE
Confidence 1111221 111111111111 001111222233334444 77889999999999877766532 3 589
Q ss_pred eeeCCCCCCCCCC-CCCCchhhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCC-----
Q 046033 211 IPVGPLVQEPIYT-DNNNDTKIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGN----- 284 (434)
Q Consensus 211 ~~vGpl~~~~~~~-~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~----- 284 (434)
++|||+....... ....+.++.+||+.++++++|||||||+...+.+.+.+++.++++.+.+|||+++.....+
T Consensus 237 ~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~ 316 (480)
T 2vch_A 237 YPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYF 316 (480)
T ss_dssp EECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTT
T ss_pred EEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccccccc
Confidence 9999997653211 0235678999999988889999999999888889999999999999999999998653210
Q ss_pred -----ccccccCchhHHHhhcCCCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHH
Q 046033 285 -----FTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAK 359 (434)
Q Consensus 285 -----~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~ 359 (434)
.+..+.+|+++.++. ...++.+.+|+||..+|+|++|++|||||||||+.||+++|||+|++|.++||+.||+
T Consensus 317 ~~~~~~~~~~~lp~~~~~~~--~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~ 394 (480)
T 2vch_A 317 DSHSQTDPLTFLPPGFLERT--KKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAV 394 (480)
T ss_dssp CC--CSCGGGGSCTTHHHHT--TTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred ccccccchhhhcCHHHHHHh--CCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHH
Confidence 122246889998887 6777888779999999999999999999999999999999999999999999999999
Q ss_pred HH-HhhceeeeecccccCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHh----cc--hHHHHHHHHHHHhh
Q 046033 360 MV-ADIGVGLEVPRDEINQRVRKEELARVFKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLLQL 429 (434)
Q Consensus 360 ~~-~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~----~~--~~~~~~~ve~l~~~ 429 (434)
++ ++.|+|+.+...+ ...+++++|+++|+++|+++++++||+||++|++.+++ +| ..++.++++.+.+.
T Consensus 395 ~l~~~~G~g~~l~~~~-~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~~ 470 (480)
T 2vch_A 395 LLSEDIRAALRPRAGD-DGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAH 470 (480)
T ss_dssp HHHHTTCCEECCCCCT-TSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEeeccc-CCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 97 7999999997421 23689999999999999977778999999999999986 34 67788999988763
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.7e-52 Score=411.27 Aligned_cols=408 Identities=27% Similarity=0.461 Sum_probs=287.2
Q ss_pred CCChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcc-cC--CCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHH
Q 046033 1 HGHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQE-KF--STSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPT 77 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~-~~--~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (434)
+||++|++.||++|++|||+|||++++.+...+.+.... .. ..|++|++++ ++++.. .... ....+....
T Consensus 19 ~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~lp~~-~~~~-~~~~~~~~~ 91 (482)
T 2pq6_A 19 QGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGLTPM-EGDG-DVSQDVPTL 91 (482)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCCC-----------CCHHHH
T ss_pred chhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCCCCc-cccc-CcchhHHHH
Confidence 599999999999999999999999999877666542100 00 1389998883 345432 1000 011122222
Q ss_pred HHHHHHHhHHHHHHHHhh-------cCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhc---cCCCCC-CCC
Q 046033 78 LIEAFDAAKPAFCNVLET-------LKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQ---NSSLKF-PFP 146 (434)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~-------~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~---~~~~~~-p~~ 146 (434)
+......+.+.+.++++. .+||+||+|.++.|+..+|+++|||++.+++.+......+.+ +...++ |..
T Consensus 92 ~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 171 (482)
T 2pq6_A 92 CQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFK 171 (482)
T ss_dssp HHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTCSSCS
T ss_pred HHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCCCCCc
Confidence 222223445556666653 479999999988999999999999999999998776543211 111111 211
Q ss_pred Cc-------------CCCC---cccccccccccccc---CCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcC
Q 046033 147 EF-------------DLPE---SEIQKMTQFKHRIV---NGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITK 207 (434)
Q Consensus 147 ~~-------------~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (434)
.. .++. +....+..++.... .......+..+.... ++.+++|++++|+++.++.+++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vl~nt~~~le~~~~~~~~~~~- 249 (482)
T 2pq6_A 172 DESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNK-DTTILLNTFNELESDVINALSSTI- 249 (482)
T ss_dssp SGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCT-TCCEEESSCGGGGHHHHHHHHTTC-
T ss_pred cccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhcc-CCEEEEcChHHHhHHHHHHHHHhC-
Confidence 00 0111 11111112221000 011112233344444 888999999999999998888877
Q ss_pred CceeeeCCCCCC-CCC-----------CCCCCchhhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEE
Q 046033 208 KETIPVGPLVQE-PIY-----------TDNNNDTKIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIW 275 (434)
Q Consensus 208 ~~~~~vGpl~~~-~~~-----------~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~ 275 (434)
+++++|||+... +.. ...+.+.++.+||+.++++++|||+|||+...+.+.+.+++.++++.+.+|||
T Consensus 250 ~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~ 329 (482)
T 2pq6_A 250 PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLW 329 (482)
T ss_dssp TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEE
Confidence 799999999642 110 01123456899999988889999999999887888899999999999999999
Q ss_pred EEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChh
Q 046033 276 VVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQL 355 (434)
Q Consensus 276 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~ 355 (434)
+++.....+. ...+|+++.++. ..|+.+.+|+||..+|+|+++++||||||+||+.||+++|||+|++|.+.||+
T Consensus 330 ~~~~~~~~~~--~~~l~~~~~~~~---~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 404 (482)
T 2pq6_A 330 IIRPDLVIGG--SVIFSSEFTNEI---ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQP 404 (482)
T ss_dssp ECCGGGSTTT--GGGSCHHHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred EEcCCccccc--cccCcHhHHHhc---CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchH
Confidence 9875421110 123777776654 35788889999999999999999999999999999999999999999999999
Q ss_pred hHHHHHH-hhceeeeecccccCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHh----cc--hHHHHHHHHHHH
Q 046033 356 FNAKMVA-DIGVGLEVPRDEINQRVRKEELARVFKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLL 427 (434)
Q Consensus 356 ~na~~~~-~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~----~~--~~~~~~~ve~l~ 427 (434)
.||++++ +.|+|+.+. ..+++++|+++|+++|++++..+||++|+++++.+++ +| ..++.++++.+.
T Consensus 405 ~na~~~~~~~G~g~~l~-----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 405 TDCRFICNEWEIGMEID-----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHHTSCCEEECC-----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCEEEEEC-----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 9999996 789999995 3589999999999999943333799999999999986 35 788999998873
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.7e-50 Score=394.09 Aligned_cols=405 Identities=25% Similarity=0.367 Sum_probs=282.3
Q ss_pred CCChHHHHHHHHHHHhCCCE--EEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHH
Q 046033 1 HGHITPYLALAKKLSQQNFH--IYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTL 78 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~Gh~--V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (434)
+||++|+++||++|++|||+ |||++++.....+.+........+++|+++ + +++++. ..... ........+
T Consensus 18 ~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i--~---~glp~~-~~~~~-~~~~~~~~~ 90 (456)
T 2c1x_A 18 STHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDI--S---DGVPEG-YVFAG-RPQEDIELF 90 (456)
T ss_dssp SSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEEC--C---CCCCTT-CCCCC-CTTHHHHHH
T ss_pred cchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeC--C---CCCCCc-ccccC-ChHHHHHHH
Confidence 79999999999999999655 577888754444333110011257999877 4 466655 32111 112223333
Q ss_pred HHHHH-HhHHHHHHHHhh--cCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhc--------cCCC--C-CC
Q 046033 79 IEAFD-AAKPAFCNVLET--LKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQ--------NSSL--K-FP 144 (434)
Q Consensus 79 ~~~~~-~~~~~~~~~l~~--~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~--------~~~~--~-~p 144 (434)
..... .+.+.+.+++++ .+||+||+|.++.|+..+|+++|||++.+++.+.+....+.+ .... . ..
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (456)
T 2c1x_A 91 TRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGRED 170 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCCTTCTT
T ss_pred HHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcccccccc
Confidence 32221 222233333333 589999999888899999999999999999997765532211 0000 0 00
Q ss_pred CCCcCCCCccc---cccccccccccC---CchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCC
Q 046033 145 FPEFDLPESEI---QKMTQFKHRIVN---GTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQ 218 (434)
Q Consensus 145 ~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~ 218 (434)
.....++.+.. ..+...+..... ......+....... ++.+++|++++++++.++.+++.+ +++++|||+..
T Consensus 171 ~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vl~ns~~~le~~~~~~~~~~~-~~~~~vGpl~~ 248 (456)
T 2c1x_A 171 ELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPK-ATAVFINSFEELDDSLTNDLKSKL-KTYLNIGPFNL 248 (456)
T ss_dssp CBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGG-SSCEEESSCGGGCHHHHHHHHHHS-SCEEECCCHHH
T ss_pred cccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhh-CCEEEECChHHHhHHHHHHHHhcC-CCEEEecCccc
Confidence 00001111111 111111100000 01122333344455 888999999999999888888776 58999999965
Q ss_pred CCCCCCCCCchhhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHh
Q 046033 219 EPIYTDNNNDTKIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEE 298 (434)
Q Consensus 219 ~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~ 298 (434)
.........+.++.+|++..+++++|||+|||.+..+.+.+.+++.++++.+.+|||+++... ...+|+++.++
T Consensus 249 ~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~------~~~l~~~~~~~ 322 (456)
T 2c1x_A 249 ITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA------RVHLPEGFLEK 322 (456)
T ss_dssp HC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG------GGGSCTTHHHH
T ss_pred CcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc------hhhCCHHHHhh
Confidence 321011122356889999987889999999999887888899999999999999999986531 23467777654
Q ss_pred hcCCCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhh-ceeeeecccccCC
Q 046033 299 IQGNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI-GVGLEVPRDEINQ 377 (434)
Q Consensus 299 ~~~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~-G~g~~~~~~~~~~ 377 (434)
. ..|+.+.+|+||..+|+|+++++||||||+||+.||+++|||+|++|.+.||+.||+++++. |+|+.+. ..
T Consensus 323 ~---~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~----~~ 395 (456)
T 2c1x_A 323 T---RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE----GG 395 (456)
T ss_dssp H---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG----GG
T ss_pred c---CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec----CC
Confidence 3 35788889999999999999999999999999999999999999999999999999999999 9999997 35
Q ss_pred cccHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHh----cc--hHHHHHHHHHHH
Q 046033 378 RVRKEELARVFKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKLL 427 (434)
Q Consensus 378 ~~~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~----~~--~~~~~~~ve~l~ 427 (434)
.+++++|+++|+++|++++.++||+||+++++.+++ +| ..++.++++.+.
T Consensus 396 ~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 396 VFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp SCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 689999999999999954345899999999999976 44 778899999874
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.2e-50 Score=393.81 Aligned_cols=402 Identities=24% Similarity=0.380 Sum_probs=287.7
Q ss_pred CCChHHHHHHHHHHHhC--CCEEEEEeCCCch-----hhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccc
Q 046033 1 HGHITPYLALAKKLSQQ--NFHIYFCSTPINL-----QSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRH 73 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~--Gh~V~~~~~~~~~-----~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (434)
+||++|+++||++|+++ ||+|||++++.+. +.+.+. .+.+.|++|+.++.+ .++.. +.... .+
T Consensus 20 ~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~--~~~~~~i~~~~lp~~----~~~~~--~~~~~--~~ 89 (463)
T 2acv_A 20 IGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSV--LASQPQIQLIDLPEV----EPPPQ--ELLKS--PE 89 (463)
T ss_dssp TTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHH--HCSCTTEEEEECCCC----CCCCG--GGGGS--HH
T ss_pred cchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhc--ccCCCCceEEECCCC----CCCcc--cccCC--cc
Confidence 79999999999999999 9999999998753 222210 112368999888533 12221 10111 11
Q ss_pred cHHHHHHHHHHhHHHHHHHHhh---cCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhc-cCC---CCCCCC
Q 046033 74 LIPTLIEAFDAAKPAFCNVLET---LKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQ-NSS---LKFPFP 146 (434)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~---~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~-~~~---~~~p~~ 146 (434)
.. +........+.+.+++++ .+||+||+|.++.|+..+|+++|||++.+++.+.+....+.+ +.. ..+...
T Consensus 90 ~~--~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (463)
T 2acv_A 90 FY--ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDS 167 (463)
T ss_dssp HH--HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCCCS
T ss_pred HH--HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCCCCc
Confidence 11 444555666778888887 689999999988999999999999999999988776553221 110 000000
Q ss_pred -----CcCC----CCccccccccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhc--CCceeeeCC
Q 046033 147 -----EFDL----PESEIQKMTQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYIT--KKETIPVGP 215 (434)
Q Consensus 147 -----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vGp 215 (434)
...+ +.+....+...+...........+....+.. ++.+++|++++++++.+..+.+.. ++++++|||
T Consensus 168 ~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGp 246 (463)
T 2acv_A 168 DRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRD-TKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGP 246 (463)
T ss_dssp SGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTT-SSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCC
T ss_pred cccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhccc-CCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCC
Confidence 0011 1111111111111001111222222333444 788999999999998887776655 579999999
Q ss_pred CCCCCC-CCCC---CCchhhhhhhcCCCCCceEEEEecCcc-cCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCcccccc
Q 046033 216 LVQEPI-YTDN---NNDTKIMDWLSRKEPSSVVYVSFGSEY-FLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEA 290 (434)
Q Consensus 216 l~~~~~-~~~~---~~~~~~~~~l~~~~~~~vV~vs~Gs~~-~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 290 (434)
+..... .... ..+.++.+||+.++++++|||+|||++ ..+.+.+.+++.++++.+.+|||+++.. .+.
T Consensus 247 l~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-------~~~ 319 (463)
T 2acv_A 247 LLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE-------KKV 319 (463)
T ss_dssp CCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC-------GGG
T ss_pred CcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC-------ccc
Confidence 975421 0001 234688999999888899999999998 7778889999999999999999998742 123
Q ss_pred CchhHHHhhcCCCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHH-HHhhceeee
Q 046033 291 LPQGFAEEIQGNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKM-VADIGVGLE 369 (434)
Q Consensus 291 ~p~~~~~~~~~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~-~~~~G~g~~ 369 (434)
+|+++.++.. ...++.+.+|+||..+|+|+++++||||||+||+.|++++|||+|++|.+.||+.||++ +++.|+|+.
T Consensus 320 l~~~~~~~~~-~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~ 398 (463)
T 2acv_A 320 FPEGFLEWME-LEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLG 398 (463)
T ss_dssp SCTTHHHHHH-HHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEE
T ss_pred CChhHHHhhc-cCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEE
Confidence 6666654420 03467788999999999999999999999999999999999999999999999999999 589999999
Q ss_pred e-cccccCC--cccHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHh----cc--hHHHHHHHHHH
Q 046033 370 V-PRDEINQ--RVRKEELARVFKQVVEQEEGQQIKRKAKELSESIKK----KG--DDEEINVVEKL 426 (434)
Q Consensus 370 ~-~~~~~~~--~~~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~----~~--~~~~~~~ve~l 426 (434)
+ ...+ .. .+++++|+++|+++|++ +++||++|+++++.+++ +| ..++.++++++
T Consensus 399 l~~~~~-~~~~~~~~~~l~~ai~~ll~~--~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 461 (463)
T 2acv_A 399 LRVDYR-KGSDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461 (463)
T ss_dssp SCSSCC-TTCCCCCHHHHHHHHHHHTCT--TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred EecccC-CCCccccHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHh
Confidence 8 2111 23 68999999999999962 47899999999999986 45 77889999887
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.4e-43 Score=342.27 Aligned_cols=375 Identities=19% Similarity=0.292 Sum_probs=264.4
Q ss_pred CCChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCc---cccHHH
Q 046033 1 HGHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIP---RHLIPT 77 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 77 (434)
+||++|+++||++|+++||+|+|++++.+.+.+.+ .|++|+++ + .+++.. ........ ...+..
T Consensus 23 ~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-------~g~~~~~~--~---~~~~~~-~~~~~~~~~~~~~~~~~ 89 (424)
T 2iya_A 23 HGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-------AGATPVVY--D---SILPKE-SNPEESWPEDQESAMGL 89 (424)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-------HTCEEEEC--C---CCSCCT-TCTTCCCCSSHHHHHHH
T ss_pred CcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-------CCCEEEec--C---cccccc-ccchhhcchhHHHHHHH
Confidence 49999999999999999999999999999888888 78999776 3 223222 11100011 112233
Q ss_pred HHHHHHHhHHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhccC--CCCC---------CCC
Q 046033 78 LIEAFDAAKPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNS--SLKF---------PFP 146 (434)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~--~~~~---------p~~ 146 (434)
+......+.+.+.+++++.+||+||+|.+.+++..+|+.+|||++.+++.+.........+. ...+ |..
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (424)
T 2iya_A 90 FLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADRGEEAAAPAG 169 (424)
T ss_dssp HHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCCC-----------
T ss_pred HHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccccccccccccccccc
Confidence 33444455677888888899999999988789999999999999999877642111100000 0000 000
Q ss_pred CcCCCCcc----c-----cccccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCC
Q 046033 147 EFDLPESE----I-----QKMTQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLV 217 (434)
Q Consensus 147 ~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~ 217 (434)
......+. . ..+..++. ..+... ........ .+.++++++++++++ ...+++++++|||+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~--~~~~~~~~-~~~~l~~~~~~l~~~-----~~~~~~~~~~vGp~~ 239 (424)
T 2iya_A 170 TGDAEEGAEAEDGLVRFFTRLSAFLE--EHGVDT--PATEFLIA-PNRCIVALPRTFQIK-----GDTVGDNYTFVGPTY 239 (424)
T ss_dssp ----------HHHHHHHHHHHHHHHH--HTTCCS--CHHHHHHC-CSSEEESSCTTTSTT-----GGGCCTTEEECCCCC
T ss_pred cccchhhhccchhHHHHHHHHHHHHH--HcCCCC--CHHHhccC-CCcEEEEcchhhCCC-----ccCCCCCEEEeCCCC
Confidence 00000000 0 00011111 011110 00111113 667899999988873 245778999999976
Q ss_pred CCCCCCCCCCchhhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHH
Q 046033 218 QEPIYTDNNNDTKIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAE 297 (434)
Q Consensus 218 ~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~ 297 (434)
... .+..+|++..+++++|||++||......+.+..+++++++.+.+++|.++..... +.+.+
T Consensus 240 ~~~--------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~-----~~~~~---- 302 (424)
T 2iya_A 240 GDR--------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP-----ADLGE---- 302 (424)
T ss_dssp CCC--------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCG-----GGGCS----
T ss_pred CCc--------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCCh-----HHhcc----
Confidence 431 1233577765667899999999886567888999999988888888887643211 01101
Q ss_pred hhcCCCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCC
Q 046033 298 EIQGNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQ 377 (434)
Q Consensus 298 ~~~~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~ 377 (434)
.+.|+.+.+|+||..+|+++++ +|||||+||++||+++|+|+|++|...||+.||+++++.|+|+.+. .+
T Consensus 303 ----~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~----~~ 372 (424)
T 2iya_A 303 ----VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIP----RD 372 (424)
T ss_dssp ----CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECC----GG
T ss_pred ----CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcC----cC
Confidence 3458999999999999998776 9999999999999999999999999999999999999999999987 35
Q ss_pred cccHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHh
Q 046033 378 RVRKEELARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 428 (434)
Q Consensus 378 ~~~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~ 428 (434)
.+++++|.++|+++|+ +++|+++++++++.+++.+ ...+++.++++.+
T Consensus 373 ~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 373 QVTAEKLREAVLAVAS---DPGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp GCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 6899999999999999 7899999999999998866 7788888887754
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=7.2e-43 Score=338.14 Aligned_cols=354 Identities=15% Similarity=0.162 Sum_probs=230.6
Q ss_pred CCChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCC--CCCCC-----CCCCCCCccc
Q 046033 1 HGHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPE--LHDPY-----NHTTKNIPRH 73 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~--~~~~~-----~~~~~~~~~~ 73 (434)
+||++|+++||++|++|||+|+|++++.+.+.. . .|+.++++........ .+... ..........
T Consensus 33 ~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~-------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (400)
T 4amg_A 33 LSHILPTVPLAQALRALGHEVRYATGGDIRAVA-E-------AGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSEGLGEGF 104 (400)
T ss_dssp HHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-T-------TTCEEEESSTTCCSHHHHSCCC------------CHHH
T ss_pred hhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-h-------cCCeeEecCCchhHhhhccccccccccccchhhhhHHH
Confidence 499999999999999999999999998877644 4 5777876621100000 00000 0000000011
Q ss_pred cHHHHHHHHHHhHHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCc
Q 046033 74 LIPTLIEAFDAAKPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPES 153 (434)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 153 (434)
....+..........+.+++++++||+||+|.+.+++..+|+.+|||++.+...+..........
T Consensus 105 ~~~~~~~~~~~~~~~l~~~~~~~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~--------------- 169 (400)
T 4amg_A 105 FAEMFARVSAVAVDGALRTARSWRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGAL--------------- 169 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHH---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhH---------------
Confidence 12233333444566777888999999999998889999999999999998765543221110000
Q ss_pred cccccccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhh--hcCCceeeeCCCCCCCCCCCCCCchhh
Q 046033 154 EIQKMTQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSY--ITKKETIPVGPLVQEPIYTDNNNDTKI 231 (434)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~vGpl~~~~~~~~~~~~~~~ 231 (434)
+...+. ....+............+.... +......+ ...+....+++.... ....+
T Consensus 170 ----~~~~l~------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 227 (400)
T 4amg_A 170 ----IRRAMS------KDYERHGVTGEPTGSVRLTTTP-----PSVEALLPEDRRSPGAWPMRYVPYN-------GGAVL 227 (400)
T ss_dssp ----HHHHTH------HHHHHTTCCCCCSCEEEEECCC-----HHHHHTSCGGGCCTTCEECCCCCCC-------CCEEC
T ss_pred ----HHHHHH------HHHHHhCCCcccccchhhcccC-----chhhccCcccccCCcccCccccccc-------ccccC
Confidence 000000 0011110001110122222221 11111111 011222223222221 23345
Q ss_pred hhhhcCCCCCceEEEEecCcccCC--HHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEe
Q 046033 232 MDWLSRKEPSSVVYVSFGSEYFLS--KEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQ 309 (434)
Q Consensus 232 ~~~l~~~~~~~vV~vs~Gs~~~~~--~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~ 309 (434)
.+|++..+++++|||++||+...+ .+.+..+++++++.+..++|.++...... ... .++|+.+.
T Consensus 228 ~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~---~~~-----------~~~~v~~~ 293 (400)
T 4amg_A 228 PDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLAL---LGE-----------LPANVRVV 293 (400)
T ss_dssp CTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCC---CCC-----------CCTTEEEE
T ss_pred cccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccc---ccc-----------CCCCEEEE
Confidence 568888888999999999987533 36688899999999999999876542211 111 45689999
Q ss_pred cccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHH
Q 046033 310 GWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFK 389 (434)
Q Consensus 310 ~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~ 389 (434)
+|+||..+|+|+++ ||||||+||+.||+++|||+|++|.+.||+.||+++++.|+|+.++. .+.++ ++|+
T Consensus 294 ~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~----~~~~~----~al~ 363 (400)
T 4amg_A 294 EWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEA----GSLGA----EQCR 363 (400)
T ss_dssp CCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCT----TTCSH----HHHH
T ss_pred eecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCC----CCchH----HHHH
Confidence 99999999998776 99999999999999999999999999999999999999999999973 34454 5677
Q ss_pred HHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHH
Q 046033 390 QVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKL 426 (434)
Q Consensus 390 ~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l 426 (434)
++|+ |++||++|+++++++++.+ ..++++.+|+|
T Consensus 364 ~lL~---d~~~r~~a~~l~~~~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 364 RLLD---DAGLREAALRVRQEMSEMPPPAETAAXLVAL 398 (400)
T ss_dssp HHHH---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHc---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 8999 7999999999999999987 88888888886
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.1e-41 Score=326.57 Aligned_cols=369 Identities=14% Similarity=0.154 Sum_probs=248.3
Q ss_pred CCChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHH
Q 046033 1 HGHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIE 80 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (434)
+||++|+++||++|+++||+|+|++++...+.+.+ .|++|+.++.. .... ...... .....+..
T Consensus 11 ~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-------~g~~~~~i~~~-----~~~~-~~~~~~---~~~~~~~~ 74 (415)
T 1iir_A 11 RGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-------VGVPHVPVGPS-----ARAP-IQRAKP---LTAEDVRR 74 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-------TTCCEEECCC-------------CCSC---CCHHHHHH
T ss_pred chhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-------cCCeeeeCCCC-----HHHH-hhcccc---cchHHHHH
Confidence 49999999999999999999999999998888887 88999888432 1111 111010 01111222
Q ss_pred HHHHh-HHHHHHHHh-hcCCCEEEEcC-CCch--HHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCC-cc
Q 046033 81 AFDAA-KPAFCNVLE-TLKPTLVIYDL-FQPW--AAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPE-SE 154 (434)
Q Consensus 81 ~~~~~-~~~~~~~l~-~~~pDlVi~d~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~ 154 (434)
.+... ...+.++++ ..+||+||+|. +.++ +..+|+.+|||++.+++++......+.++...+++.+ .. ..
T Consensus 75 ~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~p~~~~~~~~~----~~~~~ 150 (415)
T 1iir_A 75 FTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSPYYPPPPLGEPST----QDTID 150 (415)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCC-------------CH
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCcccCCccCCcccc----chHHH
Confidence 22222 222333443 56899999996 6678 8999999999999998876432211111100000000 00 11
Q ss_pred cccc----ccccc----------cccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCC
Q 046033 155 IQKM----TQFKH----------RIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEP 220 (434)
Q Consensus 155 ~~~~----~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~ 220 (434)
+... ..... ....+.+....+.+.... . .+++++++++++. .+..+ ++++|||+....
T Consensus 151 n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~-~~l~~~~~~l~~~----~~~~~--~~~~vG~~~~~~ 222 (415)
T 1iir_A 151 IPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYT-D-HPWVAADPVLAPL----QPTDL--DAVQTGAWILPD 222 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHC-S-SCEECSCTTTSCC----CCCSS--CCEECCCCCCCC
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCC-C-CEEEeeChhhcCC----CcccC--CeEeeCCCccCc
Confidence 0000 00000 000000000001111112 3 5788998888751 11223 789999997652
Q ss_pred CCCCCCCchhhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhc
Q 046033 221 IYTDNNNDTKIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQ 300 (434)
Q Consensus 221 ~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~ 300 (434)
....+.++.+|++.. +++|||++||+. ...+.+..+++++++.+.+++|+++..... ...
T Consensus 223 ---~~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~----~~~---------- 282 (415)
T 1iir_A 223 ---ERPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADLV----LPD---------- 282 (415)
T ss_dssp ---CCCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTCC----CSS----------
T ss_pred ---ccCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCccc----ccC----------
Confidence 234577899999865 369999999987 567888889999999999999987643211 011
Q ss_pred CCCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCccc
Q 046033 301 GNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVR 380 (434)
Q Consensus 301 ~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~ 380 (434)
.+.|+.+.+|+|+..+|+.++ ++|||||+||+.||+++|+|+|++|...||..||+++++.|+|+.+. ...++
T Consensus 283 -~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~----~~~~~ 355 (415)
T 1iir_A 283 -DGADCFAIGEVNHQVLFGRVA--AVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHD----GPIPT 355 (415)
T ss_dssp -CGGGEEECSSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS----SSSCC
T ss_pred -CCCCEEEeCcCChHHHHhhCC--EEEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCC----cCCCC
Confidence 234899999999999996555 49999999999999999999999999999999999999999999987 35689
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHh
Q 046033 381 KEELARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 428 (434)
Q Consensus 381 ~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~ 428 (434)
++++.++|+++ + +++|+++++++++.++..+ .+.+++.++++.+
T Consensus 356 ~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 356 FDSLSAALATA-L---TPETHARATAVAGTIRTDGAAVAARLLLDAVSR 400 (415)
T ss_dssp HHHHHHHHHHH-T---SHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-c---CHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHh
Confidence 99999999999 8 7899999999999988755 7788888888765
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.2e-40 Score=324.06 Aligned_cols=369 Identities=13% Similarity=0.092 Sum_probs=250.4
Q ss_pred CCChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHH
Q 046033 1 HGHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIE 80 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (434)
+||++|+++||++|+++||+|+|++++.+.+.+.+ .|++|++++.. ..+.... .... .....+..
T Consensus 11 ~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-------~g~~~~~~~~~--~~~~~~~---~~~~---~~~~~~~~ 75 (416)
T 1rrv_A 11 RGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-------VGVPHVPVGLP--QHMMLQE---GMPP---PPPEEEQR 75 (416)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-------HTCCEEECSCC--GGGCCCT---TSCC---CCHHHHHH
T ss_pred CccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-------cCCeeeecCCC--HHHHHhh---cccc---chhHHHHH
Confidence 48999999999999999999999999988888888 78999887432 1111000 0000 11111222
Q ss_pred HHHHhHHHHHHHHh--hcCCCEEEEcC-CCch--HHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCccc
Q 046033 81 AFDAAKPAFCNVLE--TLKPTLVIYDL-FQPW--AAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEI 155 (434)
Q Consensus 81 ~~~~~~~~~~~~l~--~~~pDlVi~d~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 155 (434)
.+......+.+.++ ..+||+||+|. +.++ +..+|+.+|||++.+++++........++... .+.. ..+..+
T Consensus 76 ~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~p~~~~-~~~~---~~r~~n 151 (416)
T 1rrv_A 76 LAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYD-EPTT---PGVTDI 151 (416)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCBC-SCCC---TTCCCH
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCCcccCCCCC-CCCC---chHHHH
Confidence 22222233333333 56899999995 5567 88999999999999987764321111111000 0000 000111
Q ss_pred ccccc----ccc--------c--ccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCCC
Q 046033 156 QKMTQ----FKH--------R--IVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEPI 221 (434)
Q Consensus 156 ~~~~~----~~~--------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~~ 221 (434)
..... ... . ...+.+....+.+.... . .++++++++++++ +..+ ++++|||+..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~-~~l~~~~~~l~~~-----~~~~--~~~~vG~~~~~~- 221 (416)
T 1rrv_A 152 RVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHG-E-RPLLAADPVLAPL-----QPDV--DAVQTGAWLLSD- 221 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTC-S-SCEECSCTTTSCC-----CSSC--CCEECCCCCCCC-
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccC-C-CeEEccCccccCC-----CCCC--CeeeECCCccCc-
Confidence 10000 000 0 00000000001111222 3 6889998888762 1222 789999997652
Q ss_pred CCCCCCchhhhhhhcCCCCCceEEEEecCccc-CCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhc
Q 046033 222 YTDNNNDTKIMDWLSRKEPSSVVYVSFGSEYF-LSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQ 300 (434)
Q Consensus 222 ~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~-~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~ 300 (434)
....+.++.+|++.. +++|||++||... ...+.+..+++++++.+.+++|+++..... . ..
T Consensus 222 --~~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~---~-~~---------- 283 (416)
T 1rrv_A 222 --ERPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELV---L-PD---------- 283 (416)
T ss_dssp --CCCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC---C-SC----------
T ss_pred --cCCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCcccc---c-cC----------
Confidence 234578889999875 3699999999864 345778889999999999999987654211 0 11
Q ss_pred CCCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCccc
Q 046033 301 GNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVR 380 (434)
Q Consensus 301 ~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~ 380 (434)
.++|+.+.+|+|+..+|+.+++ +|||||+||+.||+++|+|+|++|...||..||+++++.|+|+.+. ...++
T Consensus 284 -~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~----~~~~~ 356 (416)
T 1rrv_A 284 -DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD----GPTPT 356 (416)
T ss_dssp -CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS----SSCCC
T ss_pred -CCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCC----CCCCC
Confidence 3458999999999999976555 9999999999999999999999999999999999999999999987 35689
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHH-HHHHh
Q 046033 381 KEELARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVV-EKLLQ 428 (434)
Q Consensus 381 ~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~v-e~l~~ 428 (434)
++++.++|+++ + +++|+++++++++.+.+.+ . .+++.+ |.+.+
T Consensus 357 ~~~l~~~i~~l-~---~~~~~~~~~~~~~~~~~~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 357 FESLSAALTTV-L---APETRARAEAVAGMVLTDGAA-AAADLVLAAVGR 401 (416)
T ss_dssp HHHHHHHHHHH-T---SHHHHHHHHHHTTTCCCCHHH-HHHHHHHHHHHC
T ss_pred HHHHHHHHHHh-h---CHHHHHHHHHHHHHHhhcCcH-HHHHHHHHHHhc
Confidence 99999999999 8 7899999999999988765 7 777777 77754
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=2.1e-39 Score=315.46 Aligned_cols=372 Identities=17% Similarity=0.249 Sum_probs=260.7
Q ss_pred CCChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCC---CCCCCccccHHH
Q 046033 1 HGHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNH---TTKNIPRHLIPT 77 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 77 (434)
.||++|+++||++|+++||+|+|++++.+.+.+.+ .|++|+.++.+ ++.. .. .........+..
T Consensus 31 ~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-------~G~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~ 97 (415)
T 3rsc_A 31 HGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-------AGATVVPYQSE-----IIDA-DAAEVFGSDDLGVRPHL 97 (415)
T ss_dssp HHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-------TTCEEEECCCS-----TTTC-CHHHHHHSSSSCHHHHH
T ss_pred ccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-------cCCEEEecccc-----cccc-ccchhhccccHHHHHHH
Confidence 38999999999999999999999999999999988 88999887422 1111 00 000011112222
Q ss_pred -HHHHHHHhHHHHHHHHhhcCCCEEEEc-CCCchHHHHHHHcCCcEEEEecchHHHHHhhh-----ccCCCCCCCCCcCC
Q 046033 78 -LIEAFDAAKPAFCNVLETLKPTLVIYD-LFQPWAAEAAYQHDIAAVAFVTIAAASFSFFL-----QNSSLKFPFPEFDL 150 (434)
Q Consensus 78 -~~~~~~~~~~~~~~~l~~~~pDlVi~d-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~-----~~~~~~~p~~~~~~ 150 (434)
+......+.+.+.+++++++||+||+| ...+++..+|+.+|||++.+.+.......... .......| ...
T Consensus 98 ~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~ 174 (415)
T 3rsc_A 98 MYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDP---LDL 174 (415)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHHHHHHHTCCCG---GGC
T ss_pred HHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCccccccccccccccCCh---hhH
Confidence 344444556788889999999999999 88888999999999999998755431110000 00000000 000
Q ss_pred CCccccccccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCCCCCCCCCchh
Q 046033 151 PESEIQKMTQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEPIYTDNNNDTK 230 (434)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~ 230 (434)
..+ ...+..+.. ..+..... ........+..+....+++++ ....++.++.++||+..+. .+
T Consensus 175 ~~~-~~~~~~~~~--~~g~~~~~--~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~vGp~~~~~--------~~ 236 (415)
T 3rsc_A 175 PVF-RDTLRDLLA--EHGLSRSV--VDCWNHVEQLNLVFVPKAFQI-----AGDTFDDRFVFVGPCFDDR--------RF 236 (415)
T ss_dssp HHH-HHHHHHHHH--HTTCCCCH--HHHHTCCCSEEEESSCTTTST-----TGGGCCTTEEECCCCCCCC--------GG
T ss_pred HHH-HHHHHHHHH--HcCCCCCh--hhhhcCCCCeEEEEcCcccCC-----CcccCCCceEEeCCCCCCc--------cc
Confidence 000 000111111 11111000 011111126677777666654 4455778899999986542 13
Q ss_pred hhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEec
Q 046033 231 IMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQG 310 (434)
Q Consensus 231 ~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~ 310 (434)
..+|....+++++|||++||......+.+..+++++.+.+.++++.++.+... +.+.+ .+.|+.+.+
T Consensus 237 ~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-----~~l~~--------~~~~v~~~~ 303 (415)
T 3rsc_A 237 LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDP-----AALGD--------LPPNVEAHR 303 (415)
T ss_dssp GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCG-----GGGCC--------CCTTEEEES
T ss_pred CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCCh-----HHhcC--------CCCcEEEEe
Confidence 33465555667899999999877677888999999988888888876632111 11111 345899999
Q ss_pred ccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHH
Q 046033 311 WAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQ 390 (434)
Q Consensus 311 ~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ 390 (434)
|+|+..+|+++++ +|||||+||+.||+++|+|+|++|...||..||+++++.|+|+.+. .++++++.|.++|.+
T Consensus 304 ~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~----~~~~~~~~l~~~i~~ 377 (415)
T 3rsc_A 304 WVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLP----GEKADGDTLLAAVGA 377 (415)
T ss_dssp CCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECC----GGGCCHHHHHHHHHH
T ss_pred cCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcc----cCCCCHHHHHHHHHH
Confidence 9999999998776 9999999999999999999999999999999999999999999997 356899999999999
Q ss_pred HhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHh
Q 046033 391 VVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 428 (434)
Q Consensus 391 ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~ 428 (434)
+|+ +++++++++++++.+.+.+ .+++++.++++++
T Consensus 378 ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 378 VAA---DPALLARVEAMRGHVRRAGGAARAADAVEAYLA 413 (415)
T ss_dssp HHT---CHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHc---CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999 7899999999999998877 7788888887754
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.8e-39 Score=314.36 Aligned_cols=369 Identities=16% Similarity=0.152 Sum_probs=251.2
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHH
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEA 81 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (434)
||++|+++||++|+++||+|+|++++.+.+.+.+ .|++|+.++.+ ...+ .. ..... .......+...
T Consensus 12 Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~-------~g~~~~~l~~~--~~~~-~~--~~~~~-~~~~~~~~~~~ 78 (404)
T 3h4t_A 12 GDTEPLVALAARLRELGADARMCLPPDYVERCAE-------VGVPMVPVGRA--VRAG-AR--EPGEL-PPGAAEVVTEV 78 (404)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH-------TTCCEEECSSC--SSGG-GS--CTTCC-CTTCGGGHHHH
T ss_pred ccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-------cCCceeecCCC--HHHH-hc--cccCC-HHHHHHHHHHH
Confidence 8999999999999999999999999999999998 89999888432 1111 00 00000 11222333344
Q ss_pred HHHhHHHHHHHHhhcCCCEEEEcCCCchH---HHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCcccccc
Q 046033 82 FDAAKPAFCNVLETLKPTLVIYDLFQPWA---AEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQKM 158 (434)
Q Consensus 82 ~~~~~~~~~~~l~~~~pDlVi~d~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 158 (434)
.....+.+.++++ +||+||+|...+.+ ..+|+++|||++.+...+.............. ............+
T Consensus 79 ~~~~~~~l~~~~~--~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 153 (404)
T 3h4t_A 79 VAEWFDKVPAAIE--GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDM---YNQGADRLFGDAV 153 (404)
T ss_dssp HHHHHHHHHHHHT--TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHH---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc--CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHH---HHHHHHHHhHHHH
Confidence 4444444444443 79999998443434 78999999999998877653111000000000 0000000000000
Q ss_pred ccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCCCCCCCCCchhhhhhhcCC
Q 046033 159 TQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEPIYTDNNNDTKIMDWLSRK 238 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~l~~~ 238 (434)
+.+.. ..+............ .+..+.+..+.+.+ .+.+++++.++|++..+ .....++++.+|++..
T Consensus 154 ~~~~~--~lgl~~~~~~~~~~~--~~~~l~~~~~~l~p------~~~~~~~~~~~G~~~~~---~~~~~~~~l~~~l~~~ 220 (404)
T 3h4t_A 154 NSHRA--SIGLPPVEHLYDYGY--TDQPWLAADPVLSP------LRPTDLGTVQTGAWILP---DQRPLSAELEGFLRAG 220 (404)
T ss_dssp HHHHH--HTTCCCCCCHHHHHH--CSSCEECSCTTTSC------CCTTCCSCCBCCCCCCC---CCCCCCHHHHHHHHTS
T ss_pred HHHHH--HcCCCCCcchhhccc--cCCeEEeeCcceeC------CCCCCCCeEEeCccccC---CCCCCCHHHHHHHhcC
Confidence 00000 011100000011000 22234566555544 22366789999987654 2334678999999853
Q ss_pred CCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHh
Q 046033 239 EPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKIL 318 (434)
Q Consensus 239 ~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il 318 (434)
+++|||++||+.. ..+.+..+++++++.+.+++|+++..... ..+ ..+|+.+.+|+|+..+|
T Consensus 221 --~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~-------~~~--------~~~~v~~~~~~~~~~ll 282 (404)
T 3h4t_A 221 --SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLG-------RID--------EGDDCLVVGEVNHQVLF 282 (404)
T ss_dssp --SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCC-------CSS--------CCTTEEEESSCCHHHHG
T ss_pred --CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccc-------ccc--------CCCCEEEecCCCHHHHH
Confidence 5699999999876 66788889999999999999987653211 111 45689999999999999
Q ss_pred cccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhcccchH
Q 046033 319 GHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVEQEEGQ 398 (434)
Q Consensus 319 ~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~~~~~ 398 (434)
+++++ +|||||+||+.||+++|+|+|++|...||+.||+++++.|+|+.+. ...++++.|.++|+++++ +
T Consensus 283 ~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~----~~~~~~~~l~~ai~~ll~----~ 352 (404)
T 3h4t_A 283 GRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHD----GPTPTVESLSAALATALT----P 352 (404)
T ss_dssp GGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS----SSSCCHHHHHHHHHHHTS----H
T ss_pred hhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccC----cCCCCHHHHHHHHHHHhC----H
Confidence 87665 9999999999999999999999999999999999999999999997 456899999999999998 6
Q ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHhh
Q 046033 399 QIKRKAKELSESIKKKGDDEEINVVEKLLQL 429 (434)
Q Consensus 399 ~~~~~a~~l~~~~~~~~~~~~~~~ve~l~~~ 429 (434)
+|+++++++++.+.+.+.+.+++.++++.+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 383 (404)
T 3h4t_A 353 GIRARAAAVAGTIRTDGTTVAAKLLLEAISR 383 (404)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Confidence 8999999999999883377888888887653
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.1e-38 Score=308.92 Aligned_cols=375 Identities=18% Similarity=0.269 Sum_probs=259.2
Q ss_pred CCChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHH-HH
Q 046033 1 HGHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPT-LI 79 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 79 (434)
.||++|+++||++|+++||+|+|++++.+.+.+.. .|++|+.++.+ ....... ...........+.. +.
T Consensus 15 ~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-------~G~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~ 84 (402)
T 3ia7_A 15 HGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA-------AGAEVVLYKSE--FDTFHVP-EVVKQEDAETQLHLVYV 84 (402)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH-------TTCEEEECCCG--GGTSSSS-SSSCCTTHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH-------cCCEEEecccc--ccccccc-ccccccchHHHHHHHHH
Confidence 48999999999999999999999999988888888 88999887432 1111100 00111111122222 33
Q ss_pred HHHHHhHHHHHHHHhhcCCCEEEEc-CCCchHHHHHHHcCCcEEEEecchHHHHHhhh-----ccCCCCCCCCCcCCCCc
Q 046033 80 EAFDAAKPAFCNVLETLKPTLVIYD-LFQPWAAEAAYQHDIAAVAFVTIAAASFSFFL-----QNSSLKFPFPEFDLPES 153 (434)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~pDlVi~d-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~-----~~~~~~~p~~~~~~~~~ 153 (434)
.......+.+.+++++++||+||+| ...+++..+|+.+|||++.+.+.......... .......|. ....+
T Consensus 85 ~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 161 (402)
T 3ia7_A 85 RENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNGQRHPA---DVEAV 161 (402)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHHHTCCCGG---GSHHH
T ss_pred HHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccccccccccccccChh---hHHHH
Confidence 4444556778889999999999999 88889999999999999998755432111000 000000000 00000
Q ss_pred cccccccccccccCCchh-HHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCCCCCCCCCchhhh
Q 046033 154 EIQKMTQFKHRIVNGTEN-RDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEPIYTDNNNDTKIM 232 (434)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~ 232 (434)
...+..+.. ..+... ...+ .....+..+....+++++ ....++.++.++||+..... +..
T Consensus 162 -~~~~~~~~~--~~g~~~~~~~~---~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~vGp~~~~~~--------~~~ 222 (402)
T 3ia7_A 162 -HSVLVDLLG--KYGVDTPVKEY---WDEIEGLTIVFLPKSFQP-----FAETFDERFAFVGPTLTGRD--------GQP 222 (402)
T ss_dssp -HHHHHHHHH--TTTCCSCHHHH---HTCCCSCEEESSCGGGST-----TGGGCCTTEEECCCCCCC------------C
T ss_pred -HHHHHHHHH--HcCCCCChhhh---hcCCCCeEEEEcChHhCC-----ccccCCCCeEEeCCCCCCcc--------cCC
Confidence 000111111 111111 1111 111125566666555554 34456788999999865421 223
Q ss_pred hhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEeccc
Q 046033 233 DWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWA 312 (434)
Q Consensus 233 ~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~ 312 (434)
.|+...+++++|||++||......+.+..+++++++.+..+++.++.+... +.+.+ ...|+.+.+|+
T Consensus 223 ~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~--------~~~~v~~~~~~ 289 (402)
T 3ia7_A 223 GWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDP-----AVLGP--------LPPNVEAHQWI 289 (402)
T ss_dssp CCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCG-----GGGCS--------CCTTEEEESCC
T ss_pred CCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCCh-----hhhCC--------CCCcEEEecCC
Confidence 355555667899999999987777889999999988887887776642110 11111 34689999999
Q ss_pred CHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccC-CCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHH
Q 046033 313 PQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPM-VLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQV 391 (434)
Q Consensus 313 p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~-~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~l 391 (434)
|+..+|+++++ +|||||++|+.||+++|+|+|++|. ..||..||+++++.|+|+.+.. ++++++.+.++|.++
T Consensus 290 ~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~----~~~~~~~l~~~~~~l 363 (402)
T 3ia7_A 290 PFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRP----DQLEPASIREAVERL 363 (402)
T ss_dssp CHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCG----GGCSHHHHHHHHHHH
T ss_pred CHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccC----CCCCHHHHHHHHHHH
Confidence 99999998776 9999999999999999999999999 9999999999999999999973 557999999999999
Q ss_pred hcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHhh
Q 046033 392 VEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQL 429 (434)
Q Consensus 392 l~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~~ 429 (434)
|+ +++++++++++++.+.+.+ ..++++.++++.+.
T Consensus 364 l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 364 AA---DSAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HH---CHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred Hc---CHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 99 7899999999999998877 77888888887653
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.7e-36 Score=291.90 Aligned_cols=354 Identities=14% Similarity=0.142 Sum_probs=246.5
Q ss_pred CCChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCC-CC--CCCccccHHH
Q 046033 1 HGHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNH-TT--KNIPRHLIPT 77 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~ 77 (434)
.||++|+++||++|+++||+|+|++++...+.+.. .|++++.++.. ...+....... .. ..........
T Consensus 11 ~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-------~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (384)
T 2p6p_A 11 PATVFALAPLATAARNAGHQVVMAANQDMGPVVTG-------VGLPAVATTDL-PIRHFITTDREGRPEAIPSDPVAQAR 82 (384)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-------TTCCEEESCSS-CHHHHHHBCTTSCBCCCCCSHHHHHH
T ss_pred cchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-------CCCEEEEeCCc-chHHHHhhhcccCccccCcchHHHHH
Confidence 38999999999999999999999999887777777 78999877322 00000000000 00 0000011111
Q ss_pred -----HHHHHHHhHHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCC
Q 046033 78 -----LIEAFDAAKPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPE 152 (434)
Q Consensus 78 -----~~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 152 (434)
+..........+.+++++++||+||+|.+.+++..+|+.+|||++.+...+... .. +
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~---------~~-------~-- 144 (384)
T 2p6p_A 83 FTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA---------DG-------I-- 144 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC---------TT-------T--
T ss_pred HHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc---------ch-------h--
Confidence 122223346677788888999999999777888999999999999886432100 00 0
Q ss_pred ccccccccccccccCCchhHHHHHHhhh--c--CCcEEEEcCCchhcHHHHHHHhhhcC-CceeeeCCCCCCCCCCCCCC
Q 046033 153 SEIQKMTQFKHRIVNGTENRDRFLKAID--L--SCKLVLVKTSREIESKDLHYLSYITK-KETIPVGPLVQEPIYTDNNN 227 (434)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vGpl~~~~~~~~~~~ 227 (434)
. ..+ .....++...+. . .++.+++++.+.++++ . .++ .++.+++. . .
T Consensus 145 -~----~~~-------~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~-~~~~~~~~~~~~---~-------~ 196 (384)
T 2p6p_A 145 -H----PGA-------DAELRPELSELGLERLPAPDLFIDICPPSLRPA-----N-AAPARMMRHVAT---S-------R 196 (384)
T ss_dssp -H----HHH-------HHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-----T-SCCCEECCCCCC---C-------C
T ss_pred -h----HHH-------HHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-----C-CCCCCceEecCC---C-------C
Confidence 0 000 001111111111 0 1467888888777652 1 122 23444421 1 1
Q ss_pred chhhhhhhcCCCCCceEEEEecCcccC-----CHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCC
Q 046033 228 DTKIMDWLSRKEPSSVVYVSFGSEYFL-----SKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGN 302 (434)
Q Consensus 228 ~~~~~~~l~~~~~~~vV~vs~Gs~~~~-----~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 302 (434)
+.++.+|++..+++++|||++||.... ..+.+..+++++.+.+.+++|+++... . +.+.. .
T Consensus 197 ~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~------~----~~l~~----~ 262 (384)
T 2p6p_A 197 QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTV------A----EALRA----E 262 (384)
T ss_dssp CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHH------H----HHHHH----H
T ss_pred CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCC------H----HhhCC----C
Confidence 234556887655567999999998764 346788899999888889999865310 0 11111 2
Q ss_pred CCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHH
Q 046033 303 NKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKE 382 (434)
Q Consensus 303 ~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~ 382 (434)
+.|+.+ +|+|+..+|+++++ +|||||+||+.||+++|+|+|++|...||..||.++++.|+|+.+. ...++++
T Consensus 263 ~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~----~~~~~~~ 335 (384)
T 2p6p_A 263 VPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALL----PGEDSTE 335 (384)
T ss_dssp CTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECC----TTCCCHH
T ss_pred CCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecC----cCCCCHH
Confidence 458889 99999999987665 9999999999999999999999999999999999999999999987 3557999
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHhhhcC
Q 046033 383 ELARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQLVKV 432 (434)
Q Consensus 383 ~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~~~~~ 432 (434)
++.++|+++|+ +++++++++++++.+++.+ .+++++.++.+++.+.|
T Consensus 336 ~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 383 (384)
T 2p6p_A 336 AIADSCQELQA---KDTYARRAQDLSREISGMPLPATVVTALEQLAHHHHH 383 (384)
T ss_dssp HHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHc---CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhhhccC
Confidence 99999999999 7899999999999999977 88899999998876543
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.3e-36 Score=297.16 Aligned_cols=373 Identities=18% Similarity=0.267 Sum_probs=247.8
Q ss_pred CCChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCC---CCCccccHHH
Q 046033 1 HGHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTT---KNIPRHLIPT 77 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 77 (434)
.||++|+++||++|+++||+|++++++...+.+.+ .|++++.++. .++.. .... .......+..
T Consensus 18 ~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~-------~g~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~ 84 (430)
T 2iyf_A 18 HGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA-------TGPRPVLYHS-----TLPGP-DADPEAWGSTLLDNVEP 84 (430)
T ss_dssp HHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT-------TSCEEEECCC-----CSCCT-TSCGGGGCSSHHHHHHH
T ss_pred CccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh-------CCCEEEEcCC-----cCccc-cccccccchhhHHHHHH
Confidence 38999999999999999999999999988777777 7899977632 12211 1100 0000111222
Q ss_pred HHHHHHHhHHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCcc--c
Q 046033 78 LIEAFDAAKPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESE--I 155 (434)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~ 155 (434)
+..........+.+++++.+||+||+|.+.+++..+|+.+|||++.+++...........+..+..+.. ...+... .
T Consensus 85 ~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 163 (430)
T 2iyf_A 85 FLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWREP-RQTERGRAYY 163 (430)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHHHH-HHSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhhhh-ccchHHHHHH
Confidence 223334456778889999999999999777789999999999999988665311000000000000000 0000000 0
Q ss_pred cccccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCc-eeeeCCCCCCCCCCCCCCchhhhhh
Q 046033 156 QKMTQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKE-TIPVGPLVQEPIYTDNNNDTKIMDW 234 (434)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vGpl~~~~~~~~~~~~~~~~~~ 234 (434)
..+..++. ..+.+. ........ ++.+++++.+++++. ...++++ ++++||+..... +..+|
T Consensus 164 ~~~~~~~~--~~g~~~--~~~~~~~~-~~~~l~~~~~~~~~~-----~~~~~~~~v~~vG~~~~~~~--------~~~~~ 225 (430)
T 2iyf_A 164 ARFEAWLK--ENGITE--HPDTFASH-PPRSLVLIPKALQPH-----ADRVDEDVYTFVGACQGDRA--------EEGGW 225 (430)
T ss_dssp HHHHHHHH--HTTCCS--CHHHHHHC-CSSEEECSCGGGSTT-----GGGSCTTTEEECCCCC-------------CCCC
T ss_pred HHHHHHHH--HhCCCC--CHHHHhcC-CCcEEEeCcHHhCCC-----cccCCCccEEEeCCcCCCCC--------CCCCC
Confidence 00111111 000000 00111113 677899998887762 2346667 999998643211 11235
Q ss_pred hcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccC
Q 046033 235 LSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLS-EVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAP 313 (434)
Q Consensus 235 l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p 313 (434)
.+..+++++|||++||......+.+..+++++++. +.+++|.++.+... +.+.+ ...|+.+.+|+|
T Consensus 226 ~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~-----~~l~~--------~~~~v~~~~~~~ 292 (430)
T 2iyf_A 226 QRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP-----AELGE--------LPDNVEVHDWVP 292 (430)
T ss_dssp CCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG-----GGGCS--------CCTTEEEESSCC
T ss_pred ccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh-----HHhcc--------CCCCeEEEecCC
Confidence 55445578999999998844567888899999875 77787777643211 11111 345899999999
Q ss_pred HHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhc
Q 046033 314 QAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVE 393 (434)
Q Consensus 314 ~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~ 393 (434)
+..+|+++++ +|||||++|+.||+++|+|+|++|..+||..|++++++.|+|+.+. .+.++++++.++|.++++
T Consensus 293 ~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~----~~~~~~~~l~~~i~~ll~ 366 (430)
T 2iyf_A 293 QLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLA----TEEATADLLRETALALVD 366 (430)
T ss_dssp HHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECC----CC-CCHHHHHHHHHHHHH
T ss_pred HHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcC----CCCCCHHHHHHHHHHHHc
Confidence 9999998777 9999999999999999999999999999999999999999999987 355789999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHH
Q 046033 394 QEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLL 427 (434)
Q Consensus 394 ~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~ 427 (434)
++++++++.++++.+.+.+ ...+++.++++.
T Consensus 367 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 398 (430)
T 2iyf_A 367 ---DPEVARRLRRIQAEMAQEGGTRRAADLIEAEL 398 (430)
T ss_dssp ---CHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTS
T ss_pred ---CHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHh
Confidence 7889999999999887755 666666666553
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.2e-36 Score=294.26 Aligned_cols=366 Identities=15% Similarity=0.181 Sum_probs=237.1
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCC------CCC----c
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTT------KNI----P 71 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~------~~~----~ 71 (434)
||++|+++||++|+++||+|+|++++.+.+.++. .|++|++++......++........ .+. .
T Consensus 32 GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~-------~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (441)
T 2yjn_A 32 SHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA-------AGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSLDFSERDP 104 (441)
T ss_dssp HHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT-------TTCCEEECSCCCCHHHHHHHTTHHHHHHHTTCCCTTCCG
T ss_pred chHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh-------CCCceeecCCccchHHHhhhhhcccccccccccccccCc
Confidence 8999999999999999999999999998888888 8899988742200001100000000 000 0
Q ss_pred c----ccH----HHHHHHHH-----H-hHHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHh---
Q 046033 72 R----HLI----PTLIEAFD-----A-AKPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSF--- 134 (434)
Q Consensus 72 ~----~~~----~~~~~~~~-----~-~~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~--- 134 (434)
. ..+ ..+...+. . ....+.+++++++||+||+|...+++..+|+.+|||++.+...+......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~~~~~~~~~~~~ 184 (441)
T 2yjn_A 105 ATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPHARLLWGPDITTRARQN 184 (441)
T ss_dssp GGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCEEEECSSCCHHHHHHHH
T ss_pred chhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCEEEEecCCCcchhhhhh
Confidence 0 011 11111111 1 45667777888999999999777889999999999999997554321110
Q ss_pred hhccCCCCCCCCCcCCCCccccccccccccccCCchhHHHHHHhhhc--------CCcEEEEcCCchhcHHHHHHHhhhc
Q 046033 135 FLQNSSLKFPFPEFDLPESEIQKMTQFKHRIVNGTENRDRFLKAIDL--------SCKLVLVKTSREIESKDLHYLSYIT 206 (434)
Q Consensus 135 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (434)
+.... ...|.. ... .. ....+.++...+.. ..+..+..+.+.++++ ..+
T Consensus 185 ~~~~~-~~~~~~-----~~~----~~-------~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~------~~~ 241 (441)
T 2yjn_A 185 FLGLL-PDQPEE-----HRE----DP-------LAEWLTWTLEKYGGPAFDEEVVVGQWTIDPAPAAIRLD------TGL 241 (441)
T ss_dssp HHHHG-GGSCTT-----TCC----CH-------HHHHHHHHHHHTTCCCCCGGGTSCSSEEECSCGGGSCC------CCC
T ss_pred hhhhc-cccccc-----ccc----ch-------HHHHHHHHHHHcCCCCCCccccCCCeEEEecCccccCC------CCC
Confidence 00000 000000 000 00 00111111111100 0233444444433320 112
Q ss_pred CCceeeeCCCCCCCCCCCCCCchhhhhhhcCCCCCceEEEEecCcccC---CHHHHHHHHHHHhhCCCcEEEEEecCCCC
Q 046033 207 KKETIPVGPLVQEPIYTDNNNDTKIMDWLSRKEPSSVVYVSFGSEYFL---SKEEMNELASGLLLSEVSFIWVVRFHSEG 283 (434)
Q Consensus 207 ~~~~~~vGpl~~~~~~~~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~~---~~~~~~~i~~~l~~~~~~~i~~~~~~~~~ 283 (434)
+. ..+++.... .+.++.+|++..+++++|||++||.... ..+.+..+++++.+.+.+++|+++....
T Consensus 242 ~~--~~~~~~~~~-------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~- 311 (441)
T 2yjn_A 242 KT--VGMRYVDYN-------GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQL- 311 (441)
T ss_dssp CE--EECCCCCCC-------SSCCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTT-
T ss_pred CC--CceeeeCCC-------CCcccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcch-
Confidence 11 122222211 1234567888766678999999998753 2356777888998888898888764311
Q ss_pred CccccccCchhHHHhhcCCCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHh
Q 046033 284 NFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD 363 (434)
Q Consensus 284 ~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~ 363 (434)
+.+.+ .+.|+.+.+|+|+..+|+.+++ +|||||+||+.||+++|+|+|++|...||..||+++++
T Consensus 312 -----~~l~~--------~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~ 376 (441)
T 2yjn_A 312 -----EGVAN--------IPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE 376 (441)
T ss_dssp -----SSCSS--------CCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH
T ss_pred -----hhhcc--------CCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH
Confidence 11111 3458999999999999976655 99999999999999999999999999999999999999
Q ss_pred hceeeeecccccCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHhh
Q 046033 364 IGVGLEVPRDEINQRVRKEELARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQL 429 (434)
Q Consensus 364 ~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~~ 429 (434)
.|+|+.+. ...+++++|.++|.++|+ +++++++++++++.+.+.+ ..++++.++++.+.
T Consensus 377 ~g~g~~~~----~~~~~~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 436 (441)
T 2yjn_A 377 FGAGIALP----VPELTPDQLRESVKRVLD---DPAHRAGAARMRDDMLAEPSPAEVVGICEELAAG 436 (441)
T ss_dssp HTSEEECC----TTTCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHC
T ss_pred cCCEEEcc----cccCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 99999987 456899999999999999 7899999999999999877 88888888887653
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.8e-35 Score=285.99 Aligned_cols=350 Identities=15% Similarity=0.188 Sum_probs=225.2
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCC-CCCCCCCc-------cc
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPY-NHTTKNIP-------RH 73 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~-~~~~~~~~-------~~ 73 (434)
||++|+++||++|+++||+|++++++...+.+.. .|++++.++.+.....+.... ........ ..
T Consensus 27 gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-------~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (398)
T 4fzr_A 27 GFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG-------AGLPFAPTCPSLDMPEVLSWDREGNRTTMPREEKPLLEH 99 (398)
T ss_dssp HHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH-------TTCCEEEEESSCCHHHHHSBCTTSCBCCCCSSHHHHHHH
T ss_pred chHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh-------CCCeeEecCCccchHhhhhhhccCcccccccchhhHHHH
Confidence 8999999999999999999999999988888888 889998884210000000000 00000000 01
Q ss_pred cHHHHHHHHHHhHHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCc
Q 046033 74 LIPTLIEAFDAAKPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPES 153 (434)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 153 (434)
....+......+...+.+++++++||+|++|...+++..+|+.+|||++.+........... ..
T Consensus 100 ~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~-~~--------------- 163 (398)
T 4fzr_A 100 IGRGYGRLVLRMRDEALALAERWKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK-SA--------------- 163 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH-HH---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh-HH---------------
Confidence 11222333344566788889999999999998778899999999999998775532111000 00
Q ss_pred cccccccccccccCCchhHHHHHHhhh----cCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCCCCCCCCCch
Q 046033 154 EIQKMTQFKHRIVNGTENRDRFLKAID----LSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEPIYTDNNNDT 229 (434)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~ 229 (434)
+.. .+......+. ...+..+....+.+.... ......+.++++.. ...
T Consensus 164 ----~~~----------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---------~~~ 215 (398)
T 4fzr_A 164 ----GVG----------ELAPELAELGLTDFPDPLLSIDVCPPSMEAQP-----KPGTTKMRYVPYNG---------RND 215 (398)
T ss_dssp ----HHH----------HTHHHHHTTTCSSCCCCSEEEECSCGGGC---------CCCEECCCCCCCC---------SSC
T ss_pred ----HHH----------HHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC-----CCCCCCeeeeCCCC---------CCC
Confidence 000 0000111000 013445555444444311 00111122222110 123
Q ss_pred hhhhhhcCCCCCceEEEEecCcccC--------CHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcC
Q 046033 230 KIMDWLSRKEPSSVVYVSFGSEYFL--------SKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQG 301 (434)
Q Consensus 230 ~~~~~l~~~~~~~vV~vs~Gs~~~~--------~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~ 301 (434)
++.+|+...+++++|||++|+.... ..+.+..+++++.+.+.+++|+.+.... +.+.+
T Consensus 216 ~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~------~~l~~-------- 281 (398)
T 4fzr_A 216 QVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLA------QTLQP-------- 281 (398)
T ss_dssp CCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC----------------------
T ss_pred CCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcch------hhhcc--------
Confidence 4456776656678999999998643 2355788899998888888887654311 11111
Q ss_pred CCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccH
Q 046033 302 NNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRK 381 (434)
Q Consensus 302 ~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~ 381 (434)
.++|+.+.+|+|+..+|+++++ +|||||.||+.||+++|+|+|++|...||..|+.++++.|+|+.+. .+.+++
T Consensus 282 ~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~----~~~~~~ 355 (398)
T 4fzr_A 282 LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVP----WEQAGV 355 (398)
T ss_dssp CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC----------
T ss_pred CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecC----cccCCH
Confidence 4568999999999999998766 9999999999999999999999999999999999999999999997 455789
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHH
Q 046033 382 EELARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEK 425 (434)
Q Consensus 382 ~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~ 425 (434)
+.|.++|.++|+ +++++++++++++.+.+.. ..++++.+++
T Consensus 356 ~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 356 ESVLAACARIRD---DSSYVGNARRLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp -CHHHHHHHHHH---CTHHHHHHHHHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHHHHh---CHHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 999999999999 7999999999999998877 7777766653
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=3.1e-34 Score=277.29 Aligned_cols=346 Identities=14% Similarity=0.166 Sum_probs=236.5
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCC-------------C-CCC
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPY-------------N-HTT 67 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~-------------~-~~~ 67 (434)
||++|+++||++|+++||+|+|+++ .+.+.+.. .|++++.++.+ ..+.... . ...
T Consensus 32 Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~-------~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (398)
T 3oti_A 32 GHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA-------AGLEVVDVAPD---YSAVKVFEQVAKDNPRFAETVATRP 100 (398)
T ss_dssp HHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT-------TTCEEEESSTT---CCHHHHHHHHHHHCHHHHHTGGGSC
T ss_pred chHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh-------CCCeeEecCCc---cCHHHHhhhcccCCccccccccCCh
Confidence 8999999999999999999999999 88888888 89999887422 0000000 0 000
Q ss_pred CCCccccHHHHHHHHHHhHHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCC
Q 046033 68 KNIPRHLIPTLIEAFDAAKPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPE 147 (434)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~ 147 (434)
..........+......+...+.+++++++||+||+|...+++..+|+.+|||++.+.......... ..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~--------- 170 (398)
T 3oti_A 101 AIDLEEWGVQIAAVNRPLVDGTMALVDDYRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTRGM-HRS--------- 170 (398)
T ss_dssp CCSGGGGHHHHHHHHGGGHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCTTH-HHH---------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCccch-hhH---------
Confidence 1111234444555566677889999999999999999887889999999999999876432100000 000
Q ss_pred cCCCCccccccccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCCCCCCCCC
Q 046033 148 FDLPESEIQKMTQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEPIYTDNNN 227 (434)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~ 227 (434)
....+ .....++...... .+..+....+.+.. ........+.++ +. ..
T Consensus 171 ----------~~~~l------~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~-------~~ 218 (398)
T 3oti_A 171 ----------IASFL------TDLMDKHQVSLPE-PVATIESFPPSLLL-----EAEPEGWFMRWV---PY-------GG 218 (398)
T ss_dssp ----------HHTTC------HHHHHHTTCCCCC-CSEEECSSCGGGGT-----TSCCCSBCCCCC---CC-------CC
T ss_pred ----------HHHHH------HHHHHHcCCCCCC-CCeEEEeCCHHHCC-----CCCCCCCCcccc---CC-------CC
Confidence 00000 0111111100011 23344443333322 100000011111 10 11
Q ss_pred chhhhhhhcCCCCCceEEEEecCcccC--CHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCc
Q 046033 228 DTKIMDWLSRKEPSSVVYVSFGSEYFL--SKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKG 305 (434)
Q Consensus 228 ~~~~~~~l~~~~~~~vV~vs~Gs~~~~--~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 305 (434)
+..+.+|+...+++++|||++||.... ..+.+..+++++++.+.+++|++++... +.+.+ .+.|
T Consensus 219 ~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~------~~l~~--------~~~~ 284 (398)
T 3oti_A 219 GAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDI------SPLGT--------LPRN 284 (398)
T ss_dssp CEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCC------GGGCS--------CCTT
T ss_pred CcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcCh------hhhcc--------CCCc
Confidence 234455776666678999999998542 4566888999998888888888764321 11111 4568
Q ss_pred EEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHH--HHHHhhceeeeecccccCCcccHHH
Q 046033 306 MVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNA--KMVADIGVGLEVPRDEINQRVRKEE 383 (434)
Q Consensus 306 v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na--~~~~~~G~g~~~~~~~~~~~~~~~~ 383 (434)
+.+.+|+|+..+|+++++ +|||||.||+.||+++|+|+|++|...||..|| .++++.|+|+.+.. .+.+++.
T Consensus 285 v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~----~~~~~~~ 358 (398)
T 3oti_A 285 VRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTS----DKVDADL 358 (398)
T ss_dssp EEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCG----GGCCHHH
T ss_pred EEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCC----CCCCHHH
Confidence 999999999999998666 999999999999999999999999999999999 99999999999973 4567777
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHH
Q 046033 384 LARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLL 427 (434)
Q Consensus 384 l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~ 427 (434)
+. ++|+ +++++++++++++.+.+.. ..++++.++++.
T Consensus 359 l~----~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 359 LR----RLIG---DESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp HH----HHHH---CHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HH----HHHc---CHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 76 8888 7999999999999999877 888888888875
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=5.5e-34 Score=274.95 Aligned_cols=353 Identities=14% Similarity=0.159 Sum_probs=234.2
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEe-cCCCCCCCC-----CCCCCCCC-CCCcccc
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDL-QLPCTFPEL-----HDPYNHTT-KNIPRHL 74 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~-~~~~~~~~~-----~~~~~~~~-~~~~~~~ 74 (434)
||++|++.||++|+++||+|+|++++...+.+.. .|++++.+ +.+...... +.. .... .......
T Consensus 13 gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 84 (391)
T 3tsa_A 13 THLMAMVPLCWALQASGHEVLIAAPPELQATAHG-------AGLTTAGIRGNDRTGDTGGTTQLRFP-NPAFGQRDTEAG 84 (391)
T ss_dssp HHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH-------BTCEEEEC--------------CCSC-CGGGGCTTSHHH
T ss_pred chhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh-------CCCceeeecCCccchhhhhhhccccc-ccccccccchhH
Confidence 8999999999999999999999999888888888 88999777 322000000 000 0000 0000112
Q ss_pred HHHHHHHHHHh-------HHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCC
Q 046033 75 IPTLIEAFDAA-------KPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPE 147 (434)
Q Consensus 75 ~~~~~~~~~~~-------~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~ 147 (434)
...+......+ ...+.+++++++||+|++|...+++..+|+.+|||++.+.............+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~~~~~--------- 155 (391)
T 3tsa_A 85 RQLWEQTASNVAQSSLDQLPEYLRLAEAWRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAGPFSDR--------- 155 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTTHHHHH---------
T ss_pred HHHHHHHHHHHhhcchhhHHHHHHHHHhcCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccccccccch---------
Confidence 22233333334 67788899999999999998778889999999999998764431100000000
Q ss_pred cCCCCccccccccccccccCCchhHHHHHHhhhc----CCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCCCCC
Q 046033 148 FDLPESEIQKMTQFKHRIVNGTENRDRFLKAIDL----SCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEPIYT 223 (434)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~~~~ 223 (434)
.. ....+....+.. ..+..+..+.++++. ........+.++ |. .
T Consensus 156 ----------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-p~--~---- 203 (391)
T 3tsa_A 156 ----------AH----------ELLDPVCRHHGLTGLPTPELILDPCPPSLQA-----SDAPQGAPVQYV-PY--N---- 203 (391)
T ss_dssp ----------HH----------HHHHHHHHHTTSSSSCCCSEEEECSCGGGSC-----TTSCCCEECCCC-CC--C----
T ss_pred ----------HH----------HHHHHHHHHcCCCCCCCCceEEEecChhhcC-----CCCCccCCeeee-cC--C----
Confidence 00 001111111111 024455554444332 111111122233 11 0
Q ss_pred CCCCchhhhhhhcCCCCCceEEEEecCccc--CC-HHHHHHHHHHHhhC-CCcEEEEEecCCCCCccccccCchhHHHhh
Q 046033 224 DNNNDTKIMDWLSRKEPSSVVYVSFGSEYF--LS-KEEMNELASGLLLS-EVSFIWVVRFHSEGNFTIEEALPQGFAEEI 299 (434)
Q Consensus 224 ~~~~~~~~~~~l~~~~~~~vV~vs~Gs~~~--~~-~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~ 299 (434)
.+..+.+|+...+++++|||++||... .. .+.+..++++ ++. +.+++|+.++.. .+.+..
T Consensus 204 ---~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~------~~~l~~------ 267 (391)
T 3tsa_A 204 ---GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH------RALLTD------ 267 (391)
T ss_dssp ---CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG------GGGCTT------
T ss_pred ---CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc------hhhccc------
Confidence 122344577766667899999999843 23 6778888888 776 677777765321 111211
Q ss_pred cCCCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcc
Q 046033 300 QGNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRV 379 (434)
Q Consensus 300 ~~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~ 379 (434)
...|+.+.+|+|+..+++.+++ +|||||.||+.||+++|+|+|++|...||..|+.++++.|+|+.+..+ ....
T Consensus 268 --~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~--~~~~ 341 (391)
T 3tsa_A 268 --LPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDE--QAQS 341 (391)
T ss_dssp --CCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSH--HHHT
T ss_pred --CCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcc--cccC
Confidence 4568999999999999976555 999999999999999999999999999999999999999999999720 0347
Q ss_pred cHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHh
Q 046033 380 RKEELARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 428 (434)
Q Consensus 380 ~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~ 428 (434)
+++.|.++|.++|+ +++++++++++++.+.+.+ ..++++.++++..
T Consensus 342 ~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 342 DHEQFTDSIATVLG---DTGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp CHHHHHHHHHHHHT---CTHHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 89999999999999 7899999999999998877 8788888877654
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=5.7e-31 Score=255.60 Aligned_cols=354 Identities=16% Similarity=0.240 Sum_probs=240.0
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCC--------CCCCCC--CCCCc
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELH--------DPYNHT--TKNIP 71 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~--------~~~~~~--~~~~~ 71 (434)
||++|+++||++|+++||+|+|++++...+.+.. .|++++.++.. ...+++ ...... .....
T Consensus 32 Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-------~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (412)
T 3otg_A 32 GHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK-------LGFEPVATGMP-VFDGFLAALRIRFDTDSPEGLTPEQLS 103 (412)
T ss_dssp HHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-------TTCEEEECCCC-HHHHHHHHHHHHHSCSCCTTCCHHHHT
T ss_pred ccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh-------cCCceeecCcc-cccchhhhhhhhhcccCCccCChhHhh
Confidence 8999999999999999999999999887777777 88999887420 000000 000000 00000
Q ss_pred cccHHHHHHH-HHHhHHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCC
Q 046033 72 RHLIPTLIEA-FDAAKPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDL 150 (434)
Q Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 150 (434)
......+... ...+...+.+++++++||+||+|...+++..+|+.+|||+|.+..........
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~---------------- 167 (412)
T 3otg_A 104 ELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDL---------------- 167 (412)
T ss_dssp TSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHH----------------
T ss_pred HHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhh----------------
Confidence 1122222222 33345778889999999999999776778899999999999876543210000
Q ss_pred CCccccccccccccccCCchhHHHHHHh----------hhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCC
Q 046033 151 PESEIQKMTQFKHRIVNGTENRDRFLKA----------IDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEP 220 (434)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~ 220 (434)
...+ .....++... ... ++.++..+.++++.. ...+......+-+....
T Consensus 168 -------~~~~-------~~~~~~~~~~~g~~~~~~~~~~~-~d~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~- 226 (412)
T 3otg_A 168 -------TRSI-------EEEVRGLAQRLGLDLPPGRIDGF-GNPFIDIFPPSLQEP-----EFRARPRRHELRPVPFA- 226 (412)
T ss_dssp -------HHHH-------HHHHHHHHHHTTCCCCSSCCGGG-GCCEEECSCGGGSCH-----HHHTCTTEEECCCCCCC-
T ss_pred -------hHHH-------HHHHHHHHHHcCCCCCcccccCC-CCeEEeeCCHHhcCC-----cccCCCCcceeeccCCC-
Confidence 0000 0001111111 111 455666655554432 11111111111111111
Q ss_pred CCCCCCCchhhhhh-hcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhh
Q 046033 221 IYTDNNNDTKIMDW-LSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEI 299 (434)
Q Consensus 221 ~~~~~~~~~~~~~~-l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~ 299 (434)
...+..+| ....+++++|++++|+......+.+..+++++++.+..++|+++..... +.+.+
T Consensus 227 ------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~-----~~l~~------ 289 (412)
T 3otg_A 227 ------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDV-----SGLGE------ 289 (412)
T ss_dssp ------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCC-----TTCCC------
T ss_pred ------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCCh-----hhhcc------
Confidence 12233445 3333557899999999875567888999999988888888887654211 11111
Q ss_pred cCCCCcEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcc
Q 046033 300 QGNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRV 379 (434)
Q Consensus 300 ~~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~ 379 (434)
..+++.+.+|++...+|+++++ +|+|||++|++||+++|+|+|++|...||..|+..+++.|+|..+.. +.+
T Consensus 290 --~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~----~~~ 361 (412)
T 3otg_A 290 --VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLP----DNI 361 (412)
T ss_dssp --CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCG----GGC
T ss_pred --CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCc----ccC
Confidence 3458999999999999998776 99999999999999999999999999999999999999999999983 457
Q ss_pred cHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHh
Q 046033 380 RKEELARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 428 (434)
Q Consensus 380 ~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~ 428 (434)
+++.|.++|.++|+ ++++++++.+.++.+.+.. .+.+++.++++..
T Consensus 362 ~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 362 SPDSVSGAAKRLLA---EESYRAGARAVAAEIAAMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp CHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC
T ss_pred CHHHHHHHHHHHHh---CHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 99999999999999 7899999999999998866 7778877777754
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-31 Score=255.46 Aligned_cols=326 Identities=17% Similarity=0.179 Sum_probs=200.0
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCch--hhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHH
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINL--QSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLI 79 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~--~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (434)
||++|+++||++|+++||+|+|++++... +.+++ .|++++.++.. +++.. .... .+....
T Consensus 14 GHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~-------~g~~~~~i~~~----~~~~~---~~~~----~~~~~~ 75 (365)
T 3s2u_A 14 GHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK-------AGLPLHLIQVS----GLRGK---GLKS----LVKAPL 75 (365)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG-------GTCCEEECC-------------------------CHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh-------cCCcEEEEECC----CcCCC---CHHH----HHHHHH
Confidence 89999999999999999999999987653 34666 78888877432 33322 1111 111111
Q ss_pred HHHHHhHHHHHHHHhhcCCCEEEEc--CCCchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCccccc
Q 046033 80 EAFDAAKPAFCNVLETLKPTLVIYD--LFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQK 157 (434)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~pDlVi~d--~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 157 (434)
..... .....+++++++||+||++ +.+..+..+|+.+|||++++.++....
T Consensus 76 ~~~~~-~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~~~G-------------------------- 128 (365)
T 3s2u_A 76 ELLKS-LFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVAG-------------------------- 128 (365)
T ss_dssp HHHHH-HHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSSSCC--------------------------
T ss_pred HHHHH-HHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecchhhh--------------------------
Confidence 11111 2345578999999999999 444456788999999999876432111
Q ss_pred cccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCCCCCCCCCchhhhhhhcC
Q 046033 158 MTQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEPIYTDNNNDTKIMDWLSR 237 (434)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~l~~ 237 (434)
..+++...+ ++.+ ..++++..+ ..++..++|+........ .. ..+...
T Consensus 129 -------------~~nr~l~~~---a~~v-~~~~~~~~~---------~~~k~~~~g~pvr~~~~~---~~---~~~~~~ 176 (365)
T 3s2u_A 129 -------------TANRSLAPI---ARRV-CEAFPDTFP---------ASDKRLTTGNPVRGELFL---DA---HARAPL 176 (365)
T ss_dssp -------------HHHHHHGGG---CSEE-EESSTTSSC---------C---CEECCCCCCGGGCC---CT---TSSCCC
T ss_pred -------------hHHHhhccc---ccee-eeccccccc---------CcCcEEEECCCCchhhcc---ch---hhhccc
Confidence 112222221 3333 334433221 234667788665442100 00 111222
Q ss_pred CCCCceEEEEecCcccCCHHHHHHHHHHHhhC----CCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccC
Q 046033 238 KEPSSVVYVSFGSEYFLSKEEMNELASGLLLS----EVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAP 313 (434)
Q Consensus 238 ~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~----~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p 313 (434)
.+++++|+|..||.+... ..+.+.+++... +..+++.++.. . .+...+...+...++.+.+|++
T Consensus 177 ~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~--~--------~~~~~~~~~~~~~~~~v~~f~~ 244 (365)
T 3s2u_A 177 TGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQ--H--------AEITAERYRTVAVEADVAPFIS 244 (365)
T ss_dssp TTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTT--T--------HHHHHHHHHHTTCCCEEESCCS
T ss_pred CCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCcc--c--------cccccceecccccccccccchh
Confidence 344679999999887532 223344555432 33455554422 1 0112222212456788889998
Q ss_pred HH-HHhcccCcceEEeccCcchHHHHHHhCCcEEeccCC----CChhhHHHHHHhhceeeeecccccCCcccHHHHHHHH
Q 046033 314 QA-KILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMV----LDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVF 388 (434)
Q Consensus 314 ~~-~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~----~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v 388 (434)
+. .+|+.+++ +|||+|.+|++|++++|+|+|++|.. .+|..||+.+++.|+|+.++ .++++++.|.++|
T Consensus 245 dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~----~~~~~~~~L~~~i 318 (365)
T 3s2u_A 245 DMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLP----QKSTGAAELAAQL 318 (365)
T ss_dssp CHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECC----TTTCCHHHHHHHH
T ss_pred hhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEee----cCCCCHHHHHHHH
Confidence 86 67887776 99999999999999999999999864 57999999999999999998 4668999999999
Q ss_pred HHHhcccchHHHHHHHHHHHHHHHhcc----hHHHHHHHHHHHh
Q 046033 389 KQVVEQEEGQQIKRKAKELSESIKKKG----DDEEINVVEKLLQ 428 (434)
Q Consensus 389 ~~ll~~~~~~~~~~~a~~l~~~~~~~~----~~~~~~~ve~l~~ 428 (434)
.++|+ |++. .++|++.+++.+ .+.+++.++++.+
T Consensus 319 ~~ll~---d~~~---~~~m~~~a~~~~~~~aa~~ia~~i~~lar 356 (365)
T 3s2u_A 319 SEVLM---HPET---LRSMADQARSLAKPEATRTVVDACLEVAR 356 (365)
T ss_dssp HHHHH---CTHH---HHHHHHHHHHTCCTTHHHHHHHHHHHHC-
T ss_pred HHHHC---CHHH---HHHHHHHHHhcCCccHHHHHHHHHHHHHc
Confidence 99999 5443 344555555544 3445555555544
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=6.6e-27 Score=198.19 Aligned_cols=164 Identities=23% Similarity=0.371 Sum_probs=138.6
Q ss_pred CCchhhhhhhcCCCCCceEEEEecCccc-CCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCC
Q 046033 226 NNDTKIMDWLSRKEPSSVVYVSFGSEYF-LSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNK 304 (434)
Q Consensus 226 ~~~~~~~~~l~~~~~~~vV~vs~Gs~~~-~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 304 (434)
+++.++.+|++..+++++|||++||... ...+.+..+++++++.+.+++|+++.... +. .+.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~------~~-----------~~~ 68 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP------DT-----------LGL 68 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC------TT-----------CCT
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc------cc-----------CCC
Confidence 4788999999887667899999999864 45788889999998888888888754311 11 334
Q ss_pred cEEEecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHH
Q 046033 305 GMVVQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEEL 384 (434)
Q Consensus 305 ~v~~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l 384 (434)
|+.+.+|+|+..++.|+.++++|||||++|++||+++|+|+|++|...||..||.++++.|+|+.+. ...++++++
T Consensus 69 ~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~----~~~~~~~~l 144 (170)
T 2o6l_A 69 NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVD----FNTMSSTDL 144 (170)
T ss_dssp TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECC----TTTCCHHHH
T ss_pred cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEec----cccCCHHHH
Confidence 8999999999999977788889999999999999999999999999999999999999999999997 456899999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHHHHHh
Q 046033 385 ARVFKQVVEQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 385 ~~~v~~ll~~~~~~~~~~~a~~l~~~~~~ 413 (434)
.++|.++++ +++|+++++++++.+++
T Consensus 145 ~~~i~~ll~---~~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 145 LNALKRVIN---DPSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHHHHHHH---CHHHHHHHHHHC-----
T ss_pred HHHHHHHHc---CHHHHHHHHHHHHHhhC
Confidence 999999999 78999999999998764
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.83 E-value=1.3e-18 Score=165.53 Aligned_cols=326 Identities=16% Similarity=0.134 Sum_probs=193.7
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCch--hhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHH
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINL--QSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLI 79 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~--~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (434)
||..+++.||++|.++||+|++++..... +.+.. .|++++.++.+ ++... . ....+....
T Consensus 18 G~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~-------~g~~~~~~~~~----~~~~~------~-~~~~~~~~~ 79 (364)
T 1f0k_A 18 GHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK-------HGIEIDFIRIS----GLRGK------G-IKALIAAPL 79 (364)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG-------GTCEEEECCCC----CCTTC------C-HHHHHTCHH
T ss_pred cchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc-------cCCceEEecCC----ccCcC------c-cHHHHHHHH
Confidence 79999999999999999999999987542 23444 57888777332 22111 0 000000011
Q ss_pred HHHHHhHHHHHHHHhhcCCCEEEEcCC--CchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCccccc
Q 046033 80 EAFDAAKPAFCNVLETLKPTLVIYDLF--QPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQK 157 (434)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~pDlVi~d~~--~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 157 (434)
.. ......+.+++++.+||+|+++.. ...+..+++.+|+|++........
T Consensus 80 ~~-~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~--------------------------- 131 (364)
T 1f0k_A 80 RI-FNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIA--------------------------- 131 (364)
T ss_dssp HH-HHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSC---------------------------
T ss_pred HH-HHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCCC---------------------------
Confidence 11 112345677888899999999843 234567888899999965533110
Q ss_pred cccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCCCCCCCCCchhhhhhhcC
Q 046033 158 MTQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEPIYTDNNNDTKIMDWLSR 237 (434)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~l~~ 237 (434)
....++ +.+.++.+++.+... ++ ++..+|....... ...+ ...+.+..
T Consensus 132 ------------~~~~~~---~~~~~d~v~~~~~~~------------~~-~~~~i~n~v~~~~---~~~~-~~~~~~~~ 179 (364)
T 1f0k_A 132 ------------GLTNKW---LAKIATKVMQAFPGA------------FP-NAEVVGNPVRTDV---LALP-LPQQRLAG 179 (364)
T ss_dssp ------------CHHHHH---HTTTCSEEEESSTTS------------SS-SCEECCCCCCHHH---HTSC-CHHHHHTT
T ss_pred ------------cHHHHH---HHHhCCEEEecChhh------------cC-CceEeCCccchhh---cccc-hhhhhccc
Confidence 001111 111256666544211 22 4556664332210 0001 11122333
Q ss_pred CCCCceEEEEecCcccCCHHHHHHHHHHHhhC--CCcEEEEEecCCCCCccccccCchhHHHhhcC-CCCcEEEecccCH
Q 046033 238 KEPSSVVYVSFGSEYFLSKEEMNELASGLLLS--EVSFIWVVRFHSEGNFTIEEALPQGFAEEIQG-NNKGMVVQGWAPQ 314 (434)
Q Consensus 238 ~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~v~~~~~~p~ 314 (434)
.+++++|+++.|+... .+....+++++... +.++++.++.+. .+.+.+...+ ..+++.+.+|+++
T Consensus 180 ~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~----------~~~l~~~~~~~~~~~v~~~g~~~~ 247 (364)
T 1f0k_A 180 REGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS----------QQSVEQAYAEAGQPQHKVTEFIDD 247 (364)
T ss_dssp CCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC----------HHHHHHHHHHTTCTTSEEESCCSC
T ss_pred CCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch----------HHHHHHHHhhcCCCceEEecchhh
Confidence 3345678887777643 34444455555443 345455554321 0122211100 2247888899844
Q ss_pred -HHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCC---CChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHH
Q 046033 315 -AKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMV---LDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQ 390 (434)
Q Consensus 315 -~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~---~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ 390 (434)
..++..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+.|.|..++. .+++++++.++|.+
T Consensus 248 ~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~----~d~~~~~la~~i~~ 321 (364)
T 1f0k_A 248 MAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQ----PQLSVDAVANTLAG 321 (364)
T ss_dssp HHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCG----GGCCHHHHHHHHHT
T ss_pred HHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEecc----ccCCHHHHHHHHHh
Confidence 577887776 99999999999999999999999987 789999999999999998873 44669999999999
Q ss_pred HhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHh
Q 046033 391 VVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 428 (434)
Q Consensus 391 ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~ 428 (434)
+ + ++.+++..+-+....+.. .+.+++.++++.+
T Consensus 322 l-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 355 (364)
T 1f0k_A 322 W-S----RETLLTMAERARAASIPDATERVANEVSRVAR 355 (364)
T ss_dssp C-C----HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHT
T ss_pred c-C----HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHH
Confidence 9 5 333333333333332323 5566666666554
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.67 E-value=2.7e-15 Score=135.60 Aligned_cols=254 Identities=13% Similarity=0.122 Sum_probs=155.9
Q ss_pred CCChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHH
Q 046033 1 HGHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIE 80 (434)
Q Consensus 1 ~GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (434)
.||++++++||++|+ +|+|+|.....+.+.. .|+..+.+ + . . +
T Consensus 15 ~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~-------~g~~v~~l--~----~---~----------d------- 57 (282)
T 3hbm_A 15 FGHIKRDLVLAKQYS----DVSFACLPLEGSLIDE-------IPYPVYEL--S----S---E----------S------- 57 (282)
T ss_dssp SHHHHHHHHHHTTCS----SEEEEECCCTTCCGGG-------CCSCEEEC--S----S---S----------C-------
T ss_pred ccHHHHHHHHHHHHH----hCEEEEecCcHhHHHH-------CCCeEEEc--C----c---c----------C-------
Confidence 599999999999998 8999998765555555 46666554 1 0 0 0
Q ss_pred HHHHhHHHHHHHHhhcCCCEEEEcCCCchHHHH--HHH-cCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCccccc
Q 046033 81 AFDAAKPAFCNVLETLKPTLVIYDLFQPWAAEA--AYQ-HDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQK 157 (434)
Q Consensus 81 ~~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~~~--A~~-~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 157 (434)
..++.++++..+||+||.|.+....-.. .+. .+++++++--...
T Consensus 58 -----~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~~~---------------------------- 104 (282)
T 3hbm_A 58 -----IYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGVKILSFDDEIK---------------------------- 104 (282)
T ss_dssp -----HHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSSCC----------------------------
T ss_pred -----HHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecCCC----------------------------
Confidence 1234567777899999999666544332 223 5788876531100
Q ss_pred cccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCC-ceeeeCCCCCCCCCCCCCCchhhhhhhc
Q 046033 158 MTQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKK-ETIPVGPLVQEPIYTDNNNDTKIMDWLS 236 (434)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vGpl~~~~~~~~~~~~~~~~~~l~ 236 (434)
... +|.++-.+.. -+.. . .....++ ...+.||=-.. ..++..+.-.
T Consensus 105 ---------------------~~~-~Dllin~~~~-~~~~--~-Y~~~~p~~~~~l~G~~Y~~-------lR~eF~~~~~ 151 (282)
T 3hbm_A 105 ---------------------PHH-CDILLNVNAY-AKAS--D-YEGLVPFKCEVRCGFSYAL-------IREEFYQEAK 151 (282)
T ss_dssp ---------------------CCC-CSEEEECSTT-CCGG--G-GTTTCC-CCEEEESGGGCC-------CCHHHHHHTT
T ss_pred ---------------------ccc-CCEEEeCCcc-cchh--h-ccccCCCCCeEeeCCcccc-------cCHHHHHhhh
Confidence 001 4444332221 1110 0 0111222 24467772111 2223222111
Q ss_pred -CCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHH
Q 046033 237 -RKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQA 315 (434)
Q Consensus 237 -~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~ 315 (434)
..++.+.|+|++|+.... .....+++++.+.. ++.++.+.+.. ..+.+..... ...|+.+..|+++.
T Consensus 152 ~~r~~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~--------~~~~l~~~~~-~~~~v~v~~~~~~m 219 (282)
T 3hbm_A 152 ENRKKKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP--------NLKKLQKFAK-LHNNIRLFIDHENI 219 (282)
T ss_dssp CCCCCCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT--------THHHHHHHHH-TCSSEEEEESCSCH
T ss_pred hccccCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch--------HHHHHHHHHh-hCCCEEEEeCHHHH
Confidence 122356899999975432 35556777776544 45555543311 1122222111 33589999999887
Q ss_pred -HHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecc
Q 046033 316 -KILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPR 372 (434)
Q Consensus 316 -~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~ 372 (434)
.+|..+++ +||+|| +|++|+++.|+|+|++|...+|..||+.+++.|++..+..
T Consensus 220 ~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~G~~~~~~~ 274 (282)
T 3hbm_A 220 AKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEYKY 274 (282)
T ss_dssp HHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHTTCEEECGG
T ss_pred HHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHCCCEEEcch
Confidence 67786666 999999 8999999999999999999999999999999999998864
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.63 E-value=8.8e-16 Score=133.13 Aligned_cols=142 Identities=14% Similarity=0.161 Sum_probs=96.4
Q ss_pred CCCCceEEEEecCcccCCHHHHHHH-----HHHHhhCC-CcEEEEEecCCCCCcc-cccc---------CchhHH-----
Q 046033 238 KEPSSVVYVSFGSEYFLSKEEMNEL-----ASGLLLSE-VSFIWVVRFHSEGNFT-IEEA---------LPQGFA----- 296 (434)
Q Consensus 238 ~~~~~vV~vs~Gs~~~~~~~~~~~i-----~~~l~~~~-~~~i~~~~~~~~~~~~-~~~~---------~p~~~~----- 296 (434)
.+++++|||+.||... -++.+..+ ++++.+.+ .++++.++.......+ .... +|.+..
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 103 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDT 103 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCS
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhcccccccccccccccccc
Confidence 3457899999999742 35555544 37887776 6888887754321000 0000 110000
Q ss_pred -Hhh--cCCCCcEEEecccCHH-HHhc-ccCcceEEeccCcchHHHHHHhCCcEEeccCC----CChhhHHHHHHhhcee
Q 046033 297 -EEI--QGNNKGMVVQGWAPQA-KILG-HGSIGGFISHCGWGSTVEGIMYGVPIIAVPMV----LDQLFNAKMVADIGVG 367 (434)
Q Consensus 297 -~~~--~~~~~~v~~~~~~p~~-~il~-~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~----~dq~~na~~~~~~G~g 367 (434)
++. .....++.+.+|+++. .+++ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++++.|+|
T Consensus 104 ~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~ 181 (224)
T 2jzc_A 104 ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYV 181 (224)
T ss_dssp CEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCC
T ss_pred ccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCE
Confidence 000 0012256677888886 7788 8888 99999999999999999999999974 3699999999999998
Q ss_pred eeecccccCCcccHHHHHHHHHHH
Q 046033 368 LEVPRDEINQRVRKEELARVFKQV 391 (434)
Q Consensus 368 ~~~~~~~~~~~~~~~~l~~~v~~l 391 (434)
+.+ +++.|.++|.++
T Consensus 182 ~~~---------~~~~L~~~i~~l 196 (224)
T 2jzc_A 182 WSC---------APTETGLIAGLR 196 (224)
T ss_dssp CEE---------CSCTTTHHHHHH
T ss_pred EEc---------CHHHHHHHHHHH
Confidence 765 456677777776
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.42 E-value=4.9e-10 Score=108.86 Aligned_cols=359 Identities=13% Similarity=0.084 Sum_probs=181.4
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHH
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEA 81 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (434)
|+-..+..+|++|.++||+|++++.......-.. .....|++++.++.. ....+. . ......+...
T Consensus 43 G~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~---~~~~~~v~v~~~~~~-~~~~~~------~----~~~~~~~~~~ 108 (438)
T 3c48_A 43 GMNVYILSTATELAKQGIEVDIYTRATRPSQGEI---VRVAENLRVINIAAG-PYEGLS------K----EELPTQLAAF 108 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSE---EEEETTEEEEEECCS-CSSSCC------G----GGGGGGHHHH
T ss_pred CHHHHHHHHHHHHHhcCCEEEEEecCCCCCCccc---ccccCCeEEEEecCC-Cccccc------h----hHHHHHHHHH
Confidence 4556789999999999999999987643221110 011167888777432 000000 0 1111111111
Q ss_pred HHHhHHHHHHH-Hhhc-CCCEEEEcCCC--chHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCccccc
Q 046033 82 FDAAKPAFCNV-LETL-KPTLVIYDLFQ--PWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQK 157 (434)
Q Consensus 82 ~~~~~~~~~~~-l~~~-~pDlVi~d~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 157 (434)
. ..+.+. ++.. +||+|++.... ..+..+++.+|+|+|................
T Consensus 109 ~----~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~------------------- 165 (438)
T 3c48_A 109 T----GGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYRDD------------------- 165 (438)
T ss_dssp H----HHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHSCC----------------------
T ss_pred H----HHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccccccccc-------------------
Confidence 1 122233 4444 49999987321 2334567788999998776654321100000
Q ss_pred cccccccccCC-chhHHHH-HHhhhcCCcEEEEcCCchhcHHHHHHHhhhcC---CceeeeCCCCCCCC-CCC-CCCchh
Q 046033 158 MTQFKHRIVNG-TENRDRF-LKAIDLSCKLVLVKTSREIESKDLHYLSYITK---KETIPVGPLVQEPI-YTD-NNNDTK 230 (434)
Q Consensus 158 ~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vGpl~~~~~-~~~-~~~~~~ 230 (434)
. ... ......+ ...+.. ++.++..+.. ..+.+...++ .++..+..-..... ... ......
T Consensus 166 -~------~~~~~~~~~~~~~~~~~~-~d~ii~~s~~-----~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~ 232 (438)
T 3c48_A 166 -S------DTPESEARRICEQQLVDN-ADVLAVNTQE-----EMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATER 232 (438)
T ss_dssp --------CCHHHHHHHHHHHHHHHH-CSEEEESSHH-----HHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHH
T ss_pred -c------CCcchHHHHHHHHHHHhc-CCEEEEcCHH-----HHHHHHHHhCCChhheEEecCCccccccCCcccchhhh
Confidence 0 000 0000111 122333 7888887732 2233333222 34555554332211 000 001111
Q ss_pred hhhhhcCCCCCceEEEEecCccc-CCHHHHHHHHHHHhhC----CCcEEEEEecCCCCCccccccCchhHHHhh--cCCC
Q 046033 231 IMDWLSRKEPSSVVYVSFGSEYF-LSKEEMNELASGLLLS----EVSFIWVVRFHSEGNFTIEEALPQGFAEEI--QGNN 303 (434)
Q Consensus 231 ~~~~l~~~~~~~vV~vs~Gs~~~-~~~~~~~~i~~~l~~~----~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~ 303 (434)
+.+.+...+ .+.+++..|+... ...+.+...+..+.+. +.+++++ +.....+ ...+.+.+.. .+..
T Consensus 233 ~r~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~-G~~~~~g-----~~~~~l~~~~~~~~l~ 305 (438)
T 3c48_A 233 SRRELGIPL-HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIIC-GGPSGPN-----ATPDTYRHMAEELGVE 305 (438)
T ss_dssp HHHHTTCCS-SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEE-CCBC-----------CHHHHHHHHTTCT
T ss_pred hHHhcCCCC-CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEE-eCCCCCC-----cHHHHHHHHHHHcCCC
Confidence 333343322 3366777787653 2234444444444322 2333333 3211000 0111121111 0134
Q ss_pred CcEEEecccCHH---HHhcccCcceEEecc----CcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccC
Q 046033 304 KGMVVQGWAPQA---KILGHGSIGGFISHC----GWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEIN 376 (434)
Q Consensus 304 ~~v~~~~~~p~~---~il~~~~~~~~I~hg----G~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~ 376 (434)
.++.+.+++++. .++..+++ +|... ...++.||+++|+|+|+.+. ......++..+.|+.++.
T Consensus 306 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~~~---- 375 (438)
T 3c48_A 306 KRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEGETGLLVDG---- 375 (438)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBTTTEEEESS----
T ss_pred CcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCCCcEEECCC----
Confidence 689999999875 56666666 77543 34689999999999999754 344555555567877753
Q ss_pred CcccHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHhh
Q 046033 377 QRVRKEELARVFKQVVEQEE-GQQIKRKAKELSESIKKKG-DDEEINVVEKLLQL 429 (434)
Q Consensus 377 ~~~~~~~l~~~v~~ll~~~~-~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~~ 429 (434)
-+.+++.++|.+++++++ ..++.+++++..+.+.-.. .+...++++++.+.
T Consensus 376 --~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 376 --HSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp --CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 378999999999999422 2345566666666532233 55566677766553
No 26
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.40 E-value=1.9e-10 Score=110.17 Aligned_cols=305 Identities=12% Similarity=0.071 Sum_probs=154.3
Q ss_pred hHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHH
Q 046033 4 ITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFD 83 (434)
Q Consensus 4 ~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
-.-+..+|++|.++||+|++++.......-. ...++.+..++.+ ..+.. .. ... .+
T Consensus 30 ~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~------~~~~i~~~~~~~~----~~~~~-----~~---~~~-~~----- 85 (394)
T 2jjm_A 30 GVVGTELGKQLAERGHEIHFITSGLPFRLNK------VYPNIYFHEVTVN----QYSVF-----QY---PPY-DL----- 85 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECSSCC----C------CCTTEEEECCCCC--------C-----CS---CCH-HH-----
T ss_pred HHHHHHHHHHHHhCCCEEEEEeCCCCCcccc------cCCceEEEecccc----ccccc-----cc---ccc-cH-----
Confidence 3456789999999999999998754322111 1167777666322 11100 00 011 11
Q ss_pred HhHHHHHHHHhhcCCCEEEEcCCCc--hHHHHHH-Hc--CCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCcccccc
Q 046033 84 AAKPAFCNVLETLKPTLVIYDLFQP--WAAEAAY-QH--DIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQKM 158 (434)
Q Consensus 84 ~~~~~~~~~l~~~~pDlVi~d~~~~--~~~~~A~-~~--giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 158 (434)
.....+.+++++.+||+|++..... ....++. .+ ++|+|........... . .
T Consensus 86 ~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~---~---------------- 142 (394)
T 2jjm_A 86 ALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVL----G---S---------------- 142 (394)
T ss_dssp HHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTT----T---T----------------
T ss_pred HHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccccc----C---C----------------
Confidence 1123456778889999999873322 2233444 33 5999887655322110 0 0
Q ss_pred ccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcC--CceeeeCCCCCCCCCCCCCCchhhhhhhc
Q 046033 159 TQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITK--KETIPVGPLVQEPIYTDNNNDTKIMDWLS 236 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vGpl~~~~~~~~~~~~~~~~~~l~ 236 (434)
....... ....+.. ++.++..+. ...+.....++ .++..+..-..... -......++.+.+.
T Consensus 143 -------~~~~~~~--~~~~~~~-ad~ii~~s~-----~~~~~~~~~~~~~~~~~vi~ngv~~~~-~~~~~~~~~~~~~~ 206 (394)
T 2jjm_A 143 -------DPSLNNL--IRFGIEQ-SDVVTAVSH-----SLINETHELVKPNKDIQTVYNFIDERV-YFKRDMTQLKKEYG 206 (394)
T ss_dssp -------CTTTHHH--HHHHHHH-SSEEEESCH-----HHHHHHHHHTCCSSCEEECCCCCCTTT-CCCCCCHHHHHHTT
T ss_pred -------CHHHHHH--HHHHHhh-CCEEEECCH-----HHHHHHHHhhCCcccEEEecCCccHHh-cCCcchHHHHHHcC
Confidence 0000111 1112333 787887773 33333333332 36666654332211 01112233333333
Q ss_pred CCCCCceEEEEecCccc-CCHHHHHHHHHHHhhC-CCcEEEEEecCCCCCccccccCchhHHHhhc--CCCCcEEEeccc
Q 046033 237 RKEPSSVVYVSFGSEYF-LSKEEMNELASGLLLS-EVSFIWVVRFHSEGNFTIEEALPQGFAEEIQ--GNNKGMVVQGWA 312 (434)
Q Consensus 237 ~~~~~~vV~vs~Gs~~~-~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~~v~~~~~~ 312 (434)
..+ ++.+++..|.... ...+.+...+..+.+. +.+++++ +.+. . .+.+.+... +...++.+.++.
T Consensus 207 ~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~-G~g~-~--------~~~l~~~~~~~~l~~~v~~~g~~ 275 (394)
T 2jjm_A 207 ISE-SEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLV-GDGP-E--------FCTILQLVKNLHIEDRVLFLGKQ 275 (394)
T ss_dssp CC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEE-CCCT-T--------HHHHHHHHHTTTCGGGBCCCBSC
T ss_pred CCC-CCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEE-CCch-H--------HHHHHHHHHHcCCCCeEEEeCch
Confidence 222 2355666777653 2233333333334332 4444443 2211 1 111211110 123567666664
Q ss_pred CH-HHHhcccCcceEE----eccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHH
Q 046033 313 PQ-AKILGHGSIGGFI----SHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARV 387 (434)
Q Consensus 313 p~-~~il~~~~~~~~I----~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~ 387 (434)
.+ ..++..+++ +| .-|...++.||+++|+|+|+.+..+ ....++..+.|..++. -+.+++.++
T Consensus 276 ~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v~~~~~g~~~~~------~d~~~la~~ 343 (394)
T 2jjm_A 276 DNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVIQHGDTGYLCEV------GDTTGVADQ 343 (394)
T ss_dssp SCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTCCBTTTEEEECT------TCHHHHHHH
T ss_pred hhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHhhcCCceEEeCC------CCHHHHHHH
Confidence 43 367776666 77 4455678999999999999987532 1222333356777753 378999999
Q ss_pred HHHHhcc
Q 046033 388 FKQVVEQ 394 (434)
Q Consensus 388 v~~ll~~ 394 (434)
|.+++++
T Consensus 344 i~~l~~~ 350 (394)
T 2jjm_A 344 AIQLLKD 350 (394)
T ss_dssp HHHHHHC
T ss_pred HHHHHcC
Confidence 9999994
No 27
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.38 E-value=2.9e-11 Score=116.00 Aligned_cols=276 Identities=10% Similarity=0.110 Sum_probs=144.6
Q ss_pred HhHHHHHHHHhhcCCCEEEEc--C-CCchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCcccccccc
Q 046033 84 AAKPAFCNVLETLKPTLVIYD--L-FQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQKMTQ 160 (434)
Q Consensus 84 ~~~~~~~~~l~~~~pDlVi~d--~-~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 160 (434)
.....+.+++++++||+|++- . .++.+..+|+.+|||++.+...... + ..
T Consensus 101 ~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglrs-~--------------------------~~ 153 (403)
T 3ot5_A 101 RVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRT-W--------------------------NK 153 (403)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCC-S--------------------------CT
T ss_pred HHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCccc-c--------------------------cc
Confidence 345677889999999999873 2 2234578999999998754421100 0 00
Q ss_pred ccccccCC-chhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhh-hc-CCceeeeCCCCCCCC--CCCCCCchhhhhhh
Q 046033 161 FKHRIVNG-TENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSY-IT-KKETIPVGPLVQEPI--YTDNNNDTKIMDWL 235 (434)
Q Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~vGpl~~~~~--~~~~~~~~~~~~~l 235 (434)
+ ... ......+...+ ++.++..+ ....+.+.. .. +.++.++|....+.. ........+..+.+
T Consensus 154 ~----~~~p~~~~r~~~~~~---a~~~~~~s-----e~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l 221 (403)
T 3ot5_A 154 Y----SPFPEEMNRQLTGVM---ADIHFSPT-----KQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENL 221 (403)
T ss_dssp T----SSTTHHHHHHHHHHH---CSEEEESS-----HHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC
T ss_pred c----cCCcHHHHHHHHHHh---cCEEECCC-----HHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcchHHHHhc
Confidence 0 000 00111222221 45566665 222222222 22 246888886432200 00000112323323
Q ss_pred cCCCCCceEEEEecCcccCCHHHHHHHHHHHhh-----CCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEec
Q 046033 236 SRKEPSSVVYVSFGSEYFLSKEEMNELASGLLL-----SEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQG 310 (434)
Q Consensus 236 ~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~-----~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~ 310 (434)
+++++++++.|.....+ +.+..+++++.. .+..+++.+..+ .. + ....++..+..+++.+.+
T Consensus 222 ---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~----~~----~-~~~l~~~~~~~~~v~l~~ 288 (403)
T 3ot5_A 222 ---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLN----PA----V-REKAMAILGGHERIHLIE 288 (403)
T ss_dssp ---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSC----HH----H-HHHHHHHHTTCTTEEEEC
T ss_pred ---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCC----HH----H-HHHHHHHhCCCCCEEEeC
Confidence 34568888766422111 124555555543 233444443211 00 0 011111111346888888
Q ss_pred ccCHH---HHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHH
Q 046033 311 WAPQA---KILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARV 387 (434)
Q Consensus 311 ~~p~~---~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~ 387 (434)
++++. .+++.+++ +|+.+|..+ .||.+.|+|+|++|...+++. +.+.|.|+.+. .+++++.++
T Consensus 289 ~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~g~~~lv~-------~d~~~l~~a 354 (403)
T 3ot5_A 289 PLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEAGTLKLIG-------TNKENLIKE 354 (403)
T ss_dssp CCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHHTSEEECC-------SCHHHHHHH
T ss_pred CCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----heeCCcEEEcC-------CCHHHHHHH
Confidence 88743 66676666 998875333 799999999999976666654 24678887775 279999999
Q ss_pred HHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHh
Q 046033 388 FKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 428 (434)
Q Consensus 388 v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~ 428 (434)
+.++++ ++..+++..+-+..+.+.+ .+++.++++.+..
T Consensus 355 i~~ll~---~~~~~~~m~~~~~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 355 ALDLLD---NKESHDKMAQAANPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHHHHH---CHHHHHHHHHSCCTTCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHc---CHHHHHHHHhhcCcccCCcHHHHHHHHHHHHhC
Confidence 999998 5554444332222222222 4445555555443
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.37 E-value=1e-11 Score=118.98 Aligned_cols=276 Identities=12% Similarity=0.138 Sum_probs=146.4
Q ss_pred HHhHHHHHHHHhhcCCCEEEEc--CCC-chHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCccccccc
Q 046033 83 DAAKPAFCNVLETLKPTLVIYD--LFQ-PWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQKMT 159 (434)
Q Consensus 83 ~~~~~~~~~~l~~~~pDlVi~d--~~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 159 (434)
......+.+++++++||+|++- ..+ +.++.+|+.+|||++.+...... +.
T Consensus 97 ~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~rs-~~-------------------------- 149 (396)
T 3dzc_A 97 SKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLRT-GN-------------------------- 149 (396)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCCC-SC--------------------------
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCccc-cc--------------------------
Confidence 3345677889999999999873 232 34578899999998755421100 00
Q ss_pred cccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhh-hcC-CceeeeCCCCCCCCCCCCCC-------chh
Q 046033 160 QFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSY-ITK-KETIPVGPLVQEPIYTDNNN-------DTK 230 (434)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~vGpl~~~~~~~~~~~-------~~~ 230 (434)
.+ ........+.. +..-++.++..+- ...+.+.. ..+ .++.++|....+........ ..+
T Consensus 150 ~~----~~~~~~~~r~~--~~~~a~~~~~~se-----~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~ 218 (396)
T 3dzc_A 150 IY----SPWPEEGNRKL--TAALTQYHFAPTD-----TSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQAT 218 (396)
T ss_dssp TT----SSTTHHHHHHH--HHHTCSEEEESSH-----HHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHH
T ss_pred cc----cCCcHHHHHHH--HHHhcCEEECCCH-----HHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHH
Confidence 00 00001111211 1111566666662 22222222 222 46888885432210000000 023
Q ss_pred hhhhhc-CCCCCceEEEEecCcccCCHHHHHHHHHHHhh-----CCCcEEEEEecCCCCCccccccCchhHHHhhcCCCC
Q 046033 231 IMDWLS-RKEPSSVVYVSFGSEYFLSKEEMNELASGLLL-----SEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNK 304 (434)
Q Consensus 231 ~~~~l~-~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~-----~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 304 (434)
+.+.+. ..+++++|+++.+-...... .+..+++++.. .+..+++.++.+ .. +-+.+. +..+..+
T Consensus 219 ~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~----~~----~~~~l~-~~~~~~~ 288 (396)
T 3dzc_A 219 LESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLN----PN----VREPVN-KLLKGVS 288 (396)
T ss_dssp HHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBC----HH----HHHHHH-HHTTTCT
T ss_pred HHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCC----hH----HHHHHH-HHHcCCC
Confidence 333333 12345688777633222222 24556666543 234444443211 00 001111 1111346
Q ss_pred cEEEecccCH---HHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccH
Q 046033 305 GMVVQGWAPQ---AKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRK 381 (434)
Q Consensus 305 ~v~~~~~~p~---~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~ 381 (434)
++.+.+++++ ..+++.+++ +|+-+| |.+.||.++|+|+|+.....+++. +.+.|.++.+. .++
T Consensus 289 ~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~G~~~lv~-------~d~ 354 (396)
T 3dzc_A 289 NIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAAGTVKLVG-------TNQ 354 (396)
T ss_dssp TEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHHTSEEECT-------TCH
T ss_pred CEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHcCceEEcC-------CCH
Confidence 8888777754 366676666 999887 666899999999999866555532 34668886664 268
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHH
Q 046033 382 EELARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKL 426 (434)
Q Consensus 382 ~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l 426 (434)
++|.+++.++++ +++.++ +|++.....+ ..++.++++.|
T Consensus 355 ~~l~~ai~~ll~---d~~~~~---~m~~~~~~~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 355 QQICDALSLLLT---DPQAYQ---AMSQAHNPYGDGKACQRIADIL 394 (396)
T ss_dssp HHHHHHHHHHHH---CHHHHH---HHHTSCCTTCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHc---CHHHHH---HHhhccCCCcCChHHHHHHHHH
Confidence 999999999999 554443 3444444445 55555666554
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.36 E-value=1.9e-11 Score=116.38 Aligned_cols=85 Identities=18% Similarity=0.262 Sum_probs=62.2
Q ss_pred CCcEEEecccCHH---HHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcc
Q 046033 303 NKGMVVQGWAPQA---KILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRV 379 (434)
Q Consensus 303 ~~~v~~~~~~p~~---~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~ 379 (434)
.+++.+.++++.. .+++.+++ +|+.+| |.+.||+++|+|+|+.+..+++... .+.|.|+.++ .
T Consensus 254 ~~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~g~g~lv~-------~ 319 (376)
T 1v4v_A 254 VRNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKAGILKLAG-------T 319 (376)
T ss_dssp CTTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHHTSEEECC-------S
T ss_pred CCCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcCCceEECC-------C
Confidence 3578888665553 66776665 998874 4466999999999998876666552 4568887774 2
Q ss_pred cHHHHHHHHHHHhcccchHHHHHHH
Q 046033 380 RKEELARVFKQVVEQEEGQQIKRKA 404 (434)
Q Consensus 380 ~~~~l~~~v~~ll~~~~~~~~~~~a 404 (434)
+++++.++|.++++ +++.+++.
T Consensus 320 d~~~la~~i~~ll~---d~~~~~~~ 341 (376)
T 1v4v_A 320 DPEGVYRVVKGLLE---NPEELSRM 341 (376)
T ss_dssp CHHHHHHHHHHHHT---CHHHHHHH
T ss_pred CHHHHHHHHHHHHh---ChHhhhhh
Confidence 89999999999999 55444433
No 30
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.35 E-value=1.1e-09 Score=104.50 Aligned_cols=300 Identities=11% Similarity=0.044 Sum_probs=160.6
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHH
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEA 81 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (434)
|.-..+..+++.| +||+|++++........... ....++.++.++.. .. ....
T Consensus 20 G~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~-------------~~~~------ 72 (394)
T 3okp_A 20 GIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY---DKTLDYEVIRWPRS---VM-------------LPTP------ 72 (394)
T ss_dssp HHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH---HTTCSSEEEEESSS---SC-------------CSCH------
T ss_pred hHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh---ccccceEEEEcccc---cc-------------ccch------
Confidence 3445677888888 69999999987665421110 01167888777321 00 0011
Q ss_pred HHHhHHHHHHHHhhcCCCEEEEcCCC--chHHHHHHHcCCc-EEEEecchHHHHHhhhccCCCCCCCCCcCCCCcccccc
Q 046033 82 FDAAKPAFCNVLETLKPTLVIYDLFQ--PWAAEAAYQHDIA-AVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQKM 158 (434)
Q Consensus 82 ~~~~~~~~~~~l~~~~pDlVi~d~~~--~~~~~~A~~~giP-~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 158 (434)
.....+.+++++.+||+|++.... .....+++.+|+| +|...........
T Consensus 73 --~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------------------------- 125 (394)
T 3okp_A 73 --TTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWS------------------------- 125 (394)
T ss_dssp --HHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHT-------------------------
T ss_pred --hhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhh-------------------------
Confidence 123455678888999999986332 3445667889998 4434433222110
Q ss_pred ccccccccCCchhHHHHH-HhhhcCCcEEEEcCCchhcHHHHHHHhhhc--CCceeeeCCCCCCCCCCC-C-CCchhhhh
Q 046033 159 TQFKHRIVNGTENRDRFL-KAIDLSCKLVLVKTSREIESKDLHYLSYIT--KKETIPVGPLVQEPIYTD-N-NNDTKIMD 233 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vGpl~~~~~~~~-~-~~~~~~~~ 233 (434)
..+....+. ..+.. ++.++..+. ...+.....+ ..++..+..-........ . ....++.+
T Consensus 126 ---------~~~~~~~~~~~~~~~-~d~ii~~s~-----~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~ 190 (394)
T 3okp_A 126 ---------MLPGSRQSLRKIGTE-VDVLTYISQ-----YTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRK 190 (394)
T ss_dssp ---------TSHHHHHHHHHHHHH-CSEEEESCH-----HHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHH
T ss_pred ---------hcchhhHHHHHHHHh-CCEEEEcCH-----HHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHH
Confidence 001111222 22333 788888873 2333333333 235665654332211000 0 01123333
Q ss_pred hhcCCCCCceEEEEecCccc-CCHHHHHHHHHHHhhC--CCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEec
Q 046033 234 WLSRKEPSSVVYVSFGSEYF-LSKEEMNELASGLLLS--EVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQG 310 (434)
Q Consensus 234 ~l~~~~~~~vV~vs~Gs~~~-~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~ 310 (434)
.+...+ ++.+++..|+... ...+.+...+..+.+. +.+++++ +.+ .. .+.+.+...+...++.+.+
T Consensus 191 ~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g-~~--------~~~l~~~~~~~~~~v~~~g 259 (394)
T 3okp_A 191 KLGFTD-TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GSG-RY--------ESTLRRLATDVSQNVKFLG 259 (394)
T ss_dssp HTTCCT-TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CCC-TT--------HHHHHHHTGGGGGGEEEEE
T ss_pred hcCCCc-CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cCc-hH--------HHHHHHHHhcccCeEEEcC
Confidence 333322 3366777787643 2234444444444332 4454444 221 11 1111111111346899999
Q ss_pred ccCHH---HHhcccCcceEEe-----------ccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccC
Q 046033 311 WAPQA---KILGHGSIGGFIS-----------HCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEIN 376 (434)
Q Consensus 311 ~~p~~---~il~~~~~~~~I~-----------hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~ 376 (434)
++++. .++..+++ +|. -|...++.||+++|+|+|+.+..+-. ..+. .|.|..++.
T Consensus 260 ~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~----e~i~-~~~g~~~~~---- 328 (394)
T 3okp_A 260 RLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAP----ETVT-PATGLVVEG---- 328 (394)
T ss_dssp SCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGG----GGCC-TTTEEECCT----
T ss_pred CCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChH----HHHh-cCCceEeCC----
Confidence 99766 45666666 775 45567899999999999997654321 1222 246776653
Q ss_pred CcccHHHHHHHHHHHhcc
Q 046033 377 QRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 377 ~~~~~~~l~~~v~~ll~~ 394 (434)
-+.+++.++|.+++++
T Consensus 329 --~d~~~l~~~i~~l~~~ 344 (394)
T 3okp_A 329 --SDVDKLSELLIELLDD 344 (394)
T ss_dssp --TCHHHHHHHHHHHHTC
T ss_pred --CCHHHHHHHHHHHHhC
Confidence 3799999999999994
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.34 E-value=1.2e-10 Score=111.04 Aligned_cols=306 Identities=14% Similarity=0.158 Sum_probs=155.1
Q ss_pred hHHHHHHHHHHHhCCC-EEEEEeCCCchhhhhhhhcccCCCCeEE-EEecCCCCCCCCCCCCCCCCCCCccccHHHHHHH
Q 046033 4 ITPYLALAKKLSQQNF-HIYFCSTPINLQSMSQNLQEKFSTSIQL-IDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEA 81 (434)
Q Consensus 4 ~~p~l~lA~~L~~~Gh-~V~~~~~~~~~~~v~~~~~~~~~~g~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (434)
...+.+|+++|+++|+ +|.++.+........... +. .|+.+ ..++.. + .. ......
T Consensus 13 ~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~----~--~~---------~~~~~~---- 70 (384)
T 1vgv_A 13 AIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVL-KL--FSIVPDYDLNIM----Q--PG---------QGLTEI---- 70 (384)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHH-HH--HTCCCSEECCCC----S--TT---------SCHHHH----
T ss_pred HHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHH-HH--cCCCCCcceecC----C--CC---------ccHHHH----
Confidence 4557789999999995 887665543322111100 00 23333 233111 1 00 111111
Q ss_pred HHHhHHHHHHHHhhcCCCEEEEcC---CCchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCcccccc
Q 046033 82 FDAAKPAFCNVLETLKPTLVIYDL---FQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQKM 158 (434)
Q Consensus 82 ~~~~~~~~~~~l~~~~pDlVi~d~---~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 158 (434)
.......+.+++++.+||+|++.. ..+.+..+|+.+|+|++.+...... . .. +
T Consensus 71 ~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~-~-------~~----------------~ 126 (384)
T 1vgv_A 71 TCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT-G-------DL----------------Y 126 (384)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC-S-------CT----------------T
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc-c-------cc----------------c
Confidence 122235677888999999999852 2234466788899999865432210 0 00 0
Q ss_pred ccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhh-hcC-CceeeeCCCCCCCCC--CCC-CC----ch
Q 046033 159 TQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSY-ITK-KETIPVGPLVQEPIY--TDN-NN----DT 229 (434)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~vGpl~~~~~~--~~~-~~----~~ 229 (434)
..+ .....+. .+.+.++.++..+-. ..+.+.. ..+ .++..+|....+... ... .. ..
T Consensus 127 ~~~-------~~~~~~~--~~~~~~d~ii~~s~~-----~~~~l~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~ 192 (384)
T 1vgv_A 127 SPW-------PEEANRT--LTGHLAMYHFSPTET-----SRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRS 192 (384)
T ss_dssp SST-------THHHHHH--HHHTTCSEEEESSHH-----HHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHH
T ss_pred CCC-------chHhhHH--HHHhhccEEEcCcHH-----HHHHHHHcCCChhhEEEeCChHHHHHHhhhhccccchhhhH
Confidence 000 0011111 112226667766622 1122222 122 356667653211000 000 00 01
Q ss_pred hhhhhhc-CCCCCceEEEEecCcccCCHHHHHHHHHHHhh----C-CCcEEEEEecCCCCCccccccCchhHHHhhcCCC
Q 046033 230 KIMDWLS-RKEPSSVVYVSFGSEYFLSKEEMNELASGLLL----S-EVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNN 303 (434)
Q Consensus 230 ~~~~~l~-~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~----~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 303 (434)
++.+.+. ..+++++|+++.|...... +.+..+++++.. . +.++++..+.+ . . .-+.+.+.. +..
T Consensus 193 ~~~~~~~~~~~~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~--~--~----~~~~l~~~~-~~~ 262 (384)
T 1vgv_A 193 ELAANYPFIDPDKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN--P--N----VREPVNRIL-GHV 262 (384)
T ss_dssp HHHTTCTTCCTTSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC--H--H----HHHHHHHHH-TTC
T ss_pred HHHHhccccCCCCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC--H--H----HHHHHHHHh-hcC
Confidence 2233332 2233567888888754322 334455555533 2 33444432211 0 0 001111111 123
Q ss_pred CcEEEecccCHH---HHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCccc
Q 046033 304 KGMVVQGWAPQA---KILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVR 380 (434)
Q Consensus 304 ~~v~~~~~~p~~---~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~ 380 (434)
+++.+.++++.. .++..+++ +|+.+| +.+.||+++|+|+|+.+..++... +.+.|.|+.++ . +
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~g~g~lv~-----~--d 328 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTAGTVRLVG-----T--D 328 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHHTSEEEEC-----S--S
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhCCceEEeC-----C--C
Confidence 578886666653 66776666 998875 448899999999999987444332 34568888885 2 8
Q ss_pred HHHHHHHHHHHhc
Q 046033 381 KEELARVFKQVVE 393 (434)
Q Consensus 381 ~~~l~~~v~~ll~ 393 (434)
++++.++|.++++
T Consensus 329 ~~~la~~i~~ll~ 341 (384)
T 1vgv_A 329 KQRIVEEVTRLLK 341 (384)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999999
No 32
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.27 E-value=4.8e-09 Score=101.61 Aligned_cols=348 Identities=10% Similarity=0.030 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCCchhhhh---------hh----hcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCc
Q 046033 5 TPYLALAKKLSQQNFHIYFCSTPINLQSMS---------QN----LQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIP 71 (434)
Q Consensus 5 ~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~---------~~----~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~ 71 (434)
.-+..+|++|+++||+|+++++......-. .. .......|++++.++.+ -+... ...
T Consensus 22 ~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~----~~~~~------~~~ 91 (439)
T 3fro_A 22 EALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIGGG----LLDSE------DVY 91 (439)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEESG----GGGCS------STT
T ss_pred HHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEecch----hcccc------ccc
Confidence 347889999999999999999543222100 00 00001167888777321 01100 110
Q ss_pred cccHHHHHHHHHHhHHHHHHHHh-----hcCCCEEEEcCCCc--hHHHHHHHcCCcEEEEecchHHHH---HhhhccCCC
Q 046033 72 RHLIPTLIEAFDAAKPAFCNVLE-----TLKPTLVIYDLFQP--WAAEAAYQHDIAAVAFVTIAAASF---SFFLQNSSL 141 (434)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~-----~~~pDlVi~d~~~~--~~~~~A~~~giP~v~~~~~~~~~~---~~~~~~~~~ 141 (434)
......+...+......+.++++ ..+||+|.+..... .+..+++..|+|+|.......... ......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~--- 168 (439)
T 3fro_A 92 GPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEA--- 168 (439)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHT---
T ss_pred cCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEecccccccCchHHhCcc---
Confidence 11111211112122223333333 45999999874322 245666778999998776553110 000000
Q ss_pred CCCCCCcCCCCccccccccccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCCceeeeCCCCCCCC
Q 046033 142 KFPFPEFDLPESEIQKMTQFKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKKETIPVGPLVQEPI 221 (434)
Q Consensus 142 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vGpl~~~~~ 221 (434)
. +.... ...... .....+.. ++.++..|....+. ..... +....++..|..-.....
T Consensus 169 ----------~-----~~~~~---~~~~~~--~~~~~~~~-ad~ii~~S~~~~~~-~~~~~-~~~~~~i~vi~ngvd~~~ 225 (439)
T 3fro_A 169 ----------G-----LSELA---PYPDID--PEHTGGYI-ADIVTTVSRGYLID-EWGFF-RNFEGKITYVFNGIDCSF 225 (439)
T ss_dssp ----------T-----CGGGC---CSSEEC--HHHHHHHH-CSEEEESCHHHHHH-THHHH-GGGTTSEEECCCCCCTTT
T ss_pred ----------c-----ccccc---ccceee--Hhhhhhhh-ccEEEecCHHHHHH-Hhhhh-hhcCCceeecCCCCCchh
Confidence 0 00000 000001 11112223 77788777432222 11111 112345555543222110
Q ss_pred -CCC------CCCchhhhhhhcCCCCCceEEEEecCcc-c-CCHHHHHHHHHHHhhCC--CcEEEEEecCCCCCcccccc
Q 046033 222 -YTD------NNNDTKIMDWLSRKEPSSVVYVSFGSEY-F-LSKEEMNELASGLLLSE--VSFIWVVRFHSEGNFTIEEA 290 (434)
Q Consensus 222 -~~~------~~~~~~~~~~l~~~~~~~vV~vs~Gs~~-~-~~~~~~~~i~~~l~~~~--~~~i~~~~~~~~~~~~~~~~ 290 (434)
.+. .....++.+.+...+ + .+++..|+.. . ...+.+...+..+.+.. ..+-+.+.+.... .
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~---~--- 297 (439)
T 3fro_A 226 WNESYLTGSRDERKKSLLSKFGMDE-G-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP---E--- 297 (439)
T ss_dssp SCGGGSCSCHHHHHHHHHHHHTCCS-C-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCH---H---
T ss_pred cCcccccchhhhhHHHHHHHcCCCC-C-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCCh---h---
Confidence 000 001223333344333 3 7777888876 3 33455555555555432 2333333221110 0
Q ss_pred CchhHHHhhcCCCCcEEEecccCHH---HHhcccCcceEEec----cCcchHHHHHHhCCcEEeccCCCChhhHHHHHHh
Q 046033 291 LPQGFAEEIQGNNKGMVVQGWAPQA---KILGHGSIGGFISH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD 363 (434)
Q Consensus 291 ~p~~~~~~~~~~~~~v~~~~~~p~~---~il~~~~~~~~I~h----gG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~ 363 (434)
..+.+.+...+...++.+.+|+++. .++..+++ +|.- |-..++.||+++|+|+|+... ......++
T Consensus 298 ~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~- 370 (439)
T 3fro_A 298 LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIIT- 370 (439)
T ss_dssp HHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCC-
T ss_pred HHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEE-
Confidence 0011111111122456667888886 45665665 7743 334799999999999998743 33444443
Q ss_pred hceeeeecccccCCcccHHHHHHHHHHHhc-ccc-hHHHHHHHHHHHH
Q 046033 364 IGVGLEVPRDEINQRVRKEELARVFKQVVE-QEE-GQQIKRKAKELSE 409 (434)
Q Consensus 364 ~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~-~~~-~~~~~~~a~~l~~ 409 (434)
.|.|..++. -+++++.++|.++++ +++ ...+.+++++..+
T Consensus 371 ~~~g~~~~~------~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 412 (439)
T 3fro_A 371 NETGILVKA------GDPGELANAILKALELSRSDLSKFRENCKKRAM 412 (439)
T ss_dssp TTTCEEECT------TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred cCceEEeCC------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Confidence 468877763 378999999999998 533 3567777776663
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.27 E-value=3.3e-09 Score=101.74 Aligned_cols=298 Identities=10% Similarity=0.028 Sum_probs=153.6
Q ss_pred ChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHH
Q 046033 3 HITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAF 82 (434)
Q Consensus 3 H~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (434)
.-..+..++++|.++||+|++++............. ..+ +++.++.. . . .... .+.
T Consensus 37 ~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~---~~~-~~~~~~~~---~----~----~~~~--~~~------- 92 (406)
T 2gek_A 37 VQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV---SGG-KAVPIPYN---G----S----VARL--RFG------- 92 (406)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE---ECC-CCC-------------------------CC-------
T ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc---cCC-cEEecccc---C----C----cccc--ccc-------
Confidence 345678999999999999999998755432221000 011 12111100 0 0 0000 000
Q ss_pred HHhHHHHHHHHhhcCCCEEEEcCC--CchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCcccccccc
Q 046033 83 DAAKPAFCNVLETLKPTLVIYDLF--QPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQKMTQ 160 (434)
Q Consensus 83 ~~~~~~~~~~l~~~~pDlVi~d~~--~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 160 (434)
......+.++++..+||+|++... ...+..+++..|+|+|............ ...
T Consensus 93 ~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~-----------------------~~~ 149 (406)
T 2gek_A 93 PATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLT-----------------------LSV 149 (406)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHHH-----------------------HHH
T ss_pred HHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhhhh-----------------------HHH
Confidence 011245667788889999997732 2335667777899999876552110000 000
Q ss_pred ccccccCCchhHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhhhcCC-ceeeeCCCCCCCCCCCCCCchhhhhhhcCCC
Q 046033 161 FKHRIVNGTENRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSYITKK-ETIPVGPLVQEPIYTDNNNDTKIMDWLSRKE 239 (434)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vGpl~~~~~~~~~~~~~~~~~~l~~~~ 239 (434)
+. .. +...+.. ++.++..+. ...+.....++. ++ .+................. . .
T Consensus 150 ~~-------~~---~~~~~~~-~d~ii~~s~-----~~~~~~~~~~~~~~~-vi~~~v~~~~~~~~~~~~~------~-~ 205 (406)
T 2gek_A 150 FQ-------GI---LRPYHEK-IIGRIAVSD-----LARRWQMEALGSDAV-EIPNGVDVASFADAPLLDG------Y-P 205 (406)
T ss_dssp HH-------ST---THHHHTT-CSEEEESSH-----HHHHHHHHHHSSCEE-ECCCCBCHHHHHTCCCCTT------C-S
T ss_pred HH-------HH---HHHHHhh-CCEEEECCH-----HHHHHHHHhcCCCcE-EecCCCChhhcCCCchhhh------c-c
Confidence 00 00 0122333 777887773 222333333432 34 4432221100000000000 0 1
Q ss_pred CCceEEEEecCc-cc-CCHHHHHHHHHHHhhC--CCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHH
Q 046033 240 PSSVVYVSFGSE-YF-LSKEEMNELASGLLLS--EVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQA 315 (434)
Q Consensus 240 ~~~vV~vs~Gs~-~~-~~~~~~~~i~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~ 315 (434)
+...+++..|+. .. ...+.+...+..+.+. +.+++++ +.+ . . +.+.+...+...++.+.+++++.
T Consensus 206 ~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~~--~-------~-~~l~~~~~~~~~~v~~~g~~~~~ 274 (406)
T 2gek_A 206 REGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIV-GRG--D-------E-DELREQAGDLAGHLRFLGQVDDA 274 (406)
T ss_dssp CSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEE-SCS--C-------H-HHHHHHTGGGGGGEEECCSCCHH
T ss_pred CCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEE-cCC--c-------H-HHHHHHHHhccCcEEEEecCCHH
Confidence 012566677876 33 2334444444444332 3444433 221 1 0 12222211114689999999885
Q ss_pred ---HHhcccCcceEEec----cCc-chHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHH
Q 046033 316 ---KILGHGSIGGFISH----CGW-GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARV 387 (434)
Q Consensus 316 ---~il~~~~~~~~I~h----gG~-~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~ 387 (434)
.++..+++ +|.- .|+ .++.||+++|+|+|+.+. ......++..+.|..++. -+.+++.++
T Consensus 275 ~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~~~g~~~~~------~d~~~l~~~ 342 (406)
T 2gek_A 275 TKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADGDAGRLVPV------DDADGMAAA 342 (406)
T ss_dssp HHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTTTSSEECCT------TCHHHHHHH
T ss_pred HHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCCCceEEeCC------CCHHHHHHH
Confidence 66676666 7743 343 489999999999998754 455666666667777753 378999999
Q ss_pred HHHHhcc
Q 046033 388 FKQVVEQ 394 (434)
Q Consensus 388 v~~ll~~ 394 (434)
|.+++++
T Consensus 343 i~~l~~~ 349 (406)
T 2gek_A 343 LIGILED 349 (406)
T ss_dssp HHHHHHC
T ss_pred HHHHHcC
Confidence 9999983
No 34
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.25 E-value=1.8e-10 Score=109.46 Aligned_cols=300 Identities=15% Similarity=0.137 Sum_probs=159.9
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCchh-hhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHHH
Q 046033 6 PYLALAKKLSQQNFHIYFCSTPINLQ-SMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFDA 84 (434)
Q Consensus 6 p~l~lA~~L~~~Gh~V~~~~~~~~~~-~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (434)
-+.+|.++|.++ +++.++.+..+.+ .+..-.. .+|.. +.| . ..+... . .... .....
T Consensus 24 k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~----~~~~i---~~~-~-~~l~~~----~----~~~~----~~~~~ 81 (385)
T 4hwg_A 24 KLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF----DDMGI---RKP-D-YFLEVA----A----DNTA----KSIGL 81 (385)
T ss_dssp HHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH----C-CCC---CCC-S-EECCCC----C----CCSH----HHHHH
T ss_pred HHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH----hhCCC---CCC-c-eecCCC----C----CCHH----HHHHH
Confidence 356778888777 9998888887765 2222000 22222 112 0 001111 0 1122 22333
Q ss_pred hHHHHHHHHhhcCCCEEEEc--CCCchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCcccccccccc
Q 046033 85 AKPAFCNVLETLKPTLVIYD--LFQPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEIQKMTQFK 162 (434)
Q Consensus 85 ~~~~~~~~l~~~~pDlVi~d--~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 162 (434)
....+.+++++++||+|+.- ..+.+++.+|.++|||++.+...... ++
T Consensus 82 ~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eaglrs---------------------------~~--- 131 (385)
T 4hwg_A 82 VIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNRC---------------------------FD--- 131 (385)
T ss_dssp HHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCCCC---------------------------SC---
T ss_pred HHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCCcc---------------------------cc---
Confidence 45677789999999999863 33344488999999997755422100 00
Q ss_pred ccccCCch-hHHHHHHhhhcCCcEEEEcCCchhcHHHHHHHhh-hcC-CceeeeCCCCCCCCCC--CCCCchhhhhhhcC
Q 046033 163 HRIVNGTE-NRDRFLKAIDLSCKLVLVKTSREIESKDLHYLSY-ITK-KETIPVGPLVQEPIYT--DNNNDTKIMDWLSR 237 (434)
Q Consensus 163 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~vGpl~~~~~~~--~~~~~~~~~~~l~~ 237 (434)
..... ..+.+...+ ++.++..+- ...+.+.. ..+ .++..+|....+.... ......++.+.+..
T Consensus 132 ---~~~pee~nR~~~~~~---a~~~~~~te-----~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl 200 (385)
T 4hwg_A 132 ---QRVPEEINRKIIDHI---SDVNITLTE-----HARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSL 200 (385)
T ss_dssp ---TTSTHHHHHHHHHHH---CSEEEESSH-----HHHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTC
T ss_pred ---ccCcHHHHHHHHHhh---hceeecCCH-----HHHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCC
Confidence 00000 111222222 455666552 22222222 232 4688888643221000 00011233334443
Q ss_pred CCCCceEEEEecCcccCC-HHHHHHHHHHHhhC----CCcEEEEEecCCCCCccccccCchhHHHhh---cCCCCcEEEe
Q 046033 238 KEPSSVVYVSFGSEYFLS-KEEMNELASGLLLS----EVSFIWVVRFHSEGNFTIEEALPQGFAEEI---QGNNKGMVVQ 309 (434)
Q Consensus 238 ~~~~~vV~vs~Gs~~~~~-~~~~~~i~~~l~~~----~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~v~~~ 309 (434)
.+ +++|+++.|.....+ .+.+..+++++... +..+++..... ..+ ..++. .+..+++.+.
T Consensus 201 ~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~------~~~-----~l~~~~~~~~~~~~v~l~ 268 (385)
T 4hwg_A 201 TP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR------TKK-----RLEDLEGFKELGDKIRFL 268 (385)
T ss_dssp CT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH------HHH-----HHHTSGGGGGTGGGEEEC
T ss_pred Cc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH------HHH-----HHHHHHHHhcCCCCEEEE
Confidence 33 568999887653322 24566677776542 45555543210 000 00100 0123578776
Q ss_pred cccCH---HHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHH
Q 046033 310 GWAPQ---AKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELAR 386 (434)
Q Consensus 310 ~~~p~---~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~ 386 (434)
+.+++ ..+++.+++ +|+-.|. .+.||.+.|+|+|.++...+.+. ..+.|.++.+. .++++|.+
T Consensus 269 ~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~G~~~lv~-------~d~~~i~~ 334 (385)
T 4hwg_A 269 PAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDAGTLIMSG-------FKAERVLQ 334 (385)
T ss_dssp CCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHHTCCEECC-------SSHHHHHH
T ss_pred cCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhcCceEEcC-------CCHHHHHH
Confidence 66654 367777776 9998876 46999999999999987655332 24568877664 27999999
Q ss_pred HHHHHhcc
Q 046033 387 VFKQVVEQ 394 (434)
Q Consensus 387 ~v~~ll~~ 394 (434)
++.+++++
T Consensus 335 ai~~ll~d 342 (385)
T 4hwg_A 335 AVKTITEE 342 (385)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhC
Confidence 99999984
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.24 E-value=4e-09 Score=104.33 Aligned_cols=370 Identities=13% Similarity=0.051 Sum_probs=177.3
Q ss_pred hHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhh--cccC--CCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHH
Q 046033 4 ITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNL--QEKF--STSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLI 79 (434)
Q Consensus 4 ~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~--~~~~--~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (434)
-..+..+|++|.++||+|++++............ .... ..|++++.++.. . .. ... .......+.
T Consensus 36 ~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~~---~---~~-~~~----~~~~~~~~~ 104 (499)
T 2r60_A 36 LVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFG---G---DK-FLP----KEELWPYLH 104 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEEEEECCS---C---SS-CCC----GGGCGGGHH
T ss_pred eehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEEEEecCC---C---cC-CcC----HHHHHHHHH
Confidence 3567899999999999999998654321101000 0011 268888887432 1 00 000 001111111
Q ss_pred HHHHHhHHHHHHHHhh--cCCCEEEEcCC--CchHHHHHHHcCCcEEEEecchHHHHHhhhccCCCCCCCCCcCCCCccc
Q 046033 80 EAFDAAKPAFCNVLET--LKPTLVIYDLF--QPWAAEAAYQHDIAAVAFVTIAAASFSFFLQNSSLKFPFPEFDLPESEI 155 (434)
Q Consensus 80 ~~~~~~~~~~~~~l~~--~~pDlVi~d~~--~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 155 (434)
. ....+.+++++ .+||+|.+... ...+..+++.+|+|+|................ ...+ .+
T Consensus 105 ~----~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~~~~~~~~~--~~~~-----~~---- 169 (499)
T 2r60_A 105 E----YVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLNV--NTSN-----FK---- 169 (499)
T ss_dssp H----HHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHHHHHHTTCC--CSTT-----SH----
T ss_pred H----HHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCcccccchhhcc--CCCC-----cc----
Confidence 1 12345566776 58999988732 12334567788999998766654322110000 0000 00
Q ss_pred cccccccccccCCchhHHHH-HHhhhcCCcEEEEcCCchhcHHHHHHHhhh--cC--------CceeeeCCCCCCCCCCC
Q 046033 156 QKMTQFKHRIVNGTENRDRF-LKAIDLSCKLVLVKTSREIESKDLHYLSYI--TK--------KETIPVGPLVQEPIYTD 224 (434)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~~vGpl~~~~~~~~ 224 (434)
.+.... .......+ ...+.. ++.++..+. ...+..... ++ .++..|..-..... -.
T Consensus 170 -~~~~~~-----~~~~~~~~~~~~~~~-ad~vi~~S~-----~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~-~~ 236 (499)
T 2r60_A 170 -EMDERF-----KFHRRIIAERLTMSY-ADKIIVSTS-----QERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRV-FD 236 (499)
T ss_dssp -HHHHHH-----CHHHHHHHHHHHHHH-CSEEEESSH-----HHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTT-SS
T ss_pred -hhhhhH-----HHHHHHHHHHHHHhc-CCEEEECCH-----HHHHHHHhhhcccccccccCCCCeEEECCCcChhh-cC
Confidence 000000 00000111 122333 788888773 233333332 22 24444433222110 00
Q ss_pred CCCc----hhhhhhhc-----CCCCCceEEEEecCcccCCHHHHHHHHHHHhhCC-----CcEEEEEecCCCCCcccccc
Q 046033 225 NNND----TKIMDWLS-----RKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSE-----VSFIWVVRFHSEGNFTIEEA 290 (434)
Q Consensus 225 ~~~~----~~~~~~l~-----~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~-----~~~i~~~~~~~~~~~~~~~~ 290 (434)
.... ..+.+-+. ... +..+++..|.... .+.+..+++++.... ...++.++...+...+ .+.
T Consensus 237 ~~~~~~~~~~~r~~~~~~~~~~~~-~~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~-y~~ 312 (499)
T 2r60_A 237 GEYGDKIKAKITKYLERDLGSERM-ELPAIIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFED-YSR 312 (499)
T ss_dssp SCCCHHHHHHHHHHHHHHSCGGGT-TSCEEEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTB-CTT
T ss_pred ccchhhhHHHHHHHhcccccccCC-CCcEEEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccc-ccc
Confidence 0011 23333332 222 2355667777642 344555666665542 1123444431110000 000
Q ss_pred C-------chhHHHhh--cCCCCcEEEecccCHH---HHhccc----CcceEEec----cCcchHHHHHHhCCcEEeccC
Q 046033 291 L-------PQGFAEEI--QGNNKGMVVQGWAPQA---KILGHG----SIGGFISH----CGWGSTVEGIMYGVPIIAVPM 350 (434)
Q Consensus 291 ~-------p~~~~~~~--~~~~~~v~~~~~~p~~---~il~~~----~~~~~I~h----gG~~s~~eal~~GvP~v~~P~ 350 (434)
+ -+.+.+.. .+...++.+.+++++. .++..+ ++ +|.- |-..++.||+++|+|+|+...
T Consensus 313 l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~ 390 (499)
T 2r60_A 313 AGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN 390 (499)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS
T ss_pred ccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC
Confidence 0 01111111 1134679899999765 556666 55 7743 234689999999999998853
Q ss_pred CCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHh-cc-hHHHHHHHHHHH
Q 046033 351 VLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVEQEE-GQQIKRKAKELSESIKK-KG-DDEEINVVEKLL 427 (434)
Q Consensus 351 ~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~~~-~~~~~~~a~~l~~~~~~-~~-~~~~~~~ve~l~ 427 (434)
......+.....|..++. -+.+++.++|.+++++.+ ..++.+++++..+.-.+ .. .....++++++.
T Consensus 391 ----~g~~e~v~~~~~g~l~~~------~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 460 (499)
T 2r60_A 391 ----GGPAEILDGGKYGVLVDP------EDPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIA 460 (499)
T ss_dssp ----BHHHHHTGGGTSSEEECT------TCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHhcCCceEEEeCC------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 344555555557877753 378999999999999421 12334444444333111 11 334455555554
Q ss_pred h
Q 046033 428 Q 428 (434)
Q Consensus 428 ~ 428 (434)
.
T Consensus 461 ~ 461 (499)
T 2r60_A 461 D 461 (499)
T ss_dssp H
T ss_pred h
Confidence 4
No 36
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.11 E-value=3.1e-09 Score=100.82 Aligned_cols=82 Identities=10% Similarity=0.152 Sum_probs=59.2
Q ss_pred CcEEEecccCHH---HHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCccc
Q 046033 304 KGMVVQGWAPQA---KILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVR 380 (434)
Q Consensus 304 ~~v~~~~~~p~~---~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~ 380 (434)
+++.+.+++++. .++..+++ +|+.+| +.+.||+++|+|+|.....+... .+...|.|+.++ .+
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~g~g~~v~-------~d 328 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEAGTLKLAG-------TD 328 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHTTSEEECC-------SC
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecCCceEEcC-------CC
Confidence 588887777664 55665555 888763 55889999999999986534332 234567888774 17
Q ss_pred HHHHHHHHHHHhcccchHHHHH
Q 046033 381 KEELARVFKQVVEQEEGQQIKR 402 (434)
Q Consensus 381 ~~~l~~~v~~ll~~~~~~~~~~ 402 (434)
++++.++|.++++ +++.++
T Consensus 329 ~~~la~~i~~ll~---~~~~~~ 347 (375)
T 3beo_A 329 EETIFSLADELLS---DKEAHD 347 (375)
T ss_dssp HHHHHHHHHHHHH---CHHHHH
T ss_pred HHHHHHHHHHHHh---ChHhHh
Confidence 8999999999999 554443
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.05 E-value=4.2e-09 Score=99.84 Aligned_cols=112 Identities=12% Similarity=0.246 Sum_probs=74.0
Q ss_pred CCcEEEecccCH-HHHhcccCcceEEe----ccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCC
Q 046033 303 NKGMVVQGWAPQ-AKILGHGSIGGFIS----HCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQ 377 (434)
Q Consensus 303 ~~~v~~~~~~p~-~~il~~~~~~~~I~----hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~ 377 (434)
..++.+.++..+ ..++..+++ +|. -|..+++.||+++|+|+|+.+.. .+...++..+.|..+. +
T Consensus 252 ~~~v~~~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~~~g~~~~-----~ 320 (374)
T 2iw1_A 252 RSNVHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADANCGTVIA-----E 320 (374)
T ss_dssp GGGEEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHHTCEEEEC-----S
T ss_pred CCcEEECCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccCCceEEeC-----C
Confidence 467888887544 367776676 775 45668899999999999998653 3455667778898885 1
Q ss_pred cccHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHhcc-hHHHHHHHHH
Q 046033 378 RVRKEELARVFKQVVEQEE-GQQIKRKAKELSESIKKKG-DDEEINVVEK 425 (434)
Q Consensus 378 ~~~~~~l~~~v~~ll~~~~-~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~ 425 (434)
.-+.+++.++|.+++++.+ ...+.+++++..+...-.. .+.+.++++.
T Consensus 321 ~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 321 PFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2479999999999998422 2344555555554331122 4445555543
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.00 E-value=2.5e-07 Score=89.05 Aligned_cols=79 Identities=13% Similarity=0.051 Sum_probs=58.1
Q ss_pred CCCcEEEecccC---HH---HHhcccCcceEEecc----CcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeec
Q 046033 302 NNKGMVVQGWAP---QA---KILGHGSIGGFISHC----GWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVP 371 (434)
Q Consensus 302 ~~~~v~~~~~~p---~~---~il~~~~~~~~I~hg----G~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~ 371 (434)
...++.+.+|++ +. .++..+++ +|... ...++.||+++|+|+|..+. ..+...++..+.|..++
T Consensus 291 ~~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~~~g~l~~ 364 (416)
T 2x6q_A 291 EDYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDGETGFLVR 364 (416)
T ss_dssp TCTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBTTTEEEES
T ss_pred CCCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecCCCeEEEC
Confidence 346888888775 22 55666666 77544 45689999999999999754 34555565566787773
Q ss_pred ccccCCcccHHHHHHHHHHHhcc
Q 046033 372 RDEINQRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 372 ~~~~~~~~~~~~l~~~v~~ll~~ 394 (434)
+.+++.++|.+++++
T Consensus 365 --------d~~~la~~i~~ll~~ 379 (416)
T 2x6q_A 365 --------DANEAVEVVLYLLKH 379 (416)
T ss_dssp --------SHHHHHHHHHHHHHC
T ss_pred --------CHHHHHHHHHHHHhC
Confidence 789999999999983
No 39
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.95 E-value=1.6e-08 Score=94.68 Aligned_cols=152 Identities=11% Similarity=0.066 Sum_probs=90.7
Q ss_pred EEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHH---HHhcc
Q 046033 244 VYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQA---KILGH 320 (434)
Q Consensus 244 V~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~---~il~~ 320 (434)
+++..|+.. ..+.+..++++++..+.+++++ +.+. . .+.+ +.+..+. ..++.+.+++++. .++..
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~-~----~~~l-~~~~~~~---~~~v~~~g~~~~~~l~~~~~~ 231 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW-E----PEYF-DEITRRY---GSTVEPIGEVGGERRLDLLAS 231 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC-C----HHHH-HHHHHHH---TTTEEECCCCCHHHHHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc-c----HHHH-HHHHHHh---CCCEEEeccCCHHHHHHHHHh
Confidence 344567654 2344566666766666666555 2211 1 0001 1122222 2689999999886 66666
Q ss_pred cCcceEEec-------------cC-cchHHHHHHhCCcEEeccCCCChhhHHHHHHh--hceeeeecccccCCcccHHHH
Q 046033 321 GSIGGFISH-------------CG-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVAD--IGVGLEVPRDEINQRVRKEEL 384 (434)
Q Consensus 321 ~~~~~~I~h-------------gG-~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~--~G~g~~~~~~~~~~~~~~~~l 384 (434)
+++ +|.. -| ..++.||+++|+|+|+.... .+...++. -+.|..++ . +.+++
T Consensus 232 adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~~~g~~~~------~-d~~~l 298 (342)
T 2iuy_A 232 AHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGEVVGYGTD------F-APDEA 298 (342)
T ss_dssp CSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEEECCSSSC------C-CHHHH
T ss_pred CCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCCCceEEcC------C-CHHHH
Confidence 666 6632 33 36899999999999998653 45566666 45777664 3 89999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHH-HHHHhcc-hHHHHHHHHHHH
Q 046033 385 ARVFKQVVEQEEGQQIKRKAKELS-ESIKKKG-DDEEINVVEKLL 427 (434)
Q Consensus 385 ~~~v~~ll~~~~~~~~~~~a~~l~-~~~~~~~-~~~~~~~ve~l~ 427 (434)
.++|.++++ ++++++.. +.+.-.. .+...++++++.
T Consensus 299 ~~~i~~l~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 336 (342)
T 2iuy_A 299 RRTLAGLPA-------SDEVRRAAVRLWGHVTIAERYVEQYRRLL 336 (342)
T ss_dssp HHHHHTSCC-------HHHHHHHHHHHHBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-------HHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 999999987 44555443 2222222 444555555543
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.90 E-value=7.9e-07 Score=87.34 Aligned_cols=129 Identities=11% Similarity=0.077 Sum_probs=74.6
Q ss_pred eEEEEecCcccC-CHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEE-EecccCHH---HH
Q 046033 243 VVYVSFGSEYFL-SKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMV-VQGWAPQA---KI 317 (434)
Q Consensus 243 vV~vs~Gs~~~~-~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~-~~~~~p~~---~i 317 (434)
.+++..|..... ..+.+...+..+.+.+.+++++-.+. . . .-+.+.+...+...++. +.++ +.. .+
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-~---~----~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~ 362 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD-V---A----LEGALLAAASRHHGRVGVAIGY-NEPLSHLM 362 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC-H---H----HHHHHHHHHHHTTTTEEEEESC-CHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc-h---H----HHHHHHHHHHhCCCcEEEecCC-CHHHHHHH
Confidence 467777886542 23444444444444455655553211 0 0 00111111111235776 5677 443 45
Q ss_pred hcccCcceEEec----cCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhh---------ceeeeecccccCCcccHHHH
Q 046033 318 LGHGSIGGFISH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI---------GVGLEVPRDEINQRVRKEEL 384 (434)
Q Consensus 318 l~~~~~~~~I~h----gG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~---------G~g~~~~~~~~~~~~~~~~l 384 (434)
+..+++ +|.- |-..++.||+++|+|+|+... ......++.- +.|..++. -+++++
T Consensus 363 ~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~------~d~~~l 430 (485)
T 1rzu_A 363 QAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVIDANHAALASKAATGVQFSP------VTLDGL 430 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEESS------CSHHHH
T ss_pred HhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecccccccccccCCcceEeCC------CCHHHH
Confidence 666666 7743 334689999999999999754 3444444443 57777753 378999
Q ss_pred HHHHHHHh
Q 046033 385 ARVFKQVV 392 (434)
Q Consensus 385 ~~~v~~ll 392 (434)
.++|.+++
T Consensus 431 a~~i~~ll 438 (485)
T 1rzu_A 431 KQAIRRTV 438 (485)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999999
No 41
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.84 E-value=2.3e-06 Score=83.95 Aligned_cols=130 Identities=15% Similarity=0.131 Sum_probs=73.8
Q ss_pred ceEEEEecCccc-CCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEE-EecccCHH---H
Q 046033 242 SVVYVSFGSEYF-LSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMV-VQGWAPQA---K 316 (434)
Q Consensus 242 ~vV~vs~Gs~~~-~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~-~~~~~p~~---~ 316 (434)
..+++..|.... ...+.+...+..+.+.+.+++++-.+.. ..-+.+.+...+...++. +.++ +.. .
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~--------~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~ 362 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDP--------VLQEGFLAAAAEYPGQVGVQIGY-HEAFSHR 362 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECH--------HHHHHHHHHHHHSTTTEEEEESC-CHHHHHH
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCch--------HHHHHHHHHHHhCCCcEEEeCCC-CHHHHHH
Confidence 356666776543 2234444444444434556555533210 000111111111235675 6677 443 5
Q ss_pred HhcccCcceEEec----cCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhh---------ceeeeecccccCCcccHHH
Q 046033 317 ILGHGSIGGFISH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADI---------GVGLEVPRDEINQRVRKEE 383 (434)
Q Consensus 317 il~~~~~~~~I~h----gG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~---------G~g~~~~~~~~~~~~~~~~ 383 (434)
++..+++ +|.- |...++.||+++|+|+|+... ......++.- +.|..++. -++++
T Consensus 363 ~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~------~d~~~ 430 (485)
T 2qzs_A 363 IMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFED------SNAWS 430 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECS------SSHHH
T ss_pred HHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECC------CCHHH
Confidence 5666666 7733 334688999999999998743 3444444443 57877753 37899
Q ss_pred HHHHHHHHh
Q 046033 384 LARVFKQVV 392 (434)
Q Consensus 384 l~~~v~~ll 392 (434)
++++|.+++
T Consensus 431 la~~i~~ll 439 (485)
T 2qzs_A 431 LLRAIRRAF 439 (485)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999999
No 42
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.73 E-value=2.1e-06 Score=81.36 Aligned_cols=95 Identities=18% Similarity=0.287 Sum_probs=68.2
Q ss_pred cEEEecccCH-HHHhcccCcceEEec-----cCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCc
Q 046033 305 GMVVQGWAPQ-AKILGHGSIGGFISH-----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQR 378 (434)
Q Consensus 305 ~v~~~~~~p~-~~il~~~~~~~~I~h-----gG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~ 378 (434)
++.+.++..+ ..+++.+++ ++.- +|..++.||+++|+|+|.-|..++.......+...|.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~------- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVK------- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECC-------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeC-------
Confidence 4555554443 366666665 5542 234789999999999998787777777776666678887664
Q ss_pred ccHHHHHHHHHHHhcccc-hHHHHHHHHHHHHH
Q 046033 379 VRKEELARVFKQVVEQEE-GQQIKRKAKELSES 410 (434)
Q Consensus 379 ~~~~~l~~~v~~ll~~~~-~~~~~~~a~~l~~~ 410 (434)
+++++.++|.+++++ + ..++.+++++..+.
T Consensus 332 -d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 -NETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp -SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 789999999999986 3 35677777766554
No 43
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.57 E-value=1.7e-05 Score=81.88 Aligned_cols=81 Identities=14% Similarity=0.123 Sum_probs=52.6
Q ss_pred CCCcEEEeccc----CHHHHhcc-c-CcceEEec----cCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeec
Q 046033 302 NNKGMVVQGWA----PQAKILGH-G-SIGGFISH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVP 371 (434)
Q Consensus 302 ~~~~v~~~~~~----p~~~il~~-~-~~~~~I~h----gG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~ 371 (434)
...++.+.++. +...+... . +++++|.- |-..++.||+++|+|+|+.. .......++.-+.|+.++
T Consensus 638 L~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~dg~~Gllv~ 713 (816)
T 3s28_A 638 LNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVHGKSGFHID 713 (816)
T ss_dssp CBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCBTTTBEEEC
T ss_pred CCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHccCCcEEEeC
Confidence 34678777744 34444331 1 12337743 33468999999999999963 334455555556787776
Q ss_pred ccccCCcccHHHHHHHHHHHh
Q 046033 372 RDEINQRVRKEELARVFKQVV 392 (434)
Q Consensus 372 ~~~~~~~~~~~~l~~~v~~ll 392 (434)
. -++++++++|.+++
T Consensus 714 p------~D~e~LA~aI~~lL 728 (816)
T 3s28_A 714 P------YHGDQAADTLADFF 728 (816)
T ss_dssp T------TSHHHHHHHHHHHH
T ss_pred C------CCHHHHHHHHHHHH
Confidence 3 37899999997776
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.54 E-value=8.7e-06 Score=78.00 Aligned_cols=76 Identities=13% Similarity=0.158 Sum_probs=50.7
Q ss_pred EEEecccCHH---HHhcccCcceEEec----cCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhce------------
Q 046033 306 MVVQGWAPQA---KILGHGSIGGFISH----CGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGV------------ 366 (434)
Q Consensus 306 v~~~~~~p~~---~il~~~~~~~~I~h----gG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~------------ 366 (434)
+.+.+|+++. .++..+++ +|.- |...++.||+++|+|+|+... ......+.....
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGDCVYKIKPSAWISVD 329 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTTTSEEECCCEEEECT
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccCcccccccccccccc
Confidence 6677899865 55666665 7742 234589999999999998643 233333333221
Q ss_pred ---ee--eecccccCCcccHHHHHHHHHHHhcc
Q 046033 367 ---GL--EVPRDEINQRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 367 ---g~--~~~~~~~~~~~~~~~l~~~v~~ll~~ 394 (434)
|. .+.. -+++++.++| +++++
T Consensus 330 ~~~G~~gl~~~------~d~~~la~~i-~l~~~ 355 (413)
T 3oy2_A 330 DRDGIGGIEGI------IDVDDLVEAF-TFFKD 355 (413)
T ss_dssp TTCSSCCEEEE------CCHHHHHHHH-HHTTS
T ss_pred cccCcceeeCC------CCHHHHHHHH-HHhcC
Confidence 44 4442 3899999999 99993
No 45
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.45 E-value=0.00019 Score=71.71 Aligned_cols=82 Identities=10% Similarity=0.165 Sum_probs=59.1
Q ss_pred CcEEEecccCHH---HHhcccCcceEEe---ccCcchHHHHHHhCCcEEeccCCCC-hhhHHHHHHhhceeeeecccccC
Q 046033 304 KGMVVQGWAPQA---KILGHGSIGGFIS---HCGWGSTVEGIMYGVPIIAVPMVLD-QLFNAKMVADIGVGLEVPRDEIN 376 (434)
Q Consensus 304 ~~v~~~~~~p~~---~il~~~~~~~~I~---hgG~~s~~eal~~GvP~v~~P~~~d-q~~na~~~~~~G~g~~~~~~~~~ 376 (434)
+++.+.+++++. .++..+++ +|. .|+..++.||+++|+|+|+.|...= -..-+..+...|+.-.+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~----- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNV----- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBC-----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhc-----
Confidence 679999999854 55666665 762 3666799999999999999764311 112245566667776664
Q ss_pred CcccHHHHHHHHHHHhcc
Q 046033 377 QRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 377 ~~~~~~~l~~~v~~ll~~ 394 (434)
+ +++++.+++.+++++
T Consensus 507 ~--~~~~la~~i~~l~~~ 522 (568)
T 2vsy_A 507 A--DDAAFVAKAVALASD 522 (568)
T ss_dssp S--SHHHHHHHHHHHHHC
T ss_pred C--CHHHHHHHHHHHhcC
Confidence 1 889999999999993
No 46
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=98.40 E-value=4.9e-05 Score=70.53 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=80.9
Q ss_pred cEEEecccCHHHHh---cccCcceEEeccC---------cchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecc
Q 046033 305 GMVVQGWAPQAKIL---GHGSIGGFISHCG---------WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPR 372 (434)
Q Consensus 305 ~v~~~~~~p~~~il---~~~~~~~~I~hgG---------~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~ 372 (434)
|+.+.+|+|...+. ..++..++.+-+. .+.+.|++++|+|+|+.+ ...++..+++.|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~~~G~~~~- 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENNGLGWIVK- 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHHTCEEEES-
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhCCeEEEeC-
Confidence 89999999998654 3345543443332 346889999999999754 456778888999999985
Q ss_pred cccCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc--hHHHHHHHHHH
Q 046033 373 DEINQRVRKEELARVFKQVVEQEEGQQIKRKAKELSESIKKKG--DDEEINVVEKL 426 (434)
Q Consensus 373 ~~~~~~~~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~--~~~~~~~ve~l 426 (434)
+.+++.+++..+.. ++-.++++++++.++.++++- .+.+.+.+.+|
T Consensus 290 -------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRKGFFTRRLLTESVFQA 337 (339)
T ss_dssp -------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHTTHHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 57888899988754 234689999999999988755 55666666655
No 47
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.23 E-value=8.8e-06 Score=68.16 Aligned_cols=142 Identities=14% Similarity=0.166 Sum_probs=86.7
Q ss_pred eEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEecCCCCCccccccCchhHHHh-hcCCCCcEEEecccCHH---HH
Q 046033 243 VVYVSFGSEYFLSKEEMNELASGLLLS-EVSFIWVVRFHSEGNFTIEEALPQGFAEE-IQGNNKGMVVQGWAPQA---KI 317 (434)
Q Consensus 243 vV~vs~Gs~~~~~~~~~~~i~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~v~~~~~~p~~---~i 317 (434)
.+++..|+... .+.+..++++++.. +.+++++.. +... ..+ .....+ ..+...++.+.+|+++. .+
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~-~~~~-----~~l-~~~~~~~~~~l~~~v~~~g~~~~~e~~~~ 94 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGW-FSKG-----DHA-ERYARKIMKIAPDNVKFLGSVSEEELIDL 94 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBC-CCTT-----STH-HHHHHHHHHHSCTTEEEEESCCHHHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEec-CccH-----HHH-HHHHHhhhcccCCcEEEeCCCCHHHHHHH
Confidence 44556677542 34466667777665 455555432 2111 111 111110 00144589999999983 66
Q ss_pred hcccCcceEEe---ccCc-chHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhc
Q 046033 318 LGHGSIGGFIS---HCGW-GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVE 393 (434)
Q Consensus 318 l~~~~~~~~I~---hgG~-~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~ 393 (434)
+..+++ +|. +.|+ .++.||+++|+|+|+... ..+...++..+.|..+ . -+.+++.++|.++++
T Consensus 95 ~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~~~g~~~-~------~d~~~l~~~i~~l~~ 161 (177)
T 2f9f_A 95 YSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINEKTGYLV-N------ADVNEIIDAMKKVSK 161 (177)
T ss_dssp HHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBTTTEEEE-C------SCHHHHHHHHHHHHH
T ss_pred HHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCCCccEEe-C------CCHHHHHHHHHHHHh
Confidence 776666 775 3344 499999999999998743 4555666666677766 3 279999999999998
Q ss_pred ccchHH-HHHHHHHHHH
Q 046033 394 QEEGQQ-IKRKAKELSE 409 (434)
Q Consensus 394 ~~~~~~-~~~~a~~l~~ 409 (434)
+ +. +++++++.++
T Consensus 162 ~---~~~~~~~~~~~a~ 175 (177)
T 2f9f_A 162 N---PDKFKKDCFRRAK 175 (177)
T ss_dssp C---TTTTHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHh
Confidence 4 33 2555554443
No 48
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.17 E-value=0.00045 Score=65.95 Aligned_cols=75 Identities=13% Similarity=0.113 Sum_probs=55.0
Q ss_pred CCCcEEEecccCHH---HHhcccCcceEEe---ccCc-chHHHHH-------HhCCcEEeccCCCChhhHHHHHHhhcee
Q 046033 302 NNKGMVVQGWAPQA---KILGHGSIGGFIS---HCGW-GSTVEGI-------MYGVPIIAVPMVLDQLFNAKMVADIGVG 367 (434)
Q Consensus 302 ~~~~v~~~~~~p~~---~il~~~~~~~~I~---hgG~-~s~~eal-------~~GvP~v~~P~~~dq~~na~~~~~~G~g 367 (434)
..+++.+.+++++. .++..+++ +|. +.|+ .++.||+ ++|+|+|.... +..-..|
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~~~G 330 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGPYKS 330 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCSCSS
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccCcce
Confidence 34689999999876 45565565 763 3343 5789999 99999999854 4444567
Q ss_pred ee-ecccccCCcccHHHHHHHHHHHhcc
Q 046033 368 LE-VPRDEINQRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 368 ~~-~~~~~~~~~~~~~~l~~~v~~ll~~ 394 (434)
.. ++. -++++++++|.+++++
T Consensus 331 ~l~v~~------~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 331 RFGYTP------GNADSVIAAITQALEA 352 (406)
T ss_dssp EEEECT------TCHHHHHHHHHHHHHC
T ss_pred EEEeCC------CCHHHHHHHHHHHHhC
Confidence 66 553 3789999999999984
No 49
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.93 E-value=0.00096 Score=63.78 Aligned_cols=85 Identities=14% Similarity=0.065 Sum_probs=55.2
Q ss_pred CCcEEEecccCHH---HHhcccCcceEEecc---Cc-chHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeeccccc
Q 046033 303 NKGMVVQGWAPQA---KILGHGSIGGFISHC---GW-GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEI 375 (434)
Q Consensus 303 ~~~v~~~~~~p~~---~il~~~~~~~~I~hg---G~-~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~ 375 (434)
..++.+.+++++. .++..+++ +|.-+ |. .+++||+++|+|+|.- ..+ ....++.-..|+.++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~~~G~lv~~--- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWHSNIVSLEQ--- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTBTTEEEESS---
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcCCCEEEeCC---
Confidence 3578888999876 45555565 77532 44 4679999999999983 222 1123333346776653
Q ss_pred CCcccHHHHHHHHHHHhcccchHHHHHH
Q 046033 376 NQRVRKEELARVFKQVVEQEEGQQIKRK 403 (434)
Q Consensus 376 ~~~~~~~~l~~~v~~ll~~~~~~~~~~~ 403 (434)
-++++++++|.++++ +++.+++
T Consensus 364 ---~d~~~la~ai~~ll~---~~~~~~~ 385 (413)
T 2x0d_A 364 ---LNPENIAETLVELCM---SFNNRDV 385 (413)
T ss_dssp ---CSHHHHHHHHHHHHH---HTC----
T ss_pred ---CCHHHHHHHHHHHHc---CHHHHHH
Confidence 378999999999999 5544444
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.81 E-value=8.3e-05 Score=61.17 Aligned_cols=143 Identities=12% Similarity=0.129 Sum_probs=75.9
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHhhCC--CcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHH---H
Q 046033 242 SVVYVSFGSEYFLSKEEMNELASGLLLSE--VSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQA---K 316 (434)
Q Consensus 242 ~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~--~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~---~ 316 (434)
|++++..|+... .+.+..+++++.... ..+-+.+.+.... .+.+.+...+...++.+ .|+++. .
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~--------~~~~~~~~~~~~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPD--------EKKIKLLAQKLGVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTT--------HHHHHHHHHHHTCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCcc--------HHHHHHHHHHcCCeEEE-eecCHHHHHH
Confidence 477788887653 244555666665542 2333333322111 11121111112237778 999875 5
Q ss_pred HhcccCcceEEec----cCcchHHHHHHhCC-cEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHH
Q 046033 317 ILGHGSIGGFISH----CGWGSTVEGIMYGV-PIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQV 391 (434)
Q Consensus 317 il~~~~~~~~I~h----gG~~s~~eal~~Gv-P~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~l 391 (434)
++..+++ +|.- |...++.||+++|+ |+|.....+... ..+...+. .+. .-+.+++.++|.++
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~---~~~~~~~~--~~~------~~~~~~l~~~i~~l 137 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSATR---QFALDERS--LFE------PNNAKDLSAKIDWW 137 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG---GGCSSGGG--EEC------TTCHHHHHHHHHHH
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh---hhccCCce--EEc------CCCHHHHHHHHHHH
Confidence 5665555 7752 33469999999996 999943221111 11111222 222 23799999999999
Q ss_pred hcccc-hHHHHHHHHHHH
Q 046033 392 VEQEE-GQQIKRKAKELS 408 (434)
Q Consensus 392 l~~~~-~~~~~~~a~~l~ 408 (434)
+++.+ ..++.+++++.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~ 155 (166)
T 3qhp_A 138 LENKLERERMQNEYAKSA 155 (166)
T ss_dssp HHCHHHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHH
Confidence 99421 123444444443
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.72 E-value=0.00058 Score=70.05 Aligned_cols=159 Identities=14% Similarity=0.220 Sum_probs=101.9
Q ss_pred CCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhc
Q 046033 240 PSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILG 319 (434)
Q Consensus 240 ~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~ 319 (434)
+..+||.+|-+....+++.+..-.+.|++.+.-++|......... ..+-+.+ ++.+-....+.+.+..+..+.|.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~----~~l~~~~-~~~gi~~~r~~f~~~~~~~~~l~ 595 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE----PNIQQYA-QNMGLPQNRIIFSPVAPKEEHVR 595 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGH----HHHHHHH-HHTTCCGGGEEEEECCCHHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHH----HHHHHHH-HhcCCCcCeEEECCCCCHHHHHH
Confidence 345999999888889999999888889888888888876432111 1111111 11111345688888888764443
Q ss_pred -ccCcceEE---eccCcchHHHHHHhCCcEEeccC-CCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhcc
Q 046033 320 -HGSIGGFI---SHCGWGSTVEGIMYGVPIIAVPM-VLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 320 -~~~~~~~I---~hgG~~s~~eal~~GvP~v~~P~-~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~ 394 (434)
+..+|.++ -.+|.+|++|||.+|||+|.++- ..-...-+-.+..+|+.-.+- -+.++-.+..-++-+
T Consensus 596 ~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia-------~~~~~Y~~~a~~la~- 667 (723)
T 4gyw_A 596 RGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA-------KNRQEYEDIAVKLGT- 667 (723)
T ss_dssp HGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC-------SSHHHHHHHHHHHHH-
T ss_pred HhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc-------CCHHHHHHHHHHHhc-
Confidence 23344476 47889999999999999999983 233445555666678876664 267776666666666
Q ss_pred cchHHHHHHH-HHHHHHHHh
Q 046033 395 EEGQQIKRKA-KELSESIKK 413 (434)
Q Consensus 395 ~~~~~~~~~a-~~l~~~~~~ 413 (434)
|+..+... ++|++.+..
T Consensus 668 --d~~~l~~lr~~l~~~~~~ 685 (723)
T 4gyw_A 668 --DLEYLKKVRGKVWKQRIS 685 (723)
T ss_dssp --CHHHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHh
Confidence 44333333 244455444
No 52
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.58 E-value=0.0011 Score=56.15 Aligned_cols=92 Identities=15% Similarity=0.120 Sum_probs=63.4
Q ss_pred cEEE-ecccCHH---HHhcccCcceEEecc---C-cchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccC
Q 046033 305 GMVV-QGWAPQA---KILGHGSIGGFISHC---G-WGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEIN 376 (434)
Q Consensus 305 ~v~~-~~~~p~~---~il~~~~~~~~I~hg---G-~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~ 376 (434)
++.+ .+++++. .++..+++ +|... | ..++.||+++|+|+|+... ......+ ..+.|..+..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~~~g~~~~~---- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TNETGILVKA---- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CTTTCEEECT----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CCCceEEecC----
Confidence 8888 8999854 56666665 77433 3 4689999999999988743 3445555 4567777753
Q ss_pred CcccHHHHHHHHHHHhc-ccc-hHHHHHHHHHHHH
Q 046033 377 QRVRKEELARVFKQVVE-QEE-GQQIKRKAKELSE 409 (434)
Q Consensus 377 ~~~~~~~l~~~v~~ll~-~~~-~~~~~~~a~~l~~ 409 (434)
-+.+++.++|.++++ +.+ ..++.+++++..+
T Consensus 165 --~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 165 --GDPGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 378999999999998 632 2345555555443
No 53
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.46 E-value=0.0024 Score=63.10 Aligned_cols=142 Identities=8% Similarity=0.029 Sum_probs=88.2
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhc-c
Q 046033 242 SVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILG-H 320 (434)
Q Consensus 242 ~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~-~ 320 (434)
.++|.+|+......++.+....+.+++.+..++|....+..... ...+-+.+... +..+.+.+.+.+|..+.+. +
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~--~~~~~~~~~~~--GI~~Rv~F~g~~p~~e~la~y 516 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI--THPYVERFIKS--YLGDSATAHPHSPYHQYLRIL 516 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG--GHHHHHHHHHH--HHGGGEEEECCCCHHHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh--hHHHHHHHHHc--CCCccEEEcCCCCHHHHHHHH
Confidence 58999998877778888888888888877777765322111100 01111111111 0224677888888765442 2
Q ss_pred cCcceEE---eccCcchHHHHHHhCCcEEeccCCC-ChhhHHHHHHhhceeee-ecccccCCcccHHHHHHHHHHHhcc
Q 046033 321 GSIGGFI---SHCGWGSTVEGIMYGVPIIAVPMVL-DQLFNAKMVADIGVGLE-VPRDEINQRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 321 ~~~~~~I---~hgG~~s~~eal~~GvP~v~~P~~~-dq~~na~~~~~~G~g~~-~~~~~~~~~~~~~~l~~~v~~ll~~ 394 (434)
..+|.++ ..+|..|++||+++|||+|..+-.. ....-+..+...|+.-. +. -+.++..++.-++.+|
T Consensus 517 ~~aDIfLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA-------~d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 517 HNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA-------NTVDEYVERAVRLAEN 588 (631)
T ss_dssp HTCSEEECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-------SSHHHHHHHHHHHHHC
T ss_pred hcCcEEEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec-------CCHHHHHHHHHHHhCC
Confidence 3344477 3478899999999999999987432 22223334556677652 43 2688888888888883
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.30 E-value=0.16 Score=50.07 Aligned_cols=169 Identities=9% Similarity=0.051 Sum_probs=84.2
Q ss_pred eEEEEecCccc-CCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHH---HHh
Q 046033 243 VVYVSFGSEYF-LSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQA---KIL 318 (434)
Q Consensus 243 vV~vs~Gs~~~-~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~---~il 318 (434)
++++..|.... ...+.+.+.+..+.+.+.+++++..+. .. ....+.....+...++.+....+.. .++
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~-~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 399 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK-KK-------FEKLLKSMEEKYPGKVRAVVKFNAPLAHLIM 399 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBC-HH-------HHHHHHHHHHHSTTTEEEECSCCHHHHHHHH
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccC-ch-------HHHHHHHHHhhcCCceEEEEeccHHHHHHHH
Confidence 45566677543 223444444444444566665553321 10 0011111111134567776666664 455
Q ss_pred cccCcceEEecc---Cc-chHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccc----cCCcccHHHHHHHHHH
Q 046033 319 GHGSIGGFISHC---GW-GSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDE----INQRVRKEELARVFKQ 390 (434)
Q Consensus 319 ~~~~~~~~I~hg---G~-~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~----~~~~~~~~~l~~~v~~ 390 (434)
+.+++ +|.-. |+ .+++||+++|+|+|+... ......+..-.-|....... .....+++.+.++|++
T Consensus 400 ~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~r 473 (536)
T 3vue_A 400 AGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKR 473 (536)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHH
T ss_pred Hhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHH
Confidence 65565 77542 33 488999999999998743 33444444433443222100 0112467889999998
Q ss_pred HhcccchHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHh
Q 046033 391 VVEQEEGQQIKRKAKELSESIKK-KGDDEEINVVEKLLQ 428 (434)
Q Consensus 391 ll~~~~~~~~~~~a~~l~~~~~~-~~~~~~~~~ve~l~~ 428 (434)
+++.-.++.+++..++ .+++ ..++..++-.++|.+
T Consensus 474 al~~~~~~~~~~~~~~---am~~~fSW~~~A~~y~~ly~ 509 (536)
T 3vue_A 474 AIKVVGTPAYEEMVRN---CMNQDLSWKGPAKNWENVLL 509 (536)
T ss_dssp HHHHTTSHHHHHHHHH---HHHSCCSSHHHHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHH---HHHhcCCHHHHHHHHHHHHH
Confidence 8761113444332221 1222 345555554555544
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.24 E-value=0.0084 Score=55.76 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=62.1
Q ss_pred CChHHHHHHHHHHHhC--CCEEEEEeCCCchhhhhhhhcccCCCCeE-EEEecCCCCCCCCCCCCCCCCCCCccccHHHH
Q 046033 2 GHITPYLALAKKLSQQ--NFHIYFCSTPINLQSMSQNLQEKFSTSIQ-LIDLQLPCTFPELHDPYNHTTKNIPRHLIPTL 78 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~--Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (434)
|++.-+.++.++|+++ +.+|++++.+.+.+.++.. +.++ ++.+ + .. .....+
T Consensus 20 GD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~------p~vd~vi~~--~-------~~----------~~~~~~ 74 (349)
T 3tov_A 20 GDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN------PNIDELIVV--D-------KK----------GRHNSI 74 (349)
T ss_dssp HHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC------TTCSEEEEE--C-------CS----------SHHHHH
T ss_pred cHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC------CCccEEEEe--C-------cc----------cccccH
Confidence 6666778888999887 9999999999988888763 4553 4444 1 00 011111
Q ss_pred HHHHHHhHHHHHHHHhhcCC-CEEEEcCCCchHHHHHHHcCCcEEE
Q 046033 79 IEAFDAAKPAFCNVLETLKP-TLVIYDLFQPWAAEAAYQHDIAAVA 123 (434)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~p-DlVi~d~~~~~~~~~A~~~giP~v~ 123 (434)
... ..+...++..++ |+||.-....-...++...|+|..+
T Consensus 75 ~~~-----~~l~~~Lr~~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 75 SGL-----NEVAREINAKGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HHH-----HHHHHHHHHHCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred HHH-----HHHHHHHhhCCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 111 134456777899 9999776666677788889999754
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.61 E-value=0.26 Score=45.36 Aligned_cols=92 Identities=13% Similarity=0.029 Sum_probs=58.1
Q ss_pred CChHHHHHHHHHHHhC--CCEEEEEeCCCchhhhhhhhcccCCCCe-EEEEecCCCCCCCCCCCCCCCCCCCccccHHHH
Q 046033 2 GHITPYLALAKKLSQQ--NFHIYFCSTPINLQSMSQNLQEKFSTSI-QLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTL 78 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~--Gh~V~~~~~~~~~~~v~~~~~~~~~~g~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (434)
|++.-..++.++|+++ +.+|++++.+...+.+... +.+ +++.+ + .... ...+..
T Consensus 12 GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~------p~i~~v~~~--~-----~~~~---------~~~~~~- 68 (348)
T 1psw_A 12 GDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM------PEVNEAIPM--P-----LGHG---------ALEIGE- 68 (348)
T ss_dssp HHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC------TTEEEEEEC-----------------------CHHH-
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC------CccCEEEEe--c-----CCcc---------ccchHH-
Confidence 6666778888999887 9999999999877776652 445 34333 1 0000 001111
Q ss_pred HHHHHHhHHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEE
Q 046033 79 IEAFDAAKPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVA 123 (434)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~ 123 (434)
...+.+.++..++|+||.-....-...++...|+|...
T Consensus 69 -------~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 69 -------RRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------HHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -------HHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 12344677778999999433445566788888999743
No 57
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=95.17 E-value=2.5 Score=40.85 Aligned_cols=109 Identities=11% Similarity=0.028 Sum_probs=70.9
Q ss_pred cEEEecccCHH---HHhcccCcceEEe---ccCcch-HHHHHHhC---CcEEeccCCCChhhHHHHHHhhceeeeecccc
Q 046033 305 GMVVQGWAPQA---KILGHGSIGGFIS---HCGWGS-TVEGIMYG---VPIIAVPMVLDQLFNAKMVADIGVGLEVPRDE 374 (434)
Q Consensus 305 ~v~~~~~~p~~---~il~~~~~~~~I~---hgG~~s-~~eal~~G---vP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~ 374 (434)
.+.+...+++. +++..+++ +|. .=|+|. ..|++++| .|.|+--+.+- +..+. .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa----~~~l~--~~allVnP-- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCGA----AEVLG--EYCRSVNP-- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT----HHHHG--GGSEEECT--
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCCC----HHHhC--CCEEEECC--
Confidence 46666777775 45555666 663 457774 58999996 67666544332 11111 14677764
Q ss_pred cCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHh
Q 046033 375 INQRVRKEELARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 428 (434)
Q Consensus 375 ~~~~~~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~ 428 (434)
.+.++++++|.++|+.. ..+-+++.+++.+.+.+.. ..=+..+++.|..
T Consensus 423 ----~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 ----FDLVEQAEAISAALAAG-PRQRAEAAARRRDAARPWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp ----TBHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh
Confidence 47999999999999842 2456777778888887766 5556666766654
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=94.90 E-value=0.91 Score=41.25 Aligned_cols=135 Identities=13% Similarity=0.035 Sum_probs=72.6
Q ss_pred CCceEEEEecCcc---cCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEeccc---C
Q 046033 240 PSSVVYVSFGSEY---FLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWA---P 313 (434)
Q Consensus 240 ~~~vV~vs~Gs~~---~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~---p 313 (434)
+++.|.+..|+.. .++.+.+.++++.+.+.+.++++..+.+ .+ ....+++.+..+++.+.+-. .
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~-~e---------~~~~~~i~~~~~~~~l~g~~sl~e 246 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP-HE---------EERAKRLAEGFAYVEVLPKMSLEG 246 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH-HH---------HHHHHHHHTTCTTEEECCCCCHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH-HH---------HHHHHHHHhhCCcccccCCCCHHH
Confidence 3568888888754 2667888889888876666654442211 00 01111111112234333222 2
Q ss_pred HHHHhcccCcceEEeccCcchHHHHHHhCCcEEec--cCCCChhhHHHHHHhhcee-eeec-ccccCCcccHHHHHHHHH
Q 046033 314 QAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAV--PMVLDQLFNAKMVADIGVG-LEVP-RDEINQRVRKEELARVFK 389 (434)
Q Consensus 314 ~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~--P~~~dq~~na~~~~~~G~g-~~~~-~~~~~~~~~~~~l~~~v~ 389 (434)
..+++.++++ +|+.- .|++.=|.+.|+|+|++ |..... + .=.|-. ..+. ...-...++++++.+++.
T Consensus 247 l~ali~~a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~--~----~P~~~~~~~~~~~~~cm~~I~~~~V~~~i~ 317 (326)
T 2gt1_A 247 VARVLAGAKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPGL--I----GGYGKNQMVCRAPGNELSQLTANAVKQFIE 317 (326)
T ss_dssp HHHHHHTCSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHHH--H----CCCSSSEEEEECGGGCGGGCCHHHHHHHHH
T ss_pred HHHHHHhCCE--EEecC-CcHHHHHHHcCCCEEEEECCCChhh--c----CCCCCCceEecCCcccccCCCHHHHHHHHH
Confidence 2377776666 99882 34444477799999988 332111 0 001111 1111 001134579999999999
Q ss_pred HHhc
Q 046033 390 QVVE 393 (434)
Q Consensus 390 ~ll~ 393 (434)
++|+
T Consensus 318 ~~l~ 321 (326)
T 2gt1_A 318 ENAE 321 (326)
T ss_dssp HTTT
T ss_pred HHHH
Confidence 9998
No 59
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=92.16 E-value=2 Score=41.53 Aligned_cols=108 Identities=12% Similarity=0.090 Sum_probs=65.9
Q ss_pred EE-EecccCHH---HHhcccCcceEEe---ccCcc-hHHHHHHhCC-----cEEeccCCCChhhHHHHHHhhceeeeecc
Q 046033 306 MV-VQGWAPQA---KILGHGSIGGFIS---HCGWG-STVEGIMYGV-----PIIAVPMVLDQLFNAKMVADIGVGLEVPR 372 (434)
Q Consensus 306 v~-~~~~~p~~---~il~~~~~~~~I~---hgG~~-s~~eal~~Gv-----P~v~~P~~~dq~~na~~~~~~G~g~~~~~ 372 (434)
+. +..++++. .++..+++ +|. .=|+| +..||+++|+ |+|+....+--.. + .-|+.+++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~----l---~~g~lv~p 403 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE----L---TSALIVNP 403 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT----C---TTSEEECT
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH----h---CCeEEECC
Confidence 44 45777776 44555666 664 33554 7899999998 6666543321111 1 13566653
Q ss_pred cccCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHhh
Q 046033 373 DEINQRVRKEELARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQL 429 (434)
Q Consensus 373 ~~~~~~~~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~~ 429 (434)
.+.++++++|.++|+++ ....+++.+++.+.+++.. ..-+..+++.+.+.
T Consensus 404 ------~d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 404 ------YDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp ------TCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred ------CCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 37899999999999831 1234555566666666655 44555666665443
No 60
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=88.29 E-value=1.7 Score=37.78 Aligned_cols=99 Identities=18% Similarity=0.266 Sum_probs=54.8
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHHHhH
Q 046033 7 YLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFDAAK 86 (434)
Q Consensus 7 ~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (434)
..+|+++|.+.| +|+++.+...+..+-... ++...+++..+... . ...-.+-+.+.. .
T Consensus 17 i~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si--T~~~pl~~~~~~~~----~-----~~~v~GTPaDCV-----~----- 74 (251)
T 2wqk_A 17 INALREALKSLG-RVVVVAPDRNLSGVGHSL--TFTEPLKMRKIDTD----F-----YTVIDGTPADCV-----H----- 74 (251)
T ss_dssp HHHHHHHHTTTS-EEEEEEESSCCTTSCCSC--CCSSCEEEEEEETT----E-----EEETTCCHHHHH-----H-----
T ss_pred HHHHHHHHHhCC-CEEEEeeCCCCcccccCc--CCCCCceeEEeecc----c-----eeecCCChHHHH-----h-----
Confidence 456799999998 599888877766554321 11234555444111 0 000001111111 1
Q ss_pred HHHHHHHhhcCCCEEEEc----------CCCc---hHHHHHHHcCCcEEEEecc
Q 046033 87 PAFCNVLETLKPTLVIYD----------LFQP---WAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 87 ~~~~~~l~~~~pDlVi~d----------~~~~---~~~~~A~~~giP~v~~~~~ 127 (434)
=.+..++.+.+||+||+. .+.. +|+.-|..+|||.|.++..
T Consensus 75 lal~~~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 75 LGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp HHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hhhhhhcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 123356667799999993 2222 4455556689999999854
No 61
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=87.40 E-value=7.8 Score=31.52 Aligned_cols=132 Identities=13% Similarity=0.046 Sum_probs=65.7
Q ss_pred hhhhhhhcCCCCCceEEEEecC-cccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEE
Q 046033 229 TKIMDWLSRKEPSSVVYVSFGS-EYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMV 307 (434)
Q Consensus 229 ~~~~~~l~~~~~~~vV~vs~Gs-~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~ 307 (434)
.++-++|.... ...|+.|. .+ ......++..+.+-+++-++... + +..+.. .-....
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~--~-----~~~~~~-------~~~~~i 92 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP--D-----TSEISD-------AVDIPI 92 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC------------CCT-------TCSEEE
T ss_pred HHHHHHHHHCC---CEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch--h-----hhhhcc-------CCceeE
Confidence 44555665532 66666665 43 33444445545565666665421 0 001110 111233
Q ss_pred EecccCHH-HHh-cccCcceEEeccCcchHHH---HHHhCCcEEeccCCCChhhHHHHHHhhce-eeeecccccCCcccH
Q 046033 308 VQGWAPQA-KIL-GHGSIGGFISHCGWGSTVE---GIMYGVPIIAVPMVLDQLFNAKMVADIGV-GLEVPRDEINQRVRK 381 (434)
Q Consensus 308 ~~~~~p~~-~il-~~~~~~~~I~hgG~~s~~e---al~~GvP~v~~P~~~dq~~na~~~~~~G~-g~~~~~~~~~~~~~~ 381 (434)
+..+.+.. .++ ..++ ..++--||.||+-| ++.+++|++++|.+. .....+...-. .+.+. -++
T Consensus 93 ~~~~~~~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~-------~~~ 161 (176)
T 2iz6_A 93 VTGLGSARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVA-------ADV 161 (176)
T ss_dssp ECCCCSSSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEE-------SSH
T ss_pred EcCCHHHHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEc-------CCH
Confidence 44555443 333 3334 34667788887655 567999999999832 11111111111 12221 267
Q ss_pred HHHHHHHHHHhc
Q 046033 382 EELARVFKQVVE 393 (434)
Q Consensus 382 ~~l~~~v~~ll~ 393 (434)
+++.+.+.+.++
T Consensus 162 ~e~~~~l~~~~~ 173 (176)
T 2iz6_A 162 AGAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888777777665
No 62
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=86.00 E-value=6.6 Score=39.42 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=25.0
Q ss_pred HHhcccCcceEEecc---Cc-chHHHHHHhCCcEEeccCC
Q 046033 316 KILGHGSIGGFISHC---GW-GSTVEGIMYGVPIIAVPMV 351 (434)
Q Consensus 316 ~il~~~~~~~~I~hg---G~-~s~~eal~~GvP~v~~P~~ 351 (434)
.++..+++ +|.-. |+ .+.+||+++|+|+|+.-..
T Consensus 514 ~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 514 EFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp HHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred HHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 56666666 87543 44 5899999999999987543
No 63
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=79.45 E-value=8.3 Score=32.00 Aligned_cols=112 Identities=11% Similarity=0.092 Sum_probs=64.4
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCC--------CCCCC-----CCC
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELH--------DPYNH-----TTK 68 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~--------~~~~~-----~~~ 68 (434)
|.+.-.+++|++| +.|.+|. ++.......+++. .++..+.++.. +++ ..+.. .+.
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVI-ISRGgta~~lr~~------~~iPVV~I~~s----~~Dil~al~~a~~~~~kIavvg~~ 103 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAI-ISRGATSDYIKKS------VSIPSISIKVT----RFDTMRAVYNAKRFGNELALIAYK 103 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEE-EEEHHHHHHHHTT------CSSCEEEECCC----HHHHHHHHHHHGGGCSEEEEEEES
T ss_pred CCHHHHHHHHHHh-cCCCeEE-EECChHHHHHHHh------CCCCEEEEcCC----HhHHHHHHHHHHhhCCcEEEEeCc
Confidence 4566678899999 8899976 4444555555553 34555555222 111 00000 000
Q ss_pred CCccccHHHHHHHHH-----------HhHHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecchH
Q 046033 69 NIPRHLIPTLIEAFD-----------AAKPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIAA 129 (434)
Q Consensus 69 ~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~ 129 (434)
.. ......+...+. .......+-+++.+.|+||.+ ..+...|+++|+|.+.+.+...
T Consensus 104 ~~-~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~---~~~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 104 HS-IVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSG---KTVTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp SC-SSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEEC---HHHHHHHHHTTCEEEECCCCHH
T ss_pred ch-hhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECC---HHHHHHHHHcCCcEEEEecCHH
Confidence 00 011233333332 123445556666799999999 4579999999999999877543
No 64
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=77.51 E-value=6.3 Score=34.07 Aligned_cols=99 Identities=18% Similarity=0.293 Sum_probs=54.2
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHHHhH
Q 046033 7 YLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFDAAK 86 (434)
Q Consensus 7 ~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (434)
..+|+++|++.| +|+++.+...+.-+-... ++...+++..+.. +.. . .-.+-+.+.. .
T Consensus 17 i~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si--t~~~pl~~~~~~~-----~~~-~---~v~GTPaDCV-----~----- 74 (251)
T 2phj_A 17 INALREALKSLG-RVVVVAPDRNLSGVGHSL--TFTEPLKMRKIDT-----DFY-T---VIDGTPADCV-----H----- 74 (251)
T ss_dssp HHHHHHHHTTTS-EEEEEEESSCCTTSCCSC--CCSSCEEEEEEET-----TEE-E---ETTCCHHHHH-----H-----
T ss_pred HHHHHHHHHhcC-CEEEEecCCCccCCccce--ecCCCeEEEEecC-----CCe-E---EECCCHHHHH-----H-----
Confidence 467899999988 999999987776655421 1123455544410 000 0 0000001111 1
Q ss_pred HHHHHHHhhcCCCEEEEc----------CCCch---HHHHHHHcCCcEEEEecc
Q 046033 87 PAFCNVLETLKPTLVIYD----------LFQPW---AAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 87 ~~~~~~l~~~~pDlVi~d----------~~~~~---~~~~A~~~giP~v~~~~~ 127 (434)
=.+..++...+||+||+. .+..+ |+.-|..+|||.|.++..
T Consensus 75 lal~~l~~~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 75 LGYRVILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp HHHHTTTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHhcCCCCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 123344544689999985 22223 344455689999999864
No 65
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=77.25 E-value=6.2 Score=37.73 Aligned_cols=35 Identities=14% Similarity=0.050 Sum_probs=29.3
Q ss_pred HHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEe
Q 046033 88 AFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~ 125 (434)
.+++++++.+||++|.+.. ...+|+++|||++.++
T Consensus 366 ~le~~i~~~~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 DLEHAARAGQAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp HHHHHHHHHTCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred HHHHHHHhcCCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 4667888899999999954 6789999999999754
No 66
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=71.46 E-value=6.2 Score=30.87 Aligned_cols=87 Identities=13% Similarity=0.201 Sum_probs=55.0
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHHHh
Q 046033 6 PYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFDAA 85 (434)
Q Consensus 6 p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
-++.+|+.|.+.|+++. +++...+.+.+ .|+....+... +++ .. ...
T Consensus 38 ~l~~~a~~l~~lGf~i~--AT~GTa~~L~~-------~Gi~v~~v~k~------~eg-g~-----------------~~~ 84 (143)
T 2yvq_A 38 RFLGVAEQLHNEGFKLF--ATEATSDWLNA-------NNVPATPVAWP------SQE-GQ-----------------NPS 84 (143)
T ss_dssp HHHHHHHHHHTTTCEEE--EEHHHHHHHHH-------TTCCCEEECCG------GGC-----------------------
T ss_pred HHHHHHHHHHHCCCEEE--ECchHHHHHHH-------cCCeEEEEEec------cCC-Cc-----------------ccc
Confidence 46788999999999753 33444567777 67777666211 111 00 000
Q ss_pred HHHHHHHHhhcCCCEEEEcCCC--------chHHHHHHHcCCcEEEEe
Q 046033 86 KPAFCNVLETLKPTLVIYDLFQ--------PWAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 86 ~~~~~~~l~~~~pDlVi~d~~~--------~~~~~~A~~~giP~v~~~ 125 (434)
.+.+.+.+++.+.|+||..... +.....|-..|||+++..
T Consensus 85 ~~~i~d~i~~g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~~ 132 (143)
T 2yvq_A 85 LSSIRKLIRDGSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTNF 132 (143)
T ss_dssp CBCHHHHHHTTSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECSH
T ss_pred cccHHHHHHCCCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcCH
Confidence 1456688999999999987432 134566778899999643
No 67
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=69.96 E-value=45 Score=27.47 Aligned_cols=97 Identities=13% Similarity=0.091 Sum_probs=52.5
Q ss_pred chhhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEE
Q 046033 228 DTKIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMV 307 (434)
Q Consensus 228 ~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~ 307 (434)
-.++-++|.+.. ...|+.|.. .......++..+.+-++|-++... .. +. ......
T Consensus 47 A~~lg~~LA~~G---~~vVsGg~~-----GiM~aa~~gAl~~GG~~iGVlP~e-~~--------~~--------~~~~~~ 101 (195)
T 1rcu_A 47 CLELGRTLAKKG---YLVFNGGRD-----GVMELVSQGVREAGGTVVGILPDE-EA--------GN--------PYLSVA 101 (195)
T ss_dssp HHHHHHHHHHTT---CEEEECCSS-----HHHHHHHHHHHHTTCCEEEEESTT-CC--------CC--------TTCSEE
T ss_pred HHHHHHHHHHCC---CEEEeCCHH-----HHHHHHHHHHHHcCCcEEEEeCCc-cc--------CC--------CCccee
Confidence 344555666542 556664433 344555566556666777766431 11 00 111233
Q ss_pred Ee--cccC-HHH-HhcccCcceEEeccCcchHHH---HHHhCCcEEeccC
Q 046033 308 VQ--GWAP-QAK-ILGHGSIGGFISHCGWGSTVE---GIMYGVPIIAVPM 350 (434)
Q Consensus 308 ~~--~~~p-~~~-il~~~~~~~~I~hgG~~s~~e---al~~GvP~v~~P~ 350 (434)
+. ...+ -.. +...++ ..++--||.||+-| ++.+|+|+++++.
T Consensus 102 ~~~~~~f~~Rk~~m~~~sd-a~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 102 VKTGLDFQMRSFVLLRNAD-VVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp EECCCCHHHHHHHHHTTCS-EEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred eecCCCHHHHHHHHHHhCC-EEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 32 2333 233 334445 35667888887655 5779999999963
No 68
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=68.32 E-value=39 Score=26.04 Aligned_cols=26 Identities=12% Similarity=-0.041 Sum_probs=21.8
Q ss_pred hHHHHHHHHHHHhCCCEEEEEeCCCch
Q 046033 4 ITPYLALAKKLSQQNFHIYFCSTPINL 30 (434)
Q Consensus 4 ~~p~l~lA~~L~~~Gh~V~~~~~~~~~ 30 (434)
+.|++.+++.|.++|.+|+++ .....
T Consensus 30 iaPl~sm~~~l~~~~~~v~l~-g~R~~ 55 (142)
T 3lyu_A 30 IVEVYPIAKAWQEIGNDVTTL-HVTFE 55 (142)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE-EEEEG
T ss_pred HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 579999999999999999998 54433
No 69
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=66.60 E-value=15 Score=35.08 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=28.6
Q ss_pred HHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEe
Q 046033 88 AFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~ 125 (434)
++.+++++.+||++|.+. ....+|+++|||++.+.
T Consensus 376 ~l~~~i~~~~pDl~ig~~---~~~~~a~k~gip~~~~~ 410 (458)
T 1mio_B 376 DVHQWIKNEGVDLLISNT---YGKFIAREENIPFVRFG 410 (458)
T ss_dssp HHHHHHHHSCCSEEEESG---GGHHHHHHHTCCEEECS
T ss_pred HHHHHHHhcCCCEEEeCc---chHHHHHHcCCCEEEee
Confidence 456788888999999985 35788999999999753
No 70
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=65.43 E-value=5.6 Score=34.67 Aligned_cols=53 Identities=13% Similarity=0.238 Sum_probs=39.4
Q ss_pred CcceEEeccCcchHHHHHHh---CCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhcc
Q 046033 322 SIGGFISHCGWGSTVEGIMY---GVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 322 ~~~~~I~hgG~~s~~eal~~---GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~ 394 (434)
.++++|+-||=||+.+++.. ++|++.++... +|.-. .+.++++.++++.++++
T Consensus 41 ~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~G~-------------~Gfl~-------~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADLIVVVGGDGTVLKAAKKAADGTPMVGFKAGR-------------LGFLT-------SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSEEEEEECHHHHHHHHTTBCTTCEEEEEESSS-------------CCSSC-------CBCGGGHHHHHHHHHTT
T ss_pred CCCEEEEEeCcHHHHHHHHHhCCCCCEEEEECCC-------------CCccC-------cCCHHHHHHHHHHHHcC
Confidence 34669999999999999876 89999986321 12222 24688888999988884
No 71
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=64.44 E-value=6.5 Score=34.57 Aligned_cols=53 Identities=17% Similarity=0.186 Sum_probs=37.8
Q ss_pred CcceEEeccCcchHHHHHHh------CCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhcc
Q 046033 322 SIGGFISHCGWGSTVEGIMY------GVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 322 ~~~~~I~hgG~~s~~eal~~------GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~ 394 (434)
.++++|.-||=||+.+++.. ++|++.+|.. . .|. ...+.++++.++++.++++
T Consensus 35 ~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~--lgf-------l~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 35 EPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H--LGF-------YADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S--CCS-------SCCBCGGGHHHHHHHHHTT
T ss_pred CCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C--CCc-------CCcCCHHHHHHHHHHHHcC
Confidence 34669999999999999765 8999999751 0 121 1224577788888888774
No 72
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=59.88 E-value=5.5 Score=31.04 Aligned_cols=29 Identities=17% Similarity=0.343 Sum_probs=25.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCchhhhhh
Q 046033 7 YLALAKKLSQQNFHIYFCSTPINLQSMSQ 35 (434)
Q Consensus 7 ~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~ 35 (434)
++=++..|+.+||+|++++++.....++-
T Consensus 25 ~lYl~~~Lk~~G~~v~VA~npAAlkLlev 53 (157)
T 1kjn_A 25 AIYTSHKLKKKGFRVTVTANPAALRLVQV 53 (157)
T ss_dssp HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeeEEecCHHHHhheec
Confidence 45678999999999999999988888875
No 73
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=58.65 E-value=26 Score=33.97 Aligned_cols=34 Identities=12% Similarity=0.268 Sum_probs=27.0
Q ss_pred HHHHHHhhcCCCEEEEcCCCchHHHHHHHc-------CCcEEEE
Q 046033 88 AFCNVLETLKPTLVIYDLFQPWAAEAAYQH-------DIAAVAF 124 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~-------giP~v~~ 124 (434)
++.+++++.+||++|.+.. ...+|+++ |||++.+
T Consensus 425 ~l~~~i~~~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFTRQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHHCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhhcCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 4557778889999999953 57778888 9999865
No 74
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=58.08 E-value=60 Score=27.23 Aligned_cols=86 Identities=10% Similarity=0.050 Sum_probs=44.6
Q ss_pred cEEEecccCHH-HHh-cccCcceEEeccCcchHHHHH---------HhCCcEEeccC--CCChhh-HHHHHHhhceeeee
Q 046033 305 GMVVQGWAPQA-KIL-GHGSIGGFISHCGWGSTVEGI---------MYGVPIIAVPM--VLDQLF-NAKMVADIGVGLEV 370 (434)
Q Consensus 305 ~v~~~~~~p~~-~il-~~~~~~~~I~hgG~~s~~eal---------~~GvP~v~~P~--~~dq~~-na~~~~~~G~g~~~ 370 (434)
++.+.+.++.. .++ ..++ ..++--||.||+-|.. .+++|++++-. ++|... +...+.+.|.=-.-
T Consensus 88 ~~~~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~ 166 (216)
T 1ydh_A 88 DVRVVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPG 166 (216)
T ss_dssp EEEEESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHH
T ss_pred cccccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChH
Confidence 35455555443 333 3444 3577889999988776 47999999853 334322 22444444431000
Q ss_pred cccccCCcccHHHHHHHHHHH
Q 046033 371 PRDEINQRVRKEELARVFKQV 391 (434)
Q Consensus 371 ~~~~~~~~~~~~~l~~~v~~l 391 (434)
..+...-.-+++++.+.+.+.
T Consensus 167 ~~~~~~~~d~~ee~~~~l~~~ 187 (216)
T 1ydh_A 167 ARNIVVSAPTAKELMEKMEEY 187 (216)
T ss_dssp HHTTEEEESSHHHHHHHHHHC
T ss_pred HcCeEEEeCCHHHHHHHHHHh
Confidence 000000012677777777653
No 75
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=56.98 E-value=95 Score=26.74 Aligned_cols=32 Identities=19% Similarity=0.172 Sum_probs=24.4
Q ss_pred CCCEEE-EcC-CCchHHHHHHHcCCcEEEEecch
Q 046033 97 KPTLVI-YDL-FQPWAAEAAYQHDIAAVAFVTIA 128 (434)
Q Consensus 97 ~pDlVi-~d~-~~~~~~~~A~~~giP~v~~~~~~ 128 (434)
.||+|| .|. ....++.=|.++|||+|.+.-+.
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 699886 553 44578888999999999886543
No 76
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=55.95 E-value=84 Score=26.46 Aligned_cols=155 Identities=12% Similarity=0.005 Sum_probs=73.1
Q ss_pred hhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccC
Q 046033 234 WLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAP 313 (434)
Q Consensus 234 ~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p 313 (434)
|++-. .++++.|+.|.++ ...+..|.+.|..+.++... +.+.+..-. ...++.....-.
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-----------~~~~l~~l~--~~~~i~~i~~~~ 84 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-----------VSAEINEWE--AKGQLRVKRKKV 84 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-----------CCHHHHHHH--HTTSCEEECSCC
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-----------CCHHHHHHH--HcCCcEEEECCC
Confidence 44443 3568888776443 44556677778877665321 111121111 112233222111
Q ss_pred HHHHhcccCcceEEeccCcchHHHHHH----hCCcEEeccCCCC-hhhHHHHHHhhceeeeecccccCCcccHHHHHHHH
Q 046033 314 QAKILGHGSIGGFISHCGWGSTVEGIM----YGVPIIAVPMVLD-QLFNAKMVADIGVGLEVPRDEINQRVRKEELARVF 388 (434)
Q Consensus 314 ~~~il~~~~~~~~I~hgG~~s~~eal~----~GvP~v~~P~~~d-q~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v 388 (434)
....+.. ++++|..-|.-.+.+.++ .|+|+-++-.... .+..-..+.+-++-+.+..+. ..-.-+..|++.|
T Consensus 85 ~~~dL~~--adLVIaAT~d~~~N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G-~sP~la~~iR~~i 161 (223)
T 3dfz_A 85 GEEDLLN--VFFIVVATNDQAVNKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDG-ASPLLTKRIKEDL 161 (223)
T ss_dssp CGGGSSS--CSEEEECCCCTHHHHHHHHHSCTTCEEEC-----CCSEECCEEEEETTEEEEEECTT-SCHHHHHHHHHHH
T ss_pred CHhHhCC--CCEEEECCCCHHHHHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCC-CCcHHHHHHHHHH
Confidence 2233453 444887777654444433 5677644421110 011111222223444443211 1112345677777
Q ss_pred HHHhcccchHHHHHHHHHHHHHHHh
Q 046033 389 KQVVEQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 389 ~~ll~~~~~~~~~~~a~~l~~~~~~ 413 (434)
++++.. +-..+-+.+.++++.+++
T Consensus 162 e~~lp~-~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 162 SSNYDE-SYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHSCT-HHHHHHHHHHHHHHHHHH
T ss_pred HHHccH-HHHHHHHHHHHHHHHHHH
Confidence 777752 135678888888888876
No 77
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=54.66 E-value=14 Score=37.74 Aligned_cols=110 Identities=11% Similarity=0.037 Sum_probs=67.7
Q ss_pred EecccCHHHHhcccCcceEEeccCcchHHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeeccccc---CCcccHHHH
Q 046033 308 VQGWAPQAKILGHGSIGGFISHCGWGSTVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEI---NQRVRKEEL 384 (434)
Q Consensus 308 ~~~~~p~~~il~~~~~~~~I~hgG~~s~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~---~~~~~~~~l 384 (434)
+.++.+-.++|..+++ +||= =.+.+.|.+..++|+|....-.|++..- ..|. ..+..+. .-.-+.++|
T Consensus 603 ~~~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~----~rg~--y~d~~~~~pg~~~~~~~eL 673 (729)
T 3l7i_A 603 VSNYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDKG----LRGF--YMNYMEDLPGPIYTEPYGL 673 (729)
T ss_dssp CTTCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTSS----CCSB--SSCTTSSSSSCEESSHHHH
T ss_pred CCCCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhhc----cCCc--ccChhHhCCCCeECCHHHH
Confidence 3345566678876665 8876 3578899999999999997655654331 1122 2111000 011378899
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHh
Q 046033 385 ARVFKQVVEQEEGQQIKRKAKELSESIKKKG-DDEEINVVEKLLQ 428 (434)
Q Consensus 385 ~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~-~~~~~~~ve~l~~ 428 (434)
.++|.....+ +..|+++.+++.+.+-... -.+.+++++.+.+
T Consensus 674 ~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~ 716 (729)
T 3l7i_A 674 AKELKNLDKV--QQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHK 716 (729)
T ss_dssp HHHHTTHHHH--HHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHH
T ss_pred HHHHhhhhcc--chhHHHHHHHHHHHhCCccCChHHHHHHHHHHh
Confidence 9999888763 4678888888888886432 2334444444433
No 78
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=53.20 E-value=19 Score=24.41 Aligned_cols=50 Identities=18% Similarity=0.174 Sum_probs=36.2
Q ss_pred HHhCCcEEeccCCCChhh---HHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhc
Q 046033 339 IMYGVPIIAVPMVLDQLF---NAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVE 393 (434)
Q Consensus 339 l~~GvP~v~~P~~~dq~~---na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~ 393 (434)
--+|+|.+++-..+.|.. .-....+.|+...+. ++-+++++...+++.|.
T Consensus 48 kdngkplvvfvngasqndvnefqneakkegvsydvl-----kstdpeeltqrvreflk 100 (112)
T 2lnd_A 48 KDNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVL-----KSTDPEELTQRVREFLK 100 (112)
T ss_dssp TTCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEE-----ECCCHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEecCcccccHHHHHHHHHhcCcchhhh-----ccCCHHHHHHHHHHHHH
Confidence 347999999877776643 233455568887775 45689999999999885
No 79
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=52.84 E-value=86 Score=26.57 Aligned_cols=31 Identities=19% Similarity=0.233 Sum_probs=23.2
Q ss_pred CCCEEE-EcC-CCchHHHHHHHcCCcEEEEecc
Q 046033 97 KPTLVI-YDL-FQPWAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 97 ~pDlVi-~d~-~~~~~~~~A~~~giP~v~~~~~ 127 (434)
.||+|| .|+ ....++.=|.++|||+|.+.-+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 499886 554 3456788889999999987644
No 80
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=52.52 E-value=17 Score=31.05 Aligned_cols=22 Identities=9% Similarity=0.211 Sum_probs=19.1
Q ss_pred HHHHHHHHhCCCEEEEEeCCCc
Q 046033 8 LALAKKLSQQNFHIYFCSTPIN 29 (434)
Q Consensus 8 l~lA~~L~~~Gh~V~~~~~~~~ 29 (434)
.++|++|.++|++|++++.+..
T Consensus 33 ~aiA~~~~~~Ga~V~lv~~~~~ 54 (232)
T 2gk4_A 33 KIITETLLSAGYEVCLITTKRA 54 (232)
T ss_dssp HHHHHHHHHTTCEEEEEECTTS
T ss_pred HHHHHHHHHCCCEEEEEeCCcc
Confidence 4789999999999999998743
No 81
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=52.02 E-value=92 Score=25.07 Aligned_cols=114 Identities=10% Similarity=-0.004 Sum_probs=60.7
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccC-chhHHHhhcCCCCcEEE---ecccCHHH
Q 046033 241 SSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEAL-PQGFAEEIQGNNKGMVV---QGWAPQAK 316 (434)
Q Consensus 241 ~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~v~~---~~~~p~~~ 316 (434)
+++++.-.|+.+.. ....+++.|.+.|..+-+++..... ..+ |+.+. .. .. .++. ..|+++..
T Consensus 6 k~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~------~fi~~~~l~-~l--~~-~v~~~~~~~~~~hi~ 72 (175)
T 3qjg_A 6 ENVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGR------KFINGEILK-QF--CD-NYYDEFEDPFLNHVD 72 (175)
T ss_dssp CEEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGG------GGSCHHHHH-HH--CS-CEECTTTCTTCCHHH
T ss_pred CEEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHH------HHhhHHHHH-Hh--cC-CEEecCCCCcccccc
Confidence 45777777776653 3455677787778776666543211 112 22222 11 11 2221 13455555
Q ss_pred HhcccCcceEEeccCcchHH-------------HHHHhCCcEEeccC-------CCChhhHHHHHHhhceee
Q 046033 317 ILGHGSIGGFISHCGWGSTV-------------EGIMYGVPIIAVPM-------VLDQLFNAKMVADIGVGL 368 (434)
Q Consensus 317 il~~~~~~~~I~hgG~~s~~-------------eal~~GvP~v~~P~-------~~dq~~na~~~~~~G~g~ 368 (434)
+...++. .+|.-+-+||+. -++..++|++++|. +.=...|...+.+.|+=+
T Consensus 73 l~~~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~i 143 (175)
T 3qjg_A 73 IANKHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDYGVSI 143 (175)
T ss_dssp HHHTCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHTTCEE
T ss_pred ccchhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHCCCEE
Confidence 4444453 344433333322 35677999999993 222356777788777643
No 82
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=51.33 E-value=11 Score=33.77 Aligned_cols=52 Identities=19% Similarity=0.312 Sum_probs=36.6
Q ss_pred cceEEeccCcchHHHHHHh----CCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhcc
Q 046033 323 IGGFISHCGWGSTVEGIMY----GVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 323 ~~~~I~hgG~~s~~eal~~----GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~ 394 (434)
++++|.-||=||+.+++.. ++|++.++... +|.-. .+.++++.++++.++++
T Consensus 76 ~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G~-------------~gfl~-------~~~~~~~~~~~~~i~~g 131 (307)
T 1u0t_A 76 CELVLVLGGDGTFLRAAELARNASIPVLGVNLGR-------------IGFLA-------EAEAEAIDAVLEHVVAQ 131 (307)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHTCCEEEEECSS-------------CCSSC-------SEEGGGHHHHHHHHHHT
T ss_pred CCEEEEEeCCHHHHHHHHHhccCCCCEEEEeCCC-------------CccCc-------ccCHHHHHHHHHHHHcC
Confidence 4559999999999999854 89999997421 22111 23567777788887773
No 83
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=51.28 E-value=1e+02 Score=25.35 Aligned_cols=82 Identities=9% Similarity=-0.053 Sum_probs=46.0
Q ss_pred hHHHHHHHHHHHhCCCEEEEEeCCCc------hhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHH
Q 046033 4 ITPYLALAKKLSQQNFHIYFCSTPIN------LQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPT 77 (434)
Q Consensus 4 ~~p~l~lA~~L~~~Gh~V~~~~~~~~------~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (434)
..-++.+|...+.+|+.|.|+..-.. .+.+.. -+++++... .++.-. ......
T Consensus 42 TTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~-------L~v~~~~~g-----~gf~~~---------~~~~~~ 100 (196)
T 1g5t_A 42 TTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP-------HGVEFQVMA-----TGFTWE---------TQNREA 100 (196)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG-------GTCEEEECC-----TTCCCC---------GGGHHH
T ss_pred HHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh-------CCcEEEEcc-----cccccC---------CCCcHH
Confidence 34566777777888999999955432 122333 347776651 122100 111112
Q ss_pred HHHHHHHhHHHHHHHHhhcCCCEEEEcCC
Q 046033 78 LIEAFDAAKPAFCNVLETLKPTLVIYDLF 106 (434)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~~pDlVi~d~~ 106 (434)
-............+.+.+.++|+||.|-+
T Consensus 101 ~~~~a~~~l~~a~~~l~~~~yDlvILDEi 129 (196)
T 1g5t_A 101 DTAACMAVWQHGKRMLADPLLDMVVLDEL 129 (196)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCSEEEEETH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 22333344455666677778999999954
No 84
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=50.22 E-value=92 Score=25.71 Aligned_cols=56 Identities=13% Similarity=0.074 Sum_probs=39.0
Q ss_pred HHhCCcEEecc----CCCChhhHHHHHHhhceeeeeccc--c---cCCc--ccHHHHHHHHHHHhcc
Q 046033 339 IMYGVPIIAVP----MVLDQLFNAKMVADIGVGLEVPRD--E---INQR--VRKEELARVFKQVVEQ 394 (434)
Q Consensus 339 l~~GvP~v~~P----~~~dq~~na~~~~~~G~g~~~~~~--~---~~~~--~~~~~l~~~v~~ll~~ 394 (434)
+..++|++++| ..+..+.|...+.+.|+=+..+.. . +.++ .+.+.+.+.|.++|++
T Consensus 120 Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 120 LRNGKPVVVGISTNDALGLNGINIMRLMATKNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp HHTTCCEEEEEEETTTTTTTHHHHHHHHTSTTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred hhcCCCEEEEECCChhHHHhHHHHHHHHHCCCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhc
Confidence 55799999999 356778899999999865544321 0 0111 2447888999999884
No 85
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=49.99 E-value=25 Score=30.66 Aligned_cols=40 Identities=15% Similarity=0.123 Sum_probs=31.0
Q ss_pred HHHHHHhhcCCCEEEEcCCCc------hHHHHHHHcCCcEEEEecc
Q 046033 88 AFCNVLETLKPTLVIYDLFQP------WAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~~~------~~~~~A~~~giP~v~~~~~ 127 (434)
.+.+++++.+||+|++...+. .+..+|.++|+|++.....
T Consensus 103 ~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 103 ILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 445667777899999884432 7899999999999987654
No 86
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=49.94 E-value=17 Score=35.08 Aligned_cols=36 Identities=14% Similarity=0.038 Sum_probs=29.5
Q ss_pred HHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEe
Q 046033 87 PAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 87 ~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~ 125 (434)
.++.+++++.+||++|.. .....+|+++|||++.+.
T Consensus 407 ~el~~~i~~~~pDL~ig~---~~~~~ia~k~gIP~~~~~ 442 (492)
T 3u7q_A 407 YEFEEFVKRIKPDLIGSG---IKEKFIFQKMGIPFREMH 442 (492)
T ss_dssp HHHHHHHHHHCCSEEEEC---HHHHHHHHHTTCCEEESS
T ss_pred HHHHHHHHhcCCcEEEeC---cchhHHHHHcCCCEEecc
Confidence 456678888999999998 356789999999999643
No 87
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=49.10 E-value=19 Score=27.20 Aligned_cols=39 Identities=8% Similarity=-0.019 Sum_probs=25.6
Q ss_pred HHHHHHhhcCCCEEEEcCCCc--hHHHHHH---HcCCcEEEEec
Q 046033 88 AFCNVLETLKPTLVIYDLFQP--WAAEAAY---QHDIAAVAFVT 126 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~~~--~~~~~A~---~~giP~v~~~~ 126 (434)
+..+++++.+||+||.|...+ .+..+++ ..++|+|.++.
T Consensus 44 eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa 87 (123)
T 2lpm_A 44 EALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG 87 (123)
T ss_dssp HHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred HHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence 344567788999999995544 2344444 35789876653
No 88
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=48.94 E-value=35 Score=31.20 Aligned_cols=27 Identities=15% Similarity=0.262 Sum_probs=20.4
Q ss_pred CcceEEeccCcchH---HHHHHhCCcEEec
Q 046033 322 SIGGFISHCGWGST---VEGIMYGVPIIAV 348 (434)
Q Consensus 322 ~~~~~I~hgG~~s~---~eal~~GvP~v~~ 348 (434)
..+++|++||.-++ ..|...|+|+++.
T Consensus 92 ~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 34459999998765 5567789999874
No 89
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=48.15 E-value=31 Score=26.37 Aligned_cols=40 Identities=13% Similarity=0.087 Sum_probs=27.7
Q ss_pred HHHHhhcCCCEEEEcCCCc--hHHHHHHHc-------CCcEEEEecchH
Q 046033 90 CNVLETLKPTLVIYDLFQP--WAAEAAYQH-------DIAAVAFVTIAA 129 (434)
Q Consensus 90 ~~~l~~~~pDlVi~d~~~~--~~~~~A~~~-------giP~v~~~~~~~ 129 (434)
.+.+++.+||+||.|...+ -+..+++++ .+|++.++....
T Consensus 50 l~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~ 98 (134)
T 3to5_A 50 LPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAK 98 (134)
T ss_dssp HHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCC
T ss_pred HHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCC
Confidence 3466677999999995544 456666543 589888876544
No 90
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=46.87 E-value=51 Score=27.91 Aligned_cols=44 Identities=14% Similarity=0.188 Sum_probs=29.2
Q ss_pred HHHHHHHHhhcCCCEEEEc-C-CCchHHHHHHH----cCCcEEEEecchH
Q 046033 86 KPAFCNVLETLKPTLVIYD-L-FQPWAAEAAYQ----HDIAAVAFVTIAA 129 (434)
Q Consensus 86 ~~~~~~~l~~~~pDlVi~d-~-~~~~~~~~A~~----~giP~v~~~~~~~ 129 (434)
.+.+.++.++++||+||.- + -...+...|+. .|+|+|+++-.+.
T Consensus 53 ~~~~~~~~~~~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~ 102 (283)
T 1qv9_A 53 VEMALDIAEDFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPG 102 (283)
T ss_dssp HHHHHHHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGG
T ss_pred HHHhhhhhhhcCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcc
Confidence 3444566689999988765 2 22345555554 4999999886653
No 91
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=46.36 E-value=48 Score=30.68 Aligned_cols=95 Identities=13% Similarity=0.045 Sum_probs=52.5
Q ss_pred HHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHHHhHHH
Q 046033 9 ALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFDAAKPA 88 (434)
Q Consensus 9 ~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (434)
.+++.|.+.|.+|.+++.+...+...+...+.+..|+++ .+ ...... -.... ...
T Consensus 43 ~l~~~l~~~g~r~liVtd~~~~~~~~~~v~~~L~~g~~~-~~------~~~~~~----------p~~~~--------v~~ 97 (387)
T 3uhj_A 43 KLAAYLAPLGKRALVLIDRVLFDALSERIGKSCGDSLDI-RF------ERFGGE----------CCTSE--------IER 97 (387)
T ss_dssp TTHHHHGGGCSEEEEEECTTTHHHHHHHC------CCEE-EE------EECCSS----------CSHHH--------HHH
T ss_pred HHHHHHHHcCCEEEEEECchHHHHHHHHHHHHHHcCCCe-EE------EEcCCC----------CCHHH--------HHH
Confidence 356677777888998888766554332222222225555 22 111111 01111 223
Q ss_pred HHHHHhhcCCCEEEEc---CCCchHHHHHHHcCCcEEEEecch
Q 046033 89 FCNVLETLKPTLVIYD---LFQPWAAEAAYQHDIAAVAFVTIA 128 (434)
Q Consensus 89 ~~~~l~~~~pDlVi~d---~~~~~~~~~A~~~giP~v~~~~~~ 128 (434)
..+.+++.++|+||+= .....+..+|...++|+|.+.++.
T Consensus 98 ~~~~~~~~~~d~IIavGGGs~~D~AK~iA~~~~~p~i~IPTTa 140 (387)
T 3uhj_A 98 VRKVAIEHGSDILVGVGGGKTADTAKIVAIDTGARIVIAPTIA 140 (387)
T ss_dssp HHHHHHHHTCSEEEEESSHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred HHHHHhhcCCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCcc
Confidence 4456677789999875 223456667777899999887763
No 92
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=46.24 E-value=19 Score=34.96 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=28.5
Q ss_pred HHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEe
Q 046033 88 AFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~ 125 (434)
++.+++++.+||++|.+ .....+|+++|||++.+.
T Consensus 340 el~~~i~~~~pDL~ig~---~~~~~~a~~~giP~~~i~ 374 (525)
T 3aek_B 340 EVEKAIEAAAPELILGT---QMERNIAKKLGLPCAVIS 374 (525)
T ss_dssp HHHHHHHHHCCSEEEEC---HHHHHHHHHHTCCEEECS
T ss_pred HHHHHHhhcCCCEEEec---chhHHHHHHcCCCEEEec
Confidence 45577888899999998 357888999999999743
No 93
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=46.09 E-value=90 Score=25.74 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=27.1
Q ss_pred EEEecccCHH-HHh-cccCcceEEeccCcchHHHHHH---------hCCcEEecc
Q 046033 306 MVVQGWAPQA-KIL-GHGSIGGFISHCGWGSTVEGIM---------YGVPIIAVP 349 (434)
Q Consensus 306 v~~~~~~p~~-~il-~~~~~~~~I~hgG~~s~~eal~---------~GvP~v~~P 349 (434)
.++++..... .++ .+++. .++--||+||+-|... +++|++++-
T Consensus 101 ~i~~~~~~~Rk~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 101 LIVTDTMRERKREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred eEEcCCHHHHHHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 4444554332 333 34443 4667888999888743 589999885
No 94
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=45.95 E-value=15 Score=35.38 Aligned_cols=37 Identities=5% Similarity=0.068 Sum_probs=29.6
Q ss_pred HHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEe
Q 046033 86 KPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 86 ~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~ 125 (434)
..++.+++++.+||++|... ....+|+++|||++.+.
T Consensus 390 ~~el~~~i~~~~pDL~ig~~---~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 390 ARVLLKTVDEYQADILIAGG---RNMYTALKGRVPFLDIN 426 (483)
T ss_dssp HHHHHHHHHHTTCSEEECCG---GGHHHHHHTTCCBCCCC
T ss_pred HHHHHHHHHhcCCCEEEECC---chhHHHHHcCCCEEEec
Confidence 34667788889999999974 46688999999998554
No 95
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=45.63 E-value=32 Score=29.76 Aligned_cols=40 Identities=18% Similarity=0.048 Sum_probs=30.4
Q ss_pred HHHHHHhhcCCCEEEEcCCCc------hHHHHHHHcCCcEEEEecc
Q 046033 88 AFCNVLETLKPTLVIYDLFQP------WAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~~~------~~~~~A~~~giP~v~~~~~ 127 (434)
.+.+++++.+||+|++...+. .+..+|.++|+|.+.....
T Consensus 107 ~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 107 VLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 444566667899999884432 7899999999999987644
No 96
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=45.57 E-value=24 Score=31.86 Aligned_cols=37 Identities=16% Similarity=0.089 Sum_probs=25.5
Q ss_pred HHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecc
Q 046033 91 NVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~ 127 (434)
+.+...+||+||...........-+..|||++.+...
T Consensus 110 E~i~al~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 110 EACVAATPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHhcCCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 5566689999998743223344456779999988643
No 97
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=45.56 E-value=40 Score=24.54 Aligned_cols=40 Identities=13% Similarity=0.239 Sum_probs=26.3
Q ss_pred HHHHHhhcCCCEEEEcCCCc--hHHHHHHHc-------CCcEEEEecch
Q 046033 89 FCNVLETLKPTLVIYDLFQP--WAAEAAYQH-------DIAAVAFVTIA 128 (434)
Q Consensus 89 ~~~~l~~~~pDlVi~d~~~~--~~~~~A~~~-------giP~v~~~~~~ 128 (434)
..+.++..+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 38 al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 38 ALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 33566778999999995443 344444433 58888887654
No 98
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=45.53 E-value=18 Score=35.02 Aligned_cols=35 Identities=6% Similarity=0.143 Sum_probs=29.0
Q ss_pred HHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEe
Q 046033 88 AFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~ 125 (434)
++.+++++.+||++|.+ .....+|+++|||++.++
T Consensus 363 el~~~i~~~~pDl~ig~---~~~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 363 VVGDAIARVEPAAIFGT---QMERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HHHHHHHHHCCSEEEEC---HHHHHHHHHHTCCEEECS
T ss_pred HHHHHHHhcCCCEEEec---cchHHHHHhcCCCeEecc
Confidence 55678888899999998 457788899999999765
No 99
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=45.41 E-value=16 Score=33.47 Aligned_cols=53 Identities=21% Similarity=0.205 Sum_probs=35.7
Q ss_pred CcceEEeccCcchHHHHHH----hCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhcc
Q 046033 322 SIGGFISHCGWGSTVEGIM----YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 322 ~~~~~I~hgG~~s~~eal~----~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~ 394 (434)
.++++|+=||=||++.|+. .++|++.+-.. -+|.-. .++.+++.+++.+++++
T Consensus 108 ~~DlvI~lGGDGT~L~aa~~~~~~~~PvlGiN~G-------------~LGFLt-------~~~~~~~~~~l~~vl~g 164 (365)
T 3pfn_A 108 QIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLG-------------SLGFLT-------PFSFENFQSQVTQVIEG 164 (365)
T ss_dssp TCSEEEEESSTTHHHHHHHHCSSSCCCEEEEESS-------------SCTTTC-------CEESTTHHHHHHHHHHS
T ss_pred CCCEEEEEcChHHHHHHHHHhccCCCCEEEEcCC-------------CCccce-------eecHHHHHHHHHHHHcC
Confidence 4456999999999999976 35898887321 122222 24567777777777763
No 100
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=44.40 E-value=24 Score=34.28 Aligned_cols=36 Identities=11% Similarity=0.111 Sum_probs=27.5
Q ss_pred HHHHHHHhhcCCCEEEEcCCCchHHHHHHHc-------CCcEEEEe
Q 046033 87 PAFCNVLETLKPTLVIYDLFQPWAAEAAYQH-------DIAAVAFV 125 (434)
Q Consensus 87 ~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~-------giP~v~~~ 125 (434)
.++.+++++.+||++|+... ...+|+++ |||++.++
T Consensus 428 ~~l~~~i~~~~pDLlig~s~---~k~~a~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 428 WHLRSLVFTDKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp HHHHHHHHHTCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEECS
T ss_pred HHHHHHHHhcCCCEEEECcc---HHHHHHHhhcccccCCCceEEec
Confidence 35567888889999999954 45567766 99999754
No 101
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=44.24 E-value=30 Score=25.55 Aligned_cols=65 Identities=9% Similarity=-0.021 Sum_probs=42.8
Q ss_pred hcccCcceEEeccCcch---------HHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHH
Q 046033 318 LGHGSIGGFISHCGWGS---------TVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVF 388 (434)
Q Consensus 318 l~~~~~~~~I~hgG~~s---------~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v 388 (434)
+..++| +|.-.|..| +-.|...|+|++++=.++.+. .-..+++.+..++- .+.+.+.++|
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~a~~iV~--------Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAVSSEVVG--------WNPHCIRDAL 104 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHHCSEEEC--------SCHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhhCceecc--------CCHHHHHHHH
Confidence 344444 888888776 567888999999994444331 11224555544444 5889999999
Q ss_pred HHHhc
Q 046033 389 KQVVE 393 (434)
Q Consensus 389 ~~ll~ 393 (434)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 98765
No 102
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=44.23 E-value=32 Score=29.66 Aligned_cols=40 Identities=15% Similarity=0.026 Sum_probs=30.2
Q ss_pred HHHHHHhhcCCCEEEEcCCC------chHHHHHHHcCCcEEEEecc
Q 046033 88 AFCNVLETLKPTLVIYDLFQ------PWAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~~------~~~~~~A~~~giP~v~~~~~ 127 (434)
.+.+++++.+||+|++...+ -.+..+|.++|+|.+.....
T Consensus 104 ~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 104 ILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp HHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 34456666789999988443 27899999999999987644
No 103
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=44.19 E-value=1.2e+02 Score=24.83 Aligned_cols=138 Identities=9% Similarity=-0.070 Sum_probs=71.1
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccC-chhHHHhhcCCCCcEEEecc-----cCH
Q 046033 241 SSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEAL-PQGFAEEIQGNNKGMVVQGW-----APQ 314 (434)
Q Consensus 241 ~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~v~~~~~-----~p~ 314 (434)
+++++.-.|+.+.. ....+++.|.+.|..+-++...... ..+ |+.+ +. ...+++..-| +.+
T Consensus 9 k~IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~A~------~fi~~~~~-~~---l~~~v~~~~~~~~~~~~h 75 (194)
T 1p3y_1 9 KKLLIGICGSISSV---GISSYLLYFKSFFKEIRVVMTKTAE------DLIPAHTV-SY---FCDHVYSEHGENGKRHSH 75 (194)
T ss_dssp CEEEEEECSCGGGG---GTHHHHHHHTTTSSEEEEEECHHHH------HHSCHHHH-GG---GSSEEECTTCSSSCCCCH
T ss_pred CEEEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchhHH------HHHHHHHH-HH---hcCCEeccccccCCCcCc
Confidence 34777777776653 2345566666667766555442210 111 1211 11 1222322112 233
Q ss_pred HHHhcccCcceEEeccCcchHH-------------HHHHhCCcEEeccCC----CC---hhhHHHHHHhhceeeeecccc
Q 046033 315 AKILGHGSIGGFISHCGWGSTV-------------EGIMYGVPIIAVPMV----LD---QLFNAKMVADIGVGLEVPRDE 374 (434)
Q Consensus 315 ~~il~~~~~~~~I~hgG~~s~~-------------eal~~GvP~v~~P~~----~d---q~~na~~~~~~G~g~~~~~~~ 374 (434)
..+...+++ .+|.-+-+||+. -++..++|++++|.- +. ...|...+.+.|+=+. ++..
T Consensus 76 i~l~~~aD~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~iv-~p~~ 153 (194)
T 1p3y_1 76 VEIGRWADI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKDGHIVI-EPVE 153 (194)
T ss_dssp HHHHHHCSE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHHTCEEC-CCBC
T ss_pred ccccccCCE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHCCCEEE-CCCC
Confidence 443344453 345444444332 235678999999952 22 2567778888787433 2222
Q ss_pred c-------------CCcccHHHHHHHHHHHhc
Q 046033 375 I-------------NQRVRKEELARVFKQVVE 393 (434)
Q Consensus 375 ~-------------~~~~~~~~l~~~v~~ll~ 393 (434)
. .+-.+.+++.+.+.+.+.
T Consensus 154 g~~f~lacg~~g~~g~~~~~~~iv~~v~~~l~ 185 (194)
T 1p3y_1 154 IMAFEIATGTRKPNRGLITPDKALLAIEKGFK 185 (194)
T ss_dssp CC------------CBCCCHHHHHHHHHHHCC
T ss_pred CcccccccCCcCcCCCCCCHHHHHHHHHHHhc
Confidence 1 122478888888888887
No 104
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=44.19 E-value=24 Score=32.70 Aligned_cols=52 Identities=21% Similarity=0.399 Sum_probs=35.7
Q ss_pred cceEEeccCcchHHHHHHh----CC-cEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhcc
Q 046033 323 IGGFISHCGWGSTVEGIMY----GV-PIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVEQ 394 (434)
Q Consensus 323 ~~~~I~hgG~~s~~eal~~----Gv-P~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~ 394 (434)
++++|+-||=||++.|+.. ++ |++.++.. -+|.-. .++.+++.+++++++++
T Consensus 115 ~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-------------~lGFLt-------~~~~~~~~~al~~il~g 171 (388)
T 3afo_A 115 TDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALG-------------TLGFLS-------PFDFKEHKKVFQEVISS 171 (388)
T ss_dssp CSEEEEEESHHHHHHHHHTTTTSCCCCEEEEECS-------------SCCSSC-------CEEGGGHHHHHHHHHTT
T ss_pred CCEEEEEeCcHHHHHHHHHhcccCCCeEEEEECC-------------CcccCC-------cCChHHHHHHHHHHhcC
Confidence 3459999999999999654 67 79888532 112211 24567788888888874
No 105
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=43.52 E-value=1.3e+02 Score=24.47 Aligned_cols=43 Identities=16% Similarity=0.112 Sum_probs=27.0
Q ss_pred EEEecccCHH-HH-hcccCcceEEeccCcchHHHHH---------HhCCcEEecc
Q 046033 306 MVVQGWAPQA-KI-LGHGSIGGFISHCGWGSTVEGI---------MYGVPIIAVP 349 (434)
Q Consensus 306 v~~~~~~p~~-~i-l~~~~~~~~I~hgG~~s~~eal---------~~GvP~v~~P 349 (434)
.+++++.... .+ ..+++ ..++--||+||+-|.. .+++|++++-
T Consensus 92 ~i~~~~~~~Rk~~m~~~sd-a~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 92 LVVTETMWERKQVMEDRAN-AFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp EEEESSHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred eEEcCCHHHHHHHHHHHCC-EEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 3344544333 33 34444 3466788899988875 2589999884
No 106
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=42.46 E-value=1.3e+02 Score=23.96 Aligned_cols=138 Identities=15% Similarity=0.122 Sum_probs=72.1
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhccc
Q 046033 242 SVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGHG 321 (434)
Q Consensus 242 ~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~~ 321 (434)
|.|-|-.||.+ +-+..++....++..|..+-+.+... ...|+.+. +|+.. +...
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HRtp~~l~-------------~~~~~---~~~~ 59 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA--------HRTPDKMF-------------DYAET---AKER 59 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHH-------------HHHHH---TTTT
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC--------cCCHHHHH-------------HHHHH---HHhC
Confidence 45666677765 45667777777877776554444322 22343222 11111 1111
Q ss_pred CcceEEeccCc-c---hHHHHHHhCCcEEeccCCC---ChhhHHHHHHhh--ceeeeecccccCC---cccHHHHHHHHH
Q 046033 322 SIGGFISHCGW-G---STVEGIMYGVPIIAVPMVL---DQLFNAKMVADI--GVGLEVPRDEINQ---RVRKEELARVFK 389 (434)
Q Consensus 322 ~~~~~I~hgG~-~---s~~eal~~GvP~v~~P~~~---dq~~na~~~~~~--G~g~~~~~~~~~~---~~~~~~l~~~v~ 389 (434)
.++++|.=.|. + ++..+ .--+|+|.+|... +...-..-+.+. |+++..-- ++ ..+..-++..|.
T Consensus 60 g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~---I~~ag~~nAa~lAa~Il 135 (166)
T 3oow_A 60 GLKVIIAGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFA---IGMAGAKNAALFAASIL 135 (166)
T ss_dssp TCCEEEEEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECC---STHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEe---cCCccchHHHHHHHHHH
Confidence 23447765553 2 33333 3468999999743 222223333333 44432211 22 345556655555
Q ss_pred HHhcccchHHHHHHHHHHHHHHHh
Q 046033 390 QVVEQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 390 ~ll~~~~~~~~~~~a~~l~~~~~~ 413 (434)
.+ . |+.++++.+.+++.+++
T Consensus 136 ~~-~---d~~l~~kl~~~r~~~~~ 155 (166)
T 3oow_A 136 QH-T---DINIAKALAEFRAEQTR 155 (166)
T ss_dssp GG-G---CHHHHHHHHHHHHHHHH
T ss_pred cC-C---CHHHHHHHHHHHHHHHH
Confidence 54 3 47888888888887764
No 107
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=42.12 E-value=27 Score=27.74 Aligned_cols=23 Identities=13% Similarity=0.325 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCC
Q 046033 5 TPYLALAKKLSQQNFHIYFCSTP 27 (434)
Q Consensus 5 ~p~l~lA~~L~~~Gh~V~~~~~~ 27 (434)
++...|++.|.++|.+|.|+.++
T Consensus 41 ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 41 HALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHCCCeEEEEecc
Confidence 46778999999999999999886
No 108
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=41.94 E-value=90 Score=23.64 Aligned_cols=47 Identities=17% Similarity=0.089 Sum_probs=33.5
Q ss_pred hCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhc
Q 046033 341 YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVE 393 (434)
Q Consensus 341 ~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~ 393 (434)
..+|+|++-...+ ......+.+.|+--.+. +.++.+++..+|+.++.
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~g~~~~l~-----kP~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQDGAYDFIA-----KPFAADRLVQSARRAEE 120 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHTTCCEEEE-----SSCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhcCCCeEEe-----CCCCHHHHHHHHHHHHH
Confidence 4788888854433 44555566677765564 34789999999999998
No 109
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=41.29 E-value=30 Score=29.63 Aligned_cols=35 Identities=11% Similarity=0.193 Sum_probs=24.9
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHHcCCcEEEEe
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~~giP~v~~~ 125 (434)
+.+.+.+||+||...... .....-+..|+|++.+.
T Consensus 53 E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 53 EGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 556678999999885432 23444567899999875
No 110
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=41.28 E-value=28 Score=27.74 Aligned_cols=23 Identities=35% Similarity=0.429 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCC
Q 046033 5 TPYLALAKKLSQQNFHIYFCSTP 27 (434)
Q Consensus 5 ~p~l~lA~~L~~~Gh~V~~~~~~ 27 (434)
++...|++.|.++|.+|.|+.++
T Consensus 40 ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 40 YPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHCCCeEEEEecc
Confidence 46778999999999999999886
No 111
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=40.64 E-value=1.4e+02 Score=23.84 Aligned_cols=140 Identities=17% Similarity=0.155 Sum_probs=73.7
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhcc
Q 046033 241 SSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGH 320 (434)
Q Consensus 241 ~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~ 320 (434)
+|.|-|-.||.+ +-+..++....++..|..+-+.+... ...|+.+. .|+.... .
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HR~p~~~~-------------~~~~~a~---~ 59 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA--------HRTPKETV-------------EFVENAD---N 59 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHH-------------HHHHHHH---H
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHH-------------HHHHHHH---h
Confidence 356777777765 45667777778877777665544432 22343221 1221111 1
Q ss_pred cCcceEEeccCc-c---hHHHHHHhCCcEEeccCCC-C--hhhHHHHHHh--hcee--eeecccccCCcccHHHHHHHHH
Q 046033 321 GSIGGFISHCGW-G---STVEGIMYGVPIIAVPMVL-D--QLFNAKMVAD--IGVG--LEVPRDEINQRVRKEELARVFK 389 (434)
Q Consensus 321 ~~~~~~I~hgG~-~---s~~eal~~GvP~v~~P~~~-d--q~~na~~~~~--~G~g--~~~~~~~~~~~~~~~~l~~~v~ 389 (434)
..++++|.=.|. + ++..+ .--+|+|.+|... + ...-..-+.+ .|+. .+.. ++ .+..+..-++..|.
T Consensus 60 ~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I-~~-a~~~nAa~lAa~Il 136 (169)
T 3trh_A 60 RGCAVFIAAAGLAAHLAGTIAA-HTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAI-GK-AGAKNAAILAAQII 136 (169)
T ss_dssp TTEEEEEEEECSSCCHHHHHHH-TCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCS-TH-HHHHHHHHHHHHHH
T ss_pred CCCcEEEEECChhhhhHHHHHh-cCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEec-CC-ccchHHHHHHHHHH
Confidence 123346655553 2 33333 3468999999753 2 2222333334 3543 2221 00 02345566666555
Q ss_pred HHhcccchHHHHHHHHHHHHHHHh
Q 046033 390 QVVEQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 390 ~ll~~~~~~~~~~~a~~l~~~~~~ 413 (434)
.+ . |+.++++.+..++.+++
T Consensus 137 ~~-~---d~~l~~kl~~~r~~~~~ 156 (169)
T 3trh_A 137 AL-Q---DKSIAQKLVQQRTAKRE 156 (169)
T ss_dssp HT-T---CHHHHHHHHHHHHHHHH
T ss_pred cC-C---CHHHHHHHHHHHHHHHH
Confidence 55 3 47889998888888766
No 112
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=39.93 E-value=25 Score=34.23 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=29.3
Q ss_pred HHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEE
Q 046033 87 PAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAF 124 (434)
Q Consensus 87 ~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~ 124 (434)
.++.++++..+||++|+.. ....+|+++|||++.+
T Consensus 446 ~el~~~i~~~~pDl~ig~~---~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKLKPDMFFAGI---KEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHHCCSEEEECH---HHHHHHHHTTCEEEET
T ss_pred HHHHHHHHhcCCCEEEccc---chhHHHHhcCCCEEEe
Confidence 4577889999999999883 4678999999999854
No 113
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=39.92 E-value=25 Score=28.43 Aligned_cols=30 Identities=3% Similarity=-0.083 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCchhhhhh
Q 046033 6 PYLALAKKLSQQNFHIYFCSTPINLQSMSQ 35 (434)
Q Consensus 6 p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~ 35 (434)
-...+.+.|+++|++|+++.++...+++..
T Consensus 20 k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 20 NISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp GHHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred HHHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 367889999999999999999988888765
No 114
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=39.85 E-value=1.5e+02 Score=24.09 Aligned_cols=102 Identities=17% Similarity=0.139 Sum_probs=53.5
Q ss_pred hhhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEE
Q 046033 229 TKIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVV 308 (434)
Q Consensus 229 ~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~ 308 (434)
.++-++|.+.. ...|+.|... .......++..+.+-+++-+.... +++. +..+..-+...+
T Consensus 23 ~~lg~~La~~g---~~lV~GGg~~----GiM~aa~~gA~~~gG~~iGv~p~~----------l~~~--e~~~~~~~~~~~ 83 (191)
T 1t35_A 23 AELGVYMAEQG---IGLVYGGSRV----GLMGTIADAIMENGGTAIGVMPSG----------LFSG--EVVHQNLTELIE 83 (191)
T ss_dssp HHHHHHHHHTT---CEEEECCCCS----HHHHHHHHHHHTTTCCEEEEEETT----------CCHH--HHTTCCCSEEEE
T ss_pred HHHHHHHHHCC---CEEEECCCcc----cHHHHHHHHHHHcCCeEEEEeCch----------hccc--ccccCCCCcccc
Confidence 34555565532 5666665431 344555556555666666555421 1100 000012223444
Q ss_pred ecccCHH-HHh-cccCcceEEeccCcchHHHH---H------HhCCcEEeccC
Q 046033 309 QGWAPQA-KIL-GHGSIGGFISHCGWGSTVEG---I------MYGVPIIAVPM 350 (434)
Q Consensus 309 ~~~~p~~-~il-~~~~~~~~I~hgG~~s~~ea---l------~~GvP~v~~P~ 350 (434)
+...+.. .++ ..++ ..++--||.||+-|. + .+++|++++..
T Consensus 84 ~~~~~~Rk~~~~~~sd-a~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 84 VNGMHERKAKMSELAD-GFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp ESHHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred CCCHHHHHHHHHHHCC-EEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 4555443 333 3444 457788999997665 4 37899999853
No 115
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=39.75 E-value=1.3e+02 Score=25.09 Aligned_cols=44 Identities=14% Similarity=0.070 Sum_probs=28.1
Q ss_pred EEEecccCHH-HHh-cccCcceEEeccCcchHHHHHH---------hCCcEEeccC
Q 046033 306 MVVQGWAPQA-KIL-GHGSIGGFISHCGWGSTVEGIM---------YGVPIIAVPM 350 (434)
Q Consensus 306 v~~~~~~p~~-~il-~~~~~~~~I~hgG~~s~~eal~---------~GvP~v~~P~ 350 (434)
..+...++.. .++ ..++ ..++--||.||+-|..- +++|++++-.
T Consensus 93 ~~~~~~f~~Rk~~~~~~sd-a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 93 VRAVADMHQRKAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEEESSHHHHHHHHHHTCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eeecCCHHHHHHHHHHhCC-EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 3344555543 333 3334 45778899999987762 4899998854
No 116
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=39.52 E-value=1.4e+02 Score=23.74 Aligned_cols=141 Identities=20% Similarity=0.140 Sum_probs=74.5
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhcc
Q 046033 241 SSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGH 320 (434)
Q Consensus 241 ~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~ 320 (434)
+|.|-|-+||.+ +-+..++....++..|..+-+.+... ...|+.+. .|..+ ...
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~-------------~~~~~---a~~ 64 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--------HRTPDYMF-------------EYAET---ARE 64 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHH-------------HHHHH---TTT
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec--------cCCHHHHH-------------HHHHH---HHh
Confidence 567888888865 45667777777877777655444322 22333221 11110 000
Q ss_pred cCcceEEeccCc-c---hHHHHHHhCCcEEeccCCC---ChhhHHHHHHh--hceeee-ecccccCCcccHHHHHHHHHH
Q 046033 321 GSIGGFISHCGW-G---STVEGIMYGVPIIAVPMVL---DQLFNAKMVAD--IGVGLE-VPRDEINQRVRKEELARVFKQ 390 (434)
Q Consensus 321 ~~~~~~I~hgG~-~---s~~eal~~GvP~v~~P~~~---dq~~na~~~~~--~G~g~~-~~~~~~~~~~~~~~l~~~v~~ 390 (434)
-.++++|.=.|. + ++..+ ..-+|+|.+|... +...-..-+.+ .|+.+. +..++ .+..++.-++..|..
T Consensus 65 ~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~-a~~~nAallAaqIla 142 (170)
T 1xmp_A 65 RGLKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGK-AGSTNAGLLAAQILG 142 (170)
T ss_dssp TTCCEEEEEEESSCCHHHHHHT-TCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSH-HHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCC-cchHHHHHHHHHHHc
Confidence 112336654443 2 33333 3468999999643 22222233444 355431 11100 133566667666664
Q ss_pred HhcccchHHHHHHHHHHHHHHHh
Q 046033 391 VVEQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 391 ll~~~~~~~~~~~a~~l~~~~~~ 413 (434)
+ . +++++++.+..++.+++
T Consensus 143 ~-~---d~~l~~kl~~~r~~~~~ 161 (170)
T 1xmp_A 143 S-F---HDDIHDALELRREAIEK 161 (170)
T ss_dssp T-T---CHHHHHHHHHHHHHHHH
T ss_pred c-C---CHHHHHHHHHHHHHHHH
Confidence 3 4 57889998888888765
No 117
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=39.44 E-value=74 Score=25.37 Aligned_cols=50 Identities=18% Similarity=0.286 Sum_probs=34.1
Q ss_pred HHHHHhHHHHHHHHhhcCCCEEEEc-CCC---c-h----------HHHHHHHcCCcEEEEecchH
Q 046033 80 EAFDAAKPAFCNVLETLKPTLVIYD-LFQ---P-W----------AAEAAYQHDIAAVAFVTIAA 129 (434)
Q Consensus 80 ~~~~~~~~~~~~~l~~~~pDlVi~d-~~~---~-~----------~~~~A~~~giP~v~~~~~~~ 129 (434)
..+..+.+.+.+++++++||.|..+ .|. . . +..++...|+|+.-+.+...
T Consensus 46 ~RL~~I~~~l~~~i~~~~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~~v 110 (166)
T 4ep4_A 46 ERVGRIHARVLEVLHRFRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPMQV 110 (166)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHHH
Confidence 3344445778899999999999877 331 1 1 23556677999998876654
No 118
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=39.23 E-value=1.5e+02 Score=23.75 Aligned_cols=141 Identities=15% Similarity=0.159 Sum_probs=72.8
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhcc
Q 046033 241 SSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGH 320 (434)
Q Consensus 241 ~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~ 320 (434)
.|.|-|-+||.+ +-+..++....++..|..+-+.+... ...|+.+. .|+... ..
T Consensus 12 ~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa--------HR~p~~l~-------------~~~~~a---~~ 65 (173)
T 4grd_A 12 APLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA--------HRMPDEMF-------------DYAEKA---RE 65 (173)
T ss_dssp SCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHH-------------HHHHHH---TT
T ss_pred CCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc--------ccCHHHHH-------------HHHHHH---Hh
Confidence 567888888865 45667777778887787755544432 22343221 111111 11
Q ss_pred cCcceEEeccC-cc---hHHHHHHhCCcEEeccCCCC---hhhHHHHHHhh--ceeeeecc-cccCCcccHHHHHHHHHH
Q 046033 321 GSIGGFISHCG-WG---STVEGIMYGVPIIAVPMVLD---QLFNAKMVADI--GVGLEVPR-DEINQRVRKEELARVFKQ 390 (434)
Q Consensus 321 ~~~~~~I~hgG-~~---s~~eal~~GvP~v~~P~~~d---q~~na~~~~~~--G~g~~~~~-~~~~~~~~~~~l~~~v~~ 390 (434)
-.++++|.=.| .+ ++..+ .--+|+|.+|.... ..+-..-+.++ |+.+..-- ++ .+..+..-++..|..
T Consensus 66 ~g~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~-~~a~NAallA~~ILa 143 (173)
T 4grd_A 66 RGLRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGE-AGAANAALFAVSILS 143 (173)
T ss_dssp TTCSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSH-HHHHHHHHHHHHHHT
T ss_pred cCCeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCC-cchHHHHHHHHHHHc
Confidence 12333554333 32 33333 55799999996432 23323333343 55443211 00 122344555554444
Q ss_pred HhcccchHHHHHHHHHHHHHHHh
Q 046033 391 VVEQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 391 ll~~~~~~~~~~~a~~l~~~~~~ 413 (434)
+ . +++++++.+.+++++++
T Consensus 144 ~-~---d~~l~~kl~~~r~~~~~ 162 (173)
T 4grd_A 144 G-N---SVDYANRLAAFRVRQNE 162 (173)
T ss_dssp T-S---CHHHHHHHHHHHHHHHH
T ss_pred C-C---CHHHHHHHHHHHHHHHH
Confidence 3 3 57888888888777654
No 119
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=38.90 E-value=1.4e+02 Score=23.57 Aligned_cols=139 Identities=17% Similarity=0.173 Sum_probs=72.2
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhccc
Q 046033 242 SVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGHG 321 (434)
Q Consensus 242 ~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~~ 321 (434)
+.|-|-+||.+ +-+..++....++..|..+-+.+... ...|+.+. .|... ....
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HR~p~~~~-------------~~~~~---a~~~ 57 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA--------HRTPKMMV-------------QFASE---ARER 57 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHH-------------HHHHH---TTTT
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC--------cCCHHHHH-------------HHHHH---HHhC
Confidence 45666667755 45667777777877777655444332 22343221 11110 0111
Q ss_pred CcceEEeccCc----chHHHHHHhCCcEEeccCCCC---hhhHHHHHHhh--ce--eeeecccccCCcccHHHHHHHHHH
Q 046033 322 SIGGFISHCGW----GSTVEGIMYGVPIIAVPMVLD---QLFNAKMVADI--GV--GLEVPRDEINQRVRKEELARVFKQ 390 (434)
Q Consensus 322 ~~~~~I~hgG~----~s~~eal~~GvP~v~~P~~~d---q~~na~~~~~~--G~--g~~~~~~~~~~~~~~~~l~~~v~~ 390 (434)
.++++|.=.|. .++..+ ..-+|+|.+|.... ...-..-+.+. |+ +.+-. ++ .+..+..-++..|..
T Consensus 58 g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I-~~-a~~~nAa~lAa~Il~ 134 (163)
T 3ors_A 58 GINIIIAGAGGAAHLPGMVAS-LTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAI-GA-AGAKNAGILAARMLS 134 (163)
T ss_dssp TCCEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCS-TH-HHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEc-CC-cccHHHHHHHHHHHh
Confidence 23346655443 233333 36689999996432 22223333333 54 33321 00 023466666666655
Q ss_pred HhcccchHHHHHHHHHHHHHHHh
Q 046033 391 VVEQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 391 ll~~~~~~~~~~~a~~l~~~~~~ 413 (434)
+- ++.++++.+..++.+++
T Consensus 135 ~~----d~~l~~kl~~~r~~~~~ 153 (163)
T 3ors_A 135 IQ----NPSLVEKLNQYESSLIQ 153 (163)
T ss_dssp TT----CTHHHHHHHHHHHHHHH
T ss_pred CC----CHHHHHHHHHHHHHHHH
Confidence 53 47888888888887765
No 120
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=38.89 E-value=32 Score=28.05 Aligned_cols=23 Identities=13% Similarity=0.325 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCC
Q 046033 5 TPYLALAKKLSQQNFHIYFCSTP 27 (434)
Q Consensus 5 ~p~l~lA~~L~~~Gh~V~~~~~~ 27 (434)
++...|++.|.++|.+|.|+.+|
T Consensus 64 ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 64 HALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHcCCeEEEEecc
Confidence 46778999999999999999886
No 121
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=38.88 E-value=19 Score=31.85 Aligned_cols=28 Identities=11% Similarity=0.080 Sum_probs=23.3
Q ss_pred cceEEeccCcchHHHHHHh----CCcEEeccC
Q 046033 323 IGGFISHCGWGSTVEGIMY----GVPIIAVPM 350 (434)
Q Consensus 323 ~~~~I~hgG~~s~~eal~~----GvP~v~~P~ 350 (434)
++++|+-||=||+.+++.. ++|++.++.
T Consensus 64 ~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 64 ADLAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp CSEEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred CCEEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 4559999999999999843 789999973
No 122
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=38.83 E-value=47 Score=26.27 Aligned_cols=47 Identities=11% Similarity=0.251 Sum_probs=32.8
Q ss_pred HHhHHHHHHHHhhcCCCEEEEc-CCC-c-------------hHHHHHHHcCCcEEEEecchH
Q 046033 83 DAAKPAFCNVLETLKPTLVIYD-LFQ-P-------------WAAEAAYQHDIAAVAFVTIAA 129 (434)
Q Consensus 83 ~~~~~~~~~~l~~~~pDlVi~d-~~~-~-------------~~~~~A~~~giP~v~~~~~~~ 129 (434)
......+.+++++.+||.|..+ .|. - ....++...|+|+.-+.+...
T Consensus 45 ~~i~~~l~~~i~~~~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~~v 106 (158)
T 1hjr_A 45 KLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQV 106 (158)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHHH
Confidence 4445778899999999999887 221 1 124556677999998876554
No 123
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=38.80 E-value=1.5e+02 Score=23.74 Aligned_cols=138 Identities=18% Similarity=0.173 Sum_probs=73.8
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhcc
Q 046033 241 SSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGH 320 (434)
Q Consensus 241 ~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~ 320 (434)
++.|-|-.||.+ +-+..++....++..+..+-+.+... ...|+.+. .|+.... -.
T Consensus 7 ~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa--------HR~p~~~~-------------~~~~~a~-~~- 61 (174)
T 3lp6_A 7 RPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA--------HRTPEAMF-------------SYARGAA-AR- 61 (174)
T ss_dssp CCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHH-------------HHHHHHH-HH-
T ss_pred CCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC--------CCCHHHHH-------------HHHHHHH-hC-
Confidence 345666677755 45667777778887777655544432 22343221 2221111 01
Q ss_pred cCcceEEeccCc-c---hHHHHHHhCCcEEeccCCCC---hhhHHHHHHhh--ce--eeeecccccCCcccHHHHHHHHH
Q 046033 321 GSIGGFISHCGW-G---STVEGIMYGVPIIAVPMVLD---QLFNAKMVADI--GV--GLEVPRDEINQRVRKEELARVFK 389 (434)
Q Consensus 321 ~~~~~~I~hgG~-~---s~~eal~~GvP~v~~P~~~d---q~~na~~~~~~--G~--g~~~~~~~~~~~~~~~~l~~~v~ 389 (434)
.++++|.=.|. + ++..+ .--+|+|.+|...- ...-..-+.+. |+ +.+-. .+..++..++..|.
T Consensus 62 -g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I----~~~~nAa~lAa~Il 135 (174)
T 3lp6_A 62 -GLEVIIAGAGGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSI----GGAGNAGLLAVRML 135 (174)
T ss_dssp -TCCEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCT----TCHHHHHHHHHHHH
T ss_pred -CCCEEEEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEc----CcchHHHHHHHHHH
Confidence 23346655543 2 33333 36689999996522 22222223332 53 33332 23456666666665
Q ss_pred HHhcccchHHHHHHHHHHHHHHHh
Q 046033 390 QVVEQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 390 ~ll~~~~~~~~~~~a~~l~~~~~~ 413 (434)
.+- ++.++++.+..++.+++
T Consensus 136 ~~~----d~~l~~kl~~~r~~~~~ 155 (174)
T 3lp6_A 136 GAA----NPQLRARIVAFQDRLAD 155 (174)
T ss_dssp HTT----CHHHHHHHHHHHHHHHH
T ss_pred hCC----CHHHHHHHHHHHHHHHH
Confidence 553 47889999888888765
No 124
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=38.74 E-value=1.2e+02 Score=26.61 Aligned_cols=84 Identities=2% Similarity=-0.031 Sum_probs=51.8
Q ss_pred HHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHHHhHHHHHHHH
Q 046033 14 LSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFDAAKPAFCNVL 93 (434)
Q Consensus 14 L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 93 (434)
|........+.+++.+.=+... .|++.+.+ .+..++ .+ -. .....++.+.+
T Consensus 174 l~~~~~~~~v~~H~af~Yf~~~-------yGl~~~~~------~~~~~~-~e-------ps--------~~~l~~l~~~i 224 (286)
T 3gi1_A 174 FKKVRSKTFVTQHTAFSYLAKR-------FGLKQLGI------SGISPE-QE-------PS--------PRQLKEIQDFV 224 (286)
T ss_dssp HTTCSCCEEEEEESCCHHHHHH-------TTCEEEEE------ECSCC-----------CC--------HHHHHHHHHHH
T ss_pred HhcCCCCEEEEECCchHHHHHH-------CCCeEeec------cccCCC-CC-------CC--------HHHHHHHHHHH
Confidence 3333444555667777777777 78888766 222222 00 01 11124566888
Q ss_pred hhcCCCEEEEcCCCc--hHHHHHHHcCCcEEEEec
Q 046033 94 ETLKPTLVIYDLFQP--WAAEAAYQHDIAAVAFVT 126 (434)
Q Consensus 94 ~~~~pDlVi~d~~~~--~~~~~A~~~giP~v~~~~ 126 (434)
++.+..+|+++.... .+-.+|+..|++++.+.+
T Consensus 225 k~~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 225 KEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp HHTTCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred HHcCCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 999999999994433 345778999999987653
No 125
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=38.44 E-value=32 Score=28.09 Aligned_cols=23 Identities=30% Similarity=0.418 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCC
Q 046033 5 TPYLALAKKLSQQNFHIYFCSTP 27 (434)
Q Consensus 5 ~p~l~lA~~L~~~Gh~V~~~~~~ 27 (434)
++...|++.|.++|.+|.|+.+|
T Consensus 63 ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 63 YPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHCCCeEEEEeCc
Confidence 46678999999999999999886
No 126
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=38.36 E-value=1.2e+02 Score=22.37 Aligned_cols=48 Identities=13% Similarity=0.053 Sum_probs=30.0
Q ss_pred hCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhc
Q 046033 341 YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVE 393 (434)
Q Consensus 341 ~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~ 393 (434)
...|+|++-...+.......+...|+--.+. +.++.+++..+|++++.
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~-----KP~~~~~L~~~i~~~~~ 118 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDAGIHQFLT-----KPWHPEQLLSSARNAAR 118 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHTTCCEEEE-----SSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhhchhhhcc-----CCCCHHHHHHHHHHHHH
Confidence 3577777755444433333344445533343 34789999999999988
No 127
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=37.54 E-value=1e+02 Score=27.76 Aligned_cols=86 Identities=13% Similarity=0.238 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHHHh
Q 046033 6 PYLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFDAA 85 (434)
Q Consensus 6 p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
.+.++++.|.++|++|.+.+++...+.+++... .... ..+.+ .| ... +
T Consensus 205 ~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~-~~~~--~~~~l------~g-------------~~s---l------- 252 (349)
T 3tov_A 205 RFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVE-QMET--KPIVA------TG-------------KFQ---L------- 252 (349)
T ss_dssp HHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHH-TCSS--CCEEC------TT-------------CCC---H-------
T ss_pred HHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHH-hccc--ccEEe------eC-------------CCC---H-------
Confidence 467888888888888888777666655444110 0000 00001 00 001 1
Q ss_pred HHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecch
Q 046033 86 KPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTIA 128 (434)
Q Consensus 86 ~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~ 128 (434)
.++..+++ +.|++|+.- .+...+|..+|+|+|.+...+
T Consensus 253 -~e~~ali~--~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~t 290 (349)
T 3tov_A 253 -GPLAAAMN--RCNLLITND--SGPMHVGISQGVPIVALYGPS 290 (349)
T ss_dssp -HHHHHHHH--TCSEEEEES--SHHHHHHHTTTCCEEEECSSC
T ss_pred -HHHHHHHH--hCCEEEECC--CCHHHHHHhcCCCEEEEECCC
Confidence 12334555 569999752 467888999999999876443
No 128
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=36.91 E-value=44 Score=28.33 Aligned_cols=37 Identities=19% Similarity=0.074 Sum_probs=24.2
Q ss_pred HHHhhcCCCEEEEcC--CCchHHHHHHHcCCcEEEEecc
Q 046033 91 NVLETLKPTLVIYDL--FQPWAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~--~~~~~~~~A~~~giP~v~~~~~ 127 (434)
+.+...+||+||... ........-+..|||++.+...
T Consensus 51 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~ 89 (245)
T 1n2z_A 51 ERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDAT 89 (245)
T ss_dssp HHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCC
T ss_pred HHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCC
Confidence 455668999999852 2222344445789999976543
No 129
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=36.80 E-value=2.1e+02 Score=25.41 Aligned_cols=110 Identities=13% Similarity=0.097 Sum_probs=59.6
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhccc
Q 046033 242 SVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGHG 321 (434)
Q Consensus 242 ~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~~ 321 (434)
++.+|++|.+.. ..++.++...+.+++.+....... -+.+.++. .+. .-+-...+++..+
T Consensus 6 rvgiiG~G~~~~------~~~~~~l~~~~~~lvav~d~~~~~--------~~~~a~~~----~~~--~~~~~~~~ll~~~ 65 (336)
T 2p2s_A 6 RFAAIGLAHNHI------YDMCQQLIDAGAELAGVFESDSDN--------RAKFTSLF----PSV--PFAASAEQLITDA 65 (336)
T ss_dssp EEEEECCSSTHH------HHHHHHHHHTTCEEEEEECSCTTS--------CHHHHHHS----TTC--CBCSCHHHHHTCT
T ss_pred EEEEECCChHHH------HHhhhhhcCCCcEEEEEeCCCHHH--------HHHHHHhc----CCC--cccCCHHHHhhCC
Confidence 377787776531 123344444566765554432111 12222221 111 1245667888877
Q ss_pred CcceEEeccC----cchHHHHHHhCCcEEec-cCCCC--h-hhHHHHHHhhceeeeec
Q 046033 322 SIGGFISHCG----WGSTVEGIMYGVPIIAV-PMVLD--Q-LFNAKMVADIGVGLEVP 371 (434)
Q Consensus 322 ~~~~~I~hgG----~~s~~eal~~GvP~v~~-P~~~d--q-~~na~~~~~~G~g~~~~ 371 (434)
++++|+-.-- .-.+.+|+.+|+++++= |...+ + ......+++.|+-+.+.
T Consensus 66 ~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 123 (336)
T 2p2s_A 66 SIDLIACAVIPCDRAELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETGRKFAVY 123 (336)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHCCCEEEC
T ss_pred CCCEEEEeCChhhHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 7777773332 34577889999998775 76543 2 33444455567655554
No 130
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=36.56 E-value=1.6e+02 Score=23.52 Aligned_cols=140 Identities=16% Similarity=0.151 Sum_probs=72.1
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhcc
Q 046033 241 SSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGH 320 (434)
Q Consensus 241 ~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~ 320 (434)
+|.|-|-.||.+ +-+..++....++..+..+-+.+... ...|+.+. .|+.. ...
T Consensus 12 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa--------HR~p~~~~-------------~~~~~---a~~ 65 (174)
T 3kuu_A 12 GVKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA--------HRTPDRLF-------------SFAEQ---AEA 65 (174)
T ss_dssp CCCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHH-------------HHHHH---TTT
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHH-------------HHHHH---HHh
Confidence 345666677755 45667777778877777665544432 22343221 11111 011
Q ss_pred cCcceEEeccCc-c---hHHHHHHhCCcEEeccCCC---ChhhHHHHHHhh--ce--eeeecccccCCcccHHHHHHHHH
Q 046033 321 GSIGGFISHCGW-G---STVEGIMYGVPIIAVPMVL---DQLFNAKMVADI--GV--GLEVPRDEINQRVRKEELARVFK 389 (434)
Q Consensus 321 ~~~~~~I~hgG~-~---s~~eal~~GvP~v~~P~~~---dq~~na~~~~~~--G~--g~~~~~~~~~~~~~~~~l~~~v~ 389 (434)
..++++|.=.|. + ++..+ .--+|+|.+|... +...-..-+.+. |+ +.+... + .+..+..-++..|.
T Consensus 66 ~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~-~-a~~~nAa~lAa~IL 142 (174)
T 3kuu_A 66 NGLHVIIAGNGGAAHLPGMLAA-KTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIG-K-AGAANAALLAAQIL 142 (174)
T ss_dssp TTCSEEEEEEESSCCHHHHHHH-TCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSS-H-HHHHHHHHHHHHHH
T ss_pred CCCcEEEEECChhhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeC-C-ccchHHHHHHHHHH
Confidence 123336655443 2 33333 3468999999643 222222333333 54 333210 0 02345666666665
Q ss_pred HHhcccchHHHHHHHHHHHHHHHh
Q 046033 390 QVVEQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 390 ~ll~~~~~~~~~~~a~~l~~~~~~ 413 (434)
.+ . |++++++.+.+++.+++
T Consensus 143 a~-~---d~~l~~kl~~~r~~~~~ 162 (174)
T 3kuu_A 143 AL-H---DTELAGRLAHWRQSQTD 162 (174)
T ss_dssp HT-T---CHHHHHHHHHHHHHHHH
T ss_pred cC-C---CHHHHHHHHHHHHHHHH
Confidence 55 3 47888888888888765
No 131
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=36.39 E-value=39 Score=28.84 Aligned_cols=35 Identities=14% Similarity=0.100 Sum_probs=23.8
Q ss_pred HHHhhcCCCEEEEcCCC--chHHHHHHHcCCcEEEEe
Q 046033 91 NVLETLKPTLVIYDLFQ--PWAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~--~~~~~~A~~~giP~v~~~ 125 (434)
+.+...+||+||+.... ......-+..|||++.+.
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 53 EGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp HHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 45666899999987432 223344467899998874
No 132
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=36.32 E-value=30 Score=31.41 Aligned_cols=36 Identities=22% Similarity=0.259 Sum_probs=23.9
Q ss_pred HHHhhcCCCEEEEcCCCch-HHHHHHHcCCcEEEEec
Q 046033 91 NVLETLKPTLVIYDLFQPW-AAEAAYQHDIAAVAFVT 126 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~~-~~~~A~~~giP~v~~~~ 126 (434)
+.+.+.+||+||....... .....+.+|||++.+..
T Consensus 90 E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 90 ESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp HHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred HHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 4555679999998743221 22345678999998753
No 133
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=36.29 E-value=67 Score=23.83 Aligned_cols=40 Identities=10% Similarity=0.111 Sum_probs=25.5
Q ss_pred HHHHhhcCCCEEEEcCCCc--hHHHHHHHc-------CCcEEEEecchH
Q 046033 90 CNVLETLKPTLVIYDLFQP--WAAEAAYQH-------DIAAVAFVTIAA 129 (434)
Q Consensus 90 ~~~l~~~~pDlVi~d~~~~--~~~~~A~~~-------giP~v~~~~~~~ 129 (434)
.+.++..+||+||.|...+ .+..+.+.+ .+|++.++....
T Consensus 41 l~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~ 89 (136)
T 3t6k_A 41 LQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGD 89 (136)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTC
T ss_pred HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCC
Confidence 3456677899999995543 344444332 588888876543
No 134
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=35.81 E-value=40 Score=30.11 Aligned_cols=37 Identities=24% Similarity=0.283 Sum_probs=25.0
Q ss_pred HHHhhcCCCEEEEcCCCc-hHHHHHHHcCCcEEEEecc
Q 046033 91 NVLETLKPTLVIYDLFQP-WAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~-~~~~~A~~~giP~v~~~~~ 127 (434)
+.+.+.+||+||...... .....-+..|||++.+...
T Consensus 78 E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~ 115 (326)
T 3psh_A 78 ESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLR 115 (326)
T ss_dssp HHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSC
T ss_pred HHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEecc
Confidence 456668999999874322 2344446779999987643
No 135
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=35.72 E-value=67 Score=23.11 Aligned_cols=41 Identities=20% Similarity=0.418 Sum_probs=26.1
Q ss_pred HHHHHhhcCCCEEEEcCCCc--hHHHHHHH----cCCcEEEEecchH
Q 046033 89 FCNVLETLKPTLVIYDLFQP--WAAEAAYQ----HDIAAVAFVTIAA 129 (434)
Q Consensus 89 ~~~~l~~~~pDlVi~d~~~~--~~~~~A~~----~giP~v~~~~~~~ 129 (434)
..+.++..+||+||.|...+ .+..+.+. .++|++.++....
T Consensus 38 al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 38 AVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp HHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred HHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 33556677899999995543 33444433 3688888775543
No 136
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=35.69 E-value=32 Score=29.52 Aligned_cols=37 Identities=16% Similarity=0.004 Sum_probs=24.2
Q ss_pred HHHhhcCCCEEEEcCCCc-hHHHHHHHcCCcEEEEecc
Q 046033 91 NVLETLKPTLVIYDLFQP-WAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~-~~~~~A~~~giP~v~~~~~ 127 (434)
+.+...+||+||...... .....-+..|||++.+...
T Consensus 54 E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~ 91 (260)
T 2q8p_A 54 EAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD 91 (260)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCS
T ss_pred HHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCC
Confidence 456668999999863321 2234455679999987543
No 137
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=35.50 E-value=70 Score=26.50 Aligned_cols=47 Identities=9% Similarity=-0.067 Sum_probs=31.4
Q ss_pred hhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEE
Q 046033 230 KIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWV 276 (434)
Q Consensus 230 ~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~ 276 (434)
.+.+|+.....++++||..++......+.+..+.+++++.|..+.+.
T Consensus 17 ~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 17 LFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 34445533334569999988754444577888889999998875443
No 138
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=35.41 E-value=52 Score=24.81 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=24.6
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHHc---------CCcEEEEecch
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQH---------DIAAVAFVTIA 128 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~~---------giP~v~~~~~~ 128 (434)
+.++..+||+||.|...+ .+..+.+.+ .+|++.++...
T Consensus 52 ~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 52 DAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 455667899999995443 344444433 37888877653
No 139
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=35.20 E-value=30 Score=27.58 Aligned_cols=23 Identities=22% Similarity=0.446 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCC
Q 046033 5 TPYLALAKKLSQQNFHIYFCSTP 27 (434)
Q Consensus 5 ~p~l~lA~~L~~~Gh~V~~~~~~ 27 (434)
++...|++.|.++|.+|.|+.++
T Consensus 48 ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 48 YPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp HHHHHHHHHHHHHCCEEEEEECS
T ss_pred HHHHHHHHHHHHCCCeEEEEecc
Confidence 46778999999999999999886
No 140
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=34.55 E-value=1.8e+02 Score=25.78 Aligned_cols=33 Identities=9% Similarity=-0.051 Sum_probs=24.5
Q ss_pred HHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEecc
Q 046033 91 NVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~ 127 (434)
.+++ ..|++|+.- .+.+.+|..+|+|+|.+...
T Consensus 257 ali~--~a~l~I~~D--sg~~HlAaa~g~P~v~lfg~ 289 (348)
T 1psw_A 257 ILIA--ACKAIVTND--SGLMHVAAALNRPLVALYGP 289 (348)
T ss_dssp HHHH--TSSEEEEES--SHHHHHHHHTTCCEEEEESS
T ss_pred HHHH--hCCEEEecC--CHHHHHHHHcCCCEEEEECC
Confidence 4555 569999753 46678888999999987643
No 141
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=34.23 E-value=1.7e+02 Score=23.05 Aligned_cols=137 Identities=15% Similarity=0.102 Sum_probs=72.3
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhccc
Q 046033 242 SVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGHG 321 (434)
Q Consensus 242 ~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~~ 321 (434)
|.|-|-.||.+ +-+..++....++..+..+-+.+... ...|+.+. .|+.... ..-
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa--------HR~p~~~~-------------~~~~~a~--~~~ 57 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA--------HKTAEHVV-------------SMLKEYE--ALD 57 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHH-------------HHHHHHH--TSC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHH-------------HHHHHhh--hcC
Confidence 45666677755 45667777777877777655544432 22343221 1211111 000
Q ss_pred CcceEEeccCcc----hHHHHHHhCCcEEeccCCC---ChhhHHHHHHhh--ceeeeecccccCCcccHHHHHHHHHHHh
Q 046033 322 SIGGFISHCGWG----STVEGIMYGVPIIAVPMVL---DQLFNAKMVADI--GVGLEVPRDEINQRVRKEELARVFKQVV 392 (434)
Q Consensus 322 ~~~~~I~hgG~~----s~~eal~~GvP~v~~P~~~---dq~~na~~~~~~--G~g~~~~~~~~~~~~~~~~l~~~v~~ll 392 (434)
.++++|.=.|.. ++..+ .--+|+|.+|... +..+ ..-+-+. |+.+.-- .+..++.-++..|..+
T Consensus 58 ~~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~d-LlS~vqmp~GvpVatv----~~~~nAa~lA~~Il~~- 130 (159)
T 3rg8_A 58 RPKLYITIAGRSNALSGFVDG-FVKGATIACPPPSDSFAGAD-IYSSLRMPSGISPALV----LEPKNAALLAARIFSL- 130 (159)
T ss_dssp SCEEEEEECCSSCCHHHHHHH-HSSSCEEECCCCCCGGGGTH-HHHHHCCCTTCCCEEC----CSHHHHHHHHHHHHTT-
T ss_pred CCcEEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCcc-HHHHHhCCCCCceEEe----cCchHHHHHHHHHHhC-
Confidence 134466555532 33333 3568999999542 2223 3333333 5554332 2334555565555544
Q ss_pred cccchHHHHHHHHHHHHHHHh
Q 046033 393 EQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 393 ~~~~~~~~~~~a~~l~~~~~~ 413 (434)
. |+.++++.+..++.+++
T Consensus 131 ~---d~~l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 131 Y---DKEIADSVKSYMESNAQ 148 (159)
T ss_dssp T---CHHHHHHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHHHHH
Confidence 2 47888888888877654
No 142
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=33.95 E-value=75 Score=24.93 Aligned_cols=86 Identities=10% Similarity=0.081 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhC--CCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHH
Q 046033 6 PYLALAKKLSQQ--NFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFD 83 (434)
Q Consensus 6 p~l~lA~~L~~~--Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
-++.+|+.|.+. ||++. +|. .....+.+. .|+....+. . ....
T Consensus 25 ~~v~~ak~~~~ll~Gf~l~-AT~-gTa~~L~e~------~Gl~v~~v~---------k--------~~eG---------- 69 (152)
T 1b93_A 25 MLMSWVERHQPLLEQHVLY-ATG-TTGNLISRA------TGMNVNAML---------S--------GPMG---------- 69 (152)
T ss_dssp HHHHHHHHTHHHHTTSEEE-EET-THHHHHHHH------HCCCCEEEC---------C--------GGGT----------
T ss_pred HHHHHHHHHHHHhCCCEEE-Ecc-HHHHHHHHH------hCceeEEEE---------e--------cCCC----------
Confidence 468899999999 99765 554 444555441 345544440 0 0000
Q ss_pred HhHHHHHHHHhhcCCCEEEEcCC--Cc--------hHHHHHHHcCCcEEEEecc
Q 046033 84 AAKPAFCNVLETLKPTLVIYDLF--QP--------WAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 84 ~~~~~~~~~l~~~~pDlVi~d~~--~~--------~~~~~A~~~giP~v~~~~~ 127 (434)
-.+.+.+.+++-+.|+||...- .. .-..+|-..+||+++....
T Consensus 70 -G~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~lat 122 (152)
T 1b93_A 70 -GDQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVAT 122 (152)
T ss_dssp -HHHHHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSHHH
T ss_pred -CCchHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCHHH
Confidence 1345778999999999997633 21 1356777889999965433
No 143
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=33.42 E-value=72 Score=27.09 Aligned_cols=39 Identities=8% Similarity=0.009 Sum_probs=26.3
Q ss_pred HHHHHHHHhhc--CCCEEEEcCC--CchHHHHHHHcCCcEEEE
Q 046033 86 KPAFCNVLETL--KPTLVIYDLF--QPWAAEAAYQHDIAAVAF 124 (434)
Q Consensus 86 ~~~~~~~l~~~--~pDlVi~d~~--~~~~~~~A~~~giP~v~~ 124 (434)
.+.+.+.+++. ++|+|++=.. .+.+..+|..+|+|++..
T Consensus 75 ~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~v 117 (234)
T 3m3h_A 75 AAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYV 117 (234)
T ss_dssp HHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEE
Confidence 44455555554 7899987622 356788899999998753
No 144
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=33.02 E-value=76 Score=27.13 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=26.5
Q ss_pred HHHHHHHHhhc--CCCEEEEcC--CCchHHHHHHHcCCcEEEE
Q 046033 86 KPAFCNVLETL--KPTLVIYDL--FQPWAAEAAYQHDIAAVAF 124 (434)
Q Consensus 86 ~~~~~~~l~~~--~pDlVi~d~--~~~~~~~~A~~~giP~v~~ 124 (434)
.+.+.+.+++. ++|+|++=. -.+.+..+|+.+|+|++..
T Consensus 87 ~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~v 129 (243)
T 3dez_A 87 ENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYI 129 (243)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEE
Confidence 34444555554 789998652 2256778899999998753
No 145
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=32.56 E-value=2.5e+02 Score=24.88 Aligned_cols=85 Identities=9% Similarity=-0.038 Sum_probs=48.8
Q ss_pred HHHHHHHhCCCEEEEEeCCCch--hhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHHHhH
Q 046033 9 ALAKKLSQQNFHIYFCSTPINL--QSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFDAAK 86 (434)
Q Consensus 9 ~lA~~L~~~Gh~V~~~~~~~~~--~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (434)
.|+++|.++||+|+.++..... +..... ..-...+++++...+. + .
T Consensus 25 ~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~~~~v~~~~~Dl~-------------------d------------~ 72 (346)
T 3i6i_A 25 FVATASLDAHRPTYILARPGPRSPSKAKIF-KALEDKGAIIVYGLIN-------------------E------------Q 72 (346)
T ss_dssp HHHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHHHTTCEEEECCTT-------------------C------------H
T ss_pred HHHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHHhCCcEEEEeecC-------------------C------------H
Confidence 5788999999999999876511 111100 0000156777554100 0 1
Q ss_pred HHHHHHHhhcCCCEEEEcCCC------chHHHHHHHcC-CcEEEEe
Q 046033 87 PAFCNVLETLKPTLVIYDLFQ------PWAAEAAYQHD-IAAVAFV 125 (434)
Q Consensus 87 ~~~~~~l~~~~pDlVi~d~~~------~~~~~~A~~~g-iP~v~~~ 125 (434)
..+.+++++.++|+||+-... ...+.+|...| ++.++.+
T Consensus 73 ~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S 118 (346)
T 3i6i_A 73 EAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPS 118 (346)
T ss_dssp HHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECS
T ss_pred HHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeec
Confidence 234456666689999986321 12356677778 8887753
No 146
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=31.64 E-value=9.9 Score=19.20 Aligned_cols=17 Identities=24% Similarity=0.583 Sum_probs=13.7
Q ss_pred CcchHHHHHHhCCcEEe
Q 046033 331 GWGSTVEGIMYGVPIIA 347 (434)
Q Consensus 331 G~~s~~eal~~GvP~v~ 347 (434)
|.|+++..++.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888888888765
No 147
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=31.55 E-value=81 Score=23.23 Aligned_cols=41 Identities=12% Similarity=0.206 Sum_probs=25.8
Q ss_pred HHHHHhhcCCCEEEEcCCCc---hHHHHHHH----cCCcEEEEecchH
Q 046033 89 FCNVLETLKPTLVIYDLFQP---WAAEAAYQ----HDIAAVAFVTIAA 129 (434)
Q Consensus 89 ~~~~l~~~~pDlVi~d~~~~---~~~~~A~~----~giP~v~~~~~~~ 129 (434)
..+.++..+||+||.|.... .+..+.+. .++|++.++....
T Consensus 46 a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 46 AVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp HHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred HHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 33455567899999994432 34433333 4799998876543
No 148
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=31.37 E-value=88 Score=28.39 Aligned_cols=35 Identities=11% Similarity=0.070 Sum_probs=22.8
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEe
Q 046033 242 SVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVR 278 (434)
Q Consensus 242 ~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 278 (434)
++++++.|+.+. -..+..+.++|.+.|+++.+.+.
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcC
Confidence 477777765432 23345577888888888877764
No 149
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=31.32 E-value=2.1e+02 Score=23.13 Aligned_cols=138 Identities=22% Similarity=0.229 Sum_probs=74.9
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhcc
Q 046033 241 SSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGH 320 (434)
Q Consensus 241 ~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~ 320 (434)
-|.|-|-+||.+ +-+..++....++..|..+-+.+... ...|+.+. .|+.+. ..
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~-------------~~~~~a---~~ 66 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA--------HRTPDRMF-------------EYAKNA---EE 66 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHH-------------HHHHHT---TT
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--------cCCHHHHH-------------HHHHHH---Hh
Confidence 467888888865 45667777778877787755544432 22343221 111110 00
Q ss_pred cCcceEEeccCc-c---hHHHHHHhCCcEEeccCCC---ChhhHHHHHHhh--cee--eeecccccCCcccHHHHHHHHH
Q 046033 321 GSIGGFISHCGW-G---STVEGIMYGVPIIAVPMVL---DQLFNAKMVADI--GVG--LEVPRDEINQRVRKEELARVFK 389 (434)
Q Consensus 321 ~~~~~~I~hgG~-~---s~~eal~~GvP~v~~P~~~---dq~~na~~~~~~--G~g--~~~~~~~~~~~~~~~~l~~~v~ 389 (434)
-.++++|.=.|. + ++..+ ..-+|+|.+|... +...-..-+.+. |+. .+-. .+..++.-++..|.
T Consensus 67 ~g~~ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I----d~~~nAa~lAaqIl 141 (183)
T 1o4v_A 67 RGIEVIIAGAGGAAHLPGMVAS-ITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAI----NNAKNAGILAASIL 141 (183)
T ss_dssp TTCCEEEEEEESSCCHHHHHHH-HCSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCT----TCHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcccccHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEec----CCchHHHHHHHHHH
Confidence 112336654442 2 33333 3678999999643 222222334454 643 2221 23456666766666
Q ss_pred HHhcccchHHHHHHHHHHHHHHHh
Q 046033 390 QVVEQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 390 ~ll~~~~~~~~~~~a~~l~~~~~~ 413 (434)
.+ . +++++++.+..++.+++
T Consensus 142 a~-~---d~~l~~kL~~~r~~~~~ 161 (183)
T 1o4v_A 142 GI-K---YPEIARKVKEYKERMKR 161 (183)
T ss_dssp HT-T---CHHHHHHHHHHHHHHHH
T ss_pred hc-C---CHHHHHHHHHHHHHHHH
Confidence 43 4 57888888888888766
No 150
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=31.10 E-value=57 Score=27.54 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=29.3
Q ss_pred HHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEec
Q 046033 87 PAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFVT 126 (434)
Q Consensus 87 ~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~ 126 (434)
....+.++..+.|+||.+ ..+..+|+++|+|.+.+.+
T Consensus 144 ~~~i~~l~~~G~~vVVG~---~~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 144 RGQINELKANGTEAVVGA---GLITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHTTCCEEEES---HHHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHCCCCEEECC---HHHHHHHHHcCCcEEEECC
Confidence 344445556689999999 4579999999999998874
No 151
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=31.03 E-value=1.6e+02 Score=26.36 Aligned_cols=80 Identities=13% Similarity=0.129 Sum_probs=50.5
Q ss_pred HHHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhc
Q 046033 335 TVEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVEQEEGQQIKRKAKELSESIKKK 414 (434)
Q Consensus 335 ~~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~ 414 (434)
+..|-.+|+|+-++....-.+..+..+..+|+-... ++++.+ ..++.++. .-+ .+.++++++.+.+.
T Consensus 240 v~aar~aG~~vgvcge~~~dp~~~~~l~~lG~~~~s--------i~p~~i-~~~~~~~~---~~~-~~~~~~~~~~~l~~ 306 (324)
T 2xz9_A 240 IDAAHKEGKFAAMCGEMAGDPLAAVILLGLGLDEFS--------MSATSI-PEIKNIIR---NVE-YEKAKEIAEKALNM 306 (324)
T ss_dssp HHHHHHTTCEEEECSGGGGCHHHHHHHHHHTCCEEE--------ECGGGH-HHHHHHHT---TSC-HHHHHHHHHHHHTC
T ss_pred HHHHHHHCCceeecCccCCCHHHHHHHHHCCCCEEE--------EChhHH-HHHHHHHH---HcC-HHHHHHHHHHHHcC
Confidence 445568899997776554355666777777765422 355554 33455554 122 45677888888776
Q ss_pred c-hHHHHHHHHHHH
Q 046033 415 G-DDEEINVVEKLL 427 (434)
Q Consensus 415 ~-~~~~~~~ve~l~ 427 (434)
. ..++..+++.+.
T Consensus 307 ~~~~~v~~~~~~~~ 320 (324)
T 2xz9_A 307 SEAREIEKMMKDVI 320 (324)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 6 777777777654
No 152
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=30.77 E-value=33 Score=27.88 Aligned_cols=31 Identities=10% Similarity=-0.005 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCCchhhhhh
Q 046033 5 TPYLALAKKLSQQNFHIYFCSTPINLQSMSQ 35 (434)
Q Consensus 5 ~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~ 35 (434)
+=...+.+.|+++|++|+++.++...+++..
T Consensus 16 ~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 16 ININHYIVELKQHFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp GGHHHHHHHHTTTSSCEEEEECGGGGGTSCG
T ss_pred HHHHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 3457889999999999999999988877766
No 153
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=30.43 E-value=55 Score=28.49 Aligned_cols=35 Identities=11% Similarity=0.075 Sum_probs=23.8
Q ss_pred HHHhhcCCCEEEEcCCC--chHHHHHHHcCCcEEEEe
Q 046033 91 NVLETLKPTLVIYDLFQ--PWAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~--~~~~~~A~~~giP~v~~~ 125 (434)
+.+...+||+||+.... ......-+..|||++.+.
T Consensus 53 E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (283)
T 2r79_A 53 EGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLS 89 (283)
T ss_dssp HHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECC
T ss_pred HHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEec
Confidence 45666899999987432 223445566899998764
No 154
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=30.16 E-value=1.1e+02 Score=21.38 Aligned_cols=39 Identities=21% Similarity=0.174 Sum_probs=24.2
Q ss_pred HHHHhhcCCCEEEEcCCCc--hHHHHHHH-----cCCcEEEEecch
Q 046033 90 CNVLETLKPTLVIYDLFQP--WAAEAAYQ-----HDIAAVAFVTIA 128 (434)
Q Consensus 90 ~~~l~~~~pDlVi~d~~~~--~~~~~A~~-----~giP~v~~~~~~ 128 (434)
.+.++..+||+||.|...+ .+..+.+. -.+|++.++...
T Consensus 38 ~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 83 (116)
T 3a10_A 38 LKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYS 83 (116)
T ss_dssp HHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCG
T ss_pred HHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCc
Confidence 3455667899999995433 33333333 257888877553
No 155
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=29.95 E-value=95 Score=22.02 Aligned_cols=39 Identities=18% Similarity=0.302 Sum_probs=24.4
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHHc-----CCcEEEEecchH
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQH-----DIAAVAFVTIAA 129 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~~-----giP~v~~~~~~~ 129 (434)
+.++..+||+||.|...+ .+..+.+.+ ++|++.++....
T Consensus 41 ~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (120)
T 1tmy_A 41 EKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ 86 (120)
T ss_dssp HHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTC
T ss_pred HHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCC
Confidence 445556899999995543 234444332 588888776543
No 156
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=29.82 E-value=93 Score=22.97 Aligned_cols=39 Identities=21% Similarity=0.265 Sum_probs=24.5
Q ss_pred HHHHhhcCCCEEEEcCCCc--hHHHHHHHc-------CCcEEEEecch
Q 046033 90 CNVLETLKPTLVIYDLFQP--WAAEAAYQH-------DIAAVAFVTIA 128 (434)
Q Consensus 90 ~~~l~~~~pDlVi~d~~~~--~~~~~A~~~-------giP~v~~~~~~ 128 (434)
.+.++..+||+||.|...+ .+..+.+.+ .+|++.++...
T Consensus 40 l~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 87 (138)
T 3c3m_A 40 LEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKP 87 (138)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSC
T ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCC
Confidence 3455667899999995433 344444332 57888876543
No 157
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=29.38 E-value=3.3e+02 Score=24.83 Aligned_cols=97 Identities=6% Similarity=-0.071 Sum_probs=50.2
Q ss_pred HHHHHHHhCC-CEEEEEeCCCchhh---hhhhhcccC-CCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHH
Q 046033 9 ALAKKLSQQN-FHIYFCSTPINLQS---MSQNLQEKF-STSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFD 83 (434)
Q Consensus 9 ~lA~~L~~~G-h~V~~~~~~~~~~~---v~~~~~~~~-~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (434)
.+++.|.+.| .+|.+++.+...+. ..+...+.+ ..|+++..+ + +.... .......+
T Consensus 23 ~l~~~l~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~--~----~~~~~----------p~~~~v~~--- 83 (387)
T 3bfj_A 23 VVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIF--D----GVEPN----------PKDTNVRD--- 83 (387)
T ss_dssp GHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEE--C----CCCSS----------CBHHHHHH---
T ss_pred HHHHHHHHcCCCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEE--C----CccCC----------CCHHHHHH---
Confidence 4567777777 78888886643332 111100011 156777555 2 22111 12223333
Q ss_pred HhHHHHHHHHhhcCCCEEEEc---CCCchHHHHHHH------------------cCCcEEEEecchH
Q 046033 84 AAKPAFCNVLETLKPTLVIYD---LFQPWAAEAAYQ------------------HDIAAVAFVTIAA 129 (434)
Q Consensus 84 ~~~~~~~~~l~~~~pDlVi~d---~~~~~~~~~A~~------------------~giP~v~~~~~~~ 129 (434)
..+.+++.++|+||+= .....+..+|.. .++|+|.+.++..
T Consensus 84 -----~~~~~~~~~~d~IIavGGGsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~g 145 (387)
T 3bfj_A 84 -----GLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAG 145 (387)
T ss_dssp -----HHHHHHHTTCCEEEEEESHHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTT
T ss_pred -----HHHHHHhcCCCEEEEeCCcchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCC
Confidence 3366777899999854 222344444443 3788888777663
No 158
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=29.37 E-value=77 Score=17.52 Aligned_cols=29 Identities=7% Similarity=0.256 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 046033 382 EELARVFKQVVEQEEGQQIKRKAKELSESIK 412 (434)
Q Consensus 382 ~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~ 412 (434)
-++.++|.+++.. +........+|++.+.
T Consensus 4 nQLE~kVEeLl~~--n~~Le~eV~rLk~ll~ 32 (34)
T 2oxj_A 4 XQLEXKVXELLXK--NXHLEXEVXRLKXLVX 32 (34)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHh--hhhHHHHHHHHHHHHh
Confidence 4678888888874 5677888888877653
No 159
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=29.32 E-value=86 Score=23.81 Aligned_cols=40 Identities=18% Similarity=0.288 Sum_probs=25.3
Q ss_pred HHHHHhhcCCCEEEEcCCCc--hHHHHHHH-------cCCcEEEEecch
Q 046033 89 FCNVLETLKPTLVIYDLFQP--WAAEAAYQ-------HDIAAVAFVTIA 128 (434)
Q Consensus 89 ~~~~l~~~~pDlVi~d~~~~--~~~~~A~~-------~giP~v~~~~~~ 128 (434)
..+.++..+||+||.|...+ .+..+++. .++|++.++...
T Consensus 43 al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 43 AVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 33566778899999995432 33333332 368888877544
No 160
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=29.04 E-value=53 Score=29.10 Aligned_cols=30 Identities=17% Similarity=0.123 Sum_probs=24.4
Q ss_pred CcceEEeccCcchHHHHHH------hCCcEEeccCC
Q 046033 322 SIGGFISHCGWGSTVEGIM------YGVPIIAVPMV 351 (434)
Q Consensus 322 ~~~~~I~hgG~~s~~eal~------~GvP~v~~P~~ 351 (434)
..+.+|.-||=||+.|++. .++|+.++|..
T Consensus 63 ~~d~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 63 KVDLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp TCSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred CCCEEEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 3456999999999999864 56899999963
No 161
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=28.58 E-value=3.1e+02 Score=24.45 Aligned_cols=28 Identities=21% Similarity=0.133 Sum_probs=22.5
Q ss_pred hHHHHHHHHHHHhCCCEEEEEeCCCchh
Q 046033 4 ITPYLALAKKLSQQNFHIYFCSTPINLQ 31 (434)
Q Consensus 4 ~~p~l~lA~~L~~~Gh~V~~~~~~~~~~ 31 (434)
..-...+|..|+++|++|.++..+....
T Consensus 30 Tt~a~~lA~~la~~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 30 TTTSCSLAIQLAKVRRSVLLLSTDPAHN 57 (334)
T ss_dssp HHHHHHHHHHHTTSSSCEEEEECCSSCH
T ss_pred HHHHHHHHHHHHhCCCcEEEEECCCCCC
Confidence 3456788999999999999999885433
No 162
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=28.36 E-value=35 Score=30.57 Aligned_cols=22 Identities=9% Similarity=0.144 Sum_probs=19.2
Q ss_pred HHHHHHHHhCCCEEEEEeCCCc
Q 046033 8 LALAKKLSQQNFHIYFCSTPIN 29 (434)
Q Consensus 8 l~lA~~L~~~Gh~V~~~~~~~~ 29 (434)
.++|+++.++|++|+|++++..
T Consensus 69 ~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 69 ATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHCCCEEEEEecCCC
Confidence 4789999999999999998644
No 163
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=28.30 E-value=1e+02 Score=21.91 Aligned_cols=39 Identities=8% Similarity=0.134 Sum_probs=24.6
Q ss_pred HHHHhhcCCCEEEEcCCCc--hHHHHHHHc----CCcEEEEecch
Q 046033 90 CNVLETLKPTLVIYDLFQP--WAAEAAYQH----DIAAVAFVTIA 128 (434)
Q Consensus 90 ~~~l~~~~pDlVi~d~~~~--~~~~~A~~~----giP~v~~~~~~ 128 (434)
.+.++..+||+||.|...+ .+..+.+.+ .+|++.++...
T Consensus 39 ~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 39 REIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp HHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 3456667899999995433 344444433 57888776554
No 164
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=28.02 E-value=43 Score=27.74 Aligned_cols=30 Identities=10% Similarity=0.005 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCchhhhhh
Q 046033 6 PYLALAKKLSQQNFHIYFCSTPINLQSMSQ 35 (434)
Q Consensus 6 p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~ 35 (434)
-.+.+.+.|+++|++|+++.++...+++..
T Consensus 23 k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~ 52 (201)
T 3lqk_A 23 EVLPQMERLVELGAKVTPFVTHTVQTTDTK 52 (201)
T ss_dssp GTHHHHHHHHHTTCEEEEECSSCSCCTTCC
T ss_pred HHHHHHHHHhhCCCEEEEEEChhHHHHHHH
Confidence 357889999999999999999877666654
No 165
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=27.83 E-value=1.4e+02 Score=25.03 Aligned_cols=44 Identities=20% Similarity=0.116 Sum_probs=30.6
Q ss_pred chhhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcE
Q 046033 228 DTKIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSF 273 (434)
Q Consensus 228 ~~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~ 273 (434)
.+.+.+|+.. .+++++|..++........+..+.++|++.|..+
T Consensus 21 ~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~ 64 (229)
T 1fy2_A 21 LPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNV 64 (229)
T ss_dssp HHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEE
T ss_pred HHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEE
Confidence 4556777753 3459999988743334566777889998888654
No 166
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=27.68 E-value=3.8e+02 Score=25.18 Aligned_cols=144 Identities=15% Similarity=0.041 Sum_probs=69.0
Q ss_pred CceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEe-cccCHHHHhc
Q 046033 241 SSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQ-GWAPQAKILG 319 (434)
Q Consensus 241 ~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~-~~~p~~~il~ 319 (434)
++++.|+.|..+ ...+..|.+.|.++.++-.. +.+.+.+-. ...++.+. .-....+ +.
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~-----------~~~~~~~l~--~~~~i~~~~~~~~~~~-l~ 71 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT-----------FIPQFTVWA--NEGMLTLVEGPFDETL-LD 71 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS-----------CCHHHHHHH--TTTSCEEEESSCCGGG-GT
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC-----------CCHHHHHHH--hcCCEEEEECCCCccc-cC
Confidence 568888777543 33445566677776655321 111221111 11233221 2122222 44
Q ss_pred ccCcceEEeccCcch-----HHHHHHhCCcEEec--cCCCChhhHHHHHHhh--ceeeeecccccCCccc-HHHHHHHHH
Q 046033 320 HGSIGGFISHCGWGS-----TVEGIMYGVPIIAV--PMVLDQLFNAKMVADI--GVGLEVPRDEINQRVR-KEELARVFK 389 (434)
Q Consensus 320 ~~~~~~~I~hgG~~s-----~~eal~~GvP~v~~--P~~~dq~~na~~~~~~--G~g~~~~~~~~~~~~~-~~~l~~~v~ 389 (434)
. ++++|..-|.-. ..+|-..|+|+-++ |...+..+-| .+.+- -+|+.-. -++.. ...+++.|+
T Consensus 72 ~--~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIsT~----Gksp~la~~ir~~ie 144 (457)
T 1pjq_A 72 S--CWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVSSG----GTSPVLARLLREKLE 144 (457)
T ss_dssp T--CSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEECT----TSCHHHHHHHHHHHH
T ss_pred C--ccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEECC----CCChHHHHHHHHHHH
Confidence 3 344887777543 44566679997333 3333222100 00112 2444421 12222 567888888
Q ss_pred HHhcccchHHHHHHHHHHHHHHHh
Q 046033 390 QVVEQEEGQQIKRKAKELSESIKK 413 (434)
Q Consensus 390 ~ll~~~~~~~~~~~a~~l~~~~~~ 413 (434)
+.|..+ -..+-+.+.++++.+++
T Consensus 145 ~~l~~~-~~~~~~~~~~~R~~~~~ 167 (457)
T 1pjq_A 145 SLLPQH-LGQVARYAGQLRARVKK 167 (457)
T ss_dssp HHSCTT-HHHHHHHHHHHHHHHHH
T ss_pred Hhcchh-HHHHHHHHHHHHHHHHh
Confidence 888621 24566666666666665
No 167
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=27.56 E-value=27 Score=30.66 Aligned_cols=28 Identities=18% Similarity=0.197 Sum_probs=22.9
Q ss_pred cceEEeccCcchHHHHHHh--C-CcEEeccC
Q 046033 323 IGGFISHCGWGSTVEGIMY--G-VPIIAVPM 350 (434)
Q Consensus 323 ~~~~I~hgG~~s~~eal~~--G-vP~v~~P~ 350 (434)
++++|+=||=||++.|+.. + +|++.+..
T Consensus 69 ~DlvIvlGGDGT~L~aa~~~~~~~PilGIN~ 99 (278)
T 1z0s_A 69 FDFIVSVGGDGTILRILQKLKRCPPIFGINT 99 (278)
T ss_dssp SSEEEEEECHHHHHHHHTTCSSCCCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHhCCCCcEEEECC
Confidence 4559999999999998765 3 89998864
No 168
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=27.50 E-value=1.1e+02 Score=27.41 Aligned_cols=29 Identities=21% Similarity=0.150 Sum_probs=23.6
Q ss_pred cceEEeccCcchHHHHHH------hCCcEEeccCC
Q 046033 323 IGGFISHCGWGSTVEGIM------YGVPIIAVPMV 351 (434)
Q Consensus 323 ~~~~I~hgG~~s~~eal~------~GvP~v~~P~~ 351 (434)
++++|.-||=||+.|++. .++|+.++|..
T Consensus 81 ~d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 81 YDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp CSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred CCEEEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 456999999999999863 46799999963
No 169
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=27.17 E-value=88 Score=23.70 Aligned_cols=32 Identities=6% Similarity=-0.069 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHhCCCEEEEEeCCCchhhhhh
Q 046033 4 ITPYLALAKKLSQQNFHIYFCSTPINLQSMSQ 35 (434)
Q Consensus 4 ~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~ 35 (434)
....+.+|....+.||+|+++.+......+.+
T Consensus 32 ~~~al~lA~~A~a~g~eV~vFf~~dGV~~l~k 63 (134)
T 3mc3_A 32 TYAPLFMASISASMEYETSVFFMIXGPXLLDX 63 (134)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTGGGGGBH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEeCcHHHHhh
Confidence 45677889988999999999988766665554
No 170
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=27.04 E-value=1.1e+02 Score=23.17 Aligned_cols=41 Identities=27% Similarity=0.162 Sum_probs=25.9
Q ss_pred HHHHHhhcCCCEEEEcCCCc--hHHHHHHHc-----CCcEEEEecchH
Q 046033 89 FCNVLETLKPTLVIYDLFQP--WAAEAAYQH-----DIAAVAFVTIAA 129 (434)
Q Consensus 89 ~~~~l~~~~pDlVi~d~~~~--~~~~~A~~~-----giP~v~~~~~~~ 129 (434)
..+.++..+||+||.|...+ .+..+.+.+ .+|++.++....
T Consensus 43 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 43 ALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp HHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred HHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 33566677899999994433 333333332 689888876654
No 171
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=26.98 E-value=38 Score=26.63 Aligned_cols=26 Identities=12% Similarity=-0.041 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHhCCCEEEEEeCCCch
Q 046033 4 ITPYLALAKKLSQQNFHIYFCSTPINL 30 (434)
Q Consensus 4 ~~p~l~lA~~L~~~Gh~V~~~~~~~~~ 30 (434)
+.|++.+++.|.++|.+|+++ .....
T Consensus 35 ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 35 IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 579999999999999999998 55443
No 172
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=26.94 E-value=1e+02 Score=23.10 Aligned_cols=43 Identities=19% Similarity=0.135 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCEEEEcCCCc--hHHHHHHH-----cCCcEEEEecchH
Q 046033 87 PAFCNVLETLKPTLVIYDLFQP--WAAEAAYQ-----HDIAAVAFVTIAA 129 (434)
Q Consensus 87 ~~~~~~l~~~~pDlVi~d~~~~--~~~~~A~~-----~giP~v~~~~~~~ 129 (434)
.+..+.++..+||+||.|.... .+..+.+. -++|++.++....
T Consensus 56 ~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 56 QEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 3445667778899999994432 34444433 2588888776543
No 173
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=26.86 E-value=79 Score=28.48 Aligned_cols=72 Identities=11% Similarity=0.052 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhcccCcceEEeccCcch
Q 046033 255 SKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGS 334 (434)
Q Consensus 255 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s 334 (434)
+.+....+.+++.+...+.||.+.++.+. .+ +.++++...+-+++.. +|-.+-...
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~----~r------------------lL~~lD~~~i~~~PK~--~~GySDiTa 118 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYNS----NG------------------LLKYLDYDLIRENPKF--FCGYSDITA 118 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG----GG------------------GGGGCCHHHHHTSCCE--EEECGGGHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH----HH------------------HHhhcChhHHHhCCeE--EEEecchHH
Confidence 35778889999999888999998875432 11 2244444444444444 665555555
Q ss_pred HHHHHH--hCCcEEeccC
Q 046033 335 TVEGIM--YGVPIIAVPM 350 (434)
Q Consensus 335 ~~eal~--~GvP~v~~P~ 350 (434)
+.-+++ .|++.+.-|.
T Consensus 119 L~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 119 LNNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHHHHCBCEEECCC
T ss_pred HHHHHHHhhCCcEEEccc
Confidence 555555 3666555453
No 174
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=26.61 E-value=69 Score=29.14 Aligned_cols=29 Identities=17% Similarity=0.365 Sum_probs=20.1
Q ss_pred ccCcceEEec-cCcchHHHHHHhCCcEEeccC
Q 046033 320 HGSIGGFISH-CGWGSTVEGIMYGVPIIAVPM 350 (434)
Q Consensus 320 ~~~~~~~I~h-gG~~s~~eal~~GvP~v~~P~ 350 (434)
.+++ +|++ .++.....|-..|+|.+.+-.
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~ 143 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRW 143 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEec
Confidence 3554 7776 455566677789999988754
No 175
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=26.48 E-value=1.2e+02 Score=21.50 Aligned_cols=38 Identities=21% Similarity=0.222 Sum_probs=24.0
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHH----cCCcEEEEecch
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQ----HDIAAVAFVTIA 128 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~----~giP~v~~~~~~ 128 (434)
+.++..+||+||.|...+ .+..+++. -.+|++.++...
T Consensus 41 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 84 (123)
T 1xhf_A 41 QILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRD 84 (123)
T ss_dssp HHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCC
T ss_pred HHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCC
Confidence 455667899999995433 33433333 368888776554
No 176
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=26.37 E-value=42 Score=29.33 Aligned_cols=21 Identities=19% Similarity=0.251 Sum_probs=17.4
Q ss_pred HHHHHHHhCCCEEEEEeCCCc
Q 046033 9 ALAKKLSQQNFHIYFCSTPIN 29 (434)
Q Consensus 9 ~lA~~L~~~Gh~V~~~~~~~~ 29 (434)
.|+++|.++||+|+.++....
T Consensus 15 ~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 15 ALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp HHHHHHHHTTCEEEEEESSCC
T ss_pred HHHHHHHHCCCEEEEEECCCC
Confidence 578999999999999986533
No 177
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=26.34 E-value=92 Score=22.89 Aligned_cols=40 Identities=23% Similarity=0.245 Sum_probs=25.2
Q ss_pred HHHHhhcCCCEEEEcCCCc-------hHHHHHHH-----cCCcEEEEecchH
Q 046033 90 CNVLETLKPTLVIYDLFQP-------WAAEAAYQ-----HDIAAVAFVTIAA 129 (434)
Q Consensus 90 ~~~l~~~~pDlVi~d~~~~-------~~~~~A~~-----~giP~v~~~~~~~ 129 (434)
.+.++..+||+||.|.... .+..+.+. -++|++.++....
T Consensus 40 ~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 91 (140)
T 2qr3_A 40 STVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYAD 91 (140)
T ss_dssp HHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGG
T ss_pred HHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 3556667899999995432 33333332 2689988876543
No 178
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=26.26 E-value=1.7e+02 Score=24.51 Aligned_cols=32 Identities=22% Similarity=0.204 Sum_probs=23.2
Q ss_pred CCCEE-EEcCC-CchHHHHHHHcCCcEEEEecch
Q 046033 97 KPTLV-IYDLF-QPWAAEAAYQHDIAAVAFVTIA 128 (434)
Q Consensus 97 ~pDlV-i~d~~-~~~~~~~A~~~giP~v~~~~~~ 128 (434)
.||+| |.|+. ...++.=|.++|||+|.+.-+.
T Consensus 149 ~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn 182 (218)
T 3r8n_B 149 LPDALFVIDADHEHIAIKEANNLGIPVFAIVDTN 182 (218)
T ss_dssp CCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSS
T ss_pred CCCeEEecCcccccHHHHHHHHhCCCEEEEEeCc
Confidence 58866 56643 3466778889999999876543
No 179
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=26.22 E-value=94 Score=23.53 Aligned_cols=47 Identities=13% Similarity=0.158 Sum_probs=35.0
Q ss_pred hCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhc
Q 046033 341 YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVE 393 (434)
Q Consensus 341 ~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~ 393 (434)
..+|+|++-... ......++.++|+--.+. +-+++++|.++|+++++
T Consensus 86 ~~ipvI~lTa~~-~~~~~~~~~~~Ga~~yl~-----KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEA-KREQIIEAAQAGVNGYIV-----KPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSC-CHHHHHHHHHTTCCEEEE-----SSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCC-CHHHHHHHHHCCCCEEEE-----CCCCHHHHHHHHHHHHh
Confidence 468988885444 445666777788876664 44899999999999986
No 180
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=26.08 E-value=1.1e+02 Score=21.93 Aligned_cols=38 Identities=18% Similarity=0.357 Sum_probs=23.9
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHH-----cCCcEEEEecch
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQ-----HDIAAVAFVTIA 128 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~-----~giP~v~~~~~~ 128 (434)
+.++..+||+||.|...+ .+..+++. -.+|++.++...
T Consensus 41 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 41 DIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp HHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 445566899999995433 33433333 258888877654
No 181
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=26.03 E-value=51 Score=27.90 Aligned_cols=21 Identities=19% Similarity=0.414 Sum_probs=18.0
Q ss_pred HHHHHHHHhCCCEEEEEeCCC
Q 046033 8 LALAKKLSQQNFHIYFCSTPI 28 (434)
Q Consensus 8 l~lA~~L~~~Gh~V~~~~~~~ 28 (434)
.++|++|.++|++|++++.+.
T Consensus 38 ~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 38 FAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHCCCEEEEEECCc
Confidence 478999999999999987654
No 182
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=25.80 E-value=39 Score=28.23 Aligned_cols=30 Identities=20% Similarity=0.090 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCchhhhhh
Q 046033 6 PYLALAKKLSQQNFHIYFCSTPINLQSMSQ 35 (434)
Q Consensus 6 p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~ 35 (434)
=...+.+.|+++|++|.++.++...+++..
T Consensus 19 k~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 19 YGLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 367889999999999999999988887765
No 183
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=25.70 E-value=1.1e+02 Score=21.91 Aligned_cols=40 Identities=18% Similarity=-0.003 Sum_probs=24.4
Q ss_pred HHHHHHhhcCCCEEEEcCCC--chHHHHHHH-------cCCcEEEEecc
Q 046033 88 AFCNVLETLKPTLVIYDLFQ--PWAAEAAYQ-------HDIAAVAFVTI 127 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~~--~~~~~~A~~-------~giP~v~~~~~ 127 (434)
+..+.++..+||+||.|... ..+..+.+. .++|++.++..
T Consensus 38 ~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 38 DALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp HHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 33456667889999999432 233333332 35788877654
No 184
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=25.57 E-value=1e+02 Score=26.82 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=24.8
Q ss_pred HHHhhcCCCEEEEcCCCc---hHHHHHH----HcCCcEEEEecch
Q 046033 91 NVLETLKPTLVIYDLFQP---WAAEAAY----QHDIAAVAFVTIA 128 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~---~~~~~A~----~~giP~v~~~~~~ 128 (434)
+.++..+||+||.|...+ .+..+++ ..++|+|.++...
T Consensus 199 ~~~~~~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~~ 243 (286)
T 3n0r_A 199 EAVTRRTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAFP 243 (286)
T ss_dssp HHHHHCCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESCG
T ss_pred HHHHhCCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCCH
Confidence 456677899999996555 1222222 1289999988763
No 185
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=25.44 E-value=1.2e+02 Score=21.79 Aligned_cols=40 Identities=15% Similarity=-0.051 Sum_probs=24.7
Q ss_pred HHHHHhhc-CCCEEEEcCCCc---hHHHHHHHc-----CCcEEEEecch
Q 046033 89 FCNVLETL-KPTLVIYDLFQP---WAAEAAYQH-----DIAAVAFVTIA 128 (434)
Q Consensus 89 ~~~~l~~~-~pDlVi~d~~~~---~~~~~A~~~-----giP~v~~~~~~ 128 (434)
..+.++.. +||+||.|.... .+..+.+.+ ++|++.++...
T Consensus 41 a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (132)
T 2rdm_A 41 AIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHA 89 (132)
T ss_dssp HHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred HHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCc
Confidence 33555665 899999994432 234333332 58888877554
No 186
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=25.21 E-value=80 Score=17.38 Aligned_cols=27 Identities=7% Similarity=0.273 Sum_probs=19.7
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHHHH
Q 046033 383 ELARVFKQVVEQEEGQQIKRKAKELSESI 411 (434)
Q Consensus 383 ~l~~~v~~ll~~~~~~~~~~~a~~l~~~~ 411 (434)
++.++|.+++.. +........+|++.+
T Consensus 4 QLE~kVEeLl~~--n~~Le~EV~RLk~Ll 30 (33)
T 3m48_A 4 QLEAKVEELLSK--NWNLENEVARLKKLV 30 (33)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH--hHHHHHHHHHHHHHh
Confidence 577888888874 566777777777664
No 187
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=25.18 E-value=1e+02 Score=26.20 Aligned_cols=37 Identities=14% Similarity=0.180 Sum_probs=24.4
Q ss_pred HHHHhh--cCCCEEEEcC-------CCchHHHHHHHcCCcEEEEec
Q 046033 90 CNVLET--LKPTLVIYDL-------FQPWAAEAAYQHDIAAVAFVT 126 (434)
Q Consensus 90 ~~~l~~--~~pDlVi~d~-------~~~~~~~~A~~~giP~v~~~~ 126 (434)
.++++. .+||++++|- .+..|..+.-.+++|.|-+.=
T Consensus 98 l~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAK 143 (237)
T 3goc_A 98 LAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAK 143 (237)
T ss_dssp HHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEES
T ss_pred HHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeec
Confidence 344443 3699999992 223456666777899997653
No 188
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=24.90 E-value=1.4e+02 Score=20.97 Aligned_cols=39 Identities=21% Similarity=0.348 Sum_probs=24.3
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHH----cCCcEEEEecchH
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQ----HDIAAVAFVTIAA 129 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~----~giP~v~~~~~~~ 129 (434)
+.++..+||+||.|...+ .+..+++. -.+|++.++....
T Consensus 39 ~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 39 EQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp HHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred HHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 445566899999995433 33433333 4688888776543
No 189
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=24.28 E-value=99 Score=17.09 Aligned_cols=29 Identities=10% Similarity=0.297 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Q 046033 382 EELARVFKQVVEQEEGQQIKRKAKELSESIK 412 (434)
Q Consensus 382 ~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~ 412 (434)
.++.++|.+++.. +...-....+|++.+.
T Consensus 4 nQLEdkVEeLl~~--~~~Le~eV~RL~~ll~ 32 (34)
T 2hy6_A 4 KQLADAVEELASA--NYHLANAVARLAKAVG 32 (34)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh--hHHHHHHHHHHHHHhc
Confidence 3677888888873 4556666666766553
No 190
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=24.06 E-value=90 Score=23.42 Aligned_cols=32 Identities=9% Similarity=0.016 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHhCCCEE-EEEeCCCchhhhhh
Q 046033 4 ITPYLALAKKLSQQNFHI-YFCSTPINLQSMSQ 35 (434)
Q Consensus 4 ~~p~l~lA~~L~~~Gh~V-~~~~~~~~~~~v~~ 35 (434)
....+.+|.++.+.||+| .++...+......+
T Consensus 17 ~~~al~~a~a~~~~g~~v~~vff~~dGV~~~~~ 49 (130)
T 2hy5_A 17 SDSAYQFAKAALEKGHEIFRVFFYHDGVNNSTR 49 (130)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECGGGGGGGBS
T ss_pred HHHHHHHHHHHHhcCCeeCEEEEechHHHHHhc
Confidence 456788999999999999 99888766665554
No 191
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=24.05 E-value=2.5e+02 Score=25.58 Aligned_cols=75 Identities=9% Similarity=-0.005 Sum_probs=44.6
Q ss_pred HHHHHHHHHhCCCEEEEEeCCC-chhhhhhhhcccCCCCeEEEEecCCCCCCCCCCCCCCCCCCCccccHHHHHHHHHHh
Q 046033 7 YLALAKKLSQQNFHIYFCSTPI-NLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDPYNHTTKNIPRHLIPTLIEAFDAA 85 (434)
Q Consensus 7 ~l~lA~~L~~~Gh~V~~~~~~~-~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (434)
.+.+++++++.|++|.++..+. +.....- .. +++.+ + .. +
T Consensus 19 ~~~~~~a~~~~G~~~v~v~~~~~~~~~~~~-------ad-~~~~~--~----------~~-------d------------ 59 (403)
T 4dim_A 19 QLGLYKAAKELGIHTIAGTMPNAHKPCLNL-------AD-EISYM--D----------IS-------N------------ 59 (403)
T ss_dssp GHHHHHHHHHHTCEEEEEECSSCCHHHHHH-------CS-EEEEC--C----------TT-------C------------
T ss_pred HHHHHHHHHHCCCEEEEEcCCCCCCcchhh-------CC-eEEEe--c----------CC-------C------------
Confidence 4678899999999999987643 3222222 11 12222 1 00 0
Q ss_pred HHHHHHHHhhcCCCEEEEc---CCCchHHHHHHHcCCc
Q 046033 86 KPAFCNVLETLKPTLVIYD---LFQPWAAEAAYQHDIA 120 (434)
Q Consensus 86 ~~~~~~~l~~~~pDlVi~d---~~~~~~~~~A~~~giP 120 (434)
.+.+.++++..++|.|+.. ........+++.+|+|
T Consensus 60 ~~~l~~~~~~~~~d~v~~~~~~~~~~~~a~~~~~~gl~ 97 (403)
T 4dim_A 60 PDEVEQKVKDLNLDGAATCCLDTGIVSLARICDKENLV 97 (403)
T ss_dssp HHHHHHHTTTSCCSEEECCSCSTTHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHcCCCEEEeCCcchhHHHHHHHHHHcCcC
Confidence 1345567778899999963 2222345667788986
No 192
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=23.99 E-value=1.6e+02 Score=26.96 Aligned_cols=35 Identities=20% Similarity=0.033 Sum_probs=24.7
Q ss_pred eEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEec
Q 046033 243 VVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRF 279 (434)
Q Consensus 243 vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 279 (434)
+++++.||.+. -.-+..+..+|.+.|.++.+.+..
T Consensus 3 Ili~~~gt~Gh--v~p~~~La~~L~~~Gh~V~v~~~~ 37 (404)
T 3h4t_A 3 VLITGCGSRGD--TEPLVALAARLRELGADARMCLPP 37 (404)
T ss_dssp EEEEEESSHHH--HHHHHHHHHHHHHTTCCEEEEECG
T ss_pred EEEEeCCCCcc--HHHHHHHHHHHHHCCCeEEEEeCH
Confidence 77888887542 223455778898899998887653
No 193
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=23.93 E-value=44 Score=27.34 Aligned_cols=30 Identities=10% Similarity=0.104 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCCchhhhhh
Q 046033 6 PYLALAKKLSQQNFHIYFCSTPINLQSMSQ 35 (434)
Q Consensus 6 p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~ 35 (434)
=...+.++|+++|++|+++.++...+++..
T Consensus 16 k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 16 YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 357889999999999999999988888776
No 194
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=23.75 E-value=1e+02 Score=28.06 Aligned_cols=35 Identities=14% Similarity=0.069 Sum_probs=22.5
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEe
Q 046033 242 SVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVR 278 (434)
Q Consensus 242 ~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 278 (434)
++++++.|+.+. -..+..+..+|.+.|..+.+.+.
T Consensus 17 rIl~~~~~~~gh--~~~~~~La~~L~~~GheV~v~~~ 51 (398)
T 4fzr_A 17 RILVIAGCSEGF--VMPLVPLSWALRAAGHEVLVAAS 51 (398)
T ss_dssp EEEEECCSSHHH--HGGGHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEcCCCcch--HHHHHHHHHHHHHCCCEEEEEcC
Confidence 477777664332 12245577888888888877764
No 195
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=23.52 E-value=1.2e+02 Score=22.80 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCCEEEEcCCCc--hHHHHHHH-----cCCcEEEEecchH
Q 046033 87 PAFCNVLETLKPTLVIYDLFQP--WAAEAAYQ-----HDIAAVAFVTIAA 129 (434)
Q Consensus 87 ~~~~~~l~~~~pDlVi~d~~~~--~~~~~A~~-----~giP~v~~~~~~~ 129 (434)
.+..+.++..+||+||.|.... .+..+.+. -.+|++.++....
T Consensus 51 ~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 100 (152)
T 3eul_A 51 AAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDE 100 (152)
T ss_dssp HHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCC
Confidence 3445566777999999994432 33333333 2578888776543
No 196
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=23.45 E-value=2.5e+02 Score=21.98 Aligned_cols=49 Identities=12% Similarity=0.089 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhHHHHHHHHhhcCCCEEEEc-CCCchHHHHHHHcCCcEEE
Q 046033 75 IPTLIEAFDAAKPAFCNVLETLKPTLVIYD-LFQPWAAEAAYQHDIAAVA 123 (434)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~pDlVi~d-~~~~~~~~~A~~~giP~v~ 123 (434)
+..+...-........+.+.+.++++||+. .....+...-...||.++.
T Consensus 50 ~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~gI~~v~ 99 (159)
T 1ass_A 50 IQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVR 99 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSEEEESSCBCHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHHHHHHHHhhhhhhCCCeEEEECCccCHHHHHHHHHCCCEEEc
Confidence 334444444445566666777899999998 5556777777788998884
No 197
>1efd_N Ferrichrome-binding periplasmic protein; periplasmic binding protein-siderophore complex, FHUD complex with gallichrome; HET: GCR; 1.90A {Escherichia coli} SCOP: c.92.2.1 PDB: 1k7s_N* 1k2v_N* 1esz_A*
Probab=23.41 E-value=57 Score=27.96 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=22.6
Q ss_pred HHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEe
Q 046033 91 NVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~ 125 (434)
+.+...+||+||...........-+..| |++.+.
T Consensus 60 E~i~~l~PDLIi~~~~~~~~~~~L~~i~-pvv~~~ 93 (266)
T 1efd_N 60 ELLTEMKPSFMVWSAGYGPSPEMLARIA-PGRGFN 93 (266)
T ss_dssp HHHHHHCCSEEEEETTSSSCHHHHHHHS-CEEEEC
T ss_pred HHHHhcCCCEEEeccccHHHHHHHHhhC-CEEEec
Confidence 4555679999998643333344455678 998775
No 198
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=23.25 E-value=54 Score=26.79 Aligned_cols=44 Identities=20% Similarity=0.416 Sum_probs=30.4
Q ss_pred HHHhhceeeeecccccCCcccHHHHHHHHHHHhcc-cc---hHHHHHHHHHHHHHHHh
Q 046033 360 MVADIGVGLEVPRDEINQRVRKEELARVFKQVVEQ-EE---GQQIKRKAKELSESIKK 413 (434)
Q Consensus 360 ~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~-~~---~~~~~~~a~~l~~~~~~ 413 (434)
.=+..|+|+.+ |++++.++|.++++. ++ ...|+ +.-.+-..+++
T Consensus 107 Fe~~cGVGV~V---------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~ 154 (187)
T 3tl4_X 107 MNENSGVGIEI---------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKN 154 (187)
T ss_dssp HHHTTTTTCCC---------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHT
T ss_pred HHHHCCCCeEe---------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhc
Confidence 33445999888 799999999999962 11 13456 66666666664
No 199
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=23.09 E-value=77 Score=28.08 Aligned_cols=33 Identities=6% Similarity=0.122 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEE
Q 046033 9 ALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLID 49 (434)
Q Consensus 9 ~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~ 49 (434)
.+|..|.+.||+|+++.... .+.+.+ .|+....
T Consensus 16 ~~a~~L~~~g~~V~~~~r~~-~~~i~~-------~g~~~~~ 48 (312)
T 3hn2_A 16 YYGALLQRSGEDVHFLLRRD-YEAIAG-------NGLKVFS 48 (312)
T ss_dssp HHHHHHHHTSCCEEEECSTT-HHHHHH-------TCEEEEE
T ss_pred HHHHHHHHCCCeEEEEEcCc-HHHHHh-------CCCEEEc
Confidence 57889999999999998876 466666 6666643
No 200
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=22.76 E-value=1.3e+02 Score=21.33 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=21.8
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHHc-------CCcEEEEecc
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQH-------DIAAVAFVTI 127 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~~-------giP~v~~~~~ 127 (434)
+.++..+||+||.|...+ .+..+.+.+ .+|++.++..
T Consensus 39 ~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 39 SIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 455566899999995433 344333322 5788877654
No 201
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=22.72 E-value=1.1e+02 Score=28.18 Aligned_cols=39 Identities=18% Similarity=0.118 Sum_probs=25.4
Q ss_pred HHHhhcCCCEEEEc---CCCchHHHHHHHc------------------CCcEEEEecchH
Q 046033 91 NVLETLKPTLVIYD---LFQPWAAEAAYQH------------------DIAAVAFVTIAA 129 (434)
Q Consensus 91 ~~l~~~~pDlVi~d---~~~~~~~~~A~~~------------------giP~v~~~~~~~ 129 (434)
+.+++.++|+||+= .....+..+|..+ ++|+|.+.++..
T Consensus 82 ~~~~~~~~D~IIavGGGsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTag 141 (383)
T 3ox4_A 82 KILKDNNSDFVISLGGGSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAG 141 (383)
T ss_dssp HHHHHHTCSEEEEEESHHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSS
T ss_pred HHHHhcCcCEEEEeCCcHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCC
Confidence 56677799999865 2223444455554 888888776653
No 202
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=22.70 E-value=74 Score=15.87 Aligned_cols=15 Identities=7% Similarity=0.483 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHh
Q 046033 399 QIKRKAKELSESIKK 413 (434)
Q Consensus 399 ~~~~~a~~l~~~~~~ 413 (434)
...++.+++++.+++
T Consensus 12 dlqerlrklrkklrs 26 (27)
T 3twe_A 12 DLQERLRKLRKKLRS 26 (27)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 456677777776654
No 203
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=22.64 E-value=1e+02 Score=21.92 Aligned_cols=46 Identities=15% Similarity=0.133 Sum_probs=33.4
Q ss_pred hCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhc
Q 046033 341 YGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVE 393 (434)
Q Consensus 341 ~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~ 393 (434)
..+|++++ ..+.......+.+.|+--.+. +.++.+++..+|++++.
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~~g~~~~l~-----kp~~~~~l~~~i~~~~~ 124 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLKAHADEYVA-----KPVDADQLVERAGALIG 124 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHSTTCCSEEEE-----SSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEE--ecCCchhHHHHHHhCcchhee-----CCCCHHHHHHHHHHHHc
Confidence 47899888 444455556666777755554 44789999999999886
No 204
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=22.62 E-value=1.1e+02 Score=29.38 Aligned_cols=35 Identities=26% Similarity=0.339 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEe
Q 046033 7 YLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDL 50 (434)
Q Consensus 7 ~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~ 50 (434)
++.+|+.|.+.|.++. ++....+.+.. .|+....+
T Consensus 23 lvelAk~L~~lGfeI~--ATgGTak~L~e-------~GI~v~~V 57 (523)
T 3zzm_A 23 LVDLAQGLSAAGVEII--STGSTAKTIAD-------TGIPVTPV 57 (523)
T ss_dssp HHHHHHHHHHTTCEEE--ECHHHHHHHHT-------TTCCCEEH
T ss_pred HHHHHHHHHHCCCEEE--EcchHHHHHHH-------cCCceeec
Confidence 6789999999999875 66677788888 77887666
No 205
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=22.51 E-value=2.1e+02 Score=20.61 Aligned_cols=33 Identities=18% Similarity=0.286 Sum_probs=26.2
Q ss_pred eEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEec
Q 046033 243 VVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRF 279 (434)
Q Consensus 243 vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~ 279 (434)
-|||-|.| +++.+.+|...++..|++++.....
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysd 35 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSD 35 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecC
Confidence 46776654 6899999999999999998877653
No 206
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=22.48 E-value=2.4e+02 Score=20.92 Aligned_cols=47 Identities=11% Similarity=0.030 Sum_probs=30.7
Q ss_pred hCCcEEeccCCCChhhHHHHHHhhc-eeeeecccccCCcccHHHHHHHHHHHhc
Q 046033 341 YGVPIIAVPMVLDQLFNAKMVADIG-VGLEVPRDEINQRVRKEELARVFKQVVE 393 (434)
Q Consensus 341 ~GvP~v~~P~~~dq~~na~~~~~~G-~g~~~~~~~~~~~~~~~~l~~~v~~ll~ 393 (434)
..+|+|++-...+ ......+.+.| +--.+. +.++.+++..+|+.+++
T Consensus 75 ~~~~ii~~s~~~~-~~~~~~~~~~g~~~~~l~-----KP~~~~~L~~~i~~~l~ 122 (151)
T 3kcn_A 75 PNSVYLMLTGNQD-LTTAMEAVNEGQVFRFLN-----KPCQMSDIKAAINAGIK 122 (151)
T ss_dssp SSCEEEEEECGGG-HHHHHHHHHHTCCSEEEE-----SSCCHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCC-HHHHHHHHHcCCeeEEEc-----CCCCHHHHHHHHHHHHH
Confidence 4677777744433 33444555566 533343 34799999999999998
No 207
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=22.23 E-value=1.7e+02 Score=21.86 Aligned_cols=38 Identities=21% Similarity=0.293 Sum_probs=24.1
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHH-----cCCcEEEEecch
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQ-----HDIAAVAFVTIA 128 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~-----~giP~v~~~~~~ 128 (434)
+.++..+||+||.|.... .+..+.+. -++|++.++...
T Consensus 45 ~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 45 RLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 455667899999994432 33333333 268888887654
No 208
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=22.19 E-value=66 Score=29.76 Aligned_cols=29 Identities=24% Similarity=0.399 Sum_probs=20.7
Q ss_pred CcceEEeccCcchHHHH-----HHhCCcEEeccCC
Q 046033 322 SIGGFISHCGWGSTVEG-----IMYGVPIIAVPMV 351 (434)
Q Consensus 322 ~~~~~I~hgG~~s~~ea-----l~~GvP~v~~P~~ 351 (434)
.++++|-=|| ||+.++ ...|+|.|.+|..
T Consensus 106 ~~d~IIavGG-Gs~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 106 GSDILVGVGG-GKTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp TCSEEEEESS-HHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCEEEEeCC-cHHHHHHHHHHHhcCCCEEEecCc
Confidence 4566888877 444443 5679999999975
No 209
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.04 E-value=51 Score=25.09 Aligned_cols=47 Identities=9% Similarity=0.084 Sum_probs=31.2
Q ss_pred hCCcEEeccCCCChhhHHHHHHhhc-eeeeecccccCCcccHHHHHHHHHHHhc
Q 046033 341 YGVPIIAVPMVLDQLFNAKMVADIG-VGLEVPRDEINQRVRKEELARVFKQVVE 393 (434)
Q Consensus 341 ~GvP~v~~P~~~dq~~na~~~~~~G-~g~~~~~~~~~~~~~~~~l~~~v~~ll~ 393 (434)
..+|+|++-...+ ......+.+.| +--.+. +.++.++|..+|+.++.
T Consensus 78 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~~l~-----kP~~~~~L~~~i~~~~~ 125 (154)
T 2rjn_A 78 PDIERVVISGYAD-AQATIDAVNRGKISRFLL-----KPWEDEDVFKVVEKGLQ 125 (154)
T ss_dssp TTSEEEEEECGGG-HHHHHHHHHTTCCSEEEE-----SSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCC-HHHHHHHHhccchheeee-----CCCCHHHHHHHHHHHHH
Confidence 3688888754443 34444555555 544443 34789999999999998
No 210
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.99 E-value=47 Score=27.89 Aligned_cols=19 Identities=16% Similarity=0.294 Sum_probs=16.3
Q ss_pred HHHHHHHHhCCCEEEEEeC
Q 046033 8 LALAKKLSQQNFHIYFCST 26 (434)
Q Consensus 8 l~lA~~L~~~Gh~V~~~~~ 26 (434)
+.+|..|+++|++|+++=.
T Consensus 15 L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp HHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHCCCCEEEEEC
Confidence 5679999999999999853
No 211
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=21.94 E-value=1.5e+02 Score=24.85 Aligned_cols=40 Identities=23% Similarity=0.321 Sum_probs=26.0
Q ss_pred HHHHHHhhc--CCCEEEEcCCC-------chHHHHHHHcCCcEEEEecc
Q 046033 88 AFCNVLETL--KPTLVIYDLFQ-------PWAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 88 ~~~~~l~~~--~pDlVi~d~~~-------~~~~~~A~~~giP~v~~~~~ 127 (434)
.+.++++.. +||+|++|-.. -.|..+.-.+++|+|-+.-.
T Consensus 92 ~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 92 LFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp HHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 344555544 69999999332 23455666678999976533
No 212
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=21.88 E-value=75 Score=28.29 Aligned_cols=33 Identities=9% Similarity=0.131 Sum_probs=25.1
Q ss_pred HHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEE
Q 046033 9 ALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLID 49 (434)
Q Consensus 9 ~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~ 49 (434)
.+|..|.+.||+|+++.... .+.+.+ .|+....
T Consensus 16 ~~a~~L~~~g~~V~~~~r~~-~~~i~~-------~Gl~~~~ 48 (320)
T 3i83_A 16 FYGALLAKTGHCVSVVSRSD-YETVKA-------KGIRIRS 48 (320)
T ss_dssp HHHHHHHHTTCEEEEECSTT-HHHHHH-------HCEEEEE
T ss_pred HHHHHHHhCCCeEEEEeCCh-HHHHHh-------CCcEEee
Confidence 57889999999999999876 466666 5666543
No 213
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=21.77 E-value=2.5e+02 Score=22.41 Aligned_cols=49 Identities=16% Similarity=0.294 Sum_probs=34.4
Q ss_pred HHHHHHHHHHhHHHHHHHHhhcCCCEEEEc-CCCchHHHHHHHcCCcEEE
Q 046033 75 IPTLIEAFDAAKPAFCNVLETLKPTLVIYD-LFQPWAAEAAYQHDIAAVA 123 (434)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~pDlVi~d-~~~~~~~~~A~~~giP~v~ 123 (434)
+..+...-........+.+.+.++++||+. .....+...-.+.||.++.
T Consensus 56 ~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~gI~~vr 105 (178)
T 1gml_A 56 FTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIR 105 (178)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcEEEECCcccHHHHHHHHHCCCEEEe
Confidence 344444444445566667778899999999 5556777777788998884
No 214
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=21.71 E-value=2.9e+02 Score=25.41 Aligned_cols=34 Identities=15% Similarity=0.070 Sum_probs=24.0
Q ss_pred HHHHHHhhcCCCEEEEc--CCCchHHHHHHHcCCcE
Q 046033 88 AFCNVLETLKPTLVIYD--LFQPWAAEAAYQHDIAA 121 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d--~~~~~~~~~A~~~giP~ 121 (434)
.+.++.++.++|.|++- .....++.+++.+|+|.
T Consensus 66 ~~~~~~~~~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 66 VVRQTFVEFPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHSCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHhhhhcCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 34566677889999853 33345667888999994
No 215
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=21.71 E-value=1e+02 Score=27.77 Aligned_cols=72 Identities=18% Similarity=0.157 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEEecccCHHHHhcccCcceEEeccCcch
Q 046033 255 SKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVVQGWAPQAKILGHGSIGGFISHCGWGS 334 (434)
Q Consensus 255 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~~~~~p~~~il~~~~~~~~I~hgG~~s 334 (434)
+.+....+.+++.+...+.||.+.++.+. .+ +.++++...+-+++.. +|-..-...
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~----~r------------------lL~~lD~~~i~~~PK~--~~GySDiTa 119 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMNS----NS------------------LLPYIDYDAFQNNPKI--MIGYSDATA 119 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG----GG------------------GGGGSCHHHHHHSCCE--EEECGGGHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH----HH------------------HhhhcChhHHhhCCeE--EEEechHHH
Confidence 45778889999999889999998865432 11 2244444444444444 665555555
Q ss_pred HHHHHH--hCCcEEeccC
Q 046033 335 TVEGIM--YGVPIIAVPM 350 (434)
Q Consensus 335 ~~eal~--~GvP~v~~P~ 350 (434)
+.-+++ .|++.+--|.
T Consensus 120 L~~al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 120 LLLGIYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHHHHHCCCEEECCC
T ss_pred HHHHHHHhcCceEEECCh
Confidence 555655 3666655554
No 216
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=21.56 E-value=1.1e+02 Score=27.96 Aligned_cols=35 Identities=11% Similarity=0.118 Sum_probs=22.6
Q ss_pred ceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEe
Q 046033 242 SVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVR 278 (434)
Q Consensus 242 ~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~ 278 (434)
++++++.|+.+.. ..+..+.++|.+.|.++.+.+.
T Consensus 22 rIl~~~~~~~GHv--~p~l~La~~L~~~Gh~V~v~~~ 56 (415)
T 3rsc_A 22 HLLIVNVASHGLI--LPTLTVVTELVRRGHRVSYVTA 56 (415)
T ss_dssp EEEEECCSCHHHH--GGGHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeCCCcccc--ccHHHHHHHHHHCCCEEEEEeC
Confidence 4778777754421 2244577788888888877764
No 217
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=21.42 E-value=1.1e+02 Score=17.01 Aligned_cols=28 Identities=7% Similarity=0.364 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHHHH
Q 046033 382 EELARVFKQVVEQEEGQQIKRKAKELSESI 411 (434)
Q Consensus 382 ~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~ 411 (434)
.++.++|.++|.. +..+.....++++.+
T Consensus 4 nQLEdKvEeLl~~--~~~L~~EV~RLk~lL 31 (34)
T 2bni_A 4 KQIEDKLEEILSK--GHHICNELARIKKLL 31 (34)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHc--cHHHHHHHHHHHHHh
Confidence 3677888888874 456677777776654
No 218
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=21.39 E-value=2.1e+02 Score=25.77 Aligned_cols=26 Identities=27% Similarity=0.192 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHH--hCCCEEEEEeCCCc
Q 046033 4 ITPYLALAKKLS--QQNFHIYFCSTPIN 29 (434)
Q Consensus 4 ~~p~l~lA~~L~--~~Gh~V~~~~~~~~ 29 (434)
..-...+|..|+ ++|++|.++..+..
T Consensus 32 Tt~a~~lA~~la~~~~g~~vllid~D~~ 59 (348)
T 3io3_A 32 TTTSSSVAVQLALAQPNEQFLLISTDPA 59 (348)
T ss_dssp HHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 345678899999 89999999998743
No 219
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=21.23 E-value=1e+02 Score=29.55 Aligned_cols=44 Identities=20% Similarity=0.385 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCchhhhhhhhcccCCCCeEEEEecCCCCCCCCCCC
Q 046033 7 YLALAKKLSQQNFHIYFCSTPINLQSMSQNLQEKFSTSIQLIDLQLPCTFPELHDP 62 (434)
Q Consensus 7 ~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~~~~~~~~g~~f~~~~~~~~~~~~~~~ 62 (434)
++.+|+.|.+.|+++. ++....+.+++ .|+....+. .+.|+|+-
T Consensus 37 lv~~Ak~L~~lGfeI~--ATgGTak~L~e-------~GI~v~~V~---kvTgfPEi 80 (534)
T 4ehi_A 37 IVEFGKELENLGFEIL--STGGTFKLLKE-------NGIKVIEVS---DFTKSPEL 80 (534)
T ss_dssp HHHHHHHHHHTTCEEE--ECHHHHHHHHH-------TTCCCEECB---CCC-----
T ss_pred HHHHHHHHHHCCCEEE--EccHHHHHHHH-------CCCceeehh---hccCCchh
Confidence 6789999999999875 67677888888 778876662 33455543
No 220
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=21.17 E-value=1.8e+02 Score=21.29 Aligned_cols=38 Identities=13% Similarity=0.194 Sum_probs=23.7
Q ss_pred HHHhh-cCCCEEEEcCCC---chHHHHHHH----cCCcEEEEecch
Q 046033 91 NVLET-LKPTLVIYDLFQ---PWAAEAAYQ----HDIAAVAFVTIA 128 (434)
Q Consensus 91 ~~l~~-~~pDlVi~d~~~---~~~~~~A~~----~giP~v~~~~~~ 128 (434)
+.++. ..||+||.|... ..+..+++. -++|+|.++...
T Consensus 43 ~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 88 (140)
T 3h5i_A 43 EKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHT 88 (140)
T ss_dssp HHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSS
T ss_pred HHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCC
Confidence 44444 689999999543 234444333 468888877543
No 221
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=21.10 E-value=1.1e+02 Score=27.52 Aligned_cols=28 Identities=14% Similarity=0.033 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEEecCCC
Q 046033 255 SKEEMNELASGLLLSEVSFIWVVRFHSE 282 (434)
Q Consensus 255 ~~~~~~~i~~~l~~~~~~~i~~~~~~~~ 282 (434)
+.+....+.+++.+...+.||.+.++.+
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g 90 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFN 90 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchh
Confidence 3577888999999999999999876643
No 222
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=21.10 E-value=2.3e+02 Score=25.10 Aligned_cols=40 Identities=8% Similarity=0.037 Sum_probs=30.2
Q ss_pred HHHHHHHhhcCCCEEEEcCCCc--hHHHHHHHcCCcEEEEec
Q 046033 87 PAFCNVLETLKPTLVIYDLFQP--WAAEAAYQHDIAAVAFVT 126 (434)
Q Consensus 87 ~~~~~~l~~~~pDlVi~d~~~~--~~~~~A~~~giP~v~~~~ 126 (434)
.++.+.+++.+..+|+++.... .+-.+|+..|++++.+.+
T Consensus 229 ~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~ 270 (312)
T 2o1e_A 229 AKLKTYAKEHNVKVIYFEEIASSKVADTLASEIGAKTEVLNT 270 (312)
T ss_dssp HHHHHHTTSSCCCEEECSSCCCHHHHHHHHHHTCCEEECCCC
T ss_pred HHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCcEEEecc
Confidence 3556788889999999994443 356789999999886543
No 223
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=21.01 E-value=1.5e+02 Score=21.94 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=23.3
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHHc-----CCcEEEEecc
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQH-----DIAAVAFVTI 127 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~~-----giP~v~~~~~ 127 (434)
+.++..+||+||.|...+ .+..+++.+ ++|++.++..
T Consensus 43 ~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~ 86 (141)
T 3cu5_A 43 QIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGY 86 (141)
T ss_dssp HHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCS
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCC
Confidence 455667899999995433 344444332 5788877654
No 224
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=21.00 E-value=1.3e+02 Score=27.66 Aligned_cols=44 Identities=14% Similarity=-0.046 Sum_probs=25.0
Q ss_pred hhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEE
Q 046033 230 KIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIW 275 (434)
Q Consensus 230 ~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~ 275 (434)
++.+++...+.++++.|+-++... ......+.+.|++.+..+.+
T Consensus 21 ~l~~~~~~~g~~~~liVtd~~~~~--~g~~~~v~~~L~~~gi~~~~ 64 (383)
T 3ox4_A 21 KAIKDLNGSGFKNALIVSDAFMNK--SGVVKQVADLLKAQGINSAV 64 (383)
T ss_dssp HHHHTTTTSCCCEEEEEEEHHHHH--TTHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHcCCCEEEEEECCchhh--CchHHHHHHHHHHcCCeEEE
Confidence 444555554435576676544221 12567778888887766543
No 225
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=20.86 E-value=1.6e+02 Score=20.31 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=22.7
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHH-------cCCcEEEEecch
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQ-------HDIAAVAFVTIA 128 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~-------~giP~v~~~~~~ 128 (434)
+.++..+||+||.|.... .+..+.+. .++|++.++...
T Consensus 39 ~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~ 85 (119)
T 2j48_A 39 DQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEP 85 (119)
T ss_dssp HHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSC
T ss_pred HHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCC
Confidence 455566899999994432 23332222 357888776543
No 226
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=20.82 E-value=1.1e+02 Score=22.57 Aligned_cols=40 Identities=13% Similarity=0.208 Sum_probs=22.7
Q ss_pred HHHHHhhcCCCEEEEcCCCch--HHHHHHH-------cCCcEEEEecch
Q 046033 89 FCNVLETLKPTLVIYDLFQPW--AAEAAYQ-------HDIAAVAFVTIA 128 (434)
Q Consensus 89 ~~~~l~~~~pDlVi~d~~~~~--~~~~A~~-------~giP~v~~~~~~ 128 (434)
..+.++..+||+||.|..... +..+.+. -++|++.++...
T Consensus 38 a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 86 (140)
T 3n53_A 38 ALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSE 86 (140)
T ss_dssp HHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC-
T ss_pred HHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCC
Confidence 335566678999999954331 2222221 468888877654
No 227
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=20.80 E-value=2.5e+02 Score=27.42 Aligned_cols=82 Identities=15% Similarity=0.121 Sum_probs=51.9
Q ss_pred HHHHHhCCcEEeccCCCChhhHHHHHHhhceeeeecccccCCcccHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhcc
Q 046033 336 VEGIMYGVPIIAVPMVLDQLFNAKMVADIGVGLEVPRDEINQRVRKEELARVFKQVVEQEEGQQIKRKAKELSESIKKKG 415 (434)
Q Consensus 336 ~eal~~GvP~v~~P~~~dq~~na~~~~~~G~g~~~~~~~~~~~~~~~~l~~~v~~ll~~~~~~~~~~~a~~l~~~~~~~~ 415 (434)
..|-.+|+|+-++....-.+..+..+..+|+-... +++..+.. ++..+. .-. .+.++++++.+.+..
T Consensus 490 ~aa~~~g~~vgvCGe~agdp~~~~~l~~lG~~~~S--------~~p~~v~~-~~~~~~---~~~-~~~~~~la~~~l~~~ 556 (575)
T 2hwg_A 490 DASHAEGKWTGMCGELAGDERATLLLLGMGLDEFS--------MSAISIPR-IKKIIR---NTN-FEDAKVLAEQALAQP 556 (575)
T ss_dssp HHHHHTTCEEEECSTTTTCTTTHHHHHHTTCCEEE--------ECGGGHHH-HHHHHH---TSC-HHHHHHHHHHHHHCS
T ss_pred HHHHHhCCeEEEeCCCCCCHHHHHHHHHCCCCEEE--------ECccHHHH-HHHHHH---hcC-HHHHHHHHHHHHcCC
Confidence 34447899998887665556777777777765422 35554422 333333 111 456788888888777
Q ss_pred -hHHHHHHHHHHHhhh
Q 046033 416 -DDEEINVVEKLLQLV 430 (434)
Q Consensus 416 -~~~~~~~ve~l~~~~ 430 (434)
..++..+++.+....
T Consensus 557 ~~~~v~~~~~~~~~~~ 572 (575)
T 2hwg_A 557 TTDELMTLVNKFIEEK 572 (575)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhc
Confidence 778888887765543
No 228
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=20.73 E-value=3.9e+02 Score=23.60 Aligned_cols=41 Identities=2% Similarity=0.005 Sum_probs=25.3
Q ss_pred HHHHHHhhcCCCEEEEcCC-CchHHHHHHHcCCcEEEEecch
Q 046033 88 AFCNVLETLKPTLVIYDLF-QPWAAEAAYQHDIAAVAFVTIA 128 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~-~~~~~~~A~~~giP~v~~~~~~ 128 (434)
++.+.+++.+||++|+-.+ ......+-......++.+.+..
T Consensus 72 ~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 72 ENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp HHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred HHHHHHHhcCCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 4557788899999987633 2333333444455667666554
No 229
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=20.69 E-value=1.2e+02 Score=22.04 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=22.6
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHHc-----CCcEEEEecch
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQH-----DIAAVAFVTIA 128 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~~-----giP~v~~~~~~ 128 (434)
+.++..+||+||.|...+ .+..+.+.+ ++|++.++...
T Consensus 40 ~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 84 (134)
T 3f6c_A 40 QRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKN 84 (134)
T ss_dssp HHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC-
T ss_pred HHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCC
Confidence 344556899999994432 344444332 57887776544
No 230
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=20.66 E-value=1.1e+02 Score=25.34 Aligned_cols=32 Identities=25% Similarity=0.269 Sum_probs=24.2
Q ss_pred CCCEEE-EcC-CCchHHHHHHHcCCcEEEEecch
Q 046033 97 KPTLVI-YDL-FQPWAAEAAYQHDIAAVAFVTIA 128 (434)
Q Consensus 97 ~pDlVi-~d~-~~~~~~~~A~~~giP~v~~~~~~ 128 (434)
.||+|| .|. ....++.=|.++|||+|.+.-+.
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 148 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSN 148 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCCC
Confidence 599876 554 44567888999999999987543
No 231
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=20.62 E-value=3.6e+02 Score=22.39 Aligned_cols=100 Identities=11% Similarity=0.020 Sum_probs=51.3
Q ss_pred hhhhhhhcCCCCCceEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEecCCCCCccccccCchhHHHhhcCCCCcEEE
Q 046033 229 TKIMDWLSRKEPSSVVYVSFGSEYFLSKEEMNELASGLLLSEVSFIWVVRFHSEGNFTIEEALPQGFAEEIQGNNKGMVV 308 (434)
Q Consensus 229 ~~~~~~l~~~~~~~vV~vs~Gs~~~~~~~~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~~ 308 (434)
.++-++|... ....|+.|.. .......++..+.+.+++-+...-..+ ..+.. --+....
T Consensus 59 ~~lg~~La~~---g~~lVsGGg~-----GiM~aa~~gAl~~gG~~iGV~~~~P~~------~~~~~-------~~t~~~~ 117 (217)
T 1wek_A 59 YRLGRALAEA---GFGVVTGGGP-----GVMEAVNRGAYEAGGVSVGLNIELPHE------QKPNP-------YQTHALS 117 (217)
T ss_dssp HHHHHHHHHH---TCEEEECSCS-----HHHHHHHHHHHHTTCCEEEEEECCTTC------CCCCS-------CCSEEEE
T ss_pred HHHHHHHHHC---CCEEEeCChh-----hHHHHHHHHHHHcCCCEEEEeeCCcch------hhccc-------cCCcCcc
Confidence 4455556553 2677777653 345555566555665665553211000 01110 1111233
Q ss_pred ecccCHH-HHhcccCcceEEeccCcchHHHHHH----------hCCcEEecc
Q 046033 309 QGWAPQA-KILGHGSIGGFISHCGWGSTVEGIM----------YGVPIIAVP 349 (434)
Q Consensus 309 ~~~~p~~-~il~~~~~~~~I~hgG~~s~~eal~----------~GvP~v~~P 349 (434)
+...+.. .++...+-..++--||.||+-|... +++|++++.
T Consensus 118 ~~~f~~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~ 169 (217)
T 1wek_A 118 LRYFFVRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLD 169 (217)
T ss_dssp ESCHHHHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEEC
T ss_pred cCCHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeC
Confidence 3444443 3343222245667899999877633 479999885
No 232
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=20.57 E-value=3.3e+02 Score=24.10 Aligned_cols=41 Identities=7% Similarity=0.028 Sum_probs=24.3
Q ss_pred HHHHHHhhcCCCEEEEcCC-CchHHHHHHHcCCcEEEEecch
Q 046033 88 AFCNVLETLKPTLVIYDLF-QPWAAEAAYQHDIAAVAFVTIA 128 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~-~~~~~~~A~~~giP~v~~~~~~ 128 (434)
++.+.+++.+||++|+-.+ ......+-......++.+.+..
T Consensus 71 ~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSl 112 (314)
T 3tqq_A 71 VEQEKLIAMNADVMVVVAYGLILPKKALNAFRLGCVNVHASL 112 (314)
T ss_dssp HHHHHHHTTCCSEEEEESCCSCCCHHHHTSSTTCEEEEESSC
T ss_pred HHHHHHHhcCCCEEEEcCcccccCHHHHhhCcCCEEEecCcc
Confidence 3557888999999987633 2333333333344466666554
No 233
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=20.54 E-value=1.2e+02 Score=25.91 Aligned_cols=41 Identities=17% Similarity=0.131 Sum_probs=32.1
Q ss_pred hHHHHHHHHhhcCCCEEEEcCCCchHHHHHHHcCCcEEEEe
Q 046033 85 AKPAFCNVLETLKPTLVIYDLFQPWAAEAAYQHDIAAVAFV 125 (434)
Q Consensus 85 ~~~~~~~~l~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~ 125 (434)
+...+.+.++...|++++.-.-......+|+..|+|++.-.
T Consensus 119 ~A~av~~av~~~d~~L~l~~l~gs~~~~~A~~~Gl~~~~E~ 159 (252)
T 1xw8_A 119 LADAIARAVYACDPALILVGLAGSELIRAGKQYGLTTREEV 159 (252)
T ss_dssp HHHHHHHHHHHHCTTCEEEEETTSHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHhCCCcEEEecCChHHHHHHHHcCCcEEEEE
Confidence 35666777888899998877555667899999999999643
No 234
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=20.51 E-value=1.9e+02 Score=23.43 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=25.9
Q ss_pred HHHhhcCCCEEEEcCCCc--hHHHHHHH-----cCCcEEEEecchHH
Q 046033 91 NVLETLKPTLVIYDLFQP--WAAEAAYQ-----HDIAAVAFVTIAAA 130 (434)
Q Consensus 91 ~~l~~~~pDlVi~d~~~~--~~~~~A~~-----~giP~v~~~~~~~~ 130 (434)
+.++..+||+||.|...+ .+..+.+. -++|++.++.....
T Consensus 40 ~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~ 86 (225)
T 1kgs_A 40 YMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDV 86 (225)
T ss_dssp HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCHH
T ss_pred HHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCCH
Confidence 455667899999995433 34433333 26899988766543
No 235
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=20.40 E-value=1.6e+02 Score=23.34 Aligned_cols=40 Identities=3% Similarity=-0.027 Sum_probs=28.5
Q ss_pred HHHHHHHHhhcCCCEEEEcCCCc---hHHHHHHHcCCcEEEEecc
Q 046033 86 KPAFCNVLETLKPTLVIYDLFQP---WAAEAAYQHDIAAVAFVTI 127 (434)
Q Consensus 86 ~~~~~~~l~~~~pDlVi~d~~~~---~~~~~A~~~giP~v~~~~~ 127 (434)
.+.+.++++ +||+|++-.... .+..+|.++|+|++.-...
T Consensus 60 a~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~sdv~~ 102 (166)
T 3fet_A 60 SEGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTATEIFS 102 (166)
T ss_dssp HHHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEEEEEE
T ss_pred HHHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCceeeEEE
Confidence 344555666 899999884332 3468889999999986654
No 236
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=20.40 E-value=1.3e+02 Score=21.93 Aligned_cols=38 Identities=11% Similarity=-0.115 Sum_probs=24.7
Q ss_pred HHHHHHhh-cCCCEEEEcCCCc--hHHHHHHHc-----CCcEEEEe
Q 046033 88 AFCNVLET-LKPTLVIYDLFQP--WAAEAAYQH-----DIAAVAFV 125 (434)
Q Consensus 88 ~~~~~l~~-~~pDlVi~d~~~~--~~~~~A~~~-----giP~v~~~ 125 (434)
+..+.++. .+||+||.|.... .+..+.+.+ ++|++.++
T Consensus 50 ~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 50 AFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp HHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 34456667 7899999995433 344444443 57888776
No 237
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=20.25 E-value=41 Score=25.63 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=27.7
Q ss_pred CChHHHHHHHHHHHhCCCEEEEEeCCCchhhhhh
Q 046033 2 GHITPYLALAKKLSQQNFHIYFCSTPINLQSMSQ 35 (434)
Q Consensus 2 GH~~p~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~ 35 (434)
||.++.-.+-+.|.++|.+..+++.+.+...+..
T Consensus 1 ~~m~Rl~~l~~~m~~~glDa~li~~~~ni~YlTG 34 (140)
T 3i7m_A 1 GHMTKLEQIQQWTAQHHASMTYLSNPKTIEYLTG 34 (140)
T ss_dssp ---CHHHHHHHHHHHTTCSEEEECCHHHHHHHHC
T ss_pred CcchHHHHHHHHHHHcCCCEEEECCCCcceeecC
Confidence 7889999999999999999999999877777766
No 238
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=20.19 E-value=1.6e+02 Score=27.84 Aligned_cols=39 Identities=13% Similarity=0.104 Sum_probs=28.2
Q ss_pred hHHHHHHHHhhcCCCEEEEcC--CCchHHHHHHHcCCcEEE
Q 046033 85 AKPAFCNVLETLKPTLVIYDL--FQPWAAEAAYQHDIAAVA 123 (434)
Q Consensus 85 ~~~~~~~~l~~~~pDlVi~d~--~~~~~~~~A~~~giP~v~ 123 (434)
+.+.+.+.+++.++|+|++=. -.+.+..+|..+|+|++.
T Consensus 304 l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~p~~~ 344 (453)
T 3qw4_B 304 VAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIY 344 (453)
T ss_dssp HHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhCCCEEE
Confidence 344555666667899999762 225678899999999874
No 239
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=20.15 E-value=45 Score=27.43 Aligned_cols=29 Identities=7% Similarity=-0.144 Sum_probs=25.2
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCchhhhhh
Q 046033 7 YLALAKKLSQQNFHIYFCSTPINLQSMSQ 35 (434)
Q Consensus 7 ~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~ 35 (434)
...+.+.|+++|++|+++.++...+++..
T Consensus 24 ~~~l~~~L~~~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 24 ISSYLLYFKSFFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp THHHHHHHTTTSSEEEEEECHHHHHHSCH
T ss_pred HHHHHHHHHHCCCEEEEEEchhHHHHHHH
Confidence 56789999999999999999988877765
No 240
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=20.14 E-value=2.1e+02 Score=25.64 Aligned_cols=41 Identities=10% Similarity=0.049 Sum_probs=24.8
Q ss_pred HHHHHHhhcCCCEEEEcCC-CchHHHHHHHcCCcEEEEecch
Q 046033 88 AFCNVLETLKPTLVIYDLF-QPWAAEAAYQHDIAAVAFVTIA 128 (434)
Q Consensus 88 ~~~~~l~~~~pDlVi~d~~-~~~~~~~A~~~giP~v~~~~~~ 128 (434)
++.+.+++.+||++|+-.+ ......+-......++.+.+..
T Consensus 90 ~~~~~l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 90 DVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp HHHHHHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred HHHHHHHhcCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 4557788899999987743 2233333344445566665554
Done!