BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046034
(64 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49627|ISU1_ARATH Iron-sulfur cluster assembly protein 1 OS=Arabidopsis thaliana
GN=ISU1 PE=2 SV=1
Length = 167
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 40/49 (81%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKHTKSSAASEAAPAEKA 61
EIAKHLSLPPVKLHCSMLAEDAIKAAVKDY+ K K++ A+ A +A
Sbjct: 119 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYKEKRVKTNGAAAAGETTQA 167
>sp|Q9MAB6|ISU2_ARATH Iron-sulfur cluster assembly protein 2 OS=Arabidopsis thaliana
GN=ISU2 PE=2 SV=1
Length = 163
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKHTKSSAAS 53
EIAKHL LPPVKLHCSMLAEDAIK+AV+DY+ K K++AA+
Sbjct: 116 EIAKHLRLPPVKLHCSMLAEDAIKSAVRDYKEKQAKTNAAA 156
>sp|Q6CRQ9|ISU1_KLULA Iron sulfur cluster assembly protein 1, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ISU1 PE=3
SV=1
Length = 180
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 32/34 (94%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
EIA+ LSLPPVKLHCSMLAEDAIKAA+KDY+AK
Sbjct: 141 EIARELSLPPVKLHCSMLAEDAIKAAIKDYQAKR 174
>sp|O81433|ISU3_ARATH Iron-sulfur cluster assembly protein 3 OS=Arabidopsis thaliana
GN=ISU3 PE=2 SV=1
Length = 171
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 36/41 (87%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKHTKSSAAS 53
+IAKHLSLPPVKLHCSMLAEDAIKAA+K+Y+ K K++ +
Sbjct: 117 QIAKHLSLPPVKLHCSMLAEDAIKAAIKNYKEKQDKANGET 157
>sp|Q6BGU0|ISU1_DEBHA Iron sulfur cluster assembly protein 1, mitochondrial
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=ISU1 PE=3 SV=1
Length = 179
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 14 IAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKHT--KSSAASEAAPAEKAA 62
IAK LSLPPVKLHCSMLAEDAIK+AVKDY +K + + + EAA AE A
Sbjct: 128 IAKELSLPPVKLHCSMLAEDAIKSAVKDYRSKRSVKQPTLGPEAAQAETIA 178
>sp|Q03020|ISU1_YEAST Iron sulfur cluster assembly protein 1, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ISU1 PE=1 SV=1
Length = 165
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 34/41 (82%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKHTKSSAAS 53
EIAK LSLPPVKLHCSMLAEDAIKAA+KDY++K + S
Sbjct: 125 EIAKELSLPPVKLHCSMLAEDAIKAAIKDYKSKRNTPTMLS 165
>sp|Q75C07|ISU1_ASHGO Iron sulfur cluster assembly protein 1, mitochondrial OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=ISU1 PE=3 SV=1
Length = 154
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 31/34 (91%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
EIA+ LSLPPVKLHCSMLAEDAIKAA+KDY +K
Sbjct: 115 EIARELSLPPVKLHCSMLAEDAIKAAIKDYRSKR 148
>sp|Q12056|ISU2_YEAST Iron sulfur cluster assembly protein 2, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ISU2 PE=1 SV=1
Length = 156
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 32/37 (86%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKHTKS 49
EIAK LSLPPVKLHCSMLAEDAIKAA+KDY+ K S
Sbjct: 117 EIAKELSLPPVKLHCSMLAEDAIKAAIKDYKTKRNPS 153
>sp|B0YLW7|ISU1_TRAHO Iron sulfur cluster assembly protein 1 OS=Trachipleistophora
hominis GN=ISU1 PE=3 SV=1
Length = 138
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 11 SKEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
+K+IAK LSLPPVKLHCSMLAEDAIKAA+ DY+ K+
Sbjct: 101 NKDIAKKLSLPPVKLHCSMLAEDAIKAAISDYQKKN 136
>sp|Q6FJY3|ISU1_CANGA Iron sulfur cluster assembly protein 1, mitochondrial OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=ISU1 PE=3 SV=1
Length = 213
Score = 62.0 bits (149), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 14 IAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKHTKSS 50
IAK LSLPPVKLHCSMLAEDAIKAA+KDY++K T ++
Sbjct: 174 IAKELSLPPVKLHCSMLAEDAIKAAIKDYKSKRTSTT 210
>sp|Q6CFQ0|ISU1_YARLI Iron sulfur cluster assembly protein 1, mitochondrial OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=ISU1 PE=3 SV=1
Length = 181
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/33 (78%), Positives = 29/33 (87%)
Query: 14 IAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
IAK LSLPPVKLHCSMLAEDAIK+A+ DY +K
Sbjct: 127 IAKELSLPPVKLHCSMLAEDAIKSAISDYNSKR 159
>sp|Q9ZD61|NIFU_RICPR NifU-like protein OS=Rickettsia prowazekii (strain Madrid E)
GN=nifU PE=3 SV=1
Length = 131
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
EIAK LSLPPVKLHCS+LAEDAIKAA+ DY+ K
Sbjct: 92 EIAKELSLPPVKLHCSLLAEDAIKAAIADYKQKR 125
>sp|Q8SSM2|ISU1_ENCCU Iron sulfur cluster assembly protein 1 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ISU1 PE=3 SV=1
Length = 140
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 33/39 (84%)
Query: 11 SKEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKHTKS 49
+++IAK LSLPP+KLHCSMLAEDAIK A+KD+ K+ S
Sbjct: 101 NRDIAKKLSLPPIKLHCSMLAEDAIKMAIKDFLDKNKPS 139
>sp|Q9UTC6|ISU1_SCHPO Iron sulfur cluster assembly protein 1, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=isu1 PE=1 SV=1
Length = 192
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
+IAK L LPPVKLHCSMLAEDAIK+AVK Y +K
Sbjct: 143 QIAKELCLPPVKLHCSMLAEDAIKSAVKHYRSKQ 176
>sp|Q9H1K1|ISCU_HUMAN Iron-sulfur cluster assembly enzyme ISCU, mitochondrial OS=Homo
sapiens GN=ISCU PE=1 SV=2
Length = 167
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
+IAK L LPPVKLHCSMLAEDAIKAA+ DY+ K
Sbjct: 124 DIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQ 157
>sp|Q9D7P6|ISCU_MOUSE Iron-sulfur cluster assembly enzyme ISCU, mitochondrial OS=Mus
musculus GN=Iscu PE=1 SV=1
Length = 168
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
+IAK L LPPVKLHCSMLAEDAIKAA+ DY+ K
Sbjct: 125 DIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQ 158
>sp|Q57074|NIFU_HAEIN NifU-like protein OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=nifU PE=1 SV=2
Length = 126
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 30/34 (88%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
+IA+ L LPPVK+HCS+LAEDAIKAA+ DY+AK
Sbjct: 92 QIAEELELPPVKVHCSILAEDAIKAAIADYKAKQ 125
>sp|O51885|NIFU_BUCAP NifU-like protein OS=Buchnera aphidicola subsp. Schizaphis graminum
(strain Sg) GN=nifU PE=3 SV=1
Length = 128
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 30/36 (83%)
Query: 14 IAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKHTKS 49
I + L LPPVK+HCS+LAEDAIKAA+ DY++K K+
Sbjct: 93 IVEELELPPVKIHCSILAEDAIKAAISDYKSKKNKN 128
>sp|P0ACD7|NIFU_SHIFL NifU-like protein OS=Shigella flexneri GN=nifU PE=3 SV=1
Length = 128
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
+IA+ L LPPVK+HCS+LAEDAIKAA+ DY++K
Sbjct: 92 DIAEELELPPVKIHCSILAEDAIKAAIADYKSKR 125
>sp|P0ACD4|NIFU_ECOLI NifU-like protein OS=Escherichia coli (strain K12) GN=nifU PE=1
SV=1
Length = 128
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
+IA+ L LPPVK+HCS+LAEDAIKAA+ DY++K
Sbjct: 92 DIAEELELPPVKIHCSILAEDAIKAAIADYKSKR 125
>sp|P0ACD5|NIFU_ECOL6 NifU-like protein OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=nifU PE=3 SV=1
Length = 128
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
+IA+ L LPPVK+HCS+LAEDAIKAA+ DY++K
Sbjct: 92 DIAEELELPPVKIHCSILAEDAIKAAIADYKSKR 125
>sp|P0ACD6|NIFU_ECO57 NifU-like protein OS=Escherichia coli O157:H7 GN=nifU PE=1 SV=1
Length = 128
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 13 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
+IA+ L LPPVK+HCS+LAEDAIKAA+ DY++K
Sbjct: 92 DIAEELELPPVKIHCSILAEDAIKAAIADYKSKR 125
>sp|Q89A18|NIFU_BUCBP NifU-like protein OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=nifU PE=3 SV=1
Length = 126
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%), Gaps = 5/44 (11%)
Query: 3 NLRNLSGLSKEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKH 46
N++N + IA+ L LPPVK+HCS+LAEDAIKAA+ DY+ K+
Sbjct: 87 NIKNTN-----IAEELDLPPVKIHCSILAEDAIKAAITDYKNKN 125
>sp|P57658|NIFU_BUCAI NifU-like protein OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=nifU PE=3 SV=1
Length = 127
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 14 IAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAK 45
I + L LPPVK+HCS+LAEDAIKAA+ DY+ K
Sbjct: 93 IVEELDLPPVKIHCSILAEDAIKAAISDYKRK 124
>sp|P05340|NIFU_AZOVI Nitrogen fixation protein NifU OS=Azotobacter vinelandii GN=nifU
PE=3 SV=2
Length = 312
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 11 SKEIAKHL-SLPPVKLHCSMLAEDAIKAAVKDYEAK 45
+++IA +L LPP K+HCS++ +A++AAV +Y +
Sbjct: 89 NQDIADYLDGLPPEKMHCSVMGREALQAAVANYRGE 124
>sp|O67045|NIFU_AQUAE NifU-like protein OS=Aquifex aeolicus (strain VF5) GN=nifU PE=1
SV=1
Length = 157
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 12 KEIAKHLS-LPPVKLHCSMLAEDAIKAAVKDYEAKHTKSSAAS 53
K+I + L LPP K+HC+ L + + A+KDY K + AS
Sbjct: 91 KDIFEELGGLPPQKIHCTNLGLETLHVAIKDYLMKQGRVEEAS 133
>sp|P20628|NIFU_NOSS1 Nitrogen fixation protein NifU OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=nifU PE=3 SV=1
Length = 300
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 11 SKEIAKHLS-LPPVKLHCSMLAEDAIKAAVKDYEA 44
+K+IA +L LP K+HCS++ ++A++AA+ +Y
Sbjct: 95 NKDIADYLGGLPEAKMHCSVMGQEALEAAIYNYRG 129
>sp|P05343|NIFU_KLEPN Nitrogen fixation protein NifU OS=Klebsiella pneumoniae GN=nifU
PE=3 SV=2
Length = 274
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 11 SKEIAKHLS-LPPVKLHCSMLAEDAIKAAVKDYEAK 45
+++IA +L LPP K+HCS++ ++A++AA+ ++ +
Sbjct: 89 NQQIADYLDGLPPEKMHCSVMGQEALRAAIANFRGE 124
>sp|Q43885|NIFU_TRIAZ Nitrogen fixation protein NifU OS=Trichormus azollae GN=nifU PE=3
SV=1
Length = 300
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 11 SKEIAKHLS-LPPVKLHCSMLAEDAIKAAVKDYEA 44
+K+IA +L LP K+HCS++ ++A++AA+ +Y
Sbjct: 95 NKDIADYLGGLPEAKMHCSVMGQEALEAAIYNYRG 129
>sp|P26247|NIFU_NOSCO Nitrogen fixation protein NifU (Fragment) OS=Nostoc commune
GN=nifU PE=3 SV=1
Length = 75
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 12 KEIAKHLS-LPPVKLHCSMLAEDAIKAAVKDYEA 44
K+IA +L LP K+HCS++ ++A++AA+ Y
Sbjct: 7 KDIADYLGGLPEAKMHCSVMGQEALEAAIYWYRG 40
>sp|Q00241|NIFU_PLEBO Nitrogen fixation protein NifU (Fragment) OS=Plectonema boryanum
GN=nifU PE=3 SV=1
Length = 205
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 11 SKEIAKHLS-LPPVKLHCSMLAEDAIKAAVKDYEAKHTKSSAASEAA 56
+++IA L LP K+HCS++ ++A++AA+ Y + E A
Sbjct: 6 NQDIAAFLGGLPEAKMHCSVMGQEALEAAIFKYRGIEVEHHEEDEGA 52
>sp|Q43909|NIFU_AZOBR Nitrogen fixation protein NifU OS=Azospirillum brasilense GN=nifU
PE=3 SV=2
Length = 310
Score = 29.3 bits (64), Expect = 8.6, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 11 SKEIAKHLS-LPPVKLHCSMLAEDAIKAAVKDYEAK 45
+++IA++L LPP K+ CS++ +A+ AA+ +++ +
Sbjct: 91 NRDIAEYLGGLPPEKMDCSVMGAEALPAAIANFKGE 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.118 0.310
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,827,046
Number of Sequences: 539616
Number of extensions: 469314
Number of successful extensions: 1684
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1641
Number of HSP's gapped (non-prelim): 45
length of query: 64
length of database: 191,569,459
effective HSP length: 36
effective length of query: 28
effective length of database: 172,143,283
effective search space: 4820011924
effective search space used: 4820011924
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)