Query 046036
Match_columns 614
No_of_seqs 707 out of 5272
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 14:00:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046036.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046036hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.8E-42 6E-47 393.0 20.1 309 2-318 358-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.3E-39 4.5E-44 369.4 20.5 307 1-309 308-722 (768)
3 3v47_A TOLL-like receptor 5B a 100.0 2E-36 6.7E-41 323.3 24.3 292 11-306 30-411 (455)
4 1ogq_A PGIP-2, polygalacturona 100.0 1.4E-37 4.9E-42 314.5 12.3 255 35-307 50-308 (313)
5 2id5_A Lingo-1, leucine rich r 100.0 3.2E-36 1.1E-40 323.5 21.2 298 2-305 25-335 (477)
6 3v47_A TOLL-like receptor 5B a 100.0 9.8E-36 3.4E-40 317.8 21.2 281 3-287 46-415 (455)
7 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-36 4.1E-41 307.8 11.4 253 11-282 50-307 (313)
8 4eco_A Uncharacterized protein 100.0 2E-35 6.8E-40 327.6 19.1 294 3-302 239-578 (636)
9 3vq2_A TLR4, TOLL-like recepto 100.0 8.4E-35 2.9E-39 322.2 23.9 179 125-304 352-559 (606)
10 4eco_A Uncharacterized protein 100.0 1.5E-35 5.1E-40 328.7 17.9 290 3-301 198-547 (636)
11 3t6q_A CD180 antigen; protein- 100.0 1.2E-34 4E-39 321.0 22.9 281 7-305 274-562 (606)
12 2z7x_B TOLL-like receptor 1, v 100.0 6.4E-35 2.2E-39 317.0 19.8 290 2-302 14-456 (520)
13 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.9E-34 6.5E-39 316.1 23.5 289 2-301 45-484 (562)
14 2id5_A Lingo-1, leucine rich r 100.0 4.3E-35 1.5E-39 314.7 17.8 301 4-308 49-361 (477)
15 4ecn_A Leucine-rich repeat pro 100.0 3.4E-34 1.1E-38 323.4 21.1 296 2-308 480-822 (876)
16 3t6q_A CD180 antigen; protein- 100.0 2E-33 7E-38 311.0 26.4 149 152-301 259-411 (606)
17 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-33 4.4E-38 316.9 24.5 301 4-305 239-624 (680)
18 3o6n_A APL1; leucine-rich repe 100.0 8.4E-34 2.9E-38 296.5 20.5 285 3-305 60-354 (390)
19 3vq2_A TLR4, TOLL-like recepto 100.0 1.8E-33 6.3E-38 311.4 23.3 294 4-302 49-509 (606)
20 4ecn_A Leucine-rich repeat pro 100.0 4E-34 1.4E-38 322.9 18.1 290 3-301 440-787 (876)
21 3oja_B Anopheles plasmodium-re 100.0 1E-33 3.6E-38 312.0 20.6 286 2-305 65-360 (597)
22 2z63_A TOLL-like receptor 4, v 100.0 2E-33 6.7E-38 308.8 22.4 165 140-305 366-533 (570)
23 1xku_A Decorin; proteoglycan, 100.0 1.1E-32 3.7E-37 281.3 24.7 272 11-308 31-311 (330)
24 4g8a_A TOLL-like receptor 4; l 100.0 1.2E-32 4.1E-37 306.4 25.5 138 168-305 442-582 (635)
25 2ft3_A Biglycan; proteoglycan, 100.0 2.2E-32 7.6E-37 279.1 25.1 280 2-308 18-312 (332)
26 3j0a_A TOLL-like receptor 5; m 100.0 1.5E-32 5E-37 314.8 25.4 294 2-302 18-374 (844)
27 2ft3_A Biglycan; proteoglycan, 100.0 1.6E-32 5.4E-37 280.2 22.7 274 2-301 47-331 (332)
28 2z81_A CD282 antigen, TOLL-lik 100.0 3.4E-33 1.2E-37 305.5 17.8 111 4-118 43-155 (549)
29 3j0a_A TOLL-like receptor 5; m 100.0 1.6E-32 5.5E-37 314.4 23.3 292 3-302 40-393 (844)
30 1xku_A Decorin; proteoglycan, 100.0 7.9E-32 2.7E-36 274.9 25.5 274 2-300 45-329 (330)
31 1ziw_A TOLL-like receptor 3; i 100.0 3.7E-32 1.3E-36 305.1 23.3 265 6-274 44-360 (680)
32 3oja_B Anopheles plasmodium-re 100.0 2.1E-32 7.2E-37 301.6 18.6 294 4-315 92-392 (597)
33 4fmz_A Internalin; leucine ric 100.0 1.7E-31 5.7E-36 274.5 22.1 273 7-301 62-344 (347)
34 3o6n_A APL1; leucine-rich repe 100.0 8.6E-32 2.9E-36 281.2 18.5 269 9-302 43-330 (390)
35 2z63_A TOLL-like receptor 4, v 100.0 2.7E-31 9.2E-36 291.8 22.1 163 124-287 374-538 (570)
36 2z66_A Variable lymphocyte rec 100.0 6.1E-32 2.1E-36 272.6 14.5 252 13-284 9-265 (306)
37 2z81_A CD282 antigen, TOLL-lik 100.0 3.2E-32 1.1E-36 297.8 11.2 177 2-185 19-210 (549)
38 3zyi_A Leucine-rich repeat-con 100.0 1.9E-30 6.4E-35 276.4 23.3 250 13-283 56-306 (452)
39 2z80_A TOLL-like receptor 2, v 100.0 4.7E-32 1.6E-36 279.2 10.6 277 10-305 30-316 (353)
40 2z7x_B TOLL-like receptor 1, v 100.0 6.2E-31 2.1E-35 285.6 19.7 276 14-303 3-434 (520)
41 3zyj_A Leucine-rich repeat-con 100.0 2.2E-30 7.5E-35 274.9 22.1 247 37-304 45-293 (440)
42 3omv_A RAF proto-oncogene seri 100.0 4.6E-32 1.6E-36 269.8 8.3 175 393-597 103-302 (307)
43 4fcg_A Uncharacterized protein 100.0 5.9E-31 2E-35 267.6 16.5 236 10-281 80-315 (328)
44 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.8E-30 9.6E-35 282.9 23.0 280 10-303 30-463 (562)
45 1o6v_A Internalin A; bacterial 100.0 3E-30 1E-34 275.9 22.5 273 6-301 63-364 (466)
46 2z80_A TOLL-like receptor 2, v 100.0 2.4E-31 8.3E-36 273.9 13.3 266 2-285 45-319 (353)
47 4g8a_A TOLL-like receptor 4; l 100.0 3.9E-30 1.3E-34 286.1 23.7 142 143-284 441-584 (635)
48 2z66_A Variable lymphocyte rec 100.0 1.5E-31 5.2E-36 269.8 11.0 238 2-258 21-263 (306)
49 1o6v_A Internalin A; bacterial 100.0 3.3E-30 1.1E-34 275.6 21.7 268 10-302 45-343 (466)
50 4fcg_A Uncharacterized protein 100.0 1.4E-30 4.6E-35 264.9 16.6 221 64-301 82-312 (328)
51 3zyi_A Leucine-rich repeat-con 100.0 4.9E-30 1.7E-34 273.2 20.9 236 2-257 68-304 (452)
52 1ozn_A Reticulon 4 receptor; N 100.0 1.7E-30 5.7E-35 259.3 15.9 251 38-307 14-265 (285)
53 3zyj_A Leucine-rich repeat-con 100.0 4.9E-30 1.7E-34 272.2 20.2 252 12-284 44-296 (440)
54 3bz5_A Internalin-J, INLJ; leu 100.0 2.8E-29 9.7E-34 266.6 25.1 266 7-301 60-350 (457)
55 4gt4_A Tyrosine-protein kinase 100.0 3.1E-31 1.1E-35 265.0 8.8 172 390-593 98-304 (308)
56 4fmz_A Internalin; leucine ric 100.0 1.9E-29 6.3E-34 259.2 21.3 256 3-280 81-346 (347)
57 1ozn_A Reticulon 4 receptor; N 100.0 2.6E-30 8.7E-35 258.0 14.3 253 13-285 13-266 (285)
58 1wwl_A Monocyte differentiatio 100.0 5.1E-32 1.8E-36 273.8 1.5 251 8-281 40-310 (312)
59 4aoj_A High affinity nerve gro 100.0 1.2E-30 4.3E-35 263.2 11.1 175 390-596 112-320 (329)
60 4asz_A BDNF/NT-3 growth factor 100.0 6.2E-31 2.1E-35 261.7 8.5 175 390-596 84-290 (299)
61 3bz5_A Internalin-J, INLJ; leu 100.0 3.3E-29 1.1E-33 266.0 20.5 258 3-302 34-298 (457)
62 4ase_A Vascular endothelial gr 100.0 3E-30 1E-34 262.5 9.0 173 393-596 141-348 (353)
63 3hmm_A TGF-beta receptor type- 100.0 4.4E-30 1.5E-34 257.3 9.8 188 395-596 75-298 (303)
64 1wwl_A Monocyte differentiatio 100.0 1.6E-30 5.5E-35 262.8 2.6 249 30-303 38-309 (312)
65 3oja_A Leucine-rich immune mol 100.0 4.1E-30 1.4E-34 275.5 5.3 215 36-280 35-250 (487)
66 1jl5_A Outer protein YOPM; leu 100.0 1.9E-28 6.3E-33 260.1 17.8 270 1-301 24-328 (454)
67 3o53_A Protein LRIM1, AGAP0063 100.0 3.3E-30 1.1E-34 261.1 2.9 264 12-305 11-277 (317)
68 3oja_A Leucine-rich immune mol 100.0 2E-29 7E-34 270.0 4.6 234 12-275 35-270 (487)
69 2z62_A TOLL-like receptor 4, v 100.0 2.5E-27 8.6E-32 235.1 19.0 210 64-286 29-243 (276)
70 3o53_A Protein LRIM1, AGAP0063 100.0 5.4E-29 1.9E-33 252.2 7.0 245 9-283 32-279 (317)
71 1jl5_A Outer protein YOPM; leu 99.9 1.2E-27 4.2E-32 253.8 17.3 268 4-302 5-289 (454)
72 2z62_A TOLL-like receptor 4, v 99.9 5.7E-27 1.9E-31 232.5 17.7 224 15-258 11-239 (276)
73 4g3f_A NF-kappa-beta-inducing 99.9 2.6E-28 8.9E-33 245.1 8.0 179 391-599 120-320 (336)
74 3fpq_A Serine/threonine-protei 99.9 5.5E-28 1.9E-32 238.7 6.2 159 393-588 101-282 (290)
75 2o6q_A Variable lymphocyte rec 99.9 6.3E-26 2.1E-30 224.1 20.7 205 65-284 18-222 (270)
76 3rfs_A Internalin B, repeat mo 99.9 4.2E-26 1.4E-30 225.6 17.6 226 13-267 21-246 (272)
77 3rfs_A Internalin B, repeat mo 99.9 4.1E-27 1.4E-31 232.9 9.2 222 35-285 19-240 (272)
78 2o6q_A Variable lymphocyte rec 99.9 1.7E-25 5.8E-30 221.0 20.3 203 36-257 17-219 (270)
79 4fih_A Serine/threonine-protei 99.9 6.1E-27 2.1E-31 235.9 10.0 162 391-588 141-323 (346)
80 4b9d_A Serine/threonine-protei 99.9 2.4E-27 8.2E-32 239.2 6.5 163 391-588 93-276 (350)
81 1p9a_G Platelet glycoprotein I 99.9 1.2E-25 4E-30 224.2 18.4 205 58-282 6-210 (290)
82 1p9a_G Platelet glycoprotein I 99.9 1.6E-25 5.3E-30 223.3 19.0 203 31-256 6-208 (290)
83 1z7x_W Ribonuclease inhibitor; 99.9 2.8E-29 9.6E-34 268.3 -8.7 178 124-301 200-409 (461)
84 3g06_A SSPH2 (leucine-rich rep 99.9 6.8E-25 2.3E-29 239.8 25.4 236 11-302 61-296 (622)
85 4fie_A Serine/threonine-protei 99.9 6.4E-26 2.2E-30 234.1 10.9 162 391-588 218-400 (423)
86 4glp_A Monocyte differentiatio 99.9 7E-26 2.4E-30 228.6 10.5 226 36-280 65-307 (310)
87 4aw0_A HPDK1, 3-phosphoinositi 99.9 4.1E-26 1.4E-30 226.4 8.2 162 391-588 102-284 (311)
88 1z7x_W Ribonuclease inhibitor; 99.9 5.7E-28 1.9E-32 258.1 -8.3 281 7-301 24-352 (461)
89 3ubd_A Ribosomal protein S6 ki 99.9 1.6E-25 5.3E-30 222.2 9.8 154 392-583 97-271 (304)
90 3g06_A SSPH2 (leucine-rich rep 99.9 4E-24 1.4E-28 233.7 21.9 227 3-285 76-302 (622)
91 4glp_A Monocyte differentiatio 99.9 9.3E-25 3.2E-29 220.3 15.4 203 35-257 91-308 (310)
92 2ca6_A RAN GTPase-activating p 99.9 6.1E-27 2.1E-31 244.0 -2.1 245 27-284 24-320 (386)
93 2ca6_A RAN GTPase-activating p 99.9 2.1E-27 7.2E-32 247.5 -5.8 244 3-259 24-319 (386)
94 2xwt_C Thyrotropin receptor; s 99.9 8.7E-25 3E-29 211.8 12.9 196 36-253 32-236 (239)
95 3goz_A Leucine-rich repeat-con 99.9 1E-26 3.5E-31 240.0 -2.3 256 15-282 2-299 (362)
96 3hyh_A Carbon catabolite-derep 99.9 7.3E-25 2.5E-29 214.4 10.4 158 391-588 83-262 (275)
97 4g31_A Eukaryotic translation 99.9 3.1E-25 1.1E-29 220.9 7.2 167 393-588 87-279 (299)
98 2xwt_C Thyrotropin receptor; s 99.9 2.7E-24 9.1E-29 208.4 13.4 196 64-277 32-236 (239)
99 1h6u_A Internalin H; cell adhe 99.9 8E-24 2.7E-28 213.0 15.5 190 64-281 42-231 (308)
100 3m19_A Variable lymphocyte rec 99.9 3E-23 1E-27 202.5 18.8 179 12-209 15-193 (251)
101 3m19_A Variable lymphocyte rec 99.9 2.2E-23 7.6E-28 203.5 17.4 180 64-282 15-194 (251)
102 2ast_B S-phase kinase-associat 99.9 5.8E-26 2E-30 232.0 -1.1 221 13-253 49-282 (336)
103 3goz_A Leucine-rich repeat-con 99.9 8.4E-26 2.9E-30 233.2 -0.7 247 2-261 13-302 (362)
104 1h6u_A Internalin H; cell adhe 99.9 1.4E-23 4.9E-28 211.2 13.5 211 13-257 21-231 (308)
105 2qkw_B Protein kinase; three-h 99.9 1E-23 3.5E-28 213.9 11.9 190 390-596 104-316 (321)
106 2ast_B S-phase kinase-associat 99.9 2.5E-25 8.7E-30 227.2 0.0 239 6-265 63-315 (336)
107 4ay9_X Follicle-stimulating ho 99.9 3.3E-23 1.1E-27 212.6 14.5 241 14-278 12-257 (350)
108 4ay9_X Follicle-stimulating ho 99.9 2.7E-23 9.2E-28 213.3 13.3 245 38-305 12-260 (350)
109 3soc_A Activin receptor type-2 99.9 3.9E-23 1.3E-27 209.6 11.9 188 394-596 95-319 (322)
110 3uim_A Brassinosteroid insensi 99.9 2.4E-23 8.3E-28 211.6 9.1 184 390-592 96-308 (326)
111 2nru_A Interleukin-1 receptor- 99.9 5.2E-23 1.8E-27 207.2 11.1 185 391-595 100-306 (307)
112 2o6s_A Variable lymphocyte rec 99.9 5.6E-22 1.9E-26 187.6 17.2 162 64-244 29-190 (208)
113 2o6s_A Variable lymphocyte rec 99.9 6.7E-22 2.3E-26 187.1 17.0 182 13-220 9-190 (208)
114 4b99_A Mitogen-activated prote 99.9 2.4E-23 8.2E-28 215.4 7.3 187 391-588 129-344 (398)
115 3op5_A Serine/threonine-protei 99.9 3.2E-23 1.1E-27 214.0 8.1 184 394-597 125-331 (364)
116 3lb7_A RAF proto-oncogene seri 99.9 5E-23 1.7E-27 207.2 7.9 177 393-598 103-303 (307)
117 3v5w_A G-protein coupled recep 99.9 3.5E-23 1.2E-27 223.5 7.0 112 390-513 261-394 (689)
118 2psq_A Fibroblast growth facto 99.9 1.8E-22 6.2E-27 208.6 12.1 177 390-598 156-367 (370)
119 3p86_A Serine/threonine-protei 99.9 1.8E-22 6E-27 203.4 9.9 173 391-596 104-299 (309)
120 4f9c_A Cell division cycle 7-r 99.9 1.4E-22 4.8E-27 207.3 9.2 117 391-513 90-250 (361)
121 3uto_A Twitchin; kinase, muscl 99.9 3.7E-22 1.3E-26 216.7 11.7 164 391-588 224-410 (573)
122 3q4u_A Activin receptor type-1 99.9 1.6E-22 5.6E-27 202.9 8.3 177 393-593 78-300 (301)
123 3cbl_A C-FES, proto-oncogene t 99.9 1.6E-22 5.5E-27 209.7 8.3 172 391-597 182-376 (377)
124 3cvr_A Invasion plasmid antige 99.9 1.3E-21 4.4E-26 211.3 15.6 37 246-283 210-246 (571)
125 2qol_A Ephrin receptor; recept 99.9 3.2E-22 1.1E-26 206.9 10.1 174 391-597 116-311 (373)
126 3tt0_A Basic fibroblast growth 99.9 7E-22 2.4E-26 205.3 12.7 179 390-600 144-357 (382)
127 3g2f_A Bone morphogenetic prot 99.9 2.4E-22 8.3E-27 205.1 8.8 206 392-603 83-326 (336)
128 3kul_A Ephrin type-A receptor 99.9 4.1E-22 1.4E-26 202.3 10.3 173 391-596 120-314 (325)
129 3vhe_A Vascular endothelial gr 99.9 3.9E-22 1.3E-26 205.5 10.1 173 393-597 99-357 (359)
130 3ugc_A Tyrosine-protein kinase 99.9 2.4E-22 8.1E-27 201.2 7.6 186 394-597 86-293 (295)
131 3cvr_A Invasion plasmid antige 99.9 2E-21 6.8E-26 209.9 15.2 189 36-268 60-255 (571)
132 3s95_A LIMK-1, LIM domain kina 99.9 1.1E-21 3.7E-26 197.9 12.3 182 392-600 78-287 (310)
133 1csn_A Casein kinase-1; phosph 99.9 6.6E-22 2.3E-26 198.2 9.8 184 392-598 77-286 (298)
134 2v62_A Serine/threonine-protei 99.9 4.8E-22 1.7E-26 203.6 7.8 182 393-595 124-328 (345)
135 4hgt_A Casein kinase I isoform 99.9 1.4E-21 4.7E-26 195.6 10.9 184 392-598 76-283 (296)
136 1mqb_A Ephrin type-A receptor 99.8 1.5E-21 5.3E-26 198.8 11.2 189 391-613 116-331 (333)
137 3mdy_A Bone morphogenetic prot 99.8 1.4E-21 4.9E-26 199.3 10.7 180 394-597 108-333 (337)
138 3poz_A Epidermal growth factor 99.8 7E-22 2.4E-26 200.8 8.3 168 394-596 89-279 (327)
139 3fxz_A Serine/threonine-protei 99.8 1.6E-21 5.4E-26 195.3 10.1 161 392-588 88-269 (297)
140 3uzp_A CKI-delta, CKID, casein 99.8 1.9E-21 6.5E-26 194.6 10.6 183 392-598 76-283 (296)
141 1rjb_A FL cytokine receptor; k 99.8 1.4E-21 4.7E-26 200.2 9.5 176 391-597 119-336 (344)
142 3l9p_A Anaplastic lymphoma kin 99.8 8E-22 2.7E-26 203.6 7.7 175 391-597 144-347 (367)
143 4hcu_A Tyrosine-protein kinase 99.8 1.5E-21 5.1E-26 192.6 9.2 171 391-596 75-267 (269)
144 3kex_A Receptor tyrosine-prote 99.8 1.2E-21 4E-26 199.0 8.6 170 393-596 86-277 (325)
145 2eva_A TAK1 kinase - TAB1 chim 99.8 9.5E-22 3.3E-26 197.9 7.8 171 394-599 72-267 (307)
146 1qcf_A Haematopoetic cell kina 99.8 6.2E-22 2.1E-26 210.4 6.7 169 393-595 254-444 (454)
147 3c1x_A Hepatocyte growth facto 99.8 1.6E-21 5.5E-26 201.5 9.3 178 392-601 162-361 (373)
148 1k9a_A Carboxyl-terminal SRC k 99.8 1.6E-21 5.6E-26 206.8 9.6 166 393-596 259-446 (450)
149 2c30_A Serine/threonine-protei 99.8 5.3E-21 1.8E-25 193.7 12.9 161 392-588 113-294 (321)
150 3sxs_A Cytoplasmic tyrosine-pr 99.8 1.9E-21 6.6E-26 191.6 9.4 171 391-596 73-265 (268)
151 3og7_A AKAP9-BRAF fusion prote 99.8 6E-22 2.1E-26 197.6 5.8 174 392-594 90-287 (289)
152 1luf_A Muscle-specific tyrosin 99.8 1E-21 3.5E-26 201.0 7.5 176 391-598 120-338 (343)
153 1t46_A HOMO sapiens V-KIT hard 99.8 2.4E-21 8.2E-26 195.5 10.0 176 391-597 97-309 (313)
154 1opk_A P150, C-ABL, proto-onco 99.8 1E-21 3.6E-26 210.7 7.7 171 390-594 285-477 (495)
155 1u59_A Tyrosine-protein kinase 99.8 3.5E-21 1.2E-25 191.8 11.0 184 393-609 81-286 (287)
156 1nxk_A MAP kinase-activated pr 99.8 2.8E-21 9.5E-26 201.7 10.6 167 393-588 131-321 (400)
157 2pvf_A Fibroblast growth facto 99.8 3.5E-21 1.2E-25 196.3 10.9 178 391-600 111-323 (334)
158 3lxp_A Non-receptor tyrosine-p 99.8 1.7E-21 5.8E-26 197.2 8.4 186 393-600 107-315 (318)
159 2v70_A SLIT-2, SLIT homolog 2 99.8 2.7E-20 9.2E-25 177.5 16.3 132 65-208 34-166 (220)
160 2ozo_A Tyrosine-protein kinase 99.8 3.9E-21 1.3E-25 211.3 11.6 173 394-599 408-602 (613)
161 2jii_A Serine/threonine-protei 99.8 2.6E-21 8.8E-26 198.8 9.6 188 393-599 130-340 (352)
162 2izr_A Casein kinase I isoform 99.8 3.1E-21 1.1E-25 196.4 10.0 182 392-597 76-283 (330)
163 2i1m_A Macrophage colony-stimu 99.8 9.9E-22 3.4E-26 200.3 6.2 178 391-599 120-330 (333)
164 3gen_A Tyrosine-protein kinase 99.8 3.8E-21 1.3E-25 191.1 10.2 171 391-596 89-281 (283)
165 2ivs_A Proto-oncogene tyrosine 99.8 2.2E-21 7.7E-26 195.8 8.4 174 391-596 96-312 (314)
166 3zgw_A Maternal embryonic leuc 99.8 3.2E-21 1.1E-25 196.8 9.5 161 391-588 78-260 (347)
167 1mp8_A Focal adhesion kinase 1 99.8 2.6E-21 8.9E-26 192.2 8.5 171 393-598 87-279 (281)
168 2v9t_B SLIT homolog 2 protein 99.8 5.2E-21 1.8E-25 182.4 10.2 153 128-283 16-168 (220)
169 1h6t_A Internalin B; cell adhe 99.8 4.2E-21 1.4E-25 191.4 9.9 167 64-256 47-213 (291)
170 1tki_A Titin; serine kinase, m 99.8 5.6E-21 1.9E-25 193.4 10.9 163 392-588 72-257 (321)
171 2xir_A Vascular endothelial gr 99.8 3.7E-21 1.3E-25 194.4 9.5 174 393-597 104-312 (316)
172 3sv0_A Casein kinase I-like; t 99.8 5.1E-21 1.7E-25 203.6 10.8 182 392-596 74-279 (483)
173 3gxj_A TGF-beta receptor type- 99.8 1.3E-22 4.4E-27 203.8 -1.4 179 395-596 75-298 (303)
174 2xot_A Amphoterin-induced prot 99.8 1.3E-20 4.3E-25 194.2 13.3 175 38-231 21-201 (361)
175 1h6t_A Internalin B; cell adhe 99.8 8.1E-21 2.8E-25 189.3 11.5 189 13-233 26-214 (291)
176 1b6c_B TGF-B superfamily recep 99.8 3.3E-21 1.1E-25 197.1 8.9 180 395-597 114-338 (342)
177 1fmk_A C-SRC, P60-SRC, tyrosin 99.8 2.2E-21 7.7E-26 205.9 7.9 168 394-595 251-440 (452)
178 3dtc_A Mitogen-activated prote 99.8 4.9E-21 1.7E-25 189.0 9.6 164 391-593 76-271 (271)
179 2xot_A Amphoterin-induced prot 99.8 9.1E-21 3.1E-25 195.2 11.8 182 65-282 20-204 (361)
180 3tki_A Serine/threonine-protei 99.8 1.9E-21 6.4E-26 197.2 6.5 165 391-588 75-261 (323)
181 1m9s_A Internalin B; cell inva 99.8 2.3E-20 7.8E-25 203.8 15.3 187 14-232 24-210 (605)
182 4eqm_A Protein kinase; transfe 99.8 4.1E-21 1.4E-25 192.0 8.8 172 391-594 81-274 (294)
183 3fe3_A MAP/microtubule affinit 99.8 7.7E-21 2.6E-25 192.8 10.8 158 392-588 85-264 (328)
184 4fl3_A Tyrosine-protein kinase 99.8 3.5E-21 1.2E-25 212.3 8.9 170 393-597 441-633 (635)
185 3f66_A Hepatocyte growth facto 99.8 6.6E-21 2.3E-25 190.9 10.0 177 391-599 97-295 (298)
186 2v9t_B SLIT homolog 2 protein 99.8 5.7E-20 1.9E-24 175.2 15.9 152 38-208 14-165 (220)
187 2yab_A Death-associated protei 99.8 8.3E-21 2.9E-25 195.0 10.9 163 391-588 85-272 (361)
188 2x4f_A Myosin light chain kina 99.8 9.1E-21 3.1E-25 195.9 11.0 169 391-593 156-349 (373)
189 3kmu_A ILK, integrin-linked ki 99.8 1.1E-20 3.8E-25 186.3 11.1 163 394-595 82-270 (271)
190 3lxl_A Tyrosine-protein kinase 99.8 2.2E-21 7.7E-26 197.1 6.1 191 392-600 97-308 (327)
191 2v70_A SLIT-2, SLIT homolog 2 99.8 5.1E-20 1.7E-24 175.6 15.1 158 13-188 13-170 (220)
192 3t9t_A Tyrosine-protein kinase 99.8 6E-21 2.1E-25 187.9 8.7 171 391-596 73-265 (267)
193 3soa_A Calcium/calmodulin-depe 99.8 2E-20 6.8E-25 197.4 13.1 164 391-588 80-267 (444)
194 3brb_A Proto-oncogene tyrosine 99.8 1.1E-20 3.9E-25 190.6 10.6 172 395-598 115-311 (313)
195 3cc6_A Protein tyrosine kinase 99.8 5.4E-21 1.8E-25 189.9 8.0 171 393-598 84-276 (281)
196 2y0a_A Death-associated protei 99.8 1.3E-20 4.4E-25 191.3 10.9 163 391-588 84-271 (326)
197 3qup_A Tyrosine-protein kinase 99.8 6.8E-21 2.3E-25 193.2 8.7 170 396-597 106-300 (323)
198 2w1i_A JAK2; chromosomal rearr 99.8 4.2E-21 1.4E-25 195.0 6.9 184 394-598 117-325 (326)
199 4e5w_A Tyrosine-protein kinase 99.8 4.4E-21 1.5E-25 192.6 6.9 180 394-594 98-301 (302)
200 3kfa_A Tyrosine-protein kinase 99.8 9.3E-21 3.2E-25 188.8 9.2 173 391-597 79-273 (288)
201 1kob_A Twitchin; kinase, intra 99.8 2.5E-20 8.5E-25 193.2 12.7 164 391-588 118-304 (387)
202 1qpc_A LCK kinase; alpha beta 99.8 1E-20 3.4E-25 187.7 9.3 172 393-598 79-272 (279)
203 1m9s_A Internalin B; cell inva 99.8 1.5E-20 5E-25 205.3 11.5 191 36-258 22-212 (605)
204 2w4o_A Calcium/calmodulin-depe 99.8 2.1E-20 7.3E-25 191.5 12.0 164 391-588 118-305 (349)
205 2bdw_A Hypothetical protein K1 99.8 2.2E-20 7.6E-25 192.2 12.1 163 391-588 98-284 (362)
206 1o6l_A RAC-beta serine/threoni 99.8 2.3E-20 7.7E-25 190.0 12.0 160 391-588 75-260 (337)
207 3txo_A PKC-L, NPKC-ETA, protei 99.8 7.7E-21 2.6E-25 194.7 8.4 160 391-588 94-280 (353)
208 4euu_A Serine/threonine-protei 99.8 1.5E-20 5E-25 190.4 10.4 190 393-593 81-307 (319)
209 3p1a_A MYT1 kinase, membrane-a 99.8 6.6E-21 2.3E-25 192.2 7.6 158 391-588 127-304 (311)
210 2wqm_A Serine/threonine-protei 99.8 1.6E-20 5.5E-25 189.3 10.0 176 392-598 103-300 (310)
211 1byg_A CSK, protein (C-termina 99.8 6.9E-21 2.4E-25 188.8 7.1 167 393-597 87-275 (278)
212 4f0f_A Serine/threonine-protei 99.8 2.7E-20 9.2E-25 185.4 11.3 162 396-593 96-287 (287)
213 3pls_A Macrophage-stimulating 99.8 2.4E-20 8.3E-25 186.7 10.9 179 393-602 95-294 (298)
214 1xbb_A Tyrosine-protein kinase 99.8 1E-20 3.6E-25 188.8 8.2 175 393-601 89-285 (291)
215 3lzb_A Epidermal growth factor 99.8 8.6E-21 2.9E-25 192.7 7.4 168 394-596 89-279 (327)
216 2a19_B Interferon-induced, dou 99.8 1.1E-20 3.8E-25 187.8 8.1 163 393-596 92-275 (284)
217 3niz_A Rhodanese family protei 99.8 1.1E-20 3.7E-25 190.6 8.0 186 391-588 89-300 (311)
218 2r5t_A Serine/threonine-protei 99.8 1.8E-20 6.2E-25 193.2 9.8 162 391-590 109-291 (373)
219 3lm5_A Serine/threonine-protei 99.8 2.5E-20 8.5E-25 189.3 10.7 165 391-588 99-287 (327)
220 2i0e_A Protein kinase C-beta I 99.8 2.7E-20 9.2E-25 190.6 10.7 112 391-512 91-223 (353)
221 2h8h_A Proto-oncogene tyrosine 99.8 5E-21 1.7E-25 207.4 5.4 166 394-594 334-522 (535)
222 1xjd_A Protein kinase C, theta 99.8 1.3E-20 4.5E-25 192.3 8.1 159 391-587 88-268 (345)
223 3e6j_A Variable lymphocyte rec 99.8 3.1E-19 1.1E-23 171.3 17.2 132 64-208 41-172 (229)
224 3e6j_A Variable lymphocyte rec 99.8 1.3E-19 4.6E-24 173.8 14.6 154 127-284 23-176 (229)
225 1p4o_A Insulin-like growth fac 99.8 8.8E-21 3E-25 192.2 6.6 173 391-595 98-299 (322)
226 2zv2_A Calcium/calmodulin-depe 99.8 3.1E-20 1.1E-24 186.0 10.5 159 393-588 110-292 (298)
227 1fvr_A Tyrosine-protein kinase 99.8 2.2E-20 7.6E-25 189.7 9.5 172 392-598 97-303 (327)
228 3ogk_B Coronatine-insensitive 99.8 1.7E-22 5.9E-27 222.6 -6.7 216 8-226 161-410 (592)
229 4dc2_A Protein kinase C IOTA t 99.8 2.2E-20 7.6E-25 193.7 9.4 113 390-512 122-255 (396)
230 4b8c_D Glucose-repressible alc 99.8 2.2E-20 7.4E-25 209.1 9.9 223 35-281 173-405 (727)
231 3c0i_A Peripheral plasma membr 99.8 2.5E-20 8.5E-25 191.2 9.4 165 392-588 97-286 (351)
232 3g33_A Cell division protein k 99.8 1.2E-20 4.1E-25 190.0 6.9 180 395-588 93-296 (308)
233 2yfx_A Tyrosine-protein kinase 99.8 2.4E-20 8.1E-25 189.5 9.1 175 391-597 103-306 (327)
234 4aw2_A Serine/threonine-protei 99.8 2.2E-20 7.4E-25 196.4 9.0 115 390-512 143-283 (437)
235 3v8s_A RHO-associated protein 99.8 1.3E-20 4.6E-25 196.4 7.3 113 390-512 138-275 (410)
236 3e7e_A HBUB1, BUB1A, mitotic c 99.8 8.8E-21 3E-25 195.8 5.8 168 392-596 138-340 (365)
237 1dce_A Protein (RAB geranylger 99.8 5.7E-23 2E-27 223.0 -11.3 216 32-274 346-567 (567)
238 3kn6_A Ribosomal protein S6 ki 99.8 8.8E-21 3E-25 192.4 5.4 171 391-588 76-270 (325)
239 4eut_A Serine/threonine-protei 99.8 1.8E-20 6.2E-25 195.5 7.9 194 393-597 81-311 (396)
240 1fot_A TPK1 delta, CAMP-depend 99.8 5.6E-20 1.9E-24 185.6 11.1 156 392-588 77-258 (318)
241 3ork_A Serine/threonine protei 99.8 1.3E-20 4.3E-25 190.1 6.2 168 395-593 90-279 (311)
242 1dce_A Protein (RAB geranylger 99.8 1E-22 3.5E-27 221.1 -9.8 202 59-296 346-566 (567)
243 2y4i_B KSR2, HKSR2, kinase sup 99.8 1.9E-20 6.5E-25 189.5 7.5 179 391-600 99-307 (319)
244 2h34_A Serine/threonine-protei 99.8 5E-20 1.7E-24 185.5 10.6 170 392-595 105-296 (309)
245 1u46_A ACK-1, activated CDC42 99.8 2E-20 7E-25 186.6 7.5 172 394-597 93-286 (291)
246 3is5_A Calcium-dependent prote 99.8 1.9E-20 6.4E-25 186.4 7.1 165 391-588 90-278 (285)
247 2qr7_A Ribosomal protein S6 ki 99.8 3.6E-20 1.2E-24 189.0 9.3 167 391-588 86-277 (342)
248 1t4h_A Serine/threonine-protei 99.8 1.7E-20 6E-25 187.1 6.8 159 393-588 101-282 (290)
249 4fr4_A YANK1, serine/threonine 99.8 3.1E-20 1.1E-24 191.9 8.9 161 391-587 85-270 (384)
250 3pfq_A PKC-B, PKC-beta, protei 99.8 6.1E-20 2.1E-24 203.7 11.8 156 390-583 411-587 (674)
251 2a2a_A Death-associated protei 99.8 6.7E-20 2.3E-24 185.7 11.0 163 391-588 85-272 (321)
252 2y7j_A Phosphorylase B kinase 99.8 4.1E-20 1.4E-24 190.6 9.5 163 391-588 170-359 (365)
253 2j0j_A Focal adhesion kinase 1 99.8 4.4E-20 1.5E-24 204.2 10.3 169 393-596 462-652 (656)
254 4ejn_A RAC-alpha serine/threon 99.8 4.6E-20 1.6E-24 195.6 10.0 159 392-588 219-404 (446)
255 3qd2_B Eukaryotic translation 99.8 5.8E-20 2E-24 186.9 10.4 167 393-588 133-325 (332)
256 3i6u_A CDS1, serine/threonine- 99.8 5.8E-20 2E-24 193.0 10.6 162 393-588 211-399 (419)
257 1rdq_E PKA C-alpha, CAMP-depen 99.8 6.2E-20 2.1E-24 187.9 10.2 157 391-588 111-293 (350)
258 2y94_A 5'-AMP-activated protei 99.8 8.7E-20 3E-24 193.7 11.6 158 392-588 87-266 (476)
259 4ezg_A Putative uncharacterize 99.8 1.6E-19 5.3E-24 169.2 11.8 153 32-208 41-194 (197)
260 3gni_B Strad alpha; kinase fol 99.8 2.9E-20 1E-24 193.6 7.6 121 392-513 97-240 (389)
261 3ogk_B Coronatine-insensitive 99.8 5.6E-22 1.9E-26 218.6 -5.8 290 5-301 186-524 (592)
262 4agu_A Cyclin-dependent kinase 99.8 4.4E-20 1.5E-24 186.1 8.5 185 392-588 73-284 (311)
263 3h4j_B AMPK kdaid, SNF1-like p 99.8 2.3E-20 7.7E-25 189.8 6.4 157 392-588 80-258 (336)
264 2yex_A Serine/threonine-protei 99.8 3.5E-20 1.2E-24 183.4 7.5 164 392-588 76-261 (276)
265 3f3z_A Calcium/calmodulin-depe 99.8 6.1E-20 2.1E-24 181.8 9.3 163 391-588 76-261 (277)
266 2ac3_A MAP kinase-interacting 99.8 1.7E-20 5.9E-25 189.5 5.4 185 392-588 82-295 (316)
267 3llt_A Serine/threonine kinase 99.8 9.9E-20 3.4E-24 187.6 11.1 110 392-513 107-262 (360)
268 1xeu_A Internalin C; cellular 99.8 1.6E-20 5.6E-25 184.1 4.8 170 10-210 18-187 (263)
269 3hko_A Calcium/calmodulin-depe 99.8 8.6E-20 2.9E-24 186.8 10.2 171 391-588 98-330 (345)
270 1vzo_A Ribosomal protein S6 ki 99.8 7.9E-20 2.7E-24 187.8 9.9 166 391-589 129-322 (355)
271 4fvq_A Tyrosine-protein kinase 99.8 2E-20 6.8E-25 186.5 5.1 164 391-595 82-275 (289)
272 3dbq_A Dual specificity protei 99.8 1.3E-20 4.4E-25 192.8 3.5 163 391-588 79-273 (343)
273 2acx_A G protein-coupled recep 99.8 6.2E-20 2.1E-24 197.7 8.9 165 391-588 254-444 (576)
274 1u5q_A Serine/threonine protei 99.8 6.1E-20 2.1E-24 187.9 8.4 157 392-588 125-305 (348)
275 3mtl_A Cell division protein k 99.8 1.5E-20 5.1E-25 190.7 3.7 192 391-594 70-289 (324)
276 3a62_A Ribosomal protein S6 ki 99.8 1.3E-19 4.4E-24 184.0 10.4 160 391-588 91-276 (327)
277 3a8x_A Protein kinase C IOTA t 99.8 1.4E-19 4.8E-24 184.9 10.7 112 391-512 80-212 (345)
278 3kk8_A Calcium/calmodulin depe 99.8 1.4E-19 5E-24 179.7 10.6 163 391-588 75-261 (284)
279 2vd5_A DMPK protein; serine/th 99.8 7.3E-20 2.5E-24 191.0 8.7 116 390-513 130-273 (412)
280 2zmd_A Dual specificity protei 99.8 6.8E-20 2.3E-24 190.6 8.4 163 391-588 126-320 (390)
281 3eqc_A Dual specificity mitoge 99.8 4.4E-20 1.5E-24 190.2 6.8 110 392-513 102-233 (360)
282 3c4z_A Rhodopsin kinase; Ser/T 99.8 1.8E-19 6.3E-24 193.5 11.8 116 391-513 255-392 (543)
283 3bhy_A Death-associated protei 99.8 1.5E-19 5E-24 179.6 10.1 170 391-595 78-274 (283)
284 3ll6_A Cyclin G-associated kin 99.8 9.8E-20 3.4E-24 185.6 8.8 176 392-598 105-311 (337)
285 3fdn_A Serine/threonine-protei 99.8 1.6E-19 5.4E-24 179.0 10.0 159 391-589 79-258 (279)
286 3byv_A Rhoptry kinase; malaria 99.8 1.4E-20 4.9E-25 195.1 2.5 158 396-597 175-370 (377)
287 3uc3_A Serine/threonine-protei 99.8 1.1E-19 3.8E-24 187.0 9.1 164 392-588 87-274 (361)
288 2pmi_A Negative RE, cyclin-dep 99.8 9.7E-20 3.3E-24 184.1 8.4 115 391-513 73-212 (317)
289 2vx3_A Dual specificity tyrosi 99.8 2E-19 6.7E-24 186.8 10.9 109 393-513 128-261 (382)
290 3lij_A Calcium/calmodulin depe 99.8 1.7E-19 5.9E-24 193.8 10.8 168 391-593 106-298 (494)
291 2clq_A Mitogen-activated prote 99.8 5.7E-20 2E-24 183.7 6.3 165 392-588 90-278 (295)
292 3cok_A Serine/threonine-protei 99.8 1.4E-19 4.7E-24 179.4 8.9 160 392-588 82-262 (278)
293 3nyv_A Calmodulin-domain prote 99.8 1.6E-19 5.3E-24 193.8 10.0 163 391-588 96-281 (484)
294 3mwu_A Calmodulin-domain prote 99.8 3E-19 1E-23 191.6 12.0 163 391-588 91-276 (486)
295 3dls_A PAS domain-containing s 99.8 2.1E-19 7.2E-24 183.0 10.3 155 390-589 98-275 (335)
296 2w5a_A Serine/threonine-protei 99.8 4.5E-20 1.6E-24 182.9 5.2 164 393-590 79-269 (279)
297 3a7i_A MST3 kinase, serine/thr 99.8 1.7E-19 5.9E-24 181.0 9.3 160 392-589 91-271 (303)
298 4aaa_A Cyclin-dependent kinase 99.8 5.3E-20 1.8E-24 187.3 5.5 187 391-588 94-306 (331)
299 4ezg_A Putative uncharacterize 99.8 3.4E-19 1.2E-23 166.8 10.5 152 9-184 42-194 (197)
300 3q5i_A Protein kinase; CDPK, m 99.8 1.7E-19 5.7E-24 194.4 9.4 164 390-588 115-301 (504)
301 3mi9_A Cell division protein k 99.8 2E-19 7E-24 184.5 9.6 189 393-588 96-311 (351)
302 2eue_A Carbon catabolite derep 99.8 1.8E-19 6.1E-24 178.2 8.8 158 391-588 83-262 (275)
303 3fhr_A MAP kinase-activated pr 99.8 8.7E-20 3E-24 186.0 6.7 165 393-588 98-287 (336)
304 4b8c_D Glucose-repressible alc 99.8 4.2E-20 1.4E-24 206.8 4.7 219 11-257 173-405 (727)
305 2vgo_A Serine/threonine-protei 99.8 3.8E-19 1.3E-23 176.8 11.0 157 392-588 85-262 (284)
306 3kvw_A DYRK2, dual specificity 99.8 1.7E-19 5.7E-24 190.1 8.8 109 393-513 171-302 (429)
307 3fme_A Dual specificity mitoge 99.8 1.1E-19 3.9E-24 181.1 6.7 163 392-588 77-266 (290)
308 1xeu_A Internalin C; cellular 99.8 1.3E-19 4.5E-24 177.7 7.0 167 64-257 20-186 (263)
309 2rku_A Serine/threonine-protei 99.8 2.5E-19 8.4E-24 179.1 9.1 161 391-589 85-266 (294)
310 3oz6_A Mitogen-activated prote 99.8 4.8E-19 1.7E-23 184.3 11.5 116 393-513 83-234 (388)
311 2buj_A Serine/threonine-protei 99.8 4.2E-20 1.4E-24 186.8 3.3 177 393-594 102-305 (317)
312 2jam_A Calcium/calmodulin-depe 99.8 3.5E-19 1.2E-23 178.9 10.1 162 391-588 76-261 (304)
313 1ob3_A PFPK5, cell division co 99.8 6.1E-20 2.1E-24 182.9 4.4 112 392-513 71-204 (288)
314 2vwi_A Serine/threonine-protei 99.8 1.5E-19 5E-24 181.5 7.1 176 392-588 84-287 (303)
315 2owb_A Serine/threonine-protei 99.8 2.7E-19 9.1E-24 182.4 9.1 160 391-588 111-291 (335)
316 1w8a_A SLIT protein; signaling 99.8 3.2E-19 1.1E-23 166.1 8.9 157 150-309 11-168 (192)
317 1phk_A Phosphorylase kinase; g 99.8 5.8E-19 2E-23 176.7 11.4 163 391-588 94-283 (298)
318 3nsz_A CK II alpha, casein kin 99.8 2.9E-19 1E-23 181.7 9.3 181 393-588 105-319 (330)
319 3q60_A ROP5B; pseudokinase, tr 99.8 3.5E-20 1.2E-24 191.8 2.3 172 394-597 161-363 (371)
320 3ttj_A Mitogen-activated prote 99.8 4.3E-19 1.5E-23 188.6 10.8 181 393-588 139-355 (464)
321 3an0_A Dual specificity mitoge 99.8 7.8E-20 2.7E-24 186.8 4.7 163 392-588 121-310 (340)
322 4e7w_A Glycogen synthase kinas 99.8 1.1E-19 3.7E-24 189.4 5.8 186 393-588 110-321 (394)
323 1ua2_A CAK, cell division prot 99.8 8.7E-20 3E-24 186.9 4.8 185 391-588 82-291 (346)
324 1z57_A Dual specificity protei 99.8 7.3E-19 2.5E-23 179.2 11.6 110 392-513 88-237 (339)
325 2h6d_A 5'-AMP-activated protei 99.8 6.1E-19 2.1E-23 174.4 10.7 158 392-588 82-261 (276)
326 3com_A Serine/threonine-protei 99.8 5.8E-19 2E-23 178.1 10.7 162 393-588 96-278 (314)
327 2x7f_A TRAF2 and NCK-interacti 99.8 3.8E-19 1.3E-23 180.5 9.3 162 393-588 99-286 (326)
328 3o0g_A Cell division protein k 99.8 1.3E-19 4.5E-24 180.9 5.3 111 392-512 72-204 (292)
329 2ycf_A Serine/threonine-protei 99.8 4E-19 1.4E-23 180.0 8.6 161 394-588 87-274 (322)
330 2xrw_A Mitogen-activated prote 99.8 8.4E-19 2.9E-23 181.3 10.7 106 394-513 103-229 (371)
331 3e3p_A Protein kinase, putativ 99.8 3.6E-19 1.2E-23 183.3 7.5 183 395-588 100-314 (360)
332 1blx_A Cyclin-dependent kinase 99.8 1.5E-19 5.2E-24 183.4 4.6 112 392-513 90-222 (326)
333 3eb0_A Putative uncharacterize 99.8 2.3E-19 7.7E-24 186.5 5.9 192 392-595 109-330 (383)
334 2eu9_A Dual specificity protei 99.8 7.6E-19 2.6E-23 180.4 9.8 109 393-513 94-242 (355)
335 3gbz_A Kinase, CMGC CDK; ssgci 99.8 2.2E-19 7.6E-24 182.5 5.6 112 391-513 103-241 (329)
336 1wak_A Serine/threonine-protei 99.8 1.1E-18 3.8E-23 182.1 11.0 111 392-514 116-297 (397)
337 2wei_A Calmodulin-domain prote 99.8 1.5E-18 5E-23 172.8 11.1 162 392-588 92-276 (287)
338 3qyz_A Mitogen-activated prote 99.8 9.1E-19 3.1E-23 180.6 9.5 181 394-588 103-313 (364)
339 2r3i_A Cell division protein k 99.8 3.1E-19 1.1E-23 178.7 5.8 113 392-513 73-207 (299)
340 1cm8_A Phosphorylated MAP kina 99.8 1.4E-18 4.6E-23 179.3 10.0 176 394-588 103-307 (367)
341 1x8b_A WEE1HU, WEE1-like prote 99.8 1E-18 3.5E-23 173.8 8.8 156 392-588 82-279 (289)
342 2i6l_A Mitogen-activated prote 99.8 1.5E-18 5.3E-23 175.3 10.1 184 391-588 92-305 (320)
343 2wtk_C Serine/threonine-protei 99.7 2.3E-18 8E-23 172.9 11.0 163 392-589 79-264 (305)
344 3sb4_A Hypothetical leucine ri 99.7 2.1E-19 7.1E-24 182.6 2.8 102 170-273 225-327 (329)
345 2j7t_A Serine/threonine-protei 99.7 3.3E-19 1.1E-23 178.8 4.2 163 392-588 87-275 (302)
346 3cek_A Dual specificity protei 99.7 4.7E-19 1.6E-23 178.7 4.8 162 392-588 99-292 (313)
347 3pg1_A Mitogen-activated prote 99.7 1.4E-18 4.9E-23 179.0 8.5 182 393-588 106-316 (362)
348 2pml_X PFPK7, Ser/Thr protein 99.7 2.4E-18 8.1E-23 176.3 9.9 176 392-588 114-322 (348)
349 3a99_A Proto-oncogene serine/t 99.7 5.6E-19 1.9E-23 178.7 4.5 152 391-588 118-293 (320)
350 1j1b_A Glycogen synthase kinas 99.7 5.1E-19 1.7E-23 185.9 4.3 183 394-588 126-336 (420)
351 1w8a_A SLIT protein; signaling 99.7 1.2E-17 4E-22 155.6 12.8 129 66-209 11-140 (192)
352 4exu_A Mitogen-activated prote 99.7 1.8E-18 6.1E-23 178.8 8.0 173 396-588 122-323 (371)
353 3rp9_A Mitogen-activated prote 99.7 3.3E-18 1.1E-22 182.1 10.2 112 393-508 129-282 (458)
354 2fst_X Mitogen-activated prote 99.7 1.9E-18 6.6E-23 178.0 8.2 176 394-588 107-311 (367)
355 3qa8_A MGC80376 protein; kinas 99.7 5.5E-19 1.9E-23 192.3 4.0 113 392-512 89-225 (676)
356 1q8y_A SR protein kinase; tran 99.7 2E-18 6.9E-23 178.6 8.1 108 394-513 103-238 (373)
357 2rio_A Serine/threonine-protei 99.7 1.4E-18 4.9E-23 183.3 6.8 170 392-588 80-295 (434)
358 2b9h_A MAP kinase FUS3, mitoge 99.7 3.4E-18 1.2E-22 175.5 9.4 187 393-588 86-305 (353)
359 3rgf_A Cyclin-dependent kinase 99.7 1.4E-18 4.9E-23 181.8 6.4 117 392-513 91-239 (405)
360 3n9x_A Phosphotransferase; mal 99.7 2.6E-18 8.7E-23 181.3 8.3 115 394-512 103-254 (432)
361 2p1m_B Transport inhibitor res 99.7 2.3E-20 7.8E-25 205.7 -8.1 290 9-302 128-493 (594)
362 2iwi_A Serine/threonine-protei 99.7 1.6E-18 5.4E-23 174.8 5.9 152 391-588 108-283 (312)
363 1zy4_A Serine/threonine-protei 99.7 6.5E-18 2.2E-22 169.3 9.9 169 392-588 86-283 (303)
364 3p23_A Serine/threonine-protei 99.7 5.8E-18 2E-22 178.1 9.1 166 391-588 88-283 (432)
365 2p1m_B Transport inhibitor res 99.7 1.3E-20 4.6E-25 207.6 -11.8 288 9-301 103-467 (594)
366 2dyl_A Dual specificity mitoge 99.7 4.1E-18 1.4E-22 172.1 7.1 162 392-588 95-283 (318)
367 3coi_A Mitogen-activated prote 99.7 3.7E-18 1.3E-22 175.3 6.9 174 395-588 103-305 (353)
368 3m2w_A MAP kinase-activated pr 99.7 5.4E-18 1.8E-22 169.8 7.1 149 393-588 87-256 (299)
369 2ell_A Acidic leucine-rich nuc 99.7 1.9E-17 6.6E-22 150.6 9.9 132 35-184 24-160 (168)
370 2wfh_A SLIT homolog 2 protein 99.7 1.6E-17 5.4E-22 154.7 9.0 131 150-284 13-143 (193)
371 3sb4_A Hypothetical leucine ri 99.7 3.4E-17 1.2E-21 166.3 12.2 104 145-250 224-328 (329)
372 3aln_A Dual specificity mitoge 99.7 5.2E-18 1.8E-22 172.2 6.0 165 392-588 92-285 (327)
373 2ell_A Acidic leucine-rich nuc 99.7 6.3E-17 2.2E-21 147.2 10.3 132 64-209 25-161 (168)
374 2je0_A Acidic leucine-rich nuc 99.7 3.5E-17 1.2E-21 145.7 7.9 128 10-155 16-148 (149)
375 3dzo_A Rhoptry kinase domain; 99.7 5.5E-18 1.9E-22 177.6 2.0 157 396-596 180-373 (413)
376 2pzi_A Probable serine/threoni 99.7 3.2E-17 1.1E-21 182.9 8.2 149 396-595 159-328 (681)
377 4fdw_A Leucine rich hypothetic 99.7 1.3E-15 4.5E-20 158.1 19.7 246 10-284 112-362 (401)
378 2je0_A Acidic leucine-rich nuc 99.7 7.8E-17 2.7E-21 143.4 9.0 126 64-203 18-148 (149)
379 2wfh_A SLIT homolog 2 protein 99.7 3.8E-16 1.3E-20 145.3 13.3 127 66-208 13-139 (193)
380 2o6r_A Variable lymphocyte rec 99.7 2.5E-16 8.4E-21 144.6 11.7 134 149-285 9-142 (177)
381 2o6r_A Variable lymphocyte rec 99.7 8.2E-16 2.8E-20 141.1 13.6 129 66-209 10-138 (177)
382 4fdw_A Leucine rich hypothetic 99.6 1.7E-14 5.7E-19 149.7 21.3 241 12-279 136-382 (401)
383 1a9n_A U2A', U2A'; complex (nu 99.6 1E-15 3.5E-20 140.2 8.9 133 31-184 15-153 (176)
384 3uqc_A Probable conserved tran 99.6 4.4E-16 1.5E-20 154.6 4.7 148 392-599 102-269 (286)
385 1a9n_A U2A', U2A'; complex (nu 99.6 1.7E-15 5.7E-20 138.9 8.0 132 58-208 15-153 (176)
386 1ds9_A Outer arm dynein; leuci 99.6 7.1E-18 2.4E-22 157.9 -8.9 152 35-209 18-186 (198)
387 1ds9_A Outer arm dynein; leuci 99.6 1.3E-17 4.6E-22 156.1 -7.3 139 130-273 25-180 (198)
388 3g39_A Variable lymphocyte rec 99.5 6.7E-14 2.3E-18 127.2 11.8 106 65-185 11-116 (170)
389 3g39_A Variable lymphocyte rec 99.5 4E-14 1.4E-18 128.7 9.8 90 195-284 30-119 (170)
390 2r9u_A Variable lymphocyte rec 99.5 1.5E-13 5E-18 125.4 11.5 104 66-184 15-118 (174)
391 2r9u_A Variable lymphocyte rec 99.5 9.1E-14 3.1E-18 126.8 9.8 90 195-284 33-122 (174)
392 2vuw_A Serine/threonine-protei 99.5 3E-14 1E-18 144.9 6.2 104 392-511 133-278 (336)
393 4azs_A Methyltransferase WBDD; 99.4 1.5E-14 5E-19 157.1 0.6 107 390-509 311-437 (569)
394 3un9_A NLR family member X1; l 99.4 3.1E-15 1.1E-19 153.7 -6.7 169 35-215 72-259 (372)
395 4fs7_A Uncharacterized protein 99.3 2E-11 6.8E-16 126.9 18.2 277 6-300 66-376 (394)
396 3un9_A NLR family member X1; l 99.3 8.3E-15 2.8E-19 150.5 -8.1 79 130-208 108-196 (372)
397 2ifg_A High affinity nerve gro 99.3 3.8E-12 1.3E-16 130.0 10.5 104 67-185 12-117 (347)
398 2ifg_A High affinity nerve gro 99.3 5E-12 1.7E-16 129.1 11.2 106 14-138 11-118 (347)
399 4gt6_A Cell surface protein; l 99.2 3.6E-10 1.2E-14 117.4 19.1 260 6-278 58-368 (394)
400 4fs7_A Uncharacterized protein 99.2 3.1E-10 1.1E-14 117.8 15.2 226 24-277 151-376 (394)
401 4gt6_A Cell surface protein; l 99.1 1E-09 3.5E-14 113.9 17.9 257 6-279 82-390 (394)
402 2ra8_A Uncharacterized protein 98.9 6.6E-11 2.3E-15 120.4 -1.8 185 29-230 133-341 (362)
403 2ra8_A Uncharacterized protein 98.9 2E-10 6.7E-15 116.9 1.6 159 35-209 107-293 (362)
404 4h09_A Hypothetical leucine ri 98.9 5.8E-08 2E-12 100.0 20.2 82 7-97 42-123 (379)
405 3en9_A Glycoprotease, O-sialog 98.7 5.1E-10 1.7E-14 120.6 -3.1 111 392-511 410-539 (540)
406 4h09_A Hypothetical leucine ri 98.7 6.2E-07 2.1E-11 92.2 19.4 254 6-275 64-341 (379)
407 3rw6_A Nuclear RNA export fact 98.5 6.9E-09 2.4E-13 100.1 -1.6 107 31-153 137-257 (267)
408 1io0_A Tropomodulin; LRR prote 98.5 1.9E-08 6.6E-13 92.2 0.2 18 31-48 32-50 (185)
409 1io0_A Tropomodulin; LRR prote 98.4 1.8E-08 6.3E-13 92.3 -0.7 96 6-102 31-138 (185)
410 3rw6_A Nuclear RNA export fact 98.4 2.8E-08 9.6E-13 95.8 -0.7 63 145-209 168-234 (267)
411 3e4g_A ATP synthase subunit S, 98.0 9.2E-07 3.1E-11 79.0 0.3 83 12-97 62-149 (176)
412 3e4g_A ATP synthase subunit S, 97.7 7.9E-06 2.7E-10 72.9 0.8 30 88-117 62-91 (176)
413 1zar_A RIO2 kinase; serine kin 97.6 3.9E-05 1.3E-09 75.1 4.2 57 394-457 173-243 (282)
414 1pgv_A TMD-1, tropomodulin TMD 97.2 5.6E-05 1.9E-09 68.8 0.5 19 141-159 151-169 (197)
415 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00019 6.6E-09 65.2 1.9 66 142-207 93-169 (197)
416 3rfe_A Platelet glycoprotein I 96.7 0.0022 7.4E-08 54.3 5.7 36 64-99 32-67 (130)
417 3rfe_A Platelet glycoprotein I 96.4 0.0045 1.5E-07 52.4 5.9 50 66-117 11-61 (130)
418 1zth_A RIO1 serine protein kin 96.2 0.002 6.8E-08 61.9 2.9 22 434-457 199-220 (258)
419 4gyi_A RIO2 kinase; protein ki 89.0 0.19 6.5E-06 50.7 2.9 54 396-454 186-263 (397)
420 3sg8_A APH(2'')-ID; antibiotic 81.8 0.27 9.1E-06 48.0 -0.2 78 434-511 200-288 (304)
421 3tm0_A Aminoglycoside 3'-phosp 56.9 4.4 0.00015 38.0 2.1 21 434-454 192-212 (263)
422 3dxp_A Putative acyl-COA dehyd 54.7 11 0.00037 37.2 4.7 22 434-455 225-248 (359)
423 2yle_A Protein spire homolog 1 50.3 27 0.00093 31.7 6.0 25 486-510 112-136 (229)
424 4gkh_A Aminoglycoside 3'-phosp 45.8 8.3 0.00028 36.2 2.0 21 434-454 202-222 (272)
425 4ann_A ESSB; membrane protein, 44.2 42 0.0015 30.3 6.3 72 420-517 77-164 (215)
426 2lz0_A Uncharacterized protein 39.4 69 0.0024 24.8 6.2 48 21-73 6-53 (100)
427 2ks1_B Epidermal growth factor 37.5 24 0.00082 22.8 2.5 7 351-357 32-38 (44)
428 2lz0_A Uncharacterized protein 37.2 46 0.0016 25.8 4.8 39 237-276 14-52 (100)
429 3r70_A Aminoglycoside phosphot 33.2 23 0.00079 34.2 3.0 22 434-455 216-237 (320)
430 2l2t_A Receptor tyrosine-prote 28.8 28 0.00097 22.5 1.8 7 351-357 31-37 (44)
431 4ano_A ESSB; membrane protein, 25.0 84 0.0029 28.4 4.9 88 393-512 60-164 (219)
432 2jwa_A Receptor tyrosine-prote 22.7 30 0.001 22.3 1.0 7 351-357 32-38 (44)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.8e-42 Score=392.99 Aligned_cols=309 Identities=33% Similarity=0.478 Sum_probs=250.9
Q ss_pred CCCccccCCC-CCCeeeecCCcccccCCcCCCC--CCCCcEEecccccCcccCCcChhhhccccccccEEEccCCccccc
Q 046036 2 NVPQEIGNLF-RLQNLNFGNSTVQGEIPSHLSP--TSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGD 78 (614)
Q Consensus 2 ~ip~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~ 78 (614)
.+|..+.+++ +|+.|+|++|.+++.+|..+.. +++|++|+|++|++++.+|.. +.+++ +|++|+|++|++++.
T Consensus 358 ~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~---l~~l~-~L~~L~Ls~N~l~~~ 433 (768)
T 3rgz_A 358 ELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT---LSNCS-ELVSLHLSFNYLSGT 433 (768)
T ss_dssp CCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGG---GGGCT-TCCEEECCSSEEESC
T ss_pred cccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHH---HhcCC-CCCEEECcCCcccCc
Confidence 3444444444 4555555555555555554444 556666666666666666666 55665 777888888888777
Q ss_pred CCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccc--------cc----ccceEecCCCccccccchhhhcc
Q 046036 79 IPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLAT--------SL----YSFQLNLAENNLTGNIPESLENL 146 (614)
Q Consensus 79 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~--------~~----~l~~L~L~~N~l~~~~~~~~~~l 146 (614)
+|..+..+++|++|+|++|.+++.+|..++.+++|++|++..+ .+ +++.|+|++|++++.+|.+|+.+
T Consensus 434 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 513 (768)
T 3rgz_A 434 IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 513 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred ccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcC
Confidence 7777888888888888888888778888888888888876222 22 67788899999998899999999
Q ss_pred CCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccc-----------------------------------
Q 046036 147 TSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEV----------------------------------- 191 (614)
Q Consensus 147 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~----------------------------------- 191 (614)
++|++|+|++|++++.+|..+..+++|+.|++++|.++|.+|..+
T Consensus 514 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (768)
T 3rgz_A 514 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593 (768)
T ss_dssp TTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEE
T ss_pred CCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccc
Confidence 999999999999998899989999999999999998887777543
Q ss_pred -----------------------------------cCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCC
Q 046036 192 -----------------------------------GSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIP 236 (614)
Q Consensus 192 -----------------------------------~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 236 (614)
+.+++|+.|||++|+++|.+|..|+.+++|+.|+|++|.++|.+|
T Consensus 594 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip 673 (768)
T 3rgz_A 594 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673 (768)
T ss_dssp EECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred cccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCC
Confidence 335678899999999999999999999999999999999999999
Q ss_pred ccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCCcccCCCCccccccc
Q 046036 237 PFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGKLCGGVPELRLLSCA 316 (614)
Q Consensus 237 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~~~~~~~~~c~ 316 (614)
..++.+++|+.|||++|+++|.+|..+..+++|+.||+++|+++|.+|....+.++...++.|||++||.+. .+|.
T Consensus 674 ~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l----~~C~ 749 (768)
T 3rgz_A 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL----PRCD 749 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS----CCCC
T ss_pred hHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC----cCCC
Confidence 999999999999999999999999999999999999999999999999998899999899999999999642 3675
Q ss_pred cc
Q 046036 317 IE 318 (614)
Q Consensus 317 ~~ 318 (614)
..
T Consensus 750 ~~ 751 (768)
T 3rgz_A 750 PS 751 (768)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.3e-39 Score=369.42 Aligned_cols=307 Identities=35% Similarity=0.541 Sum_probs=244.8
Q ss_pred CCCCccccCCCCCCeeeecCCcccccCCcC-CCCCCCCcEEecccccCcccCCcChhhhc--------------------
Q 046036 1 GNVPQEIGNLFRLQNLNFGNSTVQGEIPSH-LSPTSKLTYLSLFSNNLHGIIPPSLDSFT-------------------- 59 (614)
Q Consensus 1 g~ip~~~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~~~-------------------- 59 (614)
|.+|..|+++++|++|+|++|.+++.+|.. |..+++|++|+|++|.+++.+|..+..+.
T Consensus 308 ~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~ 387 (768)
T 3rgz_A 308 GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387 (768)
T ss_dssp ECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTT
T ss_pred CccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChh
Confidence 356778888888888888888887777765 77788888888888888777777754432
Q ss_pred --c--ccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccc--------cccc----
Q 046036 60 --N--LSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPL--------ATSL---- 123 (614)
Q Consensus 60 --~--l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~--------~~~~---- 123 (614)
. ++ +|++|+|++|.+++.+|..+.++++|++|+|++|++++.+|..++.+++|+.|++. |..+
T Consensus 388 ~~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 466 (768)
T 3rgz_A 388 LCQNPKN-TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK 466 (768)
T ss_dssp TTCSTTC-CCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred hhhcccC-CccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCC
Confidence 1 33 57777777777777777778888888888888888888888888888888888762 2222
Q ss_pred ccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccC
Q 046036 124 YSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFS 203 (614)
Q Consensus 124 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls 203 (614)
+++.|+|++|++++.+|..|.++++|++|+|++|++++.+|..++.+++|++|+|++|++++.+|..++.+++|+.|+++
T Consensus 467 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 546 (768)
T 3rgz_A 467 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLN 546 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECC
T ss_pred CceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECC
Confidence 67888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CccCCCCccccc--------------------------------------------------------------------
Q 046036 204 EHMLSDEIPITL-------------------------------------------------------------------- 215 (614)
Q Consensus 204 ~N~l~~~~~~~~-------------------------------------------------------------------- 215 (614)
+|.+++.+|..+
T Consensus 547 ~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~ 626 (768)
T 3rgz_A 547 TNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP 626 (768)
T ss_dssp SSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCC
T ss_pred CCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCch
Confidence 888877666533
Q ss_pred --cCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCC-ccccCCC
Q 046036 216 --GNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPS-MSVFTNT 292 (614)
Q Consensus 216 --~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~l 292 (614)
+.+++|+.|+|++|+++|.+|..++.++.|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|. +..++.+
T Consensus 627 ~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L 706 (768)
T 3rgz_A 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 706 (768)
T ss_dssp SCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCC
T ss_pred hhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCC
Confidence 3356778888899999888898898899999999999999988999899999999999999999988875 4667888
Q ss_pred ceEEEecCCCcccCCCC
Q 046036 293 SVISIVGNGKLCGGVPE 309 (614)
Q Consensus 293 ~~~~~~~N~~~c~~~~~ 309 (614)
+.+++++|+ +.|.+|.
T Consensus 707 ~~L~ls~N~-l~g~iP~ 722 (768)
T 3rgz_A 707 TEIDLSNNN-LSGPIPE 722 (768)
T ss_dssp SEEECCSSE-EEEECCS
T ss_pred CEEECcCCc-ccccCCC
Confidence 888888886 5565553
No 3
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-36 Score=323.27 Aligned_cols=292 Identities=20% Similarity=0.195 Sum_probs=236.3
Q ss_pred CCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccC-CcChhhhccccccccEEEccCCcccccCCCCCcCCCCC
Q 046036 11 FRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGII-PPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNL 89 (614)
Q Consensus 11 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L 89 (614)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |.. |.+++ +|++|+|++|.+++..|..|.++++|
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~---~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L 105 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNT---FRGLS-SLIILKLDYNQFLQLETGAFNGLANL 105 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTT---TTTCT-TCCEEECTTCTTCEECTTTTTTCTTC
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECccc---ccccc-cCCEEeCCCCccCccChhhccCcccC
Confidence 68999999999999888999999999999999999987555 445 77787 89999999999988888899999999
Q ss_pred CEEeccCCcCcccCCcc--ccCCCCCCccccc--------ccc-c----ccceEecCCCccccccchhhhcc--------
Q 046036 90 IQLGLDRNCLAGSIPFS--IGKLQNLQKLNPL--------ATS-L----YSFQLNLAENNLTGNIPESLENL-------- 146 (614)
Q Consensus 90 ~~L~L~~N~l~~~~p~~--~~~l~~L~~L~l~--------~~~-~----~l~~L~L~~N~l~~~~~~~~~~l-------- 146 (614)
++|+|++|.+++..|.. |+.+++|++|++. +.. + ++++|+|++|++++..+..+..+
T Consensus 106 ~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L 185 (455)
T 3v47_A 106 EVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLL 185 (455)
T ss_dssp CEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEE
T ss_pred CEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccc
Confidence 99999999998765554 8889999988862 221 1 56677777777777666665544
Q ss_pred --------------------------CCCCeeecccccCCCCCCCCC---------------------------------
Q 046036 147 --------------------------TSLQILNLSCNHLGGSIPKPS--------------------------------- 167 (614)
Q Consensus 147 --------------------------~~L~~L~L~~N~l~~~~p~~~--------------------------------- 167 (614)
++|++|++++|++++..|..+
T Consensus 186 ~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 265 (455)
T 3v47_A 186 RLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPD 265 (455)
T ss_dssp ECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCC
T ss_pred ccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCc
Confidence 456666666665543222111
Q ss_pred ----C--CCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccC
Q 046036 168 ----G--LFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGS 241 (614)
Q Consensus 168 ----~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 241 (614)
. ..++|+.|++++|.+++..|..+..+++|++|++++|.+++..|..|..+++|+.|+|++|.+++..|..|..
T Consensus 266 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 345 (455)
T 3v47_A 266 NFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFEN 345 (455)
T ss_dssp TTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTT
T ss_pred ccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcC
Confidence 0 1257888888888888888888899999999999999999888889999999999999999998888888999
Q ss_pred CCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCc-cccCCCceEEEecCCCcccC
Q 046036 242 FKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSM-SVFTNTSVISIVGNGKLCGG 306 (614)
Q Consensus 242 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~l~~~~~~~N~~~c~~ 306 (614)
+++|+.|+|++|++++..|..|..+++|+.|++++|++++.++.. ..+++++.+++.+|++.|..
T Consensus 346 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred cccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 999999999999999888889999999999999999999876643 56788999999999988753
No 4
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.4e-37 Score=314.49 Aligned_cols=255 Identities=30% Similarity=0.505 Sum_probs=232.7
Q ss_pred CCCcEEecccccCcc--cCCcChhhhccccccccEEEccC-CcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCC
Q 046036 35 SKLTYLSLFSNNLHG--IIPPSLDSFTNLSTKLRILDAGG-NQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQ 111 (614)
Q Consensus 35 ~~L~~L~L~~N~l~~--~~p~~~~~~~~l~~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 111 (614)
.+++.|+|++|.+++ .+|.. +.+++ +|++|+|++ |.+++.+|..|.++++|++|+|++|.+++.+|..|.+++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~---l~~l~-~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 125 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSS---LANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIK 125 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGG---GGGCT-TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCT
T ss_pred ceEEEEECCCCCccCCcccChh---HhCCC-CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCC
Confidence 578999999999998 78887 67777 899999995 888888998999999999999999999988999999999
Q ss_pred CCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCC-CCCEEEcCCCCCccCCccc
Q 046036 112 NLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFS-TLSSIDFAHNNFNGSLPLE 190 (614)
Q Consensus 112 ~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~ 190 (614)
+|++|+ |++|.+++.+|..|..+++|++|+|++|++++.+|..+..++ +|++|++++|.+++.+|..
T Consensus 126 ~L~~L~------------Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~ 193 (313)
T 1ogq_A 126 TLVTLD------------FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT 193 (313)
T ss_dssp TCCEEE------------CCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGG
T ss_pred CCCEEe------------CCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChH
Confidence 998887 999999988999999999999999999999888898888887 8999999999999999999
Q ss_pred ccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCC
Q 046036 191 VGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLE 270 (614)
Q Consensus 191 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 270 (614)
+..+. |+.|++++|.+++..|..|..+++|+.|+|++|.+++.+|. +..+++|++|+|++|++++.+|..+..+++|+
T Consensus 194 ~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 271 (313)
T 1ogq_A 194 FANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH 271 (313)
T ss_dssp GGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCC
T ss_pred HhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCC
Confidence 98887 99999999999988999999999999999999999876665 88899999999999999999999999999999
Q ss_pred EEECcCCcCcccCCCccccCCCceEEEecCCCcccCC
Q 046036 271 NLNLSFNNFEGQLPSMSVFTNTSVISIVGNGKLCGGV 307 (614)
Q Consensus 271 ~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~~ 307 (614)
.|++++|++++.+|....++++..+++.+|+++||.+
T Consensus 272 ~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 272 SLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp EEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred EEECcCCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 9999999999999998889999999999999999964
No 5
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=323.51 Aligned_cols=298 Identities=20% Similarity=0.189 Sum_probs=260.7
Q ss_pred CCCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 2 NVPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 2 ~ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
.||..+ .++++.|+|++|++++..|..|.++++|++|+|++|.+++..|.. |.+++ +|++|+|++|++++..+.
T Consensus 25 ~ip~~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~---~~~l~-~L~~L~L~~n~l~~~~~~ 98 (477)
T 2id5_A 25 AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGA---FNNLF-NLRTLGLRSNRLKLIPLG 98 (477)
T ss_dssp SCCSCC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTT---TTTCT-TCCEEECCSSCCCSCCTT
T ss_pred cCCCCC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhh---hhCCc-cCCEEECCCCcCCccCcc
Confidence 366655 358899999999999888888999999999999999998887877 67777 889999999999866666
Q ss_pred CCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc------------ccceEecCCCccccccchhhhccCCC
Q 046036 82 GIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL------------YSFQLNLAENNLTGNIPESLENLTSL 149 (614)
Q Consensus 82 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~------------~l~~L~L~~N~l~~~~~~~~~~l~~L 149 (614)
.|.++++|++|+|++|.+++..|..|..+++|+.|++..+.+ +|+.|+|++|++++..+..|..+++|
T Consensus 99 ~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 178 (477)
T 2id5_A 99 VFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGL 178 (477)
T ss_dssp SSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTC
T ss_pred cccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCC
Confidence 788899999999999999888888889999999888733222 67888899999998777889999999
Q ss_pred CeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCc
Q 046036 150 QILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGN 229 (614)
Q Consensus 150 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N 229 (614)
+.|+|++|.+.+..+..+..+++|+.|++++|.+.+.+|..+....+|+.|++++|.+++..+..|..+++|+.|+|++|
T Consensus 179 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 258 (477)
T 2id5_A 179 IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYN 258 (477)
T ss_dssp CEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSS
T ss_pred cEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCC
Confidence 99999999999888888999999999999999988888887777789999999999999776678999999999999999
Q ss_pred cccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCC-ccccCCCceEEEecCCCccc
Q 046036 230 MFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPS-MSVFTNTSVISIVGNGKLCG 305 (614)
Q Consensus 230 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~l~~~~~~~N~~~c~ 305 (614)
.+++..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|++++..+. +..+++++.+++.+|++.|.
T Consensus 259 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 259 PISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred cCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 99988888899999999999999999999999999999999999999999987664 35678899999999999885
No 6
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.8e-36 Score=317.82 Aligned_cols=281 Identities=19% Similarity=0.188 Sum_probs=244.4
Q ss_pred CCccccCCCCCCeeeecCCccccc-CCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 3 VPQEIGNLFRLQNLNFGNSTVQGE-IPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 3 ip~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
.|..|+++++|++|+|++|.+.+. .+..|.++++|++|+|++|++++..|.. |.+++ +|++|+|++|++++..|.
T Consensus 46 ~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~---~~~l~-~L~~L~L~~n~l~~~~~~ 121 (455)
T 3v47_A 46 NETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGA---FNGLA-NLEVLTLTQCNLDGAVLS 121 (455)
T ss_dssp CTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTT---TTTCT-TCCEEECTTSCCBTHHHH
T ss_pred ChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhh---ccCcc-cCCEEeCCCCCCCccccC
Confidence 367788899999999999988744 4677889999999999999998888887 66776 888999999988865444
Q ss_pred C--CcCCCCCCEEeccCCcCcccCCcc-ccCCCCCCcccccccc------------------------------------
Q 046036 82 G--IPKYFNLIQLGLDRNCLAGSIPFS-IGKLQNLQKLNPLATS------------------------------------ 122 (614)
Q Consensus 82 ~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~l~~~~------------------------------------ 122 (614)
. |..+++|++|+|++|.+++..|.. ++++++|++|++..+.
T Consensus 122 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~ 201 (455)
T 3v47_A 122 GNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLG 201 (455)
T ss_dssp SSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTT
T ss_pred cccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcc
Confidence 3 888889999999999988777766 7888888888872221
Q ss_pred ----------cccceEecCCCccccccchhhhcc---------------------------------------CCCCeee
Q 046036 123 ----------LYSFQLNLAENNLTGNIPESLENL---------------------------------------TSLQILN 153 (614)
Q Consensus 123 ----------~~l~~L~L~~N~l~~~~~~~~~~l---------------------------------------~~L~~L~ 153 (614)
.+++.|++++|++++..|..+..+ ++|++|+
T Consensus 202 ~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ 281 (455)
T 3v47_A 202 WEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCD 281 (455)
T ss_dssp HHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEE
T ss_pred ccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEE
Confidence 147889999999987777666443 6899999
Q ss_pred cccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccc
Q 046036 154 LSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQG 233 (614)
Q Consensus 154 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 233 (614)
+++|.+.+..|..+..+++|++|++++|.+++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++
T Consensus 282 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 361 (455)
T 3v47_A 282 LSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA 361 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCE
T ss_pred ecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccc
Confidence 99999998899999999999999999999999889999999999999999999999889999999999999999999998
Q ss_pred cCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCcc
Q 046036 234 RIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMS 287 (614)
Q Consensus 234 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 287 (614)
..|..|..+++|++|+|++|++++..+..+..+++|+.|++++|++++.+|...
T Consensus 362 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 362 LGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred cChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 889999999999999999999998877888999999999999999999998643
No 7
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-36 Score=307.78 Aligned_cols=253 Identities=29% Similarity=0.460 Sum_probs=239.4
Q ss_pred CCCCeeeecCCcccc--cCCcCCCCCCCCcEEeccc-ccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCC
Q 046036 11 FRLQNLNFGNSTVQG--EIPSHLSPTSKLTYLSLFS-NNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYF 87 (614)
Q Consensus 11 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~ 87 (614)
.+++.|+|++|.+++ .+|..|+++++|++|+|++ |.+.+.+|.. |.+++ +|++|+|++|++++.+|..|.+++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~---l~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~ 125 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA---IAKLT-QLHYLYITHTNVSGAIPDFLSQIK 125 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGG---GGGCT-TCSEEEEEEECCEEECCGGGGGCT
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChh---HhcCC-CCCEEECcCCeeCCcCCHHHhCCC
Confidence 579999999999999 8999999999999999995 9999999998 77787 999999999999999999999999
Q ss_pred CCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccC-CCCeeecccccCCCCCCCC
Q 046036 88 NLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLT-SLQILNLSCNHLGGSIPKP 166 (614)
Q Consensus 88 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~ 166 (614)
+|++|+|++|.+++.+|..++.+++|++|+ |++|++++.+|..+..++ +|++|+|++|++++.+|..
T Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~------------L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~ 193 (313)
T 1ogq_A 126 TLVTLDFSYNALSGTLPPSISSLPNLVGIT------------FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT 193 (313)
T ss_dssp TCCEEECCSSEEESCCCGGGGGCTTCCEEE------------CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGG
T ss_pred CCCEEeCCCCccCCcCChHHhcCCCCCeEE------------CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChH
Confidence 999999999999999999999999999888 999999999999999998 9999999999999999999
Q ss_pred CCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccc
Q 046036 167 SGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTI 246 (614)
Q Consensus 167 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 246 (614)
+..++ |++|++++|.+++..|..|..+++|+.|++++|.+++..|. +..+++|++|+|++|.+++.+|.++..+++|+
T Consensus 194 ~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 271 (313)
T 1ogq_A 194 FANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH 271 (313)
T ss_dssp GGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCC
T ss_pred HhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCC
Confidence 99887 99999999999999999999999999999999999977766 88899999999999999999999999999999
Q ss_pred eEEccCCcCcccCCcccCCCCCCCEEECcCCc-Cccc
Q 046036 247 DLNLSHNNLSGTIPKELETLPFLENLNLSFNN-FEGQ 282 (614)
Q Consensus 247 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~~~ 282 (614)
.|+|++|++++.+|.. ..+++|+.+++++|+ +.|.
T Consensus 272 ~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 272 SLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp EEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred EEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 9999999999999986 889999999999998 5553
No 8
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2e-35 Score=327.65 Aligned_cols=294 Identities=19% Similarity=0.250 Sum_probs=230.8
Q ss_pred CCcccc--CCCCCCeeeecCCcccccCCcCCCCCCCCcEEeccccc-Ccc-cCCcChhhh---ccccccccEEEccCCcc
Q 046036 3 VPQEIG--NLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNN-LHG-IIPPSLDSF---TNLSTKLRILDAGGNQF 75 (614)
Q Consensus 3 ip~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~~---~~l~~~L~~L~L~~N~l 75 (614)
+|++++ ++++|++|+|++|.+.+.+|+.|+++++|++|+|++|+ +++ .+|..++.+ ..++ +|++|+|++|++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~-~L~~L~L~~n~l 317 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGE-KIQIIYIGYNNL 317 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGG-TCCEEECCSSCC
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCC-CCCEEECCCCcC
Confidence 999999 99999999999999999999999999999999999998 998 889885443 2346 999999999999
Q ss_pred cccCCC--CCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccc-------cccc----c-cceEecCCCccccccch
Q 046036 76 AGDIPA--GIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPL-------ATSL----Y-SFQLNLAENNLTGNIPE 141 (614)
Q Consensus 76 ~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~-------~~~~----~-l~~L~L~~N~l~~~~~~ 141 (614)
+ .+|. .++++++|++|+|++|+++|.+| .|+.+++|++|++. |..+ + ++.|+|++|.++ .+|.
T Consensus 318 ~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~ 394 (636)
T 4eco_A 318 K-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPN 394 (636)
T ss_dssp S-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCS
T ss_pred C-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccch
Confidence 9 8998 89999999999999999999999 99999999999873 3333 4 888888888888 6777
Q ss_pred hhhccC--CCCeeecccccCCCCCCCCCC-------CCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCcc
Q 046036 142 SLENLT--SLQILNLSCNHLGGSIPKPSG-------LFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIP 212 (614)
Q Consensus 142 ~~~~l~--~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~ 212 (614)
.+..++ +|++|++++|.+++.+|..+. .+++|++|+|++|.++...+..+..+++|+.|+|++|.++...+
T Consensus 395 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~ 474 (636)
T 4eco_A 395 IFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPK 474 (636)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCS
T ss_pred hhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCH
Confidence 776654 788888888888887777777 67788888888888874333334557778888888887773333
Q ss_pred ccccCc-------ccchHHhccCccccccCCcccc--CCCccceEEccCCcCcccCCcccCCCCCCCEEEC------cCC
Q 046036 213 ITLGNR-------SKFEHLLLGGNMFQGRIPPFFG--SFKGTIDLNLSHNNLSGTIPKELETLPFLENLNL------SFN 277 (614)
Q Consensus 213 ~~~~~l-------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l------s~N 277 (614)
..+... ++|+.|+|++|.++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|++ ++|
T Consensus 475 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N 552 (636)
T 4eco_A 475 NSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGN 552 (636)
T ss_dssp SSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCC
T ss_pred HHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccC
Confidence 333322 27777777777777 5666665 77777777777777776 6777777777777777 446
Q ss_pred cCcccCC-CccccCCCceEEEecCCC
Q 046036 278 NFEGQLP-SMSVFTNTSVISIVGNGK 302 (614)
Q Consensus 278 ~l~~~~p-~~~~~~~l~~~~~~~N~~ 302 (614)
++.+.+| .+..+++++.+++.+|..
T Consensus 553 ~l~~~~p~~l~~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 553 RTLREWPEGITLCPSLTQLQIGSNDI 578 (636)
T ss_dssp BCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred cccccChHHHhcCCCCCEEECCCCcC
Confidence 6666665 355667777777777765
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=8.4e-35 Score=322.15 Aligned_cols=179 Identities=23% Similarity=0.179 Sum_probs=91.3
Q ss_pred cceEecCCCccccc--cchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCc-ccccCCCCCceec
Q 046036 125 SFQLNLAENNLTGN--IPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLP-LEVGSLSNTQELD 201 (614)
Q Consensus 125 l~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~ 201 (614)
+++|++++|.+++. .|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|.+++..| ..+..+++|++|+
T Consensus 352 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 430 (606)
T 3vq2_A 352 LSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLD 430 (606)
T ss_dssp CCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEE
T ss_pred CCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEE
Confidence 34455555555543 25555666666666666665552 34445555555555555555554444 3444445555555
Q ss_pred cCCccCCCCccc-------------------------cccCcccchHHhccCccccccCCccccCCCccceEEccCCcCc
Q 046036 202 FSEHMLSDEIPI-------------------------TLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLS 256 (614)
Q Consensus 202 ls~N~l~~~~~~-------------------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 256 (614)
+++|.+++..|. .|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|+++
T Consensus 431 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 510 (606)
T 3vq2_A 431 ISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLL 510 (606)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCC
Confidence 555554444444 4445555555555555555444444555555555555555555
Q ss_pred ccCCcccCCCCCCCEEECcCCcCcccCCCccccC-CCceEEEecCCCcc
Q 046036 257 GTIPKELETLPFLENLNLSFNNFEGQLPSMSVFT-NTSVISIVGNGKLC 304 (614)
Q Consensus 257 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~-~l~~~~~~~N~~~c 304 (614)
+..|..+..+++|+.|++++|+++..++.+..++ +++.+++.+||+.|
T Consensus 511 ~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 511 FLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp CEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCC
T ss_pred CcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCccc
Confidence 4445555555555555555555554333333333 35555555555555
No 10
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.5e-35 Score=328.65 Aligned_cols=290 Identities=22% Similarity=0.311 Sum_probs=242.1
Q ss_pred CCccccCCCCCCeeeecCCccccc-----------------CCcCCC--CCCCCcEEecccccCcccCCcChhhhccccc
Q 046036 3 VPQEIGNLFRLQNLNFGNSTVQGE-----------------IPSHLS--PTSKLTYLSLFSNNLHGIIPPSLDSFTNLST 63 (614)
Q Consensus 3 ip~~~~~l~~L~~L~L~~n~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~ 63 (614)
||++|+++++|++|+|++|.+++. +|+.++ ++++|++|+|++|++.+.+|.. +.+++
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~---l~~l~- 273 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTF---LKALP- 273 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTT---TTTCS-
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHH---HhcCC-
Confidence 899999999999999999999986 999999 9999999999999999999988 77887
Q ss_pred cccEEEccCCc-ccc-cCCCCCcCC------CCCCEEeccCCcCcccCCc--cccCCCCCCcccccccc-------c---
Q 046036 64 KLRILDAGGNQ-FAG-DIPAGIPKY------FNLIQLGLDRNCLAGSIPF--SIGKLQNLQKLNPLATS-------L--- 123 (614)
Q Consensus 64 ~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~l~~~~-------~--- 123 (614)
+|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .++++++|++|++..+. +
T Consensus 274 ~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l 352 (636)
T 4eco_A 274 EMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSE 352 (636)
T ss_dssp SCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEE
T ss_pred CCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCC
Confidence 99999999998 998 899888776 99999999999999 8898 99999999999973222 2
Q ss_pred -ccceEecCCCccccccchhhhccCC-CCeeecccccCCCCCCCCCCCCC--CCCEEEcCCCCCccCCccccc-------
Q 046036 124 -YSFQLNLAENNLTGNIPESLENLTS-LQILNLSCNHLGGSIPKPSGLFS--TLSSIDFAHNNFNGSLPLEVG------- 192 (614)
Q Consensus 124 -~l~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~------- 192 (614)
+++.|+|++|+++ .+|..|..+++ |++|+|++|.++ .+|..+..++ +|++|++++|.+++.+|..+.
T Consensus 353 ~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~ 430 (636)
T 4eco_A 353 IKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPF 430 (636)
T ss_dssp EEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCC
T ss_pred CCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccc
Confidence 6778888888888 77778888888 888888888888 7777776654 788888888888888887777
Q ss_pred CCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCc-cccCCC-------ccceEEccCCcCcccCCcccC
Q 046036 193 SLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPP-FFGSFK-------GTIDLNLSHNNLSGTIPKELE 264 (614)
Q Consensus 193 ~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~ 264 (614)
.+.+|+.|+|++|.++...+..+..+++|+.|+|++|.++ .+|. .+.... +|+.|+|++|+++ .+|..+.
T Consensus 431 ~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 508 (636)
T 4eco_A 431 KGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFR 508 (636)
T ss_dssp CCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGS
T ss_pred cCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhh
Confidence 7778888888888888554455666888888888888888 4444 333332 8888888888888 6777776
Q ss_pred --CCCCCCEEECcCCcCcccCCCccccCCCceEEEecCC
Q 046036 265 --TLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNG 301 (614)
Q Consensus 265 --~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~ 301 (614)
.+++|+.|++++|++++.++....+++++.+++.+|.
T Consensus 509 ~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~ 547 (636)
T 4eco_A 509 ATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQR 547 (636)
T ss_dssp TTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCB
T ss_pred hccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCc
Confidence 8888888888888888854556778888888887654
No 11
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.2e-34 Score=321.01 Aligned_cols=281 Identities=23% Similarity=0.275 Sum_probs=210.8
Q ss_pred ccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCC-CcC
Q 046036 7 IGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAG-IPK 85 (614)
Q Consensus 7 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~-~~~ 85 (614)
|+++++|++|+|++|.++ .+|..+..+++|++|++++|.+++..|.. +.+++ +|++|++++|.+.+.+|.. +..
T Consensus 274 ~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~---~~~l~-~L~~L~l~~n~~~~~~~~~~~~~ 348 (606)
T 3t6q_A 274 FHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQIS---ASNFP-SLTHLSIKGNTKRLELGTGCLEN 348 (606)
T ss_dssp TTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGC---GGGCT-TCSEEECCSCSSCCBCCSSTTTT
T ss_pred hccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhh---hhccC-cCCEEECCCCCcccccchhhhhc
Confidence 444445555555555444 34444444455555555555544443433 33343 4445555555444333322 444
Q ss_pred CCCCCEEeccCCcCcccC--CccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCC
Q 046036 86 YFNLIQLGLDRNCLAGSI--PFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSI 163 (614)
Q Consensus 86 l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 163 (614)
+++|++|++++|.+++.. +..++.+++|+ .|++++|++++..|..|..+++|++|++++|++.+..
T Consensus 349 l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~------------~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 416 (606)
T 3t6q_A 349 LENLRELDLSHDDIETSDCCNLQLRNLSHLQ------------SLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKD 416 (606)
T ss_dssp CTTCCEEECCSSCCCEEEESTTTTTTCTTCC------------EEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCT
T ss_pred cCcCCEEECCCCccccccCcchhcccCCCCC------------EEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcc
Confidence 455555555555544333 34444444444 5559999999999999999999999999999998776
Q ss_pred CCC-CCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCC---ccccccCcccchHHhccCccccccCCccc
Q 046036 164 PKP-SGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDE---IPITLGNRSKFEHLLLGGNMFQGRIPPFF 239 (614)
Q Consensus 164 p~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 239 (614)
+.. +..+++|++|++++|.+++..|..+..+++|++|++++|.+++. .+..+..+++|+.|+|++|.+++..|..|
T Consensus 417 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 496 (606)
T 3t6q_A 417 AQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAF 496 (606)
T ss_dssp TCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTT
T ss_pred cchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhh
Confidence 554 88999999999999999998999999999999999999999873 33678899999999999999999989999
Q ss_pred cCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCC-ccccCCCceEEEecCCCccc
Q 046036 240 GSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPS-MSVFTNTSVISIVGNGKLCG 305 (614)
Q Consensus 240 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~l~~~~~~~N~~~c~ 305 (614)
..+++|+.|+|++|++++..|..+..+++| .|++++|++++.+|. +..+++++.+++.+||+.|.
T Consensus 497 ~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 497 TSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp TTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred ccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 999999999999999999999999999999 999999999988776 46688999999999999884
No 12
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.4e-35 Score=316.96 Aligned_cols=290 Identities=20% Similarity=0.234 Sum_probs=199.9
Q ss_pred CCCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 2 NVPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 2 ~ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
.||..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|.. |.+++ +|++|+|++|+++ .+|.
T Consensus 14 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~---~~~l~-~L~~L~Ls~N~l~-~lp~ 86 (520)
T 2z7x_B 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISV---FKFNQ-ELEYLDLSHNKLV-KISC 86 (520)
T ss_dssp SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGG---GTTCT-TCCEEECCSSCCC-EEEC
T ss_pred ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHH---hhccc-CCCEEecCCCcee-ecCc
Confidence 3666665 77888888888888777777888888888888888888766766 66666 7888888888887 4555
Q ss_pred CCcCCCCCCEEeccCCcCcc-cCCccccCCCCCCccccccccc---------cc--ceEecCCCcc--ccccchhhhccC
Q 046036 82 GIPKYFNLIQLGLDRNCLAG-SIPFSIGKLQNLQKLNPLATSL---------YS--FQLNLAENNL--TGNIPESLENLT 147 (614)
Q Consensus 82 ~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~~~~---------~l--~~L~L~~N~l--~~~~~~~~~~l~ 147 (614)
. .+++|++|+|++|.+++ .+|..|+++++|++|++..+.+ ++ +.|++++|.+ .+..|..|..+.
T Consensus 87 ~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 87 H--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp C--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred c--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccccccccccc
Confidence 4 67788888888888876 3677778888888777633322 33 6666666666 444444444322
Q ss_pred --------------------------------------------------------------------------------
Q 046036 148 -------------------------------------------------------------------------------- 147 (614)
Q Consensus 148 -------------------------------------------------------------------------------- 147 (614)
T Consensus 165 ~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~ 244 (520)
T 2z7x_B 165 TESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLV 244 (520)
T ss_dssp EEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHH
T ss_pred cceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHh
Confidence
Q ss_pred ---CCCeeecccccCCCCCCCCC-----------------------------------------------------CCCC
Q 046036 148 ---SLQILNLSCNHLGGSIPKPS-----------------------------------------------------GLFS 171 (614)
Q Consensus 148 ---~L~~L~L~~N~l~~~~p~~~-----------------------------------------------------~~l~ 171 (614)
+|++|++++|++++.+|..+ ..++
T Consensus 245 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~ 324 (520)
T 2z7x_B 245 WHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKIS 324 (520)
T ss_dssp HTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred hhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCC
Confidence 55666666666665555443 4567
Q ss_pred CCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCC--CccccccCcccchHHhccCccccccCCc-cccCCCccceE
Q 046036 172 TLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSD--EIPITLGNRSKFEHLLLGGNMFQGRIPP-FFGSFKGTIDL 248 (614)
Q Consensus 172 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L 248 (614)
+|++|++++|.+++.+|..++.+++|++|++++|++++ .+|..+..+++|++|++++|.+++.+|. .+..+++|+.|
T Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L 404 (520)
T 2z7x_B 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSL 404 (520)
T ss_dssp CCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEE
T ss_pred cccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEE
Confidence 77788888888877777777777888888888887776 4456677777788888888877764554 36667777777
Q ss_pred EccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCC
Q 046036 249 NLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGK 302 (614)
Q Consensus 249 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~ 302 (614)
++++|++++..|..+. ++|+.|++++|+++..++....+++++.+++.+|..
T Consensus 405 ~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l 456 (520)
T 2z7x_B 405 NMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQL 456 (520)
T ss_dssp ECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred ECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcC
Confidence 7777777766665543 567777777777764444455666677777777653
No 13
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.9e-34 Score=316.08 Aligned_cols=289 Identities=21% Similarity=0.209 Sum_probs=191.8
Q ss_pred CCCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 2 NVPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 2 ~ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
.||..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|.. |.+++ +|++|+|++|+++ .+|.
T Consensus 45 ~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~l~-~L~~L~Ls~N~l~-~lp~ 117 (562)
T 3a79_B 45 HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHV---FLFNQ-DLEYLDVSHNRLQ-NISC 117 (562)
T ss_dssp SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTT---TTTCT-TCCEEECTTSCCC-EECS
T ss_pred cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHH---hCCCC-CCCEEECCCCcCC-ccCc
Confidence 3666553 78888888888888777788888888888888888888777777 66676 8888888888887 5665
Q ss_pred CCcCCCCCCEEeccCCcCccc-CCccccCCCCCCccccccccc---------cc--ceEecCCCcc--ccccchhhhccC
Q 046036 82 GIPKYFNLIQLGLDRNCLAGS-IPFSIGKLQNLQKLNPLATSL---------YS--FQLNLAENNL--TGNIPESLENLT 147 (614)
Q Consensus 82 ~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~~~~---------~l--~~L~L~~N~l--~~~~~~~~~~l~ 147 (614)
. .+++|++|+|++|++++. +|..|+++++|++|++..+.+ .+ +.|+|++|.+ ++..|..|..+.
T Consensus 118 ~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 118 C--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp C--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECC
T ss_pred c--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccC
Confidence 5 788888888888888763 457888888888887733332 23 6677777766 444444443322
Q ss_pred --------------------------------------------------------------------------------
Q 046036 148 -------------------------------------------------------------------------------- 147 (614)
Q Consensus 148 -------------------------------------------------------------------------------- 147 (614)
T Consensus 196 ~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~ 275 (562)
T 3a79_B 196 TTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWP 275 (562)
T ss_dssp EEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTT
T ss_pred cceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhc
Confidence
Q ss_pred -CCCeeecccccCCCCCCCCC-----------------------------------------------------CCCCCC
Q 046036 148 -SLQILNLSCNHLGGSIPKPS-----------------------------------------------------GLFSTL 173 (614)
Q Consensus 148 -~L~~L~L~~N~l~~~~p~~~-----------------------------------------------------~~l~~L 173 (614)
+|++|++++|.+++.+|..+ ..+++|
T Consensus 276 ~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L 355 (562)
T 3a79_B 276 RPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSF 355 (562)
T ss_dssp SSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCC
T ss_pred ccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCc
Confidence 55666666666665555544 455667
Q ss_pred CEEEcCCCCCccCCcccccCCCCCceeccCCccCCCC--ccccccCcccchHHhccCccccccCCc-cccCCCccceEEc
Q 046036 174 SSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDE--IPITLGNRSKFEHLLLGGNMFQGRIPP-FFGSFKGTIDLNL 250 (614)
Q Consensus 174 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L 250 (614)
++|++++|.+++.+|..+..+++|+.|++++|++++. .|..|..+++|+.|++++|.+++.+|. .+..+++|+.|++
T Consensus 356 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l 435 (562)
T 3a79_B 356 TFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNL 435 (562)
T ss_dssp CEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEEC
T ss_pred eEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEEC
Confidence 7777777777766666677777777777777777653 245566677777777777777653333 4556666666666
Q ss_pred cCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCC
Q 046036 251 SHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNG 301 (614)
Q Consensus 251 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~ 301 (614)
++|++++.+|..+. ++|+.|++++|+++..++....+++++.+++.+|.
T Consensus 436 ~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~ 484 (562)
T 3a79_B 436 SSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQ 484 (562)
T ss_dssp CSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSC
T ss_pred CCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCC
Confidence 66666655444332 45666666666665444444455555566665554
No 14
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-35 Score=314.75 Aligned_cols=301 Identities=22% Similarity=0.176 Sum_probs=270.5
Q ss_pred CccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCC
Q 046036 4 PQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGI 83 (614)
Q Consensus 4 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~ 83 (614)
|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+.. |.+++ +|++|+|++|.+++..|..|
T Consensus 49 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~l~-~L~~L~Ls~n~i~~~~~~~~ 124 (477)
T 2id5_A 49 QDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGV---FTGLS-NLTKLDISENKIVILLDYMF 124 (477)
T ss_dssp TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTS---STTCT-TCCEEECTTSCCCEECTTTT
T ss_pred HhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCccc---ccCCC-CCCEEECCCCccccCChhHc
Confidence 568999999999999999999999999999999999999999999665555 67787 99999999999998889999
Q ss_pred cCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc------------ccceEecCCCccccccchhhhccCCCCe
Q 046036 84 PKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL------------YSFQLNLAENNLTGNIPESLENLTSLQI 151 (614)
Q Consensus 84 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~------------~l~~L~L~~N~l~~~~~~~~~~l~~L~~ 151 (614)
..+++|++|+|++|.+++..+..|.++++|+.|++..+.+ +++.|+|++|.+++..+..|..+++|++
T Consensus 125 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~ 204 (477)
T 2id5_A 125 QDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKV 204 (477)
T ss_dssp TTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCE
T ss_pred cccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccce
Confidence 9999999999999999999999999999999999843332 7899999999999988889999999999
Q ss_pred eecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccc
Q 046036 152 LNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMF 231 (614)
Q Consensus 152 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 231 (614)
|++++|.+.+.+|.......+|++|++++|.++...+..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++
T Consensus 205 L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 284 (477)
T 2id5_A 205 LEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 284 (477)
T ss_dssp EEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCC
T ss_pred eeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCcc
Confidence 99999998888888877778999999999999966557899999999999999999998888999999999999999999
Q ss_pred cccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCCcccCCC
Q 046036 232 QGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGKLCGGVP 308 (614)
Q Consensus 232 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~~~ 308 (614)
++..|..|..+++|+.|+|++|++++..+..|..+++|+.|++++|++++..+..+.+.......+.++...|..+.
T Consensus 285 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 285 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp SEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred ceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 99999999999999999999999998888889999999999999999998766555444444456677777886543
No 15
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.4e-34 Score=323.43 Aligned_cols=296 Identities=19% Similarity=0.240 Sum_probs=241.7
Q ss_pred CCCcccc--CCCCCCeeeecCCcccccCCcCCCCCCCCcEEeccccc-Ccc-cCCcChhhhc----cccccccEEEccCC
Q 046036 2 NVPQEIG--NLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNN-LHG-IIPPSLDSFT----NLSTKLRILDAGGN 73 (614)
Q Consensus 2 ~ip~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~~~----~l~~~L~~L~L~~N 73 (614)
.||++++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++.+. .++ +|++|+|++|
T Consensus 480 ~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~-~L~~L~Ls~N 558 (876)
T 4ecn_A 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGP-KIQIFYMGYN 558 (876)
T ss_dssp HTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTT-TCCEEECCSS
T ss_pred cCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccC-CccEEEeeCC
Confidence 4899988 99999999999999999999999999999999999998 998 8888765543 555 8999999999
Q ss_pred cccccCCC--CCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccc-------cc----c-cceEecCCCcccccc
Q 046036 74 QFAGDIPA--GIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLAT-------SL----Y-SFQLNLAENNLTGNI 139 (614)
Q Consensus 74 ~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~-------~~----~-l~~L~L~~N~l~~~~ 139 (614)
+++ .+|. .|.++++|++|+|++|+++ .+| .|+.+++|+.|++..+ .+ + |+.|+|++|+++ .+
T Consensus 559 ~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~l 634 (876)
T 4ecn_A 559 NLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YI 634 (876)
T ss_dssp CCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SC
T ss_pred cCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cC
Confidence 999 8898 8999999999999999999 888 8999999999998332 23 5 889999999998 77
Q ss_pred chhhhccCC--CCeeecccccCCCCCCCCC---C--CCCCCCEEEcCCCCCccCCcccc-cCCCCCceeccCCccCCCCc
Q 046036 140 PESLENLTS--LQILNLSCNHLGGSIPKPS---G--LFSTLSSIDFAHNNFNGSLPLEV-GSLSNTQELDFSEHMLSDEI 211 (614)
Q Consensus 140 ~~~~~~l~~--L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~ls~N~l~~~~ 211 (614)
|..+..++. |+.|+|++|++.+.+|... . .+++|+.|+|++|.|+ .+|..+ ..+++|+.|+|++|.++. +
T Consensus 635 p~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~-i 712 (876)
T 4ecn_A 635 PNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTS-I 712 (876)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSC-C
T ss_pred chhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCc-c
Confidence 877777654 9999999999987665322 2 3347888889988888 555544 478889999999998884 4
Q ss_pred cccc-c-------CcccchHHhccCccccccCCcccc--CCCccceEEccCCcCcccCCcccCCCCCCCEEECcC-----
Q 046036 212 PITL-G-------NRSKFEHLLLGGNMFQGRIPPFFG--SFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSF----- 276 (614)
Q Consensus 212 ~~~~-~-------~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~----- 276 (614)
|..+ . ++++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++
T Consensus 713 p~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls 790 (876)
T 4ecn_A 713 PENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAE 790 (876)
T ss_dssp CTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTT
T ss_pred ChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcc
Confidence 4433 2 2338888899999888 6777776 88889999999999886 687888888899998876
Q ss_pred -CcCcccCC-CccccCCCceEEEecCCCcccCCC
Q 046036 277 -NNFEGQLP-SMSVFTNTSVISIVGNGKLCGGVP 308 (614)
Q Consensus 277 -N~l~~~~p-~~~~~~~l~~~~~~~N~~~c~~~~ 308 (614)
|++.+.+| .+..+++++.+++.+|.. +.+|
T Consensus 791 ~N~l~~~ip~~l~~L~~L~~L~Ls~N~L--~~Ip 822 (876)
T 4ecn_A 791 GNRILRQWPTGITTCPSLIQLQIGSNDI--RKVD 822 (876)
T ss_dssp CCBCCCCCCTTGGGCSSCCEEECCSSCC--CBCC
T ss_pred cccccccChHHHhcCCCCCEEECCCCCC--CccC
Confidence 77777776 456688888888888875 4444
No 16
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2e-33 Score=311.01 Aligned_cols=149 Identities=20% Similarity=0.276 Sum_probs=94.4
Q ss_pred eecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccc
Q 046036 152 LNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMF 231 (614)
Q Consensus 152 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 231 (614)
|++++|.+++..+..+..+++|++|++++|.++ .+|..+..+++|++|++++|.+++..|..+..+++|++|++++|.+
T Consensus 259 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~ 337 (606)
T 3t6q_A 259 INLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTK 337 (606)
T ss_dssp EECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSS
T ss_pred EEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCc
Confidence 333333444333344556667777777777776 5666667777777777777777766666666777777777777766
Q ss_pred cccCCc-cccCCCccceEEccCCcCcccC--CcccCCCCCCCEEECcCCcCcccCCC-ccccCCCceEEEecCC
Q 046036 232 QGRIPP-FFGSFKGTIDLNLSHNNLSGTI--PKELETLPFLENLNLSFNNFEGQLPS-MSVFTNTSVISIVGNG 301 (614)
Q Consensus 232 ~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~l~~~~~~~N~ 301 (614)
.+.+|. .+..+++|+.|++++|.+++.. +..+..+++|+.|++++|.+++..|. +..+++++.+++.+|.
T Consensus 338 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 411 (606)
T 3t6q_A 338 RLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTR 411 (606)
T ss_dssp CCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCC
T ss_pred ccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCc
Confidence 654443 3666677777777777766554 55666667777777777766665543 3445666666666664
No 17
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.3e-33 Score=316.94 Aligned_cols=301 Identities=22% Similarity=0.179 Sum_probs=210.3
Q ss_pred CccccCCCC--CCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhh------------------------
Q 046036 4 PQEIGNLFR--LQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDS------------------------ 57 (614)
Q Consensus 4 p~~~~~l~~--L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------------------------ 57 (614)
|..|.+++. |+.|+|++|.+++..|..|+.+++|++|+|++|++++..|..|..
T Consensus 239 ~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp 318 (680)
T 1ziw_A 239 NTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLP 318 (680)
T ss_dssp TTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CC
T ss_pred hhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccccccccc
Confidence 455555543 788888888777777777777778888888887777766655321
Q ss_pred ------hccccccccEEEccCCcccccCCCCCcCCCCCCEEeccC----------------------------CcCcccC
Q 046036 58 ------FTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDR----------------------------NCLAGSI 103 (614)
Q Consensus 58 ------~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~----------------------------N~l~~~~ 103 (614)
|..++ +|++|++++|.+++..|..|.++++|++|++++ |++++..
T Consensus 319 ~i~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~ 397 (680)
T 1ziw_A 319 KIDDFSFQWLK-CLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIE 397 (680)
T ss_dssp EECTTTTTTCT-TCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEEC
T ss_pred ccChhhcccCC-CCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEC
Confidence 23343 566666666666655555555555444444433 3344444
Q ss_pred CccccCCCCCCccccccccc-------------ccceEecCCCccccccchhhhccCCCCeeecccccCC--CCCCCCCC
Q 046036 104 PFSIGKLQNLQKLNPLATSL-------------YSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLG--GSIPKPSG 168 (614)
Q Consensus 104 p~~~~~l~~L~~L~l~~~~~-------------~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~ 168 (614)
|..|..+++|+.|++..+.+ ++++|++++|++++..+..|..+++|+.|++++|.+. +.+|..+.
T Consensus 398 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~ 477 (680)
T 1ziw_A 398 SDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ 477 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTT
T ss_pred hhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccc
Confidence 55555555555555421111 3455556666655555555666666666666666654 45677788
Q ss_pred CCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCcc--------ccccCcccchHHhccCccccccCCcccc
Q 046036 169 LFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIP--------ITLGNRSKFEHLLLGGNMFQGRIPPFFG 240 (614)
Q Consensus 169 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~--------~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 240 (614)
.+++|+.|++++|.+++..+..|..+++|++|++++|.+++..+ ..|..+++|+.|+|++|+++...+..|.
T Consensus 478 ~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 557 (680)
T 1ziw_A 478 PLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK 557 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcc
Confidence 88888888888888887777778888888888888888876422 2367888889999999988855555788
Q ss_pred CCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCc-c-ccCCCceEEEecCCCccc
Q 046036 241 SFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSM-S-VFTNTSVISIVGNGKLCG 305 (614)
Q Consensus 241 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~-~~~~l~~~~~~~N~~~c~ 305 (614)
++++|+.|+|++|++++..+..|..+++|+.|++++|++++..+.. . .++++..+++.+||+.|.
T Consensus 558 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred cccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 8999999999999999777777888999999999999999877653 2 578899999999999986
No 18
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=8.4e-34 Score=296.48 Aligned_cols=285 Identities=19% Similarity=0.198 Sum_probs=223.7
Q ss_pred CCcc-ccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 3 VPQE-IGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 3 ip~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
+|.. |.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|.. |.+++ +|++|+|++|.++...+.
T Consensus 60 l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~l~-~L~~L~L~~n~l~~l~~~ 135 (390)
T 3o6n_A 60 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHV---FQNVP-LLTVLVLERNDLSSLPRG 135 (390)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTT---TTTCT-TCCEEECCSSCCCCCCTT
T ss_pred CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHH---hcCCC-CCCEEECCCCccCcCCHH
Confidence 5554 567889999999999998888888999999999999999998777776 66776 889999999998854444
Q ss_pred CCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc---------ccceEecCCCccccccchhhhccCCCCee
Q 046036 82 GIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL---------YSFQLNLAENNLTGNIPESLENLTSLQIL 152 (614)
Q Consensus 82 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~---------~l~~L~L~~N~l~~~~~~~~~~l~~L~~L 152 (614)
.|.++++|++|+|++|.+++..|..|+.+++|++|++..+.+ +++.|++++|.+++. ...++|+.|
T Consensus 136 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L 210 (390)
T 3o6n_A 136 IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL-----AIPIAVEEL 210 (390)
T ss_dssp TTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEE-----ECCSSCSEE
T ss_pred HhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccccc-----CCCCcceEE
Confidence 568889999999999999887788888888888888533322 455566666655522 233567777
Q ss_pred ecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCcccc
Q 046036 153 NLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQ 232 (614)
Q Consensus 153 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 232 (614)
++++|.+... |.. ..++|+.|++++|.+++. ..+..+++|++|++++|.+++..|..|..+++|+.|+|++|+++
T Consensus 211 ~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 285 (390)
T 3o6n_A 211 DASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV 285 (390)
T ss_dssp ECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC
T ss_pred ECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc
Confidence 7777777633 332 346888999999988853 56888899999999999998888888889999999999999988
Q ss_pred ccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCCccc
Q 046036 233 GRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGKLCG 305 (614)
Q Consensus 233 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~ 305 (614)
+ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+++... ...+++++.+++.+|++.|.
T Consensus 286 ~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 286 A-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp E-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred c-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccch
Confidence 4 5666778889999999999988 56666778889999999999988653 55678888999999988874
No 19
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.8e-33 Score=311.38 Aligned_cols=294 Identities=19% Similarity=0.173 Sum_probs=233.4
Q ss_pred CccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCC
Q 046036 4 PQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGI 83 (614)
Q Consensus 4 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~ 83 (614)
|..|.++++|++|+|++|.+++..|.+|+++++|++|+|++|.+++..|.. |.+++ +|++|+|++|.+++..+..+
T Consensus 49 ~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~---~~~l~-~L~~L~L~~n~l~~~~~~~~ 124 (606)
T 3vq2_A 49 SYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGS---FSGLT-SLENLVAVETKLASLESFPI 124 (606)
T ss_dssp TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTS---STTCT-TCCEEECTTSCCCCSSSSCC
T ss_pred hhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhh---cCCcc-cCCEEEccCCcccccccccc
Confidence 346778888888888888888877888888888888888888888777777 66676 78888888888876666778
Q ss_pred cCCCCCCEEeccCCcCcc-cCCccccCCCCCCccccccccc------------c----cceEecCCCccccccch-----
Q 046036 84 PKYFNLIQLGLDRNCLAG-SIPFSIGKLQNLQKLNPLATSL------------Y----SFQLNLAENNLTGNIPE----- 141 (614)
Q Consensus 84 ~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~~~~------------~----l~~L~L~~N~l~~~~~~----- 141 (614)
+++++|++|+|++|.+++ .+|..|+++++|++|++..+.+ + +..|++++|.+++..+.
T Consensus 125 ~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~ 204 (606)
T 3vq2_A 125 GQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI 204 (606)
T ss_dssp TTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC
T ss_pred CCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc
Confidence 888888888888888875 4577888888888877622211 0 11333333333211111
Q ss_pred --------------------------------------------------------------------------------
Q 046036 142 -------------------------------------------------------------------------------- 141 (614)
Q Consensus 142 -------------------------------------------------------------------------------- 141 (614)
T Consensus 205 ~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l 284 (606)
T 3vq2_A 205 KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCL 284 (606)
T ss_dssp EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGG
T ss_pred eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccC
Confidence
Q ss_pred ------------------------------------------------------------hhhccCCCCeeecccccCCC
Q 046036 142 ------------------------------------------------------------SLENLTSLQILNLSCNHLGG 161 (614)
Q Consensus 142 ------------------------------------------------------------~~~~l~~L~~L~L~~N~l~~ 161 (614)
.+..+++|++|++++|.+++
T Consensus 285 ~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~ 364 (606)
T 3vq2_A 285 ANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSF 364 (606)
T ss_dssp TTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEE
T ss_pred CCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCC
Confidence 12345667777777777775
Q ss_pred C--CCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCcc-ccccCcccchHHhccCccccccCCcc
Q 046036 162 S--IPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIP-ITLGNRSKFEHLLLGGNMFQGRIPPF 238 (614)
Q Consensus 162 ~--~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~ 238 (614)
. +|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|.+++..| ..+..+++|+.|++++|.+++..|..
T Consensus 365 ~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 443 (606)
T 3vq2_A 365 SGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGI 443 (606)
T ss_dssp EEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTT
T ss_pred CcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhh
Confidence 4 37778899999999999999985 66889999999999999999998887 68999999999999999999999999
Q ss_pred ccCCCccceEEccCCcCcc-cCCcccCCCCCCCEEECcCCcCcccCCC-ccccCCCceEEEecCCC
Q 046036 239 FGSFKGTIDLNLSHNNLSG-TIPKELETLPFLENLNLSFNNFEGQLPS-MSVFTNTSVISIVGNGK 302 (614)
Q Consensus 239 ~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~l~~~~~~~N~~ 302 (614)
+..+++|++|++++|++++ .+|..+..+++|+.|++++|.+++.+|. +..+++++.+++.+|..
T Consensus 444 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 509 (606)
T 3vq2_A 444 FLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNL 509 (606)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred hcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcC
Confidence 9999999999999999998 4788999999999999999999998775 56788999999999964
No 20
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4e-34 Score=322.86 Aligned_cols=290 Identities=21% Similarity=0.267 Sum_probs=235.0
Q ss_pred CCccccCCCCCCeeeecCCcccc-----------------cCCcCCC--CCCCCcEEecccccCcccCCcChhhhccccc
Q 046036 3 VPQEIGNLFRLQNLNFGNSTVQG-----------------EIPSHLS--PTSKLTYLSLFSNNLHGIIPPSLDSFTNLST 63 (614)
Q Consensus 3 ip~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~ 63 (614)
||++|+++++|++|+|++|.|++ .+|+.++ ++++|++|+|++|++.+.+|.. |.+++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~---l~~L~- 515 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDF---LYDLP- 515 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGG---GGGCS-
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHH---HhCCC-
Confidence 89999999999999999999998 3899988 9999999999999999999988 77887
Q ss_pred cccEEEccCCc-ccc-cCCCCCcCC-------CCCCEEeccCCcCcccCCc--cccCCCCCCccccccccc---------
Q 046036 64 KLRILDAGGNQ-FAG-DIPAGIPKY-------FNLIQLGLDRNCLAGSIPF--SIGKLQNLQKLNPLATSL--------- 123 (614)
Q Consensus 64 ~L~~L~L~~N~-l~~-~~p~~~~~l-------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~l~~~~~--------- 123 (614)
+|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .|+++++|+.|++..+.+
T Consensus 516 ~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp~~~~L 594 (876)
T 4ecn_A 516 ELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRHLEAFGTN 594 (876)
T ss_dssp SCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCBCCCCCTT
T ss_pred CCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcccchhhcCC
Confidence 99999999998 988 788766555 49999999999999 8898 999999999999733222
Q ss_pred -ccceEecCCCccccccchhhhccCC-CCeeecccccCCCCCCCCCCCCCC--CCEEEcCCCCCccCCccc---cc--CC
Q 046036 124 -YSFQLNLAENNLTGNIPESLENLTS-LQILNLSCNHLGGSIPKPSGLFST--LSSIDFAHNNFNGSLPLE---VG--SL 194 (614)
Q Consensus 124 -~l~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~~~~---~~--~l 194 (614)
+++.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|..+..++. |+.|+|++|.+++.+|.. +. .+
T Consensus 595 ~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~ 672 (876)
T 4ecn_A 595 VKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKG 672 (876)
T ss_dssp SEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCC
T ss_pred CcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccC
Confidence 6778888888888 77777888888 888888888888 67777766654 888888888888765532 22 33
Q ss_pred CCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccC--------CCccceEEccCCcCcccCCcccC--
Q 046036 195 SNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGS--------FKGTIDLNLSHNNLSGTIPKELE-- 264 (614)
Q Consensus 195 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~-- 264 (614)
.+|+.|+|++|.++...+..+..+++|+.|+|++|.++ .+|..+.. +++|+.|+|++|+|+ .+|..+.
T Consensus 673 ~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~ 750 (876)
T 4ecn_A 673 INASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRAT 750 (876)
T ss_dssp CCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTT
T ss_pred CCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhc
Confidence 47888888888888543344457888888888888888 55554332 238888888888888 6777776
Q ss_pred CCCCCCEEECcCCcCcccCCCccccCCCceEEEecCC
Q 046036 265 TLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNG 301 (614)
Q Consensus 265 ~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~ 301 (614)
.+++|+.|+|++|++++.++....+++++.+++.+|+
T Consensus 751 ~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~ 787 (876)
T 4ecn_A 751 TLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQR 787 (876)
T ss_dssp TCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCB
T ss_pred cCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCC
Confidence 8888888888888888855566778888888888765
No 21
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1e-33 Score=312.00 Aligned_cols=286 Identities=19% Similarity=0.202 Sum_probs=236.2
Q ss_pred CCCcc-ccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCC
Q 046036 2 NVPQE-IGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIP 80 (614)
Q Consensus 2 ~ip~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p 80 (614)
.+|+. |.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|.. |.+++ +|++|+|++|.+++..+
T Consensus 65 ~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~l~-~L~~L~L~~n~l~~l~~ 140 (597)
T 3oja_B 65 KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHV---FQNVP-LLTVLVLERNDLSSLPR 140 (597)
T ss_dssp EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTT---TTTCT-TCCEEECCSSCCCCCCT
T ss_pred CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHH---HcCCC-CCCEEEeeCCCCCCCCH
Confidence 35554 567899999999999999888889999999999999999999877776 67777 89999999999986555
Q ss_pred CCCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc---------ccceEecCCCccccccchhhhccCCCCe
Q 046036 81 AGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL---------YSFQLNLAENNLTGNIPESLENLTSLQI 151 (614)
Q Consensus 81 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~---------~l~~L~L~~N~l~~~~~~~~~~l~~L~~ 151 (614)
..|.++++|++|+|++|.+++..|..|+.+++|++|++..+.+ +++.|++++|.+++ +...++|+.
T Consensus 141 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~ 215 (597)
T 3oja_B 141 GIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLST-----LAIPIAVEE 215 (597)
T ss_dssp TTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSE-----EECCTTCSE
T ss_pred HHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccc-----ccCCchhhe
Confidence 6678999999999999999988888899999999998533322 45566666666653 223456777
Q ss_pred eecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccc
Q 046036 152 LNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMF 231 (614)
Q Consensus 152 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 231 (614)
|++++|.+... +..+ .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|.+
T Consensus 216 L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 290 (597)
T 3oja_B 216 LDASHNSINVV-RGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL 290 (597)
T ss_dssp EECCSSCCCEE-ECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCC
T ss_pred eeccCCccccc-cccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCC
Confidence 77777777633 3222 3689999999999986 36789999999999999999999999999999999999999999
Q ss_pred cccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCCccc
Q 046036 232 QGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGKLCG 305 (614)
Q Consensus 232 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~ 305 (614)
++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|.+++.. ...++++..+++.+|++.|.
T Consensus 291 ~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 291 VA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred CC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCCh
Confidence 85 5777788999999999999999 57777888999999999999998764 45688999999999998885
No 22
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=308.84 Aligned_cols=165 Identities=25% Similarity=0.247 Sum_probs=115.2
Q ss_pred chhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCc-ccccCCCCCceeccCCccCCCCccccccCc
Q 046036 140 PESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLP-LEVGSLSNTQELDFSEHMLSDEIPITLGNR 218 (614)
Q Consensus 140 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 218 (614)
+..+..+++|++|++++|.+.+..+ .+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+++..|..|..+
T Consensus 366 ~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 444 (570)
T 2z63_A 366 SQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 444 (570)
T ss_dssp EHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTC
T ss_pred cccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcC
Confidence 3444455555555555555553322 25666677777777777765544 456677777777777777777777777777
Q ss_pred ccchHHhccCcccc-ccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCC-ccccCCCceEE
Q 046036 219 SKFEHLLLGGNMFQ-GRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPS-MSVFTNTSVIS 296 (614)
Q Consensus 219 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~l~~~~ 296 (614)
++|+.|++++|.++ +.+|..+..+++|+.|+|++|++++..|..|..+++|+.|++++|++++.+|. +..+++++.++
T Consensus 445 ~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 524 (570)
T 2z63_A 445 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIW 524 (570)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEE
Confidence 77888888888776 46777777778888888888888777777777788888888888888777664 45667777888
Q ss_pred EecCCCccc
Q 046036 297 IVGNGKLCG 305 (614)
Q Consensus 297 ~~~N~~~c~ 305 (614)
+.+|++.|.
T Consensus 525 l~~N~~~~~ 533 (570)
T 2z63_A 525 LHTNPWDCS 533 (570)
T ss_dssp CCSSCBCCC
T ss_pred ecCCcccCC
Confidence 888877764
No 23
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.1e-32 Score=281.28 Aligned_cols=272 Identities=20% Similarity=0.231 Sum_probs=231.7
Q ss_pred CCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCC
Q 046036 11 FRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLI 90 (614)
Q Consensus 11 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 90 (614)
.+++.++++++.++ .+|..+. ++|++|+|++|++++..+.. |.+++ +|++|+|++|.+++..|..|..+++|+
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~---~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGD---FKNLK-NLHTLILINNKISKISPGAFAPLVKLE 103 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTT---TTTCT-TCCEEECCSSCCCCBCTTTTTTCTTCC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhh---hccCC-CCCEEECCCCcCCeeCHHHhcCCCCCC
Confidence 37899999999998 5676664 68999999999999777767 67777 899999999999988899999999999
Q ss_pred EEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCC--CCCCCCC
Q 046036 91 QLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGG--SIPKPSG 168 (614)
Q Consensus 91 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~ 168 (614)
+|+|++|+++ .+|..+. ++|++|+ +++|.+++..+..|.++++|++|++++|.+.. ..+..+.
T Consensus 104 ~L~Ls~n~l~-~l~~~~~--~~L~~L~------------l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 168 (330)
T 1xku_A 104 RLYLSKNQLK-ELPEKMP--KTLQELR------------VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 168 (330)
T ss_dssp EEECCSSCCS-BCCSSCC--TTCCEEE------------CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGG
T ss_pred EEECCCCcCC-ccChhhc--ccccEEE------------CCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhcc
Confidence 9999999998 5665554 6777666 99999998888889999999999999999963 6677788
Q ss_pred CCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceE
Q 046036 169 LFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDL 248 (614)
Q Consensus 169 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 248 (614)
.+++|++|++++|.++ .+|..+. ++|++|++++|.+++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|
T Consensus 169 ~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 245 (330)
T 1xku_A 169 GMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLREL 245 (330)
T ss_dssp GCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEE
T ss_pred CCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEE
Confidence 8999999999999998 4565543 889999999999998888899999999999999999998888889999999999
Q ss_pred EccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCcc-------ccCCCceEEEecCCCcccCCC
Q 046036 249 NLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMS-------VFTNTSVISIVGNGKLCGGVP 308 (614)
Q Consensus 249 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-------~~~~l~~~~~~~N~~~c~~~~ 308 (614)
+|++|+++ .+|..+..+++|+.|++++|++++..+... ....+..+++.+||..+..++
T Consensus 246 ~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~ 311 (330)
T 1xku_A 246 HLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQ 311 (330)
T ss_dssp ECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSC
T ss_pred ECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccC
Confidence 99999999 778889999999999999999987655321 246677899999998776543
No 24
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.2e-32 Score=306.38 Aligned_cols=138 Identities=19% Similarity=0.216 Sum_probs=115.0
Q ss_pred CCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccC-CCCccccccCcccchHHhccCccccccCCccccCCCccc
Q 046036 168 GLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHML-SDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTI 246 (614)
Q Consensus 168 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 246 (614)
..+++++.+++++|.+.+..+..+..++.|+.|++++|.+ .+..|..|..+++|+.|+|++|+|++..|..|.++++|+
T Consensus 442 ~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~ 521 (635)
T 4g8a_A 442 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 521 (635)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCC
Confidence 3445555666666666666666677778888888888874 445778899999999999999999998899999999999
Q ss_pred eEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCc-ccc-CCCceEEEecCCCccc
Q 046036 247 DLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSM-SVF-TNTSVISIVGNGKLCG 305 (614)
Q Consensus 247 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~-~~l~~~~~~~N~~~c~ 305 (614)
.|+|++|+|++..|..|..+++|+.|++++|++++.+|.. ..+ ++++.+++.+||+.|.
T Consensus 522 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 522 VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp EEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred EEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 9999999999988999999999999999999999988753 334 6799999999999984
No 25
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.2e-32 Score=279.15 Aligned_cols=280 Identities=20% Similarity=0.232 Sum_probs=237.8
Q ss_pred CCCccccCC------CCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcc
Q 046036 2 NVPQEIGNL------FRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQF 75 (614)
Q Consensus 2 ~ip~~~~~l------~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l 75 (614)
++|..+... .+++.+++++|.++ .+|..+. ++|++|+|++|.+++..|.. |.+++ +|++|+|++|++
T Consensus 18 ~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~---~~~l~-~L~~L~L~~n~l 90 (332)
T 2ft3_A 18 SLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDD---FKGLQ-HLYALVLVNNKI 90 (332)
T ss_dssp -------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTT---TTTCT-TCCEEECCSSCC
T ss_pred cCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhH---hhCCC-CCcEEECCCCcc
Confidence 456655543 37999999999999 6777664 68999999999999877777 77787 999999999999
Q ss_pred cccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecc
Q 046036 76 AGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLS 155 (614)
Q Consensus 76 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 155 (614)
++..|..|.++++|++|+|++|.++ .+|..+. ++|++|+ +++|++++..+..|..+++|++|+++
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~------------l~~n~i~~~~~~~~~~l~~L~~L~l~ 155 (332)
T 2ft3_A 91 SKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELR------------IHDNRIRKVPKGVFSGLRNMNCIEMG 155 (332)
T ss_dssp CEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEE------------CCSSCCCCCCSGGGSSCSSCCEEECC
T ss_pred CccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEE------------CCCCccCccCHhHhCCCccCCEEECC
Confidence 9888999999999999999999998 5665554 6777776 99999998878889999999999999
Q ss_pred cccCC--CCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccc
Q 046036 156 CNHLG--GSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQG 233 (614)
Q Consensus 156 ~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 233 (614)
+|.++ +..+..+..+ +|++|++++|.+++ +|..+. ++|++|++++|.+++..+..|..+++|+.|+|++|.+++
T Consensus 156 ~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 231 (332)
T 2ft3_A 156 GNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM 231 (332)
T ss_dssp SCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC
T ss_pred CCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc
Confidence 99996 3677778888 99999999999995 665554 799999999999999888999999999999999999998
Q ss_pred cCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCcc-------ccCCCceEEEecCCCcccC
Q 046036 234 RIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMS-------VFTNTSVISIVGNGKLCGG 306 (614)
Q Consensus 234 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-------~~~~l~~~~~~~N~~~c~~ 306 (614)
..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+... ....+..+++.+||+.+..
T Consensus 232 ~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~ 310 (332)
T 2ft3_A 232 IENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWE 310 (332)
T ss_dssp CCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGG
T ss_pred CChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccc
Confidence 88889999999999999999999 788889999999999999999997765321 1456788999999987654
Q ss_pred CC
Q 046036 307 VP 308 (614)
Q Consensus 307 ~~ 308 (614)
++
T Consensus 311 ~~ 312 (332)
T 2ft3_A 311 VQ 312 (332)
T ss_dssp SC
T ss_pred cC
Confidence 43
No 26
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=314.79 Aligned_cols=294 Identities=21% Similarity=0.211 Sum_probs=214.6
Q ss_pred CCCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccC-CcChhhhccccccccEEEccCCcccccCC
Q 046036 2 NVPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGII-PPSLDSFTNLSTKLRILDAGGNQFAGDIP 80 (614)
Q Consensus 2 ~ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~~~~l~~~L~~L~L~~N~l~~~~p 80 (614)
.||. -.++|++|+|++|.|++..|..|.++++|++|+|++|.+.+.+ |.. |.+++ +|++|+|++|.+++..|
T Consensus 18 ~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~---f~~L~-~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 18 QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEA---FRNLP-NLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTT---TSSCT-TCCEEECTTCCCCEECT
T ss_pred CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHH---hcCCC-CCCEEECCCCcCcccCH
Confidence 3565 3567888888888888777888888888888888888555454 555 66776 78888888888877777
Q ss_pred CCCcCCCCCCEEeccCCcCcccCCcc--ccCCCCCCccccccc---------cc----ccceEecCCCccccccchhhhc
Q 046036 81 AGIPKYFNLIQLGLDRNCLAGSIPFS--IGKLQNLQKLNPLAT---------SL----YSFQLNLAENNLTGNIPESLEN 145 (614)
Q Consensus 81 ~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~l~~~---------~~----~l~~L~L~~N~l~~~~~~~~~~ 145 (614)
..|.++++|++|+|++|.+++.+|.. |+++++|++|++..+ .+ +|+.|+|++|.+++..+..|..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 78888888888888888887765554 778888888876221 11 5677778888888777777777
Q ss_pred c--CCCCeeecccccCCCCCCCCCCCCCC------CCEEEcCCCCCccCCcccccC------------------------
Q 046036 146 L--TSLQILNLSCNHLGGSIPKPSGLFST------LSSIDFAHNNFNGSLPLEVGS------------------------ 193 (614)
Q Consensus 146 l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~~~~~~~------------------------ 193 (614)
+ ++|+.|+|++|.+.+..|..++.+++ |+.|++++|.+++..+..+..
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 7 77888888888887777766655554 777888877776555543322
Q ss_pred --------------CCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccC
Q 046036 194 --------------LSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTI 259 (614)
Q Consensus 194 --------------l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 259 (614)
.++|+.|++++|.+++..+..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|++++..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 156777777777777777777777777888888888777777777777777888888888777777
Q ss_pred CcccCCCCCCCEEECcCCcCcccCCC-ccccCCCceEEEecCCC
Q 046036 260 PKELETLPFLENLNLSFNNFEGQLPS-MSVFTNTSVISIVGNGK 302 (614)
Q Consensus 260 p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~l~~~~~~~N~~ 302 (614)
|..|..+++|+.|++++|.+++..+. +..+++++.+++.+|..
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 374 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL 374 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCS
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCC
Confidence 77777777788888887777766553 45567777777777753
No 27
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.6e-32 Score=280.25 Aligned_cols=274 Identities=22% Similarity=0.273 Sum_probs=238.7
Q ss_pred CCCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 2 NVPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 2 ~ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
.+|..+ .++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|.. |.+++ +|++|+|++|+++ .+|.
T Consensus 47 ~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~l~-~L~~L~L~~n~l~-~l~~ 119 (332)
T 2ft3_A 47 AVPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKA---FSPLR-KLQKLYISKNHLV-EIPP 119 (332)
T ss_dssp SCCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGG---STTCT-TCCEEECCSSCCC-SCCS
T ss_pred ccCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhH---hhCcC-CCCEEECCCCcCC-ccCc
Confidence 467766 378999999999999888999999999999999999999888887 77787 9999999999998 6776
Q ss_pred CCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccc--cccchhhhccCCCCeeecccccC
Q 046036 82 GIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLT--GNIPESLENLTSLQILNLSCNHL 159 (614)
Q Consensus 82 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l 159 (614)
.+. ++|++|++++|.+++..+..|..+++|+.|+ +++|.++ +..+..|..+ +|++|++++|++
T Consensus 120 ~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~------------l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 120 NLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIE------------MGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp SCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEE------------CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred ccc--ccCCEEECCCCccCccCHhHhCCCccCCEEE------------CCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 665 7999999999999977777899999999888 9999996 4778888888 999999999999
Q ss_pred CCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccc
Q 046036 160 GGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFF 239 (614)
Q Consensus 160 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 239 (614)
++ +|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.+++..+..|..+++|+.|+|++|+++ .+|..+
T Consensus 185 ~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 260 (332)
T 2ft3_A 185 TG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGL 260 (332)
T ss_dssp SS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTG
T ss_pred Cc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhh
Confidence 95 666554 79999999999999888889999999999999999999988889999999999999999999 788889
Q ss_pred cCCCccceEEccCCcCcccCCcccCC------CCCCCEEECcCCcCc--ccCCC-ccccCCCceEEEecCC
Q 046036 240 GSFKGTIDLNLSHNNLSGTIPKELET------LPFLENLNLSFNNFE--GQLPS-MSVFTNTSVISIVGNG 301 (614)
Q Consensus 240 ~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~ls~N~l~--~~~p~-~~~~~~l~~~~~~~N~ 301 (614)
..+++|+.|++++|++++..+..|.. .++|+.|++++|++. +..|. +..+++++.+++.+|.
T Consensus 261 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 261 PDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred hcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 99999999999999999887777765 367999999999997 33332 4557778888888774
No 28
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.4e-33 Score=305.47 Aligned_cols=111 Identities=22% Similarity=0.244 Sum_probs=79.0
Q ss_pred CccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccc-cCCCC
Q 046036 4 PQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAG-DIPAG 82 (614)
Q Consensus 4 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~-~~p~~ 82 (614)
|..|.++++|++|+|++|++++..|++|+++++|++|+|++|++++..|.. |.+++ +|++|+|++|.+++ ..|..
T Consensus 43 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~---~~~l~-~L~~L~Ls~n~l~~~~~~~~ 118 (549)
T 2z81_A 43 HGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSW---FGPLS-SLKYLNLMGNPYQTLGVTSL 118 (549)
T ss_dssp SSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHH---HTTCT-TCCEEECTTCCCSSSCSSCS
T ss_pred hhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHH---hccCC-CCcEEECCCCcccccchhhh
Confidence 567888888888888888888888888888888888888888888666655 56666 77788888887765 24556
Q ss_pred CcCCCCCCEEeccCCcCcccCC-ccccCCCCCCcccc
Q 046036 83 IPKYFNLIQLGLDRNCLAGSIP-FSIGKLQNLQKLNP 118 (614)
Q Consensus 83 ~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l 118 (614)
+.++++|++|++++|.+.+.+| ..|+++++|++|++
T Consensus 119 ~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L 155 (549)
T 2z81_A 119 FPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEI 155 (549)
T ss_dssp CTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEE
T ss_pred hhccCCccEEECCCCccccccCHhhhhcccccCeeec
Confidence 6677777777777766333333 45555555555554
No 29
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-32 Score=314.40 Aligned_cols=292 Identities=18% Similarity=0.154 Sum_probs=247.7
Q ss_pred CCccccCCCCCCeeeecCCcccccC-CcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 3 VPQEIGNLFRLQNLNFGNSTVQGEI-PSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 3 ip~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
.|..|.++++|++|+|++|.+.+.+ |++|+++++|++|+|++|.+++..|.. |.+++ +|++|+|++|.+++.+|.
T Consensus 40 ~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~---~~~l~-~L~~L~Ls~n~l~~~~~~ 115 (844)
T 3j0a_A 40 TASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA---FQGLF-HLFELRLYFCGLSDAVLK 115 (844)
T ss_dssp CSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS---SCSCS-SCCCEECTTCCCSSCCST
T ss_pred ChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH---ccCCc-ccCEeeCcCCCCCccccc
Confidence 4778999999999999999655444 889999999999999999999888888 77787 899999999999876665
Q ss_pred C--CcCCCCCCEEeccCCcCcccCC-ccccCCCCCCccccccccc--------------ccceEecCCCccccccchhhh
Q 046036 82 G--IPKYFNLIQLGLDRNCLAGSIP-FSIGKLQNLQKLNPLATSL--------------YSFQLNLAENNLTGNIPESLE 144 (614)
Q Consensus 82 ~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~~~~--------------~l~~L~L~~N~l~~~~~~~~~ 144 (614)
. |.++++|++|+|++|.+++..+ ..|+++++|++|++..+.+ +++.|+|++|.+.+..|..+.
T Consensus 116 ~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~ 195 (844)
T 3j0a_A 116 DGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWG 195 (844)
T ss_dssp TCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCC
T ss_pred CccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchh
Confidence 5 8899999999999999987755 5789999999998833322 577899999999988887777
Q ss_pred ccCC------CCeeecccccCCCCCCCCCCC--------------------------------------CCCCCEEEcCC
Q 046036 145 NLTS------LQILNLSCNHLGGSIPKPSGL--------------------------------------FSTLSSIDFAH 180 (614)
Q Consensus 145 ~l~~------L~~L~L~~N~l~~~~p~~~~~--------------------------------------l~~L~~L~Ls~ 180 (614)
.+.+ |+.|++++|.+++..+..+.. .++|+.|++++
T Consensus 196 ~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~ 275 (844)
T 3j0a_A 196 KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSH 275 (844)
T ss_dssp SSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTT
T ss_pred hcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCC
Confidence 7665 999999999877655543221 26799999999
Q ss_pred CCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCC
Q 046036 181 NNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIP 260 (614)
Q Consensus 181 N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 260 (614)
|.+++..+..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..|..|..+++|+.|++++|++++..+
T Consensus 276 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 355 (844)
T 3j0a_A 276 GFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQD 355 (844)
T ss_dssp CCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCS
T ss_pred CcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccCh
Confidence 99998888889999999999999999998888899999999999999999998889999999999999999999998888
Q ss_pred cccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCC
Q 046036 261 KELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGK 302 (614)
Q Consensus 261 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~ 302 (614)
..|..+++|+.|++++|.+++... ++++..+++.+|..
T Consensus 356 ~~~~~l~~L~~L~Ls~N~l~~i~~----~~~L~~L~l~~N~l 393 (844)
T 3j0a_A 356 QTFKFLEKLQTLDLRDNALTTIHF----IPSIPDIFLSGNKL 393 (844)
T ss_dssp SCSCSCCCCCEEEEETCCSCCCSS----CCSCSEEEEESCCC
T ss_pred hhhcCCCCCCEEECCCCCCCcccC----CCCcchhccCCCCc
Confidence 889999999999999999886432 56677777777754
No 30
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=7.9e-32 Score=274.88 Aligned_cols=274 Identities=18% Similarity=0.238 Sum_probs=238.3
Q ss_pred CCCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 2 NVPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 2 ~ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
.+|..+. ++|+.|+|++|++++..+..|+++++|++|+|++|++++..|.. |.+++ +|++|+|++|+++ .+|.
T Consensus 45 ~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~l~-~L~~L~Ls~n~l~-~l~~ 117 (330)
T 1xku_A 45 KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA---FAPLV-KLERLYLSKNQLK-ELPE 117 (330)
T ss_dssp SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTT---TTTCT-TCCEEECCSSCCS-BCCS
T ss_pred ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHH---hcCCC-CCCEEECCCCcCC-ccCh
Confidence 3566553 68999999999999888889999999999999999999888888 77787 9999999999998 6776
Q ss_pred CCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCcccc--ccchhhhccCCCCeeecccccC
Q 046036 82 GIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTG--NIPESLENLTSLQILNLSCNHL 159 (614)
Q Consensus 82 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l 159 (614)
.+. ++|++|++++|.+++..+..|.++++|+.|+ +++|.++. ..+..|..+++|++|++++|.+
T Consensus 118 ~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~------------l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 118 KMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVE------------LGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp SCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEE------------CCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred hhc--ccccEEECCCCcccccCHhHhcCCccccEEE------------CCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 665 7999999999999988888899999999888 99999963 7788899999999999999999
Q ss_pred CCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccc
Q 046036 160 GGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFF 239 (614)
Q Consensus 160 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 239 (614)
+ .+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|+|++|.++ .+|..+
T Consensus 184 ~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 259 (330)
T 1xku_A 184 T-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259 (330)
T ss_dssp C-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred c-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh
Confidence 8 5666554 89999999999999888999999999999999999999888889999999999999999999 788899
Q ss_pred cCCCccceEEccCCcCcccCCcccCC------CCCCCEEECcCCcCccc--CC-CccccCCCceEEEecC
Q 046036 240 GSFKGTIDLNLSHNNLSGTIPKELET------LPFLENLNLSFNNFEGQ--LP-SMSVFTNTSVISIVGN 300 (614)
Q Consensus 240 ~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~ls~N~l~~~--~p-~~~~~~~l~~~~~~~N 300 (614)
..+++|++|++++|++++..+..|.. .+.++.|++++|++... .| ....+..++.+++.+|
T Consensus 260 ~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred ccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 99999999999999999887777754 37899999999999742 22 3344567777888776
No 31
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.7e-32 Score=305.06 Aligned_cols=265 Identities=22% Similarity=0.188 Sum_probs=145.7
Q ss_pred cccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcC
Q 046036 6 EIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPK 85 (614)
Q Consensus 6 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~ 85 (614)
.|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+.. |.+++ +|++|+|++|++++..|..|++
T Consensus 44 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~---~~~l~-~L~~L~L~~n~l~~~~~~~~~~ 119 (680)
T 1ziw_A 44 NFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKT---FAFCT-NLTELHLMSNSIQKIKNNPFVK 119 (680)
T ss_dssp GGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTT---TTTCT-TCSEEECCSSCCCCCCSCTTTT
T ss_pred HHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhh---hccCC-CCCEEECCCCccCccChhHccc
Confidence 4666667777777777776666666666777777777777766444444 55555 6777777777776555566777
Q ss_pred CCCCCEEeccCCcCcccCCccccCCCCCCccccccccc--------------ccceEecCCCccccccchhhhcc-----
Q 046036 86 YFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL--------------YSFQLNLAENNLTGNIPESLENL----- 146 (614)
Q Consensus 86 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~--------------~l~~L~L~~N~l~~~~~~~~~~l----- 146 (614)
+++|++|+|++|.+++..|..++++++|++|++..+.+ +++.|++++|.+++..|..|..+
T Consensus 120 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 199 (680)
T 1ziw_A 120 QKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFG 199 (680)
T ss_dssp CTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECE
T ss_pred cCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhh
Confidence 77777777777777766666667777777776522111 45566666666665555544432
Q ss_pred ----------------------CCCCeeecccccCCCCCCCCCCCCCC--CCEEEcCCCCCccCCcccccCCCCCceecc
Q 046036 147 ----------------------TSLQILNLSCNHLGGSIPKPSGLFST--LSSIDFAHNNFNGSLPLEVGSLSNTQELDF 202 (614)
Q Consensus 147 ----------------------~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 202 (614)
++|+.|++++|.+++..|..+..++. |+.|++++|.+++..|..|..+++|++|++
T Consensus 200 L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (680)
T 1ziw_A 200 LFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFL 279 (680)
T ss_dssp EECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred hhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeC
Confidence 23344444444444444444444432 555555555555555555555555555555
Q ss_pred CCccCCCCccccccCcccchHHhccCccccc-----cCCc----cccCCCccceEEccCCcCcccCCcccCCCCCCCEEE
Q 046036 203 SEHMLSDEIPITLGNRSKFEHLLLGGNMFQG-----RIPP----FFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLN 273 (614)
Q Consensus 203 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-----~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 273 (614)
++|.+++..|..|..+++|+.|++++|...+ .+|. .|..+++|+.|++++|++++..+..|..+++|+.|+
T Consensus 280 ~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 359 (680)
T 1ziw_A 280 EYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLS 359 (680)
T ss_dssp CSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEE
T ss_pred CCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEE
Confidence 5555555444444444444444444332221 1111 333444444444444444444444444444333333
Q ss_pred C
Q 046036 274 L 274 (614)
Q Consensus 274 l 274 (614)
+
T Consensus 360 L 360 (680)
T 1ziw_A 360 L 360 (680)
T ss_dssp C
T ss_pred C
Confidence 3
No 32
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.98 E-value=2.1e-32 Score=301.58 Aligned_cols=294 Identities=20% Similarity=0.177 Sum_probs=249.4
Q ss_pred CccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCC
Q 046036 4 PQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGI 83 (614)
Q Consensus 4 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~ 83 (614)
|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.|++..+.. |.+++ +|++|+|++|.+++..|..|
T Consensus 92 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~---~~~l~-~L~~L~Ls~N~l~~~~~~~~ 167 (597)
T 3oja_B 92 TYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGI---FHNTP-KLTTLSMSNNNLERIEDDTF 167 (597)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT---TTTCT-TCCEEECCSSCCCBCCTTTT
T ss_pred hHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHH---hccCC-CCCEEEeeCCcCCCCChhhh
Confidence 458999999999999999999999999999999999999999999655555 67787 99999999999998888899
Q ss_pred cCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc-------ccceEecCCCccccccchhhhccCCCCeeeccc
Q 046036 84 PKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL-------YSFQLNLAENNLTGNIPESLENLTSLQILNLSC 156 (614)
Q Consensus 84 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~-------~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 156 (614)
..+++|++|+|++|.+++.. ++.+++|+.|++..+.+ .++.|++++|.++...+.. .++|+.|+|++
T Consensus 168 ~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~ 241 (597)
T 3oja_B 168 QATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPV---NVELTILKLQH 241 (597)
T ss_dssp TTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCS
T ss_pred hcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCccccccccc---CCCCCEEECCC
Confidence 99999999999999998653 56678888888744433 7899999999998554432 37899999999
Q ss_pred ccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCC
Q 046036 157 NHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIP 236 (614)
Q Consensus 157 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 236 (614)
|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|
T Consensus 242 n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~ 317 (597)
T 3oja_B 242 NNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVE 317 (597)
T ss_dssp SCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCG
T ss_pred CCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccC
Confidence 99986 4678899999999999999999999999999999999999999986 5777788999999999999999 678
Q ss_pred ccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCCcccCCCCcccccc
Q 046036 237 PFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGKLCGGVPELRLLSC 315 (614)
Q Consensus 237 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~~~~~~~~~c 315 (614)
..+..+++|+.|+|++|.+++. + +..+++|+.|++++|++++.... ..+..+....+.+++..|+.........|
T Consensus 318 ~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~~~~~~~c 392 (597)
T 3oja_B 318 RNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQLEHGLC 392 (597)
T ss_dssp GGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTCEEETTEE
T ss_pred cccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcchhccCCcc
Confidence 8899999999999999999965 3 67889999999999999876321 22344444456788889986554443334
No 33
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=1.7e-31 Score=274.52 Aligned_cols=273 Identities=22% Similarity=0.305 Sum_probs=151.8
Q ss_pred ccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCC
Q 046036 7 IGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKY 86 (614)
Q Consensus 7 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l 86 (614)
+..+++|++|+|++|.+++..+ |..+++|++|+|++|.++. +| . +.+++ +|++|++++|.+++ ++. +..+
T Consensus 62 ~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~---~~~l~-~L~~L~l~~n~i~~-~~~-~~~l 131 (347)
T 4fmz_A 62 IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-A---LQNLT-NLRELYLNEDNISD-ISP-LANL 131 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-G---GTTCT-TCSEEECTTSCCCC-CGG-GTTC
T ss_pred hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-H---HcCCC-cCCEEECcCCcccC-chh-hccC
Confidence 5556666666666666663322 6666666666666666653 22 2 45555 66666666666653 222 5566
Q ss_pred CCCCEEeccCCcCcccCCccccCCCCCCccccccccc----------ccceEecCCCccccccchhhhccCCCCeeeccc
Q 046036 87 FNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL----------YSFQLNLAENNLTGNIPESLENLTSLQILNLSC 156 (614)
Q Consensus 87 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~----------~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 156 (614)
++|++|++++|.....++ .+..+++|++|++..+.+ +++.|++++|.+++..+ +..+++|+.|++++
T Consensus 132 ~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~ 208 (347)
T 4fmz_A 132 TKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYV 208 (347)
T ss_dssp TTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred CceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchhhccCCCCCEEEccCCccccccc--ccCCCccceeeccc
Confidence 666666666664443332 356666666665422211 45555555555553322 55555555555555
Q ss_pred ccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCC
Q 046036 157 NHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIP 236 (614)
Q Consensus 157 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 236 (614)
|.+.+..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|.+++.
T Consensus 209 n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-- 280 (347)
T 4fmz_A 209 NQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI-- 280 (347)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--
T ss_pred CCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--
Confidence 55553322 4555566666666666653322 55566666666666666543 3455566666666666666532
Q ss_pred ccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCC
Q 046036 237 PFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNG 301 (614)
Q Consensus 237 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~ 301 (614)
+.+..+++|+.|++++|++++..|..+..+++|+.|++++|++++..| ...+++++.+++.+|+
T Consensus 281 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQV 344 (347)
T ss_dssp GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC-
T ss_pred hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhc
Confidence 345556666666666666665555556666666666666666665544 4555566666666554
No 34
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=8.6e-32 Score=281.24 Aligned_cols=269 Identities=22% Similarity=0.165 Sum_probs=216.1
Q ss_pred CCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCC
Q 046036 9 NLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFN 88 (614)
Q Consensus 9 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~ 88 (614)
.+++++.|++++|.++...+..|..+++|++|+|++|.+++..+.. |.+++ +|++|+|++|.+++..|..|.++++
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~---~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~ 118 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYA---FAYAH-TIQKLYMGFNAIRYLPPHVFQNVPL 118 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTT---TTTCT-TCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhh---ccCCC-CcCEEECCCCCCCcCCHHHhcCCCC
Confidence 4689999999999999776667899999999999999999877777 77787 9999999999999888888999999
Q ss_pred CCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCC
Q 046036 89 LIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSG 168 (614)
Q Consensus 89 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 168 (614)
|++|+|++|.++...+..|+++++|++|+ |++|++++..+..|..+++|++|++++|++++.. +.
T Consensus 119 L~~L~L~~n~l~~l~~~~~~~l~~L~~L~------------L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~ 183 (390)
T 3o6n_A 119 LTVLVLERNDLSSLPRGIFHNTPKLTTLS------------MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LS 183 (390)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEE------------CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GG
T ss_pred CCEEECCCCccCcCCHHHhcCCCCCcEEE------------CCCCccCccChhhccCCCCCCEEECCCCcCCccc---cc
Confidence 99999999999965555679999999888 8888888777777888888888888888877432 33
Q ss_pred CCCCC-------------------CEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCc
Q 046036 169 LFSTL-------------------SSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGN 229 (614)
Q Consensus 169 ~l~~L-------------------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N 229 (614)
.+++| ++|++++|.++.. |. ...++|+.|++++|.+++. ..+..+++|++|+|++|
T Consensus 184 ~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n 258 (390)
T 3o6n_A 184 LIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYN 258 (390)
T ss_dssp GCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSS
T ss_pred cccccceeecccccccccCCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCC
Confidence 34444 4555555555422 22 2246788888888888764 56778888888888888
Q ss_pred cccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCC
Q 046036 230 MFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGK 302 (614)
Q Consensus 230 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~ 302 (614)
.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|++++|++++.++....+++++.+++.+|+.
T Consensus 259 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~N~i 330 (390)
T 3o6n_A 259 ELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSI 330 (390)
T ss_dssp CCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCC
T ss_pred cCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcceecCccccccCcCCEEECCCCcc
Confidence 8888878888888888888888888885 56666778888888888888887666667788888888888864
No 35
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.7e-31 Score=291.82 Aligned_cols=163 Identities=17% Similarity=0.182 Sum_probs=148.1
Q ss_pred ccceEecCCCccccccchhhhccCCCCeeecccccCCCCCC-CCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceecc
Q 046036 124 YSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIP-KPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDF 202 (614)
Q Consensus 124 ~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 202 (614)
++++|++++|.+++..+. +..+++|++|++++|.+.+..| ..+..+++|++|++++|.+++..|..+..+++|+.|++
T Consensus 374 ~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 452 (570)
T 2z63_A 374 SLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 452 (570)
T ss_dssp CCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEEC
Confidence 456677777777755444 9999999999999999997766 56889999999999999999999999999999999999
Q ss_pred CCccCC-CCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcc
Q 046036 203 SEHMLS-DEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEG 281 (614)
Q Consensus 203 s~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 281 (614)
++|.++ +.+|..+..+++|+.|+|++|++++..|..|..+++|+.|++++|++++..|..|..+++|+.|++++|++++
T Consensus 453 ~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 453 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccC
Confidence 999998 5789999999999999999999999889999999999999999999999888899999999999999999999
Q ss_pred cCCCcc
Q 046036 282 QLPSMS 287 (614)
Q Consensus 282 ~~p~~~ 287 (614)
.+|..+
T Consensus 533 ~~~~~~ 538 (570)
T 2z63_A 533 SCPRID 538 (570)
T ss_dssp CTTTTH
T ss_pred CCcchH
Confidence 988654
No 36
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=6.1e-32 Score=272.65 Aligned_cols=252 Identities=23% Similarity=0.237 Sum_probs=217.4
Q ss_pred CCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCccccc--CCCCCcCCCCCC
Q 046036 13 LQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGD--IPAGIPKYFNLI 90 (614)
Q Consensus 13 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~--~p~~~~~l~~L~ 90 (614)
-+.++.+++.++ .+|..+. ++|++|+|++|+++...+.. |.+++ +|++|+|++|.++.. .|..+..+++|+
T Consensus 9 ~~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~---~~~l~-~L~~L~L~~n~l~~~~~~~~~~~~~~~L~ 81 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGV---FDKLT-QLTKLSLSSNGLSFKGCCSQSDFGTTSLK 81 (306)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTT---TTTCT-TCSEEECCSSCCCEEEEEEHHHHSCSCCC
T ss_pred CCEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhH---hhccc-cCCEEECCCCccCcccCcccccccccccC
Confidence 367889999998 6676554 68999999999998444444 67777 899999999998733 356677889999
Q ss_pred EEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccc-hhhhccCCCCeeecccccCCCCCCCCCCC
Q 046036 91 QLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIP-ESLENLTSLQILNLSCNHLGGSIPKPSGL 169 (614)
Q Consensus 91 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 169 (614)
+|+|++|.++ .+|..+..+++|++|+ +++|++++..+ ..+..+++|++|++++|.+.+..+..+..
T Consensus 82 ~L~Ls~n~i~-~l~~~~~~l~~L~~L~------------l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 148 (306)
T 2z66_A 82 YLDLSFNGVI-TMSSNFLGLEQLEHLD------------FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148 (306)
T ss_dssp EEECCSCSEE-EEEEEEETCTTCCEEE------------CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT
T ss_pred EEECCCCccc-cChhhcCCCCCCCEEE------------CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc
Confidence 9999999998 5777788889988887 99999987665 67899999999999999999888888999
Q ss_pred CCCCCEEEcCCCCCcc-CCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceE
Q 046036 170 FSTLSSIDFAHNNFNG-SLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDL 248 (614)
Q Consensus 170 l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 248 (614)
+++|++|++++|.+++ ..|..+..+++|++|++++|.+++..|..|..+++|+.|+|++|.+++..+..+..+++|+.|
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 9999999999999986 578889999999999999999998888899999999999999999998777789999999999
Q ss_pred EccCCcCcccCCcccCCCC-CCCEEECcCCcCcccCC
Q 046036 249 NLSHNNLSGTIPKELETLP-FLENLNLSFNNFEGQLP 284 (614)
Q Consensus 249 ~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p 284 (614)
+|++|++++..|..+..++ +|+.|++++|++++..+
T Consensus 229 ~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 229 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp ECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred ECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 9999999999999999985 89999999999987654
No 37
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=3.2e-32 Score=297.80 Aligned_cols=177 Identities=18% Similarity=0.196 Sum_probs=135.8
Q ss_pred CCCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 2 NVPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 2 ~ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
+||+.+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|.. |.+++ +|++|+|++|++++..|.
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~---~~~l~-~L~~L~Ls~n~l~~~~~~ 92 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDA---FYSLG-SLEHLDLSDNHLSSLSSS 92 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTT---TTTCT-TCCEEECTTSCCCSCCHH
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhh---ccccc-cCCEEECCCCccCccCHH
Confidence 4777664 79999999999999999999999999999999999999888888 77787 999999999999977777
Q ss_pred CCcCCCCCCEEeccCCcCccc-CCccccCCCCCCcccccccc---------c----ccceEecCCCccccccchhhhccC
Q 046036 82 GIPKYFNLIQLGLDRNCLAGS-IPFSIGKLQNLQKLNPLATS---------L----YSFQLNLAENNLTGNIPESLENLT 147 (614)
Q Consensus 82 ~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~~~---------~----~l~~L~L~~N~l~~~~~~~~~~l~ 147 (614)
.|+++++|++|+|++|.+++. .|..++++++|++|++..+. + ++++|++++|++++..|..+..++
T Consensus 93 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~ 172 (549)
T 2z81_A 93 WFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIR 172 (549)
T ss_dssp HHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCS
T ss_pred HhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccc
Confidence 799999999999999999863 57789999999999852211 1 345555666666555555555566
Q ss_pred CCCeeecccccCCCCCCCC-CCCCCCCCEEEcCCCCCcc
Q 046036 148 SLQILNLSCNHLGGSIPKP-SGLFSTLSSIDFAHNNFNG 185 (614)
Q Consensus 148 ~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~ 185 (614)
+|++|++++|.+. .+|.. +..+++|++|++++|.+++
T Consensus 173 ~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 173 DIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp EEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTT
T ss_pred cCceEecccCccc-ccchhhHhhcccccEEEccCCcccc
Confidence 6666666655554 22222 2345667777777776665
No 38
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.9e-30 Score=276.40 Aligned_cols=250 Identities=22% Similarity=0.257 Sum_probs=154.6
Q ss_pred CCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEE
Q 046036 13 LQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQL 92 (614)
Q Consensus 13 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 92 (614)
...++.+++.++ .+|..+. ++|++|+|++|+|++..|.. |.+++ +|++|+|++|++++..|..|.++++|++|
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~---~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 128 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADT---FRHLH-HLEVLQLGRNSIRQIEVGAFNGLASLNTL 128 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTT---TTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHH---cCCCC-CCCEEECCCCccCCcChhhccCcccCCEE
Confidence 345666666666 4554443 45666666666666655555 45555 66666666666666556666666666666
Q ss_pred eccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccc-cCCCCCCCCCCCCC
Q 046036 93 GLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCN-HLGGSIPKPSGLFS 171 (614)
Q Consensus 93 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~ 171 (614)
+|++|++++..+..|..+++|++|+ |++|+|+...+..|.++++|++|+|++| .+....+..+..++
T Consensus 129 ~L~~n~l~~~~~~~~~~l~~L~~L~------------L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~ 196 (452)
T 3zyi_A 129 ELFDNWLTVIPSGAFEYLSKLRELW------------LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLF 196 (452)
T ss_dssp ECCSSCCSBCCTTTSSSCTTCCEEE------------CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCT
T ss_pred ECCCCcCCccChhhhcccCCCCEEE------------CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCC
Confidence 6666666655555566666666555 6666666555556666666666666663 33322333466666
Q ss_pred CCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEcc
Q 046036 172 TLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLS 251 (614)
Q Consensus 172 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 251 (614)
+|++|+|++|.+++ +| .+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..+..|..+++|+.|+|+
T Consensus 197 ~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 274 (452)
T 3zyi_A 197 NLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLA 274 (452)
T ss_dssp TCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECC
Confidence 66666666666663 23 35566666666666666666666666666666666666666666666666666666666666
Q ss_pred CCcCcccCCcccCCCCCCCEEECcCCcCcccC
Q 046036 252 HNNLSGTIPKELETLPFLENLNLSFNNFEGQL 283 (614)
Q Consensus 252 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 283 (614)
+|+|++..+..|..+++|+.|++++|++.+..
T Consensus 275 ~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 275 HNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp SSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 66666555555666666666666666665543
No 39
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=4.7e-32 Score=279.21 Aligned_cols=277 Identities=18% Similarity=0.115 Sum_probs=166.9
Q ss_pred CCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCC
Q 046036 10 LFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNL 89 (614)
Q Consensus 10 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L 89 (614)
++.....++++|.++ .+|..+. ++|++|+|++|++++..+.. |.+++ +|++|+|++|++++..|..|.++++|
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~---~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L 102 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSD---LQRCV-NLQALVLTSNGINTIEEDSFSSLGSL 102 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTT---TTTCT-TCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHH---hccCC-CCCEEECCCCccCccCHhhcCCCCCC
Confidence 444455666666666 4555443 36667777777666554445 55555 66667777776666556666666677
Q ss_pred CEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccc-hhhhccCCCCeeecccc-cCCCCCCCCC
Q 046036 90 IQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIP-ESLENLTSLQILNLSCN-HLGGSIPKPS 167 (614)
Q Consensus 90 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~p~~~ 167 (614)
++|+|++|++++..+..|+++++|++|+ |++|++++..+ ..|..+++|++|++++| .+.+..+..+
T Consensus 103 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~------------L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 170 (353)
T 2z80_A 103 EHLDLSYNYLSNLSSSWFKPLSSLTFLN------------LLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDF 170 (353)
T ss_dssp CEEECCSSCCSSCCHHHHTTCTTCSEEE------------CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTT
T ss_pred CEEECCCCcCCcCCHhHhCCCccCCEEE------------CCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHc
Confidence 7777777766644444466666666665 66666664333 35666666777777666 3554445566
Q ss_pred CCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCcccc---CCCc
Q 046036 168 GLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFG---SFKG 244 (614)
Q Consensus 168 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~ 244 (614)
..+++|++|++++|.+++..|..+..+++|++|++++|.++...+..+..+++|+.|++++|.+++..+..+. ....
T Consensus 171 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~ 250 (353)
T 2z80_A 171 AGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSL 250 (353)
T ss_dssp TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCC
T ss_pred cCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccch
Confidence 6666666677776666666666666666666777766666544333344566666666776666654443322 2345
Q ss_pred cceEEccCCcCcc----cCCcccCCCCCCCEEECcCCcCcccCCCc-cccCCCceEEEecCCCccc
Q 046036 245 TIDLNLSHNNLSG----TIPKELETLPFLENLNLSFNNFEGQLPSM-SVFTNTSVISIVGNGKLCG 305 (614)
Q Consensus 245 L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~l~~~~~~~N~~~c~ 305 (614)
++.++|+++.+++ .+|..+..+++|+.|++++|+++..++.. ..+++++.+++.+|++.|.
T Consensus 251 l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 251 IKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 5566666666554 24555666666666666666666443332 4556666666666666553
No 40
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=6.2e-31 Score=285.55 Aligned_cols=276 Identities=22% Similarity=0.211 Sum_probs=228.9
Q ss_pred CeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEe
Q 046036 14 QNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLG 93 (614)
Q Consensus 14 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 93 (614)
++|++++|.++ .+|..+. ++|++|+|++|.+++..|.. |.+++ +|++|+|++|++++..|..|.++++|++|+
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~---~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 75 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSD---ILSLS-KLRILIISHNRIQYLDISVFKFNQELEYLD 75 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHH---HTTCT-TCCEEECCSSCCCEEEGGGGTTCTTCCEEE
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhh---ccccc-cccEEecCCCccCCcChHHhhcccCCCEEe
Confidence 58999999999 6787776 89999999999999777666 77887 999999999999988899999999999999
Q ss_pred ccCCcCcccCCccccCCCCCCcccccc---------ccc----ccceEecCCCccccccchhhhccCCC--Ceeeccccc
Q 046036 94 LDRNCLAGSIPFSIGKLQNLQKLNPLA---------TSL----YSFQLNLAENNLTGNIPESLENLTSL--QILNLSCNH 158 (614)
Q Consensus 94 L~~N~l~~~~p~~~~~l~~L~~L~l~~---------~~~----~l~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N~ 158 (614)
|++|+++ .+|.. .+++|++|++.. ..+ ++++|+|++|++++ ..|..+++| ++|++++|.
T Consensus 76 Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~ 149 (520)
T 2z7x_B 76 LSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGE 149 (520)
T ss_dssp CCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECT
T ss_pred cCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccc
Confidence 9999999 56665 899999998621 222 56677777777664 345666666 777777777
Q ss_pred C--CCCCCCCCCCCC-----------------------------------------------------------------
Q 046036 159 L--GGSIPKPSGLFS----------------------------------------------------------------- 171 (614)
Q Consensus 159 l--~~~~p~~~~~l~----------------------------------------------------------------- 171 (614)
+ .+..|..+..+.
T Consensus 150 l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~ 229 (520)
T 2z7x_B 150 TYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNN 229 (520)
T ss_dssp TTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEE
T ss_pred ccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccc
Confidence 7 556666665533
Q ss_pred ------------------CCCEEEcCCCCCccCCcccc------------------------------------------
Q 046036 172 ------------------TLSSIDFAHNNFNGSLPLEV------------------------------------------ 191 (614)
Q Consensus 172 ------------------~L~~L~Ls~N~l~~~~~~~~------------------------------------------ 191 (614)
+|++|++++|.+++.+|..+
T Consensus 230 ~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l 309 (520)
T 2z7x_B 230 IETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTV 309 (520)
T ss_dssp EEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEE
T ss_pred cccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEc
Confidence 78888888888887777655
Q ss_pred -----------cCCCCCceeccCCccCCCCccccccCcccchHHhccCccccc--cCCccccCCCccceEEccCCcCccc
Q 046036 192 -----------GSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQG--RIPPFFGSFKGTIDLNLSHNNLSGT 258 (614)
Q Consensus 192 -----------~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~ 258 (614)
..+++|++|++++|.+++..|..+..+++|++|+|++|++++ .+|..++.+++|++|++++|++++.
T Consensus 310 ~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~ 389 (520)
T 2z7x_B 310 SGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYD 389 (520)
T ss_dssp ESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCC
T ss_pred CCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcc
Confidence 677899999999999999899999999999999999999986 5667899999999999999999985
Q ss_pred CCc-ccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCCc
Q 046036 259 IPK-ELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGKL 303 (614)
Q Consensus 259 ~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~ 303 (614)
+|. .+..+++|+.|++++|++++.+|... .++++.+++.+|...
T Consensus 390 l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l-~~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 390 EKKGDCSWTKSLLSLNMSSNILTDTIFRCL-PPRIKVLDLHSNKIK 434 (520)
T ss_dssp GGGCSCCCCTTCCEEECCSSCCCGGGGGSC-CTTCCEEECCSSCCC
T ss_pred cccchhccCccCCEEECcCCCCCcchhhhh-cccCCEEECCCCccc
Confidence 665 58889999999999999988766432 278999999999654
No 41
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=2.2e-30 Score=274.90 Aligned_cols=247 Identities=21% Similarity=0.198 Sum_probs=121.9
Q ss_pred CcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcc
Q 046036 37 LTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKL 116 (614)
Q Consensus 37 L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 116 (614)
.+.++.+++.++ .+|..+ . .+++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|
T Consensus 45 ~~~v~c~~~~l~-~iP~~~---~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L 117 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGI---S---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 117 (440)
T ss_dssp SCEEECCSCCCS-SCCSCC---C---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEE
T ss_pred CCEEEeCCCCcC-cCCCCC---C---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEE
Confidence 344555555554 344331 1 144555555555554444455555555555555555554444455555555544
Q ss_pred cccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCC-CCccCCcccccCCC
Q 046036 117 NPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHN-NFNGSLPLEVGSLS 195 (614)
Q Consensus 117 ~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~ 195 (614)
+ |++|+|+...+..|..+++|++|+|++|+++...+..+..+++|++|+|++| .++...+..|.+++
T Consensus 118 ~------------L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~ 185 (440)
T 3zyj_A 118 E------------LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS 185 (440)
T ss_dssp E------------CCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCS
T ss_pred E------------CCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhccc
Confidence 4 5555555444444555555555555555555444444555555555555552 22222223445555
Q ss_pred CCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECc
Q 046036 196 NTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLS 275 (614)
Q Consensus 196 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 275 (614)
+|++|+|++|.++.. | .+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|+
T Consensus 186 ~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 263 (440)
T 3zyj_A 186 NLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLA 263 (440)
T ss_dssp SCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECT
T ss_pred ccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECC
Confidence 555555555555422 2 24455555555555555554445555555555555555555555555555555555555555
Q ss_pred CCcCcccCCC-ccccCCCceEEEecCCCcc
Q 046036 276 FNNFEGQLPS-MSVFTNTSVISIVGNGKLC 304 (614)
Q Consensus 276 ~N~l~~~~p~-~~~~~~l~~~~~~~N~~~c 304 (614)
+|++++..+. +..+++++.+++.+||+.|
T Consensus 264 ~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 264 HNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp TSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 5555544433 2334455555555555555
No 42
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.97 E-value=4.6e-32 Score=269.85 Aligned_cols=175 Identities=21% Similarity=0.328 Sum_probs=124.8
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
++..+||||||++|||.++|+.. ...++|.++++|+.|+ |+|||||+++.+||+|||+|+
T Consensus 103 ~~~~~iVmEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 180 (307)
T 3omv_A 103 KDNLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT 180 (307)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCB
T ss_pred CCeEEEEEEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCce
Confidence 45689999999999999999864 2469999999999888 999999999999999999999
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc-----cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-----VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-----~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
........ ......+||+.||| |+ ...++.|+|||||||++|||+||+.||.+....
T Consensus 181 ~~~~~~~~-----~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------------ 243 (307)
T 3omv_A 181 VKSRWSGS-----QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------------ 243 (307)
T ss_dssp C-----------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------------
T ss_pred ecccCCcc-----eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------------
Confidence 77543221 23455789999988 87 235899999999999999999999999753221
Q ss_pred CCChHHHHHHHHhcCc-CCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 529 PESVMELVYSRLLQGV-DKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
+.+...+.... .+.....+ .++...+.+++..||+.+|++||||.||++.|+.++..+
T Consensus 244 -----~~~~~~~~~~~~~p~~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 244 -----DQIIFMVGRGYASPDLSKLY------KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -----HHHHHHHHTTCCCCCSTTSC------TTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -----HHHHHHHhcCCCCCCccccc------ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 11111111111 11111000 122234556788999999999999999999998876543
No 43
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=5.9e-31 Score=267.61 Aligned_cols=236 Identities=17% Similarity=0.207 Sum_probs=164.5
Q ss_pred CCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCC
Q 046036 10 LFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNL 89 (614)
Q Consensus 10 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L 89 (614)
.++++.|+|++|.++ .+|..++.+++|++|+|++|.++ .+|.. +.+++ +|++|+|++|.++ .+|..+.++++|
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~---~~~l~-~L~~L~Ls~n~l~-~lp~~l~~l~~L 152 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDT---MQQFA-GLETLTLARNPLR-ALPASIASLNRL 152 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSC---GGGGT-TCSEEEEESCCCC-CCCGGGGGCTTC
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHH---HhccC-CCCEEECCCCccc-cCcHHHhcCcCC
Confidence 356667777777766 55666666667777777777666 56665 45555 6666777777666 566666666677
Q ss_pred CEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCC
Q 046036 90 IQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGL 169 (614)
Q Consensus 90 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 169 (614)
++|+|++|++.+.+|..++.. ..+..|..+++|++|+|++|+++ .+|..++.
T Consensus 153 ~~L~L~~n~~~~~~p~~~~~~---------------------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~ 204 (328)
T 4fcg_A 153 RELSIRACPELTELPEPLAST---------------------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIAN 204 (328)
T ss_dssp CEEEEEEETTCCCCCSCSEEE---------------------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGG
T ss_pred CEEECCCCCCccccChhHhhc---------------------------cchhhhccCCCCCEEECcCCCcC-cchHhhcC
Confidence 777776666666666544320 01112445777777777777777 66666777
Q ss_pred CCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEE
Q 046036 170 FSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLN 249 (614)
Q Consensus 170 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 249 (614)
+++|++|+|++|.+++ +|..+..+++|++|++++|.+.+.+|..|+.+++|+.|+|++|.+.+.+|..+..+++|+.|+
T Consensus 205 l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~ 283 (328)
T 4fcg_A 205 LQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLD 283 (328)
T ss_dssp CTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEE
T ss_pred CCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEe
Confidence 7777777777777773 555677777777777777777777777777777777777777777777787788888888888
Q ss_pred ccCCcCcccCCcccCCCCCCCEEECcCCcCcc
Q 046036 250 LSHNNLSGTIPKELETLPFLENLNLSFNNFEG 281 (614)
Q Consensus 250 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 281 (614)
|++|++.+.+|..+..+++|+.+++..|.+..
T Consensus 284 L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 284 LRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred CCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 88888888888888888888888887776653
No 44
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=2.8e-30 Score=282.95 Aligned_cols=280 Identities=17% Similarity=0.170 Sum_probs=224.8
Q ss_pred CCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCC
Q 046036 10 LFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNL 89 (614)
Q Consensus 10 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L 89 (614)
+...+++++++|.+++ +|..+. ++|++|+|++|.+++..|.. |.+++ +|++|+|++|++++..|..|.++++|
T Consensus 30 ~~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~---~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L 102 (562)
T 3a79_B 30 NELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPD---ISFLS-ELRVLRLSHNRIRSLDFHVFLFNQDL 102 (562)
T ss_dssp ---CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGG---TTTCT-TCCEEECCSCCCCEECTTTTTTCTTC
T ss_pred cCCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhh---hccCC-CccEEECCCCCCCcCCHHHhCCCCCC
Confidence 3455899999999995 777665 79999999999999777777 77887 99999999999998889999999999
Q ss_pred CEEeccCCcCcccCCccccCCCCCCcccccc---------ccc----ccceEecCCCccccccchhhhccCCC--Ceeec
Q 046036 90 IQLGLDRNCLAGSIPFSIGKLQNLQKLNPLA---------TSL----YSFQLNLAENNLTGNIPESLENLTSL--QILNL 154 (614)
Q Consensus 90 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~---------~~~----~l~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L 154 (614)
++|+|++|+++ .+|.. .+++|++|++.. ..+ ++++|+|++|++++. .+..+++| ++|++
T Consensus 103 ~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L 176 (562)
T 3a79_B 103 EYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILL 176 (562)
T ss_dssp CEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEE
T ss_pred CEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEe
Confidence 99999999999 56665 899999998611 122 566667777766642 34444444 77777
Q ss_pred ccccC--CCCCCCCCCCCC-------------------------------------------------------------
Q 046036 155 SCNHL--GGSIPKPSGLFS------------------------------------------------------------- 171 (614)
Q Consensus 155 ~~N~l--~~~~p~~~~~l~------------------------------------------------------------- 171 (614)
++|.+ ++..|..+..+.
T Consensus 177 ~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L 256 (562)
T 3a79_B 177 DLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTL 256 (562)
T ss_dssp EESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEE
T ss_pred ecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEe
Confidence 77766 555555444332
Q ss_pred --------------------CCCEEEcCCCCCccCCcccc----------------------------------------
Q 046036 172 --------------------TLSSIDFAHNNFNGSLPLEV---------------------------------------- 191 (614)
Q Consensus 172 --------------------~L~~L~Ls~N~l~~~~~~~~---------------------------------------- 191 (614)
+|++|++++|.+++.+|..+
T Consensus 257 ~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L 336 (562)
T 3a79_B 257 QHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKML 336 (562)
T ss_dssp EEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEE
T ss_pred cCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEE
Confidence 67788888888888777655
Q ss_pred -------------cCCCCCceeccCCccCCCCccccccCcccchHHhccCcccccc--CCccccCCCccceEEccCCcCc
Q 046036 192 -------------GSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGR--IPPFFGSFKGTIDLNLSHNNLS 256 (614)
Q Consensus 192 -------------~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~ 256 (614)
..+++|++|++++|.+++..|..+..+++|+.|+|++|++++. +|..+..+++|+.|++++|+++
T Consensus 337 ~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~ 416 (562)
T 3a79_B 337 SISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN 416 (562)
T ss_dssp EEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCB
T ss_pred EccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCC
Confidence 6788999999999999999999999999999999999999963 3467899999999999999999
Q ss_pred ccCC-cccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCCc
Q 046036 257 GTIP-KELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGKL 303 (614)
Q Consensus 257 ~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~ 303 (614)
+.+| ..+..+++|+.|++++|++++.+|.... ++++.+++.+|...
T Consensus 417 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 417 SHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP-PKVKVLDLHNNRIM 463 (562)
T ss_dssp SCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC-TTCSEEECCSSCCC
T ss_pred CccChhhhcCcccCCEEECCCCCCCcchhhhhc-CcCCEEECCCCcCc
Confidence 8455 4688999999999999999987765322 78999999999643
No 45
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=3e-30 Score=275.91 Aligned_cols=273 Identities=25% Similarity=0.341 Sum_probs=152.6
Q ss_pred cccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcC
Q 046036 6 EIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPK 85 (614)
Q Consensus 6 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~ 85 (614)
.+..+++|++|+|++|.+++..| |+++++|++|++++|.+++..| +.+++ +|++|+|++|.+++. +. +.+
T Consensus 63 ~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-----~~~l~-~L~~L~L~~n~l~~~-~~-~~~ 132 (466)
T 1o6v_A 63 GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP-----LANLT-NLTGLTLFNNQITDI-DP-LKN 132 (466)
T ss_dssp TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-----GTTCT-TCCEEECCSSCCCCC-GG-GTT
T ss_pred chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh-----hcCCC-CCCEEECCCCCCCCC-hH-HcC
Confidence 36667777778887777775443 7777777777777777774332 45555 677777777777643 22 666
Q ss_pred CCCCCEEeccCCcCcccCC-------------------ccccCCCCCCccccccccc----------ccceEecCCCccc
Q 046036 86 YFNLIQLGLDRNCLAGSIP-------------------FSIGKLQNLQKLNPLATSL----------YSFQLNLAENNLT 136 (614)
Q Consensus 86 l~~L~~L~L~~N~l~~~~p-------------------~~~~~l~~L~~L~l~~~~~----------~l~~L~L~~N~l~ 136 (614)
+++|++|++++|.+++... ..+.++++|+.|++..+.+ +++.|++++|.++
T Consensus 133 l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~ 212 (466)
T 1o6v_A 133 LTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQIS 212 (466)
T ss_dssp CTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCC
T ss_pred CCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCChhhccCCCCCEEEecCCccc
Confidence 6667777666666653211 1134444555555422211 4556666666666
Q ss_pred cccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCcccccc
Q 046036 137 GNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLG 216 (614)
Q Consensus 137 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 216 (614)
+..| +..+++|++|++++|++++ + ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +.
T Consensus 213 ~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~ 284 (466)
T 1o6v_A 213 DITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LA 284 (466)
T ss_dssp CCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GT
T ss_pred cccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--cc
Confidence 4443 5555666666666666553 2 234555566666666666654333 5555556666666665554333 55
Q ss_pred CcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEE
Q 046036 217 NRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVIS 296 (614)
Q Consensus 217 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~ 296 (614)
.+++|+.|++++|.+++..+ +..+++|+.|++++|++++..| +..+++|+.|++++|.+++. +....+++++.++
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~ 359 (466)
T 1o6v_A 285 GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLS 359 (466)
T ss_dssp TCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEE
T ss_pred CCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEe
Confidence 55555555555555553322 4555555555555555554433 44555555555555555543 3344444555555
Q ss_pred EecCC
Q 046036 297 IVGNG 301 (614)
Q Consensus 297 ~~~N~ 301 (614)
+.+|.
T Consensus 360 l~~n~ 364 (466)
T 1o6v_A 360 AGHNQ 364 (466)
T ss_dssp CCSSC
T ss_pred CCCCc
Confidence 55543
No 46
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=273.90 Aligned_cols=266 Identities=20% Similarity=0.197 Sum_probs=225.9
Q ss_pred CCCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 2 NVPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 2 ~ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
+||..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|.. |.+++ +|++|+|++|++++..+.
T Consensus 45 ~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~---~~~l~-~L~~L~Ls~n~l~~~~~~ 118 (353)
T 2z80_A 45 SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDS---FSSLG-SLEHLDLSYNYLSNLSSS 118 (353)
T ss_dssp SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTT---TTTCT-TCCEEECCSSCCSSCCHH
T ss_pred ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhh---cCCCC-CCCEEECCCCcCCcCCHh
Confidence 4677664 58999999999999888889999999999999999999888887 77787 999999999999965555
Q ss_pred CCcCCCCCCEEeccCCcCcccCC-ccccCCCCCCcccccccccccceEecCCC-ccccccchhhhccCCCCeeecccccC
Q 046036 82 GIPKYFNLIQLGLDRNCLAGSIP-FSIGKLQNLQKLNPLATSLYSFQLNLAEN-NLTGNIPESLENLTSLQILNLSCNHL 159 (614)
Q Consensus 82 ~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~~~~~l~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l 159 (614)
.|.++++|++|+|++|++++..+ ..+..+++|++|+ +++| .++...+..|.++++|++|++++|++
T Consensus 119 ~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~------------l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 119 WFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILR------------VGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp HHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEE------------EEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred HhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEE------------CCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 58999999999999999995444 4789999999888 9999 47777788999999999999999999
Q ss_pred CCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCcccccc---CcccchHHhccCccccc---
Q 046036 160 GGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLG---NRSKFEHLLLGGNMFQG--- 233 (614)
Q Consensus 160 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~~--- 233 (614)
++..|..+..+++|++|++++|.++...+..+..+++|+.|++++|.+++..+..+. ....++.++|+++.+.+
T Consensus 187 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l 266 (353)
T 2z80_A 187 QSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESL 266 (353)
T ss_dssp CEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHH
T ss_pred CccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcch
Confidence 988899999999999999999999754444456689999999999999986655443 34556677777777664
Q ss_pred -cCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCC
Q 046036 234 -RIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPS 285 (614)
Q Consensus 234 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 285 (614)
.+|.++..+++|+.|+|++|+++...+..|..+++|+.|++++|++++.+|.
T Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 267 FQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp HHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred hhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 4778899999999999999999954444468999999999999999998764
No 47
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=3.9e-30 Score=286.08 Aligned_cols=142 Identities=24% Similarity=0.243 Sum_probs=127.4
Q ss_pred hhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCc-cCCcccccCCCCCceeccCCccCCCCccccccCcccc
Q 046036 143 LENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFN-GSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKF 221 (614)
Q Consensus 143 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 221 (614)
|..+++|+.++++.|.+.+..+..+..+++|+.|++++|.+. +..|..|..+++|++|+|++|++++..|..|.++++|
T Consensus 441 ~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L 520 (635)
T 4g8a_A 441 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 520 (635)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCC
Confidence 445566666777777787777888889999999999999854 4678889999999999999999999999999999999
Q ss_pred hHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCC-CCCCEEECcCCcCcccCC
Q 046036 222 EHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETL-PFLENLNLSFNNFEGQLP 284 (614)
Q Consensus 222 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ls~N~l~~~~p 284 (614)
++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+..+ ++|+.|++++|++++...
T Consensus 521 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 521 QVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999999999889999999999999999999999999999998 689999999999998754
No 48
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.5e-31 Score=269.77 Aligned_cols=238 Identities=20% Similarity=0.179 Sum_probs=213.7
Q ss_pred CCCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCccc--CCcChhhhccccccccEEEccCCcccccC
Q 046036 2 NVPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGI--IPPSLDSFTNLSTKLRILDAGGNQFAGDI 79 (614)
Q Consensus 2 ~ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~~~~l~~~L~~L~L~~N~l~~~~ 79 (614)
.+|..+ .++|++|+|++|.++...+..|.++++|++|+|++|.++.. .|.. +..++ +|++|+|++|.++ .+
T Consensus 21 ~ip~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~---~~~~~-~L~~L~Ls~n~i~-~l 93 (306)
T 2z66_A 21 SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQS---DFGTT-SLKYLDLSFNGVI-TM 93 (306)
T ss_dssp SCCSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHH---HHSCS-CCCEEECCSCSEE-EE
T ss_pred cCCCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccc---ccccc-ccCEEECCCCccc-cC
Confidence 466655 36899999999999976666789999999999999999843 2444 55676 9999999999998 57
Q ss_pred CCCCcCCCCCCEEeccCCcCcccCC-ccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeeccccc
Q 046036 80 PAGIPKYFNLIQLGLDRNCLAGSIP-FSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNH 158 (614)
Q Consensus 80 p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 158 (614)
|..+..+++|++|++++|.+++..+ ..+..+++|++|+ +++|.+++..+..|..+++|++|+|++|.
T Consensus 94 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~------------l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 94 SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD------------ISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp EEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEE------------CTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred hhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEE------------CCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 7779999999999999999996655 5788899998887 99999999999999999999999999999
Q ss_pred CCC-CCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCc
Q 046036 159 LGG-SIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPP 237 (614)
Q Consensus 159 l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 237 (614)
+++ .+|..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+++..+..+..+++|+.|+|++|.+++..|.
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 241 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 241 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSS
T ss_pred cccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHH
Confidence 986 5789999999999999999999988899999999999999999999988888899999999999999999999999
Q ss_pred cccCCC-ccceEEccCCcCccc
Q 046036 238 FFGSFK-GTIDLNLSHNNLSGT 258 (614)
Q Consensus 238 ~~~~l~-~L~~L~Ls~N~l~~~ 258 (614)
.+..++ +|++|+|++|++++.
T Consensus 242 ~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 242 ELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SCCCCCTTCCEEECTTCCEECS
T ss_pred HHHhhhccCCEEEccCCCeecc
Confidence 999985 999999999999864
No 49
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.97 E-value=3.3e-30 Score=275.63 Aligned_cols=268 Identities=26% Similarity=0.375 Sum_probs=197.6
Q ss_pred CCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCC
Q 046036 10 LFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNL 89 (614)
Q Consensus 10 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L 89 (614)
+++|+.|++++|.++. +| .+..+++|++|+|++|.+++..| +.+++ +|++|++++|.+++..+ +.++++|
T Consensus 45 l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~-----~~~l~-~L~~L~l~~n~l~~~~~--~~~l~~L 114 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP-----LKNLT-KLVDILMNNNQIADITP--LANLTNL 114 (466)
T ss_dssp HHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-----GTTCT-TCCEEECCSSCCCCCGG--GTTCTTC
T ss_pred hccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh-----hhccc-cCCEEECCCCccccChh--hcCCCCC
Confidence 5678888888888873 45 37778888888888888874432 55666 78888888888875444 7788888
Q ss_pred CEEeccCCcCcccCCccccCCCCCCccccccccc-------------------------------ccceEecCCCccccc
Q 046036 90 IQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL-------------------------------YSFQLNLAENNLTGN 138 (614)
Q Consensus 90 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~-------------------------------~l~~L~L~~N~l~~~ 138 (614)
++|+|++|.+++..+ +..+++|++|++..+.+ +++.|++++|.+++.
T Consensus 115 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 115 TGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp CEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC
T ss_pred CEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC
Confidence 888888888875433 77788888777621111 467788888887743
Q ss_pred cchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCc
Q 046036 139 IPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNR 218 (614)
Q Consensus 139 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 218 (614)
..+..+++|++|++++|.+.+..| ++.+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+
T Consensus 193 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 193 --SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred --hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 347778888888888888875544 66778888888888888743 357778888888888888876654 7778
Q ss_pred ccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEe
Q 046036 219 SKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIV 298 (614)
Q Consensus 219 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~ 298 (614)
++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| ...+++++.+++.
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~ 339 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFY 339 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECC
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECC
Confidence 888888888888875433 7778888888888888886544 6778888888888888887665 5677788888888
Q ss_pred cCCC
Q 046036 299 GNGK 302 (614)
Q Consensus 299 ~N~~ 302 (614)
+|..
T Consensus 340 ~n~l 343 (466)
T 1o6v_A 340 NNKV 343 (466)
T ss_dssp SSCC
T ss_pred CCcc
Confidence 7753
No 50
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.4e-30 Score=264.93 Aligned_cols=221 Identities=23% Similarity=0.315 Sum_probs=195.3
Q ss_pred cccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhh
Q 046036 64 KLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESL 143 (614)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~ 143 (614)
+++.|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..++.+++|++|+ |++|.++ .+|..|
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~------------Ls~n~l~-~lp~~l 146 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLT------------LARNPLR-ALPASI 146 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEE------------EESCCCC-CCCGGG
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEE------------CCCCccc-cCcHHH
Confidence 7788888888887 67777888888888888888888 7788888888888777 8888888 678888
Q ss_pred hccCCCCeeecccccCCCCCCCCCCC---------CCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCcccc
Q 046036 144 ENLTSLQILNLSCNHLGGSIPKPSGL---------FSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPIT 214 (614)
Q Consensus 144 ~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~ 214 (614)
.++++|++|+|++|++.+.+|..+.. +++|++|+|++|.++ .+|..++.+++|++|+|++|.+++ +|..
T Consensus 147 ~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~ 224 (328)
T 4fcg_A 147 ASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPA 224 (328)
T ss_dssp GGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGG
T ss_pred hcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchh
Confidence 88888888888888888788877654 999999999999999 889999999999999999999996 5667
Q ss_pred ccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCC-ccccCCCc
Q 046036 215 LGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPS-MSVFTNTS 293 (614)
Q Consensus 215 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~l~ 293 (614)
+..+++|++|+|++|.+.+.+|..++.+++|+.|+|++|++.+.+|..+..+++|+.|++++|++.+.+|. +..++++.
T Consensus 225 l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~ 304 (328)
T 4fcg_A 225 IHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANC 304 (328)
T ss_dssp GGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTC
T ss_pred hccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999998885 56788888
Q ss_pred eEEEecCC
Q 046036 294 VISIVGNG 301 (614)
Q Consensus 294 ~~~~~~N~ 301 (614)
.+.+..|.
T Consensus 305 ~l~l~~~~ 312 (328)
T 4fcg_A 305 IILVPPHL 312 (328)
T ss_dssp EEECCGGG
T ss_pred EEeCCHHH
Confidence 88877663
No 51
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=4.9e-30 Score=273.18 Aligned_cols=236 Identities=21% Similarity=0.223 Sum_probs=214.6
Q ss_pred CCCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 2 NVPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 2 ~ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
.||..+. ++|+.|+|++|+|++..|+.|.++++|++|+|++|+|++..|.. |.+++ +|++|+|++|++++..+.
T Consensus 68 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~---~~~l~-~L~~L~L~~n~l~~~~~~ 141 (452)
T 3zyi_A 68 EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGA---FNGLA-SLNTLELFDNWLTVIPSG 141 (452)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTT---TTTCT-TCCEEECCSSCCSBCCTT
T ss_pred ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhh---ccCcc-cCCEEECCCCcCCccChh
Confidence 4666553 68999999999999999999999999999999999999888888 77787 999999999999977777
Q ss_pred CCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCC-CccccccchhhhccCCCCeeecccccCC
Q 046036 82 GIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAE-NNLTGNIPESLENLTSLQILNLSCNHLG 160 (614)
Q Consensus 82 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 160 (614)
.|..+++|++|+|++|+++...+..|.++++|+.|+ |++ |.+....+..|..+++|++|+|++|+++
T Consensus 142 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~------------l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 209 (452)
T 3zyi_A 142 AFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD------------LGELKKLEYISEGAFEGLFNLKYLNLGMCNIK 209 (452)
T ss_dssp TSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE------------CCCCTTCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred hhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe------------CCCCCCccccChhhccCCCCCCEEECCCCccc
Confidence 799999999999999999987778999999999888 998 4555455567999999999999999999
Q ss_pred CCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCcccc
Q 046036 161 GSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFG 240 (614)
Q Consensus 161 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 240 (614)
+ +| .+..+++|+.|+|++|.|++..|..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..+..|.
T Consensus 210 ~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 210 D-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp S-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred c-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 4 45 488999999999999999999999999999999999999999999999999999999999999999988888899
Q ss_pred CCCccceEEccCCcCcc
Q 046036 241 SFKGTIDLNLSHNNLSG 257 (614)
Q Consensus 241 ~l~~L~~L~Ls~N~l~~ 257 (614)
.+++|+.|+|++|.+.-
T Consensus 288 ~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 288 PLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TCTTCCEEECCSSCEEC
T ss_pred cccCCCEEEccCCCcCC
Confidence 99999999999999873
No 52
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.7e-30 Score=259.29 Aligned_cols=251 Identities=20% Similarity=0.160 Sum_probs=167.2
Q ss_pred cEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCccc
Q 046036 38 TYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLN 117 (614)
Q Consensus 38 ~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 117 (614)
++++.+++.++ .+|.. + +++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|..+++|++|+
T Consensus 14 ~~~~c~~~~l~-~ip~~---~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 86 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVG---I---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLD 86 (285)
T ss_dssp CEEECCSSCCS-SCCTT---C---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred eEEEcCcCCcc-cCCcC---C---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEe
Confidence 45566666665 34433 1 12566666666666655555566666666666666666655566666666666555
Q ss_pred ccccccccceEecCCCc-cccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCC
Q 046036 118 PLATSLYSFQLNLAENN-LTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSN 196 (614)
Q Consensus 118 l~~~~~~l~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 196 (614)
|++|. ++...|..|..+++|++|+|++|.+++..|..+..+++|++|++++|.+++..+..|..+++
T Consensus 87 ------------l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 154 (285)
T 1ozn_A 87 ------------LSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGN 154 (285)
T ss_dssp ------------CCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred ------------CCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCC
Confidence 66665 55555666666666777777777666655666666677777777777776555555667777
Q ss_pred CceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcC
Q 046036 197 TQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSF 276 (614)
Q Consensus 197 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 276 (614)
|++|++++|.+++..+..|..+++|+.|+|++|.+++..|..|..+++|+.|++++|++++..+..+..+++|+.|++++
T Consensus 155 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 234 (285)
T 1ozn_A 155 LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 234 (285)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCS
T ss_pred ccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccC
Confidence 77777777777766556677777777777777777777788888888888888888888877667788888888999999
Q ss_pred CcCcccCCCccccCCCceEEEecCCCcccCC
Q 046036 277 NNFEGQLPSMSVFTNTSVISIVGNGKLCGGV 307 (614)
Q Consensus 277 N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~~ 307 (614)
|++.+..+..+....+.......+...|..+
T Consensus 235 N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 235 NPWVCDCRARPLWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp SCEECSGGGHHHHHHHHHCCSEECCCBEEES
T ss_pred CCccCCCCcHHHHHHHHhcccccCccccCCc
Confidence 8888765543333333334445666666644
No 53
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=4.9e-30 Score=272.18 Aligned_cols=252 Identities=23% Similarity=0.243 Sum_probs=227.2
Q ss_pred CCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCE
Q 046036 12 RLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQ 91 (614)
Q Consensus 12 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 91 (614)
..+.++.+++.++ .+|..+. ++++.|+|++|++++..+.. |.+++ +|++|+|++|.+++..+..|.++++|++
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~---~~~l~-~L~~L~Ls~n~i~~i~~~~~~~l~~L~~ 116 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNS---FKHLR-HLEILQLSRNHIRTIEIGAFNGLANLNT 116 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTT---TSSCS-SCCEEECCSSCCCEECGGGGTTCSSCCE
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHH---hhCCC-CCCEEECCCCcCCccChhhccCCccCCE
Confidence 4678999999999 6777665 68999999999999888877 77887 9999999999999888889999999999
Q ss_pred EeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccc-cCCCCCCCCCCCC
Q 046036 92 LGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCN-HLGGSIPKPSGLF 170 (614)
Q Consensus 92 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l 170 (614)
|+|++|+++...+..|..+++|++|+ |++|.|+...+..|..+++|++|+|++| .+....+..+..+
T Consensus 117 L~L~~n~l~~~~~~~~~~l~~L~~L~------------L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l 184 (440)
T 3zyj_A 117 LELFDNRLTTIPNGAFVYLSKLKELW------------LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGL 184 (440)
T ss_dssp EECCSSCCSSCCTTTSCSCSSCCEEE------------CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTC
T ss_pred EECCCCcCCeeCHhHhhccccCceee------------CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcc
Confidence 99999999977777899999999888 9999999888889999999999999995 4554445578899
Q ss_pred CCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEc
Q 046036 171 STLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNL 250 (614)
Q Consensus 171 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 250 (614)
++|++|+|++|.++ .+| .+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..+..|..+++|+.|+|
T Consensus 185 ~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 262 (440)
T 3zyj_A 185 SNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINL 262 (440)
T ss_dssp SSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEEC
T ss_pred cccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEEC
Confidence 99999999999998 555 4889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCcccCCcccCCCCCCCEEECcCCcCcccCC
Q 046036 251 SHNNLSGTIPKELETLPFLENLNLSFNNFEGQLP 284 (614)
Q Consensus 251 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 284 (614)
++|++++..+..|..+++|+.|+|++|++.+...
T Consensus 263 ~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 263 AHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred CCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 9999998888889999999999999999987654
No 54
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=2.8e-29 Score=266.59 Aligned_cols=266 Identities=21% Similarity=0.197 Sum_probs=132.2
Q ss_pred ccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCC
Q 046036 7 IGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKY 86 (614)
Q Consensus 7 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l 86 (614)
|+++++|++|+|++|++++. | ++.+++|++|+|++|++++. | +.+++ +|++|++++|++++ +| +..+
T Consensus 60 l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-----~~~l~-~L~~L~L~~N~l~~-l~--~~~l 126 (457)
T 3bz5_A 60 IEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-----VTPLT-KLTYLNCDTNKLTK-LD--VSQN 126 (457)
T ss_dssp GGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C-----CTTCT-TCCEEECCSSCCSC-CC--CTTC
T ss_pred hcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e-----cCCCC-cCCEEECCCCcCCe-ec--CCCC
Confidence 44444444444444444432 2 44444444444444444432 1 33343 45555555555543 22 4445
Q ss_pred CCCCEEeccCCcCcccCCccccCCCCCCcccccccc------c----ccceEecCCCccccccchhhhccCCCCeeeccc
Q 046036 87 FNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATS------L----YSFQLNLAENNLTGNIPESLENLTSLQILNLSC 156 (614)
Q Consensus 87 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~------~----~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 156 (614)
++|++|++++|++++. + ++.+++|++|++..+. + +++.|++++|++++ +| +..+++|+.|++++
T Consensus 127 ~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~ 200 (457)
T 3bz5_A 127 PLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDT 200 (457)
T ss_dssp TTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCS
T ss_pred CcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcC
Confidence 5555555555555432 1 4445555555442221 0 44555555555554 22 45555555555555
Q ss_pred ccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcc-------cchHHhccCc
Q 046036 157 NHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRS-------KFEHLLLGGN 229 (614)
Q Consensus 157 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~-------~L~~L~L~~N 229 (614)
|++++. .++.+++|+.|++++|++++ +| ++.+++|+.|++++|++++..+..+..+. +|+.|++++|
T Consensus 201 N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n 274 (457)
T 3bz5_A 201 NNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHN 274 (457)
T ss_dssp SCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTC
T ss_pred CcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCC
Confidence 555532 24555555555555555554 33 45555555555555555554443443333 3444555555
Q ss_pred cccccCCccccCCCccceEEccCCcCcccCCc--------ccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCC
Q 046036 230 MFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPK--------ELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNG 301 (614)
Q Consensus 230 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--------~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~ 301 (614)
.+.+.+| ++.+++|+.|++++|.+.+.+|. .+..+++|+.|++++|++++. + +..+++++.+++.+|.
T Consensus 275 ~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~-l~~l~~L~~L~l~~N~ 350 (457)
T 3bz5_A 275 TQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D-VSHNTKLKSLSCVNAH 350 (457)
T ss_dssp TTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C-CTTCTTCSEEECCSSC
T ss_pred ccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c-cccCCcCcEEECCCCC
Confidence 5444443 34456666666666655444432 134445666666666666663 2 5556666666666664
No 55
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.97 E-value=3.1e-31 Score=265.03 Aligned_cols=172 Identities=16% Similarity=0.217 Sum_probs=130.8
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCC-------------CcccCHHHHHHHHhhC------------------CCcee
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEA-------------TRRLDLAEGLKIAVDI------------------PSNVL 438 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~~i------------------~~NIL 438 (614)
|..++..+||||||++|||.++|+.+.. ...++|..+++|+.|| |+|||
T Consensus 98 ~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NIL 177 (308)
T 4gt4_A 98 VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL 177 (308)
T ss_dssp ECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred EEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceE
Confidence 4556778999999999999999975321 2469999999999988 99999
Q ss_pred eCCCCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCccc
Q 046036 439 LDYDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMF 514 (614)
Q Consensus 439 ld~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~ 514 (614)
||+++.+||+|||+|+.+...+.. ...+..+||+.||| |+ ...++.++|||||||++|||+| |+.||.+..
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~-----~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~ 252 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYY-----KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCB-----CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred ECCCCCEEECCcccceeccCCCce-----eEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999977544321 23445789999987 87 7889999999999999999999 899997532
Q ss_pred ccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHh
Q 046036 515 ADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVI 593 (614)
Q Consensus 515 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i 593 (614)
. .+++.....+...+.|. ++...+.+++..||+.+|++||||+||+++|+.+
T Consensus 253 ~-----------------~~~~~~i~~~~~~~~p~----------~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 253 N-----------------QDVVEMIRNRQVLPCPD----------DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp H-----------------HHHHHHHHTTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred H-----------------HHHHHHHHcCCCCCCcc----------cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1 11222222221111111 2223455788899999999999999999999754
No 56
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=1.9e-29 Score=259.22 Aligned_cols=256 Identities=23% Similarity=0.347 Sum_probs=219.8
Q ss_pred CCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCC
Q 046036 3 VPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAG 82 (614)
Q Consensus 3 ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~ 82 (614)
+|. +.++++|++|+|++|.+++ +| .|..+++|++|+|++|.+++. +. +..++ +|++|++++|.....++ .
T Consensus 81 ~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~-~~----~~~l~-~L~~L~l~~n~~~~~~~-~ 150 (347)
T 4fmz_A 81 ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI-SP----LANLT-KMYSLNLGANHNLSDLS-P 150 (347)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-GG----GTTCT-TCCEEECTTCTTCCCCG-G
T ss_pred chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-hh----hccCC-ceeEEECCCCCCccccc-c
Confidence 555 8899999999999999995 34 699999999999999999843 32 66777 99999999997654444 4
Q ss_pred CcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc----------ccceEecCCCccccccchhhhccCCCCee
Q 046036 83 IPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL----------YSFQLNLAENNLTGNIPESLENLTSLQIL 152 (614)
Q Consensus 83 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~----------~l~~L~L~~N~l~~~~~~~~~~l~~L~~L 152 (614)
+..+++|++|++++|.+.+..+ +..+++|+.|++..+.+ +++.|++++|.+++..+ +..+++|++|
T Consensus 151 ~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L 226 (347)
T 4fmz_A 151 LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP--VANMTRLNSL 226 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCCCch--hhcCCcCCEE
Confidence 8899999999999999985544 88999999998844333 68899999999996655 8999999999
Q ss_pred ecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCcccc
Q 046036 153 NLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQ 232 (614)
Q Consensus 153 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 232 (614)
++++|.+++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.++
T Consensus 227 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 227 KIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred EccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCC
Confidence 999999995443 88999999999999999864 4689999999999999999875 46889999999999999999
Q ss_pred ccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCc
Q 046036 233 GRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFE 280 (614)
Q Consensus 233 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 280 (614)
+..+..++.+++|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 301 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 301 NEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 8889999999999999999999997766 888999999999999986
No 57
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.6e-30 Score=257.95 Aligned_cols=253 Identities=19% Similarity=0.165 Sum_probs=215.2
Q ss_pred CCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEE
Q 046036 13 LQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQL 92 (614)
Q Consensus 13 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 92 (614)
-+.++.+++.++ .+|..+ .++|++|+|++|.+++..+.. |.+++ +|++|+|++|.+++..|..|..+++|++|
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~---~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 85 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAAS---FRACR-NLTILWLHSNVLARIDAAAFTGLALLEQL 85 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTT---TTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHH---cccCC-CCCEEECCCCccceeCHhhcCCccCCCEE
Confidence 367899999998 566554 468999999999999777777 67777 89999999999998888899999999999
Q ss_pred eccCCc-CcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCC
Q 046036 93 GLDRNC-LAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFS 171 (614)
Q Consensus 93 ~L~~N~-l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 171 (614)
+|++|. ++...|..|..+++|++|+ |++|++++..+..|..+++|++|+|++|++++..+..+..++
T Consensus 86 ~l~~n~~l~~~~~~~~~~l~~L~~L~------------l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 153 (285)
T 1ozn_A 86 DLSDNAQLRSVDPATFHGLGRLHTLH------------LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLG 153 (285)
T ss_dssp ECCSCTTCCCCCTTTTTTCTTCCEEE------------CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred eCCCCCCccccCHHHhcCCcCCCEEE------------CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCC
Confidence 999997 8877788899999999887 999999988888899999999999999999977777788999
Q ss_pred CCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEcc
Q 046036 172 TLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLS 251 (614)
Q Consensus 172 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 251 (614)
+|++|++++|.+++..+..+..+++|+.|++++|.+++..|..|..+++|+.|++++|.+++..+..+..+++|+.|+++
T Consensus 154 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 233 (285)
T 1ozn_A 154 NLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLN 233 (285)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECC
T ss_pred CccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEecc
Confidence 99999999999997777779999999999999999998889999999999999999999998777789999999999999
Q ss_pred CCcCcccCCcccCCCCCCCEEECcCCcCcccCCC
Q 046036 252 HNNLSGTIPKELETLPFLENLNLSFNNFEGQLPS 285 (614)
Q Consensus 252 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 285 (614)
+|++....+.. .-...++.+..+.+.+.+..|.
T Consensus 234 ~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 234 DNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp SSCEECSGGGH-HHHHHHHHCCSEECCCBEEESG
T ss_pred CCCccCCCCcH-HHHHHHHhcccccCccccCCch
Confidence 99998543321 1112344555777888777664
No 58
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.97 E-value=5.1e-32 Score=273.77 Aligned_cols=251 Identities=22% Similarity=0.191 Sum_probs=149.5
Q ss_pred cCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCc-ccCCcChh----hhccccccccEEEccCCcccccCCCC
Q 046036 8 GNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLH-GIIPPSLD----SFTNLSTKLRILDAGGNQFAGDIPAG 82 (614)
Q Consensus 8 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~----~~~~l~~~L~~L~L~~N~l~~~~p~~ 82 (614)
+..++|+.|++++|.+ .+|..+... |+.|+|++|.++ ..+|..+. .+.+++ +|++|+|++|++++.+|..
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGIS-GLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTS-CCCEEEEEEEBCBSCCCCC
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcC-CccEEEccCCcccchhHHH
Confidence 3455666666666666 455555443 666667666663 33443311 011454 6666777777766666665
Q ss_pred C--cCCCCCCEEeccCCcCcccCCccccCC-----CCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecc
Q 046036 83 I--PKYFNLIQLGLDRNCLAGSIPFSIGKL-----QNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLS 155 (614)
Q Consensus 83 ~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 155 (614)
+ ..+++|++|+|++|++++. |..++.+ ++|++|+ |++|++++..|..|+.+++|++|+|+
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~------------L~~N~l~~~~~~~~~~l~~L~~L~Ls 181 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLS------------IAQAHSLNFSCEQVRVFPALSTLDLS 181 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEE------------EESCSCCCCCTTTCCCCSSCCEEECC
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEE------------eeCCCCccchHHHhccCCCCCEEECC
Confidence 4 6666677777777766655 5555555 5555555 66666666666666666666666666
Q ss_pred cccCCCC--CCCCC--CCCCCCCEEEcCCCCCcc--CCc-ccccCCCCCceeccCCccCCCCcc-ccccCcccchHHhcc
Q 046036 156 CNHLGGS--IPKPS--GLFSTLSSIDFAHNNFNG--SLP-LEVGSLSNTQELDFSEHMLSDEIP-ITLGNRSKFEHLLLG 227 (614)
Q Consensus 156 ~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~~--~~~-~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~L~ 227 (614)
+|++.+. .+..+ ..+++|++|++++|.|++ .++ ..+..+++|++|++++|.+++..| ..+..+++|++|+|+
T Consensus 182 ~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls 261 (312)
T 1wwl_A 182 DNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLS 261 (312)
T ss_dssp SCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECT
T ss_pred CCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECC
Confidence 6665543 12222 566666666666666662 111 223455666666666666666553 344456666666666
Q ss_pred CccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcc
Q 046036 228 GNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEG 281 (614)
Q Consensus 228 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 281 (614)
+|.++ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|++++|++++
T Consensus 262 ~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 262 FTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 66666 5555544 6666666666666654 44 6666666666666666654
No 59
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.96 E-value=1.2e-30 Score=263.16 Aligned_cols=175 Identities=19% Similarity=0.309 Sum_probs=124.5
Q ss_pred CCCCCceeEEecccCCCchhhhccCCC------------CCcccCHHHHHHHHhhC------------------CCceee
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNE------------ATRRLDLAEGLKIAVDI------------------PSNVLL 439 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~------------~~~~l~~~~~~~ia~~i------------------~~NILl 439 (614)
|..++..+||||||++|||.++|+... ....++|.++++|+.|+ |+||||
T Consensus 112 ~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl 191 (329)
T 4aoj_A 112 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 191 (329)
T ss_dssp ECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred EEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE
Confidence 455678899999999999999997542 12469999999999988 999999
Q ss_pred CCCCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccc
Q 046036 440 DYDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFA 515 (614)
Q Consensus 440 d~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~ 515 (614)
|+++.+||+|||+|+........ ...+..+||+.||| |+ ...++.++|||||||++|||+| |+.||.....
T Consensus 192 ~~~~~~Ki~DFGla~~~~~~~~~-----~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~ 266 (329)
T 4aoj_A 192 GQGLVVKIGDFGMSRDIYSTDYY-----RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266 (329)
T ss_dssp ETTTEEEECCCC---------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH
T ss_pred CCCCcEEEcccccceeccCCCcc-----eecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999977554321 23345789999988 87 7789999999999999999999 8999975321
Q ss_pred cCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHH
Q 046036 516 DCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKE 595 (614)
Q Consensus 516 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~ 595 (614)
.+.++....+...+.|. .+...+.+++..||+.+|++||||+||+++|+.+.+
T Consensus 267 -----------------~~~~~~i~~g~~~~~p~----------~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 267 -----------------TEAIDCITQGRELERPR----------ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp -----------------HHHHHHHHHTCCCCCCT----------TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred -----------------HHHHHHHHcCCCCCCcc----------cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 12222222211111111 112345567889999999999999999999998875
Q ss_pred H
Q 046036 596 V 596 (614)
Q Consensus 596 ~ 596 (614)
.
T Consensus 320 ~ 320 (329)
T 4aoj_A 320 A 320 (329)
T ss_dssp S
T ss_pred C
Confidence 3
No 60
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.96 E-value=6.2e-31 Score=261.69 Aligned_cols=175 Identities=20% Similarity=0.309 Sum_probs=133.3
Q ss_pred CCCCCceeEEecccCCCchhhhccCCC----------CCcccCHHHHHHHHhhC------------------CCceeeCC
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNE----------ATRRLDLAEGLKIAVDI------------------PSNVLLDY 441 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~----------~~~~l~~~~~~~ia~~i------------------~~NILld~ 441 (614)
|..++..++|||||++|||.++|+..+ ....++|.++.+|+.|+ |+|||+|+
T Consensus 84 ~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~ 163 (299)
T 4asz_A 84 CVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE 163 (299)
T ss_dssp ECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred EeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECC
Confidence 455678899999999999999997532 23579999999999988 99999999
Q ss_pred CCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccC
Q 046036 442 DMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADC 517 (614)
Q Consensus 442 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~ 517 (614)
++.+||+|||+|+........ .......||+.||| |. ...++.|+|||||||++|||+| |+.||.+...
T Consensus 164 ~~~~Ki~DFGla~~~~~~~~~-----~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-- 236 (299)
T 4asz_A 164 NLLVKIGDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-- 236 (299)
T ss_dssp GGCEEECCCSCHHHHTGGGCE-----EETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--
T ss_pred CCcEEECCcccceecCCCCce-----eecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 999999999999976544321 22334679999988 87 7789999999999999999999 8999975322
Q ss_pred chHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 518 LSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 518 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
.+++.....+...+.|. .+...+.+++..||+.+|++||||+||+..|+++.+.
T Consensus 237 ---------------~~~~~~i~~~~~~~~p~----------~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 237 ---------------NEVIECITQGRVLQRPR----------TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp ---------------HHHHHHHHHTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---------------HHHHHHHHcCCCCCCCc----------cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 12222222221111111 1223455688899999999999999999999988654
No 61
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=3.3e-29 Score=266.03 Aligned_cols=258 Identities=19% Similarity=0.171 Sum_probs=208.4
Q ss_pred CCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCC
Q 046036 3 VPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAG 82 (614)
Q Consensus 3 ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~ 82 (614)
-|..++++++|++|++++|.+++. | .|+.+++|++|+|++|++++. | +..++ +|++|+|++|++++. |
T Consensus 34 ~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~-----~~~l~-~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 34 DTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D-----LSQNT-NLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp SEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C-----CTTCT-TCSEEECCSSCCSCC-C--
T ss_pred cccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c-----cccCC-CCCEEECcCCCCcee-e--
Confidence 355788899999999999999965 5 699999999999999999964 3 56777 999999999999864 4
Q ss_pred CcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCC
Q 046036 83 IPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGS 162 (614)
Q Consensus 83 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 162 (614)
++.+++|++|+|++|++++ +| ++.+++|++|+ +++|++++. + ++.+++|++|++++|+..+.
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~------------l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~ 163 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLN------------CARNTLTEI-D--VSHNTQLTELDCHLNKKITK 163 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEE------------CTTSCCSCC-C--CTTCTTCCEEECTTCSCCCC
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEE------------CCCCcccee-c--cccCCcCCEEECCCCCcccc
Confidence 8999999999999999996 44 88888888887 999998864 3 78889999999999966555
Q ss_pred CCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCC
Q 046036 163 IPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSF 242 (614)
Q Consensus 163 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 242 (614)
+ .+..+++|++|++++|.+++ +| +..+++|+.|++++|.+++. .++.+++|+.|++++|++++ +| ++.+
T Consensus 164 ~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l 232 (457)
T 3bz5_A 164 L--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPL 232 (457)
T ss_dssp C--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTC
T ss_pred c--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--cccc
Confidence 5 47788899999999999986 44 78888999999999998875 47888899999999999986 55 7888
Q ss_pred CccceEEccCCcCcccCCcccCCCC-------CCCEEECcCCcCcccCCCccccCCCceEEEecCCC
Q 046036 243 KGTIDLNLSHNNLSGTIPKELETLP-------FLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGK 302 (614)
Q Consensus 243 ~~L~~L~Ls~N~l~~~~p~~~~~l~-------~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~ 302 (614)
++|+.|++++|++++..+..+..+. +|+.|++++|.+.+.+| ...+++++.+++.+|+.
T Consensus 233 ~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~-~~~l~~L~~L~Ls~n~~ 298 (457)
T 3bz5_A 233 TQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ-AEGCRKIKELDVTHNTQ 298 (457)
T ss_dssp TTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE-CTTCTTCCCCCCTTCTT
T ss_pred CCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc-ccccccCCEEECCCCcc
Confidence 8999999999999876555444443 44555666666555555 34567777788877763
No 62
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.96 E-value=3e-30 Score=262.49 Aligned_cols=173 Identities=21% Similarity=0.272 Sum_probs=130.4
Q ss_pred CCceeEEecccCCCchhhhccCCCC-------------CcccCHHHHHHHHhhC------------------CCceeeCC
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEA-------------TRRLDLAEGLKIAVDI------------------PSNVLLDY 441 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~~i------------------~~NILld~ 441 (614)
++..++|||||++|||.++|+.... ...++|..++.|+.|| |+|||+|+
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 220 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCC
Confidence 4568999999999999999975321 2458999999988887 99999999
Q ss_pred CCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccC
Q 046036 442 DMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADC 517 (614)
Q Consensus 442 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~ 517 (614)
++.+||+|||+|+.+..+... ...+..+||+.||| |. ...++.++|||||||++|||+| |+.||.+....
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~-----~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~- 294 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDY-----VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 294 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTS-----EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-
T ss_pred CCCEEECcchhhhhcccCCCc-----eeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-
Confidence 999999999999977654332 33456789999988 87 7789999999999999999998 89999753221
Q ss_pred chHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 518 LSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 518 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
+.+...+........++ .+...+.+++..||+.+|++||||.||++.|+.+.+.
T Consensus 295 ----------------~~~~~~i~~g~~~~~p~---------~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 295 ----------------EEFCRRLKEGTRMRAPD---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp ----------------HHHHHHHHHTCCCCCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----------------HHHHHHHHcCCCCCCCc---------cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 11112222221111111 1122345677899999999999999999999887654
No 63
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.96 E-value=4.4e-30 Score=257.30 Aligned_cols=188 Identities=16% Similarity=0.136 Sum_probs=128.6
Q ss_pred ceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------------CCceeeCCCCCeeec
Q 046036 395 FKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------------PSNVLLDYDMTAYVG 448 (614)
Q Consensus 395 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------------~~NILld~~~~~kl~ 448 (614)
..+||||||++|||.++|+.. .++|..+.+|+.++ |+|||||+++.+||+
T Consensus 75 ~~~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~ 150 (303)
T 3hmm_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred EEEEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEE
Confidence 579999999999999999853 48999998887766 899999999999999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc-cC-------CCCccCceeehhHHHHHHHhCCCCCCcccccCch
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VA-------RYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLS 519 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~-------~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~ 519 (614)
|||+|+........ ........+||++||| |+ .+ .++.|+||||||||+|||+||+.|+.........
T Consensus 151 DFGla~~~~~~~~~---~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p 227 (303)
T 3hmm_A 151 DLGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp CCTTCEEEETTTTE---ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred eCCCCccccCCCCc---eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc
Confidence 99999977544321 0122345689999987 87 22 4678999999999999999999887543221110
Q ss_pred HHHHHHhhCCC-ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 520 LHNFCEMALPE-SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 520 l~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
.. ...... ...+.......+...+..+.+.. ..++...+.+++.+||+.+|++||||.||+++|+++.++
T Consensus 228 ~~---~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 228 YY---DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ----SCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp TT---TTSCSSCCHHHHHHHHTTSCCCCCCCGGGG----SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ch---hcccccchHHHHHHHHhcccCCCCCCcccc----chHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 00 000011 12222222223333222222111 124556677899999999999999999999999988754
No 64
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.6e-30 Score=262.78 Aligned_cols=249 Identities=22% Similarity=0.233 Sum_probs=213.9
Q ss_pred CCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCccc-ccCCCCCc-------CCCCCCEEeccCCcCcc
Q 046036 30 HLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFA-GDIPAGIP-------KYFNLIQLGLDRNCLAG 101 (614)
Q Consensus 30 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~ 101 (614)
.++..++|++|++++|.+ .+|..+.. .|+.|+|++|.++ ..+|..+. ++++|++|+|++|++++
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~------~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 109 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTD------IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTG 109 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHH------HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBS
T ss_pred EEccCCCceeEeeccccc--ccHHHHHH------HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccc
Confidence 356678899999999999 67876432 4788999999994 45666555 78999999999999999
Q ss_pred cCCccc--cCCCCCCcccccccccccceEecCCCccccccchhhhcc-----CCCCeeecccccCCCCCCCCCCCCCCCC
Q 046036 102 SIPFSI--GKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENL-----TSLQILNLSCNHLGGSIPKPSGLFSTLS 174 (614)
Q Consensus 102 ~~p~~~--~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 174 (614)
.+|..+ +.+++|++|+ |++|++++. |..+..+ ++|++|+|++|++++..|..++.+++|+
T Consensus 110 ~~~~~~~~~~l~~L~~L~------------Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 176 (312)
T 1wwl_A 110 TAPPPLLEATGPDLNILN------------LRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALS 176 (312)
T ss_dssp CCCCCSSSCCSCCCSEEE------------EESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCC
T ss_pred hhHHHHHHhcCCCccEEE------------ccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCC
Confidence 999886 8899999887 999999987 8888888 9999999999999988889999999999
Q ss_pred EEEcCCCCCccC--Ccccc--cCCCCCceeccCCccCCCC---ccccccCcccchHHhccCccccccCC-ccccCCCccc
Q 046036 175 SIDFAHNNFNGS--LPLEV--GSLSNTQELDFSEHMLSDE---IPITLGNRSKFEHLLLGGNMFQGRIP-PFFGSFKGTI 246 (614)
Q Consensus 175 ~L~Ls~N~l~~~--~~~~~--~~l~~L~~L~ls~N~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~ 246 (614)
+|++++|++.+. .+..+ ..+++|++|++++|.+++. ....+..+++|+.|+|++|.+++.+| ..+..+++|+
T Consensus 177 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~ 256 (312)
T 1wwl_A 177 TLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLN 256 (312)
T ss_dssp EEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCC
T ss_pred EEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCC
Confidence 999999998865 34444 8899999999999999842 22345678999999999999998775 5677789999
Q ss_pred eEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCCc
Q 046036 247 DLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGKL 303 (614)
Q Consensus 247 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~ 303 (614)
+|+|++|+|+ .+|..+. ++|+.|++++|++++. |....+++++.+++.+|+..
T Consensus 257 ~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 257 SLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp EEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTT
T ss_pred EEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCC
Confidence 9999999999 7777776 8999999999999988 66888899999999999753
No 65
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=4.1e-30 Score=275.48 Aligned_cols=215 Identities=21% Similarity=0.205 Sum_probs=118.4
Q ss_pred CCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCc
Q 046036 36 KLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQK 115 (614)
Q Consensus 36 ~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 115 (614)
+|++|+|++|.+++..|.. |..++ +|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|+.
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~---~~~l~-~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAAD---LAPFT-KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp GCCEEECCSSCCCCCCGGG---GTTCT-TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred CccEEEeeCCcCCCCCHHH---HhCCC-CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 5555555555555444444 44444 55555555555554333 5555555555555555553221 144444
Q ss_pred ccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCccccc-CC
Q 046036 116 LNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVG-SL 194 (614)
Q Consensus 116 L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l 194 (614)
|+ |++|.|++..+. .+++|+.|+|++|.+++..|..++.+++|+.|+|++|.|++..|..+. .+
T Consensus 104 L~------------L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l 168 (487)
T 3oja_A 104 LH------------AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168 (487)
T ss_dssp EE------------CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGT
T ss_pred EE------------CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhC
Confidence 43 555555544332 235555555555555555555555555555666666655555555554 45
Q ss_pred CCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEEC
Q 046036 195 SNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNL 274 (614)
Q Consensus 195 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 274 (614)
++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++. |+.+..+++|+.|+|++|.|++ +|..+..+++|+.|++
T Consensus 169 ~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l 244 (487)
T 3oja_A 169 DTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDL 244 (487)
T ss_dssp TTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEEC
T ss_pred CcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEc
Confidence 566666666666554422 22356666666666666643 3336666666677777776664 4555666666777777
Q ss_pred cCCcCc
Q 046036 275 SFNNFE 280 (614)
Q Consensus 275 s~N~l~ 280 (614)
++|++.
T Consensus 245 ~~N~l~ 250 (487)
T 3oja_A 245 RGNGFH 250 (487)
T ss_dssp TTCCBC
T ss_pred CCCCCc
Confidence 777666
No 66
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=1.9e-28 Score=260.07 Aligned_cols=270 Identities=21% Similarity=0.226 Sum_probs=169.4
Q ss_pred CCCCccccCCCCCCeeeecCCcccccCCcCCCCCCCC-------------cEEecccccCcccCCcChhhhc--------
Q 046036 1 GNVPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKL-------------TYLSLFSNNLHGIIPPSLDSFT-------- 59 (614)
Q Consensus 1 g~ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~L~~N~l~~~~p~~~~~~~-------- 59 (614)
|+||++|+++++|++|++++|.+++.+|..++.+++| ++|++++|++++ +|.....+.
T Consensus 24 ~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~~~~L~~L~l~~n~ 102 (454)
T 1jl5_A 24 TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPELPPHLESLVASCNS 102 (454)
T ss_dssp ----------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSCCTTCSEEECCSSC
T ss_pred hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCCcCCCCEEEccCCc
Confidence 5678888888888888888888888888877776543 666666666653 222100000
Q ss_pred ------cccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc--------cc
Q 046036 60 ------NLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL--------YS 125 (614)
Q Consensus 60 ------~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~--------~l 125 (614)
.++ +|++|++++|++++ +|.. .++|++|++++|++++ +| .|+++++|++|++..+.+ ++
T Consensus 103 l~~lp~~~~-~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~~~L 175 (454)
T 1jl5_A 103 LTELPELPQ-SLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLPPSL 175 (454)
T ss_dssp CSSCCCCCT-TCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCCTTC
T ss_pred CCccccccC-CCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCcccc
Confidence 011 45555555555542 2221 1588888888888885 66 588888888888733322 67
Q ss_pred ceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCc
Q 046036 126 FQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEH 205 (614)
Q Consensus 126 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N 205 (614)
++|++++|++++ +| .|..+++|++|++++|++++ +|... ++|++|++++|.++ .+| .++.+++|++|++++|
T Consensus 176 ~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N 247 (454)
T 1jl5_A 176 EFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNN 247 (454)
T ss_dssp CEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSS
T ss_pred cEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCC
Confidence 888888888886 45 58888888888888888874 44432 57888888888887 566 4788888888888888
Q ss_pred cCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCC
Q 046036 206 MLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPS 285 (614)
Q Consensus 206 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 285 (614)
++++ +|.. +++|+.|++++|.+++ +|.. +++|+.|++++|++++. |.. .++|+.|++++|.+++.. .
T Consensus 248 ~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~-~ 314 (454)
T 1jl5_A 248 LLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLC-D 314 (454)
T ss_dssp CCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEEC-C
T ss_pred cCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCccc-C
Confidence 8875 3332 3677788888888774 4543 36777777777777752 211 145666666666665522 1
Q ss_pred ccccCCCceEEEecCC
Q 046036 286 MSVFTNTSVISIVGNG 301 (614)
Q Consensus 286 ~~~~~~l~~~~~~~N~ 301 (614)
...+++.+++.+|.
T Consensus 315 --~~~~L~~L~Ls~N~ 328 (454)
T 1jl5_A 315 --LPPSLEELNVSNNK 328 (454)
T ss_dssp --CCTTCCEEECCSSC
T ss_pred --CcCcCCEEECCCCc
Confidence 11356666666664
No 67
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=3.3e-30 Score=261.11 Aligned_cols=264 Identities=21% Similarity=0.211 Sum_probs=179.7
Q ss_pred CCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCE
Q 046036 12 RLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQ 91 (614)
Q Consensus 12 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 91 (614)
+++.++++.+.+....+..+..+++|++|+|++|++++..|.. |.+++ +|++|+|++|.+++..+ +..+++|++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~---~~~l~-~L~~L~Ls~n~l~~~~~--~~~l~~L~~ 84 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAAD---LAPFT-KLELLNLSSNVLYETLD--LESLSTLRT 84 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHH---HTTCT-TCCEEECTTSCCEEEEE--ETTCTTCCE
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHH---hhCCC-cCCEEECCCCcCCcchh--hhhcCCCCE
Confidence 3555666666666555555566677888888888777655555 56666 77788888887775544 777778888
Q ss_pred EeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCC
Q 046036 92 LGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFS 171 (614)
Q Consensus 92 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 171 (614)
|+|++|++++.. ..++|++|+ +++|++++..+.. +++|++|++++|++++..+..+..++
T Consensus 85 L~Ls~n~l~~l~-----~~~~L~~L~------------l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~ 144 (317)
T 3o53_A 85 LDLNNNYVQELL-----VGPSIETLH------------AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRS 144 (317)
T ss_dssp EECCSSEEEEEE-----ECTTCCEEE------------CCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGS
T ss_pred EECcCCcccccc-----CCCCcCEEE------------CCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccC
Confidence 888888777432 235666555 7778777655443 56778888888888766666777777
Q ss_pred CCCEEEcCCCCCccCCcccc-cCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEc
Q 046036 172 TLSSIDFAHNNFNGSLPLEV-GSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNL 250 (614)
Q Consensus 172 ~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 250 (614)
+|++|++++|.+++..+..+ ..+++|++|++++|.+++.. ....+++|++|+|++|.+++ +|..+..+++|+.|+|
T Consensus 145 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L 221 (317)
T 3o53_A 145 RVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISL 221 (317)
T ss_dssp SEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEEC
T ss_pred CCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCc-chhhhcccCcccEEEC
Confidence 88888888888876666655 36778888888888877552 23347778888888888874 4445777788888888
Q ss_pred cCCcCcccCCcccCCCCCCCEEECcCCcCc-ccCCC-ccccCCCceEEEecCCCccc
Q 046036 251 SHNNLSGTIPKELETLPFLENLNLSFNNFE-GQLPS-MSVFTNTSVISIVGNGKLCG 305 (614)
Q Consensus 251 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~-~~~~~~l~~~~~~~N~~~c~ 305 (614)
++|+++ .+|..+..+++|+.|++++|+++ +.+|. ...++.+..+++.+++.+.+
T Consensus 222 ~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 222 RNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp TTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred cCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccC
Confidence 888887 45667777888888888888887 33322 23344455555554443333
No 68
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2e-29 Score=270.05 Aligned_cols=234 Identities=18% Similarity=0.144 Sum_probs=172.5
Q ss_pred CCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCE
Q 046036 12 RLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQ 91 (614)
Q Consensus 12 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 91 (614)
+|+.|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..++ +|++|+|++|.|++..+ .++|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-----l~~l~-~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-----LESLS-TLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-----CTTCT-TCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-----cccCC-CCCEEEecCCcCCCCCC-----CCCcCE
Confidence 78888888888887777788888888888888888876554 45666 78888888888874332 267888
Q ss_pred EeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCC-CC
Q 046036 92 LGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSG-LF 170 (614)
Q Consensus 92 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l 170 (614)
|+|++|.+++..+.. +++|+.|+ |++|.+++..|..|..+++|++|+|++|.+++..|..+. .+
T Consensus 104 L~L~~N~l~~~~~~~---l~~L~~L~------------L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l 168 (487)
T 3oja_A 104 LHAANNNISRVSCSR---GQGKKNIY------------LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168 (487)
T ss_dssp EECCSSCCCCEEECC---CSSCEEEE------------CCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGT
T ss_pred EECcCCcCCCCCccc---cCCCCEEE------------CCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhC
Confidence 888888887655533 45566555 888888877777788888888888888888876676665 67
Q ss_pred CCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEc
Q 046036 171 STLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNL 250 (614)
Q Consensus 171 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 250 (614)
++|+.|+|++|.|++.. .+..+++|+.|+|++|.+++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++
T Consensus 169 ~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l 244 (487)
T 3oja_A 169 DTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDL 244 (487)
T ss_dssp TTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEEC
T ss_pred CcccEEecCCCcccccc--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEc
Confidence 88888888888887552 23457788888888888876444 47778888888888888874 6667777788888888
Q ss_pred cCCcCc-ccCCcccCCCCCCCEEECc
Q 046036 251 SHNNLS-GTIPKELETLPFLENLNLS 275 (614)
Q Consensus 251 s~N~l~-~~~p~~~~~l~~L~~L~ls 275 (614)
++|.+. +.+|..+..++.|+.++++
T Consensus 245 ~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 245 RGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCcCcchHHHHHhCCCCcEEecc
Confidence 888877 5666667777766666654
No 69
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=2.5e-27 Score=235.07 Aligned_cols=210 Identities=22% Similarity=0.183 Sum_probs=156.2
Q ss_pred cccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhh
Q 046036 64 KLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESL 143 (614)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~ 143 (614)
+|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+ |++|.+++..+..|
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~------------L~~n~l~~~~~~~~ 96 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLI------------LTGNPIQSLALGAF 96 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEE------------CTTCCCCEECTTTT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEE------------CCCCccCccChhhh
Confidence 566667777766655555666666777777777766655555666666666665 77777766666667
Q ss_pred hccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccC-CcccccCCCCCceeccCCccCCCCccccccCcccch
Q 046036 144 ENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGS-LPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFE 222 (614)
Q Consensus 144 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 222 (614)
.++++|++|++++|++.+..+..+..+++|++|++++|.+++. +|..+..+++|++|++++|++++..+..+..+.+|+
T Consensus 97 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 176 (276)
T 2z62_A 97 SGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (276)
T ss_dssp TTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT
T ss_pred cCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc
Confidence 7777777777777777765555677777777788877777753 577778888888888888888777677777777766
Q ss_pred ----HHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCc
Q 046036 223 ----HLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSM 286 (614)
Q Consensus 223 ----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 286 (614)
.|++++|.+++..+..+. ..+|+.|+|++|++++..+..|..+++|+.|++++|++++..|..
T Consensus 177 ~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 177 LLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp TCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred ccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 788888988865555554 448999999999999877777889999999999999999887754
No 70
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=5.4e-29 Score=252.17 Aligned_cols=245 Identities=18% Similarity=0.150 Sum_probs=152.8
Q ss_pred CCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCC
Q 046036 9 NLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFN 88 (614)
Q Consensus 9 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~ 88 (614)
.+++|++|+|++|++++..|..|..+++|++|+|++|++++..| +..++ +|++|+|++|++++.. ..++
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-----~~~l~-~L~~L~Ls~n~l~~l~-----~~~~ 100 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-----LESLS-TLRTLDLNNNYVQELL-----VGPS 100 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-----ETTCT-TCCEEECCSSEEEEEE-----ECTT
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-----hhhcC-CCCEEECcCCcccccc-----CCCC
Confidence 34567777777777776666666777777777777777664433 44555 6677777777766322 2256
Q ss_pred CCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCC
Q 046036 89 LIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSG 168 (614)
Q Consensus 89 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 168 (614)
|++|++++|++++..+.. +++|++|+ +++|++++..+..|..+++|++|+|++|.+++..+..+.
T Consensus 101 L~~L~l~~n~l~~~~~~~---~~~L~~L~------------l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 165 (317)
T 3o53_A 101 IETLHAANNNISRVSCSR---GQGKKNIY------------LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA 165 (317)
T ss_dssp CCEEECCSSCCSEEEECC---CSSCEEEE------------CCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGG
T ss_pred cCEEECCCCccCCcCccc---cCCCCEEE------------CCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHh
Confidence 777777777766544332 34455554 777777666666666677777777777776655554442
Q ss_pred -CCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccce
Q 046036 169 -LFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTID 247 (614)
Q Consensus 169 -~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 247 (614)
.+++|++|+|++|.|++. + ....+++|++|+|++|.+++. |..+..+++|+.|+|++|.++ .+|..+..+++|+.
T Consensus 166 ~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~ 241 (317)
T 3o53_A 166 ASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEH 241 (317)
T ss_dssp GGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCE
T ss_pred hccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCE
Confidence 566677777777776643 2 223466677777777777643 333666677777777777776 45556666677777
Q ss_pred EEccCCcCc-ccCCcccCCCCCCCEEECc-CCcCcccC
Q 046036 248 LNLSHNNLS-GTIPKELETLPFLENLNLS-FNNFEGQL 283 (614)
Q Consensus 248 L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls-~N~l~~~~ 283 (614)
|++++|+++ +.+|..+..+++|+.++++ .+.+++..
T Consensus 242 L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~ 279 (317)
T 3o53_A 242 FDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQN 279 (317)
T ss_dssp EECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSS
T ss_pred EEccCCCccCcCHHHHHhccccceEEECCCchhccCCc
Confidence 777777776 5566666666666666666 33444433
No 71
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=1.2e-27 Score=253.77 Aligned_cols=268 Identities=21% Similarity=0.252 Sum_probs=180.1
Q ss_pred CccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhcccc---------ccccEEEccCCc
Q 046036 4 PQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLS---------TKLRILDAGGNQ 74 (614)
Q Consensus 4 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~---------~~L~~L~L~~N~ 74 (614)
|+.+ +.++|++|++++|.+ +.+|++|+++++|++|++++|.++|.+|..++.+.++. .++++|++++|.
T Consensus 5 p~~~-~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~ 82 (454)
T 1jl5_A 5 PRNV-SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLG 82 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSC
T ss_pred cccc-ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCc
Confidence 3444 468999999999999 69999999999999999999999999999955433320 146999999999
Q ss_pred ccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc--------ccceEecCCCccccccchhhhcc
Q 046036 75 FAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL--------YSFQLNLAENNLTGNIPESLENL 146 (614)
Q Consensus 75 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~--------~l~~L~L~~N~l~~~~~~~~~~l 146 (614)
+++ +|.. .++|++|++++|.+++ +|.. +++|++|++..+.+ ++++|++++|++++ +| .|.++
T Consensus 83 l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l 152 (454)
T 1jl5_A 83 LSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNS 152 (454)
T ss_dssp CSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTC
T ss_pred ccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCC
Confidence 984 5542 3699999999999996 6654 37788888633322 67788888888885 56 58888
Q ss_pred CCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhc
Q 046036 147 TSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLL 226 (614)
Q Consensus 147 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 226 (614)
++|++|++++|++++ +|..+ ++|++|++++|.+++ +| .++.+++|+.|++++|.+++ +|... ++|++|++
T Consensus 153 ~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l 222 (454)
T 1jl5_A 153 SFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVA 222 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEEC
T ss_pred CCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEEC
Confidence 888888888888884 55433 488888888888885 55 58888888888888888876 33322 47888888
Q ss_pred cCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCC
Q 046036 227 GGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGK 302 (614)
Q Consensus 227 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~ 302 (614)
++|.++ .+|. ++.+++|++|++++|++++ +|.. +++|+.|++++|++++. |.. +++++.+++.+|..
T Consensus 223 ~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l-~~~--~~~L~~L~ls~N~l 289 (454)
T 1jl5_A 223 GNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDL-PEL--PQSLTFLDVSENIF 289 (454)
T ss_dssp CSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCC-CCC--CTTCCEEECCSSCC
T ss_pred cCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCccccc-Ccc--cCcCCEEECcCCcc
Confidence 888887 5664 7888888888888888885 4442 37788888888888873 332 36778888888753
No 72
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=5.7e-27 Score=232.50 Aligned_cols=224 Identities=20% Similarity=0.197 Sum_probs=186.6
Q ss_pred eeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEec
Q 046036 15 NLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGL 94 (614)
Q Consensus 15 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 94 (614)
..+..+..++ .+|..+. ++|++|+|++|++++..+.. |.+++ +|++|+|++|++++..+..|..+++|++|+|
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~---~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 83 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYS---FFSFP-ELQVLDLSRCEIQTIEDGAYQSLSHLSTLIL 83 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTT---TTTCT-TCSEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhH---hcccc-CCcEEECCCCcCCccCHHHccCCcCCCEEEC
Confidence 4556666666 5666664 47899999999998776666 66776 8899999999998777778888999999999
Q ss_pred cCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCC-CCCCCCCCCCC
Q 046036 95 DRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGS-IPKPSGLFSTL 173 (614)
Q Consensus 95 ~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L 173 (614)
++|.+++..+..|.++++|++|+ +++|++++..+..+..+++|++|++++|.+++. +|..+..+++|
T Consensus 84 ~~n~l~~~~~~~~~~l~~L~~L~------------l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L 151 (276)
T 2z62_A 84 TGNPIQSLALGAFSGLSSLQKLV------------AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNL 151 (276)
T ss_dssp TTCCCCEECTTTTTTCTTCCEEE------------CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTC
T ss_pred CCCccCccChhhhcCCccccEEE------------CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCC
Confidence 99999888888888888888887 999999877777788999999999999999863 58888889999
Q ss_pred CEEEcCCCCCccCCcccccCCCCCc----eeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEE
Q 046036 174 SSIDFAHNNFNGSLPLEVGSLSNTQ----ELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLN 249 (614)
Q Consensus 174 ~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 249 (614)
++|++++|.+++..+..+..+.+|+ .|++++|.+++..+..+.. .+|+.|+|++|.+++..+..|..+++|+.|+
T Consensus 152 ~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 230 (276)
T 2z62_A 152 EHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIW 230 (276)
T ss_dssp CEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEE
T ss_pred CEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEE
Confidence 9999999999987777787777777 8999999998766665544 4899999999999977777789999999999
Q ss_pred ccCCcCccc
Q 046036 250 LSHNNLSGT 258 (614)
Q Consensus 250 Ls~N~l~~~ 258 (614)
|++|++++.
T Consensus 231 l~~N~~~c~ 239 (276)
T 2z62_A 231 LHTNPWDCS 239 (276)
T ss_dssp CCSSCBCCC
T ss_pred ccCCccccc
Confidence 999999854
No 73
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.95 E-value=2.6e-28 Score=245.13 Aligned_cols=179 Identities=19% Similarity=0.156 Sum_probs=125.9
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCC-Ceeecccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDM-TAYVGDFG 451 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~-~~kl~DfG 451 (614)
..++..|+|||||++|+|.++|+.. ..+++.....|+.++ |+||||+.++ ++||+|||
T Consensus 120 ~~~~~~~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFG 196 (336)
T 4g3f_A 120 REGPWVNIFMELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG 196 (336)
T ss_dssp EETTEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCT
T ss_pred EECCEEEEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCC
Confidence 3466789999999999999999753 358999998888888 9999999987 69999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
+|+.+...... .........+||+.||| |. ...++.++|||||||++|||+||+.||........ ......
T Consensus 197 la~~~~~~~~~--~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~--- 270 (336)
T 4g3f_A 197 HALCLQPDGLG--KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIAS--- 270 (336)
T ss_dssp TCEEC--------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHH---
T ss_pred CCeEccCCCcc--cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHc---
Confidence 99987654221 00112234689999988 87 67799999999999999999999999976433221 111111
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhc
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLG 599 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~ 599 (614)
.... ...-++... ..+.++...|++.||++|||+.|+++.|..+.+....
T Consensus 271 -------------~~~~-~~~~~~~~s-------~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~ 320 (336)
T 4g3f_A 271 -------------EPPP-IREIPPSCA-------PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGG 320 (336)
T ss_dssp -------------SCCG-GGGSCTTSC-------HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTS
T ss_pred -------------CCCC-chhcCccCC-------HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhh
Confidence 0000 000001111 1233566799999999999999999999887766543
No 74
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.94 E-value=5.5e-28 Score=238.69 Aligned_cols=159 Identities=20% Similarity=0.349 Sum_probs=115.7
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------CCceeeCC-CCCeeecccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------PSNVLLDY-DMTAYVGDFG 451 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------~~NILld~-~~~~kl~DfG 451 (614)
++..++|||||++|+|.++|+.. ..+++.....++.++ |+||||+. ++.+||+|||
T Consensus 101 ~~~~~lvmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFG 177 (290)
T 3fpq_A 101 KKCIVLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTT
T ss_pred CcEEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCc
Confidence 45679999999999999999753 358888887777666 99999985 7899999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+|+..... .....+||+.||| |. .++++.++|||||||++|||+||+.||.+....
T Consensus 178 la~~~~~~---------~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~------------- 235 (290)
T 3fpq_A 178 LATLKRAS---------FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNA------------- 235 (290)
T ss_dssp GGGGCCTT---------SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-------------
T ss_pred CCEeCCCC---------ccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-------------
Confidence 99865432 2445789999977 88 677999999999999999999999999642211
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
..+...+..... |.. +.. .....+.++...|++.+|++|||++|+++
T Consensus 236 ----~~~~~~i~~~~~--~~~---~~~---~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 236 ----AQIYRRVTSGVK--PAS---FDK---VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ----HHHHHHHTTTCC--CGG---GGG---CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHHHcCCC--CCC---CCc---cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111112211111 000 000 00112345677999999999999999875
No 75
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=6.3e-26 Score=224.13 Aligned_cols=205 Identities=20% Similarity=0.214 Sum_probs=126.1
Q ss_pred ccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhh
Q 046036 65 LRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLE 144 (614)
Q Consensus 65 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~ 144 (614)
.+.+++++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+ |++|+++...+..|.
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~------------l~~n~l~~i~~~~~~ 82 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLY------------LNDNKLQTLPAGIFK 82 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEE------------CCSSCCSCCCTTTTS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEE------------CCCCccCeeChhhhc
Confidence 444555555554 3444332 3455555555555544444455555555444 555555544444455
Q ss_pred ccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHH
Q 046036 145 NLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHL 224 (614)
Q Consensus 145 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L 224 (614)
.+++|++|+|++|++++..+..+..+++|++|++++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|+.|
T Consensus 83 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 162 (270)
T 2o6q_A 83 ELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKEL 162 (270)
T ss_dssp SCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCccccee
Confidence 55556666666666554444445556666666666666665555555666666666666666665555556666667777
Q ss_pred hccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCC
Q 046036 225 LLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLP 284 (614)
Q Consensus 225 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 284 (614)
+|++|.+++..+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|++.+..+
T Consensus 163 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 163 RLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred EecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 777777766556667778888888888888887666677888888888888888876554
No 76
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=4.2e-26 Score=225.60 Aligned_cols=226 Identities=20% Similarity=0.237 Sum_probs=122.8
Q ss_pred CCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEE
Q 046036 13 LQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQL 92 (614)
Q Consensus 13 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 92 (614)
+..+++.++.+.+.. .+..+++|+.|++++|.++. ++ . +..++ +|++|+|++|.+++ + ..+..+++|++|
T Consensus 21 l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~---l~~l~-~L~~L~l~~n~l~~-~-~~l~~l~~L~~L 90 (272)
T 3rfs_A 21 TIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-G---IQYLP-NVRYLALGGNKLHD-I-SALKELTNLTYL 90 (272)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-CT-T---GGGCT-TCCEEECTTSCCCC-C-GGGTTCTTCCEE
T ss_pred HHHHHhcCccccccc--ccccccceeeeeeCCCCccc-cc-c---cccCC-CCcEEECCCCCCCC-c-hhhcCCCCCCEE
Confidence 334444455444332 23445555566666555552 22 2 44444 55556666665553 2 245555566666
Q ss_pred eccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCC
Q 046036 93 GLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFST 172 (614)
Q Consensus 93 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 172 (614)
+|++|.+++..+..|+.+++|++|+ |++|++++..+..|..+++|++|+|++|++++..+..+..+++
T Consensus 91 ~L~~n~l~~~~~~~~~~l~~L~~L~------------L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 158 (272)
T 3rfs_A 91 ILTGNQLQSLPNGVFDKLTNLKELV------------LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTN 158 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEE------------CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred ECCCCccCccChhHhcCCcCCCEEE------------CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCcc
Confidence 6666655555555555555555554 5566655555555555566666666666655444444555556
Q ss_pred CCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccC
Q 046036 173 LSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSH 252 (614)
Q Consensus 173 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 252 (614)
|+.|++++|++++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+.+. +++|+.|+++.
T Consensus 159 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~ 231 (272)
T 3rfs_A 159 LTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWI 231 (272)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHH
T ss_pred CCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHH
Confidence 66666666666555444455556666666666666555555555566666666666655432 33455566666
Q ss_pred CcCcccCCcccCCCC
Q 046036 253 NNLSGTIPKELETLP 267 (614)
Q Consensus 253 N~l~~~~p~~~~~l~ 267 (614)
|.++|.+|..++.++
T Consensus 232 n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 232 NKHSGVVRNSAGSVA 246 (272)
T ss_dssp HHTGGGBBCTTSCBC
T ss_pred HhCCCcccCcccccC
Confidence 666666665555443
No 77
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=4.1e-27 Score=232.87 Aligned_cols=222 Identities=21% Similarity=0.197 Sum_probs=172.3
Q ss_pred CCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCC
Q 046036 35 SKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQ 114 (614)
Q Consensus 35 ~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 114 (614)
.++..+++..+.+..... +..++ +|+.|++++|.++ .++ .+..+++|++|+|++|.+++. ..++.+++|+
T Consensus 19 ~~l~~l~l~~~~~~~~~~-----~~~l~-~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 88 (272)
T 3rfs_A 19 AETIKANLKKKSVTDAVT-----QNELN-SIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLT 88 (272)
T ss_dssp HHHHHHHHTCSCTTSEEC-----HHHHT-TCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCC
T ss_pred HHHHHHHhcCcccccccc-----ccccc-ceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCC
Confidence 345566666776664322 45565 7888888888876 333 477888888888888888753 3677777777
Q ss_pred cccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCC
Q 046036 115 KLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSL 194 (614)
Q Consensus 115 ~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 194 (614)
+|+ |++|.+++..+..|..+++|++|+|++|++++..+..+..+++|++|++++|.+++..+..+..+
T Consensus 89 ~L~------------L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 156 (272)
T 3rfs_A 89 YLI------------LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKL 156 (272)
T ss_dssp EEE------------CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred EEE------------CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccC
Confidence 776 88888887777778888888888888888887666677888888888888888887777677888
Q ss_pred CCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEEC
Q 046036 195 SNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNL 274 (614)
Q Consensus 195 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 274 (614)
++|+.|++++|++++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|.+.+. +++|+.|++
T Consensus 157 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~ 229 (272)
T 3rfs_A 157 TNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSE 229 (272)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHH
T ss_pred ccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHH
Confidence 8888888888888877777778888888888888888877777788888888888888887743 456788888
Q ss_pred cCCcCcccCCC
Q 046036 275 SFNNFEGQLPS 285 (614)
Q Consensus 275 s~N~l~~~~p~ 285 (614)
+.|.++|.+|.
T Consensus 230 ~~n~~~g~ip~ 240 (272)
T 3rfs_A 230 WINKHSGVVRN 240 (272)
T ss_dssp HHHHTGGGBBC
T ss_pred HHHhCCCcccC
Confidence 88888888775
No 78
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.7e-25 Score=221.04 Aligned_cols=203 Identities=19% Similarity=0.191 Sum_probs=128.1
Q ss_pred CCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCc
Q 046036 36 KLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQK 115 (614)
Q Consensus 36 ~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 115 (614)
+++++++++|+++ .+|..+ . .+|++|+|++|++++..+..|.++++|++|+|++|.++...+..|..+++|++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~---~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~ 89 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNI---P---ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLET 89 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCC---C---TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCE
T ss_pred CCCEEEccCCCCC-ccCCCC---C---CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCE
Confidence 3556666666665 344431 1 25566666666666444445666666666666666666444444556666665
Q ss_pred ccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCC
Q 046036 116 LNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLS 195 (614)
Q Consensus 116 L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 195 (614)
|+ |++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|.|++..+..|..++
T Consensus 90 L~------------l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 90 LW------------VTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp EE------------CCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred EE------------CCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 55 666666655555566666666666666666655555566666666666666666655555566666
Q ss_pred CCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcc
Q 046036 196 NTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSG 257 (614)
Q Consensus 196 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 257 (614)
+|+.|++++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|++..
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 77777777777666666666667777777777777775555567777777778887777764
No 79
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.94 E-value=6.1e-27 Score=235.86 Aligned_cols=162 Identities=17% Similarity=0.238 Sum_probs=121.1
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..|||||||++|+|.+++... .+++.....|+.++ |+||||+.++.+||+|||+
T Consensus 141 ~~~~~~~ivmEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGl 216 (346)
T 4fih_A 141 LVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 216 (346)
T ss_dssp EETTEEEEEECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred EECCEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcC
Confidence 4567889999999999999999743 48898888888887 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
|+.+..... .....+||+.||| |. ...|+.++||||+||++|||+||+.||.....
T Consensus 217 a~~~~~~~~-------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------------- 275 (346)
T 4fih_A 217 CAQVSKEVP-------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------------- 275 (346)
T ss_dssp CEECCSSSC-------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------------
T ss_pred ceecCCCCC-------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------------
Confidence 998765432 2456899999988 87 66799999999999999999999999975321
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+. .+.....+.......+.. .+.++...|++.||++|||+.|+++
T Consensus 276 ---~~~~~-~i~~~~~~~~~~~~~~s~-------~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 276 ---LKAMK-MIRDNLPPRLKNLHKVSP-------SLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ---HHHHH-HHHHSSCCCCSCGGGSCH-------HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---HHHHH-HHHcCCCCCCCccccCCH-------HHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111 111111111111111221 2335667999999999999999875
No 80
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.93 E-value=2.4e-27 Score=239.23 Aligned_cols=163 Identities=21% Similarity=0.253 Sum_probs=121.4
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..|+|||||++|+|.++|...+ ...+++.+...|+.++ |+||||++++.+||+|||+
T Consensus 93 ~~~~~~yiVmEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 93 EENGSLYIVMDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp EETTEEEEEEECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred EECCEEEEEEeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEccccc
Confidence 34677899999999999999997542 3457787777777766 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
|+.+.... ...+..+||+.||| |. ...++.++||||+||++|||+||+.||....
T Consensus 172 a~~~~~~~-------~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------------- 229 (350)
T 4b9d_A 172 ARVLNSTV-------ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--------------- 229 (350)
T ss_dssp ESCCCHHH-------HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS---------------
T ss_pred ceeecCCc-------ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC---------------
Confidence 99765421 12345789999988 87 6679999999999999999999999997532
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
..+.+...+.....+.+. .+. + .+.++...|++.||++|||+.|+++
T Consensus 230 --~~~~~~~i~~~~~~~~~~---~~s----~---~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 230 --MKNLVLKIISGSFPPVSL---HYS----Y---DLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp --HHHHHHHHHHTCCCCCCT---TSC----H---HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHHHHHHHcCCCCCCCc---cCC----H---HHHHHHHHHccCChhHCcCHHHHhc
Confidence 122233333332221111 111 1 2335667999999999999999985
No 81
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=1.2e-25 Score=224.19 Aligned_cols=205 Identities=23% Similarity=0.228 Sum_probs=149.9
Q ss_pred hccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCcccc
Q 046036 58 FTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTG 137 (614)
Q Consensus 58 ~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~ 137 (614)
+.+++ +++++++++|.++ .+|..+. ++|+.|+|++|.+++..+..|..+++|++|+ |++|.|++
T Consensus 6 ~~~l~-~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~------------L~~n~l~~ 69 (290)
T 1p9a_G 6 VSKVA-SHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLN------------LDRAELTK 69 (290)
T ss_dssp EECST-TCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEE------------CTTSCCCE
T ss_pred ccccC-CccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEE------------CCCCccCc
Confidence 55666 7888888888887 5666554 5888888888888877777888888888777 88888875
Q ss_pred ccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccC
Q 046036 138 NIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGN 217 (614)
Q Consensus 138 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 217 (614)
..+. ..+++|++|+|++|+++ .+|..+..+++|++|++++|+|++..+..|..+++|++|+|++|++++..+..|..
T Consensus 70 ~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 146 (290)
T 1p9a_G 70 LQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTP 146 (290)
T ss_dssp EECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTT
T ss_pred ccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhccc
Confidence 4432 67788888888888887 66777777788888888888887666667777777777777777777666666667
Q ss_pred cccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCccc
Q 046036 218 RSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQ 282 (614)
Q Consensus 218 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 282 (614)
+++|+.|+|++|++++..+..|..+++|+.|+|++|+++ .+|..+..+++|+.+++++|++.+.
T Consensus 147 l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 147 TPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred ccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 777777777777777555555666777777777777776 4555565666666666666666543
No 82
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=1.6e-25 Score=223.33 Aligned_cols=203 Identities=23% Similarity=0.203 Sum_probs=111.1
Q ss_pred CCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCC
Q 046036 31 LSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKL 110 (614)
Q Consensus 31 ~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 110 (614)
++++++|+++++++|+++ .+|..+ . .+++.|+|++|.+++..|..|..+++|++|+|++|.+++..+. +.+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~---~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l 76 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDL---P---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTL 76 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCC---C---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCC---C---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCC
Confidence 344555556666665555 344331 1 1555566666665555555555555666666666655533221 444
Q ss_pred CCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCccc
Q 046036 111 QNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLE 190 (614)
Q Consensus 111 ~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 190 (614)
++|++|+ |++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+++|++|+|++|+|++..+..
T Consensus 77 ~~L~~L~------------Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 143 (290)
T 1p9a_G 77 PVLGTLD------------LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGL 143 (290)
T ss_dssp TTCCEEE------------CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTT
T ss_pred CcCCEEE------------CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhh
Confidence 5555444 5555555 44445555556666666666655444455555556666666666655544444
Q ss_pred ccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCc
Q 046036 191 VGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLS 256 (614)
Q Consensus 191 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 256 (614)
|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++.
T Consensus 144 ~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 144 LTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 555556666666666655544445555555666666666655 44555555555566666655554
No 83
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.93 E-value=2.8e-29 Score=268.28 Aligned_cols=178 Identities=19% Similarity=0.168 Sum_probs=84.1
Q ss_pred ccceEecCCCccccc----cchhhhccCCCCeeecccccCCCCC-----CCCCCCCCCCCEEEcCCCCCccC----Cccc
Q 046036 124 YSFQLNLAENNLTGN----IPESLENLTSLQILNLSCNHLGGSI-----PKPSGLFSTLSSIDFAHNNFNGS----LPLE 190 (614)
Q Consensus 124 ~l~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~~~~ 190 (614)
+++.|+|++|.++.. ++..+..+++|++|+|++|.+++.. +..+..+++|++|++++|.++.. ++..
T Consensus 200 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 279 (461)
T 1z7x_W 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV 279 (461)
T ss_dssp CCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred CceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHH
Confidence 344555555555532 3444445555555555555544211 11122345555555555555532 3444
Q ss_pred ccCCCCCceeccCCccCCCCccccccC-----cccchHHhccCcccccc----CCccccCCCccceEEccCCcCcccCCc
Q 046036 191 VGSLSNTQELDFSEHMLSDEIPITLGN-----RSKFEHLLLGGNMFQGR----IPPFFGSFKGTIDLNLSHNNLSGTIPK 261 (614)
Q Consensus 191 ~~~l~~L~~L~ls~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 261 (614)
+..+++|++|++++|.+++..+..+.. .++|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++..+.
T Consensus 280 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 280 LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 444555555555555554332222221 13555555555555433 233444455555555555555543333
Q ss_pred ccCC-----CCCCCEEECcCCcCcc----cCC-CccccCCCceEEEecCC
Q 046036 262 ELET-----LPFLENLNLSFNNFEG----QLP-SMSVFTNTSVISIVGNG 301 (614)
Q Consensus 262 ~~~~-----l~~L~~L~ls~N~l~~----~~p-~~~~~~~l~~~~~~~N~ 301 (614)
.+.. .++|+.|++++|.+++ .+| ....+++++.+++.+|+
T Consensus 360 ~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 360 ELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCC
Confidence 2221 4455555555555553 222 22334555555555554
No 84
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=6.8e-25 Score=239.85 Aligned_cols=236 Identities=23% Similarity=0.262 Sum_probs=121.9
Q ss_pred CCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCC
Q 046036 11 FRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLI 90 (614)
Q Consensus 11 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 90 (614)
++|+.|+|++|.|+ .+|. .+++|++|+|++|+|+ .+|. .++ +|++|+|++|++++ +|. .+++|+
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~------~l~-~L~~L~Ls~N~l~~-l~~---~l~~L~ 124 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV------LPP-GLLELSIFSNPLTH-LPA---LPSGLC 124 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC------CCT-TCCEEEECSCCCCC-CCC---CCTTCC
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC------CCC-CCCEEECcCCcCCC-CCC---CCCCcC
Confidence 44555555555554 2332 2344555555555554 2332 122 44555555555542 332 334455
Q ss_pred EEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCC
Q 046036 91 QLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLF 170 (614)
Q Consensus 91 ~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 170 (614)
+|+|++|++++ +|.. +++|+ +|+|++|++++. |. .+.+|+.|++++|.+++ +| ..+
T Consensus 125 ~L~L~~N~l~~-lp~~---l~~L~------------~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~---~~~ 180 (622)
T 3g06_A 125 KLWIFGNQLTS-LPVL---PPGLQ------------ELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-LP---MLP 180 (622)
T ss_dssp EEECCSSCCSC-CCCC---CTTCC------------EEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CC---CCC
T ss_pred EEECCCCCCCc-CCCC---CCCCC------------EEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-Cc---ccC
Confidence 55555555542 3322 24444 444666666632 32 23556666666666653 44 334
Q ss_pred CCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEc
Q 046036 171 STLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNL 250 (614)
Q Consensus 171 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 250 (614)
++|+.|++++|.|++ +|.. +++|+.|++++|.++.. |. .+++|+.|+|++|.|++ +| ..+++|+.|+|
T Consensus 181 ~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l-~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~L 248 (622)
T 3g06_A 181 SGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL-PA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMV 248 (622)
T ss_dssp TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-CC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEEC
T ss_pred CCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-CC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEEC
Confidence 566666666666663 3322 35566666666666532 22 13556666666666663 34 34456666666
Q ss_pred cCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCC
Q 046036 251 SHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGK 302 (614)
Q Consensus 251 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~ 302 (614)
++|+|+ .+|. .+++|+.|++++|+|+..++.+..++++..+++.+|+.
T Consensus 249 s~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l 296 (622)
T 3g06_A 249 SGNRLT-SLPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPL 296 (622)
T ss_dssp CSSCCS-CCCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCC
T ss_pred CCCCCC-cCCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCC
Confidence 666666 3343 44566666666666664433455566666666666654
No 85
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.92 E-value=6.4e-26 Score=234.15 Aligned_cols=162 Identities=17% Similarity=0.238 Sum_probs=120.5
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..|+|||||++|+|.+++... .+++.....|+.++ |+||||+.++.+||+|||+
T Consensus 218 ~~~~~~~iVmEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGl 293 (423)
T 4fie_A 218 LVGDELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 293 (423)
T ss_dssp EETTEEEEEEECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTT
T ss_pred EECCEEEEEEeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCcc
Confidence 4467889999999999999999743 48888888888877 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
|+.+..... .....+||+.||| |. ...|+.++||||+||++|||++|+.||.+...
T Consensus 294 a~~~~~~~~-------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------------- 352 (423)
T 4fie_A 294 CAQVSKEVP-------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-------------- 352 (423)
T ss_dssp CEECCSSCC-------CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------------
T ss_pred ceECCCCCc-------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------------
Confidence 998765432 2456899999988 87 67799999999999999999999999975321
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+. .+.....+.......+.. .+.++...|++.||++|||+.|+++
T Consensus 353 ---~~~~~-~i~~~~~~~~~~~~~~s~-------~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 353 ---LKAMK-MIRDNLPPRLKNLHKVSP-------SLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ---HHHHH-HHHHSCCCCCSCTTSSCH-------HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---HHHHH-HHHcCCCCCCcccccCCH-------HHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111 111111111111111111 2335667999999999999999875
No 86
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=7e-26 Score=228.56 Aligned_cols=226 Identities=19% Similarity=0.183 Sum_probs=126.1
Q ss_pred CCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCC--cCCCCCCEEeccCCcCcccCC----ccccC
Q 046036 36 KLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGI--PKYFNLIQLGLDRNCLAGSIP----FSIGK 109 (614)
Q Consensus 36 ~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 109 (614)
.++.|.+.++.++...-..+..+..++ +|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYS-RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHS-CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccC-ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 356666666655422111111122333 56666666666666666665 666666666666666665433 23334
Q ss_pred CCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCC--C--CCCCCCCCCCCEEEcCCCCCcc
Q 046036 110 LQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGS--I--PKPSGLFSTLSSIDFAHNNFNG 185 (614)
Q Consensus 110 l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~ 185 (614)
+++|++|+ |++|++++..+..|..+++|++|+|++|++.+. + +..+..+++|++|+|++|.++
T Consensus 144 ~~~L~~L~------------Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~- 210 (310)
T 4glp_A 144 KPGLKVLS------------IAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME- 210 (310)
T ss_dssp CSCCCEEE------------EECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-
T ss_pred ccCCCEEE------------eeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-
Confidence 55555554 666666665566666666666666666665431 1 222345666666666666665
Q ss_pred CCcc----cccCCCCCceeccCCccCCCCccccccCc---ccchHHhccCccccccCCccccCCCccceEEccCCcCccc
Q 046036 186 SLPL----EVGSLSNTQELDFSEHMLSDEIPITLGNR---SKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGT 258 (614)
Q Consensus 186 ~~~~----~~~~l~~L~~L~ls~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 258 (614)
.++. .++.+++|++|+|++|.+++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|+|++.
T Consensus 211 ~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~ 287 (310)
T 4glp_A 211 TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA 287 (310)
T ss_dssp CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC
T ss_pred chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC
Confidence 2222 13455666666666666666555555554 46666666666666 4454442 5666666666666643
Q ss_pred CCcccCCCCCCCEEECcCCcCc
Q 046036 259 IPKELETLPFLENLNLSFNNFE 280 (614)
Q Consensus 259 ~p~~~~~l~~L~~L~ls~N~l~ 280 (614)
|. +..+++|+.|++++|+++
T Consensus 288 -~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 288 -PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp -CC-TTSCCCCSCEECSSTTTS
T ss_pred -ch-hhhCCCccEEECcCCCCC
Confidence 22 455566666666666654
No 87
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.92 E-value=4.1e-26 Score=226.35 Aligned_cols=162 Identities=18% Similarity=0.225 Sum_probs=121.3
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..|+|||||++|+|.++|... ..++......++.++ |+|||++.++.+||+|||+
T Consensus 102 ~~~~~~yivmEy~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGl 178 (311)
T 4aw0_A 102 QDDEKLYFGLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGT 178 (311)
T ss_dssp ECSSEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EeCCEEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCC
Confidence 4567889999999999999999753 358888888887777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
|+.+...... ......+||+.||| |. ...++.++||||+||++|||+||+.||.....
T Consensus 179 a~~~~~~~~~-----~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-------------- 239 (311)
T 4aw0_A 179 AKVLSPESKQ-----ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-------------- 239 (311)
T ss_dssp CEECCTTTTC-----CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------------
T ss_pred ceecCCCCCc-----ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------------
Confidence 9987644321 23456799999988 87 66789999999999999999999999975321
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+...+...... |. .+. + .+.++...|++.||++|||++|+..
T Consensus 240 ---~~~~~~i~~~~~~~-p~---~~s----~---~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 240 ---GLIFAKIIKLEYDF-PE---KFF----P---KARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp ---HHHHHHHHHTCCCC-CT---TCC----H---HHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred ---HHHHHHHHcCCCCC-Cc---ccC----H---HHHHHHHHHccCCHhHCcChHHHcC
Confidence 12222222222211 11 111 1 2234667899999999999998753
No 88
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.92 E-value=5.7e-28 Score=258.11 Aligned_cols=281 Identities=19% Similarity=0.147 Sum_probs=164.4
Q ss_pred ccCCCCCCeeeecCCcccc----cCCcCCCCCCCCcEEecccccCcccCCcChhhhcccc---ccccEEEccCCcccc--
Q 046036 7 IGNLFRLQNLNFGNSTVQG----EIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLS---TKLRILDAGGNQFAG-- 77 (614)
Q Consensus 7 ~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~---~~L~~L~L~~N~l~~-- 77 (614)
+..+++|++|+|++|.+++ .++..+..+++|++|+|++|.++...+..+ +..++ .+|++|+|++|.++.
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l--~~~l~~~~~~L~~L~L~~n~i~~~~ 101 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCV--LQGLQTPSCKIQKLSLQNCCLTGAG 101 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHH--HHTTCSTTCCCCEEECTTSCCBGGG
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHH--HHHHhhCCCceeEEEccCCCCCHHH
Confidence 3445566666666666653 234455555666666666666654333222 11121 136666666666652
Q ss_pred --cCCCCCcCCCCCCEEeccCCcCcccCCcccc-----CCCCCCcccccccccccceEecCCCcccccc----chhhhcc
Q 046036 78 --DIPAGIPKYFNLIQLGLDRNCLAGSIPFSIG-----KLQNLQKLNPLATSLYSFQLNLAENNLTGNI----PESLENL 146 (614)
Q Consensus 78 --~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~----~~~~~~l 146 (614)
.++..+..+++|++|+|++|.++...+..+. ..++|++| +|++|++++.. +..+..+
T Consensus 102 ~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L------------~L~~n~l~~~~~~~l~~~l~~~ 169 (461)
T 1z7x_W 102 CGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKL------------QLEYCSLSAASCEPLASVLRAK 169 (461)
T ss_dssp HHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE------------ECTTSCCBGGGHHHHHHHHHHC
T ss_pred HHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEE------------ECCCCCCCHHHHHHHHHHHhhC
Confidence 3355556666666666666666543333222 13345544 47888777533 5556667
Q ss_pred CCCCeeecccccCCCCCCCCCC-----CCCCCCEEEcCCCCCccC----CcccccCCCCCceeccCCccCCCCc-----c
Q 046036 147 TSLQILNLSCNHLGGSIPKPSG-----LFSTLSSIDFAHNNFNGS----LPLEVGSLSNTQELDFSEHMLSDEI-----P 212 (614)
Q Consensus 147 ~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~-----~ 212 (614)
++|++|+|++|.+++..+..+. ..++|++|++++|.++.. ++..+..+++|++|++++|.+++.. +
T Consensus 170 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~ 249 (461)
T 1z7x_W 170 PDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCP 249 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHH
Confidence 7888888887777643222222 245777788887777753 4556667777777777777776432 2
Q ss_pred ccccCcccchHHhccCcccccc----CCccccCCCccceEEccCCcCcccCCcccC-----CCCCCCEEECcCCcCcccC
Q 046036 213 ITLGNRSKFEHLLLGGNMFQGR----IPPFFGSFKGTIDLNLSHNNLSGTIPKELE-----TLPFLENLNLSFNNFEGQL 283 (614)
Q Consensus 213 ~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~ls~N~l~~~~ 283 (614)
..+..+++|++|++++|.++.. ++..+..+++|+.|++++|.+++..+..+. ..++|+.|++++|.+++..
T Consensus 250 ~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 329 (461)
T 1z7x_W 250 GLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAAC 329 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred HHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHH
Confidence 2233567777777777777643 455666677777777777777654333332 2357777777777776541
Q ss_pred ----C-CccccCCCceEEEecCC
Q 046036 284 ----P-SMSVFTNTSVISIVGNG 301 (614)
Q Consensus 284 ----p-~~~~~~~l~~~~~~~N~ 301 (614)
+ .....++++.+++++|.
T Consensus 330 ~~~l~~~l~~~~~L~~L~Ls~n~ 352 (461)
T 1z7x_W 330 CSHFSSVLAQNRFLLELQISNNR 352 (461)
T ss_dssp HHHHHHHHHHCSSCCEEECCSSB
T ss_pred HHHHHHHHhhCCCccEEEccCCc
Confidence 1 12334667777777774
No 89
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.92 E-value=1.6e-25 Score=222.23 Aligned_cols=154 Identities=19% Similarity=0.253 Sum_probs=113.1
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..|+|||||++|||.++|... ..+++.....++.++ |+|||+++++.+||+|||+|
T Consensus 97 ~~~~~~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla 173 (304)
T 3ubd_A 97 TEGKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173 (304)
T ss_dssp ETTEEEEEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEE
T ss_pred ECCEEEEEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccc
Confidence 456789999999999999999753 358888888887777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
+...... ......+||+.||| |. ...++.++||||+||++|||+||+.||.....
T Consensus 174 ~~~~~~~-------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--------------- 231 (304)
T 3ubd_A 174 KESIDHE-------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--------------- 231 (304)
T ss_dssp EC------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------------
T ss_pred eeccCCC-------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH---------------
Confidence 8765432 22345789999988 87 67899999999999999999999999975321
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGV 583 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm 583 (614)
.+.+......... .|. ..+ . .+.++...|++.||++|||+
T Consensus 232 --~~~~~~i~~~~~~-~p~---~~s----~---~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 232 --KETMTMILKAKLG-MPQ---FLS----P---EAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --HHHHHHHHHCCCC-CCT---TSC----H---HHHHHHHHHTCSSGGGSTTC
T ss_pred --HHHHHHHHcCCCC-CCC---cCC----H---HHHHHHHHHcccCHHHCCCC
Confidence 1222222222211 111 111 1 23356679999999999985
No 90
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=4e-24 Score=233.71 Aligned_cols=227 Identities=29% Similarity=0.337 Sum_probs=188.8
Q ss_pred CCccccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCC
Q 046036 3 VPQEIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAG 82 (614)
Q Consensus 3 ip~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~ 82 (614)
||. .+++|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|.. ++ +|+.|+|++|+++ .+|..
T Consensus 76 lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~~------l~-~L~~L~L~~N~l~-~lp~~ 139 (622)
T 3g06_A 76 LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPAL------PS-GLCKLWIFGNQLT-SLPVL 139 (622)
T ss_dssp CCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCCC------CT-TCCEEECCSSCCS-CCCCC
T ss_pred CCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCCC------CC-CcCEEECCCCCCC-cCCCC
Confidence 555 5789999999999999 4665 67899999999999995 4542 33 8999999999998 46654
Q ss_pred CcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCC
Q 046036 83 IPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGS 162 (614)
Q Consensus 83 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 162 (614)
+++|++|+|++|++++ +|.. +.+|+.|+ +++|.|++ +| ..+++|+.|+|++|.+++
T Consensus 140 ---l~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~------------L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 140 ---PPGLQELSVSDNQLAS-LPAL---PSELCKLW------------AYNNQLTS-LP---MLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp ---CTTCCEEECCSSCCSC-CCCC---CTTCCEEE------------CCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred ---CCCCCEEECcCCcCCC-cCCc---cCCCCEEE------------CCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-
Confidence 4899999999999985 4543 35666666 99999995 55 557999999999999994
Q ss_pred CCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCC
Q 046036 163 IPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSF 242 (614)
Q Consensus 163 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 242 (614)
+|.. +++|+.|++++|.++ .+|. .+++|+.|++++|.+++ +| ..+++|+.|+|++|.|+ .+|. .+
T Consensus 196 l~~~---~~~L~~L~L~~N~l~-~l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~ 260 (622)
T 3g06_A 196 LPTL---PSELYKLWAYNNRLT-SLPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LP 260 (622)
T ss_dssp CCCC---CTTCCEEECCSSCCS-SCCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CC
T ss_pred CCCc---cchhhEEECcCCccc-ccCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---cc
Confidence 5543 479999999999998 4554 35889999999999987 44 45688999999999998 5665 67
Q ss_pred CccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCC
Q 046036 243 KGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPS 285 (614)
Q Consensus 243 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 285 (614)
++|+.|+|++|+|+ .+|..+..+++|+.|++++|++++.+|.
T Consensus 261 ~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 261 SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred ccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 89999999999999 7788999999999999999999987653
No 91
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=9.3e-25 Score=220.31 Aligned_cols=203 Identities=19% Similarity=0.160 Sum_probs=105.1
Q ss_pred CCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCC----CCCcCCCCCCEEeccCCcCcccCCccccCC
Q 046036 35 SKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIP----AGIPKYFNLIQLGLDRNCLAGSIPFSIGKL 110 (614)
Q Consensus 35 ~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 110 (614)
++|++|+|++|.+++..|..+.. ..++ +|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|+.+
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~-~~~~-~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLE-ATGL-ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSS-CCCB-CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred CceeEEEeeCCEeccchhhhhhh-ccCC-CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 34555555555555555544200 4444 55555555555554333 122345555555555555555555555555
Q ss_pred CCCCcccccccccccceEecCCCccccc--c--chhhhccCCCCeeecccccCCCCCCC----CCCCCCCCCEEEcCCCC
Q 046036 111 QNLQKLNPLATSLYSFQLNLAENNLTGN--I--PESLENLTSLQILNLSCNHLGGSIPK----PSGLFSTLSSIDFAHNN 182 (614)
Q Consensus 111 ~~L~~L~l~~~~~~l~~L~L~~N~l~~~--~--~~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~ 182 (614)
++|++|+ |++|++.+. + +..+..+++|++|+|++|+++ .++. .+..+++|++|+|++|.
T Consensus 169 ~~L~~L~------------Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~ 235 (310)
T 4glp_A 169 PALTSLD------------LSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNS 235 (310)
T ss_dssp TTCCEEE------------CCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSC
T ss_pred CCCCEEE------------CCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCC
Confidence 5555554 555554431 1 111245555555555555554 1221 12344555555555555
Q ss_pred CccCCcccccCC---CCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcc
Q 046036 183 FNGSLPLEVGSL---SNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSG 257 (614)
Q Consensus 183 l~~~~~~~~~~l---~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 257 (614)
|++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|++++. |. +..+++|+.|+|++|+++.
T Consensus 236 l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 236 LRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 555545444444 45666666666665 3344442 5666666666666643 32 4566777777777777763
No 92
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.92 E-value=6.1e-27 Score=244.02 Aligned_cols=245 Identities=20% Similarity=0.233 Sum_probs=131.0
Q ss_pred CCcCCCCCCCCcEEecccccCcccCCcChhh-hccccccccEEEccCC---cccccCCCCC-------cCCCCCCEEecc
Q 046036 27 IPSHLSPTSKLTYLSLFSNNLHGIIPPSLDS-FTNLSTKLRILDAGGN---QFAGDIPAGI-------PKYFNLIQLGLD 95 (614)
Q Consensus 27 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~~l~~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~ 95 (614)
++..+..+++|++|+|++|.++...+..+.. +..++ +|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~-~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKK-DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCT-TCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCC-CccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 3344444555555555555555432222111 33343 5555555553 2233333322 445555555555
Q ss_pred CCcCcc----cCCccccCCCCCCcccccccccccceEecCCCccccccchhhh----cc---------CCCCeeeccccc
Q 046036 96 RNCLAG----SIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLE----NL---------TSLQILNLSCNH 158 (614)
Q Consensus 96 ~N~l~~----~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~----~l---------~~L~~L~L~~N~ 158 (614)
+|.++. .+|..+..+++|++|+ |++|.++...+..+. .+ ++|++|+|++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~------------L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLY------------LHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNR 170 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEE------------CCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEE------------CcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCC
Confidence 555554 2444555555555554 555555433332222 22 566666666666
Q ss_pred CC-CCCC---CCCCCCCCCCEEEcCCCCCcc-----CCcccccCCCCCceeccCCccCC----CCccccccCcccchHHh
Q 046036 159 LG-GSIP---KPSGLFSTLSSIDFAHNNFNG-----SLPLEVGSLSNTQELDFSEHMLS----DEIPITLGNRSKFEHLL 225 (614)
Q Consensus 159 l~-~~~p---~~~~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~ls~N~l~----~~~~~~~~~l~~L~~L~ 225 (614)
++ +.++ ..+..+++|++|++++|.|+. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 54 2222 233445566666666665551 22324555666666666666654 34455556666666666
Q ss_pred ccCcccccc----CCcccc--CCCccceEEccCCcCcc----cCCccc-CCCCCCCEEECcCCcCcccCC
Q 046036 226 LGGNMFQGR----IPPFFG--SFKGTIDLNLSHNNLSG----TIPKEL-ETLPFLENLNLSFNNFEGQLP 284 (614)
Q Consensus 226 L~~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~ls~N~l~~~~p 284 (614)
|++|.+++. ++..+. .+++|+.|+|++|.+++ .+|..+ ..+++|+.|++++|++++..+
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 666666543 344553 37778888888888776 366655 557788888888888776553
No 93
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.92 E-value=2.1e-27 Score=247.54 Aligned_cols=244 Identities=18% Similarity=0.214 Sum_probs=150.9
Q ss_pred CCccccCCCCCCeeeecCCcccccC----CcCCCCCCCCcEEecccc---cCcccCCcChhh----hccccccccEEEcc
Q 046036 3 VPQEIGNLFRLQNLNFGNSTVQGEI----PSHLSPTSKLTYLSLFSN---NLHGIIPPSLDS----FTNLSTKLRILDAG 71 (614)
Q Consensus 3 ip~~~~~l~~L~~L~L~~n~l~~~~----p~~~~~l~~L~~L~L~~N---~l~~~~p~~~~~----~~~l~~~L~~L~L~ 71 (614)
++..+.++++|++|+|++|.+++.. +..|..+++|++|+|++| ++++.+|..+.. +..++ +|++|+|+
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~-~L~~L~Ls 102 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCP-KLHTVRLS 102 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCT-TCCEEECC
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCC-cccEEECC
Confidence 4555666677777777777776543 334666777777777764 344444544321 24555 67777777
Q ss_pred CCcccc----cCCCCCcCCCCCCEEeccCCcCcccCCccccC----C---------CCCCcccccccccccceEecCCCc
Q 046036 72 GNQFAG----DIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGK----L---------QNLQKLNPLATSLYSFQLNLAENN 134 (614)
Q Consensus 72 ~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----l---------~~L~~L~l~~~~~~l~~L~L~~N~ 134 (614)
+|.++. .+|..+..+++|++|+|++|.++...+..+.. + ++|++|+ |++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~------------L~~n~ 170 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSII------------CGRNR 170 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEE------------CCSSC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEE------------CCCCC
Confidence 777765 35556666777777777777775443333332 2 5555554 77777
Q ss_pred cc-cccc---hhhhccCCCCeeecccccCCC-----CCCCCCCCCCCCCEEEcCCCCCc----cCCcccccCCCCCceec
Q 046036 135 LT-GNIP---ESLENLTSLQILNLSCNHLGG-----SIPKPSGLFSTLSSIDFAHNNFN----GSLPLEVGSLSNTQELD 201 (614)
Q Consensus 135 l~-~~~~---~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~ 201 (614)
++ +.++ ..+..+++|++|+|++|+++. ..+..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 76 3333 355667777777777777662 23335666677777777777775 45566666777777777
Q ss_pred cCCccCCCC----ccccc--cCcccchHHhccCccccc----cCCccc-cCCCccceEEccCCcCcccC
Q 046036 202 FSEHMLSDE----IPITL--GNRSKFEHLLLGGNMFQG----RIPPFF-GSFKGTIDLNLSHNNLSGTI 259 (614)
Q Consensus 202 ls~N~l~~~----~~~~~--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~ 259 (614)
|++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|++|+|++|++++..
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 777777654 34444 236677777777777765 355555 45677777777777777554
No 94
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=8.7e-25 Score=211.82 Aligned_cols=196 Identities=14% Similarity=0.126 Sum_probs=127.4
Q ss_pred CCcEEecccccCcccCCcChhhhccccccccEEEccCCc-ccccCCCCCcCCCCCCEEeccC-CcCcccCCccccCCCCC
Q 046036 36 KLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQ-FAGDIPAGIPKYFNLIQLGLDR-NCLAGSIPFSIGKLQNL 113 (614)
Q Consensus 36 ~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L 113 (614)
+|++|+|++|++++..+.. |.+++ +|++|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~---~~~l~-~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L 107 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHA---FSNLP-NISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLL 107 (239)
T ss_dssp TCCEEEEESCCCSEECTTT---TTTCT-TCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTC
T ss_pred cccEEEEeCCcceEECHHH---ccCCC-CCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCC
Confidence 6667777777776555545 55555 66677777775 6655555666667777777766 66665555666666666
Q ss_pred CcccccccccccceEecCCCccccccchhhhccCCCC---eeecccc-cCCCCCCCCCCCCCCCC-EEEcCCCCCccCCc
Q 046036 114 QKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQ---ILNLSCN-HLGGSIPKPSGLFSTLS-SIDFAHNNFNGSLP 188 (614)
Q Consensus 114 ~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~~ 188 (614)
++|+ +++|++++ +|. |..+++|+ +|++++| .+++..+..+..+++|+ .|++++|.++ .+|
T Consensus 108 ~~L~------------l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~ 172 (239)
T 2xwt_C 108 KFLG------------IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQ 172 (239)
T ss_dssp CEEE------------EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EEC
T ss_pred CEEe------------CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccC
Confidence 6665 66676664 443 66666666 7777777 66655555566777777 7777777776 333
Q ss_pred ccccCCCCCceeccCCcc-CCCCccccccCc-ccchHHhccCccccccCCccccCCCccceEEccCC
Q 046036 189 LEVGSLSNTQELDFSEHM-LSDEIPITLGNR-SKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHN 253 (614)
Q Consensus 189 ~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 253 (614)
......++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 173 ~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 173 GYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp TTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred HhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 332233677777777774 766666667777 777777777777774 3432 5667777777765
No 95
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=1e-26 Score=239.97 Aligned_cols=256 Identities=18% Similarity=0.194 Sum_probs=174.8
Q ss_pred eeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcCh-hhhccccccccEEEccCCcccccCCCCCcCC-----CC
Q 046036 15 NLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSL-DSFTNLSTKLRILDAGGNQFAGDIPAGIPKY-----FN 88 (614)
Q Consensus 15 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l-----~~ 88 (614)
.++|++|.+++.+|+.+...++|++|+|++|.+++..+..+ ..+.+++.+|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46778888888888777777778888888888886554211 1145554368888888888876666666554 78
Q ss_pred CCEEeccCCcCcccCCccccC----C-CCCCcccccccccccceEecCCCccccccchhhhc-----cCCCCeeeccccc
Q 046036 89 LIQLGLDRNCLAGSIPFSIGK----L-QNLQKLNPLATSLYSFQLNLAENNLTGNIPESLEN-----LTSLQILNLSCNH 158 (614)
Q Consensus 89 L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~ 158 (614)
|++|+|++|.+++..+..+.. + ++|++|+ |++|++++..+..+.. .++|++|+|++|.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~------------Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 149 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLD------------LGWNDFSSKSSSEFKQAFSNLPASITSLNLRGND 149 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEE------------CCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEE------------CcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCc
Confidence 888888888887666654433 3 6676666 8888888766655543 2588888888888
Q ss_pred CCCCCC----CCCCCCC-CCCEEEcCCCCCccCCccccc----CC-CCCceeccCCccCCCC----ccccccC-cccchH
Q 046036 159 LGGSIP----KPSGLFS-TLSSIDFAHNNFNGSLPLEVG----SL-SNTQELDFSEHMLSDE----IPITLGN-RSKFEH 223 (614)
Q Consensus 159 l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~----~l-~~L~~L~ls~N~l~~~----~~~~~~~-l~~L~~ 223 (614)
+++..+ ..+..++ +|++|+|++|.|++..+..+. .+ ++|++|+|++|.+++. ++..+.. .++|++
T Consensus 150 l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~ 229 (362)
T 3goz_A 150 LGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVS 229 (362)
T ss_dssp GGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCE
T ss_pred CCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceE
Confidence 874332 2223444 788888888888766665443 33 5888888888888763 3334444 347888
Q ss_pred HhccCccccccCC----ccccCCCccceEEccCCcCcccC-------CcccCCCCCCCEEECcCCcCccc
Q 046036 224 LLLGGNMFQGRIP----PFFGSFKGTIDLNLSHNNLSGTI-------PKELETLPFLENLNLSFNNFEGQ 282 (614)
Q Consensus 224 L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~-------p~~~~~l~~L~~L~ls~N~l~~~ 282 (614)
|+|++|.+++..+ ..+..+++|+.|+|++|.+.+.. +..+..+++|+.||+++|++...
T Consensus 230 L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 230 LNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp EECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred EECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 8888888775443 23456678888888888854332 23566777888888888887654
No 96
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.91 E-value=7.3e-25 Score=214.40 Aligned_cols=158 Identities=18% Similarity=0.254 Sum_probs=107.1
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..|+||||| +|+|.+++..+ ..+++.....++.|+ |+|||+++++.+||+|||+
T Consensus 83 ~~~~~~~ivmEy~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGl 158 (275)
T 3hyh_A 83 KSKDEIIMVIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL 158 (275)
T ss_dssp ECSSEEEEEEECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSC
T ss_pred EECCEEEEEEeCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCC
Confidence 4567789999999 68999999754 358888888888877 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCC-CCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VAR-YQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~-~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
|+...... .....+||+.||| |. ... ++.++||||+||++|||+||+.||.+...
T Consensus 159 a~~~~~~~--------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~------------- 217 (275)
T 3hyh_A 159 SNIMTDGN--------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------------- 217 (275)
T ss_dssp C-----------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------------
T ss_pred CeecCCCC--------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-------------
Confidence 98765432 2345789999987 87 334 46899999999999999999999975311
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+........... .|. ..+ + .+.++..+|++.||++|||++|+++
T Consensus 218 ----~~~~~~i~~~~~~-~p~---~~s----~---~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 218 ----PVLFKNISNGVYT-LPK---FLS----P---GAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ----HHHHHHHHHTCCC-CCT---TSC----H---HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ----HHHHHHHHcCCCC-CCC---CCC----H---HHHHHHHHHccCChhHCcCHHHHHc
Confidence 1111111111111 111 111 1 2235667999999999999999976
No 97
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.91 E-value=3.1e-25 Score=220.94 Aligned_cols=167 Identities=19% Similarity=0.274 Sum_probs=106.6
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
+.+.|+|||||++|+|.+++.........++.....|+.|+ |+|||++.++.+||+|||+|+
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~ 166 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVT 166 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-
T ss_pred CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccce
Confidence 34579999999999999999876544556777666666665 999999999999999999999
Q ss_pred ccCCCCCCCC-----CCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 455 FLPTNVTNPM-----KGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 455 ~~~~~~~~~~-----~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
.+........ ......+..+||+.||| |. ...++.++|||||||++|||++ ||...... .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~---~------ 234 (299)
T 4g31_A 167 AMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER---V------ 234 (299)
T ss_dssp -------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---H------
T ss_pred ecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH---H------
Confidence 8765432100 01122345789999987 87 6789999999999999999996 77532110 0
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
..+........ ++. ..+......++..+|++.+|++|||+.|+++
T Consensus 235 -------~~~~~~~~~~~------p~~----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 -------RTLTDVRNLKF------PPL----FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -------HHHHHHHTTCC------CHH----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------HHHHHHhcCCC------CCC----CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00101111000 011 1122223345777999999999999999875
No 98
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=2.7e-24 Score=208.42 Aligned_cols=196 Identities=16% Similarity=0.180 Sum_probs=155.5
Q ss_pred cccEEEccCCcccccCCCCCcCCCCCCEEeccCCc-CcccCCccccCCCCCCcccccccccccceEecCC-Cccccccch
Q 046036 64 KLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNC-LAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAE-NNLTGNIPE 141 (614)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~-N~l~~~~~~ 141 (614)
+|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+ |++ |++++..+.
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~------------l~~~n~l~~i~~~ 99 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIE------------IRNTRNLTYIDPD 99 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEE------------EEEETTCCEECTT
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEE------------CCCCCCeeEcCHH
Confidence 78899999999987777788899999999999997 8877777888888888887 888 889877777
Q ss_pred hhhccCCCCeeecccccCCCCCCCCCCCCCCCC---EEEcCCC-CCccCCcccccCCCCCc-eeccCCccCCCCcccccc
Q 046036 142 SLENLTSLQILNLSCNHLGGSIPKPSGLFSTLS---SIDFAHN-NFNGSLPLEVGSLSNTQ-ELDFSEHMLSDEIPITLG 216 (614)
Q Consensus 142 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~L~-~L~ls~N~l~~~~~~~~~ 216 (614)
.|..+++|++|++++|++++ +|. +..+++|+ +|++++| .+++..+..|..+++|+ .|++++|.++...+..|.
T Consensus 100 ~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~ 177 (239)
T 2xwt_C 100 ALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFN 177 (239)
T ss_dssp SEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTT
T ss_pred HhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcC
Confidence 88899999999999999885 665 77888888 8999998 88876667788888888 888888888744444444
Q ss_pred CcccchHHhccCcc-ccccCCccccCC-CccceEEccCCcCcccCCcccCCCCCCCEEECcCC
Q 046036 217 NRSKFEHLLLGGNM-FQGRIPPFFGSF-KGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFN 277 (614)
Q Consensus 217 ~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 277 (614)
. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++. |.. .+++|+.|+++++
T Consensus 178 ~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 178 G-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp T-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred C-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 4 778888888884 776666677777 7888888888888743 332 5667777777665
No 99
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=8e-24 Score=213.04 Aligned_cols=190 Identities=25% Similarity=0.361 Sum_probs=88.3
Q ss_pred cccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhh
Q 046036 64 KLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESL 143 (614)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~ 143 (614)
+|++|++++|.++ .+| .+..+++|++|+|++|.+++..+ +..+++|++|+ |++|++++. ..+
T Consensus 42 ~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~------------L~~n~l~~~--~~~ 103 (308)
T 1h6u_A 42 GITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELE------------LSGNPLKNV--SAI 103 (308)
T ss_dssp TCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEE------------CCSCCCSCC--GGG
T ss_pred CcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEE------------ccCCcCCCc--hhh
Confidence 4444444444443 222 24444444444444444442222 44444444333 444444422 134
Q ss_pred hccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchH
Q 046036 144 ENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEH 223 (614)
Q Consensus 144 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 223 (614)
..+++|++|+|++|++++ ++. +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.
T Consensus 104 ~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~ 177 (308)
T 1h6u_A 104 AGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTT 177 (308)
T ss_dssp TTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred cCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCE
Confidence 444444444444444442 221 4444455555555555443222 4445555555555555543322 445555555
Q ss_pred HhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcc
Q 046036 224 LLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEG 281 (614)
Q Consensus 224 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 281 (614)
|++++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++
T Consensus 178 L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 178 LKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp EECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred EECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 5555555543222 4555566666666666654332 5556666666666666554
No 100
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=3e-23 Score=202.54 Aligned_cols=179 Identities=21% Similarity=0.235 Sum_probs=121.8
Q ss_pred CCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCE
Q 046036 12 RLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQ 91 (614)
Q Consensus 12 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 91 (614)
+.+.++++++.++ .+|..+. ++|++|+|++|++++..+.. |.+++ +|++|+|++|.+++..|..|..+++|++
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~---~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 87 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDAT---FRGLT-KLTWLNLDYNQLQTLSAGVFDDLTELGT 87 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTT---TTTCT-TCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhH---hcCcc-cCCEEECCCCcCCccCHhHhccCCcCCE
Confidence 4566777777777 4555554 46777777777777666655 55565 7777777777777666666777777777
Q ss_pred EeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCC
Q 046036 92 LGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFS 171 (614)
Q Consensus 92 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 171 (614)
|+|++|++++..+..|..+++|++|+ |++|+|++..+..|..+++|++|+|++|+|++..+..+..++
T Consensus 88 L~L~~n~l~~~~~~~~~~l~~L~~L~------------L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 155 (251)
T 3m19_A 88 LGLANNQLASLPLGVFDHLTQLDKLY------------LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155 (251)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEE------------CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred EECCCCcccccChhHhcccCCCCEEE------------cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCc
Confidence 77777777766666666666666665 777777766555666777777777777777755555666677
Q ss_pred CCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCC
Q 046036 172 TLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSD 209 (614)
Q Consensus 172 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 209 (614)
+|++|+|++|.|++..+..|..+++|+.|+|++|.++.
T Consensus 156 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 77777777777766555566666677777777766654
No 101
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.2e-23 Score=203.46 Aligned_cols=180 Identities=23% Similarity=0.267 Sum_probs=103.4
Q ss_pred cccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhh
Q 046036 64 KLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESL 143 (614)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~ 143 (614)
+.++++++++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+ |++|.|++..+..|
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~------------L~~n~l~~~~~~~~ 79 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLN------------LDYNQLQTLSAGVF 79 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEE------------CTTSCCCCCCTTTT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEE------------CCCCcCCccCHhHh
Confidence 4556677766665 4555444 3666666666666655555566555555555 66666665555555
Q ss_pred hccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchH
Q 046036 144 ENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEH 223 (614)
Q Consensus 144 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 223 (614)
..+++|++|+|++|++++..+..+..+++|++|+|++|.|++..+..|..+++|++|+|++|
T Consensus 80 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N------------------ 141 (251)
T 3m19_A 80 DDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN------------------ 141 (251)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS------------------
T ss_pred ccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCC------------------
Confidence 56666666666666665444444555555555555555555433333444444444444444
Q ss_pred HhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCccc
Q 046036 224 LLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQ 282 (614)
Q Consensus 224 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 282 (614)
.+++..+..|+.+++|+.|+|++|++++..+..|..+++|+.|++++|++++.
T Consensus 142 ------~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 142 ------QLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp ------CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ------cCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 44433344455566666666666666655555666666666666666666655
No 102
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=5.8e-26 Score=231.99 Aligned_cols=221 Identities=16% Similarity=0.171 Sum_probs=104.8
Q ss_pred CCeeeecCCcccccCCcCCCCC--CCCcEEecccccCcccCCcChhhhccccccccEEEccCCccccc-CCCCCcCCCCC
Q 046036 13 LQNLNFGNSTVQGEIPSHLSPT--SKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGD-IPAGIPKYFNL 89 (614)
Q Consensus 13 L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~-~p~~~~~l~~L 89 (614)
++.|++++|.+. +..+..+ ++++.|++++|.+++..+.. ..++ +|++|+|++|.+++. +|..+..+++|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~----~~~~-~L~~L~L~~~~l~~~~~~~~~~~~~~L 120 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEH----FSPF-RVQHMDLSNSVIEVSTLHGILSQCSKL 120 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSC----CCCB-CCCEEECTTCEECHHHHHHHHTTBCCC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhh----ccCC-CCCEEEccCCCcCHHHHHHHHhhCCCC
Confidence 445555555444 2333333 45555555555555443332 2333 555555555555433 44444555555
Q ss_pred CEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCC-ccccc-cchhhhccCCCCeeecccc-cCCCC-CCC
Q 046036 90 IQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAEN-NLTGN-IPESLENLTSLQILNLSCN-HLGGS-IPK 165 (614)
Q Consensus 90 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~p~ 165 (614)
++|+|++|.+++..+..++.+++|++|+ |++| .+++. ++..+..+++|++|++++| .+++. ++.
T Consensus 121 ~~L~L~~~~l~~~~~~~l~~~~~L~~L~------------L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 188 (336)
T 2ast_B 121 QNLSLEGLRLSDPIVNTLAKNSNLVRLN------------LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 188 (336)
T ss_dssp SEEECTTCBCCHHHHHHHTTCTTCSEEE------------CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH
T ss_pred CEEeCcCcccCHHHHHHHhcCCCCCEEE------------CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH
Confidence 5555555555544555555555555444 5555 34431 3444555555555555555 44422 233
Q ss_pred CCCCCC-CCCEEEcCCC--CCc-cCCcccccCCCCCceeccCCcc-CCCCccccccCcccchHHhccCcc-ccccCCccc
Q 046036 166 PSGLFS-TLSSIDFAHN--NFN-GSLPLEVGSLSNTQELDFSEHM-LSDEIPITLGNRSKFEHLLLGGNM-FQGRIPPFF 239 (614)
Q Consensus 166 ~~~~l~-~L~~L~Ls~N--~l~-~~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~ 239 (614)
.+..++ +|++|++++| .++ +.++..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +.......+
T Consensus 189 ~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l 268 (336)
T 2ast_B 189 AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLEL 268 (336)
T ss_dssp HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGG
T ss_pred HHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHH
Confidence 344444 5555555555 233 2334444445555555555555 444444445555555555555553 111111134
Q ss_pred cCCCccceEEccCC
Q 046036 240 GSFKGTIDLNLSHN 253 (614)
Q Consensus 240 ~~l~~L~~L~Ls~N 253 (614)
..+++|+.|++++|
T Consensus 269 ~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 269 GEIPTLKTLQVFGI 282 (336)
T ss_dssp GGCTTCCEEECTTS
T ss_pred hcCCCCCEEeccCc
Confidence 44555555555554
No 103
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=8.4e-26 Score=233.15 Aligned_cols=247 Identities=15% Similarity=0.161 Sum_probs=191.9
Q ss_pred CCCccccCCCCCCeeeecCCcccccCC----cCCCCCC-CCcEEecccccCcccCCcChhhh-ccc-cccccEEEccCCc
Q 046036 2 NVPQEIGNLFRLQNLNFGNSTVQGEIP----SHLSPTS-KLTYLSLFSNNLHGIIPPSLDSF-TNL-STKLRILDAGGNQ 74 (614)
Q Consensus 2 ~ip~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~~-~~l-~~~L~~L~L~~N~ 74 (614)
.+|..+...++|++|+|++|.+++..+ +.|..++ +|++|+|++|++++..+..+..+ ... + +|++|+|++|.
T Consensus 13 ~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~-~L~~L~Ls~n~ 91 (362)
T 3goz_A 13 PVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA-NVTSLNLSGNF 91 (362)
T ss_dssp HHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT-TCCEEECCSSC
T ss_pred HHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC-CccEEECcCCc
Confidence 355555666679999999999998777 7888898 99999999999998777664332 222 5 89999999999
Q ss_pred ccccCCCCC----cCC-CCCCEEeccCCcCcccCCccccC-----CCCCCcccccccccccceEecCCCccccccc----
Q 046036 75 FAGDIPAGI----PKY-FNLIQLGLDRNCLAGSIPFSIGK-----LQNLQKLNPLATSLYSFQLNLAENNLTGNIP---- 140 (614)
Q Consensus 75 l~~~~p~~~----~~l-~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~---- 140 (614)
+++..+..+ ..+ ++|++|+|++|.+++..+..+.. .++|++|+ |++|+++...+
T Consensus 92 l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~------------Ls~N~l~~~~~~~l~ 159 (362)
T 3goz_A 92 LSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLN------------LRGNDLGIKSSDELI 159 (362)
T ss_dssp GGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEE------------CTTSCGGGSCHHHHH
T ss_pred CChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEE------------ccCCcCCHHHHHHHH
Confidence 987666544 444 89999999999998776655443 25777776 99999996444
Q ss_pred hhhhccC-CCCeeecccccCCCCCCCCC----CCC-CCCCEEEcCCCCCccC----CcccccC-CCCCceeccCCccCCC
Q 046036 141 ESLENLT-SLQILNLSCNHLGGSIPKPS----GLF-STLSSIDFAHNNFNGS----LPLEVGS-LSNTQELDFSEHMLSD 209 (614)
Q Consensus 141 ~~~~~l~-~L~~L~L~~N~l~~~~p~~~----~~l-~~L~~L~Ls~N~l~~~----~~~~~~~-l~~L~~L~ls~N~l~~ 209 (614)
..+..++ +|++|+|++|++++..+..+ ... ++|++|+|++|.|+.. ++..+.. .++|++|+|++|.+++
T Consensus 160 ~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 160 QILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred HHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 4455665 99999999999986655433 344 5999999999999863 4445555 4599999999999987
Q ss_pred Ccc----ccccCcccchHHhccCccccccCC-------ccccCCCccceEEccCCcCcccCCc
Q 046036 210 EIP----ITLGNRSKFEHLLLGGNMFQGRIP-------PFFGSFKGTIDLNLSHNNLSGTIPK 261 (614)
Q Consensus 210 ~~~----~~~~~l~~L~~L~L~~N~l~~~~p-------~~~~~l~~L~~L~Ls~N~l~~~~p~ 261 (614)
..+ ..+..+++|+.|+|++|.+.+..+ ..+..+++|+.||+++|++....+.
T Consensus 240 ~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 240 PSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp CCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred HHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 655 345778999999999999654333 3567889999999999999876443
No 104
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.4e-23 Score=211.20 Aligned_cols=211 Identities=20% Similarity=0.293 Sum_probs=150.6
Q ss_pred CCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEE
Q 046036 13 LQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQL 92 (614)
Q Consensus 13 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 92 (614)
+..+.+..+.+++.++ +..+++|++|++++|.++. +| . +..++ +|++|+|++|.+++. +. +..+++|++|
T Consensus 21 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~---~~~l~-~L~~L~L~~n~i~~~-~~-~~~l~~L~~L 90 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-G---VQYLN-NLIGLELKDNQITDL-AP-LKNLTKITEL 90 (308)
T ss_dssp HHHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-T---GGGCT-TCCEEECCSSCCCCC-GG-GTTCCSCCEE
T ss_pred HHHHHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-h---hhccC-CCCEEEccCCcCCCC-hh-HccCCCCCEE
Confidence 3344555555554332 4567778888888887773 34 3 56666 788888888888743 33 7778888888
Q ss_pred eccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCC
Q 046036 93 GLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFST 172 (614)
Q Consensus 93 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 172 (614)
+|++|++++. + .+..+++|++|+ |++|++++. + .+..+++|++|++++|.+++..+ +..+++
T Consensus 91 ~L~~n~l~~~-~-~~~~l~~L~~L~------------l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~ 152 (308)
T 1h6u_A 91 ELSGNPLKNV-S-AIAGLQSIKTLD------------LTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTN 152 (308)
T ss_dssp ECCSCCCSCC-G-GGTTCTTCCEEE------------CTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTT
T ss_pred EccCCcCCCc-h-hhcCCCCCCEEE------------CCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCC
Confidence 8888887743 3 577777777666 888888753 3 37788888888888888874433 677788
Q ss_pred CCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccC
Q 046036 173 LSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSH 252 (614)
Q Consensus 173 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 252 (614)
|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++.. .+..+++|+.|++++
T Consensus 153 L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~ 226 (308)
T 1h6u_A 153 LQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTN 226 (308)
T ss_dssp CCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEE
T ss_pred ccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccC
Confidence 8888888888875333 7778888888888888876544 777888888888888887544 377888888888888
Q ss_pred CcCcc
Q 046036 253 NNLSG 257 (614)
Q Consensus 253 N~l~~ 257 (614)
|++++
T Consensus 227 N~i~~ 231 (308)
T 1h6u_A 227 QTITN 231 (308)
T ss_dssp EEEEC
T ss_pred Ceeec
Confidence 88874
No 105
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.90 E-value=1e-23 Score=213.89 Aligned_cols=190 Identities=21% Similarity=0.350 Sum_probs=135.8
Q ss_pred CCCCCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccc
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDF 450 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~Df 450 (614)
+..++..++||||+++|+|.+++.... ....++|..+.+++.++ |+||+++.++.+||+||
T Consensus 104 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 104 CDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp CCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred EcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeec
Confidence 344667899999999999999997643 23469999999988877 99999999999999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCccccc-CchHHHHHHh
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFAD-CLSLHNFCEM 526 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~-~~~l~~~~~~ 526 (614)
|+++........ .......||+.|+| |. ...++.++|||||||++|||+||+.||...... ......|...
T Consensus 184 g~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~ 258 (321)
T 2qkw_B 184 GISKKGTELDQT-----HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258 (321)
T ss_dssp TTCEECSSSSCC-----CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHH
T ss_pred cccccccccccc-----ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhh
Confidence 999875433221 22344679999977 87 678899999999999999999999999764332 2223333322
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
..... .+.....+.. +... ..+....+.+++..|++.+|++|||+.||++.|+.+.+.
T Consensus 259 ~~~~~-------~~~~~~~~~~--~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 259 SHNNG-------QLEQIVDPNL--ADKI---RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HHTTT-------CCCSSSSSSC--TTCS---CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ccccc-------cHHHhcChhh--cccc---CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 11110 0001111100 0001 134556677888999999999999999999999987653
No 106
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=2.5e-25 Score=227.24 Aligned_cols=239 Identities=16% Similarity=0.188 Sum_probs=196.6
Q ss_pred cccCC--CCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCccc-CCcChhhhccccccccEEEccCCcccccCCCC
Q 046036 6 EIGNL--FRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGI-IPPSLDSFTNLSTKLRILDAGGNQFAGDIPAG 82 (614)
Q Consensus 6 ~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~ 82 (614)
.+.++ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|.. +..++ +|++|+|++|.+++..+..
T Consensus 63 ~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~---~~~~~-~L~~L~L~~~~l~~~~~~~ 137 (336)
T 2ast_B 63 VTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGI---LSQCS-KLQNLSLEGLRLSDPIVNT 137 (336)
T ss_dssp HHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHH---HTTBC-CCSEEECTTCBCCHHHHHH
T ss_pred HHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHH---HhhCC-CCCEEeCcCcccCHHHHHH
Confidence 34445 8999999999999987765 56799999999999999865 6655 67787 9999999999999888888
Q ss_pred CcCCCCCCEEeccCC-cCccc-CCccccCCCCCCcccccccccccceEecCCC-ccccc-cchhhhccC-CCCeeecccc
Q 046036 83 IPKYFNLIQLGLDRN-CLAGS-IPFSIGKLQNLQKLNPLATSLYSFQLNLAEN-NLTGN-IPESLENLT-SLQILNLSCN 157 (614)
Q Consensus 83 ~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~L~~N 157 (614)
+..+++|++|+|++| .+++. ++..+..+++|++|+ +++| .+++. ++..+..++ +|++|+|++|
T Consensus 138 l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~------------l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 138 LAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELN------------LSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp HTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEE------------CCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred HhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEc------------CCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 999999999999999 68763 677788899999887 9999 99865 677899999 9999999999
Q ss_pred --cCC-CCCCCCCCCCCCCCEEEcCCCC-CccCCcccccCCCCCceeccCCcc-CCCCccccccCcccchHHhccCcccc
Q 046036 158 --HLG-GSIPKPSGLFSTLSSIDFAHNN-FNGSLPLEVGSLSNTQELDFSEHM-LSDEIPITLGNRSKFEHLLLGGNMFQ 232 (614)
Q Consensus 158 --~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~ 232 (614)
.++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. ++......+..+++|+.|++++| ++
T Consensus 206 ~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~ 284 (336)
T 2ast_B 206 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP 284 (336)
T ss_dssp GGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC
T ss_pred cccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC
Confidence 455 3456667789999999999999 787888899999999999999995 43333336888999999999999 33
Q ss_pred ccCCccccCC-CccceEEccCCcCcccCCcccCC
Q 046036 233 GRIPPFFGSF-KGTIDLNLSHNNLSGTIPKELET 265 (614)
Q Consensus 233 ~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~ 265 (614)
...+..+ ..+..|++++|++++..|..++.
T Consensus 285 ---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 285 ---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp ---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred ---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 2234444 34777778999999888876654
No 107
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=3.3e-23 Score=212.59 Aligned_cols=241 Identities=16% Similarity=0.078 Sum_probs=173.5
Q ss_pred CeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCC-CCCcCCCCCCE-
Q 046036 14 QNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIP-AGIPKYFNLIQ- 91 (614)
Q Consensus 14 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~- 91 (614)
+.++.++++++ .+|..+ .+++++|+|++|+|+.+.+.. |.+++ +|++|+|++|++.+.+| ..|.++++|.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~---f~~l~-~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~ 84 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGA---FSGFG-DLEKIEISQNDVLEVIEADVFSNLPKLHEI 84 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTS---STTCT-TCCEEEEECCTTCCEECTTSBCSCTTCCEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHH---HcCCC-CCCEEECcCCCCCCccChhHhhcchhhhhh
Confidence 56788888888 667666 357888888888888555556 67776 88888888888765555 45778887765
Q ss_pred EeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeeccc-ccCCCCCCCCCCCC
Q 046036 92 LGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSC-NHLGGSIPKPSGLF 170 (614)
Q Consensus 92 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l 170 (614)
+.++.|+++...|..|..+++|++|+ +++|+++...+..+....++..|++.+ |++....+..+..+
T Consensus 85 l~~~~N~l~~l~~~~f~~l~~L~~L~------------l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~ 152 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLPNLQYLL------------ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGL 152 (350)
T ss_dssp EEEEETTCCEECTTSBCCCTTCCEEE------------EEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTS
T ss_pred hcccCCcccccCchhhhhcccccccc------------ccccccccCCchhhcccchhhhhhhccccccccccccchhhc
Confidence 56667888877788888888888777 888888877776777777888888865 56664444555555
Q ss_pred C-CCCEEEcCCCCCccCCcccccCCCCCceeccCC-ccCCCCccccccCcccchHHhccCccccccCCccccCCCccceE
Q 046036 171 S-TLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSE-HMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDL 248 (614)
Q Consensus 171 ~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 248 (614)
. .++.|+|++|.|+. ++.......+|+.|++++ |.++.+.+..|..+++|+.|+|++|+|+...+..|. +|+.|
T Consensus 153 ~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L 228 (350)
T 4ay9_X 153 SFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKL 228 (350)
T ss_dssp BSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEE
T ss_pred chhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cchHh
Confidence 4 57888888888884 444444567788888875 566655556788888899999999988854444444 44555
Q ss_pred EccCCcCcccCCcccCCCCCCCEEECcCCc
Q 046036 249 NLSHNNLSGTIPKELETLPFLENLNLSFNN 278 (614)
Q Consensus 249 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 278 (614)
.+.++.--..+| .+..+++|+.++++++.
T Consensus 229 ~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 229 RARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp ECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred hhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 544443333566 37788889999887654
No 108
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=2.7e-23 Score=213.27 Aligned_cols=245 Identities=16% Similarity=0.117 Sum_probs=192.8
Q ss_pred cEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCC-ccccCCCCCCcc
Q 046036 38 TYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIP-FSIGKLQNLQKL 116 (614)
Q Consensus 38 ~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L 116 (614)
++++-++|+++ .+|..+ ++++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|+++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l------~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~ 84 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL------PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEI 84 (350)
T ss_dssp TEEEEESTTCC-SCCTTC------CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEE
T ss_pred CEEEecCCCCC-ccCcCc------CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhh
Confidence 67889999999 678763 2389999999999996666789999999999999999876665 568888887754
Q ss_pred cccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCC-CCCccCCcccccCCC
Q 046036 117 NPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAH-NNFNGSLPLEVGSLS 195 (614)
Q Consensus 117 ~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~ 195 (614)
. .++.|+|+...|..|..+++|++|++++|++....+..+....++..|++.+ |.+....+..|..+.
T Consensus 85 l-----------~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 85 R-----------IEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp E-----------EEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred h-----------cccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 2 3778999988889999999999999999999976666677777888999866 567766666677764
Q ss_pred -CCceeccCCccCCCCccccccCcccchHHhccC-ccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEE
Q 046036 196 -NTQELDFSEHMLSDEIPITLGNRSKFEHLLLGG-NMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLN 273 (614)
Q Consensus 196 -~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 273 (614)
.++.|+|++|+|+.+.+..| ...+|+.|++++ |.++...++.|..+++|+.|||++|+|+...+.. +.+|+.|.
T Consensus 154 ~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~ 229 (350)
T 4ay9_X 154 FESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LENLKKLR 229 (350)
T ss_dssp SSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEE
T ss_pred hhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hccchHhh
Confidence 68899999999986555444 567899999975 6777555567899999999999999999654444 45666676
Q ss_pred CcCCcCcccCCCccccCCCceEEEecCCCccc
Q 046036 274 LSFNNFEGQLPSMSVFTNTSVISIVGNGKLCG 305 (614)
Q Consensus 274 ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~ 305 (614)
+.++.--..+|....++++..+++. +++.|.
T Consensus 230 ~l~~~~l~~lP~l~~l~~L~~l~l~-~~~~c~ 260 (350)
T 4ay9_X 230 ARSTYNLKKLPTLEKLVALMEASLT-YPSHCC 260 (350)
T ss_dssp CTTCTTCCCCCCTTTCCSCCEEECS-CHHHHH
T ss_pred hccCCCcCcCCCchhCcChhhCcCC-CCcccc
Confidence 6665544567778888999888874 556663
No 109
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.89 E-value=3.9e-23 Score=209.62 Aligned_cols=188 Identities=19% Similarity=0.183 Sum_probs=130.4
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC----------------------------CCceeeCCCCCe
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI----------------------------PSNVLLDYDMTA 445 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i----------------------------~~NILld~~~~~ 445 (614)
...++|||||++|+|.++++.. .++|..+.+++.++ |+|||++.++.+
T Consensus 95 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 95 VDLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp EEEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred ceEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeE
Confidence 3469999999999999999753 48888888777654 899999999999
Q ss_pred eecccccccccCCCCCCCCCCCcCcccccccccccc-cc-c------CCCCccCceeehhHHHHHHHhCCCCCCcccccC
Q 046036 446 YVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-V------ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADC 517 (614)
Q Consensus 446 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~------~~~~~k~DVySfGvvllElltG~~p~~~~~~~~ 517 (614)
||+|||+++........ .......||+.|+| |. . ..++.++|||||||++|||+||+.||.......
T Consensus 171 kL~DFg~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~ 245 (322)
T 3soc_A 171 CIADFGLALKFEAGKSA-----GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEY 245 (322)
T ss_dssp EECCCTTCEEECTTSCC-----CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCC
T ss_pred EEccCCcccccccccCc-----cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchh
Confidence 99999999877654321 22344689999977 87 2 356678999999999999999999997643322
Q ss_pred chHHHHHHh-hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 518 LSLHNFCEM-ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 518 ~~l~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
... +... .......+..+........+.... .+. ...+...+.+++..|++.+|++|||+.||++.|+++++.
T Consensus 246 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 246 MLP--FEEEIGQHPSLEDMQEVVVHKKKRPVLRD--YWQ--KHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CCT--THHHHCSSCCHHHHHHHHTTSCCCCCCCG--GGG--SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccc--hhhhhccCCchhhhhhhhhcccCCCCccc--ccc--ccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111 1111 111122222322222222211111 111 023445577888999999999999999999999998865
No 110
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.88 E-value=2.4e-23 Score=211.56 Aligned_cols=184 Identities=29% Similarity=0.404 Sum_probs=134.7
Q ss_pred CCCCCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC---------------------CCceeeCCCCCeee
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI---------------------PSNVLLDYDMTAYV 447 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i---------------------~~NILld~~~~~kl 447 (614)
+..++..++|||||++|+|.++++... ....++|..+..|+.++ |+|||++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 344667899999999999999998654 33458999888887655 89999999999999
Q ss_pred cccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCccc---ccCchHH
Q 046036 448 GDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMF---ADCLSLH 521 (614)
Q Consensus 448 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~---~~~~~l~ 521 (614)
+|||+++....... .......||++|+| |. ...++.++|||||||+++||+||+.||+... .......
T Consensus 176 ~Dfg~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 249 (326)
T 3uim_A 176 GDFGLAKLMDYKDT------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249 (326)
T ss_dssp CCCSSCEECCSSSS------CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred ccCccccccCcccc------cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence 99999987754332 22344669999977 87 6778999999999999999999999996421 1223344
Q ss_pred HHHHhhCCCC-hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHH
Q 046036 522 NFCEMALPES-VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNV 592 (614)
Q Consensus 522 ~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~ 592 (614)
.|........ .....+..+... . ..+....+.+++..|++.+|++|||+.||+++|+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 250 DWVKGLLKEKKLEALVDVDLQGN----------Y---KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp HHHTTTTSSCCSTTSSCTTCTTS----------C---CHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHHHHHhhchhhhhhcChhhccc----------c---CHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 5554443322 111111111110 1 13456677889999999999999999999999975
No 111
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.88 E-value=5.2e-23 Score=207.21 Aligned_cols=185 Identities=25% Similarity=0.318 Sum_probs=132.4
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++........++|..+.+++.++ |+||++++++.+||+|||+
T Consensus 100 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~ 179 (307)
T 2nru_A 100 SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGL 179 (307)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccc
Confidence 3456789999999999999999754444569999998888877 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC--
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL-- 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~-- 528 (614)
++........ .......||+.|+| |. .+.++.++|||||||+++||+||+.||....... .+..+.....
T Consensus 180 ~~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~ 253 (307)
T 2nru_A 180 ARASEKFAQT-----VMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDE 253 (307)
T ss_dssp CEECCSCSSC-----EECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTTHHHHHHHTT
T ss_pred cccccccccc-----ccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHHHHHHHhhhh
Confidence 9876543221 12334679999977 87 6678999999999999999999999997643221 1112211111
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKE 595 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~ 595 (614)
...+.+.+++.+.. . .......+.+++..|++.+|++|||++||++.|++++.
T Consensus 254 ~~~~~~~~~~~~~~-------~-------~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 254 EKTIEDYIDKKMND-------A-------DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SCCHHHHSCSSCSC-------C-------CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hhhhhhhccccccc-------c-------chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 11122211111100 0 02344556678899999999999999999999998764
No 112
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=5.6e-22 Score=187.65 Aligned_cols=162 Identities=20% Similarity=0.117 Sum_probs=93.8
Q ss_pred cccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhh
Q 046036 64 KLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESL 143 (614)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~ 143 (614)
+|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+ |++|++++..+..|
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~------------Ls~n~l~~~~~~~~ 96 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN------------LSTNQLQSLPNGVF 96 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE------------CCSSCCCCCCTTTT
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE------------CCCCcCCccCHhHh
Confidence 455555555555544444455555555555555555544444455555555554 55555554444455
Q ss_pred hccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchH
Q 046036 144 ENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEH 223 (614)
Q Consensus 144 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 223 (614)
..+++|++|+|++|++++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+.+ .+++|+.
T Consensus 97 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~ 169 (208)
T 2o6s_A 97 DKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRY 169 (208)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHH
T ss_pred cCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHH
Confidence 566666666666666664444445566666666666666665444445666666666666665543 3446677
Q ss_pred HhccCccccccCCccccCCCc
Q 046036 224 LLLGGNMFQGRIPPFFGSFKG 244 (614)
Q Consensus 224 L~L~~N~l~~~~p~~~~~l~~ 244 (614)
|+++.|.++|.+|.+++.++.
T Consensus 170 L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 170 LSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp HHHHHHHCTTTBBCTTSSBCT
T ss_pred HHHHHHhCCceeeccCccccC
Confidence 777777777777776665543
No 113
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=6.7e-22 Score=187.09 Aligned_cols=182 Identities=22% Similarity=0.207 Sum_probs=157.4
Q ss_pred CCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEE
Q 046036 13 LQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQL 92 (614)
Q Consensus 13 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 92 (614)
-+.++.+++.++ .+|..+ .++|++|+|++|++++..+.. |.+++ +|++|+|++|++++..+..|..+++|++|
T Consensus 9 ~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~---~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGV---FDELT-SLTQLYLGGNKLQSLPNGVFNKLTSLTYL 81 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTT---TTTCT-TCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhh---hcccc-cCcEEECCCCccCccChhhcCCCCCcCEE
Confidence 367888999988 556554 458999999999999766666 67777 99999999999997666678999999999
Q ss_pred eccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCC
Q 046036 93 GLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFST 172 (614)
Q Consensus 93 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 172 (614)
+|++|++++..+..|..+++|++|+ |++|++++..+..|..+++|++|+|++|++++..+..+..+++
T Consensus 82 ~Ls~n~l~~~~~~~~~~l~~L~~L~------------L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 82 NLSTNQLQSLPNGVFDKLTQLKELA------------LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEE------------CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred ECCCCcCCccCHhHhcCccCCCEEE------------cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCC
Confidence 9999999977777789999999887 9999999887778999999999999999999777777899999
Q ss_pred CCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCccc
Q 046036 173 LSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSK 220 (614)
Q Consensus 173 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 220 (614)
|++|++++|.+.+ .+++|+.|+++.|+++|.+|..++.++.
T Consensus 150 L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 150 LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 9999999998874 4568999999999999999999887765
No 114
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.88 E-value=2.4e-23 Score=215.39 Aligned_cols=187 Identities=17% Similarity=0.142 Sum_probs=120.0
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
...+..|+|||||+ |+|.+++... ..+++.....|+.++ |+|||++.++.+||+|||+
T Consensus 129 ~~~~~~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 129 GEFKSVYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp TTCCCEEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred ccCCEEEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecce
Confidence 34567899999996 7899999854 368998888888887 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
|+.+...... .....+..+||+.|+| |. ...++.++||||+||+++||+||+.||.+..... .+........
T Consensus 205 a~~~~~~~~~---~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g 280 (398)
T 4b99_A 205 ARGLCTSPAE---HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLG 280 (398)
T ss_dssp CBCC----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHC
T ss_pred eeecccCccc---cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcC
Confidence 9976543211 1123456799999977 87 3457899999999999999999999997632211 1111111111
Q ss_pred --CCC-hH----HHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 --PES-VM----ELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 --~~~-~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+.. .. ......+.......+. .+.......-..+.++...|+..||++|||+.|+++
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPV---PWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCC---CHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCChHHhhhhhhhhhhhhhhcCCCcCCC---CHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 111 00 0111111111111111 111111111123446777999999999999999875
No 115
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.88 E-value=3.2e-23 Score=214.01 Aligned_cols=184 Identities=14% Similarity=0.155 Sum_probs=132.9
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeC--CCCCeeecccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLD--YDMTAYVGDFGLA 453 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld--~~~~~kl~DfGla 453 (614)
...++||||| +|+|.+++... ...++|..+..|+.++ |+|||++ .++.+||+|||++
T Consensus 125 ~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a 201 (364)
T 3op5_A 125 SYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201 (364)
T ss_dssp EEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTC
T ss_pred ceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcc
Confidence 5579999999 99999999753 3469999999998888 9999999 8899999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
+.+..................||+.|+| |. ...++.++|||||||++|||+||+.||...... .....+.......
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-~~~~~~~~~~~~~ 280 (364)
T 3op5_A 202 YRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-PKYVRDSKIRYRE 280 (364)
T ss_dssp EESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-HHHHHHHHHHHHH
T ss_pred eecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-HHHHHHHHHHhhh
Confidence 8776443221111112234669999977 87 567899999999999999999999999853222 2222223322223
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
...+.+++.+... .....+.+++..|++.+|++||++.++++.|+.+....
T Consensus 281 ~~~~~~~~~~~~~----------------~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 281 NIASLMDKCFPAA----------------NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp CHHHHHHHHSCTT----------------CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHhcccc----------------cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 3334443333110 01223446777999999999999999999999887764
No 116
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.87 E-value=5e-23 Score=207.24 Aligned_cols=177 Identities=20% Similarity=0.292 Sum_probs=122.4
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
.+..++||||+++|+|.++++.. ...+++..+..|+.++ |+|||+++++.+||+|||+++
T Consensus 103 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~ 180 (307)
T 3lb7_A 103 KDNLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT 180 (307)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSC
T ss_pred cCcEEEEEecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCce
Confidence 45678999999999999999753 3468998888888777 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc-----cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-----VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-----~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
........ .......||+.|+| |. ...++.++|||||||+++||+||+.||........ +...+.
T Consensus 181 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~--- 251 (307)
T 3lb7_A 181 VKSRWSGS-----QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVG--- 251 (307)
T ss_dssp C-----------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHH---
T ss_pred eccccccc-----ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHHh---
Confidence 65432211 22334679999977 76 34678899999999999999999999975322111 111010
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhh
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLL 598 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~ 598 (614)
.....+..... ...+...+.+++..|++.+|++||++.||++.|+.++..+.
T Consensus 252 ------------~~~~~~~~~~~------~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 252 ------------RGYASPDLSKL------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp ------------HTCCCCCSTTS------CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred ------------cCCCCcchhhh------hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 11010000000 00112234567789999999999999999999998876653
No 117
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.87 E-value=3.5e-23 Score=223.50 Aligned_cols=112 Identities=25% Similarity=0.355 Sum_probs=95.2
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccc
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfG 451 (614)
+..++..|+|||||++|+|.++|... ..+++.....++.+| |+|||||.++++||+|||
T Consensus 261 f~~~~~lylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFG 337 (689)
T 3v5w_A 261 FHTPDKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG 337 (689)
T ss_dssp EECSSEEEEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEECCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccc
Confidence 34577899999999999999999753 358888887777777 999999999999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
+|+.+.... ....+||+.||| |+ . ..|+.++||||+||++|||+||+.||.+.
T Consensus 338 lA~~~~~~~---------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~ 394 (689)
T 3v5w_A 338 LACDFSKKK---------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394 (689)
T ss_dssp TCEECSSCC---------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred eeeecCCCC---------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 998775432 334789999988 87 2 46899999999999999999999999753
No 118
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.87 E-value=1.8e-22 Score=208.61 Aligned_cols=177 Identities=19% Similarity=0.291 Sum_probs=129.1
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCC-------------CcccCHHHHHHHHhhC------------------CCcee
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEA-------------TRRLDLAEGLKIAVDI------------------PSNVL 438 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~~i------------------~~NIL 438 (614)
+..++..++||||+++|+|.+++..... ...++|..+.+++.++ |+|||
T Consensus 156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl 235 (370)
T 2psq_A 156 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL 235 (370)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred EccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEE
Confidence 3456678999999999999999975431 2358898888888777 99999
Q ss_pred eCCCCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCccc
Q 046036 439 LDYDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMF 514 (614)
Q Consensus 439 ld~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~ 514 (614)
++.++.+||+|||+++........ .......||+.|+| |. ...++.++|||||||++|||+| |+.||....
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~ 310 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTT-----CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ECCCCCEEEccccCCcccCcccce-----ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999999999999876543321 22344668899977 87 6778999999999999999999 999997532
Q ss_pred ccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhH
Q 046036 515 ADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIK 594 (614)
Q Consensus 515 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~ 594 (614)
.. .+ .. .+......... . .+...+.+++..|++.+|++||++.|+++.|+.+.
T Consensus 311 ~~--~~---------------~~-~~~~~~~~~~~--~-------~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 311 VE--EL---------------FK-LLKEGHRMDKP--A-------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp GG--GH---------------HH-HHHTTCCCCCC--T-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HH--HH---------------HH-HHhcCCCCCCC--C-------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 21 11 11 11111110000 0 11123446777999999999999999999999987
Q ss_pred HHhh
Q 046036 595 EVLL 598 (614)
Q Consensus 595 ~~~~ 598 (614)
....
T Consensus 364 ~~~~ 367 (370)
T 2psq_A 364 TLTT 367 (370)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 6543
No 119
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.87 E-value=1.8e-22 Score=203.42 Aligned_cols=173 Identities=22% Similarity=0.269 Sum_probs=115.6
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------CCceeeCCCCCeeeccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------PSNVLLDYDMTAYVGDF 450 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------~~NILld~~~~~kl~Df 450 (614)
...+..++||||+++|+|.+++........+++..+..++.++ |+||+++.++.+||+||
T Consensus 104 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp CSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred EECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCC
Confidence 3456689999999999999999865433458888888877665 89999999999999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
|+++...... .......||+.|+| |. ...++.++|||||||++|||+||+.||......
T Consensus 184 g~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~----------- 245 (309)
T 3p86_A 184 GLSRLKASTF-------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA----------- 245 (309)
T ss_dssp C------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-----------
T ss_pred CCCccccccc-------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----------
Confidence 9998654332 12345689999977 87 667899999999999999999999999753211
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
+............... ... -..+.++...|++.+|++|||++|+++.|+.+...
T Consensus 246 ------~~~~~~~~~~~~~~~~--~~~-------~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 246 ------QVVAAVGFKCKRLEIP--RNL-------NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp ------HHHHHHHHSCCCCCCC--TTS-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred ------HHHHHHHhcCCCCCCC--ccC-------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1111111111100000 011 11344677799999999999999999999877644
No 120
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.87 E-value=1.4e-22 Score=207.33 Aligned_cols=117 Identities=21% Similarity=0.319 Sum_probs=89.2
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCC-CCeeecccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYD-MTAYVGDFG 451 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~-~~~kl~DfG 451 (614)
..++..++|||||++|+|.+++. .+++.+...++.++ |+|||++.+ +.+||+|||
T Consensus 90 ~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 90 RKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp EETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 34677899999999999999995 37777777777777 999999977 799999999
Q ss_pred cccccCCCCCCCC---------------------CCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhC
Q 046036 452 LARFLPTNVTNPM---------------------KGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTG 506 (614)
Q Consensus 452 la~~~~~~~~~~~---------------------~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG 506 (614)
+|+.......... ......+..+||++|+| |. . ..++.++||||+||+++||+||
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 9986643321000 00112334689999977 87 3 3589999999999999999999
Q ss_pred CCCCCcc
Q 046036 507 KRPTDEM 513 (614)
Q Consensus 507 ~~p~~~~ 513 (614)
+.||...
T Consensus 244 ~~Pf~~~ 250 (361)
T 4f9c_A 244 RYPFYKA 250 (361)
T ss_dssp CSSSSCC
T ss_pred CCCCCCC
Confidence 9999653
No 121
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.86 E-value=3.7e-22 Score=216.73 Aligned_cols=164 Identities=16% Similarity=0.193 Sum_probs=120.7
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCC--CCeeeccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYD--MTAYVGDF 450 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~--~~~kl~Df 450 (614)
..++..++|||||++|+|.++|... ...+++.....++.|+ |+|||++.+ +.+||+||
T Consensus 224 ~~~~~~~iv~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DF 301 (573)
T 3uto_A 224 EDDNEMVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDF 301 (573)
T ss_dssp ECSSEEEEEEECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred EECCEEEEEEeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeec
Confidence 4567889999999999999999753 2358888888887776 999999854 89999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
|+|+.+.... .....+||+.||| |. ...++.++||||+||++|||++|+.||.+...
T Consensus 302 G~a~~~~~~~--------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~------------ 361 (573)
T 3uto_A 302 GLTAHLDPKQ--------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND------------ 361 (573)
T ss_dssp SSCEECCTTS--------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------------
T ss_pred cceeEccCCC--------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------------
Confidence 9999876542 2445789999987 87 67789999999999999999999999975321
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+.................+.. .+.++...|++.||++|||+.|+++
T Consensus 362 -----~~~~~~i~~~~~~~~~~~~~~~s~-------~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 362 -----DETLRNVKSCDWNMDDSAFSGISE-------DGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp -----HHHHHHHHTTCCCCCSGGGTTSCH-------HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -----HHHHHHHHhCCCCCCcccccCCCH-------HHHHHHHHHccCChhHCcCHHHHhc
Confidence 122222222222211111111221 2335667999999999999999976
No 122
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.86 E-value=1.6e-22 Score=202.92 Aligned_cols=177 Identities=19% Similarity=0.233 Sum_probs=121.8
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------------CCceeeCCCCCee
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------------PSNVLLDYDMTAY 446 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------------~~NILld~~~~~k 446 (614)
....++||||+++|+|.++++.. .++|..+.+++.++ |+|||++.++.+|
T Consensus 78 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 78 STQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred CceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEE
Confidence 45578999999999999999643 48888877776554 8999999999999
Q ss_pred ecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cC------CCCccCceeehhHHHHHHHhC----------C
Q 046036 447 VGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VA------RYQHKGKGYSCGILLLEIMTG----------K 507 (614)
Q Consensus 447 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~------~~~~k~DVySfGvvllElltG----------~ 507 (614)
|+|||+++........ .........||+.|+| |. .. .++.++|||||||++|||+|| +
T Consensus 154 l~Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~ 230 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQ---LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230 (301)
T ss_dssp ECCCTTCEEEETTTTE---EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred EeeCCCeeeccccccc---ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence 9999999876543221 0011233579999977 87 22 455799999999999999999 7
Q ss_pred CCCCcccccCchHHHHHHhhCCCChHHHHHHHHhc-CcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHH
Q 046036 508 RPTDEMFADCLSLHNFCEMALPESVMELVYSRLLQ-GVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREM 586 (614)
Q Consensus 508 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev 586 (614)
.||......... .+.+...+.. ...+.... .... ......+.+++..|++.+|++|||+.||
T Consensus 231 ~pf~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~~i 293 (301)
T 3q4u_A 231 PPFYDVVPNDPS-------------FEDMRKVVCVDQQRPNIPN-RWFS---DPTLTSLAKLMKECWYQNPSARLTALRI 293 (301)
T ss_dssp CTTTTTSCSSCC-------------HHHHHHHHTTSCCCCCCCG-GGGG---SHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ccccccCCCCcc-------------hhhhhHHHhccCCCCCCCh-hhcc---CccHHHHHHHHHHHhhcChhhCCCHHHH
Confidence 777543322211 1112222111 11111110 0011 1344566688899999999999999999
Q ss_pred HHHHHHh
Q 046036 587 VMEMNVI 593 (614)
Q Consensus 587 ~~~L~~i 593 (614)
++.|+++
T Consensus 294 ~~~L~~i 300 (301)
T 3q4u_A 294 KKTLTKI 300 (301)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 9999876
No 123
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.86 E-value=1.6e-22 Score=209.68 Aligned_cols=172 Identities=19% Similarity=0.268 Sum_probs=124.9
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++|||||++|+|.++++.. ...+++..+.+++.++ |+|||++.++.+||+|||+
T Consensus 182 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 182 TQKQPIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred ecCCCcEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 3456789999999999999999753 3358888888888777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++........ .......+++.|+| |. ...++.++|||||||++|||+| |+.||......
T Consensus 260 s~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~------------ 322 (377)
T 3cbl_A 260 SREEADGVYA-----ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ------------ 322 (377)
T ss_dssp CEECTTSEEE-----CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH------------
T ss_pred ceecCCCcee-----ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------------
Confidence 9865432110 11122346778977 87 6778999999999999999999 99999753211
Q ss_pred CCChHHHHHHHHhcCcC-CCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 529 PESVMELVYSRLLQGVD-KDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
+. ...+..... +.|. .+...+.+++..||+.+|++|||++++++.|+.++...
T Consensus 323 -----~~-~~~~~~~~~~~~~~----------~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 323 -----QT-REFVEKGGRLPCPE----------LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp -----HH-HHHHHTTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----HH-HHHHHcCCCCCCCC----------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 11 111111111 1111 11123446778999999999999999999999998654
No 124
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.3e-21 Score=211.31 Aligned_cols=37 Identities=19% Similarity=0.263 Sum_probs=18.8
Q ss_pred ceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccC
Q 046036 246 IDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQL 283 (614)
Q Consensus 246 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 283 (614)
+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+
T Consensus 210 ~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~ 246 (571)
T 3cvr_A 210 IFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRI 246 (571)
T ss_dssp EEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHH
T ss_pred eEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcC
Confidence 55555555555 34444444555555555555555443
No 125
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.86 E-value=3.2e-22 Score=206.93 Aligned_cols=174 Identities=21% Similarity=0.339 Sum_probs=115.3
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++|||||++|+|.++++.. ...++|..+..++.++ |+|||++.++.+||+|||+
T Consensus 116 ~~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 193 (373)
T 2qol_A 116 TKSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193 (373)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--
T ss_pred eeCCceEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcc
Confidence 3456789999999999999999754 3458999998888877 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++........ ........+++.|+| |. ...++.++|||||||++||+++ |+.||......
T Consensus 194 a~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~------------ 257 (373)
T 2qol_A 194 GRVLEDDPEA----AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ------------ 257 (373)
T ss_dssp ------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH------------
T ss_pred ccccccCCcc----ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------------
Confidence 9877543221 011223346778977 87 6788999999999999999998 99999753211
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
+... .+.......+. .++...+.+++..|++.+|++||+|.||++.|+.+....
T Consensus 258 -----~~~~-~i~~~~~~~~~---------~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 258 -----DVIK-AVDEGYRLPPP---------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -----HHHH-HHHTTEECCCC---------TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -----HHHH-HHHcCCCCCCC---------ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 1111 11111111000 012234557788999999999999999999999887643
No 126
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.86 E-value=7e-22 Score=205.31 Aligned_cols=179 Identities=22% Similarity=0.291 Sum_probs=131.6
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCC-------------CcccCHHHHHHHHhhC------------------CCcee
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEA-------------TRRLDLAEGLKIAVDI------------------PSNVL 438 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~~i------------------~~NIL 438 (614)
+..++..++||||+++|+|.+++..... ...+++..+.+|+.++ |+|||
T Consensus 144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 223 (382)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEE
Confidence 3446678999999999999999975431 2358999999988887 99999
Q ss_pred eCCCCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCccc
Q 046036 439 LDYDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMF 514 (614)
Q Consensus 439 ld~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~ 514 (614)
+++++.+||+|||+++........ .......||++|+| |. ...++.++|||||||+++||+| |+.||....
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~ 298 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTT-----CCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred EcCCCcEEEcccCccccccccccc-----ccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999876543321 22344678899977 87 6778999999999999999999 999987532
Q ss_pred ccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhH
Q 046036 515 ADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIK 594 (614)
Q Consensus 515 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~ 594 (614)
. .+.. ..+.......... .....+.+++..|++.+|++|||++||++.|+++.
T Consensus 299 ~-----------------~~~~-~~~~~~~~~~~~~---------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 299 V-----------------EELF-KLLKEGHRMDKPS---------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp H-----------------HHHH-HHHHTTCCCCCCS---------SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H-----------------HHHH-HHHHcCCCCCCCc---------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 1111 1111111111110 11123456778999999999999999999999998
Q ss_pred HHhhcc
Q 046036 595 EVLLGV 600 (614)
Q Consensus 595 ~~~~~~ 600 (614)
......
T Consensus 352 ~~~~~~ 357 (382)
T 3tt0_A 352 ALTSNQ 357 (382)
T ss_dssp HHSCSC
T ss_pred HHHhcC
Confidence 765444
No 127
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.86 E-value=2.4e-22 Score=205.06 Aligned_cols=206 Identities=18% Similarity=0.135 Sum_probs=127.4
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC---------------------------CCceeeCCCCC
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI---------------------------PSNVLLDYDMT 444 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i---------------------------~~NILld~~~~ 444 (614)
+....++|||||++|+|.+++... ..+|..+.+++.++ |+|||++.++.
T Consensus 83 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 158 (336)
T 3g2f_A 83 GRMEYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT 158 (336)
T ss_dssp SCEEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSC
T ss_pred CCceEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCc
Confidence 345678999999999999999754 24777776665543 89999999999
Q ss_pred eeecccccccccCCCCCCCC-CCCcCcccccccccccc-cc-c--------CCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 445 AYVGDFGLARFLPTNVTNPM-KGQSNSAAVWGSIGYNM-EW-V--------ARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 445 ~kl~DfGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~a-E~-~--------~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
+||+|||+++.+........ ..........||+.|+| |. . ..++.++|||||||++|||+||+.|+...
T Consensus 159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 99999999987654321100 00112334679999977 87 2 35668899999999999999998876442
Q ss_pred cccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHh
Q 046036 514 FADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVI 593 (614)
Q Consensus 514 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i 593 (614)
.........+..........+.....+..... .+.....+. ........+.+++..|++.+|++|||+.||++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ-RPKFPEAWK-ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp SCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCC-CCCCCTTCC-CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhHHHHhhhcccCCCchHHHHHhhhccccc-CCCCCcccc-cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 22111111111111111111222222211110 010000000 0012344566788899999999999999999999999
Q ss_pred HHHhhccccc
Q 046036 594 KEVLLGVRIN 603 (614)
Q Consensus 594 ~~~~~~~~~~ 603 (614)
...+.+.+.+
T Consensus 317 l~~~~~~~~~ 326 (336)
T 3g2f_A 317 MMIWERNKSV 326 (336)
T ss_dssp HHCCCC----
T ss_pred HHHHHhcccC
Confidence 9887776543
No 128
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.86 E-value=4.1e-22 Score=202.31 Aligned_cols=173 Identities=18% Similarity=0.305 Sum_probs=124.1
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.++++.. ...+++..+..++.++ |+|||++.++.+||+|||+
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 197 (325)
T 3kul_A 120 TRGRLAMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGL 197 (325)
T ss_dssp CGGGCCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSS
T ss_pred EeCCccEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCc
Confidence 3456789999999999999999753 2358999998888877 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++........ ........||+.|+| |. ...++.++|||||||++|||++ |+.||.....
T Consensus 198 a~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~------------- 260 (325)
T 3kul_A 198 SRVLEDDPDA----AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN------------- 260 (325)
T ss_dssp CEECC----C----CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH-------------
T ss_pred ccccccCccc----eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH-------------
Confidence 9877654321 112234567888977 87 5788999999999999999999 9999975321
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
.+...........+.+. .....+.+++..|++.+|++|||+.||++.|+.+...
T Consensus 261 ----~~~~~~~~~~~~~~~~~----------~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 261 ----RDVISSVEEGYRLPAPM----------GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp ----HHHHHHHHTTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ----HHHHHHHHcCCCCCCCC----------CcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 11111111111111111 1122345677899999999999999999999988754
No 129
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.86 E-value=3.9e-22 Score=205.55 Aligned_cols=173 Identities=20% Similarity=0.255 Sum_probs=125.4
Q ss_pred CCceeEEecccCCCchhhhccCCCC-------------------------------------------------------
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEA------------------------------------------------------- 417 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~------------------------------------------------------- 417 (614)
++..++|||||++|+|.++++....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 4458999999999999999976431
Q ss_pred --------CcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccccCCCCCCCCCCCcCcc
Q 046036 418 --------TRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARFLPTNVTNPMKGQSNSA 471 (614)
Q Consensus 418 --------~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~ 471 (614)
...+++..+..++.++ |+|||++.++.+||+|||+++........ ....
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-----~~~~ 253 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY-----VRKG 253 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC-----EEC-
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc-----hhcc
Confidence 1128888888888777 99999999999999999999876543321 2334
Q ss_pred cccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCCChHHHHHHHHhcCcC-C
Q 046036 472 AVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPESVMELVYSRLLQGVD-K 546 (614)
Q Consensus 472 ~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~-~ 546 (614)
...||+.|+| |. ...++.++|||||||+++||+| |+.||....... .+...+..... .
T Consensus 254 ~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----------------~~~~~~~~~~~~~ 316 (359)
T 3vhe_A 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----------------EFCRRLKEGTRMR 316 (359)
T ss_dssp -CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-----------------HHHHHHHHTCCCC
T ss_pred ccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-----------------HHHHHHHcCCCCC
Confidence 5678999977 87 6788999999999999999999 999997532211 11111111111 1
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 547 DAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
.+.. ....+.+++..|++.+|++||||.||++.|+++.+..
T Consensus 317 ~~~~----------~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 317 APDY----------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp CCTT----------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCC----------CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 1110 1123446777999999999999999999999887653
No 130
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.86 E-value=2.4e-22 Score=201.19 Aligned_cols=186 Identities=19% Similarity=0.286 Sum_probs=122.9
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
...++||||+++|+|.+++... ...+++..+.+++.++ |+||+++.++.+||+|||+++.
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred CceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 3478999999999999999764 2358998888888777 9999999999999999999987
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCCC-
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPES- 531 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~~- 531 (614)
....... ........|++.|+| |. ...++.++|||||||+++||+||..|+...... ............
T Consensus 164 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~ 236 (295)
T 3ugc_A 164 LPQDKEF----FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQM 236 (295)
T ss_dssp ----------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHH
T ss_pred ccCCcce----eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccch
Confidence 7544221 112233557788977 87 677899999999999999999999998643211 111111000000
Q ss_pred hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 532 VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
....+...+......... . .+...+.+++..|++.+|++|||+.|++++|+++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~--~-------~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 237 IVFHLIELLKNNGRLPRP--D-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHHHHHTTCCCCCC--T-------TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHhccCcCCCC--c-------CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 111122222222111111 0 11234556778999999999999999999999998754
No 131
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2e-21 Score=209.85 Aligned_cols=189 Identities=25% Similarity=0.327 Sum_probs=160.3
Q ss_pred CCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCc
Q 046036 36 KLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQK 115 (614)
Q Consensus 36 ~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 115 (614)
+|+.|+|++|+|++ +|..+ + + +|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~---~-~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~ 124 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--P---P-QITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKH 124 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--C---T-TCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCE
T ss_pred CccEEEeCCCCCCc-cCHhH--c---C-CCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCE
Confidence 89999999999996 77763 1 4 8999999999998 677 457899999999999996 776 665 7776
Q ss_pred ccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCC
Q 046036 116 LNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLS 195 (614)
Q Consensus 116 L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 195 (614)
|+ |++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. |. +
T Consensus 125 L~------------Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~ 180 (571)
T 3cvr_A 125 LD------------VDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--E 180 (571)
T ss_dssp EE------------CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--T
T ss_pred EE------------CCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--C
Confidence 66 99999997 555 68999999999999995 665 67899999999999996 676 66 8
Q ss_pred CCceeccCCccCCCCccccccCcccc-------hHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCC
Q 046036 196 NTQELDFSEHMLSDEIPITLGNRSKF-------EHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPF 268 (614)
Q Consensus 196 ~L~~L~ls~N~l~~~~~~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 268 (614)
+|+.|+|++|.|+ .+|. |.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|++++.+|..+..++.
T Consensus 181 ~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 181 SLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp TCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred CCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 9999999999999 4555 654 77 99999999999 68888888999999999999999999988766543
No 132
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.86 E-value=1.1e-21 Score=197.91 Aligned_cols=182 Identities=19% Similarity=0.255 Sum_probs=128.6
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... ...++|..+..++.++ |+||+++.++.+||+|||++
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 155 (310)
T 3s95_A 78 KDKRLNFITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLA 155 (310)
T ss_dssp ETTEEEEEEECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred cCCeeEEEEEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccc
Confidence 356789999999999999999863 3358999999888887 99999999999999999999
Q ss_pred cccCCCCCCCC-------CCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHH
Q 046036 454 RFLPTNVTNPM-------KGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNF 523 (614)
Q Consensus 454 ~~~~~~~~~~~-------~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~ 523 (614)
+.......... ..........||+.|+| |. ...++.++|||||||++|||++|..|+..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~--- 232 (310)
T 3s95_A 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF--- 232 (310)
T ss_dssp EECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS---
T ss_pred eecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH---
Confidence 87654332100 00011124689999977 87 6678999999999999999999999987543321110
Q ss_pred HHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhcc
Q 046036 524 CEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLGV 600 (614)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~~ 600 (614)
........+....... ...+.+++..|++.+|++|||+.|+++.|+.++....+.
T Consensus 233 -----~~~~~~~~~~~~~~~~-----------------~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~~ 287 (310)
T 3s95_A 233 -----GLNVRGFLDRYCPPNC-----------------PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGH 287 (310)
T ss_dssp -----SBCHHHHHHHTCCTTC-----------------CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHC
T ss_pred -----hhhhhccccccCCCCC-----------------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccCc
Confidence 0011111111111111 112345777999999999999999999999999876554
No 133
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.85 E-value=6.6e-22 Score=198.17 Aligned_cols=184 Identities=14% Similarity=0.130 Sum_probs=128.5
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCC-----eeec
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMT-----AYVG 448 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~-----~kl~ 448 (614)
.+...++||||+ +|+|.+++... ...+++..+.+++.++ |+||+++.++. +||+
T Consensus 77 ~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~ 153 (298)
T 1csn_A 77 EGLHNVLVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVV 153 (298)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred CCceeEEEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEE
Confidence 456789999999 99999999854 2358999999988888 99999988776 9999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
|||+++....................||+.|+| |. ...++.++|||||||+++||+||+.||......... ..+
T Consensus 154 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~-~~~-- 230 (298)
T 1csn_A 154 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK-QKY-- 230 (298)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH-HHH--
T ss_pred ECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH-HHH--
Confidence 999998776543221111122345789999977 87 667899999999999999999999999764221110 000
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhh
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLL 598 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~ 598 (614)
..+......... ..........+.+++..|++.+|++||++.+|++.|+++.....
T Consensus 231 -------~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 231 -------ERIGEKKQSTPL----------RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp -------HHHHHHHHHSCH----------HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred -------HHHHhhccCccH----------HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 000000000000 00000112344567789999999999999999999999877654
No 134
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.85 E-value=4.8e-22 Score=203.61 Aligned_cols=182 Identities=14% Similarity=0.202 Sum_probs=125.8
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCC--Ceeeccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDM--TAYVGDFGL 452 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~--~~kl~DfGl 452 (614)
+...++||||+ +|+|.+++...+ .+++..+.+++.++ |+|||++.++ .+||+|||+
T Consensus 124 ~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~ 199 (345)
T 2v62_A 124 RSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGL 199 (345)
T ss_dssp CEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTT
T ss_pred CcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCC
Confidence 56789999999 999999998542 68999999988887 9999999887 999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++.+..................||+.|+| |. ...++.++|||||||++|||+||+.||............ ......
T Consensus 200 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~-~~~~~~ 278 (345)
T 2v62_A 200 SYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT-AKTNLL 278 (345)
T ss_dssp CEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH-HHHHHH
T ss_pred ceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH-HHHhhc
Confidence 98775432211111112245689999977 87 667899999999999999999999999653222111111 111110
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKE 595 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~ 595 (614)
....+.+...... ......+.++...|++.+|++||++.+|++.|+++.-
T Consensus 279 ~~~~~~~~~~~~~----------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 279 DELPQSVLKWAPS----------------GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HTTTHHHHHHSCT----------------TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred ccccHHHHhhccc----------------cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111111111100 0112234567779999999999999999999987543
No 135
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.85 E-value=1.4e-21 Score=195.57 Aligned_cols=184 Identities=15% Similarity=0.152 Sum_probs=129.0
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceee---CCCCCeeeccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLL---DYDMTAYVGDF 450 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILl---d~~~~~kl~Df 450 (614)
.++..++||||+ +|+|.+++... ...+++..+..++.++ |+|||+ ++++.+||+||
T Consensus 76 ~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Df 152 (296)
T 4hgt_A 76 EGDYNVMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCC
T ss_pred CCCceEEEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecC
Confidence 456679999999 99999999743 2358999999888887 999999 78899999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
|+++....................||+.|+| |. ...++.++|||||||+++||+||+.||.........
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------- 224 (296)
T 4hgt_A 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-------- 224 (296)
T ss_dssp TTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS--------
T ss_pred ccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh--------
Confidence 9998776543321111122345789999977 87 667899999999999999999999999764322110
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhh
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLL 598 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~ 598 (614)
..........+..... . ........+.+++..|++.+|++|||+.||++.|+++.....
T Consensus 225 --~~~~~~~~~~~~~~~~-------~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 225 --QKYERISEKKMSTPIE-------V---LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp --SHHHHHHHHHHHSCHH-------H---HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred --hhhhhhhcccccchhh-------h---hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0011111111111000 0 000011245567789999999999999999999998877653
No 136
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.85 E-value=1.5e-21 Score=198.77 Aligned_cols=189 Identities=19% Similarity=0.313 Sum_probs=121.5
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
...+..++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 116 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 193 (333)
T 1mqb_A 116 SKYKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGL 193 (333)
T ss_dssp CSSSSEEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred ecCCCcEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCc
Confidence 3456789999999999999999753 2358898888888877 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++........ ........||+.|+| |. ...++.++|||||||+++||+| |+.||.....
T Consensus 194 ~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------------- 256 (333)
T 1mqb_A 194 SRVLEDDPEA----TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN------------- 256 (333)
T ss_dssp ---------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------------
T ss_pred chhhcccccc----ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-------------
Confidence 9876543221 011223456888977 87 6788999999999999999999 9999965321
Q ss_pred CCChHHHHHHHHhcCcC-CCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhcc----ccc
Q 046036 529 PESVMELVYSRLLQGVD-KDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLGV----RIN 603 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~~----~~~ 603 (614)
.+... .+..... +.+. .....+.+++..|++.+|++||++.|+++.|+++....... .+.
T Consensus 257 ----~~~~~-~~~~~~~~~~~~----------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~~~~~~~~ 321 (333)
T 1mqb_A 257 ----HEVMK-AINDGFRLPTPM----------DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFD 321 (333)
T ss_dssp ----HHHHH-HHHTTCCCCCCT----------TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGGSBCCC-
T ss_pred ----HHHHH-HHHCCCcCCCcc----------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhhhhcCCC
Confidence 11111 1111111 1111 11223456778999999999999999999999887654433 345
Q ss_pred CccccccccC
Q 046036 604 GERRIRKNAT 613 (614)
Q Consensus 604 ~~~~~~~~~~ 613 (614)
|..+.+.+.+
T Consensus 322 p~~~~~~p~~ 331 (333)
T 1mqb_A 322 PRVSIRLPST 331 (333)
T ss_dssp ----------
T ss_pred ccchhhCCCC
Confidence 5555555544
No 137
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.85 E-value=1.4e-21 Score=199.34 Aligned_cols=180 Identities=19% Similarity=0.264 Sum_probs=120.5
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------------CCceeeCCCCCeee
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------------PSNVLLDYDMTAYV 447 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------------~~NILld~~~~~kl 447 (614)
...++||||+++|+|.++++.. .+++..+.+++.++ |+|||++.++.+||
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred CceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 5679999999999999999743 47888777766543 89999999999999
Q ss_pred cccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCc------cCceeehhHHHHHHHhCC----------C
Q 046036 448 GDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQH------KGKGYSCGILLLEIMTGK----------R 508 (614)
Q Consensus 448 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~------k~DVySfGvvllElltG~----------~ 508 (614)
+|||+++......... ........||+.|+| |. ....+. ++|||||||++|||+||. .
T Consensus 184 ~Dfg~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEV---DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp CCCTTCEECC------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EeCCCceeeccccccc---cCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 9999998765432210 011224679999977 87 333333 389999999999999994 4
Q ss_pred CCCcccccCchHHHHHHhhCCCChHHHHHHHH-hcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHH
Q 046036 509 PTDEMFADCLSLHNFCEMALPESVMELVYSRL-LQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMV 587 (614)
Q Consensus 509 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~ 587 (614)
||........ ..+.....+ .....+....+.. ..++...+.+++..|++.+|++|||+.||+
T Consensus 261 p~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~ell 323 (337)
T 3mdy_A 261 PYHDLVPSDP-------------SYEDMREIVCIKKLRPSFPNRWS----SDECLRQMGKLMTECWAHNPASRLTALRVK 323 (337)
T ss_dssp TTTTTSCSSC-------------CHHHHHHHHTTSCCCCCCCGGGG----GSHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred cHhhhcCCCC-------------chhhhHHHHhhhccCccccccch----hhHHHHHHHHHHHHhhhhChhhCCCHHHHH
Confidence 4443221111 112222222 1111111111110 124555677888999999999999999999
Q ss_pred HHHHHhHHHh
Q 046036 588 MEMNVIKEVL 597 (614)
Q Consensus 588 ~~L~~i~~~~ 597 (614)
+.|+.+.+..
T Consensus 324 ~~L~~l~~~~ 333 (337)
T 3mdy_A 324 KTLAKMSESQ 333 (337)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhhc
Confidence 9999987654
No 138
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.85 E-value=7e-22 Score=200.81 Aligned_cols=168 Identities=23% Similarity=0.315 Sum_probs=122.9
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
+..++||||+++|+|.+++... ...+++..+..++.++ |+|||++.++.+||+|||+++.
T Consensus 89 ~~~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 89 STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SSEEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred CCeEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 3478999999999999999864 2358898888888777 9999999999999999999998
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCCC
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
....... .......||++|+| |+ ...++.++|||||||++|||+| |+.||...... .+..
T Consensus 167 ~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~--------- 230 (327)
T 3poz_A 167 LGAEEKE-----YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISS--------- 230 (327)
T ss_dssp HTTTCC------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH---------
T ss_pred ccCCccc-----ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHH---------
Confidence 7654321 22334567889977 87 6788999999999999999999 99999753221 1111
Q ss_pred hHHHHHHHHhcCc-CCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 532 VMELVYSRLLQGV-DKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 532 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
.+.... ...+. .+...+.+++..|++.+|++||+|+|+++.|+.+...
T Consensus 231 -------~~~~~~~~~~~~----------~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 231 -------ILEKGERLPQPP----------ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -------HHHTTCCCCCCT----------TBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -------HHHcCCCCCCCc----------cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 111111 01111 1122355678899999999999999999999988643
No 139
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.85 E-value=1.6e-21 Score=195.35 Aligned_cols=161 Identities=17% Similarity=0.230 Sum_probs=117.6
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... .+++.....++.++ |+|||++.++.+||+|||++
T Consensus 88 ~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 88 VGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp ETTEEEEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred ECCEEEEEEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 356789999999999999999753 47888888887777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
+....... ......||+.|+| |. ...++.++|||||||++|||+||+.||......
T Consensus 164 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-------------- 222 (297)
T 3fxz_A 164 AQITPEQS-------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------------- 222 (297)
T ss_dssp EECCSTTC-------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------------
T ss_pred eecCCccc-------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------------
Confidence 87655432 2345689999977 87 677899999999999999999999999753211
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+.......... +........ ...+.++...|++.+|++|||++|+++
T Consensus 223 ---~~~~~~~~~~~-~~~~~~~~~-------~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 223 ---RALYLIATNGT-PELQNPEKL-------SAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp ---HHHHHHHHHCS-CCCSCGGGS-------CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---HHHHHHHhCCC-CCCCCcccc-------CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11111111110 000011111 122345677999999999999999985
No 140
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.85 E-value=1.9e-21 Score=194.61 Aligned_cols=183 Identities=15% Similarity=0.146 Sum_probs=128.0
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceee---CCCCCeeeccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLL---DYDMTAYVGDF 450 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILl---d~~~~~kl~Df 450 (614)
.++..++||||+ +|+|.+++... ...+++..+..++.++ |+||++ +.++.+||+||
T Consensus 76 ~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 76 EGDYNVMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred CCCceEEEEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 355679999999 89999999743 2358999998888887 999999 48899999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCc-hHHHHHHh
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCL-SLHNFCEM 526 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~-~l~~~~~~ 526 (614)
|+++....................||+.|+| |. ...++.++|||||||+++||+||+.||........ ..
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~------ 226 (296)
T 3uzp_A 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK------ 226 (296)
T ss_dssp TTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH------
T ss_pred CCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhh------
Confidence 9998776543321111112345689999977 87 66789999999999999999999999976432111 10
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhh
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLL 598 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~ 598 (614)
...+....+..... . ........+.+++..|++.+|++|||+.||++.|+++.....
T Consensus 227 -----~~~~~~~~~~~~~~-------~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 227 -----YERISEKKMSTPIE-------V---LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -----HHHHHHHHHHSCHH-------H---HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred -----hhhhcccccCCchH-------H---HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 11111111111000 0 000111234567789999999999999999999998876654
No 141
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.84 E-value=1.4e-21 Score=200.17 Aligned_cols=176 Identities=20% Similarity=0.202 Sum_probs=125.5
Q ss_pred CCCCceeEEecccCCCchhhhccCCCC--------------------CcccCHHHHHHHHhhC-----------------
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEA--------------------TRRLDLAEGLKIAVDI----------------- 433 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~--------------------~~~l~~~~~~~ia~~i----------------- 433 (614)
..++..++||||+++|+|.+++..... ...++|..+..++.++
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Di 198 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL 198 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 345678999999999999999976432 1347898888888887
Q ss_pred -CCceeeCCCCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCC
Q 046036 434 -PSNVLLDYDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKR 508 (614)
Q Consensus 434 -~~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~ 508 (614)
|+||+++.++.+||+|||+++........ .......||+.|+| |. ...++.++|||||||+++||+| |+.
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 273 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNY-----VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 273 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTS-----EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccc-----eeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999876544321 22334678889977 86 6778999999999999999998 999
Q ss_pred CCCcccccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 509 PTDEMFADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 509 p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
||...... +.+...+.......... .....+.+++..|++.+|++|||+.|+++
T Consensus 274 p~~~~~~~-----------------~~~~~~~~~~~~~~~~~---------~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 327 (344)
T 1rjb_A 274 PYPGIPVD-----------------ANFYKLIQNGFKMDQPF---------YATEEIYIIMQSCWAFDSRKRPSFPNLTS 327 (344)
T ss_dssp SSTTCCCS-----------------HHHHHHHHTTCCCCCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CcccCCcH-----------------HHHHHHHhcCCCCCCCC---------CCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99753221 11111121111111000 01123445777999999999999999999
Q ss_pred HHHHhHHHh
Q 046036 589 EMNVIKEVL 597 (614)
Q Consensus 589 ~L~~i~~~~ 597 (614)
.|+.+....
T Consensus 328 ~l~~~~~~~ 336 (344)
T 1rjb_A 328 FLGCQLADA 336 (344)
T ss_dssp HHHHHC---
T ss_pred HHHHHHHHH
Confidence 998876543
No 142
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.84 E-value=8e-22 Score=203.58 Aligned_cols=175 Identities=22% Similarity=0.275 Sum_probs=126.1
Q ss_pred CCCCceeEEecccCCCchhhhccCCC----CCcccCHHHHHHHHhhC------------------CCceeeCCCC---Ce
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNE----ATRRLDLAEGLKIAVDI------------------PSNVLLDYDM---TA 445 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~----~~~~l~~~~~~~ia~~i------------------~~NILld~~~---~~ 445 (614)
..++..++|||||++|+|.+++.... ....++|..+..++.++ |+|||++.++ .+
T Consensus 144 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence 34566799999999999999997532 22458999888888877 9999999554 59
Q ss_pred eecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHH
Q 046036 446 YVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLH 521 (614)
Q Consensus 446 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~ 521 (614)
||+|||+++........ .......||+.|+| |. ...++.++|||||||+++||+| |+.||.....
T Consensus 224 kL~DFG~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~------ 292 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYY-----RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------ 292 (367)
T ss_dssp EECCCHHHHHHHHHSSC-----TTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------
T ss_pred EECCCcccccccccccc-----ccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH------
Confidence 99999999865432211 22334678999977 87 6788999999999999999998 9999975321
Q ss_pred HHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 522 NFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
.+......... ...+.. .+...+.+++..|++.+|++|||+.||++.|+.+.+..
T Consensus 293 -----------~~~~~~i~~~~-~~~~~~---------~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 293 -----------QEVLEFVTSGG-RMDPPK---------NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp -----------HHHHHHHHTTC-CCCCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -----------HHHHHHHHcCC-CCCCCc---------cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 11111111111 111111 11123456778999999999999999999999887654
No 143
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.84 E-value=1.5e-21 Score=192.58 Aligned_cols=171 Identities=23% Similarity=0.300 Sum_probs=125.2
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 75 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 152 (269)
T 4hcu_A 75 LEQAPICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 152 (269)
T ss_dssp CSSSSEEEEEECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTG
T ss_pred ecCCceEEEEEeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccc
Confidence 3456789999999999999999754 2358888888887776 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++....... .......||+.|+| |. ...++.++||||+||+++||+| |+.||.....
T Consensus 153 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~------------- 213 (269)
T 4hcu_A 153 TRFVLDDQY------TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------------- 213 (269)
T ss_dssp GGGBCCHHH------HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------------
T ss_pred ccccccccc------ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-------------
Confidence 987654321 12334567888977 87 5788999999999999999999 9999975321
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
.+.............+.. . ...+.++...|++.+|++|||+.|+++.|+++.+.
T Consensus 214 ----~~~~~~~~~~~~~~~~~~---~-------~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 214 ----SEVVEDISTGFRLYKPRL---A-------STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ----HHHHHHHHTTCCCCCCTT---S-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----HHHHHHHhcCccCCCCCc---C-------CHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 111111111111111110 1 12344677799999999999999999999998764
No 144
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.84 E-value=1.2e-21 Score=199.04 Aligned_cols=170 Identities=21% Similarity=0.265 Sum_probs=121.7
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
++..++||||+++|+|.+++... ...+++..+..++.++ |+|||++.++.+||+|||+++
T Consensus 86 ~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 86 GSSLQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp BSSEEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred CCccEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCccc
Confidence 45688999999999999999764 2357888887777766 999999999999999999999
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
........ .......||++|+| |. ...++.++|||||||++|||+| |+.||...... .+....
T Consensus 164 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~------ 230 (325)
T 3kex_A 164 LLPPDDKQ-----LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLL------ 230 (325)
T ss_dssp GSCCCTTC-----CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHH------
T ss_pred ccCccccc-----ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHH------
Confidence 87654321 22345678889977 87 6789999999999999999999 99999753211 111111
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
........+.. +...+.+++..|++.+|++|||+.|+++.|+.+...
T Consensus 231 ---------~~~~~~~~~~~----------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 231 ---------EKGERLAQPQI----------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ---------HTTCBCCCCTT----------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ---------HcCCCCCCCCc----------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11110001100 011234567799999999999999999999988643
No 145
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.84 E-value=9.5e-22 Score=197.95 Aligned_cols=171 Identities=23% Similarity=0.285 Sum_probs=115.4
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC---------------------CCceeeCCCCC-eeecccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI---------------------PSNVLLDYDMT-AYVGDFG 451 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i---------------------~~NILld~~~~-~kl~DfG 451 (614)
+..++||||+++|+|.++++.......+++..+.+++.++ |+||+++.++. +||+|||
T Consensus 72 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg 151 (307)
T 2eva_A 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 151 (307)
T ss_dssp TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCC
T ss_pred CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccc
Confidence 3478999999999999999865433456777666655443 89999998876 7999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
+++..... .....||+.|+| |. ...++.++|||||||+++||+||+.||........
T Consensus 152 ~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---------- 211 (307)
T 2eva_A 152 TACDIQTH----------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF---------- 211 (307)
T ss_dssp C----------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH----------
T ss_pred cccccccc----------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH----------
Confidence 99765432 223569999977 87 66789999999999999999999999975322111
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhc
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLG 599 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~ 599 (614)
+.............+ .. ....+.+++..|++.+|++|||+.|+++.|+.+.+....
T Consensus 212 -----~~~~~~~~~~~~~~~---~~-------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 212 -----RIMWAVHNGTRPPLI---KN-------LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp -----HHHHHHHTTCCCCCB---TT-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred -----HHHHHHhcCCCCCcc---cc-------cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 111111111110000 01 112344677799999999999999999999998776543
No 146
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.84 E-value=6.2e-22 Score=210.41 Aligned_cols=169 Identities=24% Similarity=0.327 Sum_probs=123.2
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
.+..++|||||++|+|.++++... ...+++..+.+++.++ |+|||++.++.+||+|||+++
T Consensus 254 ~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~ 332 (454)
T 1qcf_A 254 KEPIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 332 (454)
T ss_dssp SSSCEEEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGG
T ss_pred CCccEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCce
Confidence 456799999999999999997532 2357888888877776 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
....... .......+++.|+| |. ...++.++|||||||++|||+| |+.||.....
T Consensus 333 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--------------- 391 (454)
T 1qcf_A 333 VIEDNEY------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------------- 391 (454)
T ss_dssp GBCCHHH------HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---------------
T ss_pred EcCCCce------eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH---------------
Confidence 7653211 11233456788977 87 6789999999999999999999 9999975321
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKE 595 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~ 595 (614)
.+.......+...+.|. .+...+.+++..||+.+|++||||.+|++.|+.+..
T Consensus 392 --~~~~~~i~~~~~~~~~~----------~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 392 --PEVIRALERGYRMPRPE----------NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp --HHHHHHHHHTCCCCCCT----------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred --HHHHHHHHcCCCCCCCC----------CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 11111111111111111 112345567789999999999999999999987643
No 147
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.84 E-value=1.6e-21 Score=201.48 Aligned_cols=178 Identities=20% Similarity=0.316 Sum_probs=116.6
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... ...+++..+..++.++ |+|||+++++.+||+|||++
T Consensus 162 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a 239 (373)
T 3c1x_A 162 SEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 239 (373)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred CCCCeEEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccc
Confidence 345679999999999999999754 3357888888777766 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+........ .........||+.|+| |. ...++.++|||||||++|||+| |..||...... ......
T Consensus 240 ~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~----- 309 (373)
T 3c1x_A 240 RDMYDKEFD---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL----- 309 (373)
T ss_dssp ---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHH-----
T ss_pred ccccccccc---cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHH-----
Confidence 876543211 0112234567889977 87 6788999999999999999999 66677643211 111111
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhccc
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLGVR 601 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~~~ 601 (614)
........+. .+...+.+++..||+.+|++|||+.|+++.|+.+...+.+..
T Consensus 310 ----------~~~~~~~~p~----------~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~ 361 (373)
T 3c1x_A 310 ----------LQGRRLLQPE----------YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH 361 (373)
T ss_dssp ----------HTTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred ----------HcCCCCCCCC----------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence 1111101111 011234467779999999999999999999999987766543
No 148
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.84 E-value=1.6e-21 Score=206.81 Aligned_cols=166 Identities=24% Similarity=0.299 Sum_probs=121.4
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
++..++|||||++|+|.+++...+ ...+++..+..++.++ |+|||++.++.+||+|||+++
T Consensus 259 ~~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 337 (450)
T 1k9a_A 259 KGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 337 (450)
T ss_dssp TSCEEEEEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCceEEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence 346899999999999999998542 2347888888887777 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
..... .....+++.|+| |. ...++.++|||||||++|||+| |+.||....... .
T Consensus 338 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~---------- 395 (450)
T 1k9a_A 338 EASST----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--V---------- 395 (450)
T ss_dssp ECC----------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--H----------
T ss_pred ccccc----------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--H----------
Confidence 54322 122367888977 87 6789999999999999999999 999997532211 1
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
.. .+.......... .+...+.+++..||+.+|++|||+.|+++.|+.++..
T Consensus 396 -----~~-~i~~~~~~~~p~---------~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 396 -----VP-RVEKGYKMDAPD---------GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp -----HH-HHHTTCCCCCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----HH-HHHcCCCCCCCC---------cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 11 111111111100 1122344677799999999999999999999998765
No 149
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.84 E-value=5.3e-21 Score=193.69 Aligned_cols=161 Identities=19% Similarity=0.248 Sum_probs=117.9
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... .++|..+..++.++ |+||+++.++.+||+|||++
T Consensus 113 ~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~ 188 (321)
T 2c30_A 113 VGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFC 188 (321)
T ss_dssp ETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred ECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeee
Confidence 356789999999999999998743 48999999888877 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
+....... ......||+.|+| |+ ...++.++|||||||+++||+||+.||...... ..
T Consensus 189 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~---------- 249 (321)
T 2c30_A 189 AQISKDVP-------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QA---------- 249 (321)
T ss_dssp EECCSSSC-------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HH----------
T ss_pred eecccCcc-------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HH----------
Confidence 87654321 2344689999977 87 667899999999999999999999999753211 11
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.. .+.....+........ ...+.++...|++.+|++|||+.|+++
T Consensus 250 -----~~-~~~~~~~~~~~~~~~~-------~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 250 -----MK-RLRDSPPPKLKNSHKV-------SPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -----HH-HHHHSSCCCCTTGGGS-------CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----HH-HHhcCCCCCcCccccC-------CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 1111111111111111 112345667999999999999999986
No 150
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.84 E-value=1.9e-21 Score=191.63 Aligned_cols=171 Identities=21% Similarity=0.323 Sum_probs=124.9
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 73 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~ 150 (268)
T 3sxs_A 73 SKEYPIYIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGM 150 (268)
T ss_dssp CSSSSEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTC
T ss_pred ccCCceEEEEEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCcc
Confidence 4456789999999999999999753 3358999988888887 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++....... .......||+.|+| |. ...++.++||||+|++++||+| |+.||+.....
T Consensus 151 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------------ 212 (268)
T 3sxs_A 151 TRYVLDDQY------VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS------------ 212 (268)
T ss_dssp EEECCTTCE------EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH------------
T ss_pred ceecchhhh------hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH------------
Confidence 987654321 12233556778977 77 5678899999999999999999 99999753211
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
+.............+.. . ...+.++...|++.+|++|||+.|+++.|+.+++.
T Consensus 213 -----~~~~~~~~~~~~~~~~~---~-------~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 213 -----EVVLKVSQGHRLYRPHL---A-------SDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -----HHHHHHHTTCCCCCCTT---S-------CHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -----HHHHHHHcCCCCCCCCc---C-------hHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11111111111111111 0 11344677899999999999999999999988654
No 151
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.84 E-value=6e-22 Score=197.61 Aligned_cols=174 Identities=22% Similarity=0.314 Sum_probs=113.5
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
..+..++||||+++|+|.++++.. ...+++..+.+++.++ |+||+++.++.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 167 (289)
T 3og7_A 90 TAPQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167 (289)
T ss_dssp CSSSCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--
T ss_pred cCCccEEEEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceec
Confidence 345678999999999999999754 3458998888888877 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc-----cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-----VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-----~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
+........ .......||+.|+| |. ...++.++|||||||+++||++|+.||....... .+...+
T Consensus 168 ~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~--- 238 (289)
T 3og7_A 168 TEKSRWSGS-----HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMV--- 238 (289)
T ss_dssp ---------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHH---
T ss_pred ccccccccc-----ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHh---
Confidence 866532211 22344679999977 76 3467889999999999999999999997532211 111111
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIK 594 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~ 594 (614)
............. ..+...+.+++..|++.+|++|||+.|++++|+++.
T Consensus 239 ------------~~~~~~~~~~~~~------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 239 ------------GRGSLSPDLSKVR------SNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp ------------HHTSCCCCTTSSC------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ------------cccccCcchhhcc------ccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 1111111110000 011234556778999999999999999999998875
No 152
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.84 E-value=1e-21 Score=200.99 Aligned_cols=176 Identities=23% Similarity=0.269 Sum_probs=125.3
Q ss_pred CCCCceeEEecccCCCchhhhccCCCC---------------------CcccCHHHHHHHHhhC----------------
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEA---------------------TRRLDLAEGLKIAVDI---------------- 433 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~---------------------~~~l~~~~~~~ia~~i---------------- 433 (614)
..++..++||||+++|+|.+++..... ...+++..+..++.++
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D 199 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD 199 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 345678999999999999999975321 2468999998888887
Q ss_pred --CCceeeCCCCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CC
Q 046036 434 --PSNVLLDYDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GK 507 (614)
Q Consensus 434 --~~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~ 507 (614)
|+||+++.++.+||+|||+++........ .......||+.|+| |. ...++.++|||||||++|||+| |+
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 274 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYY-----KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 274 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCB-----C----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccc-----cccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCC
Confidence 99999999999999999999876433211 12334678999977 87 6678999999999999999999 99
Q ss_pred CCCCcccccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHH
Q 046036 508 RPTDEMFADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMV 587 (614)
Q Consensus 508 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~ 587 (614)
.||..... .+.............+. .....+.+++..|++.+|++||++.||+
T Consensus 275 ~p~~~~~~-----------------~~~~~~~~~~~~~~~~~----------~~~~~l~~li~~~l~~~p~~Rps~~~~~ 327 (343)
T 1luf_A 275 QPYYGMAH-----------------EEVIYYVRDGNILACPE----------NCPLELYNLMRLCWSKLPADRPSFCSIH 327 (343)
T ss_dssp CTTTTSCH-----------------HHHHHHHHTTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CcCCCCCh-----------------HHHHHHHhCCCcCCCCC----------CCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 99975321 11111111111111111 1112345677899999999999999999
Q ss_pred HHHHHhHHHhh
Q 046036 588 MEMNVIKEVLL 598 (614)
Q Consensus 588 ~~L~~i~~~~~ 598 (614)
+.|+++.+...
T Consensus 328 ~~L~~~~~~~~ 338 (343)
T 1luf_A 328 RILQRMCERAE 338 (343)
T ss_dssp HHHHHTTC---
T ss_pred HHHHHHHhhhh
Confidence 99998876543
No 153
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.84 E-value=2.4e-21 Score=195.51 Aligned_cols=176 Identities=19% Similarity=0.242 Sum_probs=127.0
Q ss_pred CCCCceeEEecccCCCchhhhccCCCC---------------CcccCHHHHHHHHhhC------------------CCce
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEA---------------TRRLDLAEGLKIAVDI------------------PSNV 437 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~---------------~~~l~~~~~~~ia~~i------------------~~NI 437 (614)
..++..++||||+++|+|.+++..... ...+++..+.+++.++ |+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Ni 176 (313)
T 1t46_A 97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 176 (313)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceE
Confidence 345678999999999999999975431 1248999998888877 9999
Q ss_pred eeCCCCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcc
Q 046036 438 LLDYDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEM 513 (614)
Q Consensus 438 Lld~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~ 513 (614)
+++.++.+||+|||+++........ .......||+.|+| |. ...++.++|||||||+++||+| |+.||...
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNY-----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTS-----EECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred EEcCCCCEEEccccccccccccccc-----eeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 9999999999999999877654321 12334567889977 86 6788999999999999999999 99998753
Q ss_pred cccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHh
Q 046036 514 FADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVI 593 (614)
Q Consensus 514 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i 593 (614)
.... .. ...+. ......... .....+.+++..|++.+|++|||+.|+++.|+++
T Consensus 252 ~~~~-~~------------~~~~~----~~~~~~~~~---------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 252 PVDS-KF------------YKMIK----EGFRMLSPE---------HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp CSSH-HH------------HHHHH----HTCCCCCCT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cchh-HH------------HHHhc----cCCCCCCcc---------cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 2211 11 11111 111110000 1112344677799999999999999999999987
Q ss_pred HHHh
Q 046036 594 KEVL 597 (614)
Q Consensus 594 ~~~~ 597 (614)
....
T Consensus 306 ~~~~ 309 (313)
T 1t46_A 306 ISES 309 (313)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6643
No 154
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.84 E-value=1e-21 Score=210.75 Aligned_cols=171 Identities=20% Similarity=0.266 Sum_probs=125.0
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccc
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfG 451 (614)
+..++..++|||||++|+|.+++.... ...+++..+..++.++ |+|||++.++.+||+|||
T Consensus 285 ~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG 363 (495)
T 1opk_A 285 CTREPPFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFG 363 (495)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTT
T ss_pred EecCCcEEEEEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecc
Confidence 345667899999999999999997542 3458899888887777 999999999999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhh
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~ 527 (614)
+++....... .......+++.|+| |. ...++.++|||||||++|||+| |+.||...... .+..
T Consensus 364 ~a~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~----- 430 (495)
T 1opk_A 364 LSRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYE----- 430 (495)
T ss_dssp CEECCTTCCE------ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH-----
T ss_pred cceeccCCce------eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHH-----
Confidence 9987654321 12233556788977 87 6778999999999999999999 99999753221 1111
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIK 594 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~ 594 (614)
.+.......... .+...+.+++..||+.+|++||||.||++.|+.+.
T Consensus 431 -----------~~~~~~~~~~~~---------~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 431 -----------LLEKDYRMERPE---------GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp -----------HHHTTCCCCCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -----------HHHcCCCCCCCC---------CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 111111110000 11223456778999999999999999999998763
No 155
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.84 E-value=3.5e-21 Score=191.83 Aligned_cols=184 Identities=16% Similarity=0.175 Sum_probs=134.2
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
.+..++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 158 (287)
T 1u59_A 81 AEALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSK 158 (287)
T ss_dssp SSSEEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CCCcEEEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECccccee
Confidence 45579999999999999999753 3358899988888887 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
........ ........||+.|+| |. ...++.++|||||||+++||+| |+.||...... .+
T Consensus 159 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~---------- 222 (287)
T 1u59_A 159 ALGADDSY----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EV---------- 222 (287)
T ss_dssp ECTTCSCE----ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HH----------
T ss_pred eeccCcce----eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HH----------
Confidence 77543221 112233567899977 87 5678999999999999999999 99999753211 11
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhcccccCccccc
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLGVRINGERRIR 609 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~~~~~~~~~~~ 609 (614)
............+. .....+.++...|++.+|++||++.|+++.|+.+........-.+..+|+
T Consensus 223 -----~~~i~~~~~~~~~~----------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~~~~~~ 286 (287)
T 1u59_A 223 -----MAFIEQGKRMECPP----------ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHHHHHH 286 (287)
T ss_dssp -----HHHHHTTCCCCCCT----------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSSCCCTTC
T ss_pred -----HHHHhcCCcCCCCC----------CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccCCccccC
Confidence 11111111001111 11123446778999999999999999999999998887777666666554
No 156
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.84 E-value=2.8e-21 Score=201.74 Aligned_cols=167 Identities=16% Similarity=0.194 Sum_probs=112.7
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCC---CCCeeecccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDY---DMTAYVGDFG 451 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~---~~~~kl~DfG 451 (614)
++..++|||||++|+|.+++.... ...+++..+..|+.++ |+|||++. ++.+||+|||
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred CcEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecc
Confidence 566899999999999999998642 3468999998888877 99999998 7899999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
+++...... .....+||+.|+| |+ ...++.++|||||||++|||+||+.||.........
T Consensus 210 ~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--------- 272 (400)
T 1nxk_A 210 FAKETTSHN--------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--------- 272 (400)
T ss_dssp TCEECC-------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC---------
T ss_pred cccccCCCC--------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc---------
Confidence 998765332 2345789999977 87 678899999999999999999999999754321110
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
..... ....+........... .-..+.++...|++.+|++|||+.|+++
T Consensus 273 -~~~~~---~i~~~~~~~~~~~~~~-------~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 273 -PGMKT---RIRMGQYEFPNPEWSE-------VSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp -CSHHH---HHHHTCCCCCTTTTTT-------SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -HHHHH---HHHcCcccCCCccccc-------CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000 1111111110000011 1123446777999999999999999986
No 157
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.84 E-value=3.5e-21 Score=196.28 Aligned_cols=178 Identities=18% Similarity=0.249 Sum_probs=127.5
Q ss_pred CCCCceeEEecccCCCchhhhccCCCC-------------CcccCHHHHHHHHhhC------------------CCceee
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEA-------------TRRLDLAEGLKIAVDI------------------PSNVLL 439 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~~i------------------~~NILl 439 (614)
..++..++||||+++|+|.+++..... ...++|..+.+++.++ |+||++
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE
Confidence 446678999999999999999976431 2348898888888877 999999
Q ss_pred CCCCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccc
Q 046036 440 DYDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFA 515 (614)
Q Consensus 440 d~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~ 515 (614)
+.++.+||+|||+++........ .......||+.|+| |. ...++.++|||||||++|||+| |+.||.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSE-----ECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred cCCCCEEEccccccccccccccc-----cccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence 99999999999999876543211 12334567889977 86 6678999999999999999999 9999875321
Q ss_pred cCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHH
Q 046036 516 DCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKE 595 (614)
Q Consensus 516 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~ 595 (614)
. +.............+. .....+.+++..|++.+|++|||+.|+++.|+.+..
T Consensus 266 ~-----------------~~~~~~~~~~~~~~~~----------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 266 E-----------------ELFKLLKEGHRMDKPA----------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp H-----------------HHHHHHHHTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H-----------------HHHHHHhcCCCCCCCc----------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1 1111111111111110 111234467779999999999999999999999987
Q ss_pred Hhhcc
Q 046036 596 VLLGV 600 (614)
Q Consensus 596 ~~~~~ 600 (614)
.....
T Consensus 319 ~~~~~ 323 (334)
T 2pvf_A 319 LTTNE 323 (334)
T ss_dssp HHC--
T ss_pred ccccC
Confidence 65443
No 158
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.84 E-value=1.7e-21 Score=197.15 Aligned_cols=186 Identities=20% Similarity=0.262 Sum_probs=128.8
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
....++||||+++|+|.+++... .+++..+..++.++ |+||+++.++.+||+|||+++
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 107 AASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp TTEEEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred CceEEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccc
Confidence 45679999999999999999753 38888888888877 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
........ ........||+.|+| |. ...++.++||||+||+++||+||+.||......... .......
T Consensus 183 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~-----~~~~~~~ 253 (318)
T 3lxp_A 183 AVPEGHEY----YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE-----LIGIAQG 253 (318)
T ss_dssp ECCTTCSE----EEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH-----HHCSCCH
T ss_pred cccccccc----cccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh-----hhccccc
Confidence 77543211 112234568888977 87 567889999999999999999999998653211000 0011111
Q ss_pred --hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhcc
Q 046036 532 --VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLGV 600 (614)
Q Consensus 532 --~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~~ 600 (614)
....+...+......... . .....+.+++..|++.+|++|||+.|+++.|+.+.+.+...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~--~-------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 254 QMTVLRLTELLERGERLPRP--D-------KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp HHHHHHHHHHHHTTCCCCCC--T-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred chhHHHHHHHHhcccCCCCC--c-------cccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 011122222222111110 0 11234556777999999999999999999999999887654
No 159
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=2.7e-20 Score=177.46 Aligned_cols=132 Identities=15% Similarity=0.123 Sum_probs=64.8
Q ss_pred ccEEEccCCcccccCC-CCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhh
Q 046036 65 LRILDAGGNQFAGDIP-AGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESL 143 (614)
Q Consensus 65 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~ 143 (614)
+++|+|++|+|++..| ..|..+++|++|+|++|++++..+..|.++++|++|+ |++|+|++..+..|
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~------------Ls~N~l~~~~~~~~ 101 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEIL------------LTSNRLENVQHKMF 101 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE------------CCSSCCCCCCGGGG
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEE------------CCCCccCccCHhHh
Confidence 3444444444443322 2244444444444444444444444444444444444 45555544444445
Q ss_pred hccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCC
Q 046036 144 ENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLS 208 (614)
Q Consensus 144 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 208 (614)
..+++|++|+|++|+|++..|..+..+++|++|+|++|.|++..|..|..+++|+.|+|++|.+.
T Consensus 102 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 102 KGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp TTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred cCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 55555555555555555444455555555555555555555444555555555555555555554
No 160
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.84 E-value=3.9e-21 Score=211.31 Aligned_cols=173 Identities=17% Similarity=0.207 Sum_probs=122.7
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
+..++|||||++|+|.+++... ...+++..+..|+.++ |+|||++.++.+||+|||+++.
T Consensus 408 ~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~ 485 (613)
T 2ozo_A 408 EALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKA 485 (613)
T ss_dssp SSEEEEEECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTT
T ss_pred CCeEEEEEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCccc
Confidence 5689999999999999999754 3468999999888887 9999999999999999999987
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCCC
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
....... ........+++.|+| |+ ...++.++|||||||++|||+| |+.||......
T Consensus 486 ~~~~~~~----~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------------- 546 (613)
T 2ozo_A 486 LGADDSY----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------------- 546 (613)
T ss_dssp CC------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH---------------
T ss_pred ccCCCce----eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH---------------
Confidence 7543221 111223456788977 87 6789999999999999999998 99999753221
Q ss_pred hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhc
Q 046036 532 VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLG 599 (614)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~ 599 (614)
++......+.....+. .+...+.+++..||+.+|++||++.+|++.|+.+......
T Consensus 547 --~~~~~i~~~~~~~~p~----------~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 547 --EVMAFIEQGKRMECPP----------ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp --HHHHHHHTTCCCCCCT----------TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred --HHHHHHHcCCCCCCCC----------cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 1111111111001111 1123455678899999999999999999999988766533
No 161
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.84 E-value=2.6e-21 Score=198.79 Aligned_cols=188 Identities=12% Similarity=0.061 Sum_probs=129.5
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCC--Ceeeccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDM--TAYVGDFGL 452 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~--~~kl~DfGl 452 (614)
++..++||||+ +|+|.+++.... ...+++..+..|+.++ |+|||++.++ .+||+|||+
T Consensus 130 ~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~ 207 (352)
T 2jii_A 130 DKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGF 207 (352)
T ss_dssp TTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGG
T ss_pred CcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcc
Confidence 56789999999 999999998542 3569999999998888 9999999998 899999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++.+..................||+.|+| |. ...++.++|||||||++|||+||+.||.........+.....
T Consensus 208 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~---- 283 (352)
T 2jii_A 208 AFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQ---- 283 (352)
T ss_dssp CBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHH----
T ss_pred eeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHH----
Confidence 98775433211111112244689999977 87 567899999999999999999999999764322111111110
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhc
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLG 599 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~ 599 (614)
....... ..+...... ......+.+++..|++.+|++|||+.||++.|+++.+....
T Consensus 284 --------~~~~~~~-~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 284 --------KFVDKPG-PFVGPCGHW----IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp --------HHHHSCC-CEECTTSCE----ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred --------hccCChh-hhhhhcccc----CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 0000000 000000000 00012344667799999999999999999999998876543
No 162
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.84 E-value=3.1e-21 Score=196.36 Aligned_cols=182 Identities=15% Similarity=0.133 Sum_probs=128.1
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCC-----eeec
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMT-----AYVG 448 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~-----~kl~ 448 (614)
.++..++||||+ +|+|.+++... ...+++..+..++.++ |+|||++.++. +||+
T Consensus 76 ~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~ 152 (330)
T 2izr_A 76 CGKYNAMVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHII 152 (330)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred cCCccEEEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEE
Confidence 356789999999 99999999753 2368999999988888 99999999887 9999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
|||+++.+..................||+.|+| |. ...++.++|||||||+++||+||+.||........ ....
T Consensus 153 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~--~~~~- 229 (330)
T 2izr_A 153 DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL--KERY- 229 (330)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH--HHHH-
T ss_pred EcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH--HHHH-
Confidence 999999765443211111112345789999977 87 66789999999999999999999999986432211 0000
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
..+......... +...+....+.+++..|++.+|.+||++.+|++.|+.+....
T Consensus 230 -------~~i~~~~~~~~~-----------~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 230 -------QKIGDTKRATPI-----------EVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp -------HHHHHHHHHSCH-----------HHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -------HHHHhhhccCCH-----------HHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 000000000000 000000115567778999999999999999999999887654
No 163
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.84 E-value=9.9e-22 Score=200.29 Aligned_cols=178 Identities=20% Similarity=0.217 Sum_probs=126.8
Q ss_pred CCCCceeEEecccCCCchhhhccCCC-----------CCcccCHHHHHHHHhhC------------------CCceeeCC
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNE-----------ATRRLDLAEGLKIAVDI------------------PSNVLLDY 441 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~-----------~~~~l~~~~~~~ia~~i------------------~~NILld~ 441 (614)
..++..++||||+++|+|.+++.... ....+++..+..++.++ |+||+++.
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN 199 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEG
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECC
Confidence 34567899999999999999997431 12357888888888777 99999999
Q ss_pred CCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccC
Q 046036 442 DMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADC 517 (614)
Q Consensus 442 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~ 517 (614)
++.+||+|||+++........ .......||+.|+| |. ...++.++|||||||+++||+| |+.||......
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~- 273 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNY-----IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN- 273 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTS-----EECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-
T ss_pred CCeEEECccccccccccccce-----eecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-
Confidence 999999999999876543221 12334567889977 86 6778999999999999999999 99998753211
Q ss_pred chHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 518 LSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 518 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
+.+...+.......... .....+.+++..|++.+|++|||+.||++.|+++....
T Consensus 274 ----------------~~~~~~~~~~~~~~~~~---------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 274 ----------------SKFYKLVKDGYQMAQPA---------FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp ----------------HHHHHHHHHTCCCCCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----------------HHHHHHHhcCCCCCCCC---------CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 11111111111100000 01123446777999999999999999999999887665
Q ss_pred hc
Q 046036 598 LG 599 (614)
Q Consensus 598 ~~ 599 (614)
.+
T Consensus 329 ~~ 330 (333)
T 2i1m_A 329 RR 330 (333)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 164
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.84 E-value=3.8e-21 Score=191.14 Aligned_cols=171 Identities=20% Similarity=0.293 Sum_probs=125.2
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~ 166 (283)
T 3gen_A 89 TKQRPIFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL 166 (283)
T ss_dssp CSSSSEEEEECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTG
T ss_pred ecCCCeEEEEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccc
Confidence 4566789999999999999999753 2358899888888877 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++....... .......||+.|+| |. ...++.++||||+||+++||+| |+.||......
T Consensus 167 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~------------ 228 (283)
T 3gen_A 167 SRYVLDDEY------TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------------ 228 (283)
T ss_dssp GGGBCCHHH------HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------------
T ss_pred ccccccccc------ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh------------
Confidence 987643321 12233557788977 87 5778999999999999999999 99999753211
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
+... .+.......... . ....+.++...|++.+|++|||+.|+++.|+++.+.
T Consensus 229 -----~~~~-~~~~~~~~~~~~--~-------~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 229 -----ETAE-HIAQGLRLYRPH--L-------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp -----HHHH-HHHTTCCCCCCT--T-------CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----HHHH-HHhcccCCCCCC--c-------CCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 1111 111111111100 0 012344677899999999999999999999988654
No 165
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.84 E-value=2.2e-21 Score=195.83 Aligned_cols=174 Identities=21% Similarity=0.303 Sum_probs=125.9
Q ss_pred CCCCceeEEecccCCCchhhhccCCCC---------------------CcccCHHHHHHHHhhC----------------
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEA---------------------TRRLDLAEGLKIAVDI---------------- 433 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~---------------------~~~l~~~~~~~ia~~i---------------- 433 (614)
..++..++||||+++|+|.+++..... ...+++..+.+++.++
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d 175 (314)
T 2ivs_A 96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD 175 (314)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence 345678999999999999999975421 2348888888888877
Q ss_pred --CCceeeCCCCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CC
Q 046036 434 --PSNVLLDYDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GK 507 (614)
Q Consensus 434 --~~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~ 507 (614)
|+||+++.++.+||+|||+++........ .......||+.|+| |. ...++.++|||||||+++||+| |+
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 250 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSY-----VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCE-----ECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred cchheEEEcCCCCEEEccccccccccccccc-----eeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCC
Confidence 99999999999999999999876543321 22334567889977 86 6678999999999999999999 99
Q ss_pred CCCCcccccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHH
Q 046036 508 RPTDEMFADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMV 587 (614)
Q Consensus 508 ~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~ 587 (614)
.||...... .+.. .+........ .. .....+.++...|++.+|++||++.|++
T Consensus 251 ~p~~~~~~~--~~~~----------------~~~~~~~~~~--~~-------~~~~~~~~li~~~l~~dp~~Rps~~~l~ 303 (314)
T 2ivs_A 251 NPYPGIPPE--RLFN----------------LLKTGHRMER--PD-------NCSEEMYRLMLQCWKQEPDKRPVFADIS 303 (314)
T ss_dssp CSSTTCCGG--GHHH----------------HHHTTCCCCC--CT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCCCCHH--HHHH----------------HhhcCCcCCC--Cc-------cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999753221 1111 1111110000 00 1112344677899999999999999999
Q ss_pred HHHHHhHHH
Q 046036 588 MEMNVIKEV 596 (614)
Q Consensus 588 ~~L~~i~~~ 596 (614)
+.|+++...
T Consensus 304 ~~l~~~~~~ 312 (314)
T 2ivs_A 304 KDLEKMMVK 312 (314)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999988654
No 166
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.84 E-value=3.2e-21 Score=196.81 Aligned_cols=161 Identities=23% Similarity=0.270 Sum_probs=110.1
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
...+..++|||||++|+|.+++... ..+++..+..++.++ |+|||+++++.+||+|||+
T Consensus 78 ~~~~~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~ 154 (347)
T 3zgw_A 78 ETANKIFMVLEYCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGL 154 (347)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EeCCEEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccC
Confidence 3456789999999999999999743 358888888888777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCC-CCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VAR-YQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~-~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++....... ......+||+.|+| |. ... ++.++||||+||+++||++|+.||+....
T Consensus 155 a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~------------- 215 (347)
T 3zgw_A 155 CAKPKGNKD------YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV------------- 215 (347)
T ss_dssp CBC--------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH-------------
T ss_pred cccccCCCC------ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH-------------
Confidence 986544321 12345789999977 87 333 48899999999999999999999975211
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.......+.... |.. .. ..+.++...|++.+|++|||++|+++
T Consensus 216 ----~~~~~~i~~~~~~~-p~~---~s-------~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 216 ----MALYKKIMRGKYDV-PKW---LS-------PSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp ----HHHHHHHHHTCCCC-CTT---CC-------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHHHcCCCCC-CCC---CC-------HHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 12222222222111 110 11 12334667899999999999999986
No 167
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.84 E-value=2.6e-21 Score=192.16 Aligned_cols=171 Identities=20% Similarity=0.249 Sum_probs=114.0
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
++..++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+++
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred cCccEEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECcccccc
Confidence 45678999999999999999754 2358888888887777 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
....... .......+|+.|+| |. ...++.++|||||||+++||++ |+.||...... ....
T Consensus 165 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~-------- 228 (281)
T 1mp8_A 165 YMEDSTY------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIG-------- 228 (281)
T ss_dssp --------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH--------
T ss_pred ccCcccc------cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHH--------
Confidence 7654321 12234567888977 87 6778999999999999999997 99999753221 1111
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhh
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLL 598 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~ 598 (614)
........+.+. .....+.++...|++.+|++|||+.|+++.|+.+.+...
T Consensus 229 -------~i~~~~~~~~~~----------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 229 -------RIENGERLPMPP----------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp -------HHHTTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -------HHHcCCCCCCCC----------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111111000110 111234467779999999999999999999999876543
No 168
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=5.2e-21 Score=182.41 Aligned_cols=153 Identities=18% Similarity=0.215 Sum_probs=109.3
Q ss_pred EecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccC
Q 046036 128 LNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHML 207 (614)
Q Consensus 128 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l 207 (614)
+++++|+++ .+|..+. ++|+.|+|++|+|++..+..+..+++|++|+|++|.|++..|..|.++++|++|+|++|.+
T Consensus 16 v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 92 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 92 (220)
T ss_dssp EECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCC
T ss_pred EEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcC
Confidence 345566655 3343332 4666666666666655555666666777777777777666666677777777777777777
Q ss_pred CCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccC
Q 046036 208 SDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQL 283 (614)
Q Consensus 208 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 283 (614)
+...+..|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+..
T Consensus 93 ~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 93 TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 7665566677777777777777777777778888888888888888888777777888888888888888887654
No 169
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=4.2e-21 Score=191.37 Aligned_cols=167 Identities=23% Similarity=0.323 Sum_probs=69.6
Q ss_pred cccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhh
Q 046036 64 KLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESL 143 (614)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~ 143 (614)
+|+.|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|++|+ |++|++++ + ..+
T Consensus 47 ~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~------------l~~n~l~~-~-~~l 108 (291)
T 1h6t_A 47 SIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLF------------LDENKVKD-L-SSL 108 (291)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE------------CCSSCCCC-G-GGG
T ss_pred cccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEE------------CCCCcCCC-C-hhh
Confidence 44444444444442 22 24444444444444444443222 44444444443 44444442 1 124
Q ss_pred hccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchH
Q 046036 144 ENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEH 223 (614)
Q Consensus 144 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 223 (614)
..+++|++|+|++|++++. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|+.
T Consensus 109 ~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~ 182 (291)
T 1h6t_A 109 KDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQN 182 (291)
T ss_dssp TTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred ccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCE
Confidence 4444444444444444421 2233444444444444444422 234444444444444444443322 333344444
Q ss_pred HhccCccccccCCccccCCCccceEEccCCcCc
Q 046036 224 LLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLS 256 (614)
Q Consensus 224 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 256 (614)
|+|++|.+++ ++ .+..+++|+.|++++|+++
T Consensus 183 L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 183 LYLSKNHISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp EECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred EECCCCcCCC-Ch-hhccCCCCCEEECcCCccc
Confidence 4444444332 12 1334444444444444443
No 170
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.83 E-value=5.6e-21 Score=193.45 Aligned_cols=163 Identities=17% Similarity=0.178 Sum_probs=119.8
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCC--CCCeeecccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDY--DMTAYVGDFG 451 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~--~~~~kl~DfG 451 (614)
..+..++|||||++|+|.+++... ...+++..+..++.++ |+|||++. ++.+||+|||
T Consensus 72 ~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 72 SMEELVMIFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp ETTEEEEEECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred cCCEEEEEEEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 356789999999999999999753 2358888888888877 99999997 7899999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
+++...... ......||+.|+| |. ...++.++|||||||++|||+||+.||.....
T Consensus 150 ~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------------- 208 (321)
T 1tki_A 150 QARQLKPGD--------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN------------- 208 (321)
T ss_dssp TCEECCTTC--------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-------------
T ss_pred CCeECCCCC--------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-------------
Confidence 998775432 2345789999977 87 55678999999999999999999999975321
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+.............. ..+....+.++...|++.+|++|||+.|+++
T Consensus 209 ----~~~~~~i~~~~~~~~~~~-------~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 209 ----QQIIENIMNAEYTFDEEA-------FKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp ----HHHHHHHHHTCCCCCHHH-------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----HHHHHHHHcCCCCCChhh-------hccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 112222222211111000 0111223456778999999999999999986
No 171
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.83 E-value=3.7e-21 Score=194.40 Aligned_cols=174 Identities=21% Similarity=0.257 Sum_probs=125.6
Q ss_pred CCceeEEecccCCCchhhhccCCCC-------------CcccCHHHHHHHHhhC------------------CCceeeCC
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEA-------------TRRLDLAEGLKIAVDI------------------PSNVLLDY 441 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~~i------------------~~NILld~ 441 (614)
+...++||||+++|+|.+++..... ...+++..+..++.++ |+||+++.
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~ 183 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECC
Confidence 3458999999999999999986432 1227888888887777 99999999
Q ss_pred CCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccC
Q 046036 442 DMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADC 517 (614)
Q Consensus 442 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~ 517 (614)
++.+||+|||+++........ .......||+.|+| |. ...++.++|||||||+++||+| |+.||.......
T Consensus 184 ~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~ 258 (316)
T 2xir_A 184 KNVVKICDFGLARDIYKDPDY-----VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258 (316)
T ss_dssp GGCEEECCCGGGSCTTTCTTS-----EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH
T ss_pred CCCEEECCCccccccccCccc-----eeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH
Confidence 999999999999876543321 22334678899977 87 6778999999999999999999 999997532211
Q ss_pred chHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 518 LSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 518 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
.+...+.......... . ....+.++...|++.+|++|||+.||++.|+.+.+..
T Consensus 259 -----------------~~~~~~~~~~~~~~~~--~-------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 259 -----------------EFCRRLKEGTRMRAPD--Y-------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp -----------------HHHHHHHHTCCCCCCT--T-------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----------------HHHHHhccCccCCCCC--C-------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 1111111111000000 0 1123446777999999999999999999999887654
No 172
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.83 E-value=5.1e-21 Score=203.62 Aligned_cols=182 Identities=17% Similarity=0.185 Sum_probs=128.8
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceee---CCCCCeeeccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLL---DYDMTAYVGDF 450 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILl---d~~~~~kl~Df 450 (614)
..+..++||||+ +|+|.+++... ...++|..+..|+.++ |+|||+ +.++.+||+||
T Consensus 74 ~~~~~~lvme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 74 EGDYNVLVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred eCCEEEEEEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeC
Confidence 456779999999 99999999743 2358999999988887 999999 68899999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
|+++.+..................||+.|+| |. ...++.++|||||||++|||++|+.||......... ..
T Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~--~~---- 224 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK--QK---- 224 (483)
T ss_dssp TTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH--HH----
T ss_pred CcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH--HH----
Confidence 9999876543321111122335789999977 87 667899999999999999999999999864322110 00
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
...+....+..... .........+.+++..|++.+|++||++.+|++.|+.+...
T Consensus 225 ----~~~i~~~~~~~~~~----------~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 225 ----YEKISEKKVATSIE----------ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp ----HHHHHHHHHHSCHH----------HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ----HHHHhhccccccHH----------HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 01111111111000 00001123455788899999999999999999999988654
No 173
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.83 E-value=1.3e-22 Score=203.84 Aligned_cols=179 Identities=17% Similarity=0.173 Sum_probs=110.6
Q ss_pred ceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------------CCceeeCCCCCeeec
Q 046036 395 FKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------------PSNVLLDYDMTAYVG 448 (614)
Q Consensus 395 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------------~~NILld~~~~~kl~ 448 (614)
..++||||+++|+|.+++... .+++..+.+++.++ |+|||++.++.+||+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEe
Confidence 579999999999999999653 35555555544332 899999999999999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc--cC------CCCccCceeehhHHHHHHHhC----------CCC
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VA------RYQHKGKGYSCGILLLEIMTG----------KRP 509 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~------~~~~k~DVySfGvvllElltG----------~~p 509 (614)
|||+++........ .........||+.|+| |. .. .++.++|||||||++|||+|| +.|
T Consensus 151 DFg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p 227 (303)
T 3gxj_A 151 DLGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp CCCC-CCEETTTTE---ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCT
T ss_pred ecCcceeccCCCcc---cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecc
Confidence 99999876543221 0011234579999977 87 22 344689999999999999999 455
Q ss_pred CCcccccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHH
Q 046036 510 TDEMFADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVME 589 (614)
Q Consensus 510 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 589 (614)
|........ ...+...........+.+..+... .++...+.+++..|++.+|++|||+.||+++
T Consensus 228 ~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 291 (303)
T 3gxj_A 228 YYDLVPSDP------------SVEEMRKVVCEQKLRPNIPNRWQS----CEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp TTTTCC-CC------------CCC-CHHHHTTSCCCCCCCGGGGS----SHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred ccccCCCCc------------cHHHHHHHHHHhhcCCCccccccc----hhhHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 543221110 111122222222222222222111 2445567788999999999999999999999
Q ss_pred HHHhHHH
Q 046036 590 MNVIKEV 596 (614)
Q Consensus 590 L~~i~~~ 596 (614)
|+++.+.
T Consensus 292 L~~l~~~ 298 (303)
T 3gxj_A 292 LSQLSQQ 298 (303)
T ss_dssp HHC-CCC
T ss_pred HHHhhhh
Confidence 9877643
No 174
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.3e-20 Score=194.16 Aligned_cols=175 Identities=22% Similarity=0.181 Sum_probs=91.0
Q ss_pred cEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCc-CCCCCCEEeccCCcCcccCCccccCCCCCCcc
Q 046036 38 TYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIP-KYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKL 116 (614)
Q Consensus 38 ~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 116 (614)
+.+++++|+++ .+|..+ +..++.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|.++++|++|
T Consensus 21 ~~l~c~~~~l~-~iP~~~------~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 93 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSL------PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL 93 (361)
T ss_dssp TEEECCSSCCS-SCCSSC------CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CEEEeCCCCcC-ccCccC------CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEE
Confidence 45555555555 344431 11455556666655554444454 55556666666555555555555555555555
Q ss_pred cccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccc---cC
Q 046036 117 NPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEV---GS 193 (614)
Q Consensus 117 ~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~ 193 (614)
+ |++|+|++..+..|..+++|++|+|++|+|++..|..+..+++|+.|+|++|.|++..+..| ..
T Consensus 94 ~------------Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~ 161 (361)
T 2xot_A 94 D------------LSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNK 161 (361)
T ss_dssp E------------CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----
T ss_pred E------------CCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCccc
Confidence 4 55555555545555555566666666665555555555555556666666665553322223 34
Q ss_pred CCCCceeccCCccCCCCccccccCcccc--hHHhccCccc
Q 046036 194 LSNTQELDFSEHMLSDEIPITLGNRSKF--EHLLLGGNMF 231 (614)
Q Consensus 194 l~~L~~L~ls~N~l~~~~~~~~~~l~~L--~~L~L~~N~l 231 (614)
+++|+.|+|++|+|+...+..+..++.+ +.|+|++|.+
T Consensus 162 l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~ 201 (361)
T 2xot_A 162 LPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPL 201 (361)
T ss_dssp CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCE
T ss_pred CCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCc
Confidence 5555555555555554444444444432 4444444444
No 175
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=8.1e-21 Score=189.31 Aligned_cols=189 Identities=20% Similarity=0.274 Sum_probs=137.5
Q ss_pred CCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEE
Q 046036 13 LQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQL 92 (614)
Q Consensus 13 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 92 (614)
+..+.+..+.+++..+ +..+++|++|++++|.++.. + . +..++ +|++|+|++|++++..+ +..+++|++|
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~---~~~l~-~L~~L~L~~n~l~~~~~--l~~l~~L~~L 95 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-G---IQYLP-NVTKLFLNGNKLTDIKP--LANLKNLGWL 95 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-T---GGGCT-TCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-h---HhcCC-CCCEEEccCCccCCCcc--cccCCCCCEE
Confidence 4445566666664332 45677888888888888733 3 2 56666 78888888888875433 7788888888
Q ss_pred eccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCC
Q 046036 93 GLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFST 172 (614)
Q Consensus 93 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 172 (614)
+|++|.+++ +| .+..+++|++|+ |++|++++. ..+..+++|++|++++|++++. ..+..+++
T Consensus 96 ~l~~n~l~~-~~-~l~~l~~L~~L~------------L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~ 157 (291)
T 1h6t_A 96 FLDENKVKD-LS-SLKDLKKLKSLS------------LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTK 157 (291)
T ss_dssp ECCSSCCCC-GG-GGTTCTTCCEEE------------CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTT
T ss_pred ECCCCcCCC-Ch-hhccCCCCCEEE------------CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCC
Confidence 888888874 33 377777777766 888888753 4677888888888888888754 45777888
Q ss_pred CCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccc
Q 046036 173 LSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQG 233 (614)
Q Consensus 173 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 233 (614)
|+.|++++|.+++..+ +..+++|+.|++++|.+++. + .+..+++|+.|++++|++..
T Consensus 158 L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 158 LDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 8888888888875544 77888888888888888764 3 47788888888888888874
No 176
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.83 E-value=3.3e-21 Score=197.08 Aligned_cols=180 Identities=16% Similarity=0.160 Sum_probs=124.5
Q ss_pred ceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------------CCceeeCCCCCeeec
Q 046036 395 FKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------------PSNVLLDYDMTAYVG 448 (614)
Q Consensus 395 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------------~~NILld~~~~~kl~ 448 (614)
..++||||+++|+|.+++... .++|..+.+++.++ |+||+++.++.+||+
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEEC
T ss_pred eeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEE
Confidence 689999999999999999753 47887777766554 899999999999999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc-cC-------CCCccCceeehhHHHHHHHhC----------CCC
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VA-------RYQHKGKGYSCGILLLEIMTG----------KRP 509 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~-------~~~~k~DVySfGvvllElltG----------~~p 509 (614)
|||+++........ .........||+.|+| |. .. .++.++|||||||++|||+|| +.|
T Consensus 190 Dfg~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 190 DLGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp CCTTCEEEETTTTE---EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred ECCCceeccccccc---cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 99999876543211 0001234679999977 87 22 234789999999999999999 667
Q ss_pred CCcccccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHH
Q 046036 510 TDEMFADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVME 589 (614)
Q Consensus 510 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 589 (614)
|.......... .+...........+....+.. ..++...+.+++..|++.+|++|||+.||++.
T Consensus 267 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 267 YYDLVPSDPSV------------EEMRKVVCEQKLRPNIPNRWQ----SCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp TTTTSCSSCCH------------HHHHHHHTTSCCCCCCCGGGG----TSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred ccccCcCcccH------------HHHHHHHHHHHhCCCCccccc----chhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 65432221111 111111122222222211110 12445567788899999999999999999999
Q ss_pred HHHhHHHh
Q 046036 590 MNVIKEVL 597 (614)
Q Consensus 590 L~~i~~~~ 597 (614)
|+++.++.
T Consensus 331 L~~i~~~~ 338 (342)
T 1b6c_B 331 LSQLSQQE 338 (342)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99987653
No 177
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.83 E-value=2.2e-21 Score=205.90 Aligned_cols=168 Identities=25% Similarity=0.307 Sum_probs=117.8
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
+..++|||||++|+|.+++... ....+++..+.+++.++ |+|||+++++.+||+|||+++.
T Consensus 251 ~~~~iv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 329 (452)
T 1fmk_A 251 EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 329 (452)
T ss_dssp SSCEEEECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred CceEEEehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCcccee
Confidence 5679999999999999999743 12358898888888877 9999999999999999999987
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCCC
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
...... .......+++.|+| |. ...++.++|||||||++|||+| |+.||.....
T Consensus 330 ~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~---------------- 387 (452)
T 1fmk_A 330 IEDNEY------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 387 (452)
T ss_dssp -------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----------------
T ss_pred cCCCce------ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH----------------
Confidence 654321 12233557888977 87 6789999999999999999999 9999975321
Q ss_pred hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHH
Q 046036 532 VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKE 595 (614)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~ 595 (614)
.+.......+...+.+. .+...+.+++..||+.+|++|||++++++.|+.+..
T Consensus 388 -~~~~~~i~~~~~~~~~~----------~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 388 -REVLDQVERGYRMPCPP----------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp -HHHHHHHHTTCCCCCCT----------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred -HHHHHHHHcCCCCCCCC----------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 11111111111111111 112234567789999999999999999999987653
No 178
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.83 E-value=4.9e-21 Score=189.04 Aligned_cols=164 Identities=21% Similarity=0.301 Sum_probs=110.7
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC---------------------CCceeeCC--------
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI---------------------PSNVLLDY-------- 441 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i---------------------~~NILld~-------- 441 (614)
..++..++||||+++|+|.+++... .+++..+..++.++ |+||+++.
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~ 151 (271)
T 3dtc_A 76 LKEPNLCLVMEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLS 151 (271)
T ss_dssp CCC--CEEEEECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCS
T ss_pred ecCCceEEEEEcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccccccc
Confidence 3456789999999999999999643 57888887776665 89999986
Q ss_pred CCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCc
Q 046036 442 DMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCL 518 (614)
Q Consensus 442 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~ 518 (614)
++.+|++|||+++...... .....||+.|+| |. ...++.++||||||++++||+||+.||......
T Consensus 152 ~~~~kl~Dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-- 220 (271)
T 3dtc_A 152 NKILKITDFGLAREWHRTT---------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-- 220 (271)
T ss_dssp SCCEEECCCCC----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH--
T ss_pred CcceEEccCCccccccccc---------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--
Confidence 6789999999998665432 224679999977 87 667899999999999999999999999753211
Q ss_pred hHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHh
Q 046036 519 SLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVI 593 (614)
Q Consensus 519 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i 593 (614)
+................ .....+.+++..|++.+|++|||+.|+++.|+++
T Consensus 221 ---------------~~~~~~~~~~~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 221 ---------------AVAYGVAMNKLALPIPS---------TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ---------------HHHHHHHTSCCCCCCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ---------------HHHHhhhcCCCCCCCCc---------ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11111111111111000 1112344677799999999999999999999754
No 179
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=9.1e-21 Score=195.21 Aligned_cols=182 Identities=23% Similarity=0.210 Sum_probs=128.8
Q ss_pred ccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCcccc-CCCCCCcccccccccccceEecCCCccccccchhh
Q 046036 65 LRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIG-KLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESL 143 (614)
Q Consensus 65 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~ 143 (614)
-+.+++++|.++ .+|..+.. .++.|+|++|+|++..+..|. ++++|+.|+ |++|+|++..+..|
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~~--~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~------------L~~N~i~~i~~~~~ 84 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLPS--YTALLDLSHNNLSRLRAEWTPTRLTNLHSLL------------LSHNHLNFISSEAF 84 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCCT--TCSEEECCSSCCCEECTTSSSSCCTTCCEEE------------CCSSCCCEECTTTT
T ss_pred CCEEEeCCCCcC-ccCccCCC--CCCEEECCCCCCCccChhhhhhcccccCEEE------------CCCCcCCccChhhc
Confidence 367899999987 57776643 688899999999877777776 788888777 88888887777778
Q ss_pred hccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchH
Q 046036 144 ENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEH 223 (614)
Q Consensus 144 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 223 (614)
..+++|++|+|++|+|++..+..+..+++|+.|+|++|.|++..+..|..+++|+.|+|++|.|++..+..|..
T Consensus 85 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~------ 158 (361)
T 2xot_A 85 VPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKD------ 158 (361)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC-------
T ss_pred cCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcC------
Confidence 88888888888888888666667778888888888888887766777777777777777777776543333311
Q ss_pred HhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCC--CCEEECcCCcCccc
Q 046036 224 LLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPF--LENLNLSFNNFEGQ 282 (614)
Q Consensus 224 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~ls~N~l~~~ 282 (614)
+..+++|+.|+|++|+|++..+..+..++. ++.|++++|++.+.
T Consensus 159 ---------------~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 159 ---------------GNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp ------------------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred ---------------cccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 034555566666666665444444555554 35666666666643
No 180
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.83 E-value=1.9e-21 Score=197.20 Aligned_cols=165 Identities=20% Similarity=0.303 Sum_probs=119.0
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++|||||++|+|.+++... ..+++..+..++.++ |+|||++.++.+||+|||+
T Consensus 75 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 75 REGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp ECSSEEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ecCCeEEEEEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeec
Confidence 4466789999999999999999753 358899888888887 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCC-CCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VAR-YQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~-~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++.+...... ......+||+.|+| |. ... .+.++||||+||+++||+||+.||............|.....
T Consensus 152 a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 226 (323)
T 3tki_A 152 ATVFRYNNRE-----RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226 (323)
T ss_dssp CEECEETTEE-----CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT
T ss_pred cceeccCCcc-----cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc
Confidence 9876433211 22345789999977 87 333 478899999999999999999999764332222222221110
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
...+. . .....+.++...|++.+|++|||+.|+++
T Consensus 227 ----------------~~~~~--~-------~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 227 ----------------YLNPW--K-------KIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp ----------------TSTTG--G-------GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----------------cCCcc--c-------cCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00000 0 11122345777999999999999999975
No 181
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=2.3e-20 Score=203.83 Aligned_cols=187 Identities=20% Similarity=0.277 Sum_probs=87.4
Q ss_pred CeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEe
Q 046036 14 QNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLG 93 (614)
Q Consensus 14 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 93 (614)
..+.+..+.+.+..+ +..+++|+.|+|++|.+.. +| . +..++ +|+.|+|++|+|++..| +..+++|+.|+
T Consensus 24 ~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~---l~~l~-~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 24 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-G---IQYLP-NVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-T---GGGCT-TCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-H---HccCC-CCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 334444444443322 3344455555555555542 22 1 34444 45555555555543222 44555555555
Q ss_pred ccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCC
Q 046036 94 LDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTL 173 (614)
Q Consensus 94 L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 173 (614)
|++|.+++ +| .+..+++|+.|+ |++|+|++. +.+..+++|+.|+|++|.+++. ..+..+++|
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~------------Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L 155 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLS------------LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKL 155 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEE------------CTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEE------------ecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCC
Confidence 55555542 22 344444444444 555555432 2344555555555555555432 334445555
Q ss_pred CEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCcccc
Q 046036 174 SSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQ 232 (614)
Q Consensus 174 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 232 (614)
+.|+|++|.|++..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++.
T Consensus 156 ~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 156 DTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp SEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred CEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 555555555554333 45555555555555555442 23445555555555555554
No 182
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.83 E-value=4.1e-21 Score=192.00 Aligned_cols=172 Identities=20% Similarity=0.345 Sum_probs=117.5
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 81 ~~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~ 157 (294)
T 4eqm_A 81 EEDDCYYLVMEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGI 157 (294)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeCCeEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCC
Confidence 3456789999999999999999753 358898888888777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++....... .......||+.|+| |. ...++.++||||+||++|||+||+.||......
T Consensus 158 ~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------------- 218 (294)
T 4eqm_A 158 AKALSETSL------TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV------------- 218 (294)
T ss_dssp STTC-------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-------------
T ss_pred ccccccccc------cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-------------
Confidence 987654321 12334679999977 87 667889999999999999999999999753211
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCC-CHHHHHHHHHHhH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERM-GVREMVMEMNVIK 594 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RP-sm~ev~~~L~~i~ 594 (614)
+.....+..... ....... .+....+.++...|++.+|++|| ++.++.+.|+.+.
T Consensus 219 ----~~~~~~~~~~~~---~~~~~~~---~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 219 ----SIAIKHIQDSVP---NVTTDVR---KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp ----HHHHHHHSSCCC---CHHHHSC---TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred ----HHHHHHhhccCC---Ccchhcc---cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 011111111100 0000000 01112344677799999999998 8999998887654
No 183
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.83 E-value=7.7e-21 Score=192.84 Aligned_cols=158 Identities=22% Similarity=0.244 Sum_probs=116.0
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++|||||++|+|.+++... ..+++.....++.++ |+|||++.++.+||+|||++
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a 161 (328)
T 3fe3_A 85 TEKTLYLIMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161 (328)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCC
T ss_pred ECCEEEEEEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCc
Confidence 456789999999999999999753 347888887777776 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCC-CccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARY-QHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~-~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+...... .....+||++|+| |. ...+ +.++||||+||+++||+||+.||+....
T Consensus 162 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------------- 219 (328)
T 3fe3_A 162 NEFTVGG--------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-------------- 219 (328)
T ss_dssp GGGSSSC--------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--------------
T ss_pred eecCCCC--------ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--------------
Confidence 8765432 2345789999977 87 4444 5899999999999999999999975321
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+........... .|.. . ...+.++...|++.+|.+|||++|+++
T Consensus 220 ---~~~~~~i~~~~~~-~p~~---~-------s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 220 ---KELRERVLRGKYR-IPFY---M-------STDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ---HHHHHHHHHCCCC-CCTT---S-------CHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ---HHHHHHHHhCCCC-CCCC---C-------CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1222222222111 1111 1 112335667899999999999999985
No 184
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.83 E-value=3.5e-21 Score=212.25 Aligned_cols=170 Identities=19% Similarity=0.263 Sum_probs=121.6
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
.+..++|||||++|+|.+++... ..++|..+..|+.++ |+|||++.++.+||+|||+++
T Consensus 441 ~~~~~lv~E~~~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~ 517 (635)
T 4fl3_A 441 AESWMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK 517 (635)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHH
T ss_pred cCCEEEEEEccCCCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCcc
Confidence 45578999999999999999753 358999988888877 999999999999999999999
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
.+...... ....+...||+.|+| |. ...++.++|||||||++|||+| |+.||......
T Consensus 518 ~~~~~~~~----~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-------------- 579 (635)
T 4fl3_A 518 ALRADENY----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-------------- 579 (635)
T ss_dssp HTTC-----------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------------
T ss_pred ccccCccc----cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------------
Confidence 77544321 122334567889977 87 6689999999999999999999 99999753221
Q ss_pred ChHHHHHHHHhcCcC-CCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 531 SVMELVYSRLLQGVD-KDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
+.. ..+..... ..+. .+...+.+++..||+.+|++||++.+|+++|+.+....
T Consensus 580 ---~~~-~~i~~~~~~~~p~----------~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 580 ---EVT-AMLEKGERMGCPA----------GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp ---HHH-HHHHTTCCCCCCT----------TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ---HHH-HHHHcCCCCCCCC----------CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 111 11111111 1111 11233456778999999999999999999999876544
No 185
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.83 E-value=6.6e-21 Score=190.92 Aligned_cols=177 Identities=20% Similarity=0.285 Sum_probs=123.0
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ...+++..+..++.++ |+||++++++.+||+|||+
T Consensus 97 ~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 174 (298)
T 3f66_A 97 RSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGL 174 (298)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGG
T ss_pred cCCCceEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccc
Confidence 3456779999999999999999753 3457888888877776 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhC-CCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTG-KRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG-~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++........ .........||+.|+| |. ...++.++||||+||+++||+|| ..||...... ...
T Consensus 175 a~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~------- 242 (298)
T 3f66_A 175 ARDMYDKEYY---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DIT------- 242 (298)
T ss_dssp GCCCSCGGGC---BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THH-------
T ss_pred cccccccchh---ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHH-------
Confidence 9876543211 0112334568889977 76 66789999999999999999995 4455432111 111
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhc
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLG 599 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~ 599 (614)
...........+.. ....+.++...|++.+|++|||+.|+++.|+++...+.+
T Consensus 243 --------~~~~~~~~~~~~~~----------~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 243 --------VYLLQGRRLLQPEY----------CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp --------HHHHTTCCCCCCTT----------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred --------HHHhcCCCCCCCcc----------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 11111111111111 012344677799999999999999999999998876543
No 186
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=5.7e-20 Score=175.22 Aligned_cols=152 Identities=19% Similarity=0.209 Sum_probs=96.9
Q ss_pred cEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCccc
Q 046036 38 TYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLN 117 (614)
Q Consensus 38 ~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 117 (614)
+.+++++|+++ .+|..+ . .+|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 14 ~~v~c~~~~l~-~iP~~l---~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~ 86 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNL---P---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLV 86 (220)
T ss_dssp TEEECTTSCCS-SCCSSC---C---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEE
T ss_pred CEEEcCCCCcC-cCCCcc---C---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEE
Confidence 45666666665 444442 1 2566666666666655555666666666666666666666666666666666555
Q ss_pred ccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCC
Q 046036 118 PLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNT 197 (614)
Q Consensus 118 l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 197 (614)
|++|+|+...+..|..+++|++|+|++|+|++..|..+..+++|+.|+|++|.|++..+..|..+++|
T Consensus 87 ------------Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 154 (220)
T 2v9t_B 87 ------------LYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAI 154 (220)
T ss_dssp ------------CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred ------------CCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCC
Confidence 66666665555556666677777777777666666666666777777777777766555566667777
Q ss_pred ceeccCCccCC
Q 046036 198 QELDFSEHMLS 208 (614)
Q Consensus 198 ~~L~ls~N~l~ 208 (614)
+.|+|++|.+.
T Consensus 155 ~~L~L~~N~~~ 165 (220)
T 2v9t_B 155 QTMHLAQNPFI 165 (220)
T ss_dssp CEEECCSSCEE
T ss_pred CEEEeCCCCcC
Confidence 77777777664
No 187
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.83 E-value=8.3e-21 Score=194.98 Aligned_cols=163 Identities=18% Similarity=0.207 Sum_probs=118.5
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCC----Ceeec
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDM----TAYVG 448 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~----~~kl~ 448 (614)
..++..++||||+++|+|.+++... ..+++.....++.++ |+|||++.++ .+||+
T Consensus 85 ~~~~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~ 161 (361)
T 2yab_A 85 ENRTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (361)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EeCCEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEE
Confidence 3466789999999999999999753 358888888888877 9999998877 79999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
|||+++...... .....+||++|+| |. ...++.++||||+||++|||++|+.||.....
T Consensus 162 DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~---------- 223 (361)
T 2yab_A 162 DFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK---------- 223 (361)
T ss_dssp CCSSCEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH----------
T ss_pred ecCCceEcCCCC--------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH----------
Confidence 999998765432 2344689999977 87 56789999999999999999999999975321
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+...........+.. ....-..+.++...|+..+|++|||+.|+++
T Consensus 224 -------~~~~~~i~~~~~~~~~~~-------~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 224 -------QETLANITAVSYDFDEEF-------FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -------HHHHHHHHTTCCCCCHHH-------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -------HHHHHHHHhcCCCCCchh-------ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111111111110000 0011122345667999999999999999984
No 188
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.83 E-value=9.1e-21 Score=195.88 Aligned_cols=169 Identities=17% Similarity=0.143 Sum_probs=122.4
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceee--CCCCCeeeccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLL--DYDMTAYVGDF 450 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILl--d~~~~~kl~Df 450 (614)
..++..++|||||++|+|.+++... ...+++..+..++.++ |+|||+ +.++.+||+||
T Consensus 156 ~~~~~~~lv~E~~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DF 233 (373)
T 2x4f_A 156 ESKNDIVLVMEYVDGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDF 233 (373)
T ss_dssp ECSSEEEEEEECCTTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCC
T ss_pred EECCEEEEEEeCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeC
Confidence 3466789999999999999998753 3358888888887777 999999 67789999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
|+++....... ....+||++|+| |+ ...++.++|||||||+++||+||+.||.....
T Consensus 234 G~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------------ 293 (373)
T 2x4f_A 234 GLARRYKPREK--------LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND------------ 293 (373)
T ss_dssp SSCEECCTTCB--------CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH------------
T ss_pred CCceecCCccc--------cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------------
Confidence 99987754321 234579999977 87 66789999999999999999999999975321
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH--HHHHh
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM--EMNVI 593 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~--~L~~i 593 (614)
.+.+...+...+...+...+.. -..+.++...|++.+|++|||+.|+++ .+...
T Consensus 294 -----~~~~~~i~~~~~~~~~~~~~~~-------~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 294 -----AETLNNILACRWDLEDEEFQDI-------SEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp -----HHHHHHHHHTCCCSCSGGGTTS-------CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred -----HHHHHHHHhccCCCChhhhccC-------CHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 1122222222222111111111 123446777999999999999999996 45444
No 189
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.83 E-value=1.1e-20 Score=186.34 Aligned_cols=163 Identities=21% Similarity=0.298 Sum_probs=117.9
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------CCceeeCCCCCeeecccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------~~NILld~~~~~kl~DfGla 453 (614)
+..++||||+++|+|.++++... ...+++..+..++.++ |+||+++.++.++++|||++
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~ 160 (271)
T 3kmu_A 82 PHPTLITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVK 160 (271)
T ss_dssp SSCEEEEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSC
T ss_pred CCeEeeecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccce
Confidence 66799999999999999998643 3358999888887766 89999999999999999987
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cC---CCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VA---RYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~---~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
..... ....||+.|+| |. .. .++.++|||||||++|||+||+.||.....
T Consensus 161 ~~~~~------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------------ 216 (271)
T 3kmu_A 161 FSFQS------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------------ 216 (271)
T ss_dssp CTTSC------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------------
T ss_pred eeecc------------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------------
Confidence 54322 23578999977 87 32 233479999999999999999999975321
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKE 595 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~ 595 (614)
.+...........+... ... ...+.++...|++.+|++|||+.|+++.|+++++
T Consensus 217 -----~~~~~~~~~~~~~~~~~--~~~-------~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 217 -----MEIGMKVALEGLRPTIP--PGI-------SPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -----HHHHHHHHHSCCCCCCC--TTC-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -----HHHHHHHHhcCCCCCCC--CCC-------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11111222221111110 011 1234456678999999999999999999998754
No 190
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.83 E-value=2.2e-21 Score=197.11 Aligned_cols=191 Identities=20% Similarity=0.291 Sum_probs=126.4
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.+...++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||++
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 97 GRQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp SSCEEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred CCceEEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccc
Confidence 456688999999999999999753 2358999998888877 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
+........ ........||+.|+| |. ...++.++|||||||+++||+||+.||....... ...+.. ....
T Consensus 175 ~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~--~~~~~~-~~~~ 247 (327)
T 3lxl_A 175 KLLPLDKDY----YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGC-ERDV 247 (327)
T ss_dssp EECCTTCSE----EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH--HHHCC-----C
T ss_pred eecccCCcc----ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh--hhhccc-cccc
Confidence 877543321 112334568888977 87 6678899999999999999999999986422110 000000 0001
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhcc
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLGV 600 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~~ 600 (614)
.....+...+........ .. .....+.+++..|++.+|++|||+.|+++.|+.+.......
T Consensus 248 ~~~~~~~~~~~~~~~~~~--~~-------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 248 PALSRLLELLEEGQRLPA--PP-------ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp CHHHHHHHHHHTTCCCCC--CT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred ccHHHHHHHhhcccCCCC--CC-------cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 111222222222211111 11 11223456778999999999999999999999887655443
No 191
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=5.1e-20 Score=175.55 Aligned_cols=158 Identities=21% Similarity=0.263 Sum_probs=129.6
Q ss_pred CCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEE
Q 046036 13 LQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQL 92 (614)
Q Consensus 13 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 92 (614)
-+.+++++|.++ .+|..+.. .+++|+|++|+|++..|..+ |.+++ +|++|+|++|+|++..+..|..+++|++|
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~~--~~~~L~L~~N~l~~~~~~~~--~~~l~-~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIPQ--YTAELRLNNNEFTVLEATGI--FKKLP-QLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCCT--TCSEEECCSSCCCEECCCCC--GGGCT-TCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCEeEeCCCCcc-cCccCCCC--CCCEEEcCCCcCCccCchhh--hccCC-CCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 358888888888 46766543 46889999999887755432 66776 88899999999887777788888999999
Q ss_pred eccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCC
Q 046036 93 GLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFST 172 (614)
Q Consensus 93 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 172 (614)
+|++|++++..+..|..+++|++|+ |++|+|++..|..|..+++|++|+|++|+|++..|..+..+++
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~------------Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 154 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLM------------LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHS 154 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEE------------CTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTT
T ss_pred ECCCCccCccCHhHhcCCcCCCEEE------------CCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCC
Confidence 9999999887777888888888777 9999998888888888999999999999998877888888889
Q ss_pred CCEEEcCCCCCccCCc
Q 046036 173 LSSIDFAHNNFNGSLP 188 (614)
Q Consensus 173 L~~L~Ls~N~l~~~~~ 188 (614)
|+.|+|++|.+++..+
T Consensus 155 L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 155 LSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCEEECCSCCEECSGG
T ss_pred CCEEEecCcCCcCCCc
Confidence 9999999998876543
No 192
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.83 E-value=6e-21 Score=187.90 Aligned_cols=171 Identities=23% Similarity=0.325 Sum_probs=124.2
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ...+++..+.+++.++ |+||+++.++.+||+|||+
T Consensus 73 ~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~ 150 (267)
T 3t9t_A 73 LEQAPICLVTEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 150 (267)
T ss_dssp CSSSSCEEEECCCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTG
T ss_pred ccCCCeEEEEeCCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccc
Confidence 3456789999999999999999754 2358888888887777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++....... .......|++.|+| |. ...++.++||||||++++||+| |+.||.....
T Consensus 151 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------------- 211 (267)
T 3t9t_A 151 TRFVLDDQY------TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------------- 211 (267)
T ss_dssp GGGBCCHHH------HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------------
T ss_pred ccccccccc------cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-------------
Confidence 987643211 12233567888977 87 5778999999999999999999 8999875321
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
.+.... +.......... .. ...+.+++..|++.+|++|||+.|+++.|+++.+.
T Consensus 212 ----~~~~~~-i~~~~~~~~~~--~~-------~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 212 ----SEVVED-ISTGFRLYKPR--LA-------STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp ----HHHHHH-HHTTCCCCCCT--TS-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ----HHHHHH-HhcCCcCCCCc--cC-------cHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111111 11111110000 01 12344677899999999999999999999998764
No 193
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.83 E-value=2e-20 Score=197.35 Aligned_cols=164 Identities=20% Similarity=0.218 Sum_probs=119.4
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeC---CCCCeeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLD---YDMTAYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld---~~~~~kl~D 449 (614)
..++..++|||||++|+|.+++... ..+++.....++.++ |+|||++ .++.+||+|
T Consensus 80 ~~~~~~~lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~D 156 (444)
T 3soa_A 80 SEEGHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLAD 156 (444)
T ss_dssp ECSSEEEEEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECC
T ss_pred EECCEEEEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEcc
Confidence 4567789999999999999999754 358888888887777 9999998 457899999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
||+++...... .......||++|+| |. ...++.++||||+||++|||++|+.||.....
T Consensus 157 FG~a~~~~~~~-------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~----------- 218 (444)
T 3soa_A 157 FGLAIEVEGEQ-------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ----------- 218 (444)
T ss_dssp CSSCBCCCTTC-------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----------
T ss_pred CceeEEecCCC-------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-----------
Confidence 99998765432 12345789999977 87 55789999999999999999999999965321
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.......+............. ..+.++...|++.+|++|||+.|+++
T Consensus 219 ------~~~~~~i~~~~~~~~~~~~~~~s-------~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 219 ------HRLYQQIKAGAYDFPSPEWDTVT-------PEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp ------HHHHHHHHHTCCCCCTTTTTTSC-------HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ------HHHHHHHHhCCCCCCccccccCC-------HHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 12222222222211111111111 22345667999999999999999986
No 194
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.83 E-value=1.1e-20 Score=190.61 Aligned_cols=172 Identities=24% Similarity=0.310 Sum_probs=117.9
Q ss_pred ceeEEecccCCCchhhhccCCC---CCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 395 FKALAFEFMPNGSLESWLHPNE---ATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 395 ~~~LV~Ey~~~GsL~~~L~~~~---~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
..++||||+++|+|.+++.... ....+++..+.+++.++ |+||+++.++.+||+|||++
T Consensus 115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcc
Confidence 4589999999999999985321 34568999999888887 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+........ .......|++.|+| |. ...++.++|||||||+++||+| |+.||......
T Consensus 195 ~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------------- 256 (313)
T 3brb_A 195 KKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH------------- 256 (313)
T ss_dssp ---------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-------------
T ss_pred eeccccccc-----CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-------------
Confidence 876543221 12234567888976 77 6778999999999999999999 88898753221
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhh
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLL 598 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~ 598 (614)
+..+..........+. .....+.++...|++.+|++|||+.++++.|+.+.+...
T Consensus 257 ----~~~~~~~~~~~~~~~~----------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 257 ----EMYDYLLHGHRLKQPE----------DCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp ----GHHHHHHTTCCCCCBT----------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ----HHHHHHHcCCCCCCCc----------cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1111111111111111 111234567789999999999999999999999877643
No 195
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.82 E-value=5.4e-21 Score=189.85 Aligned_cols=171 Identities=18% Similarity=0.238 Sum_probs=121.1
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
.+..++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+++
T Consensus 84 ~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 84 EEPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred CCCCEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCc
Confidence 34568999999999999999753 2358888888887776 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
....... .......||+.|+| |. ...++.++|||||||+++||+| |+.||....... .....
T Consensus 162 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~------ 227 (281)
T 3cc6_A 162 YIEDEDY------YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVL------ 227 (281)
T ss_dssp CC---------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHH------
T ss_pred ccccccc------cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHH------
Confidence 7654321 12234567889977 87 6778999999999999999999 999997532211 11111
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhh
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLL 598 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~ 598 (614)
......+.+.. ....+.++...|++.+|++|||+.|+++.|+.+.+...
T Consensus 228 ---------~~~~~~~~~~~----------~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 228 ---------EKGDRLPKPDL----------CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp ---------HHTCCCCCCTT----------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ---------hcCCCCCCCCC----------CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 11110011100 11234467779999999999999999999999876543
No 196
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.82 E-value=1.3e-20 Score=191.34 Aligned_cols=163 Identities=17% Similarity=0.193 Sum_probs=118.1
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCC----Ceeec
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDM----TAYVG 448 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~----~~kl~ 448 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+|||++.++ .+||+
T Consensus 84 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 160 (326)
T 2y0a_A 84 ENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKII 160 (326)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred EeCCEEEEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence 3466789999999999999999753 358888888888877 9999999887 79999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
|||+++....... .....||+.|+| |. ...++.++|||||||+++||+||+.||......
T Consensus 161 Dfg~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------- 223 (326)
T 2y0a_A 161 DFGLAHKIDFGNE--------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------- 223 (326)
T ss_dssp CCTTCEECCTTSC--------CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---------
T ss_pred ECCCCeECCCCCc--------cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH---------
Confidence 9999987754321 234679999977 87 567899999999999999999999999753211
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+.+............ . ........+.++...|++.+|++|||+.|+++
T Consensus 224 --------~~~~~~~~~~~~~~~----~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 224 --------ETLANVSAVNYEFED----E---YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp --------HHHHHHHHTCCCCCH----H---HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --------HHHHHHHhcCCCcCc----c---ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111111100000 0 00011123445677999999999999999986
No 197
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.82 E-value=6.8e-21 Score=193.18 Aligned_cols=170 Identities=24% Similarity=0.319 Sum_probs=115.6
Q ss_pred eeEEecccCCCchhhhccCCC---CCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 396 KALAFEFMPNGSLESWLHPNE---ATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 396 ~~LV~Ey~~~GsL~~~L~~~~---~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
.++||||+++|+|.+++.... ....+++..+.+++.++ |+||++++++.+||+|||+++
T Consensus 106 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~ 185 (323)
T 3qup_A 106 PMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185 (323)
T ss_dssp EEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred cEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccc
Confidence 489999999999999996432 22358899988888877 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
........ .......+++.|+| |. ...++.++|||||||+++||+| |+.||......
T Consensus 186 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-------------- 246 (323)
T 3qup_A 186 KIYSGDYY-----RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA-------------- 246 (323)
T ss_dssp --------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------------
T ss_pred cccccccc-----cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--------------
Confidence 76543321 12234567888977 76 6678999999999999999999 89999753221
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
+.............+. .....+.+++..|++.+|++|||+.|+++.|+++....
T Consensus 247 ---~~~~~~~~~~~~~~~~----------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 247 ---EIYNYLIGGNRLKQPP----------ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ---GHHHHHHTTCCCCCCT----------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ---HHHHHHhcCCCCCCCC----------ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111111111111111 11123456778999999999999999999999987654
No 198
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.82 E-value=4.2e-21 Score=194.98 Aligned_cols=184 Identities=20% Similarity=0.312 Sum_probs=127.2
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
+..++||||+++|+|.+++... ...+++..+.+++.++ |+||+++.++.+||+|||+++.
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred CceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 4678999999999999999754 2358898888887777 9999999999999999999987
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCCC-
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPES- 531 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~~- 531 (614)
....... ........|+..|+| |. ...++.++|||||||+++||+||+.|+..... .+........
T Consensus 195 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~------~~~~~~~~~~~ 264 (326)
T 2w1i_A 195 LPQDKEY----YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQ 264 (326)
T ss_dssp CCSSCSE----EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH------HHHHHHCTTCC
T ss_pred ccccccc----cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH------HHHHhhccccc
Confidence 7544221 011223457778966 87 56788999999999999999999999764211 1111111110
Q ss_pred ---hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhh
Q 046036 532 ---VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLL 598 (614)
Q Consensus 532 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~ 598 (614)
....+...+......... . .....+.+++..|++.+|++|||+.||++.|+++++++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 265 GQMIVFHLIELLKNNGRLPRP--D-------GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp THHHHHHHHHHHHTTCCCCCC--T-------TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHhhcCCCCCCC--C-------cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111122222222111100 0 112345567789999999999999999999999998764
No 199
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.82 E-value=4.4e-21 Score=192.56 Aligned_cols=180 Identities=22% Similarity=0.346 Sum_probs=125.4
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
...++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+++.
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred ceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccccc
Confidence 5578999999999999999643 2358888888888877 9999999999999999999987
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC--
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE-- 530 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~-- 530 (614)
....... ........||..|+| |. ...++.++||||+||+++||+||+.|+.... ..+.....+.
T Consensus 176 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~ 245 (302)
T 4e5w_A 176 IETDKEY----YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLKMIGPTHG 245 (302)
T ss_dssp CCTTCCE----EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHHHHCSCCG
T ss_pred ccCCCcc----eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhhccCCccc
Confidence 7654321 112334678888976 86 6678899999999999999999999865321 1111111111
Q ss_pred -ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhH
Q 046036 531 -SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIK 594 (614)
Q Consensus 531 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~ 594 (614)
.....+...+......... + .....+.+++..|++.+|++|||+.|+++.|+.+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~--~-------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 246 QMTVTRLVNTLKEGKRLPCP--P-------NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp GGHHHHHHHHHHTTCCCCCC--T-------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHhccCCCCCC--C-------CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1122222233222211110 1 11123456778999999999999999999998764
No 200
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.82 E-value=9.3e-21 Score=188.79 Aligned_cols=173 Identities=20% Similarity=0.252 Sum_probs=126.6
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++.... ...+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 79 ~~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 79 TREPPFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157 (288)
T ss_dssp CSSSSEEEEEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred ccCCCEEEEEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCcc
Confidence 44567899999999999999997542 3458898888887776 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++....... .......||+.|+| |. ...++.++||||+||+++||++ |+.||...... ....
T Consensus 158 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~------ 223 (288)
T 3kfa_A 158 SRLMTGDTY------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYE------ 223 (288)
T ss_dssp GGTSCSSSS------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH------
T ss_pred ceeccCCcc------ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH------
Confidence 987654321 22334567888977 87 6778999999999999999999 99998753211 1111
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
.+......... . .....+.++...|++.+|++|||+.|+++.|+.+.+..
T Consensus 224 ----------~~~~~~~~~~~--~-------~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 224 ----------LLEKDYRMERP--E-------GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp ----------HHHTTCCCCCC--T-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----------HHhccCCCCCC--C-------CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 11111111000 0 11123446777999999999999999999999887654
No 201
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.82 E-value=2.5e-20 Score=193.23 Aligned_cols=164 Identities=16% Similarity=0.173 Sum_probs=119.1
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCC--CCCeeeccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDY--DMTAYVGDF 450 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~--~~~~kl~Df 450 (614)
..++..++|||||++|+|.+++... ...+++..+..++.++ |+|||++. ++.+||+||
T Consensus 118 ~~~~~~~lv~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DF 195 (387)
T 1kob_A 118 EDKYEMVLILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDF 195 (387)
T ss_dssp ECSSEEEEEEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCC
T ss_pred EeCCEEEEEEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEec
Confidence 3456789999999999999999753 2358898888888877 99999984 477999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
|+++...... ......||+.|+| |. ...++.++|||||||++|||+||+.||.....
T Consensus 196 G~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------------ 255 (387)
T 1kob_A 196 GLATKLNPDE--------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------------ 255 (387)
T ss_dssp TTCEECCTTS--------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------------
T ss_pred ccceecCCCc--------ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH------------
Confidence 9998775432 2334679999977 87 56789999999999999999999999975321
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+.......+...+...... -..+.++...|++.+|++|||+.|+++
T Consensus 256 -----~~~~~~i~~~~~~~~~~~~~~~-------s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 256 -----LETLQNVKRCDWEFDEDAFSSV-------SPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp -----HHHHHHHHHCCCCCCSSTTTTS-------CHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred -----HHHHHHHHhCCCCCCccccccC-------CHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 1111111111111111111111 123446777999999999999999986
No 202
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.82 E-value=1e-20 Score=187.67 Aligned_cols=172 Identities=25% Similarity=0.340 Sum_probs=124.5
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
.+..++||||+++|+|.+++.... ...+++..+.+++.++ |+||++++++.+||+|||+++
T Consensus 79 ~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 79 QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp SSSCEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCCcEEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccc
Confidence 345789999999999999997531 2358899888888877 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
....... .......|++.|+| |. ...++.++|||||||+++||+| |+.||......
T Consensus 158 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-------------- 217 (279)
T 1qpc_A 158 LIEDNEY------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-------------- 217 (279)
T ss_dssp ECSSSCE------ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------------
T ss_pred cccCccc------ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------------
Confidence 7754321 12233557888977 87 5778999999999999999999 89998753211
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhh
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLL 598 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~ 598 (614)
+... .+.......... .....+.++...|++.+|++|||+.++++.|+.+.....
T Consensus 218 ---~~~~-~~~~~~~~~~~~---------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 218 ---EVIQ-NLERGYRMVRPD---------NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp ---HHHH-HHHTTCCCCCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ---HHHH-HHhcccCCCCcc---------cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 1111 111111100000 111234467779999999999999999999998876543
No 203
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=1.5e-20 Score=205.30 Aligned_cols=191 Identities=22% Similarity=0.292 Sum_probs=115.4
Q ss_pred CCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCc
Q 046036 36 KLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQK 115 (614)
Q Consensus 36 ~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 115 (614)
.+..++++.+.+....+ +..++ +|+.|+|++|.+. .+| .+..+++|+.|+|++|++++..| +..+++|+.
T Consensus 22 ~l~~l~l~~~~i~~~~~-----~~~L~-~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~ 91 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT-----QNELN-SIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGW 91 (605)
T ss_dssp HHHHHHTTCSCTTSEEC-----HHHHT-TCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCE
T ss_pred HHHHHhccCCCcccccc-----hhcCC-CCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCE
Confidence 44555566666554332 34555 6667777777765 333 46667777777777777765443 566666665
Q ss_pred ccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCC
Q 046036 116 LNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLS 195 (614)
Q Consensus 116 L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 195 (614)
|+ |++|.|++ ++ .+..+++|+.|+|++|.+.+ + ..+..+++|+.|+|++|.|++. ..+..++
T Consensus 92 L~------------Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~ 153 (605)
T 1m9s_A 92 LF------------LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLT 153 (605)
T ss_dssp EE------------CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCT
T ss_pred EE------------CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccC
Confidence 55 66666663 22 56666666666666666663 2 2355666666666666666643 4566666
Q ss_pred CCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCccc
Q 046036 196 NTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGT 258 (614)
Q Consensus 196 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 258 (614)
+|+.|+|++|.+++..| +..+++|+.|+|++|.|++. +.+..+++|+.|+|++|++++.
T Consensus 154 ~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 154 KLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 66666666666665544 56666666666666666542 2456666666666666666543
No 204
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.82 E-value=2.1e-20 Score=191.49 Aligned_cols=164 Identities=18% Similarity=0.176 Sum_probs=108.9
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCC---CCCeeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDY---DMTAYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~---~~~~kl~D 449 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+|||++. ++.+||+|
T Consensus 118 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~D 194 (349)
T 2w4o_A 118 ETPTEISLVLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIAD 194 (349)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred ecCCeEEEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEcc
Confidence 3456789999999999999999754 358888888888777 99999975 88999999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
||+++...... ......||++|+| |+ ...++.++|||||||++|||+||+.||.......
T Consensus 195 fg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--------- 257 (349)
T 2w4o_A 195 FGLSKIVEHQV--------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ--------- 257 (349)
T ss_dssp CC------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH---------
T ss_pred CccccccCccc--------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH---------
Confidence 99998765432 1334679999977 87 5678999999999999999999999997532211
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
................... +....+.++...|++.+|++|||+.|+++
T Consensus 258 -------~~~~~i~~~~~~~~~~~~~-------~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 258 -------FMFRRILNCEYYFISPWWD-------EVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -------HHHHHHHTTCCCCCTTTTT-------TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -------HHHHHHHhCCCccCCchhh-------hCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111111111000000 11123446777999999999999999986
No 205
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.82 E-value=2.2e-20 Score=192.25 Aligned_cols=163 Identities=20% Similarity=0.236 Sum_probs=117.3
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCC---Ceeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDM---TAYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~---~~kl~D 449 (614)
..++..++|||||++|+|.+++... ..+++.....++.++ |+|||++.+. .+||+|
T Consensus 98 ~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 174 (362)
T 2bdw_A 98 QEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 174 (362)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECC
T ss_pred EeCCEEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEee
Confidence 4567789999999999999999754 358888888887777 9999998654 599999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
||+++...... .....+||++|+| |. ...++.++|||||||++|||+||+.||.....
T Consensus 175 fG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~----------- 235 (362)
T 2bdw_A 175 FGLAIEVNDSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----------- 235 (362)
T ss_dssp CTTCBCCTTCC--------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------
T ss_pred cCcceEecCCc--------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----------
Confidence 99998765432 2334689999977 87 55789999999999999999999999975321
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.................... ...+.++...|++.+|++||++.|+++
T Consensus 236 ------~~~~~~i~~~~~~~~~~~~~~~-------~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 236 ------HRLYAQIKAGAYDYPSPEWDTV-------TPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp ------HHHHHHHHHTCCCCCTTGGGGS-------CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ------HHHHHHHHhCCCCCCcccccCC-------CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111111122111111111111 123345677999999999999999885
No 206
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.82 E-value=2.3e-20 Score=189.96 Aligned_cols=160 Identities=19% Similarity=0.241 Sum_probs=116.5
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
...+..++||||+++|+|.+++... ..+++.....++.++ |+|||++.++.+||+|||+
T Consensus 75 ~~~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~ 151 (337)
T 1o6l_A 75 QTHDRLCFVMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151 (337)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccc
Confidence 3456789999999999999999743 357888777777666 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++...... ......+||+.|+| |. ...++.++||||+||++|||++|+.||.....
T Consensus 152 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------------- 210 (337)
T 1o6l_A 152 CKEGISDG-------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------------- 210 (337)
T ss_dssp CBCSCCTT-------CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------------
T ss_pred hhhcccCC-------CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--------------
Confidence 98643322 12445789999977 87 66789999999999999999999999975211
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCC-----CHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERM-----GVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RP-----sm~ev~~ 588 (614)
.+.....+..... .|. ... . .+.++...|++.+|++|| ++.|+++
T Consensus 211 ---~~~~~~i~~~~~~-~p~---~~s----~---~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 211 ---ERLFELILMEEIR-FPR---TLS----P---EAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ---HHHHHHHHHCCCC-CCT---TSC----H---HHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---HHHHHHHHcCCCC-CCC---CCC----H---HHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 1112222222111 111 111 1 233566689999999999 8888875
No 207
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.82 E-value=7.7e-21 Score=194.72 Aligned_cols=160 Identities=25% Similarity=0.293 Sum_probs=113.4
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++|||||++|+|.+++... ..+++.....++.++ |+|||++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~ 170 (353)
T 3txo_A 94 QTPDRLFFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM 170 (353)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccc
Confidence 3466789999999999999999753 358888888877776 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++...... ......+||+.|+| |. ...++.++||||+||++|||+||+.||.....
T Consensus 171 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------------- 229 (353)
T 3txo_A 171 CKEGICNG-------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-------------- 229 (353)
T ss_dssp CBCSCC----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--------------
T ss_pred eeecccCC-------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--------------
Confidence 98643322 22445789999977 87 56789999999999999999999999975321
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCH------HHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGV------REMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm------~ev~~ 588 (614)
.+.....+...... |.. .. + .+.++...|++.+|++||++ .|+++
T Consensus 230 ---~~~~~~i~~~~~~~-p~~---~~----~---~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 230 ---DDLFEAILNDEVVY-PTW---LH----E---DATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ---HHHHHHHHHCCCCC-CTT---SC----H---HHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ---HHHHHHHHcCCCCC-CCC---CC----H---HHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 12222222222111 110 11 1 23356678999999999998 66664
No 208
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.82 E-value=1.5e-20 Score=190.40 Aligned_cols=190 Identities=20% Similarity=0.190 Sum_probs=124.9
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceee----CCCCCeeeccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLL----DYDMTAYVGDF 450 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILl----d~~~~~kl~Df 450 (614)
....++||||+++|+|.+++........+++..+..++.++ |+||++ +.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Df 160 (319)
T 4euu_A 81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (319)
T ss_dssp TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCC
T ss_pred CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccC
Confidence 34679999999999999999865434458999999888887 999999 88888999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc----------cCCCCccCceeehhHHHHHHHhCCCCCCcccccCc-
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW----------VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCL- 518 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~----------~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~- 518 (614)
|+++....... .....||+.|+| |. ...++.++|||||||++|||+||+.||........
T Consensus 161 g~a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 232 (319)
T 4euu_A 161 GAARELEDDEQ--------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (319)
T ss_dssp TTCEECCTTCC--------BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC
T ss_pred CCceecCCCCc--------eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh
Confidence 99987755422 334679999977 76 25788999999999999999999999975322111
Q ss_pred -hHHHHHHhhCCCChHHHHHHHHhcC--cCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHh
Q 046036 519 -SLHNFCEMALPESVMELVYSRLLQG--VDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVI 593 (614)
Q Consensus 519 -~l~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i 593 (614)
....-.....|......+......+ +............ ..-..+..+...|++.||++|||++|+++.....
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSR---GLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCH---HHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccch---hHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 1111111111110000000000000 0000001111112 2233345677799999999999999999988743
No 209
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.82 E-value=6.6e-21 Score=192.16 Aligned_cols=158 Identities=18% Similarity=0.169 Sum_probs=113.7
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||| +|+|.+++... ...++|..+..|+.++ |+|||++.++.+||+|||+
T Consensus 127 ~~~~~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~ 203 (311)
T 3p1a_A 127 EEGGILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203 (311)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTT
T ss_pred EeCCEEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEcccee
Confidence 3466789999999 66999998753 2359999999988887 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
++...... ......||++|+| |+ .+.++.++|||||||++|||++|+.|+..... ...... .
T Consensus 204 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~----~~~~~~----~ 267 (311)
T 3p1a_A 204 LVELGTAG--------AGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG----WQQLRQ----G 267 (311)
T ss_dssp CEECC--------------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----HHHHTT----T
T ss_pred eeecccCC--------CCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHHhc----c
Confidence 98765432 2334679999977 87 66899999999999999999999777643110 000000 0
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.... .+. ......+.++...|++.+|++|||++|+++
T Consensus 268 ~~~~----~~~-----------------~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 268 YLPP----EFT-----------------AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp CCCH----HHH-----------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCc----ccc-----------------cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0000 000 011223456777999999999999999985
No 210
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.82 E-value=1.6e-20 Score=189.27 Aligned_cols=176 Identities=18% Similarity=0.194 Sum_probs=114.8
Q ss_pred CCCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
.++..++||||+++|+|.+++.... ....+++..+.+++.++ |+||+++.++.+||+|||+
T Consensus 103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~ 182 (310)
T 2wqm_A 103 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL 182 (310)
T ss_dssp ETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC--
T ss_pred cCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccc
Confidence 3567899999999999999986421 23458888888877776 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++....... ......||+.|+| |. ...++.++|||||||+++||++|+.||.......
T Consensus 183 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------------ 243 (310)
T 2wqm_A 183 GRFFSSKTT-------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL------------ 243 (310)
T ss_dssp -----------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH------------
T ss_pred eeeecCCCc-------cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH------------
Confidence 987654321 2334678999977 87 6678999999999999999999999997532111
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhh
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLL 598 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~ 598 (614)
.+.............+. .. ....+.++...|++.+|++|||+.||++.|++++....
T Consensus 244 ---~~~~~~~~~~~~~~~~~--~~-------~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 244 ---YSLCKKIEQCDYPPLPS--DH-------YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp ---HHHHHHHHTTCSCCCCT--TT-------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHhhcccCCCCcc--cc-------cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 11111111111111000 00 11234467779999999999999999999999987643
No 211
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.82 E-value=6.9e-21 Score=188.75 Aligned_cols=167 Identities=25% Similarity=0.307 Sum_probs=115.4
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
++..++||||+++|+|.+++.... ...+++..+.+++.++ |+||+++.++.+||+|||+++
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~ 165 (278)
T 1byg_A 87 KGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 165 (278)
T ss_dssp --CCEEEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred CCceEEEEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccc
Confidence 446799999999999999997532 2247888888877776 999999999999999999997
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
..... .....+++.|+| |. ...++.++||||||++++||+| |+.||...... ..
T Consensus 166 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~---------- 223 (278)
T 1byg_A 166 EASST----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DV---------- 223 (278)
T ss_dssp --------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GH----------
T ss_pred ccccc----------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HH----------
Confidence 65432 123467888977 87 6678999999999999999999 99998753211 11
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
. ..+.......... .....+.++...|++.+|++|||+.|+++.|++++...
T Consensus 224 -----~-~~~~~~~~~~~~~---------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 224 -----V-PRVEKGYKMDAPD---------GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp -----H-HHHTTTCCCCCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----H-HHHhcCCCCCCcc---------cCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 1 1111111111000 11123445677999999999999999999999998754
No 212
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.82 E-value=2.7e-20 Score=185.38 Aligned_cols=162 Identities=23% Similarity=0.351 Sum_probs=115.8
Q ss_pred eeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------CCceeeCCCCC-----eeeccc
Q 046036 396 KALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------PSNVLLDYDMT-----AYVGDF 450 (614)
Q Consensus 396 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------~~NILld~~~~-----~kl~Df 450 (614)
.++||||+++|+|.+++... ...++|..+..++.++ |+||+++.++. +||+||
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 96 PRMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp TEEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred CeEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 37999999999999998754 3468888888877665 89999988776 999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc----cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW----VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~----~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
|+++..... .....||+.|+| |. ...++.++||||+||++|||++|+.||...........
T Consensus 174 g~~~~~~~~----------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~---- 239 (287)
T 4f0f_A 174 GLSQQSVHS----------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI---- 239 (287)
T ss_dssp TTCBCCSSC----------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHH----
T ss_pred Ccccccccc----------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHH----
Confidence 999754332 334679999976 86 34568899999999999999999999975332211111
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHh
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVI 593 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i 593 (614)
............. . .....+.++...|++.+|++|||+.|+++.|+++
T Consensus 240 -----------~~~~~~~~~~~~~--~-------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 240 -----------NMIREEGLRPTIP--E-------DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -----------HHHHHSCCCCCCC--T-------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -----------HHHhccCCCCCCC--c-------ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1111111111000 0 1112344677799999999999999999999753
No 213
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.82 E-value=2.4e-20 Score=186.72 Aligned_cols=179 Identities=22% Similarity=0.307 Sum_probs=125.6
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
+...++||||+.+|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+++
T Consensus 95 ~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 172 (298)
T 3pls_A 95 EGLPHVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172 (298)
T ss_dssp SSCCEEEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSC
T ss_pred CCCcEEEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcc
Confidence 33458999999999999999763 3457888888887776 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
........ .........||+.|+| |. ...++.++|||||||+++||+||..|+..... ...+.....
T Consensus 173 ~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~------ 242 (298)
T 3pls_A 173 DILDREYY---SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLA------ 242 (298)
T ss_dssp TTTTGGGG---CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHH------
T ss_pred cccCCccc---ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhh------
Confidence 66433210 0112334678899977 77 66789999999999999999996666433211 111111111
Q ss_pred hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhcccc
Q 046036 532 VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLGVRI 602 (614)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~~~~ 602 (614)
.......+.. ....+.++...|++.+|++|||+.|+++.|+++...+.+...
T Consensus 243 ---------~~~~~~~~~~----------~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~~ 294 (298)
T 3pls_A 243 ---------QGRRLPQPEY----------CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDHY 294 (298)
T ss_dssp ---------TTCCCCCCTT----------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCCB
T ss_pred ---------cCCCCCCCcc----------chHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccch
Confidence 1110011110 112344677799999999999999999999999888766543
No 214
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.82 E-value=1e-20 Score=188.81 Aligned_cols=175 Identities=18% Similarity=0.250 Sum_probs=124.8
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
.+..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+||+|||+++
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CCCcEEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 45678999999999999999753 358888888888777 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
........ ........|++.|+| |. ...++.++|||||||+++||+| |+.||...... .+
T Consensus 166 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~---------- 229 (291)
T 1xbb_A 166 ALRADENY----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EV---------- 229 (291)
T ss_dssp ECCTTCSE----EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HH----------
T ss_pred eeccCCCc----ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HH----------
Confidence 76543221 111223456788977 87 5678899999999999999999 99999753211 11
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhccc
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLGVR 601 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~~~ 601 (614)
...+........ .. .....+.+++..|++.+|++||++.||++.|+.+-....+.+
T Consensus 230 ------~~~~~~~~~~~~--~~-------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 285 (291)
T 1xbb_A 230 ------TAMLEKGERMGC--PA-------GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 285 (291)
T ss_dssp ------HHHHHTTCCCCC--CT-------TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHcCCCCCC--CC-------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence 111111110000 00 111234467789999999999999999999999876655443
No 215
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.82 E-value=8.6e-21 Score=192.70 Aligned_cols=168 Identities=23% Similarity=0.301 Sum_probs=116.3
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
+..++||||+++|+|.+++... ...+++..+..++.++ |+|||++.++.+||+|||+++.
T Consensus 89 ~~~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 89 STVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SSEEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred CCceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 3478999999999999999764 2358888888888777 9999999999999999999987
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCCC
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
....... .......||+.|+| |. ...++.++|||||||++|||+| |+.||....... +..
T Consensus 167 ~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~--------- 230 (327)
T 3lzb_A 167 LGAEEKE-----YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISS--------- 230 (327)
T ss_dssp ------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHH---------
T ss_pred ccCcccc-----ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHH---------
Confidence 6543321 22334567888977 77 6778999999999999999999 999997532211 111
Q ss_pred hHHHHHHHHhcCc-CCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 532 VMELVYSRLLQGV-DKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 532 ~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
.+.... .+.+. . ....+.+++..|++.+|++||++.|+++.|+++...
T Consensus 231 -------~~~~~~~~~~~~---~-------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 231 -------ILEKGERLPQPP---I-------CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -------HHHTTCCCCCCT---T-------BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -------HHHcCCCCCCCc---c-------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 111111 01111 0 111344677799999999999999999999988744
No 216
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.82 E-value=1.1e-20 Score=187.77 Aligned_cols=163 Identities=23% Similarity=0.362 Sum_probs=121.1
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
....++||||+++|+|.+++.... ...+++..+..++.++ |+||++++++.+||+|||+++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 170 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhhe
Confidence 456799999999999999997532 3468898888888777 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
....... .....||+.|+| |. ...++.++|||||||+++||+||..|+....
T Consensus 171 ~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----------------- 225 (284)
T 2a19_B 171 SLKNDGK--------RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----------------- 225 (284)
T ss_dssp ESSCCSC--------CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-----------------
T ss_pred ecccccc--------ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-----------------
Confidence 7654321 234579999977 87 6678999999999999999999998864210
Q ss_pred hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 532 VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
+... .+....... .. .. .+.++...|++.+|++|||+.|+++.|..++..
T Consensus 226 --~~~~-~~~~~~~~~-----~~----~~---~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 226 --KFFT-DLRDGIISD-----IF----DK---KEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp --HHHH-HHHTTCCCT-----TS----CH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred --HHHH-Hhhcccccc-----cC----CH---HHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 0011 111110000 00 11 233566799999999999999999999887644
No 217
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.82 E-value=1.1e-20 Score=190.58 Aligned_cols=186 Identities=20% Similarity=0.202 Sum_probs=119.2
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++|||||++ +|.+++... ...+++..+..++.++ |+|||++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 165 (311)
T 3niz_A 89 HSERCLTLVFEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL 165 (311)
T ss_dssp CCSSCEEEEEECCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ccCCEEEEEEcCCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcC
Confidence 456678999999995 888888754 2358888888877777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh-
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA- 527 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~- 527 (614)
++....... ......||+.|+| |. ...++.++||||+||+++||+||+.||........ +.......
T Consensus 166 a~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~ 237 (311)
T 3niz_A 166 ARAFGIPVR-------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSILG 237 (311)
T ss_dssp CEETTSCCC----------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHHHC
T ss_pred ceecCCCcc-------cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHHC
Confidence 987654321 2344678999977 86 35689999999999999999999999976433221 22211111
Q ss_pred --CCCChHHHHH-HHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 528 --LPESVMELVY-SRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 528 --~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.......+ +.+........ ....+..........+.++...|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 238 TPNPREWPQVQELPLWKQRTFQVF-EKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCTTTSGGGTTSHHHHSCCCCCC-CCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCChHHhhhhhccchhhhcccccc-cCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111110000 00000000000 000011111111234456778999999999999999985
No 218
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.82 E-value=1.8e-20 Score=193.24 Aligned_cols=162 Identities=21% Similarity=0.262 Sum_probs=116.7
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
...+..|+|||||++|+|.+++... ..+++.....++.++ |+|||++.++.+||+|||+
T Consensus 109 ~~~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~ 185 (373)
T 2r5t_A 109 QTADKLYFVLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL 185 (373)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCB
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcc
Confidence 3467789999999999999999753 347777777776666 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++...... ......+||+.|+| |. ...++.++|||||||++|||++|+.||.....
T Consensus 186 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-------------- 244 (373)
T 2r5t_A 186 CKENIEHN-------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-------------- 244 (373)
T ss_dssp CGGGBCCC-------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--------------
T ss_pred ccccccCC-------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------------
Confidence 98643322 12445789999977 87 66789999999999999999999999975321
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEM 590 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L 590 (614)
.+.....+.......+ ... . .+.++...|++.+|++||++.+.+..+
T Consensus 245 ---~~~~~~i~~~~~~~~~----~~~----~---~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 245 ---AEMYDNILNKPLQLKP----NIT----N---SARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp ---HHHHHHHHHSCCCCCS----SSC----H---HHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred ---HHHHHHHHhcccCCCC----CCC----H---HHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 1222222322221111 111 1 233466689999999999986544433
No 219
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.82 E-value=2.5e-20 Score=189.33 Aligned_cols=165 Identities=17% Similarity=0.172 Sum_probs=115.8
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCC---CCCeeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDY---DMTAYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~---~~~~kl~D 449 (614)
...+..++||||+++|+|.+++... ....+++..+..++.++ |+||+++. ++.+||+|
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEee
Confidence 4566789999999999999999754 23468999888888877 99999998 78999999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
||+++...... ......||+.|+| |. ...++.++||||+||+++||+||+.||......
T Consensus 178 fg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------- 239 (327)
T 3lm5_A 178 FGMSRKIGHAC--------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ---------- 239 (327)
T ss_dssp GGGCEEC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----------
T ss_pred CccccccCCcc--------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch----------
Confidence 99998765432 1334679999977 87 677899999999999999999999999753211
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+................... ....+.++...|++.+|++|||++|+++
T Consensus 240 -------~~~~~i~~~~~~~~~~~~~~-------~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 240 -------ETYLNISQVNVDYSEETFSS-------VSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp -------HHHHHHHHTCCCCCTTTTTT-------SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -------HHHHHHHhcccccCchhhcc-------cCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 11111111111111111011 1123445677999999999999999975
No 220
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.81 E-value=2.7e-20 Score=190.58 Aligned_cols=112 Identities=21% Similarity=0.322 Sum_probs=93.6
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
...+..++||||+++|+|.+++... ..+++.....++.++ |+|||+|.++.+||+|||+
T Consensus 91 ~~~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~ 167 (353)
T 2i0e_A 91 QTMDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 167 (353)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCc
Confidence 3456789999999999999999753 358888888887777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCc
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDE 512 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~ 512 (614)
++...... ......+||+.|+| |. ...++.++||||+||++|||++|+.||..
T Consensus 168 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 223 (353)
T 2i0e_A 168 CKENIWDG-------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223 (353)
T ss_dssp CBCCCCTT-------CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccccCC-------cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence 98643322 12345789999977 87 66789999999999999999999999975
No 221
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.81 E-value=5e-21 Score=207.37 Aligned_cols=166 Identities=26% Similarity=0.355 Sum_probs=122.1
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
+..++|||||++|+|.++|+... ...+++..+.+|+.++ |+|||+++++.+||+|||+++.
T Consensus 334 ~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 412 (535)
T 2h8h_A 334 EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL 412 (535)
T ss_dssp SSCEEEECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTT
T ss_pred ccceEeeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEccccccee
Confidence 56799999999999999997431 2358898888888877 9999999999999999999987
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCCC
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
...... .......++..|+| |. ...++.++|||||||++|||+| |+.||.....
T Consensus 413 ~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~---------------- 470 (535)
T 2h8h_A 413 IEDNEY------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------------- 470 (535)
T ss_dssp CCCHHH------HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH----------------
T ss_pred cCCCce------ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----------------
Confidence 653211 11223457788977 87 6789999999999999999999 9999975321
Q ss_pred hHHHHHHHHhcCcC-CCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhH
Q 046036 532 VMELVYSRLLQGVD-KDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIK 594 (614)
Q Consensus 532 ~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~ 594 (614)
.++++. +..... ..+. .+...+.+++..||+.+|++|||+.+|++.|+.+.
T Consensus 471 -~~~~~~-i~~~~~~~~~~----------~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 471 -REVLDQ-VERGYRMPCPP----------ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp -HHHHHH-HHTTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred -HHHHHH-HHcCCCCCCCC----------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 111111 111111 1111 11223456778999999999999999999998764
No 222
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.81 E-value=1.3e-20 Score=192.26 Aligned_cols=159 Identities=22% Similarity=0.340 Sum_probs=115.4
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+|||++.++.+||+|||+
T Consensus 88 ~~~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~ 164 (345)
T 1xjd_A 88 QTKENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM 164 (345)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChh
Confidence 3466789999999999999999753 358888888887777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++...... ......+||+.|+| |. ...++.++||||+||++|||++|+.||.....
T Consensus 165 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------------- 223 (345)
T 1xjd_A 165 CKENMLGD-------AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-------------- 223 (345)
T ss_dssp CBCCCCTT-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------------
T ss_pred hhhcccCC-------CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--------------
Confidence 98654322 12445789999977 87 66789999999999999999999999975321
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHH-HHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVR-EMV 587 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~-ev~ 587 (614)
.+.......... ..|. ... ..+.++...|++.+|++||++. |+.
T Consensus 224 ---~~~~~~i~~~~~-~~p~---~~s-------~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 224 ---EELFHSIRMDNP-FYPR---WLE-------KEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ---HHHHHHHHHCCC-CCCT---TSC-------HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ---HHHHHHHHhCCC-CCCc---ccC-------HHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 111111111111 0110 011 1233566789999999999987 554
No 223
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=3.1e-19 Score=171.26 Aligned_cols=132 Identities=22% Similarity=0.224 Sum_probs=69.2
Q ss_pred cccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhh
Q 046036 64 KLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESL 143 (614)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~ 143 (614)
+|++|+|++|++++..|..|..+++|++|+|++|+++...+..|..+++|+.|+ |++|+|++..+..|
T Consensus 41 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~------------Ls~N~l~~l~~~~~ 108 (229)
T 3e6j_A 41 NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD------------LGTNQLTVLPSAVF 108 (229)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE------------CCSSCCCCCCTTTT
T ss_pred CCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE------------CCCCcCCccChhHh
Confidence 455555555555544444455555555555555555433334445555555444 55555554444445
Q ss_pred hccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCC
Q 046036 144 ENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLS 208 (614)
Q Consensus 144 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 208 (614)
..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|.+.
T Consensus 109 ~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 109 DRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp TTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 55555555555555555 44555555555555555555555444444555555555555555554
No 224
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.3e-19 Score=173.83 Aligned_cols=154 Identities=17% Similarity=0.186 Sum_probs=113.7
Q ss_pred eEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCcc
Q 046036 127 QLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHM 206 (614)
Q Consensus 127 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~ 206 (614)
.++.++++++ .+|..+. ++|++|+|++|+|++..|..+..+++|++|+|++|.|+...+..|..+++|+.|+|++|.
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 3446666665 3443332 667777777777776666666677777777777777765555556777777777777777
Q ss_pred CCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCC
Q 046036 207 LSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLP 284 (614)
Q Consensus 207 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 284 (614)
+++..+..|..+++|+.|+|++|.|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|++++..+
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 77666666777777888888888887 677778888999999999999997777788889999999999999987765
No 225
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.81 E-value=8.8e-21 Score=192.23 Aligned_cols=173 Identities=18% Similarity=0.252 Sum_probs=123.3
Q ss_pred CCCCceeEEecccCCCchhhhccCCC-------CCcccCHHHHHHHHhhC------------------CCceeeCCCCCe
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNE-------ATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTA 445 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~-------~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~ 445 (614)
..++..++||||+++|+|.+++.... ....+++..+.+++.++ |+||+++.++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCE
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeE
Confidence 34567899999999999999997432 11356888888887777 999999999999
Q ss_pred eecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHH
Q 046036 446 YVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLH 521 (614)
Q Consensus 446 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~ 521 (614)
||+|||+++........ .......||+.|+| |. ...++.++|||||||+++||+| |+.||.....
T Consensus 178 kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------ 246 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------ 246 (322)
T ss_dssp EECCTTCCCGGGGGGCE-----EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH------
T ss_pred EECcCcccccccccccc-----ccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH------
Confidence 99999999866443211 12233567889977 87 6678999999999999999999 8889865321
Q ss_pred HHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHH
Q 046036 522 NFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKE 595 (614)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~ 595 (614)
.+.............+. .....+.++...|++.+|++|||+.|+++.|+++..
T Consensus 247 -----------~~~~~~~~~~~~~~~~~----------~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 247 -----------EQVLRFVMEGGLLDKPD----------NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp -----------HHHHHHHHTTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred -----------HHHHHHHHcCCcCCCCC----------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11111111111111111 111234457779999999999999999999987643
No 226
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.81 E-value=3.1e-20 Score=186.00 Aligned_cols=159 Identities=19% Similarity=0.227 Sum_probs=113.8
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
++..++||||+++|+|.+++.. ..+++..+..++.++ |+||+++.++.+||+|||+++
T Consensus 110 ~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 185 (298)
T 2zv2_A 110 EDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSN 185 (298)
T ss_dssp SSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCcc
Confidence 5678999999999999997653 358888888887777 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc-c-CC---CCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-V-AR---YQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~-~~---~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
....... ......||+.|+| |. . .. .+.++|||||||++|||++|+.||.....
T Consensus 186 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------------- 245 (298)
T 2zv2_A 186 EFKGSDA-------LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI------------- 245 (298)
T ss_dssp ECSSSSC-------EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH-------------
T ss_pred ccccccc-------cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH-------------
Confidence 7654321 2334679999977 87 2 22 47889999999999999999999975211
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
............. .+. .+.. ...+.++...|++.+|++|||+.|+++
T Consensus 246 ----~~~~~~~~~~~~~-~~~-~~~~-------~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 ----MCLHSKIKSQALE-FPD-QPDI-------AEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp ----HHHHHHHHHCCCC-CCS-SSCC-------CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----HHHHHHHhcccCC-CCC-cccc-------CHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1111111111111 010 0111 123446777999999999999999874
No 227
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.81 E-value=2.2e-20 Score=189.74 Aligned_cols=172 Identities=24% Similarity=0.327 Sum_probs=123.2
Q ss_pred CCCceeEEecccCCCchhhhccCCC-------------CCcccCHHHHHHHHhhC------------------CCceeeC
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNE-------------ATRRLDLAEGLKIAVDI------------------PSNVLLD 440 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~ia~~i------------------~~NILld 440 (614)
.++..++||||+++|+|.+++.... ....+++..+..++.++ |+||+++
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 97 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG 176 (327)
T ss_dssp ETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred eCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc
Confidence 4567899999999999999997642 12468999988888877 9999999
Q ss_pred CCCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCccccc
Q 046036 441 YDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFAD 516 (614)
Q Consensus 441 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~ 516 (614)
.++.+||+|||+++...... ......+++.|+| |. ...++.++|||||||+++||+| |+.||.....
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~- 247 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC- 247 (327)
T ss_dssp GGGCEEECCTTCEESSCEEC--------CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-
T ss_pred CCCeEEEcccCcCccccccc--------cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-
Confidence 99999999999997543221 1233567888977 87 5678999999999999999998 9999975321
Q ss_pred CchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 517 CLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 517 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
.+.. ..+........ .... ...+.++...|++.+|++|||+.|+++.|+.+.+.
T Consensus 248 ----------------~~~~-~~~~~~~~~~~--~~~~-------~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 248 ----------------AELY-EKLPQGYRLEK--PLNC-------DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp ----------------HHHH-HHGGGTCCCCC--CTTB-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ----------------HHHH-HHhhcCCCCCC--CCCC-------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 11111111110 0111 12344677799999999999999999999988765
Q ss_pred hh
Q 046036 597 LL 598 (614)
Q Consensus 597 ~~ 598 (614)
..
T Consensus 302 ~~ 303 (327)
T 1fvr_A 302 RK 303 (327)
T ss_dssp SS
T ss_pred hc
Confidence 43
No 228
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.81 E-value=1.7e-22 Score=222.63 Aligned_cols=216 Identities=12% Similarity=0.086 Sum_probs=117.4
Q ss_pred cCCCCCCeeeecCCccccc----CCcCCCCCCCCcEEecccccCcccCCcChhh-hccccccccEEEccCCcccccCCCC
Q 046036 8 GNLFRLQNLNFGNSTVQGE----IPSHLSPTSKLTYLSLFSNNLHGIIPPSLDS-FTNLSTKLRILDAGGNQFAGDIPAG 82 (614)
Q Consensus 8 ~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~~l~~~L~~L~L~~N~l~~~~p~~ 82 (614)
.++++|++|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+.. +.+++ +|++|+|++|.+.+ +|..
T Consensus 161 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~-~L~~L~L~~~~~~~-l~~~ 238 (592)
T 3ogk_B 161 THCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCR-SLVSVKVGDFEILE-LVGF 238 (592)
T ss_dssp HHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCT-TCCEEECSSCBGGG-GHHH
T ss_pred hhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCC-CCcEEeccCccHHH-HHHH
Confidence 3577888888888877655 2233456778888888888776332222221 34555 78888888887764 5556
Q ss_pred CcCCCCCCEEeccCCcCc---ccCCccccCCCCCCccccc-------cccc----ccceEecCCCccccccc-hhhhccC
Q 046036 83 IPKYFNLIQLGLDRNCLA---GSIPFSIGKLQNLQKLNPL-------ATSL----YSFQLNLAENNLTGNIP-ESLENLT 147 (614)
Q Consensus 83 ~~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~~L~l~-------~~~~----~l~~L~L~~N~l~~~~~-~~~~~l~ 147 (614)
+..+++|++|+++.+... +..+..+..+++|+.|++. +..+ ++++|+|++|.+++... ..+..++
T Consensus 239 ~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~ 318 (592)
T 3ogk_B 239 FKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCP 318 (592)
T ss_dssp HHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCT
T ss_pred HhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCc
Confidence 666777777777643222 2233455556666666541 1111 56777788777664333 3356667
Q ss_pred CCCeeecccccCC-CCCCCCCCCCCCCCEEEcC-----------CCCCccCCc-ccccCCCCCceeccCCccCCCCcccc
Q 046036 148 SLQILNLSCNHLG-GSIPKPSGLFSTLSSIDFA-----------HNNFNGSLP-LEVGSLSNTQELDFSEHMLSDEIPIT 214 (614)
Q Consensus 148 ~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls-----------~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~ 214 (614)
+|++|+++ |.+. +.++.....+++|++|+++ .|.+++... ..+..+++|++|+++.|.+++..+..
T Consensus 319 ~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~ 397 (592)
T 3ogk_B 319 NLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLES 397 (592)
T ss_dssp TCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHH
T ss_pred CCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHH
Confidence 77777666 3322 1122222334555555555 234432211 11233455555555555554443333
Q ss_pred ccC-cccchHHhc
Q 046036 215 LGN-RSKFEHLLL 226 (614)
Q Consensus 215 ~~~-l~~L~~L~L 226 (614)
+.. +++|+.|++
T Consensus 398 l~~~~~~L~~L~l 410 (592)
T 3ogk_B 398 IGTYLKNLCDFRL 410 (592)
T ss_dssp HHHHCCSCCEEEE
T ss_pred HHhhCCCCcEEEE
Confidence 333 444555555
No 229
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.81 E-value=2.2e-20 Score=193.67 Aligned_cols=113 Identities=21% Similarity=0.306 Sum_probs=94.6
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccc
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfG 451 (614)
+..++..++|||||++|+|.+++... ..+++..+..++.++ |+|||+|.++.+||+|||
T Consensus 122 ~~~~~~~~lV~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG 198 (396)
T 4dc2_A 122 FQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG 198 (396)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEECCEEEEEEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecc
Confidence 34567789999999999999999753 358888888887777 999999999999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCc
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDE 512 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~ 512 (614)
+++...... ......+||+.|+| |. ...++.++||||+||++|||++|+.||..
T Consensus 199 la~~~~~~~-------~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 199 MCKEGLRPG-------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp TCBCCCCTT-------CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred eeeecccCC-------CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 998643222 22445789999977 87 66789999999999999999999999964
No 230
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.81 E-value=2.2e-20 Score=209.12 Aligned_cols=223 Identities=24% Similarity=0.215 Sum_probs=126.5
Q ss_pred CCCcEEecccccCcccCCcChhhhcccc-ccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCC
Q 046036 35 SKLTYLSLFSNNLHGIIPPSLDSFTNLS-TKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNL 113 (614)
Q Consensus 35 ~~L~~L~L~~N~l~~~~p~~~~~~~~l~-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 113 (614)
+.++.|+|.+|.+.. .|..+-....|. .++..++++.|.+. ..|..+..+.+|+.|+|++|.+. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 456777777777764 333311111111 02333445556555 56788999999999999999998 778778899999
Q ss_pred CcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccC
Q 046036 114 QKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGS 193 (614)
Q Consensus 114 ~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 193 (614)
++|+ |++|.|+ .+|..|.+|++|++|+|++|.|+ .+|..++.+++|++|+|++|.|+ .+|..|+.
T Consensus 250 ~~L~------------Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~ 314 (727)
T 4b8c_D 250 TRLY------------LNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGN 314 (727)
T ss_dssp SCCB------------CTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTS
T ss_pred CEEE------------eeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhc
Confidence 9988 9999999 88899999999999999999999 78999999999999999999998 77888999
Q ss_pred CCCCceeccCCccCCCCccccccCccc-chHHhccCccccccCCccccCCCccceEEccCC--------cCcccCCcccC
Q 046036 194 LSNTQELDFSEHMLSDEIPITLGNRSK-FEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHN--------NLSGTIPKELE 264 (614)
Q Consensus 194 l~~L~~L~ls~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N--------~l~~~~p~~~~ 264 (614)
+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |..|++++| .|.+..+..+.
T Consensus 315 l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~ 388 (727)
T 4b8c_D 315 LCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLAT 388 (727)
T ss_dssp CTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------------------------------
T ss_pred CCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhh
Confidence 999999999999999998888866533 345889999999888864 455667766 44444444555
Q ss_pred CCCCCCEEECcCCcCcc
Q 046036 265 TLPFLENLNLSFNNFEG 281 (614)
Q Consensus 265 ~l~~L~~L~ls~N~l~~ 281 (614)
.+..+....+++|-+.+
T Consensus 389 ~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 389 DLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp -------------CCCG
T ss_pred cccccceeeeecccccc
Confidence 66666777777777654
No 231
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.81 E-value=2.5e-20 Score=191.23 Aligned_cols=165 Identities=20% Similarity=0.196 Sum_probs=117.1
Q ss_pred CCCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC------------------CCceeeCCCCC---eeecc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI------------------PSNVLLDYDMT---AYVGD 449 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i------------------~~NILld~~~~---~kl~D 449 (614)
.++..++|||||++|+|.+++.... ....+++..+..++.++ |+|||++.++. +||+|
T Consensus 97 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~D 176 (351)
T 3c0i_A 97 SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGG 176 (351)
T ss_dssp ETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECC
T ss_pred eCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEec
Confidence 4567899999999999998886432 23357888887777776 99999987654 99999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
||+++...... ......+||+.|+| |. ...++.++||||+||++|||+||+.||.....
T Consensus 177 fg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----------- 238 (351)
T 3c0i_A 177 FGVAIQLGESG-------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----------- 238 (351)
T ss_dssp CTTCEECCTTS-------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-----------
T ss_pred CcceeEecCCC-------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-----------
Confidence 99998775432 12334689999977 87 56789999999999999999999999975211
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+.............+.. .......+.++...|++.+|++|||+.|+++
T Consensus 239 -------~~~~~i~~~~~~~~~~~-------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 239 -------RLFEGIIKGKYKMNPRQ-------WSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -------HHHHHHHHTCCCCCHHH-------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------HHHHHHHcCCCCCCccc-------cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111111111111000 0011223446777999999999999999985
No 232
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.81 E-value=1.2e-20 Score=190.01 Aligned_cols=180 Identities=19% Similarity=0.195 Sum_probs=119.0
Q ss_pred ceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccccc
Q 046036 395 FKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARFL 456 (614)
Q Consensus 395 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~~ 456 (614)
..++||||++ |+|.+++.... ...+++..+..++.++ |+||+++.++.+||+|||+++..
T Consensus 93 ~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 170 (308)
T 3g33_A 93 KVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY 170 (308)
T ss_dssp EEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTS
T ss_pred eEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCcccccc
Confidence 4789999998 59999998653 3348999998888887 99999999999999999999876
Q ss_pred CCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh-CCC--
Q 046036 457 PTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA-LPE-- 530 (614)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~-~~~-- 530 (614)
.... ......||+.|+| |. ...++.++||||+||+++||++|+.||....... .+....... .+.
T Consensus 171 ~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 241 (308)
T 3g33_A 171 SYQM--------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPED 241 (308)
T ss_dssp TTCC--------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCCCTT
T ss_pred CCCc--------ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChh
Confidence 5432 2345789999977 87 6788999999999999999999999997532211 111111110 000
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
....... ....... +...........+....+.++...|++.+|++|||+.|+++
T Consensus 242 ~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 242 DWPRDVS-LPRGAFP--PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TSCSSCS-SCGGGSC--CCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hccchhh-ccccccC--CCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000000 0000000 00000001111112234456778999999999999999885
No 233
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.81 E-value=2.4e-20 Score=189.52 Aligned_cols=175 Identities=22% Similarity=0.283 Sum_probs=123.3
Q ss_pred CCCCceeEEecccCCCchhhhccCCC----CCcccCHHHHHHHHhhC------------------CCceeeCC---CCCe
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNE----ATRRLDLAEGLKIAVDI------------------PSNVLLDY---DMTA 445 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~----~~~~l~~~~~~~ia~~i------------------~~NILld~---~~~~ 445 (614)
..++..++||||+++|+|.+++.... ....+++..+..++.++ |+||+++. +..+
T Consensus 103 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 103 LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred cCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceE
Confidence 34566799999999999999997543 12458888888888777 99999994 4569
Q ss_pred eecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHH
Q 046036 446 YVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLH 521 (614)
Q Consensus 446 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~ 521 (614)
||+|||+++........ .......||+.|+| |. ...++.++|||||||+++||+| |+.||.....
T Consensus 183 kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------ 251 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYY-----RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------ 251 (327)
T ss_dssp EECCCHHHHHHHC-----------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------
T ss_pred EECcccccccccccccc-----ccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH------
Confidence 99999999865433211 12334678999977 87 6778999999999999999999 9999865321
Q ss_pred HHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 522 NFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
.+......... ...+.. .....+.++...|++.+|++||++.|+++.|+.+....
T Consensus 252 -----------~~~~~~~~~~~-~~~~~~---------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 252 -----------QEVLEFVTSGG-RMDPPK---------NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp -----------HHHHHHHHTTC-CCCCCT---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -----------HHHHHHHhcCC-CCCCCC---------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 11111111111 111110 11123446778999999999999999999999887654
No 234
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.81 E-value=2.2e-20 Score=196.35 Aligned_cols=115 Identities=23% Similarity=0.302 Sum_probs=95.0
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccc
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfG 451 (614)
+..++..++|||||++|+|.+++... ...+++.....++.++ |+|||+|.++.+||+|||
T Consensus 143 ~~~~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 143 FQDDNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp EECSSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EeeCCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchh
Confidence 44567889999999999999999863 2358888887777766 999999999999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc-c------CCCCccCceeehhHHHHHHHhCCCCCCc
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-V------ARYQHKGKGYSCGILLLEIMTGKRPTDE 512 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~------~~~~~k~DVySfGvvllElltG~~p~~~ 512 (614)
+++....... ......+||++|+| |+ . ..++.++|||||||++|||+||+.||..
T Consensus 221 la~~~~~~~~------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 283 (437)
T 4aw2_A 221 SCLKLMEDGT------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283 (437)
T ss_dssp TCEECCTTSC------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred hhhhcccCCC------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence 9987654332 22344789999977 87 2 4688999999999999999999999975
No 235
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.81 E-value=1.3e-20 Score=196.37 Aligned_cols=113 Identities=20% Similarity=0.321 Sum_probs=92.1
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccc
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfG 451 (614)
+..++..++|||||++|+|.++++.. .+++.....++.++ |+|||+|.++.+||+|||
T Consensus 138 ~~~~~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 138 FQDDRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp EECSSEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEECCEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccc
Confidence 34567789999999999999999753 37777777776666 999999999999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--cCC----CCccCceeehhHHHHHHHhCCCCCCc
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VAR----YQHKGKGYSCGILLLEIMTGKRPTDE 512 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~----~~~k~DVySfGvvllElltG~~p~~~ 512 (614)
+++....... ......+||+.|+| |+ ... ++.++|||||||++|||+||+.||..
T Consensus 214 ~a~~~~~~~~------~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 214 TCMKMNKEGM------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp TCEECCTTSE------EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred eeEeeccCCc------ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 9987654321 12335789999977 87 222 78999999999999999999999975
No 236
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.81 E-value=8.8e-21 Score=195.83 Aligned_cols=168 Identities=9% Similarity=0.006 Sum_probs=120.0
Q ss_pred CCCceeEEecccCCCchhhhccCCC--CCcccCHHHHHHHHhhC------------------CCceeeCC----------
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNE--ATRRLDLAEGLKIAVDI------------------PSNVLLDY---------- 441 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~--~~~~l~~~~~~~ia~~i------------------~~NILld~---------- 441 (614)
.++..++|||||++|+|.++++... ....++|..+..|+.++ |+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-----
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccc
Confidence 4567899999999999999997421 23469999999998888 99999998
Q ss_pred -CCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccC
Q 046036 442 -DMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADC 517 (614)
Q Consensus 442 -~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~ 517 (614)
++.+||+|||+|+.+...... ......+||++|+| |+ ...++.++|||||||++|||+||+.||.......
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 292 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKG-----TIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE 292 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTT-----EEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE
T ss_pred ccCCEEEeeCchhhhhhccCCC-----ceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc
Confidence 899999999999765432211 23455789999977 87 6668999999999999999999999986432211
Q ss_pred chHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCC-CCHHHHHHHHHHhHHH
Q 046036 518 LSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNER-MGVREMVMEMNVIKEV 596 (614)
Q Consensus 518 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~R-Psm~ev~~~L~~i~~~ 596 (614)
..+ .......+ . .+... ++...|++.+|.+| |+++++.+.|+.+-+.
T Consensus 293 ~~~--------------------~~~~~~~~-~--------~~~~~---~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 293 CKP--------------------EGLFRRLP-H--------LDMWN---EFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp EEE--------------------CSCCTTCS-S--------HHHHH---HHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred eee--------------------chhccccC-c--------HHHHH---HHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 100 00000000 0 11122 23446677888888 7788888888776554
No 237
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=5.7e-23 Score=223.04 Aligned_cols=216 Identities=18% Similarity=0.176 Sum_probs=155.1
Q ss_pred CCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCC
Q 046036 32 SPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQ 111 (614)
Q Consensus 32 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 111 (614)
..+++|+.|+|++|+|+ .+|.. +.+++ +|+.|++++|......|.. +..+.+.+..|..++.++
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~---i~~l~-~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~ 409 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSE---LESCK-ELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFS 409 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHH---HHHHH-HHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHH---HHHHH-HHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHH
Confidence 56888899999999987 67877 55565 7788888776521112210 111223345555666666
Q ss_pred CCCccccc-cccc-ccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcc
Q 046036 112 NLQKLNPL-ATSL-YSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPL 189 (614)
Q Consensus 112 ~L~~L~l~-~~~~-~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 189 (614)
+|+.|+.. .+.+ .+..+.+++|.++...+ ..|+.|+|++|.|++ +|. ++.+++|+.|+|++|.|+ .+|.
T Consensus 410 ~L~~L~~l~~n~~~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~ 480 (567)
T 1dce_A 410 TLKAVDPMRAAYLDDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPP 480 (567)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCG
T ss_pred hcccCcchhhcccchhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccch
Confidence 66655521 1111 23334466776663322 258889999999985 666 888899999999999998 7788
Q ss_pred cccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccC-CccccCCCccceEEccCCcCcccCCcc---cCC
Q 046036 190 EVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRI-PPFFGSFKGTIDLNLSHNNLSGTIPKE---LET 265 (614)
Q Consensus 190 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~---~~~ 265 (614)
.++.+++|+.|+|++|.|++ +| .++.+++|+.|+|++|.|++.. |..++.+++|+.|+|++|++++.+|.. +..
T Consensus 481 ~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~ 558 (567)
T 1dce_A 481 ALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEM 558 (567)
T ss_dssp GGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHH
T ss_pred hhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHH
Confidence 89999999999999999987 45 7888999999999999998776 888999999999999999998765532 234
Q ss_pred CCCCCEEEC
Q 046036 266 LPFLENLNL 274 (614)
Q Consensus 266 l~~L~~L~l 274 (614)
+++|+.|++
T Consensus 559 lp~L~~L~l 567 (567)
T 1dce_A 559 LPSVSSILT 567 (567)
T ss_dssp CTTCSEEEC
T ss_pred CcccCccCC
Confidence 788988874
No 238
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.81 E-value=8.8e-21 Score=192.40 Aligned_cols=171 Identities=18% Similarity=0.247 Sum_probs=105.5
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCC---Ceeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDM---TAYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~---~~kl~D 449 (614)
..++..++|||||++|+|.+++... ..+++..+..++.++ |+|||++.++ .+||+|
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~D 152 (325)
T 3kn6_A 76 HDQLHTFLVMELLNGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIID 152 (325)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECC
T ss_pred EcCCEEEEEEEccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEec
Confidence 3466789999999999999999854 358898888888877 9999997665 899999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
||+++....... .....+||++|+| |. ...++.++|||||||+++||++|+.||........
T Consensus 153 fg~a~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-------- 217 (325)
T 3kn6_A 153 FGFARLKPPDNQ-------PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-------- 217 (325)
T ss_dssp CTTCEECCC-----------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---------------
T ss_pred cccceecCCCCC-------cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc--------
Confidence 999987654321 2345678999977 87 66789999999999999999999999975322100
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.....+.......+........ .......+.++...|++.+|++|||++|+++
T Consensus 218 --~~~~~~~~~~i~~~~~~~~~~~-------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 218 --CTSAVEIMKKIKKGDFSFEGEA-------WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp --CCCHHHHHHHHTTTCCCCCSHH-------HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred --cccHHHHHHHHHcCCCCCCccc-------ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0111222222222222111100 0112233456777999999999999999873
No 239
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.81 E-value=1.8e-20 Score=195.54 Aligned_cols=194 Identities=20% Similarity=0.185 Sum_probs=127.1
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceee----CCCCCeeeccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLL----DYDMTAYVGDF 450 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILl----d~~~~~kl~Df 450 (614)
....++|||||++|+|.+++........+++..+..++.++ |+|||+ +.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DF 160 (396)
T 4eut_A 81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (396)
T ss_dssp TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecC
Confidence 34679999999999999999865433448999998888877 999999 88888999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--c--------CCCCccCceeehhHHHHHHHhCCCCCCcccccCc-
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V--------ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCL- 518 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~--------~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~- 518 (614)
|+++...... ......||+.|+| |. . ..++.++|||||||++|||+||+.||........
T Consensus 161 G~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 232 (396)
T 4eut_A 161 GAARELEDDE--------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (396)
T ss_dssp GGCEECCCGG--------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC
T ss_pred CCceEccCCC--------ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch
Confidence 9998765432 2334679999977 86 2 4678899999999999999999999975322111
Q ss_pred -hHHHHHHhhCCCChHHHHHHHHhcC--cCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHH
Q 046036 519 -SLHNFCEMALPESVMELVYSRLLQG--VDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKE 595 (614)
Q Consensus 519 -~l~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~ 595 (614)
....-.....|......+....... +............ .....+..+...|++.||++||++.|+++.++.+..
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSR---GLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCH---HHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccch---HHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 1111111111110000000000000 0000000111111 223344567779999999999999999999987765
Q ss_pred Hh
Q 046036 596 VL 597 (614)
Q Consensus 596 ~~ 597 (614)
..
T Consensus 310 ~~ 311 (396)
T 4eut_A 310 RM 311 (396)
T ss_dssp CE
T ss_pred ce
Confidence 43
No 240
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.81 E-value=5.6e-20 Score=185.61 Aligned_cols=156 Identities=22% Similarity=0.347 Sum_probs=115.5
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
..+..++||||+++|+|.+++... ..+++.....++.++ |+|||++.++.+||+|||++
T Consensus 77 ~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a 153 (318)
T 1fot_A 77 DAQQIFMIMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFA 153 (318)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eCCEEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcc
Confidence 456789999999999999999753 357888877777766 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
+..... ....+||+.|+| |. ...++.++||||+||++|||++|+.||.....
T Consensus 154 ~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------------- 208 (318)
T 1fot_A 154 KYVPDV----------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--------------- 208 (318)
T ss_dssp EECSSC----------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH---------------
T ss_pred eecCCc----------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---------------
Confidence 876432 234689999977 87 66789999999999999999999999975211
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCC-----CHHHHHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERM-----GVREMVM 588 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RP-----sm~ev~~ 588 (614)
.+.....+...... | +.+. + .+.++...|++.+|++|| ++.|+++
T Consensus 209 --~~~~~~i~~~~~~~-p---~~~~----~---~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 209 --MKTYEKILNAELRF-P---PFFN----E---DVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --HHHHHHHHHCCCCC-C---TTSC----H---HHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --HHHHHHHHhCCCCC-C---CCCC----H---HHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 11222222222111 1 0111 1 233456689999999999 8888874
No 241
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.81 E-value=1.3e-20 Score=190.15 Aligned_cols=168 Identities=18% Similarity=0.315 Sum_probs=109.2
Q ss_pred ceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccccc
Q 046036 395 FKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARFL 456 (614)
Q Consensus 395 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~~ 456 (614)
..++||||+++|+|.++++.. ..+++..+..++.++ |+||+++.++.+||+|||+++..
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred ccEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 348999999999999999753 358888888888777 99999999999999999999876
Q ss_pred CCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCCChH
Q 046036 457 PTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPESVM 533 (614)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~ 533 (614)
...... ........||+.|+| |. ...++.++|||||||++|||+||+.||......
T Consensus 167 ~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~----------------- 225 (311)
T 3ork_A 167 ADSGNS----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV----------------- 225 (311)
T ss_dssp -------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----------------
T ss_pred cccccc----cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-----------------
Confidence 543221 112334679999977 87 668899999999999999999999999753221
Q ss_pred HHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH-HHHHh
Q 046036 534 ELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM-EMNVI 593 (614)
Q Consensus 534 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~-~L~~i 593 (614)
+.....+.....+ ... ........+.++...|++.+|++||++.+++. .+.++
T Consensus 226 ~~~~~~~~~~~~~----~~~---~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 226 SVAYQHVREDPIP----PSA---RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HHHHHHHHCCCCC----HHH---HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCC----ccc---ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 1111111111100 000 00011223446778999999999997777664 44433
No 242
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=1e-22 Score=221.08 Aligned_cols=202 Identities=16% Similarity=0.138 Sum_probs=160.0
Q ss_pred ccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccc
Q 046036 59 TNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGN 138 (614)
Q Consensus 59 ~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~ 138 (614)
..++ +|+.|+|++|+++ .+|..++++++|+.|++++|......|.. +..+++.+.
T Consensus 346 ~~~~-~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------------------l~~~~~~~~ 400 (567)
T 1dce_A 346 ATDE-QLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------------------MRALDPLLY 400 (567)
T ss_dssp STTT-TSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------------------HHHHCTGGG
T ss_pred ccCc-cceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------------------HHhcccccC
Confidence 4455 8899999999997 78999999999999999776532222211 222334456
Q ss_pred cchhhhccCCCCeee-cccc-------------cCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCC
Q 046036 139 IPESLENLTSLQILN-LSCN-------------HLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSE 204 (614)
Q Consensus 139 ~~~~~~~l~~L~~L~-L~~N-------------~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~ 204 (614)
+|..++.+++|+.|+ ++.| .++.. |. ..|+.|+|++|.|++ +|. ++.+++|+.|+|++
T Consensus 401 ~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~ 472 (567)
T 1dce_A 401 EKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSH 472 (567)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCS
T ss_pred CHHHHHHHHhcccCcchhhcccchhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCc
Confidence 777788888887777 4544 44421 21 258999999999995 666 99999999999999
Q ss_pred ccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccC-CcccCCCCCCCEEECcCCcCcccC
Q 046036 205 HMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTI-PKELETLPFLENLNLSFNNFEGQL 283 (614)
Q Consensus 205 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~ 283 (614)
|.|+ .+|..|+.+++|+.|+|++|.|++ +| .++.+++|+.|+|++|+|++.. |..+..+++|+.|++++|++++.+
T Consensus 473 N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 473 NRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp SCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred cccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 9999 678899999999999999999996 66 8999999999999999999877 999999999999999999999988
Q ss_pred CCccc----cCCCceEE
Q 046036 284 PSMSV----FTNTSVIS 296 (614)
Q Consensus 284 p~~~~----~~~l~~~~ 296 (614)
|.... +++++.++
T Consensus 550 ~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 550 GIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SCTTHHHHHCTTCSEEE
T ss_pred cHHHHHHHHCcccCccC
Confidence 75432 56776664
No 243
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.81 E-value=1.9e-20 Score=189.50 Aligned_cols=179 Identities=15% Similarity=0.154 Sum_probs=116.1
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ...+++..+..++.++ |+||+++ ++.+||+|||+
T Consensus 99 ~~~~~~~iv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~ 175 (319)
T 2y4i_B 99 MSPPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGL 175 (319)
T ss_dssp ECSSCEEEECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred ecCCceEEEeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCC
Confidence 3456789999999999999999764 2358888888887777 9999998 67999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc-c----------CCCCccCceeehhHHHHHHHhCCCCCCcccccCchH
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-V----------ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSL 520 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~----------~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l 520 (614)
++........ ..........||+.|+| |. . ..++.++|||||||+++||+||+.||......
T Consensus 176 ~~~~~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---- 249 (319)
T 2y4i_B 176 FSISGVLQAG--RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE---- 249 (319)
T ss_dssp CC------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH----
T ss_pred cccccccccc--ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 8765432111 00112334569999977 76 2 24788999999999999999999999753211
Q ss_pred HHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhcc
Q 046036 521 HNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLGV 600 (614)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~~ 600 (614)
+.... +.....+.... ... ...+.+++..|++.+|++|||+.|++++|+.+.....+.
T Consensus 250 -------------~~~~~-~~~~~~~~~~~-~~~-------~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~ 307 (319)
T 2y4i_B 250 -------------AIIWQ-MGTGMKPNLSQ-IGM-------GKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRL 307 (319)
T ss_dssp -------------HHHHH-HHTTCCCCCCC-SSC-------CTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-------
T ss_pred -------------HHHHH-hccCCCCCCCc-CCC-------CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 11111 11111111000 000 112345777999999999999999999999998776544
No 244
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.81 E-value=5e-20 Score=185.54 Aligned_cols=170 Identities=16% Similarity=0.240 Sum_probs=111.9
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+||+|||++
T Consensus 105 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~ 181 (309)
T 2h34_A 105 IDGQLYVDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIA 181 (309)
T ss_dssp ETTEEEEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-
T ss_pred eCCeEEEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccC
Confidence 356789999999999999999753 358888888888877 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
+....... .......||+.|+| |. ...++.++||||||++++||+||+.||......
T Consensus 182 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------------- 241 (309)
T 2h34_A 182 SATTDEKL------TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------------- 241 (309)
T ss_dssp ---------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--------------
T ss_pred cccccccc------ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--------------
Confidence 87654321 12334679999976 87 667889999999999999999999999753211
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCC-CHHHHHHHHHHhHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERM-GVREMVMEMNVIKE 595 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RP-sm~ev~~~L~~i~~ 595 (614)
.+...+...........+.. ...+.++...|++.+|++|| +++++++.|+++..
T Consensus 242 ----~~~~~~~~~~~~~~~~~~~~-------~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 242 ----VMGAHINQAIPRPSTVRPGI-------PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp ----HHHHHHHSCCCCGGGTSTTC-------CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred ----HHHHHhccCCCCccccCCCC-------CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 11111111111000000111 11234567799999999999 99999999986643
No 245
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.81 E-value=2e-20 Score=186.59 Aligned_cols=172 Identities=19% Similarity=0.229 Sum_probs=120.1
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
+..++||||+++|+|.+++... ...+++..+.+++.++ |+||+++.++.+||+|||+++.
T Consensus 93 ~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 93 PPMKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp SSCEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred CCceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccc
Confidence 3478999999999999999753 2358888888888777 9999999999999999999987
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCCC
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
....... ........||+.|+| |. ...++.++|||||||+++||++ |+.||.....
T Consensus 171 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---------------- 230 (291)
T 1u46_A 171 LPQNDDH----YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG---------------- 230 (291)
T ss_dssp CCC-CCE----EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH----------------
T ss_pred ccccccc----hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH----------------
Confidence 7544321 112234568888977 87 5678899999999999999999 9999975321
Q ss_pred hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHh
Q 046036 532 VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVL 597 (614)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~ 597 (614)
.+.+......... .+ ... .....+.+++..|++.+|++|||+.++++.|+++....
T Consensus 231 -~~~~~~~~~~~~~-~~-~~~-------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 231 -SQILHKIDKEGER-LP-RPE-------DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp -HHHHHHHHTSCCC-CC-CCT-------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred -HHHHHHHHccCCC-CC-CCc-------CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 1111111111111 00 000 11223456777999999999999999999998876543
No 246
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.81 E-value=1.9e-20 Score=186.38 Aligned_cols=165 Identities=18% Similarity=0.210 Sum_probs=112.8
Q ss_pred CCCCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC------------------CCceee---CCCCCeeec
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI------------------PSNVLL---DYDMTAYVG 448 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i------------------~~NILl---d~~~~~kl~ 448 (614)
...+..++||||+++|+|.+++.... ....+++..+.+++.++ |+||++ +.++.+||+
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~ 169 (285)
T 3is5_A 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKII 169 (285)
T ss_dssp ECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEEC
T ss_pred ecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEE
Confidence 34567899999999999999986421 23458888888888777 999999 456789999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
|||+++...... ......||+.|+| |. ...++.++|||||||+++||++|+.||......
T Consensus 170 Dfg~a~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~---------- 231 (285)
T 3is5_A 170 DFGLAELFKSDE--------HSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE---------- 231 (285)
T ss_dssp CCCCCCC------------------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----------
T ss_pred eeecceecCCcc--------cCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHH----------
Confidence 999998765432 1334679999977 87 778899999999999999999999999753211
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+................++ . ...+.++...|++.+|++|||+.||++
T Consensus 232 -------~~~~~~~~~~~~~~~~~~~-~-------~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 232 -------EVQQKATYKEPNYAVECRP-L-------TPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp -------HHHHHHHHCCCCCCC--CC-C-------CHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred -------HHHhhhccCCcccccccCc-C-------CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111111110000000 0 123345777999999999999999985
No 247
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.81 E-value=3.6e-20 Score=189.02 Aligned_cols=167 Identities=17% Similarity=0.179 Sum_probs=116.8
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCC----CCeeec
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYD----MTAYVG 448 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~----~~~kl~ 448 (614)
..++..++|||||++|+|.+++... ..+++.....++.++ |+|||+.++ +.+||+
T Consensus 86 ~~~~~~~lv~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~ 162 (342)
T 2qr7_A 86 DDGKYVYVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRIC 162 (342)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEEC
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEE
Confidence 4567789999999999999999754 358888888887777 999998543 349999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
|||+++....... .....+||+.|+| |. ...++.++||||+||++|||++|+.||......
T Consensus 163 Dfg~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------- 226 (342)
T 2qr7_A 163 DFGFAKQLRAENG-------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--------- 226 (342)
T ss_dssp CCTTCEECBCTTC-------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS---------
T ss_pred ECCCcccCcCCCC-------ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC---------
Confidence 9999987654322 2345689999977 87 456889999999999999999999999753211
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
...+++.....+............. ..+.++...|++.+|++||++.|+++
T Consensus 227 -----~~~~~~~~i~~~~~~~~~~~~~~~s-------~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 227 -----TPEEILARIGSGKFSLSGGYWNSVS-------DTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp -----CHHHHHHHHHHCCCCCCSTTTTTSC-------HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -----CHHHHHHHHccCCcccCccccccCC-------HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1112222222222211111111111 12335667899999999999999885
No 248
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.80 E-value=1.7e-20 Score=187.07 Aligned_cols=159 Identities=20% Similarity=0.348 Sum_probs=114.1
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------CCceeeC-CCCCeeecccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------PSNVLLD-YDMTAYVGDFG 451 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------~~NILld-~~~~~kl~DfG 451 (614)
+...++||||+++|+|.+++... ..+++..+..++.++ |+||+++ .++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 101 KKCIVLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp CEEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred CceEEEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 46689999999999999999753 347787777776655 8999998 78999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+++..... ......||+.|+| |. ...++.++||||+||+++||+||+.||.......
T Consensus 178 ~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------------ 236 (290)
T 1t4h_A 178 LATLKRAS---------FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA------------ 236 (290)
T ss_dssp GGGGCCTT---------SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH------------
T ss_pred Cccccccc---------ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH------------
Confidence 99765432 1334679999976 87 6679999999999999999999999997532110
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.. ...+.....+.. ... .....+.++...|++.+|++|||+.|+++
T Consensus 237 ----~~-~~~~~~~~~~~~-~~~-------~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 237 ----QI-YRRVTSGVKPAS-FDK-------VAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ----HH-HHHHTTTCCCGG-GGG-------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----HH-HHHHhccCCccc-cCC-------CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11 111111110000 000 01123456778999999999999999985
No 249
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.80 E-value=3.1e-20 Score=191.92 Aligned_cols=161 Identities=19% Similarity=0.271 Sum_probs=115.8
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
...+..++|||||++|+|.+++... ..+++..+..++.++ |+|||++.++.+||+|||+
T Consensus 85 ~~~~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~ 161 (384)
T 4fr4_A 85 QDEEDMFMVVDLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNI 161 (384)
T ss_dssp ECSSEEEEEECCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EeCCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccce
Confidence 3466789999999999999999853 358888888877776 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc-c----CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-V----ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~----~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
++.+.... .....+||++|+| |+ . ..++.++||||+||++|||+||+.||.......
T Consensus 162 a~~~~~~~--------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--------- 224 (384)
T 4fr4_A 162 AAMLPRET--------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--------- 224 (384)
T ss_dssp CEECCTTC--------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC---------
T ss_pred eeeccCCC--------ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc---------
Confidence 98765432 2445789999977 87 2 348899999999999999999999997532211
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCC-HHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMG-VREMV 587 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPs-m~ev~ 587 (614)
..+.......... ..|. .+ -..+.++...|++.+|++||+ +.+|.
T Consensus 225 -----~~~~~~~~~~~~~-~~p~---~~-------s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 225 -----SKEIVHTFETTVV-TYPS---AW-------SQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp -----HHHHHHHHHHCCC-CCCT---TS-------CHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred -----HHHHHHHHhhccc-CCCC---cC-------CHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 1111111111111 1111 11 123345667899999999998 66554
No 250
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.80 E-value=6.1e-20 Score=203.70 Aligned_cols=156 Identities=22% Similarity=0.284 Sum_probs=116.6
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccc
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfG 451 (614)
+...+..|+|||||++|+|.++++.. ..+++..+..++.++ |+|||+|.++.+||+|||
T Consensus 411 ~~~~~~~~lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFG 487 (674)
T 3pfq_A 411 FQTMDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFG 487 (674)
T ss_dssp CBCSSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCT
T ss_pred EEeCCEEEEEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecc
Confidence 34567789999999999999999853 358888888888777 999999999999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
+++...... ......+||++|+| |+ ...++.++|||||||++|||+||+.||.....
T Consensus 488 la~~~~~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------------- 547 (674)
T 3pfq_A 488 MCKENIWDG-------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------------- 547 (674)
T ss_dssp TCEECCCTT-------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-------------
T ss_pred eeeccccCC-------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-------------
Confidence 998644332 22445789999977 87 67899999999999999999999999975321
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGV 583 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm 583 (614)
.+.....+..... .|. .+. ..+.++...|++.+|++||++
T Consensus 548 ----~~~~~~i~~~~~~-~p~---~~s-------~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 548 ----DELFQSIMEHNVA-YPK---SMS-------KEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp ----HHHHHHHHSSCCC-CCT---TSC-------HHHHHHHHHHSCSSSTTCTTC
T ss_pred ----HHHHHHHHhCCCC-CCc---cCC-------HHHHHHHHHHccCCHHHCCCC
Confidence 1222222222211 111 111 123356668999999999998
No 251
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.80 E-value=6.7e-20 Score=185.70 Aligned_cols=163 Identities=18% Similarity=0.204 Sum_probs=118.3
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCC----Ceeec
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDM----TAYVG 448 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~----~~kl~ 448 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++ .+||+
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 85 ENRTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred ecCCEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEc
Confidence 3456789999999999999999753 358888888887777 9999999888 79999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
|||+++...... ......||+.|+| |. ...++.++|||||||+++||+||+.||......
T Consensus 162 Dfg~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------- 224 (321)
T 2a2a_A 162 DFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------- 224 (321)
T ss_dssp CCTTCEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---------
T ss_pred cCccceecCccc--------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH---------
Confidence 999998765432 1334679999977 87 567899999999999999999999999753211
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+.+........... +.. .......+.++...|++.+|++|||+.|+++
T Consensus 225 --------~~~~~i~~~~~~~~----~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 225 --------ETLANITSVSYDFD----EEF---FSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --------HHHHHHHTTCCCCC----HHH---HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --------HHHHHHHhcccccC----hhh---hcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11111111111000 000 0011123446778999999999999999986
No 252
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.80 E-value=4.1e-20 Score=190.64 Aligned_cols=163 Identities=21% Similarity=0.341 Sum_probs=117.3
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
...+..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+|++|||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCc
Confidence 3456789999999999999999743 358888888887777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc-c-------CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHH
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-V-------ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNF 523 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~-------~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~ 523 (614)
++.+.... .....+||+.|+| |+ . ..++.++|||||||++|||+||+.||..... .
T Consensus 247 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~----- 311 (365)
T 2y7j_A 247 SCHLEPGE--------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--I----- 311 (365)
T ss_dssp CEECCTTC--------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--H-----
T ss_pred ccccCCCc--------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--H-----
Confidence 98775432 2334789999977 86 1 2578899999999999999999999975211 0
Q ss_pred HHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 524 CEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+............. .+.+ ......+.++...|++.+|++|||+.|+++
T Consensus 312 ----------~~~~~i~~~~~~~~---~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 312 ----------LMLRMIMEGQYQFS---SPEW----DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ----------HHHHHHHHTCCCCC---HHHH----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ----------HHHHHHHhCCCCCC---Cccc----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111111111000 0000 011123456777999999999999999986
No 253
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.80 E-value=4.4e-20 Score=204.25 Aligned_cols=169 Identities=20% Similarity=0.265 Sum_probs=120.9
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
++..++||||+++|+|.+++... ...++|..+..++.++ |+|||++.++.+||+|||+++
T Consensus 462 ~~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 462 ENPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred cCceEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence 45679999999999999999753 2358898888887776 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
....... .......||+.|+| |. ...++.++|||||||++|||++ |+.||......
T Consensus 540 ~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-------------- 599 (656)
T 2j0j_A 540 YMEDSTY------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-------------- 599 (656)
T ss_dssp SCCC----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------------
T ss_pred ecCCCcc------eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--------------
Confidence 7654322 12334567889977 87 6688999999999999999997 99999753211
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEV 596 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~ 596 (614)
+.+.........+.+. .+...+.+++..|++.+|++|||+.|+++.|+.+.+.
T Consensus 600 ---~~~~~i~~~~~~~~~~----------~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 600 ---DVIGRIENGERLPMPP----------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ---HHHHHHHHTCCCCCCT----------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHcCCCCCCCc----------cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 1111111111111111 1112344677899999999999999999999988654
No 254
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.80 E-value=4.6e-20 Score=195.63 Aligned_cols=159 Identities=19% Similarity=0.245 Sum_probs=115.4
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC-------------------CCceeeCCCCCeeeccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI-------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i-------------------~~NILld~~~~~kl~DfGl 452 (614)
..+..++|||||++|+|.+++... ..+++..+..++.++ |+|||++.++.+||+|||+
T Consensus 219 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~ 295 (446)
T 4ejn_A 219 THDRLCFVMEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 295 (446)
T ss_dssp ETTEEEEEECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCC
T ss_pred eCCEEEEEEeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCC
Confidence 456789999999999999999753 357888777776655 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++...... ......+||++|+| |+ ...++.++|||||||+++||+||+.||.....
T Consensus 296 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------------- 354 (446)
T 4ejn_A 296 CKEGIKDG-------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-------------- 354 (446)
T ss_dssp CCTTCC------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------------
T ss_pred ceeccCCC-------cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--------------
Confidence 98644332 12345789999977 87 67899999999999999999999999975321
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCC-----CHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERM-----GVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RP-----sm~ev~~ 588 (614)
.+........... .|.. .. ..+.++...|++.+|++|| +++|+++
T Consensus 355 ---~~~~~~i~~~~~~-~p~~---~~-------~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 355 ---EKLFELILMEEIR-FPRT---LG-------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ---HHHHHHHHHCCCC-CCTT---SC-------HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---HHHHHHHHhCCCC-CCcc---CC-------HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1112222222111 1110 11 1234566789999999999 9999985
No 255
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.80 E-value=5.8e-20 Score=186.87 Aligned_cols=167 Identities=19% Similarity=0.281 Sum_probs=115.5
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
+...++|||||++|+|.+++.........+|..+.+++.++ |+||+++.++.+||+|||+++
T Consensus 133 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 212 (332)
T 3qd2_B 133 KVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVT 212 (332)
T ss_dssp CCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCccc
Confidence 45689999999999999999876555567777777777666 999999999999999999998
Q ss_pred ccCCCCCCCC-----CCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 455 FLPTNVTNPM-----KGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 455 ~~~~~~~~~~-----~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
.......... ..........||+.|+| |. ...++.++|||||||+++||++|..|+....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~------------ 280 (332)
T 3qd2_B 213 AMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV------------ 280 (332)
T ss_dssp ECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH------------
T ss_pred ccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH------------
Confidence 8765422100 00112334679999977 87 6688999999999999999999877653210
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+.......... +. ........+.++...|++.+|++|||+.|+++
T Consensus 281 -------~~~~~~~~~~~-------~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 281 -------RIITDVRNLKF-------PL---LFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp -------HHHHHHHTTCC-------CH---HHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred -------HHHHHhhccCC-------Cc---ccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 00111111000 00 01122233456778999999999999999985
No 256
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.80 E-value=5.8e-20 Score=193.00 Aligned_cols=162 Identities=22% Similarity=0.233 Sum_probs=109.2
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCC---CCeeecccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYD---MTAYVGDFG 451 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~---~~~kl~DfG 451 (614)
.+..++|||||++|+|.+++... ..+++..+..++.++ |+|||++.+ ..+||+|||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred cCceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecc
Confidence 44578999999999999999753 358898888887777 999999754 459999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc-----cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-----VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-----~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
+++...... .....+||++|+| |+ ...++.++|||||||+++||+||+.||........ +.....
T Consensus 288 ~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~i~ 358 (419)
T 3i6u_A 288 HSKILGETS--------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQIT 358 (419)
T ss_dssp TTTSCC-------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHHHH
T ss_pred cceecCCCc--------cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHHHh
Confidence 998765432 2345789999977 87 25678899999999999999999999975322211 111111
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
........+. ..+....+.++...|++.+|++|||+.|+++
T Consensus 359 ~~~~~~~~~~----------------------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 359 SGKYNFIPEV----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp TTCCCCCHHH----------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cCCCCCCchh----------------------hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1100000000 0111223456778999999999999999986
No 257
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.80 E-value=6.2e-20 Score=187.86 Aligned_cols=157 Identities=20% Similarity=0.228 Sum_probs=116.4
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+|||++.++.+||+|||+
T Consensus 111 ~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~ 187 (350)
T 1rdq_E 111 KDNSNLYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGF 187 (350)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EcCCEEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEccccc
Confidence 3456789999999999999999753 258888888887777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++..... ....+||+.|+| |. ...++.++||||+||+++||++|+.||.....
T Consensus 188 a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------------- 243 (350)
T 1rdq_E 188 AKRVKGR----------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-------------- 243 (350)
T ss_dssp CEECSSC----------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------------
T ss_pred ceeccCC----------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--------------
Confidence 9876432 234689999977 87 66789999999999999999999999975321
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCC-----HHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMG-----VREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPs-----m~ev~~ 588 (614)
.+........... .|. .+. ..+.++...|++.+|++||+ ++|+.+
T Consensus 244 ---~~~~~~i~~~~~~-~p~---~~~-------~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 244 ---IQIYEKIVSGKVR-FPS---HFS-------SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ---HHHHHHHHHCCCC-CCT---TCC-------HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ---HHHHHHHHcCCCC-CCC---CCC-------HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1122222222111 111 111 12345667899999999998 787764
No 258
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.80 E-value=8.7e-20 Score=193.73 Aligned_cols=158 Identities=23% Similarity=0.282 Sum_probs=116.7
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++|||||++|+|.+++... ..+++.....++.++ |+|||++.++.+||+|||++
T Consensus 87 ~~~~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a 163 (476)
T 2y94_A 87 TPSDIFMVMEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 163 (476)
T ss_dssp CSSEEEEEEECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred ECCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccch
Confidence 456789999999999999999753 358888888888877 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCC-CCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VAR-YQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~-~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+...... .....+||+.|+| |. ... .+.++||||+||+++||++|+.||++...
T Consensus 164 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-------------- 221 (476)
T 2y94_A 164 NMMSDGE--------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-------------- 221 (476)
T ss_dssp EECCTTC--------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--------------
T ss_pred hhccccc--------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--------------
Confidence 8765432 1334689999977 87 333 47899999999999999999999975311
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.......+.. ..|.. .. ..+.++...|++.+|++|||+.|+++
T Consensus 222 ---~~~~~~i~~~~~-~~p~~---~s-------~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 222 ---PTLFKKICDGIF-YTPQY---LN-------PSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ---HHHHHHHHTTCC-CCCTT---CC-------HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---HHHHHHHhcCCc-CCCcc---CC-------HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 111112221111 11111 11 12345667899999999999999986
No 259
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.80 E-value=1.6e-19 Score=169.16 Aligned_cols=153 Identities=15% Similarity=0.206 Sum_probs=99.1
Q ss_pred CCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCC
Q 046036 32 SPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQ 111 (614)
Q Consensus 32 ~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 111 (614)
+.+++|++|++++|.++ .+| . +..++ +|++|++++|.++ .+..+..+++|++|++++|.+++..+..++.++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~---l~~l~-~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 112 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-G---IEYAH-NIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLT 112 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-T---GGGCT-TCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCT
T ss_pred hhcCCccEEeccCCCcc-ChH-H---HhcCC-CCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCC
Confidence 45566777777777666 344 3 45555 6777777777554 233566677777777777777666666666666
Q ss_pred CCCcccccccccccceEecCCCccccccchhhhccCCCCeeeccccc-CCCCCCCCCCCCCCCCEEEcCCCCCccCCccc
Q 046036 112 NLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNH-LGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLE 190 (614)
Q Consensus 112 ~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 190 (614)
+|++|+ |++|++++..+..+..+++|++|+|++|. ++ .+| .+..+++|+.|++++|.+++ ++ .
T Consensus 113 ~L~~L~------------Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~ 176 (197)
T 4ezg_A 113 SLTLLD------------ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-G 176 (197)
T ss_dssp TCCEEE------------CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-T
T ss_pred CCCEEE------------ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-H
Confidence 666665 77777776666667777777777777776 44 444 46667777777777777764 33 5
Q ss_pred ccCCCCCceeccCCccCC
Q 046036 191 VGSLSNTQELDFSEHMLS 208 (614)
Q Consensus 191 ~~~l~~L~~L~ls~N~l~ 208 (614)
+..+++|+.|++++|++.
T Consensus 177 l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 177 IEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp GGGCSSCCEEEECBC---
T ss_pred hccCCCCCEEEeeCcccC
Confidence 667777777777777764
No 260
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.80 E-value=2.9e-20 Score=193.63 Aligned_cols=121 Identities=17% Similarity=0.162 Sum_probs=93.7
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++|||||++|+|.+++.... ...+++..+..++.++ |+|||++.++.+||+|||.+
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~ 175 (389)
T 3gni_B 97 ADNELWVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSN 175 (389)
T ss_dssp ETTEEEEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGC
T ss_pred ECCEEEEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccc
Confidence 4567899999999999999997542 2458888888888777 99999999999999999998
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--c--CCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V--ARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~--~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
.....................||+.|+| |. . ..++.++|||||||+++||+||+.||.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 176 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp EECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred eeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 7543221110000112233579999977 87 3 57899999999999999999999999764
No 261
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.80 E-value=5.6e-22 Score=218.59 Aligned_cols=290 Identities=13% Similarity=0.075 Sum_probs=182.4
Q ss_pred ccccCCCCCCeeeecCCcccc----cCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCccc---c
Q 046036 5 QEIGNLFRLQNLNFGNSTVQG----EIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFA---G 77 (614)
Q Consensus 5 ~~~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~---~ 77 (614)
..+.++++|++|+|++|.+++ .++..+.++++|++|+|++|.+.+ +|.. +.+++ +|+.|+++++... .
T Consensus 186 ~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~---~~~~~-~L~~L~l~~~~~~~~~~ 260 (592)
T 3ogk_B 186 ELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGF---FKAAA-NLEEFCGGSLNEDIGMP 260 (592)
T ss_dssp HHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHH---HHHCT-TCCEEEECBCCCCTTCT
T ss_pred HHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHH---Hhhhh-HHHhhcccccccccchH
Confidence 345568999999999999873 344455678999999999998885 4544 56666 7888888753322 1
Q ss_pred cCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc-------------ccceEecCCCccc-cccchhh
Q 046036 78 DIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL-------------YSFQLNLAENNLT-GNIPESL 143 (614)
Q Consensus 78 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~-------------~l~~L~L~~N~l~-~~~~~~~ 143 (614)
..+..+..+++|+.|+++++.. +.+|..+..+++|++|++..+.+ +++.|+++ +.+. +.++..+
T Consensus 261 ~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~ 338 (592)
T 3ogk_B 261 EKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLA 338 (592)
T ss_dssp TSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHH
T ss_pred HHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHH
Confidence 2233445555666666655432 24555555555666655522211 45566677 4443 3334445
Q ss_pred hccCCCCeeeccc-----------ccCCCC-CCCCCCCCCCCCEEEcCCCCCccCCcccccC-CCCCceeccC----Ccc
Q 046036 144 ENLTSLQILNLSC-----------NHLGGS-IPKPSGLFSTLSSIDFAHNNFNGSLPLEVGS-LSNTQELDFS----EHM 206 (614)
Q Consensus 144 ~~l~~L~~L~L~~-----------N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~ls----~N~ 206 (614)
..+++|++|+|++ |.+++. ++.....+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.
T Consensus 339 ~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~ 418 (592)
T 3ogk_B 339 QYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREER 418 (592)
T ss_dssp HHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSC
T ss_pred HhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCcc
Confidence 6678888888883 455422 1111234678888888888887766666655 7788888885 566
Q ss_pred CCCC-----ccccccCcccchHHhccCcc--ccccCCcccc-CCCccceEEccCCcCcc-cCCcccCCCCCCCEEECcCC
Q 046036 207 LSDE-----IPITLGNRSKFEHLLLGGNM--FQGRIPPFFG-SFKGTIDLNLSHNNLSG-TIPKELETLPFLENLNLSFN 277 (614)
Q Consensus 207 l~~~-----~~~~~~~l~~L~~L~L~~N~--l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ls~N 277 (614)
+++. ++..+..+++|+.|++++|. +++..+..+. .+++|+.|+|++|++++ .++..+..+++|+.|++++|
T Consensus 419 l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n 498 (592)
T 3ogk_B 419 ITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGC 498 (592)
T ss_dssp CSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESC
T ss_pred ccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCC
Confidence 7653 33335567788888886433 5444444443 36778888888888775 34455567788888888888
Q ss_pred cCccc-CCC-ccccCCCceEEEecCC
Q 046036 278 NFEGQ-LPS-MSVFTNTSVISIVGNG 301 (614)
Q Consensus 278 ~l~~~-~p~-~~~~~~l~~~~~~~N~ 301 (614)
.+++. ++. ...+++++.+++.+|.
T Consensus 499 ~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 499 CFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp CCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred CCcHHHHHHHHHhcCccCeeECcCCc
Confidence 87643 222 2346777888888876
No 262
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.80 E-value=4.4e-20 Score=186.12 Aligned_cols=185 Identities=17% Similarity=0.138 Sum_probs=116.0
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+||+|||++
T Consensus 73 ~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 149 (311)
T 4agu_A 73 RKRRLHLVFEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFA 149 (311)
T ss_dssp ETTEEEEEEECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred cCCeEEEEEEeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCc
Confidence 356689999999999999998743 358888888887776 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+....... ......||++|+| |. ...++.++||||+||+++||+||+.||........ . ........
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~-~~~~~~~~ 220 (311)
T 4agu_A 150 RLLTGPSD-------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-L-YLIRKTLG 220 (311)
T ss_dssp EECC-------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-H-HHHHHHHC
T ss_pred hhccCccc-------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-H-HHHHHHhc
Confidence 87654321 2334679999977 86 35789999999999999999999999976432111 1 11111111
Q ss_pred CChH---HHHHH--HHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVM---ELVYS--RLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~---~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.... ..... .......+.+................+.++...|++.+|++|||++|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 221 DLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp SCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 1111 11110 01111111111111111111122334567888999999999999999985
No 263
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.80 E-value=2.3e-20 Score=189.77 Aligned_cols=157 Identities=22% Similarity=0.340 Sum_probs=113.1
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+ +|+|.+++... ..+++..+..++.++ |+|||+++++.+||+|||++
T Consensus 80 ~~~~~~lv~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s 155 (336)
T 3h4j_B 80 TPTDIVMVIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155 (336)
T ss_dssp CSSEEEEEECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCT
T ss_pred eCCEEEEEEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccc
Confidence 456789999999 68999998753 358888888888777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCC-CCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VAR-YQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~-~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+...... .....+||+.|+| |. ... .+.++|||||||++|||++|+.||+........
T Consensus 156 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~---------- 217 (336)
T 3h4j_B 156 NIMTDGN--------FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF---------- 217 (336)
T ss_dssp BTTTTSB--------TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB----------
T ss_pred eeccCCc--------ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH----------
Confidence 8765432 2334689999976 87 333 368999999999999999999999753221100
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.. +.......|. ... ..+.++...|++.+|.+|||++|+++
T Consensus 218 ~~--------i~~~~~~~p~---~~s-------~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 218 KK--------VNSCVYVMPD---FLS-------PGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CC--------CCSSCCCCCT---TSC-------HHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred HH--------HHcCCCCCcc---cCC-------HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 00 0000000010 011 12335667999999999999999975
No 264
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.80 E-value=3.5e-20 Score=183.38 Aligned_cols=164 Identities=20% Similarity=0.304 Sum_probs=116.6
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+||+|||++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 152 (276)
T 2yex_A 76 EGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152 (276)
T ss_dssp ETTEEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cCCEEEEEEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCc
Confidence 346679999999999999999753 358888888888777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCC-CCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VAR-YQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~-~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+........ .......||+.|+| |. ... .+.++|||||||+++||+||+.||............|.....
T Consensus 153 ~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 226 (276)
T 2yex_A 153 TVFRYNNRE-----RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT- 226 (276)
T ss_dssp EECEETTEE-----CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT-
T ss_pred cccCCCcch-----hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc-
Confidence 866433211 12334679999976 87 333 477899999999999999999999764332222222221100
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
... ..... -..+.++...|++.+|++|||+.|+++
T Consensus 227 ---------------~~~--~~~~~-------~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 227 ---------------YLN--PWKKI-------DSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ---------------TST--TGGGS-------CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---------------ccC--chhhc-------CHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 000 00001 112345777999999999999999875
No 265
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.80 E-value=6.1e-20 Score=181.78 Aligned_cols=163 Identities=18% Similarity=0.198 Sum_probs=118.2
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceee---CCCCCeeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLL---DYDMTAYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILl---d~~~~~kl~D 449 (614)
..++..++||||+++|+|.+++... ..+++..+.+++.++ |+||++ +.++.+||+|
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~D 152 (277)
T 3f3z_A 76 EDNTDIYLVMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLID 152 (277)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ecCCeEEEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEe
Confidence 3456789999999999999998753 358888888888877 999999 8889999999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
||+++...... ......||+.|+| |. .+.++.++|||||||+++||+||+.||......
T Consensus 153 fg~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----------- 213 (277)
T 3f3z_A 153 FGLAARFKPGK--------MMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDS----------- 213 (277)
T ss_dssp CTTCEECCTTS--------CBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----------
T ss_pred cccceeccCcc--------chhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHH-----------
Confidence 99998765432 1334679999977 87 667899999999999999999999999753211
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+........... .+.. ........+.++...|++.+|++|||+.|+++
T Consensus 214 ------~~~~~~~~~~~~-~~~~------~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 214 ------EVMLKIREGTFT-FPEK------DWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ------HHHHHHHHCCCC-CCHH------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ------HHHHHHHhCCCC-CCch------hhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111111110 0000 00011223446777999999999999999985
No 266
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.80 E-value=1.7e-20 Score=189.54 Aligned_cols=185 Identities=17% Similarity=0.217 Sum_probs=114.4
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCC---eeeccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMT---AYVGDF 450 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~---~kl~Df 450 (614)
.++..++|||||++|+|.+++... ..+++..+..++.++ |+||+++.++. +||+||
T Consensus 82 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Df 158 (316)
T 2ac3_A 82 EEDRFYLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDF 158 (316)
T ss_dssp ETTEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCT
T ss_pred eCCEEEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEc
Confidence 356789999999999999999753 358888888887777 99999998776 999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--c-----CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHH
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-----ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHN 522 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-----~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~ 522 (614)
|+++...................+||+.|+| |. . ..++.++|||||||+++||+||+.||.........
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~--- 235 (316)
T 2ac3_A 159 DLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG--- 235 (316)
T ss_dssp TCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC---
T ss_pred cCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc---
Confidence 9998664322110001112234579999977 86 2 45889999999999999999999999764322110
Q ss_pred HHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 523 FCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
|............+...+.......+.. .....-..+.++...|++.+|++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 236 WDRGEACPACQNMLFESIQEGKYEFPDK------DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp C----CCHHHHHHHHHHHHHCCCCCCHH------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccccchhHHHHHHHHHhccCcccCch------hcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1110000011111222222211111100 00111233456778999999999999999986
No 267
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.80 E-value=9.9e-20 Score=187.58 Aligned_cols=110 Identities=24% Similarity=0.284 Sum_probs=91.5
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCC------------
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDY------------ 441 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~------------ 441 (614)
..+..++||||+ +|+|.+++.... ...+++.....++.++ |+|||++.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~ 184 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRR 184 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEEC
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhc
Confidence 356789999999 899999997643 3358888888887777 99999986
Q ss_pred -------------CCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHh
Q 046036 442 -------------DMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMT 505 (614)
Q Consensus 442 -------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllEllt 505 (614)
++.+||+|||+++..... .....||+.|+| |. ...++.++|||||||++|||+|
T Consensus 185 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 254 (360)
T 3llt_A 185 VTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----------HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254 (360)
T ss_dssp TTTCCEEEEEEESCCCEEECCCTTCEETTSC----------CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCEEEEeccCceecCCC----------CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH
Confidence 789999999999865432 224679999977 87 6678999999999999999999
Q ss_pred CCCCCCcc
Q 046036 506 GKRPTDEM 513 (614)
Q Consensus 506 G~~p~~~~ 513 (614)
|+.||...
T Consensus 255 g~~pf~~~ 262 (360)
T 3llt_A 255 GSLLFRTH 262 (360)
T ss_dssp SSCSCCCS
T ss_pred CCCCCCCC
Confidence 99999753
No 268
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=1.6e-20 Score=184.11 Aligned_cols=170 Identities=22% Similarity=0.285 Sum_probs=114.6
Q ss_pred CCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCC
Q 046036 10 LFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNL 89 (614)
Q Consensus 10 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L 89 (614)
+.++..+++++|.+++.. .+..+++|++|++++|+++ .+| . +..++ +|++|+|++|++++..+ +..+++|
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~---l~~l~-~L~~L~L~~N~i~~~~~--l~~l~~L 87 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-G---MQFFT-NLKELHLSHNQISDLSP--LKDLTKL 87 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-T---GGGCT-TCCEEECCSSCCCCCGG--GTTCSSC
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-H---HhhCC-CCCEEECCCCccCCChh--hccCCCC
Confidence 556677777777777443 5677778888888888777 344 3 56666 77788888888774433 7777788
Q ss_pred CEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCC
Q 046036 90 IQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGL 169 (614)
Q Consensus 90 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 169 (614)
++|+|++|++++ +|.. .. ++|+.|+ |++|++++. +.+..+++|++|+|++|++++. + .+..
T Consensus 88 ~~L~L~~N~l~~-l~~~-~~-~~L~~L~------------L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~ 148 (263)
T 1xeu_A 88 EELSVNRNRLKN-LNGI-PS-ACLSRLF------------LDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGF 148 (263)
T ss_dssp CEEECCSSCCSC-CTTC-CC-SSCCEEE------------CCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGG
T ss_pred CEEECCCCccCC-cCcc-cc-CcccEEE------------ccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHcc
Confidence 888888887774 3322 22 5565555 777777753 3477777777777777777743 3 4666
Q ss_pred CCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCC
Q 046036 170 FSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDE 210 (614)
Q Consensus 170 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 210 (614)
+++|+.|++++|.|++. ..+..+++|+.|++++|.++..
T Consensus 149 l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 149 LSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 77777777777777654 4566677777777777776644
No 269
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.80 E-value=8.6e-20 Score=186.83 Aligned_cols=171 Identities=16% Similarity=0.131 Sum_probs=111.8
Q ss_pred CCCCceeEEecccCCCchhhhccCCC-------------------------------------CCcccCHHHHHHHHhhC
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNE-------------------------------------ATRRLDLAEGLKIAVDI 433 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~-------------------------------------~~~~l~~~~~~~ia~~i 433 (614)
..++..++|||||++|+|.+++.... ....+++.....++.++
T Consensus 98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 177 (345)
T 3hko_A 98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177 (345)
T ss_dssp ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 45677899999999999999985210 01123455555566555
Q ss_pred ------------------CCceeeCCCC--CeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc----cCCCC
Q 046036 434 ------------------PSNVLLDYDM--TAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW----VARYQ 488 (614)
Q Consensus 434 ------------------~~NILld~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~----~~~~~ 488 (614)
|+||+++.++ .+||+|||+++.+...... .........||+.|+| |. ...++
T Consensus 178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 254 (345)
T 3hko_A 178 FSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG---EYYGMTTKAGTPYFVAPEVLNTTNESYG 254 (345)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-----------CCCGGGCCHHHHTCSSSCCC
T ss_pred HHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc---ccccccccCCCccccCchhhccCCCCCC
Confidence 9999998766 8999999999876432211 0112345679999977 86 26788
Q ss_pred ccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHH
Q 046036 489 HKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRI 568 (614)
Q Consensus 489 ~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i 568 (614)
.++|||||||+++||+||+.||..... .+.....+.............. ...+.++
T Consensus 255 ~~~DiwslG~il~el~~g~~pf~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l 310 (345)
T 3hko_A 255 PKCDAWSAGVLLHLLLMGAVPFPGVND-----------------ADTISQVLNKKLCFENPNYNVL-------SPLARDL 310 (345)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSH-----------------HHHHHHHHHCCCCTTSGGGGGS-------CHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCCh-----------------HHHHHHHHhcccccCCcccccC-------CHHHHHH
Confidence 999999999999999999999975321 1122222222211111111111 1234456
Q ss_pred hhccCCCCccCCCCHHHHHH
Q 046036 569 GIASLTETPNERMGVREMVM 588 (614)
Q Consensus 569 ~~~C~~~~p~~RPsm~ev~~ 588 (614)
...|++.+|++||++.|+++
T Consensus 311 i~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 311 LSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHcCCChhHCCCHHHHhc
Confidence 77999999999999999986
No 270
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.80 E-value=7.9e-20 Score=187.78 Aligned_cols=166 Identities=20% Similarity=0.227 Sum_probs=116.6
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++|||||++|+|.+++... ..+++..+..++.++ |+|||++.++.+||+|||+
T Consensus 129 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 129 QTETKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EETTEEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eeCceEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 3456789999999999999999753 358888888877766 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc-c---CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-V---ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~---~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
++....... ......+||+.|+| |+ . ..++.++|||||||++|||+||+.||.......
T Consensus 206 a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~---------- 269 (355)
T 1vzo_A 206 SKEFVADET------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN---------- 269 (355)
T ss_dssp EEECCGGGG------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC----------
T ss_pred CeecccCCC------CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc----------
Confidence 987643321 22345689999977 87 2 347889999999999999999999997532211
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCC-----CHHHHHHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERM-----GVREMVME 589 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RP-----sm~ev~~~ 589 (614)
...++......... ..+. .. ...+.++...|++.+|++|| ++.|+++.
T Consensus 270 ---~~~~~~~~~~~~~~-~~~~---~~-------~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 270 ---SQAEISRRILKSEP-PYPQ---EM-------SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ---CHHHHHHHHHHCCC-CCCT---TS-------CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ---hHHHHHHHHhccCC-CCCc---cc-------CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11112222221111 1111 11 11234567799999999999 99999864
No 271
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.80 E-value=2e-20 Score=186.51 Aligned_cols=164 Identities=18% Similarity=0.201 Sum_probs=116.3
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCC--------
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMT-------- 444 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~-------- 444 (614)
..++..++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.
T Consensus 82 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 82 VCGDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CCTTCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred EeCCCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccce
Confidence 3456679999999999999999864 3348888888888777 99999998887
Q ss_pred eeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcccccCchH
Q 046036 445 AYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSL 520 (614)
Q Consensus 445 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l 520 (614)
+|++|||+++.... .....||+.|+| |. . ..++.++|||||||+++||+||..|+....... ..
T Consensus 160 ~kl~Dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-~~ 227 (289)
T 4fvq_A 160 IKLSDPGISITVLP-----------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-RK 227 (289)
T ss_dssp EEECCCCSCTTTSC-----------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HH
T ss_pred eeeccCcccccccC-----------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH-HH
Confidence 99999999865432 233568999977 87 3 678999999999999999999655543211110 00
Q ss_pred HHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHH
Q 046036 521 HNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKE 595 (614)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~ 595 (614)
. ..........+.. ...+.+++..|++.+|++|||+.|+++.|+++..
T Consensus 228 ~----------------~~~~~~~~~~~~~-----------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 228 L----------------QFYEDRHQLPAPK-----------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp H----------------HHHHTTCCCCCCS-----------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred H----------------HHhhccCCCCCCC-----------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 0 0111100000000 0123356679999999999999999999987754
No 272
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.79 E-value=1.3e-20 Score=192.79 Aligned_cols=163 Identities=20% Similarity=0.287 Sum_probs=109.3
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||| +.+|+|.+++... ..+++..+..++.++ |+|||++ ++.+||+|||+
T Consensus 79 ~~~~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~ 153 (343)
T 3dbq_A 79 ITDQYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI 153 (343)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSS
T ss_pred eeCCEEEEEEe-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeeccc
Confidence 34567899999 5678999999853 358888888888777 9999997 57899999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--c-----------CCCCccCceeehhHHHHHHHhCCCCCCcccccCc
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-----------ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCL 518 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-----------~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~ 518 (614)
++........ ......+||++|+| |+ . ..++.++|||||||++|||++|+.||.......
T Consensus 154 a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~- 227 (343)
T 3dbq_A 154 ANQMQPDTTS-----VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI- 227 (343)
T ss_dssp SCCC-----------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-
T ss_pred ccccCccccc-----ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-
Confidence 9877544321 12345689999977 87 2 578899999999999999999999997532211
Q ss_pred hHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 519 SLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 519 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
..+...+........... ....+.+++..|++.+|++||||.|+++
T Consensus 228 ---------------~~~~~~~~~~~~~~~~~~---------~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 228 ---------------SKLHAIIDPNHEIEFPDI---------PEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp ---------------HHHHHHHCTTSCCCCCCC---------SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---------------HHHHHHhcCCcccCCccc---------CCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 111111111111000000 0113346777999999999999999985
No 273
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.79 E-value=6.2e-20 Score=197.67 Aligned_cols=165 Identities=24% Similarity=0.310 Sum_probs=119.1
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++|||||++|+|.+++.... ...+++..+..++.++ |+|||++.++.+||+|||+
T Consensus 254 ~~~~~l~lVmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGl 332 (576)
T 2acx_A 254 ETKDALCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL 332 (576)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred eeCCEEEEEEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEeccc
Confidence 45677899999999999999997643 3358898888887777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++...... .....+||++|+| |. ...++.++|||||||++|||++|+.||........
T Consensus 333 a~~~~~~~--------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~----------- 393 (576)
T 2acx_A 333 AVHVPEGQ--------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----------- 393 (576)
T ss_dssp CEECCTTC--------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-----------
T ss_pred ceecccCc--------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-----------
Confidence 98765432 1334689999977 87 56789999999999999999999999976322110
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCC-----CHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERM-----GVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RP-----sm~ev~~ 588 (614)
.+.+...+.......+. .+. ..+.++...|++.+|++|| +++||++
T Consensus 394 ---~~~i~~~i~~~~~~~p~---~~s-------~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 394 ---REEVERLVKEVPEEYSE---RFS-------PQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ---HHHHHHHHHHCCCCCCT---TSC-------HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ---HHHHHHHhhcccccCCc---cCC-------HHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11111111111110110 111 1233566789999999999 7788874
No 274
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.79 E-value=6.1e-20 Score=187.87 Aligned_cols=157 Identities=21% Similarity=0.231 Sum_probs=113.3
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||++ |+|.+++... ...++|..+..++.++ |+|||++.++.+||+|||++
T Consensus 125 ~~~~~~lv~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 201 (348)
T 1u5q_A 125 REHTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSA 201 (348)
T ss_dssp ETTEEEEEEECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTC
T ss_pred ECCeEEEEEecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCc
Confidence 4567899999998 6898888642 2358898888888777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc-----cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-----VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-----~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
+..... ....||+.|+| |. ...++.++|||||||+++||+||+.||.....
T Consensus 202 ~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------------ 258 (348)
T 1u5q_A 202 SIMAPA-----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------------ 258 (348)
T ss_dssp BSSSSB-----------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------------
T ss_pred eecCCC-----------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------------
Confidence 866432 23579999977 86 35788999999999999999999999865321
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+.......... . ....+. + .+.++...|++.+|++|||+.|+++
T Consensus 259 -----~~~~~~~~~~~~~~-~-~~~~~~----~---~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 259 -----MSALYHIAQNESPA-L-QSGHWS----E---YFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp -----HHHHHHHHHSCCCC-C-CCTTSC----H---HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----HHHHHHHHhcCCCC-C-CCCCCC----H---HHHHHHHHHcccChhhCcCHHHHhh
Confidence 11111111111100 0 001111 1 2335667999999999999999985
No 275
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.79 E-value=1.5e-20 Score=190.73 Aligned_cols=192 Identities=14% Similarity=0.143 Sum_probs=115.9
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||++ |+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 70 ~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 146 (324)
T 3mtl_A 70 HTEKSLTLVFEYLD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGL 146 (324)
T ss_dssp ECSSCEEEEEECCS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSE
T ss_pred eeCCEEEEEecccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcc
Confidence 34567899999998 5999998754 2358888888777776 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh-
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA- 527 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~- 527 (614)
++...... .......||++|+| |. ...++.++||||+||+++||+||+.||........ +....+..
T Consensus 147 a~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~ 218 (324)
T 3mtl_A 147 ARAKSIPT-------KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ-LHFIFRILG 218 (324)
T ss_dssp EECC-------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHC
T ss_pred cccccCCc-------cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhC
Confidence 98655332 12334678999977 86 35689999999999999999999999976432211 11111111
Q ss_pred --CCCChHHHHH-HHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH--HHHHhH
Q 046036 528 --LPESVMELVY-SRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM--EMNVIK 594 (614)
Q Consensus 528 --~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~--~L~~i~ 594 (614)
.+........ ........+..... .........-..+.++...|++.+|++|||++|+++ .+..+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 289 (324)
T 3mtl_A 219 TPTEETWPGILSNEEFKTYNYPKYRAE-ALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG 289 (324)
T ss_dssp CCCTTTSTTGGGCHHHHHTCCCCCCCC-CHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred CCChHhchhhhcchhhcccccccccch-hhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence 0111110000 00000000000000 000000111223456778999999999999999986 444443
No 276
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.79 E-value=1.3e-19 Score=183.98 Aligned_cols=160 Identities=17% Similarity=0.182 Sum_probs=111.0
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++|||||++|+|.+++... ..+++.....++.++ |+|||++.++.+||+|||+
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 91 QTGGKLYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp ECSSCEEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 3456789999999999999999743 247777777776666 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++...... ......+||+.|+| |. ...++.++|||||||++|||++|+.||.....
T Consensus 168 ~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------------- 226 (327)
T 3a62_A 168 CKESIHDG-------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-------------- 226 (327)
T ss_dssp C-----------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------------
T ss_pred ccccccCC-------ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--------------
Confidence 98654332 12334689999977 87 66789999999999999999999999975321
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCC-----CHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERM-----GVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RP-----sm~ev~~ 588 (614)
.+.+...+...... |. ... ..+.++...|++.+|++|| ++.|+++
T Consensus 227 ---~~~~~~i~~~~~~~-p~---~~~-------~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 227 ---KKTIDKILKCKLNL-PP---YLT-------QEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ---HHHHHHHHHTCCCC-CT---TSC-------HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ---HHHHHHHHhCCCCC-CC---CCC-------HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11222222221111 11 111 1233566789999999999 6777765
No 277
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.79 E-value=1.4e-19 Score=184.89 Aligned_cols=112 Identities=21% Similarity=0.317 Sum_probs=93.2
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++|||||++|+|.+++... ..+++..+..++.++ |+|||++.++.+||+|||+
T Consensus 80 ~~~~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~ 156 (345)
T 3a8x_A 80 QTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156 (345)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGG
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccc
Confidence 3456789999999999999999743 358888888877776 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCc
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDE 512 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~ 512 (614)
++...... ......+||+.|+| |. ...++.++||||+||++|||++|+.||..
T Consensus 157 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 157 CKEGLRPG-------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp CBCSCCTT-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCCC-------CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 98643322 12445789999977 87 66789999999999999999999999964
No 278
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.79 E-value=1.4e-19 Score=179.74 Aligned_cols=163 Identities=20% Similarity=0.238 Sum_probs=116.3
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCC---eeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMT---AYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~---~kl~D 449 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++. +||+|
T Consensus 75 ~~~~~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~D 151 (284)
T 3kk8_A 75 QEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLAD 151 (284)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECC
T ss_pred EcCCEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEee
Confidence 3456789999999999999998753 358888888887777 99999987655 99999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
||++....... ......||++|+| |. ...++.++||||+||+++||++|+.||......
T Consensus 152 fg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---------- 213 (284)
T 3kk8_A 152 FGLAIEVNDSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---------- 213 (284)
T ss_dssp CTTCEECCSSC--------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----------
T ss_pred ceeeEEcccCc--------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh----------
Confidence 99998765432 1234679999977 87 667899999999999999999999999653211
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+.................... ...+.++...|++.+|++|||+.|+++
T Consensus 214 -------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 214 -------RLYAQIKAGAYDYPSPEWDTV-------TPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp -------HHHHHHHHTCCCCCTTTTTTS-------CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -------HHHHHHHhccccCCchhhccc-------CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111111111111111110111 122345677999999999999999986
No 279
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.79 E-value=7.3e-20 Score=190.95 Aligned_cols=116 Identities=22% Similarity=0.278 Sum_probs=94.4
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccc
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfG 451 (614)
+..++..|+|||||++|+|.+++... +..+++..+..++.++ |+|||+|.++++||+|||
T Consensus 130 ~~~~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 130 FQDENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp EECSSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EeeCCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeech
Confidence 34567789999999999999999753 2358888777777666 999999999999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc-c--------CCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-V--------ARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~--------~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
+++....... ......+||++|+| |+ . ..++.++|||||||++|||+||+.||...
T Consensus 208 la~~~~~~~~------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 273 (412)
T 2vd5_A 208 SCLKLRADGT------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD 273 (412)
T ss_dssp TCEECCTTSC------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred hheeccCCCc------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC
Confidence 9987654321 12334689999977 87 2 36899999999999999999999999753
No 280
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.79 E-value=6.8e-20 Score=190.58 Aligned_cols=163 Identities=21% Similarity=0.315 Sum_probs=110.8
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||| +.+|+|.+++.... .+++..+..++.++ |+|||++ ++.+||+|||+
T Consensus 126 ~~~~~~~lv~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~ 200 (390)
T 2zmd_A 126 ITDQYIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI 200 (390)
T ss_dssp ECSSEEEEEEE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSS
T ss_pred ecCCEEEEEEe-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCc
Confidence 34567899999 67889999998542 57888888887777 9999996 57899999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc-c------------CCCCccCceeehhHHHHHHHhCCCCCCcccccCc
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-V------------ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCL 518 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~------------~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~ 518 (614)
++.+...... ......+||+.|+| |+ . ..++.++|||||||++|||++|+.||......
T Consensus 201 a~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-- 273 (390)
T 2zmd_A 201 ANQMQPDTTS-----VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-- 273 (390)
T ss_dssp SCCC--------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--
T ss_pred cccccCCCcc-----ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH--
Confidence 9877543221 12334689999977 87 2 26889999999999999999999999753211
Q ss_pred hHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 519 SLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 519 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
...+...+............ ...+.+++..|++.+|++|||+.||++
T Consensus 274 --------------~~~~~~~~~~~~~~~~~~~~---------~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 274 --------------ISKLHAIIDPNHEIEFPDIP---------EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp --------------HHHHHHHHCTTSCCCCCCCS---------CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --------------HHHHHHHhCccccCCCCccc---------hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 01111111111111000000 113446777999999999999999985
No 281
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.79 E-value=4.4e-20 Score=190.24 Aligned_cols=110 Identities=24% Similarity=0.356 Sum_probs=88.8
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC-------------------CCceeeCCCCCeeeccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI-------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i-------------------~~NILld~~~~~kl~DfGl 452 (614)
.++..++||||+++|+|.+++... ..+++..+.+++.++ |+||+++.++.+||+|||+
T Consensus 102 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 178 (360)
T 3eqc_A 102 SDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV 178 (360)
T ss_dssp ETTEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCC
T ss_pred ECCEEEEEEECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCC
Confidence 356789999999999999999753 247777777766555 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
++...... .....||+.|+| |. ...++.++|||||||+++||+||+.||...
T Consensus 179 ~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 179 SGQLIDSM---------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp CHHHHHHC-------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred Cccccccc---------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 97654321 234679999977 87 667899999999999999999999999753
No 282
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.79 E-value=1.8e-19 Score=193.53 Aligned_cols=116 Identities=22% Similarity=0.313 Sum_probs=96.1
Q ss_pred CCCCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfG 451 (614)
..++..++|||||++|+|.+++.... ....+++.....++.++ |+|||++.++.+||+|||
T Consensus 255 ~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFG 334 (543)
T 3c4z_A 255 ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLG 334 (543)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecc
Confidence 44667899999999999999997543 23468888888777776 999999999999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
+++.+..... .....+||+.|+| |. ...++.++||||+||++|||+||+.||...
T Consensus 335 la~~~~~~~~-------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 335 LAVELKAGQT-------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp TCEECCTTCC-------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred eeeeccCCCc-------ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 9987654321 2334689999977 87 667899999999999999999999999753
No 283
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.79 E-value=1.5e-19 Score=179.59 Aligned_cols=170 Identities=17% Similarity=0.202 Sum_probs=118.4
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCC----Ceeec
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDM----TAYVG 448 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~----~~kl~ 448 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++ .+||+
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~ 154 (283)
T 3bhy_A 78 ENKTDVVLILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLI 154 (283)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEEC
T ss_pred cCCCeEEEEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEE
Confidence 3456789999999999999999743 358898888888877 9999999877 89999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
|||+++...... ......||+.|+| |. ...++.++||||||++++||++|+.||......
T Consensus 155 dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------- 217 (283)
T 3bhy_A 155 DFGIAHKIEAGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--------- 217 (283)
T ss_dssp CCTTCEECC----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH---------
T ss_pred ecccceeccCCC--------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH---------
Confidence 999998765432 1234679999977 87 567899999999999999999999999753211
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH--HHHHhHH
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM--EMNVIKE 595 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~--~L~~i~~ 595 (614)
+............. .. ........+.++...|++.+|++|||+.|+++ .++.++.
T Consensus 218 --------~~~~~~~~~~~~~~----~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 218 --------ETLTNISAVNYDFD----EE---YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp --------HHHHHHHTTCCCCC----HH---HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred --------HHHHHhHhcccCCc----ch---hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 11111111100000 00 00111223456778999999999999999996 4555543
No 284
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.79 E-value=9.8e-20 Score=185.61 Aligned_cols=176 Identities=20% Similarity=0.183 Sum_probs=109.3
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------CCceeeCCCCCeeecccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------~~NILld~~~~~kl~DfG 451 (614)
.....++||||++ |+|.+++........++|..+..++.++ |+|||++.++.+||+|||
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 3456799999997 7999998653233468999888887766 899999999999999999
Q ss_pred cccccCCCCCCCCCC-----CcCcccccccccccc-cc-----cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchH
Q 046036 452 LARFLPTNVTNPMKG-----QSNSAAVWGSIGYNM-EW-----VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSL 520 (614)
Q Consensus 452 la~~~~~~~~~~~~~-----~~~~~~~~gt~~y~a-E~-----~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l 520 (614)
+++............ ........||+.|+| |. ...++.++|||||||++|||+||+.||......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---- 259 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL---- 259 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH----
Confidence 998776432210000 001124569999976 75 345788999999999999999999999642111
Q ss_pred HHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhh
Q 046036 521 HNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLL 598 (614)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~ 598 (614)
+...... ...+... ....+.+++..|++.+|++|||+.|+++.|+.+.....
T Consensus 260 -------------~~~~~~~----~~~~~~~---------~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 260 -------------RIVNGKY----SIPPHDT---------QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp -------------------C----CCCTTCC---------SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -------------HhhcCcc----cCCcccc---------cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 0010100 0000000 00113356779999999999999999999999887543
No 285
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.79 E-value=1.6e-19 Score=179.02 Aligned_cols=159 Identities=19% Similarity=0.218 Sum_probs=113.0
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
...+..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 79 ~~~~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~ 155 (279)
T 3fdn_A 79 HDATRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGW 155 (279)
T ss_dssp ECSSEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCE
T ss_pred ecCCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccc
Confidence 3456789999999999999999743 358888888887777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+....... .....||+.|+| |. ...++.++||||+|++++||++|+.||.....
T Consensus 156 ~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------------- 212 (279)
T 3fdn_A 156 SVHAPSSR---------RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-------------- 212 (279)
T ss_dssp ESCC-----------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------------
T ss_pred cccCCccc---------ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH--------------
Confidence 86544321 234679999977 87 66778999999999999999999999975321
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVME 589 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 589 (614)
.+.......... ..+.. . ...+.++...|++.+|++|||+.|+++.
T Consensus 213 ---~~~~~~~~~~~~-~~~~~---~-------~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 213 ---QETYKRISRVEF-TFPDF---V-------TEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ---HHHHHHHHHTCC-CCCTT---S-------CHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ---HHHHHHHHhCCC-CCCCc---C-------CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111111111111 00100 0 1123356779999999999999999974
No 286
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.79 E-value=1.4e-20 Score=195.10 Aligned_cols=158 Identities=12% Similarity=0.130 Sum_probs=111.9
Q ss_pred eeEEecccCCCchhhhccCCC----CCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 396 KALAFEFMPNGSLESWLHPNE----ATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 396 ~~LV~Ey~~~GsL~~~L~~~~----~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++||||+ +|+|.+++...+ ....++|..+.+|+.++ |+|||++.++.+||+|||++
T Consensus 175 ~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a 253 (377)
T 3byv_A 175 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL 253 (377)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred EEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhh
Confidence 68999999 689999997432 12345678888787777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cC-----------CCCccCceeehhHHHHHHHhCCCCCCcccccCch
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VA-----------RYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLS 519 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~-----------~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~ 519 (614)
+.... .....+| +.|+| |. .. .++.++|||||||++|||+||+.||.........
T Consensus 254 ~~~~~----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~ 322 (377)
T 3byv_A 254 VRDGA----------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGS 322 (377)
T ss_dssp EETTC----------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCS
T ss_pred eecCC----------cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccch
Confidence 85432 1334677 99977 87 44 7999999999999999999999999753221100
Q ss_pred HHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH--HHHHhHHHh
Q 046036 520 LHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM--EMNVIKEVL 597 (614)
Q Consensus 520 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~--~L~~i~~~~ 597 (614)
. .+..... .....+.+++..|++.+|++|||+.|+++ .++++++..
T Consensus 323 --~----------------~~~~~~~--------------~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~ 370 (377)
T 3byv_A 323 --E----------------WIFRSCK--------------NIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTEL 370 (377)
T ss_dssp --G----------------GGGSSCC--------------CCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHHHH
T ss_pred --h----------------hhhhhcc--------------CCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHHHH
Confidence 0 0000000 00112345677999999999999999996 566665543
No 287
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.79 E-value=1.1e-19 Score=186.99 Aligned_cols=164 Identities=17% Similarity=0.208 Sum_probs=106.3
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCC--eeecccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMT--AYVGDFG 451 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~--~kl~DfG 451 (614)
.++..++|||||++|+|.+++... ..+++..+..++.++ |+|||++.++. +||+|||
T Consensus 87 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 87 TPTHLAIIMEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred eCCEEEEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 466789999999999999999743 358888888887777 99999987765 9999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCcc-CceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHK-GKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k-~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
+++...... ......||++|+| |. ...++.+ +||||+||++|||++|+.||.......
T Consensus 164 ~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---------- 225 (361)
T 3uc3_A 164 YSKSSVLHS--------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR---------- 225 (361)
T ss_dssp CC-----------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC----------
T ss_pred ccccccccC--------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH----------
Confidence 997543321 2334679999977 87 4555444 899999999999999999997532211
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.....+...+.......... .. ...+.++...|++.+|++|||+.|+++
T Consensus 226 ---~~~~~~~~~~~~~~~~~~~~--~~-------s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 226 ---DYRKTIQRILSVKYSIPDDI--RI-------SPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp ---CHHHHHHHHHTTCCCCCTTS--CC-------CHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ---HHHHHHHHHhcCCCCCCCcC--CC-------CHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 11222222222211111100 01 122345777999999999999999986
No 288
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.79 E-value=9.7e-20 Score=184.11 Aligned_cols=115 Identities=26% Similarity=0.379 Sum_probs=91.5
Q ss_pred CCCCceeEEecccCCCchhhhccCCC---CCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNE---ATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~---~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~D 449 (614)
..++..++||||++ |+|.+++.... ....+++..+..++.++ |+|||++.++.+||+|
T Consensus 73 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~D 151 (317)
T 2pmi_A 73 HTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGD 151 (317)
T ss_dssp CCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECC
T ss_pred EECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECc
Confidence 34567899999999 59999986421 22358888887777666 9999999999999999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
||+++....... ......||+.|+| |. . ..++.++|||||||+++||+||+.||...
T Consensus 152 fg~~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 152 FGLARAFGIPVN-------TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp CSSCEETTSCCC-------CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CccceecCCCcc-------cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999987654321 1334678999977 87 2 46899999999999999999999999754
No 289
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.79 E-value=2e-19 Score=186.85 Aligned_cols=109 Identities=25% Similarity=0.239 Sum_probs=89.5
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------------CCceeeC--CCCCeeeccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------------PSNVLLD--YDMTAYVGDF 450 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------------~~NILld--~~~~~kl~Df 450 (614)
++..++||||++ |+|.+++.... ...+++..+..++.++ |+|||++ .++.+||+||
T Consensus 128 ~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 128 RNHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp TTEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred CCceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence 567899999997 59999997642 2358888888877766 9999994 5788999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
|+++..... .....||+.|+| |. ...++.++|||||||+++||+||+.||...
T Consensus 206 G~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 206 GSSCQLGQR----------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCEETTCC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCceecccc----------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999876532 234679999977 87 567899999999999999999999999864
No 290
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.79 E-value=1.7e-19 Score=193.77 Aligned_cols=168 Identities=16% Similarity=0.193 Sum_probs=120.4
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCC---CCeeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYD---MTAYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~---~~~kl~D 449 (614)
..++..++|||||++|+|.+++... ..+++..+..++.++ |+|||++.. +.+||+|
T Consensus 106 ~~~~~~~lv~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 182 (494)
T 3lij_A 106 EDKRNYYLVMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVD 182 (494)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred EeCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEE
Confidence 4566789999999999999998743 358888888887777 999999764 5599999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
||+++...... .....+||+.|+| |. ...++.++||||+||++|||++|+.||.....
T Consensus 183 fG~a~~~~~~~--------~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------------ 242 (494)
T 3lij_A 183 FGLSAVFENQK--------KMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTD------------ 242 (494)
T ss_dssp CTTCEECBTTB--------CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------------
T ss_pred CCCCeECCCCc--------cccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCH------------
Confidence 99998765432 2344679999977 87 77899999999999999999999999975321
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH--HHHHh
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM--EMNVI 593 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~--~L~~i 593 (614)
.+.+................... ..+.++...|++.+|++|||+.|+++ .+++.
T Consensus 243 -----~~~~~~i~~~~~~~~~~~~~~~s-------~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 243 -----QEILRKVEKGKYTFDSPEWKNVS-------EGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp -----HHHHHHHHHTCCCCCSGGGTTSC-------HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred -----HHHHHHHHhCCCCCCchhcccCC-------HHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 12222222222211111111111 22345667999999999999999985 35443
No 291
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.79 E-value=5.7e-20 Score=183.71 Aligned_cols=165 Identities=19% Similarity=0.229 Sum_probs=113.8
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCC-CCCeeeccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDY-DMTAYVGDFGL 452 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~-~~~~kl~DfGl 452 (614)
..+..++||||+++|+|.+++........+++..+..++.++ |+||+++. ++.+||+|||+
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~ 169 (295)
T 2clq_A 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGT 169 (295)
T ss_dssp ETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTT
T ss_pred eCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeeccc
Confidence 356789999999999999999865434456777777766665 99999997 89999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--c--CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V--ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~--~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
++....... ......||+.|+| |. . ..++.++|||||||++|||+||+.||........
T Consensus 170 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------- 233 (295)
T 2clq_A 170 SKRLAGINP-------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA--------- 233 (295)
T ss_dssp CEESCC------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH---------
T ss_pred ccccCCCCC-------cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH---------
Confidence 987654321 1234679999977 87 2 2478999999999999999999999964211100
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
..............+ ... ...+.++...|++.+|++||++.|++.
T Consensus 234 ------~~~~~~~~~~~~~~~---~~~-------~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 234 ------AMFKVGMFKVHPEIP---ESM-------SAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ------HHHHHHHHCCCCCCC---TTS-------CHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ------HHHhhcccccccccc---ccC-------CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000011111100001 011 123345677999999999999999874
No 292
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.79 E-value=1.4e-19 Score=179.37 Aligned_cols=160 Identities=19% Similarity=0.287 Sum_probs=100.8
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||++
T Consensus 82 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 159 (278)
T 3cok_A 82 DSNYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA 159 (278)
T ss_dssp CSSEEEEEEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTC
T ss_pred cCCeEEEEEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecce
Confidence 456789999999999999999854 2458888888888877 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
+....... ......||+.|+| |. ...++.++|||||||+++||+||+.||........
T Consensus 160 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------------ 220 (278)
T 3cok_A 160 TQLKMPHE-------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT------------ 220 (278)
T ss_dssp EECC-----------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------
T ss_pred eeccCCCC-------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH------------
Confidence 87653321 1234679999976 87 56788999999999999999999999975321110
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.......... .+ ... ...+.++...|++.+|++|||+.|+++
T Consensus 221 -----~~~~~~~~~~-~~---~~~-------~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 221 -----LNKVVLADYE-MP---SFL-------SIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp --------CCSSCCC-CC---TTS-------CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----HHHHhhcccC-Cc---ccc-------CHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0000000000 00 001 112345777999999999999999885
No 293
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.79 E-value=1.6e-19 Score=193.77 Aligned_cols=163 Identities=19% Similarity=0.239 Sum_probs=119.5
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceee---CCCCCeeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLL---DYDMTAYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILl---d~~~~~kl~D 449 (614)
...+..++|||||++|+|.+++... ..+++..+..++.++ |+|||+ +.++.+||+|
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 172 (484)
T 3nyv_A 96 EDKGYFYLVGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 172 (484)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred EeCCEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEe
Confidence 3466789999999999999999754 358888888888877 999999 5678999999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
||+++...... .....+||++|+| |. .+.++.++||||+||++|||++|+.||.....
T Consensus 173 fg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------------ 232 (484)
T 3nyv_A 173 FGLSTHFEASK--------KMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANE------------ 232 (484)
T ss_dssp TTHHHHBCCCC--------SHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------------
T ss_pred eeeeEEccccc--------ccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCH------------
Confidence 99998765432 2345789999977 87 66799999999999999999999999975321
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+............+...... ..+.++...|++.+|++|||+.|+++
T Consensus 233 -----~~~~~~i~~~~~~~~~~~~~~~s-------~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 233 -----YDILKKVEKGKYTFELPQWKKVS-------ESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp -----HHHHHHHHHCCCCCCSGGGGGSC-------HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----HHHHHHHHcCCCCCCCcccccCC-------HHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 11222222222111111111111 22345667999999999999999985
No 294
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.78 E-value=3e-19 Score=191.60 Aligned_cols=163 Identities=18% Similarity=0.219 Sum_probs=117.1
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeC---CCCCeeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLD---YDMTAYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld---~~~~~kl~D 449 (614)
...+..++|||||++|+|.+++... ..+++..+..++.++ |+|||++ .++.+||+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 167 (486)
T 3mwu_A 91 EDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIID 167 (486)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECS
T ss_pred EcCCEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEE
Confidence 4467789999999999999998753 358888888888777 9999995 456799999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
||+++...... .....+||+.|+| |. .+.++.++||||+||++|||++|+.||.....
T Consensus 168 fg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------------ 227 (486)
T 3mwu_A 168 FGLSTCFQQNT--------KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE------------ 227 (486)
T ss_dssp CSCTTTBCCC------------CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------------
T ss_pred CCcCeECCCCC--------ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------------
Confidence 99998765432 2334679999977 87 66799999999999999999999999975321
Q ss_pred CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 528 LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+............+...... ..+.++...|++.+|++|||+.|+++
T Consensus 228 -----~~~~~~i~~~~~~~~~~~~~~~s-------~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 228 -----YDILKRVETGKYAFDLPQWRTIS-------DDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp -----HHHHHHHHHTCCCSCSGGGGGSC-------HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -----HHHHHHHHhCCCCCCCcccCCCC-------HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11222222222211111111111 22345677999999999999999986
No 295
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.78 E-value=2.1e-19 Score=182.98 Aligned_cols=155 Identities=21% Similarity=0.240 Sum_probs=116.2
Q ss_pred CCCCCceeEEecccCCC-chhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccc
Q 046036 390 SGGNDFKALAFEFMPNG-SLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDF 450 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~G-sL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~Df 450 (614)
+..++..++||||+..| +|.+++... ..+++..+..|+.++ |+|||++.++.+||+||
T Consensus 98 ~~~~~~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 98 FENQGFFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp EECSSEEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCC
T ss_pred EeeCCEEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeec
Confidence 34567789999999888 999999754 358999888888877 99999999999999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCC-CccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARY-QHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~-~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
|+++...... ......||+.|+| |. ...+ +.++|||||||++|||++|+.||.......
T Consensus 175 g~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------- 237 (335)
T 3dls_A 175 GSAAYLERGK--------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV--------- 237 (335)
T ss_dssp TTCEECCTTC--------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT---------
T ss_pred ccceECCCCC--------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH---------
Confidence 9998775442 2344679999977 87 3444 789999999999999999999997522100
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVME 589 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 589 (614)
.... ..+.. . ...+.++...|++.+|++|||+.|+++.
T Consensus 238 --------------~~~~-~~~~~---~-------~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 238 --------------EAAI-HPPYL---V-------SKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --------------TTCC-CCSSC---C-------CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --------------hhcc-CCCcc---c-------CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00000 0 1123456678999999999999999873
No 296
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.78 E-value=4.5e-20 Score=182.89 Aligned_cols=164 Identities=25% Similarity=0.263 Sum_probs=115.8
Q ss_pred CCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC-----------------------CCceeeCCCCCeeec
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI-----------------------PSNVLLDYDMTAYVG 448 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i-----------------------~~NILld~~~~~kl~ 448 (614)
++..++||||+++|+|.+++.... ....+++..+.+++.++ |+||+++.++.+||+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~ 158 (279)
T 2w5a_A 79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG 158 (279)
T ss_dssp GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEEC
T ss_pred CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEe
Confidence 456899999999999999997532 23348888887776654 899999999999999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
|||+++...... .......||+.|+| |. ...++.++||||||++++||+||+.||.....
T Consensus 159 dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------- 221 (279)
T 2w5a_A 159 DFGLARILNHDT-------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ---------- 221 (279)
T ss_dssp CCCHHHHC---C-------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH----------
T ss_pred cCchheeecccc-------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH----------
Confidence 999998765432 11234679999977 87 66789999999999999999999999975321
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHH
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEM 590 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L 590 (614)
.+.............+.. ....+.++...|++.+|++|||+.||++.+
T Consensus 222 -------~~~~~~i~~~~~~~~~~~----------~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 222 -------KELAGKIREGKFRRIPYR----------YSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp -------HHHHHHHHHTCCCCCCTT----------SCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred -------HHHHHHHhhcccccCCcc----------cCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 111111111111111110 112344567799999999999999999765
No 297
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.78 E-value=1.7e-19 Score=181.03 Aligned_cols=160 Identities=22% Similarity=0.258 Sum_probs=117.3
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++.. ..+++..+..++.++ |+||+++.++.+||+|||++
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 166 (303)
T 3a7i_A 91 KDTKLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 166 (303)
T ss_dssp ETTEEEEEEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred cCCeEEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccc
Confidence 35668999999999999999974 258898888888777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
+....... ......||+.|+| |. ...++.++|||||||+++||++|+.||...... ..
T Consensus 167 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~---------- 227 (303)
T 3a7i_A 167 GQLTDTQI-------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KV---------- 227 (303)
T ss_dssp EECBTTBC-------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HH----------
T ss_pred eecCcccc-------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HH----------
Confidence 87654321 2334679999977 87 667889999999999999999999999753211 00
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVME 589 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 589 (614)
............+ ... ...+.++...|++.+|++|||+.|+++.
T Consensus 228 -----~~~~~~~~~~~~~---~~~-------~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 228 -----LFLIPKNNPPTLE---GNY-------SKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp -----HHHHHHSCCCCCC---SSC-------CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred -----HHHhhcCCCCCCc---ccc-------CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000111100000 001 1224467779999999999999999874
No 298
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.78 E-value=5.3e-20 Score=187.28 Aligned_cols=187 Identities=17% Similarity=0.118 Sum_probs=116.7
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 170 (331)
T 4aaa_A 94 KKKKRWYLVFEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGF 170 (331)
T ss_dssp EETTEEEEEEECCSEEHHHHHHHST---TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred ecCCEEEEEEecCCcchHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCC
Confidence 3456789999999999999987643 358888888888777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++....... ......||++|+| |. . ..++.++||||+||+++||+||+.||....... .+........
T Consensus 171 ~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~ 242 (331)
T 4aaa_A 171 ARTLAAPGE-------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLG 242 (331)
T ss_dssp C-------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred ceeecCCcc-------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhC
Confidence 987654321 2334679999977 87 2 368899999999999999999999997643211 1111111111
Q ss_pred C--CChHHHHHHH--HhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 P--ESVMELVYSR--LLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~--~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
. ....+.+... ..+...+....+.............+.+++..|++.+|++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 243 NLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp SCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1 0111111110 1111101111111111111122344567788999999999999999986
No 299
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=3.4e-19 Score=166.85 Aligned_cols=152 Identities=18% Similarity=0.251 Sum_probs=75.6
Q ss_pred CCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCC
Q 046036 9 NLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFN 88 (614)
Q Consensus 9 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~ 88 (614)
++++|+.|++++|.++ .+| .+..+++|++|++++|.++. + .. +..++ +|++|++++|.+++..|..+..+++
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~-~-~~---l~~l~-~L~~L~l~~n~l~~~~~~~l~~l~~ 113 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN-Y-NP---ISGLS-NLERLRIMGKDVTSDKIPNLSGLTS 113 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC-C-GG---GTTCT-TCCEEEEECTTCBGGGSCCCTTCTT
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc-c-hh---hhcCC-CCCEEEeECCccCcccChhhcCCCC
Confidence 3445555555555555 333 35555555555555554431 1 12 44444 5555555555555444555555555
Q ss_pred CCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCc-cccccchhhhccCCCCeeecccccCCCCCCCCC
Q 046036 89 LIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENN-LTGNIPESLENLTSLQILNLSCNHLGGSIPKPS 167 (614)
Q Consensus 89 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 167 (614)
|++|+|++|++++..|..++.+++|++|+ |++|. ++ .+| .+..+++|++|++++|++++ ++ .+
T Consensus 114 L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~------------L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l 177 (197)
T 4ezg_A 114 LTLLDISHSAHDDSILTKINTLPKVNSID------------LSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GI 177 (197)
T ss_dssp CCEEECCSSBCBGGGHHHHTTCSSCCEEE------------CCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TG
T ss_pred CCEEEecCCccCcHhHHHHhhCCCCCEEE------------ccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-Hh
Confidence 55555555555544455555555555444 55554 33 233 35555555555555555553 22 44
Q ss_pred CCCCCCCEEEcCCCCCc
Q 046036 168 GLFSTLSSIDFAHNNFN 184 (614)
Q Consensus 168 ~~l~~L~~L~Ls~N~l~ 184 (614)
..+++|+.|++++|+|.
T Consensus 178 ~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 178 EDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp GGCSSCCEEEECBC---
T ss_pred ccCCCCCEEEeeCcccC
Confidence 45555555555555543
No 300
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.78 E-value=1.7e-19 Score=194.39 Aligned_cols=164 Identities=20% Similarity=0.260 Sum_probs=119.3
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCC---Ceeec
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDM---TAYVG 448 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~---~~kl~ 448 (614)
+..++..++|||||++|+|.+++... ..+++..+..++.++ |+|||++.++ .+||+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEE
Confidence 34567789999999999999999753 358899888888877 9999999775 69999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
|||+++...... .....+||+.|+| |. ...++.++||||+||++|||++|+.||.....
T Consensus 192 Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----------- 252 (504)
T 3q5i_A 192 DFGLSSFFSKDY--------KLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQND----------- 252 (504)
T ss_dssp CCTTCEECCTTS--------CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------
T ss_pred ECCCCEEcCCCC--------ccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----------
Confidence 999998775432 2344679999977 87 67799999999999999999999999975321
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+............. . .......+.++...|++.+|.+|||++|+++
T Consensus 253 ------~~~~~~i~~~~~~~~~~---~----~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 253 ------QDIIKKVEKGKYYFDFN---D----WKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp ------HHHHHHHHHCCCCCCHH---H----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------HHHHHHHHcCCCCCCcc---c----cCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11111111111110000 0 0011123445677999999999999999985
No 301
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.78 E-value=2e-19 Score=184.53 Aligned_cols=189 Identities=15% Similarity=0.138 Sum_probs=119.4
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
++..++||||+++ +|.+.+... ...+++..+..++.++ |+|||++.++.+||+|||+++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 4568999999996 888877653 2358899888888877 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH--hhC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE--MAL 528 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~--~~~ 528 (614)
........ .........||++|+| |. ...++.++|||||||+++||+||+.||........ +..... ...
T Consensus 173 ~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~ 248 (351)
T 3mi9_A 173 AFSLAKNS---QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LALISQLCGSI 248 (351)
T ss_dssp ECCCCSSS---SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCC
T ss_pred cccccccc---cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCC
Confidence 76533221 1122345689999977 86 34579999999999999999999999976432111 111111 111
Q ss_pred CCC-hHHHHHHHHhcCcCCCCCCchhhHHHHHH--HHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 PES-VMELVYSRLLQGVDKDAEDEPCMKAKIRE--CLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+.. ....-........................ .-..+.++...|++.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 111 11000000001110001111111111111 0123567888999999999999999986
No 302
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.78 E-value=1.8e-19 Score=178.24 Aligned_cols=158 Identities=18% Similarity=0.243 Sum_probs=103.6
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+ +|+|.+++... ..+++..+.+++.++ |+||++++++.+||+|||+
T Consensus 83 ~~~~~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 158 (275)
T 2eue_A 83 KSKDEIIMVIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL 158 (275)
T ss_dssp ECSSCEEEEEECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSC
T ss_pred ecCCeEEEEehhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeeccc
Confidence 3456789999999 67888888753 358888888888877 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCC-CCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VAR-YQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~-~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++...... ......||+.|+| |. ... .+.++||||+||+++||+||+.||.....
T Consensus 159 ~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------- 217 (275)
T 2eue_A 159 SNIMTDGN--------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------------- 217 (275)
T ss_dssp C-----------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-------------
T ss_pred ceeccCcc--------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-------------
Confidence 98765432 1234679999977 87 333 37899999999999999999999975321
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
............ ..+.. . ...+.++...|++.+|++|||+.|+++
T Consensus 218 ----~~~~~~~~~~~~-~~~~~---~-------~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 218 ----PVLFKNISNGVY-TLPKF---L-------SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ----HHHHHHHHHTCC-CCCTT---S-------CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----HHHHHHHHhCCC-CCCcc---C-------CHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 111111111111 11110 1 112345677999999999999999975
No 303
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.78 E-value=8.7e-20 Score=186.02 Aligned_cols=165 Identities=19% Similarity=0.228 Sum_probs=100.3
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCC---CCCeeecccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDY---DMTAYVGDFG 451 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~---~~~~kl~DfG 451 (614)
+...++|||||++|+|.+++.... ...+++..+..++.++ |+||+++. ++.+||+|||
T Consensus 98 ~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 98 KRCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred CceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 455799999999999999998653 3468999998888887 99999986 4559999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
+++...... .....||+.|+| |. ...++.++|||||||+++||+||+.||.........
T Consensus 177 ~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--------- 238 (336)
T 3fhr_A 177 FAKETTQNA---------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--------- 238 (336)
T ss_dssp TCEEC-------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------
T ss_pred cceeccccc---------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh---------
Confidence 998665332 234678999977 87 667889999999999999999999999753221110
Q ss_pred CCChHHHHHHHHh-cCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 PESVMELVYSRLL-QGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
......+. ........... .....+.++...|++.+|++|||+.|+++
T Consensus 239 -----~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 239 -----PGMKRRIRLGQYGFPNPEWS-------EVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -----------------CCCTTTST-------TCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -----hhHHHhhhccccccCchhhc-------cCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000000 00000000000 11123445777999999999999999996
No 304
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=4.2e-20 Score=206.76 Aligned_cols=219 Identities=20% Similarity=0.161 Sum_probs=127.5
Q ss_pred CCCCeeeecCCcccccCCcCCCCCCCCcE-----EecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcC
Q 046036 11 FRLQNLNFGNSTVQGEIPSHLSPTSKLTY-----LSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPK 85 (614)
Q Consensus 11 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~-----L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~ 85 (614)
+.++.|+|.+|.+.. .+..+.....|.. ++++.|++. ..|.. +..++ +|+.|+|++|.+. .+|..+..
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~---~~~l~-~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDS---KYDDQ-LWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp ------------------------------------------------------CCC-CCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhh---hccCC-CCcEEECCCCCCC-CCChhhcC
Confidence 568899999999985 3444332222322 333344444 44555 67777 9999999999998 78888889
Q ss_pred CCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCC
Q 046036 86 YFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPK 165 (614)
Q Consensus 86 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 165 (614)
+++|++|+|++|.|+ .+|..|++|++|++|+ |++|.|+ .+|..|..|++|++|+|++|.|+ .+|.
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~------------Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~ 310 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLD------------LSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPW 310 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEE------------CTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCS
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEe------------CcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccCh
Confidence 999999999999999 8899999999999888 9999999 77999999999999999999998 7888
Q ss_pred CCCCCCCCCEEEcCCCCCccCCcccccCCCC-CceeccCCccCCCCccccccCcccchHHhccCc--------cccccCC
Q 046036 166 PSGLFSTLSSIDFAHNNFNGSLPLEVGSLSN-TQELDFSEHMLSDEIPITLGNRSKFEHLLLGGN--------MFQGRIP 236 (614)
Q Consensus 166 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N--------~l~~~~p 236 (614)
.++.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|++++| .+.+..+
T Consensus 311 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~ 384 (727)
T 4b8c_D 311 EFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTE 384 (727)
T ss_dssp STTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------------------------------
T ss_pred hhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCcccccc
Confidence 8999999999999999999999988866532 235889999999988865 455667766 4444445
Q ss_pred ccccCCCccceEEccCCcCcc
Q 046036 237 PFFGSFKGTIDLNLSHNNLSG 257 (614)
Q Consensus 237 ~~~~~l~~L~~L~Ls~N~l~~ 257 (614)
..+..+..+....+++|-+.+
T Consensus 385 ~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 385 HLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp -----------------CCCG
T ss_pred chhhcccccceeeeecccccc
Confidence 555667777778888888763
No 305
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.78 E-value=3.8e-19 Score=176.76 Aligned_cols=157 Identities=20% Similarity=0.287 Sum_probs=115.7
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... ..+++.....++.++ |+||+++.++.+||+|||++
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 161 (284)
T 2vgo_A 85 DRKRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 161 (284)
T ss_dssp CSSEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred cCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEeccccc
Confidence 456789999999999999999753 358888888887777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
....... .....||+.|+| |. ...++.++||||||++++||++|+.||......
T Consensus 162 ~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------------- 218 (284)
T 2vgo_A 162 VHAPSLR---------RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-------------- 218 (284)
T ss_dssp EECSSSC---------BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------------
T ss_pred ccCcccc---------cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--------------
Confidence 7654321 234679999977 87 567889999999999999999999999753211
Q ss_pred ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 531 SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 531 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+........... .+ +... ..+.++...|++.+|++||++.|+++
T Consensus 219 ---~~~~~~~~~~~~-~~---~~~~-------~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 219 ---ETHRRIVNVDLK-FP---PFLS-------DGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---HHHHHHHTTCCC-CC---TTSC-------HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHhccccC-CC---CcCC-------HHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 111111111111 01 0111 12345677999999999999999986
No 306
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.78 E-value=1.7e-19 Score=190.06 Aligned_cols=109 Identities=26% Similarity=0.262 Sum_probs=91.4
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCC--eeeccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMT--AYVGDFGL 452 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~--~kl~DfGl 452 (614)
++..++||||++ |+|.+++.... ...++|..+.+|+.++ |+|||++.++. +||+|||+
T Consensus 171 ~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 171 RNHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp TTEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred CCeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 567899999997 69999997643 3458999988888887 99999999987 99999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
++..... ....+||+.|+| |+ ...++.++|||||||+++||+||+.||...
T Consensus 249 a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 249 SCYEHQR----------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CEETTCC----------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecCCc----------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 9765432 234689999977 87 677999999999999999999999999764
No 307
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.78 E-value=1.1e-19 Score=181.08 Aligned_cols=163 Identities=21% Similarity=0.216 Sum_probs=105.5
Q ss_pred CCCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC-------------------CCceeeCCCCCeeecccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI-------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i-------------------~~NILld~~~~~kl~DfG 451 (614)
.++..++||||++ |+|.+++.... ....+++..+..++.++ |+||+++.++.+||+|||
T Consensus 77 ~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 77 REGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp CSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred ccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecC
Confidence 4567899999998 59888875311 23468898888877666 899999999999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc------cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHH
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW------VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFC 524 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~------~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~ 524 (614)
+++...... ......||+.|+| |. ...++.++|||||||+++||+||+.||......
T Consensus 156 ~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------- 219 (290)
T 3fme_A 156 ISGYLVDDV--------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------- 219 (290)
T ss_dssp ----------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH--------
T ss_pred Ccccccccc--------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch--------
Confidence 998765432 1233579999977 76 346788999999999999999999999742211
Q ss_pred HhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 525 EMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
...+...+.......+.. .....+.+++..|++.+|++|||+.|+++
T Consensus 220 --------~~~~~~~~~~~~~~~~~~---------~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 220 --------FQQLKQVVEEPSPQLPAD---------KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp --------HHHHHHHHHSCCCCCCTT---------TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --------HHHHHHHhccCCCCcccc---------cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111112222211111111 01123446777999999999999999986
No 308
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=1.3e-19 Score=177.67 Aligned_cols=167 Identities=20% Similarity=0.245 Sum_probs=92.3
Q ss_pred cccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhh
Q 046036 64 KLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESL 143 (614)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~ 143 (614)
++..+++++|.+++ ++ .+..+++|++|++++|.++ .+| .+..+++|+.|+ |++|+|++..+ +
T Consensus 20 ~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~------------L~~N~i~~~~~--l 81 (263)
T 1xeu_A 20 NAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELH------------LSHNQISDLSP--L 81 (263)
T ss_dssp HHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEE------------CCSSCCCCCGG--G
T ss_pred HHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEE------------CCCCccCCChh--h
Confidence 44555666666653 22 3555666666666666665 333 455555555555 66666664433 6
Q ss_pred hccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchH
Q 046036 144 ENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEH 223 (614)
Q Consensus 144 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 223 (614)
..+++|++|+|++|++++ +|.... ++|+.|++++|.+++. + .+..+++|+.|++++|++++. + .+..+++|+.
T Consensus 82 ~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~ 154 (263)
T 1xeu_A 82 KDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEV 154 (263)
T ss_dssp TTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCE
T ss_pred ccCCCCCEEECCCCccCC-cCcccc--CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCE
Confidence 666666666666666663 333222 6666666666666642 2 356666666666666666543 1 3444555555
Q ss_pred HhccCccccccCCccccCCCccceEEccCCcCcc
Q 046036 224 LLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSG 257 (614)
Q Consensus 224 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 257 (614)
|+|++|.+++. ..+..+++|+.|++++|++++
T Consensus 155 L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 155 LDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp EECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred EECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 55555555433 344455555555555555553
No 309
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.78 E-value=2.5e-19 Score=179.09 Aligned_cols=161 Identities=19% Similarity=0.244 Sum_probs=117.8
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 161 (294)
T 2rku_A 85 EDNDFVFVVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 161 (294)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ccCCEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccC
Confidence 3456789999999999999998643 358888888888877 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++....... ......||+.|+| |. ...++.++||||||++++||+||+.||......
T Consensus 162 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------------- 221 (294)
T 2rku_A 162 ATKVEYDGE-------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------------- 221 (294)
T ss_dssp CEECCSTTC-------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------------
T ss_pred ceecccCcc-------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------------
Confidence 987653321 1334679999977 87 567889999999999999999999999753211
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVME 589 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 589 (614)
+.......... ..+.. . . ..+.++...|++.+|++|||+.|+++.
T Consensus 222 ----~~~~~~~~~~~-~~~~~---~----~---~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 222 ----ETYLRIKKNEY-SIPKH---I----N---PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ----HHHHHHHTTCC-CCCTT---S----C---HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----HHHHHHhhccC-CCccc---c----C---HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11111111111 11110 1 1 123456779999999999999999863
No 310
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.78 E-value=4.8e-19 Score=184.33 Aligned_cols=116 Identities=24% Similarity=0.288 Sum_probs=88.0
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
....++|||||+ |+|.+++... .+++..+..++.++ |+|||++.++.+||+|||+|+
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CCEEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 346899999999 5999999753 47888777777666 999999999999999999998
Q ss_pred ccCCCCCCC--------------CCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 455 FLPTNVTNP--------------MKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 455 ~~~~~~~~~--------------~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
......... .......+..+||++|+| |. ...++.++||||+||+++||++|+.||...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 764321100 000112345689999977 87 357899999999999999999999999763
No 311
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.78 E-value=4.2e-20 Score=186.80 Aligned_cols=177 Identities=19% Similarity=0.216 Sum_probs=120.2
Q ss_pred CCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
....++||||+++|+|.+++.... ....+++..+..++.++ |+||+++.++.+||+|||++
T Consensus 102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 102 KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 456789999999999999987521 23468999988888877 99999999999999999998
Q ss_pred cccCCCCCCCC--CCCcCcccccccccccc-cc-c-C---CCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 454 RFLPTNVTNPM--KGQSNSAAVWGSIGYNM-EW-V-A---RYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 454 ~~~~~~~~~~~--~~~~~~~~~~gt~~y~a-E~-~-~---~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
+.......... ..........||+.|+| |. . . .++.++|||||||++|||++|+.||...........
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~---- 257 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA---- 257 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH----
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh----
Confidence 76542211000 00000123567999966 87 2 1 368899999999999999999999964322111111
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhH
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIK 594 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~ 594 (614)
... ...... + ..+.. ...+.++...|++.+|++|||+.|+++.|+.++
T Consensus 258 --------~~~----~~~~~~-~-~~~~~-------~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 258 --------LAV----QNQLSI-P-QSPRH-------SSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp --------HHH----HCC--C-C-CCTTS-------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred --------HHh----hccCCC-C-ccccC-------CHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 111 110000 0 00011 123446777999999999999999999998775
No 312
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.78 E-value=3.5e-19 Score=178.88 Aligned_cols=162 Identities=17% Similarity=0.190 Sum_probs=115.9
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceee---CCCCCeeecc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLL---DYDMTAYVGD 449 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILl---d~~~~~kl~D 449 (614)
...+..++||||+++|+|.+++... ..+++.....++.++ |+||++ ++++.+||+|
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~D 152 (304)
T 2jam_A 76 ESTTHYYLVMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITD 152 (304)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCS
T ss_pred ccCCEEEEEEEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEcc
Confidence 3456789999999999999998743 247888888777766 999999 7889999999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
||+++..... ......||+.|+| |. ...++.++||||+||+++||++|+.||.....
T Consensus 153 fg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------- 212 (304)
T 2jam_A 153 FGLSKMEQNG---------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE----------- 212 (304)
T ss_dssp CSTTCCCCCB---------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-----------
T ss_pred CCcceecCCC---------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----------
Confidence 9999764322 1334679999976 87 56789999999999999999999999975321
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.................... ...+.++...|++.+|++|||+.|+++
T Consensus 213 ------~~~~~~i~~~~~~~~~~~~~~~-------~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 213 ------SKLFEKIKEGYYEFESPFWDDI-------SESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ------HHHHHHHHHCCCCCCTTTTTTS-------CHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ------HHHHHHHHcCCCCCCccccccC-------CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111111111111111100111 123445677999999999999999986
No 313
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.78 E-value=6.1e-20 Score=182.93 Aligned_cols=112 Identities=20% Similarity=0.296 Sum_probs=87.7
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++ +|.+++... ...+++.....++.++ |+||+++.++.+||+|||++
T Consensus 71 ~~~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (288)
T 1ob3_A 71 TKKRLVLVFEHLDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147 (288)
T ss_dssp CSSCEEEEEECCSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred cCCeEEEEEEecCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccc
Confidence 45678999999996 999998753 2358888888887777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
+...... .......||+.|+| |. ...++.++||||+||+++||+||+.||...
T Consensus 148 ~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (288)
T 1ob3_A 148 RAFGIPV-------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204 (288)
T ss_dssp HHHCC----------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccCccc-------cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 8765332 12334678999977 86 345899999999999999999999999753
No 314
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.78 E-value=1.5e-19 Score=181.46 Aligned_cols=176 Identities=22% Similarity=0.248 Sum_probs=113.8
Q ss_pred CCCceeEEecccCCCchhhhccCC-----CCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeec
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPN-----EATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVG 448 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~-----~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~ 448 (614)
.++..++||||+++|+|.+++... .....+++..+..++.++ |+||+++.++.+||+
T Consensus 84 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~ 163 (303)
T 2vwi_A 84 VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA 163 (303)
T ss_dssp SSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEEC
T ss_pred ecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEE
Confidence 356689999999999999998631 123458899888888877 999999999999999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHH
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFC 524 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~ 524 (614)
|||+++......... .........||+.|+| |. ...++.++|||||||+++||+||+.||........ ... .
T Consensus 164 dfg~~~~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~-~ 239 (303)
T 2vwi_A 164 DFGVSAFLATGGDIT--RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LML-T 239 (303)
T ss_dssp CCHHHHHCC-----------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHH-H
T ss_pred eccchheeccCCCcc--chhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-HHH-H
Confidence 999998765432110 0011234679999977 87 25689999999999999999999999975322111 110 1
Q ss_pred HhhCCCChH-HHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 525 EMALPESVM-ELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 525 ~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
....+.... ...+..+.. .....+.++...|++.+|++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 240 LQNDPPSLETGVQDKEMLK-----------------KYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp HTSSCCCTTC-----CCCC-----------------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hccCCCccccccccchhhh-----------------hhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 001111100 000000000 01123446777999999999999999986
No 315
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.77 E-value=2.7e-19 Score=182.38 Aligned_cols=160 Identities=19% Similarity=0.237 Sum_probs=117.7
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 187 (335)
T 2owb_A 111 EDNDFVFVVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL 187 (335)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ecCCeEEEEEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccC
Confidence 3466789999999999999998743 358898888888877 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
++....... ......||+.|+| |. ...++.++|||||||++|||++|+.||......
T Consensus 188 ~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------- 247 (335)
T 2owb_A 188 ATKVEYDGE-------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------------- 247 (335)
T ss_dssp CEECCSTTC-------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------------
T ss_pred ceecccCcc-------cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-------------
Confidence 987653321 2334679999977 87 667889999999999999999999999753211
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+........... .+. .. . ..+.++...|++.+|++|||+.|+++
T Consensus 248 ----~~~~~~~~~~~~-~~~---~~----~---~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 248 ----ETYLRIKKNEYS-IPK---HI----N---PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ----HHHHHHHHTCCC-CCT---TS----C---HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ----HHHHHHhcCCCC-CCc---cC----C---HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111111111110 010 00 1 12335667999999999999999986
No 316
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=3.2e-19 Score=166.15 Aligned_cols=157 Identities=22% Similarity=0.264 Sum_probs=118.5
Q ss_pred CeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcc-cccCCCCCceeccCCccCCCCccccccCcccchHHhccC
Q 046036 150 QILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPL-EVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGG 228 (614)
Q Consensus 150 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~ 228 (614)
+.+++++|.++ .+|..+.. +|++|++++|.|++..+. .|..+++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777775 56665433 788888888888765553 377888888888888888888788888888888888888
Q ss_pred ccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCCccccCCCceEEEecCCCcccCCC
Q 046036 229 NMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPSMSVFTNTSVISIVGNGKLCGGVP 308 (614)
Q Consensus 229 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~l~~~~~~~N~~~c~~~~ 308 (614)
|+|++..+..|..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+-.+....+....+.++...|+.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 88888888888889999999999999998888889999999999999999988765332222122223455666776554
Q ss_pred C
Q 046036 309 E 309 (614)
Q Consensus 309 ~ 309 (614)
.
T Consensus 168 ~ 168 (192)
T 1w8a_A 168 K 168 (192)
T ss_dssp T
T ss_pred H
Confidence 3
No 317
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.77 E-value=5.8e-19 Score=176.65 Aligned_cols=163 Identities=23% Similarity=0.291 Sum_probs=117.8
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
..++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 3456789999999999999999753 358888888888777 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc--------cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHH
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--------VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNF 523 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--------~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~ 523 (614)
++...... ......||+.|+| |. ...++.++||||||++++||++|+.||.....
T Consensus 171 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------- 234 (298)
T 1phk_A 171 SCQLDPGE--------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-------- 234 (298)
T ss_dssp CEECCTTC--------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------
T ss_pred hhhcCCCc--------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--------
Confidence 98765432 1334679999977 76 23578899999999999999999999964221
Q ss_pred HHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 524 CEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+................... ....+.++...|++.+|++|||+.|+++
T Consensus 235 ---------~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 235 ---------MLMLRMIMSGNYQFGSPEWDD-------YSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp ---------HHHHHHHHHTCCCCCTTTGGG-------SCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ---------HHHHHHHhcCCcccCcccccc-------cCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 111111112211111111111 1223446777999999999999999875
No 318
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.77 E-value=2.9e-19 Score=181.68 Aligned_cols=181 Identities=18% Similarity=0.125 Sum_probs=115.9
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCC-Ceeecccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDM-TAYVGDFGLA 453 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~-~~kl~DfGla 453 (614)
....++||||+++|+|.+++.. +++..+..++.++ |+|||++.++ .+||+|||++
T Consensus 105 ~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a 178 (330)
T 3nsz_A 105 SRTPALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178 (330)
T ss_dssp TCCEEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CCceEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence 4567999999999999999852 6777777777666 9999999776 8999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+....... .....||+.|+| |. ...++.++||||+||+++||++|+.||.........+.......-+
T Consensus 179 ~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~ 250 (330)
T 3nsz_A 179 EFYHPGQE--------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250 (330)
T ss_dssp EECCTTCC--------CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCH
T ss_pred eEcCCCCc--------cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCC
Confidence 87654322 334678999977 76 3578999999999999999999999996432222222222211111
Q ss_pred CChHHHHH-----------HHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVY-----------SRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~-----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
....+.++ ..+...... ...+..........-..+.++...|++.+|++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 251 EDLYDYIDKYNIELDPRFNDILGRHSRK-RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHHHHTTCCCCTHHHHHHCCCCCC-CGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred chhhhHHHHhccccccchhhhhhhcccc-chhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11111111 111100000 00000000000001234456778999999999999999986
No 319
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.77 E-value=3.5e-20 Score=191.78 Aligned_cols=172 Identities=12% Similarity=0.044 Sum_probs=112.8
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHH------HHHHhhC------------------CCceeeCCCCCeeecc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEG------LKIAVDI------------------PSNVLLDYDMTAYVGD 449 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~------~~ia~~i------------------~~NILld~~~~~kl~D 449 (614)
...++|||||+ |+|.+++.... ..+.+..+ ..++.++ |+|||++.++.+||+|
T Consensus 161 ~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~D 237 (371)
T 3q60_A 161 ANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGD 237 (371)
T ss_dssp EEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECC
T ss_pred eeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEe
Confidence 44799999999 89999997532 12344444 4444444 9999999999999999
Q ss_pred cccccccCCCCCCCCCCCcCcccccccccccc-cc--c--CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHH
Q 046036 450 FGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V--ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFC 524 (614)
Q Consensus 450 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~--~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~ 524 (614)
||+++..... .....||+.|+| |. . ..++.++|||||||++|||+||+.||.......... |.
T Consensus 238 FG~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~--~~ 305 (371)
T 3q60_A 238 VSALWKVGTR----------GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS--WK 305 (371)
T ss_dssp GGGEEETTCE----------EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC--CC
T ss_pred cceeeecCCC----------ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc--hh
Confidence 9999866432 224567799977 87 3 578999999999999999999999998643221100 00
Q ss_pred HhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH--HHHHhHHHh
Q 046036 525 EMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM--EMNVIKEVL 597 (614)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~--~L~~i~~~~ 597 (614)
....... ..........+.. ...+.++...|++.+|++|||+.|+++ .++++....
T Consensus 306 ~~~~~~~----------~~~~~~~~~~~~~-------~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~ 363 (371)
T 3q60_A 306 RPSLRVP----------GTDSLAFGSCTPL-------PDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEI 363 (371)
T ss_dssp BCCTTSC----------CCCSCCCTTSSCC-------CHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHHH
T ss_pred hhhhhhc----------cccccchhhccCC-------CHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHHH
Confidence 0000000 0000000000011 123345677999999999999999985 555555443
No 320
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.77 E-value=4.3e-19 Score=188.58 Aligned_cols=181 Identities=18% Similarity=0.111 Sum_probs=111.9
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
....++|||||++ +|.+.+.. .+++..+..++.++ |+|||++.++.+||+|||+++
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CCeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 3567999999987 56666653 37888877777776 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC-C-
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL-P- 529 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~-~- 529 (614)
...... ..+..+||++|+| |. ...++.++||||+||+++||++|+.||.+..... .+....+..- |
T Consensus 213 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~ 283 (464)
T 3ttj_A 213 TAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPC 283 (464)
T ss_dssp ----CC--------CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCC
T ss_pred ecCCCc--------ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCC
Confidence 765432 2445789999977 87 6688999999999999999999999997532211 1111111111 1
Q ss_pred ----CChHHHHHHHHhcCcCCCCCCch---------hhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ----ESVMELVYSRLLQGVDKDAEDEP---------CMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ----~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
......+...+...........+ ...+.....-..+.++...|++.||++|||++|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 01111121222111000000000 000111122345667888999999999999999986
No 321
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.77 E-value=7.8e-20 Score=186.78 Aligned_cols=163 Identities=21% Similarity=0.210 Sum_probs=115.2
Q ss_pred CCCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC-------------------CCceeeCCCCCeeecccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI-------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i-------------------~~NILld~~~~~kl~DfG 451 (614)
.++..++||||+++ +|.+++.... ....++|..+..++.++ |+||+++.++.+||+|||
T Consensus 121 ~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 199 (340)
T 3an0_A 121 REGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 199 (340)
T ss_dssp CSSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCS
T ss_pred eCCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCC
Confidence 45678999999985 9999886311 23468888888777666 999999999999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc------cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHH
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW------VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFC 524 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~------~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~ 524 (614)
+++..... .......||+.|+| |. ...++.++|||||||++|||+||+.||......
T Consensus 200 ~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-------- 263 (340)
T 3an0_A 200 ISGYLVDS--------VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------- 263 (340)
T ss_dssp HHHHHSCH--------HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH--------
T ss_pred Cceecccc--------cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch--------
Confidence 99876532 11233579999977 86 236889999999999999999999999752111
Q ss_pred HhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 525 EMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+...+.......+.. .....+.+++..|++.+|++|||+.|+++
T Consensus 264 --------~~~~~~~~~~~~~~~~~~---------~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 264 --------FQQLKQVVEEPSPQLPAD---------KFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp --------HHHHHHHHHSCCCCCCGG---------GSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --------HHHHHHHhcCCCCCCCcc---------cCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111222111111100 11123456777999999999999999986
No 322
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.77 E-value=1.1e-19 Score=189.39 Aligned_cols=186 Identities=17% Similarity=0.138 Sum_probs=115.5
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeC-CCCCeeecccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLD-YDMTAYVGDFGLA 453 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld-~~~~~kl~DfGla 453 (614)
..+.++|||||+++.+....+.......+++.....++.++ |+|||++ .++.+||+|||++
T Consensus 110 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 110 EVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp CEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred ceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 34478999999985544433211123458888877777766 9999999 7899999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+....... .....||+.|+| |. ...++.++||||+||+++||++|+.||...... ..+....+..-.
T Consensus 190 ~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~ 260 (394)
T 4e7w_A 190 KILIAGEP--------NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGT 260 (394)
T ss_dssp EECCTTCC--------CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCC
T ss_pred ccccCCCC--------CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 87754432 234678999977 86 346899999999999999999999999764321 112222222111
Q ss_pred CChHHH--HHHHHhcCcCCCCCCchhhHHHH-HHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMEL--VYSRLLQGVDKDAEDEPCMKAKI-RECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.....+ ..+......-+... ...+...+ ......+.++...|++.+|++|||+.|+++
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 261 PSREQIKTMNPNYMEHKFPQIR-PHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CCHHHHHHHCGGGSSSCCCCCC-CCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCHHHHHhhChhhhhhcccccc-CCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 111111 11111110000000 00010000 011224556778999999999999999986
No 323
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.77 E-value=8.7e-20 Score=186.88 Aligned_cols=185 Identities=18% Similarity=0.130 Sum_probs=116.9
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGl 452 (614)
...+..++||||+++ +|.+++.... ..+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 82 ~~~~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (346)
T 1ua2_A 82 GHKSNISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGL 158 (346)
T ss_dssp CCTTCCEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred eeCCceEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEeccc
Confidence 446678999999996 8999987542 346777777766666 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh-h
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM-A 527 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~-~ 527 (614)
++...... .......||+.|+| |. ...++.++|||||||+++||++|+.||....... .+...... .
T Consensus 159 a~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~ 230 (346)
T 1ua2_A 159 AKSFGSPN-------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLG 230 (346)
T ss_dssp GSTTTSCC-------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHC
T ss_pred ceeccCCc-------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcC
Confidence 98765432 12345679999977 87 2357899999999999999999999987532211 11111111 1
Q ss_pred CCC--ChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 528 LPE--SVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 528 ~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+. ...+.. .+........................+.++...|++.+|++|||+.|+++
T Consensus 231 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 231 TPTEEQWPDMC--SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CCCTTTSSSTT--SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCChhhhhhhc--cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 110 000000 00000000000000000001111234556778999999999999999986
No 324
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.77 E-value=7.3e-19 Score=179.24 Aligned_cols=110 Identities=21% Similarity=0.254 Sum_probs=91.0
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCC------------
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDY------------ 441 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~------------ 441 (614)
.++..++||||+ +|+|.+++.... ...+++..+..++.++ |+||+++.
T Consensus 88 ~~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 88 HHGHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred cCCcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccc
Confidence 356789999999 889999997643 3458888888888777 99999998
Q ss_pred -------CCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCC
Q 046036 442 -------DMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTD 511 (614)
Q Consensus 442 -------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~ 511 (614)
++.+||+|||+++..... .....||+.|+| |. ...++.++|||||||+++||+||+.||.
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 235 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEH----------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFP 235 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSC----------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccCCCceEeeCcccccCccc----------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 668999999999865432 223679999977 87 6678999999999999999999999997
Q ss_pred cc
Q 046036 512 EM 513 (614)
Q Consensus 512 ~~ 513 (614)
..
T Consensus 236 ~~ 237 (339)
T 1z57_A 236 TH 237 (339)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 325
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.77 E-value=6.1e-19 Score=174.44 Aligned_cols=158 Identities=23% Similarity=0.334 Sum_probs=106.7
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.++.+|++|||++
T Consensus 82 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 158 (276)
T 2h6d_A 82 TPTDFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158 (276)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGG
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccc
Confidence 456789999999999999999743 247888888887777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCC-CCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VAR-YQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~-~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+...... ......||+.|+| |. ... .+.++||||||++++||++|+.||.....
T Consensus 159 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------------- 216 (276)
T 2h6d_A 159 NMMSDGE--------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-------------- 216 (276)
T ss_dssp GCCCC---------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--------------
T ss_pred cccCCCc--------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------------
Confidence 8765432 1234578999966 87 223 36899999999999999999999975211
Q ss_pred CChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.... +.......+.. . -..+.++...|++.+|++|||+.|+++
T Consensus 217 ---~~~~~~-~~~~~~~~~~~---~-------~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 217 ---PTLFKK-IRGGVFYIPEY---L-------NRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ---HHHHHH-HHHCCCCCCTT---S-------CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---HHHHHH-hhcCcccCchh---c-------CHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 111111 11111111110 0 112345677999999999999999986
No 326
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.77 E-value=5.8e-19 Score=178.13 Aligned_cols=162 Identities=19% Similarity=0.251 Sum_probs=116.6
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
.+..++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 173 (314)
T 3com_A 96 NTDLWIVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAG 173 (314)
T ss_dssp TTEEEEEEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCEEEEEeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccch
Confidence 45679999999999999998632 2358888888888777 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
...... .......||+.|+| |. ...++.++|||||||+++||++|+.||......
T Consensus 174 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------------- 231 (314)
T 3com_A 174 QLTDTM-------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM--------------- 231 (314)
T ss_dssp ECBTTB-------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH---------------
T ss_pred hhhhhc-------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH---------------
Confidence 765432 12334679999977 87 567899999999999999999999999753211
Q ss_pred hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 532 VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+.... +.............+ ...+.++...|++.+|++|||+.|+++
T Consensus 232 --~~~~~-~~~~~~~~~~~~~~~-------~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 232 --RAIFM-IPTNPPPTFRKPELW-------SDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --HHHHH-HHHSCCCCCSSGGGS-------CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --HHHHH-HhcCCCcccCCcccC-------CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00000 011100000011111 123445677999999999999999986
No 327
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.77 E-value=3.8e-19 Score=180.46 Aligned_cols=162 Identities=20% Similarity=0.213 Sum_probs=108.4
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
.+..++||||+++|+|.+++.... ...+++.....++.++ |+||+++.++.+||+|||+++
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 177 (326)
T 2x7f_A 99 DDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177 (326)
T ss_dssp CCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred cceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence 467899999999999999997542 3458888777777766 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc-------cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-------VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-------~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
....... ......||+.|+| |. ...++.++|||||||++|||+||+.||......
T Consensus 178 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------- 240 (326)
T 2x7f_A 178 QLDRTVG-------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM---------- 240 (326)
T ss_dssp --------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----------
T ss_pred ecCcCcc-------ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH----------
Confidence 7653321 1334679999977 76 246789999999999999999999999653211
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+........... .. ...... ..+.++...|++.+|++||++.|+++
T Consensus 241 -------~~~~~~~~~~~~-~~-~~~~~~-------~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 241 -------RALFLIPRNPAP-RL-KSKKWS-------KKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -------HHHHHHHHSCCC-CC-SCSCSC-------HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -------HHHHHhhcCccc-cC-CccccC-------HHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000011111100 00 000111 12345667999999999999999986
No 328
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.77 E-value=1.3e-19 Score=180.91 Aligned_cols=111 Identities=23% Similarity=0.298 Sum_probs=87.8
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++ ++.+.+... ...+++..+..++.++ |+||+++.++.+||+|||++
T Consensus 72 ~~~~~~lv~e~~~~-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~ 148 (292)
T 3o0g_A 72 SDKKLTLVFEFCDQ-DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLA 148 (292)
T ss_dssp ETTEEEEEEECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eCCEEEEEEecCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 35678999999996 565555432 2358888888888777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cC-CCCccCceeehhHHHHHHHhCCCCCCc
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VA-RYQHKGKGYSCGILLLEIMTGKRPTDE 512 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~-~~~~k~DVySfGvvllElltG~~p~~~ 512 (614)
+....... ......||+.|+| |. .. .++.++|||||||+++||+||+.|+..
T Consensus 149 ~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~ 204 (292)
T 3o0g_A 149 RAFGIPVR-------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_dssp EECCSCCS-------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred eecCCccc-------cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC
Confidence 87654321 2345678999977 86 33 479999999999999999999988643
No 329
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.77 E-value=4e-19 Score=180.04 Aligned_cols=161 Identities=22% Similarity=0.242 Sum_probs=114.3
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCC---eeeccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMT---AYVGDFGL 452 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~---~kl~DfGl 452 (614)
+..++||||+++|+|.+++... ..+++.....++.++ |+||+++.++. +||+|||+
T Consensus 87 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 87 EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp SSEEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred CceEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 3479999999999999999753 358888888777776 99999987654 99999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc-----cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-----VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-----~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
++..... .......||+.|+| |. ...++.++|||||||+++||++|+.||........ +......
T Consensus 164 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~ 234 (322)
T 2ycf_A 164 SKILGET--------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITS 234 (322)
T ss_dssp CEECCCC--------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHHH
T ss_pred ceecccc--------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHHh
Confidence 9876532 12334679999977 86 35678999999999999999999999975322211 1111111
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.......+. ..+....+.++...|++.+|++||++.|+++
T Consensus 235 ~~~~~~~~~----------------------~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 235 GKYNFIPEV----------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp TCCCCCHHH----------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CccccCchh----------------------hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 100000000 0111223456778999999999999999985
No 330
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.76 E-value=8.4e-19 Score=181.29 Aligned_cols=106 Identities=23% Similarity=0.222 Sum_probs=78.6
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
...++|||||++ +|.+++.. .+++.....++.++ |+|||++.++.+||+|||+++.
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred cceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 467999999985 88888853 37888877777776 9999999999999999999986
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
..... ......||+.|+| |. ...++.++||||+||+++||+||+.||...
T Consensus 177 ~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 177 AGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp ---------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccc--------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 64321 2334689999977 87 667899999999999999999999999753
No 331
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.76 E-value=3.6e-19 Score=183.33 Aligned_cols=183 Identities=20% Similarity=0.142 Sum_probs=111.9
Q ss_pred ceeEEecccCCCchhhhccC-CCCCcccCHHHHHHHHhhC--------------------CCceeeCC-CCCeeeccccc
Q 046036 395 FKALAFEFMPNGSLESWLHP-NEATRRLDLAEGLKIAVDI--------------------PSNVLLDY-DMTAYVGDFGL 452 (614)
Q Consensus 395 ~~~LV~Ey~~~GsL~~~L~~-~~~~~~l~~~~~~~ia~~i--------------------~~NILld~-~~~~kl~DfGl 452 (614)
..++||||+++ +|.+.+.. ......+++.....++.++ |+|||++. ++.+||+|||+
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~ 178 (360)
T 3e3p_A 100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGS 178 (360)
T ss_dssp EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence 47899999997 44443321 1123356666666555544 99999997 89999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
++....... .....||++|+| |. ...++.++|||||||++|||+||+.||...... ..+....+...
T Consensus 179 a~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~ 249 (360)
T 3e3p_A 179 AKKLSPSEP--------NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLG 249 (360)
T ss_dssp CBCCCTTSC--------CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC
T ss_pred ceecCCCCC--------cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcC
Confidence 987764422 234678999977 86 345899999999999999999999999763221 11222222111
Q ss_pred CCChHHHHHHHHhcCcCCC--CCCchhhHHHH----HHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 PESVMELVYSRLLQGVDKD--AEDEPCMKAKI----RECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~----~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.. ..+.+...-....... ......+.... .+....+.++...|++.+|++|||+.|+++
T Consensus 250 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 250 CP-SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CC-CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC-CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11 1111111100000000 00000011000 012345667888999999999999999985
No 332
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.76 E-value=1.5e-19 Score=183.41 Aligned_cols=112 Identities=20% Similarity=0.247 Sum_probs=92.4
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.....++||||++ |+|.+++.... ...+++..+..++.++ |+||+++.++.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~ 167 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred CCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccc
Confidence 3566899999999 69999997542 3358898888888777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
+..... .......||+.|+| |. ...++.++|||||||+++||+||+.||...
T Consensus 168 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 168 RIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp CCCCGG--------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCC--------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 866432 12334678999977 87 667899999999999999999999999753
No 333
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.76 E-value=2.3e-19 Score=186.45 Aligned_cols=192 Identities=17% Similarity=0.145 Sum_probs=121.2
Q ss_pred CCCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC------------------CCceeeC-CCCCeeecccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI------------------PSNVLLD-YDMTAYVGDFG 451 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i------------------~~NILld-~~~~~kl~DfG 451 (614)
.+...++|||||+ |+|.+.+.... ....+++..+..++.++ |+|||++ .++.+||+|||
T Consensus 109 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg 187 (383)
T 3eb0_A 109 QNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFG 187 (383)
T ss_dssp -CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCT
T ss_pred CceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECC
Confidence 3456789999999 58888776311 23468888888887777 9999998 68899999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
+++.+..... .....||+.|+| |. ...++.++||||+||+++||++|+.||...... ..+...+...
T Consensus 188 ~a~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~ 258 (383)
T 3eb0_A 188 SAKKLIPSEP--------SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI-DQLVRIIQIM 258 (383)
T ss_dssp TCEECCTTSC--------CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH
T ss_pred CCcccCCCCC--------CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHh
Confidence 9987654422 234678999977 86 345899999999999999999999999764221 1122222221
Q ss_pred CCCChHHHHHHHHhcCcC---CCCCCchhhHHHH-HHHHHHHHHHhhccCCCCccCCCCHHHHHH--HHHHhHH
Q 046036 528 LPESVMELVYSRLLQGVD---KDAEDEPCMKAKI-RECLTSLGRIGIASLTETPNERMGVREMVM--EMNVIKE 595 (614)
Q Consensus 528 ~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~-~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~--~L~~i~~ 595 (614)
-......+. . +..... ........+...+ ......+.++...|++.+|++|||+.|+++ .++.++.
T Consensus 259 g~p~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 259 GTPTKEQMI-R-MNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp CCCCHHHHH-H-HCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred CCCCHHHHH-H-hCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence 111111111 1 100000 0000000011000 001223556778999999999999999995 4555544
No 334
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.76 E-value=7.6e-19 Score=180.39 Aligned_cols=109 Identities=21% Similarity=0.298 Sum_probs=89.3
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceee---------------
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLL--------------- 439 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILl--------------- 439 (614)
.+..++||||+ +|++.+++.... ...+++..+..++.++ |+|||+
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred CCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccc
Confidence 56789999999 567777776542 3468999888888887 999999
Q ss_pred ----CCCCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCc
Q 046036 440 ----DYDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDE 512 (614)
Q Consensus 440 ----d~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~ 512 (614)
+.++.+||+|||+++..... .....||+.|+| |. ...++.++|||||||+++||+||+.||..
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccCCCcEEEeecCcccccccc----------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 66789999999999865432 234679999977 87 66789999999999999999999999975
Q ss_pred c
Q 046036 513 M 513 (614)
Q Consensus 513 ~ 513 (614)
.
T Consensus 242 ~ 242 (355)
T 2eu9_A 242 H 242 (355)
T ss_dssp S
T ss_pred C
Confidence 3
No 335
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.76 E-value=2.2e-19 Score=182.47 Aligned_cols=112 Identities=20% Similarity=0.231 Sum_probs=83.8
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceee-----CCCCCeee
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLL-----DYDMTAYV 447 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILl-----d~~~~~kl 447 (614)
..++..++||||++ |+|.+++.... .+++..+..|+.++ |+|||+ ++++.+||
T Consensus 103 ~~~~~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl 178 (329)
T 3gbz_A 103 HHNHRLHLIFEYAE-NDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKI 178 (329)
T ss_dssp EETTEEEEEEECCS-EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEE
T ss_pred ecCCEEEEEEecCC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEE
Confidence 34567899999999 49999997542 48888888887777 999999 45566999
Q ss_pred cccccccccCCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 448 GDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 448 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
+|||+++....... ......||+.|+| |. . ..++.++|||||||+++||++|+.||...
T Consensus 179 ~Dfg~a~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 179 GDFGLARAFGIPIR-------QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp CCTTHHHHHC------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcCCCccccCCccc-------ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 99999987654321 2344678999977 87 2 45899999999999999999999999753
No 336
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.76 E-value=1.1e-18 Score=182.06 Aligned_cols=111 Identities=20% Similarity=0.281 Sum_probs=88.4
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC-------------------CCceeeCCCC---------
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI-------------------PSNVLLDYDM--------- 443 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i-------------------~~NILld~~~--------- 443 (614)
.....++||||+ +|+|.+++.... ...+++..+..|+.++ |+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhh
Confidence 345789999999 556666665432 3458888888887766 9999999775
Q ss_pred ----------------------------------------CeeecccccccccCCCCCCCCCCCcCcccccccccccc-c
Q 046036 444 ----------------------------------------TAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-E 482 (614)
Q Consensus 444 ----------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E 482 (614)
.+||+|||+++..... .....||+.|+| |
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----------~~~~~gt~~y~aPE 263 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----------FTEDIQTRQYRSLE 263 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----------SCSCCSCGGGCCHH
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----------CccCCCCCcccCCh
Confidence 8999999999876543 233579999977 8
Q ss_pred c--cCCCCccCceeehhHHHHHHHhCCCCCCccc
Q 046036 483 W--VARYQHKGKGYSCGILLLEIMTGKRPTDEMF 514 (614)
Q Consensus 483 ~--~~~~~~k~DVySfGvvllElltG~~p~~~~~ 514 (614)
. ...++.++|||||||++|||+||+.||....
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 7 6678999999999999999999999997643
No 337
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.76 E-value=1.5e-18 Score=172.78 Aligned_cols=162 Identities=18% Similarity=0.209 Sum_probs=116.2
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCC---CCeeeccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYD---MTAYVGDF 450 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~---~~~kl~Df 450 (614)
..+..++||||+++|+|.+++... ..+++..+..++.++ |+||+++.+ +.+||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Df 168 (287)
T 2wei_A 92 DSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDF 168 (287)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECST
T ss_pred CCCeEEEEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEecc
Confidence 456789999999999999998743 358888888888877 999999764 47999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
|+++...... ......||+.|+| |. .+.++.++||||||++++||++|+.||.....
T Consensus 169 g~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------------- 227 (287)
T 2wei_A 169 GLSTCFQQNT--------KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE------------- 227 (287)
T ss_dssp TGGGTBCCCS--------SCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-------------
T ss_pred CcceeecCCC--------ccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCH-------------
Confidence 9998765432 1234578999977 87 66789999999999999999999999975321
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.................... ...+.++...|++.+|++|||+.|+++
T Consensus 228 ----~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 228 ----YDILKRVETGKYAFDLPQWRTI-------SDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp ----HHHHHHHHHCCCCCCSGGGTTS-------CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----HHHHHHHHcCCCCCCchhhhhc-------CHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 1111111111111111100011 123446777999999999999999986
No 338
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.76 E-value=9.1e-19 Score=180.60 Aligned_cols=181 Identities=19% Similarity=0.138 Sum_probs=118.7
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
...++||||++ |+|.+++... .+++..+..++.++ |+|||++.++.+||+|||+++.
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred ceEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 45799999999 5999999643 48888888888777 9999999999999999999987
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCCC
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
....... .......+||++|+| |. ...++.++||||+||+++||+||+.||....... .+...........
T Consensus 178 ~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~ 252 (364)
T 3qyz_A 178 ADPDHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPS 252 (364)
T ss_dssp CCGGGCB----CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCC
T ss_pred cCCCCCc----cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCC
Confidence 6543221 111344689999977 86 4458999999999999999999999997643221 1111111111111
Q ss_pred hHHH--------HHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 532 VMEL--------VYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 532 ~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+. ............ ...+.......-..+.++...|++.+|++|||+.|+++
T Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 253 -QEDLNCIINLKARNYLLSLPHKN---KVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp -HHHHHTCCCHHHHHHHHTSCCCC---CCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HHHHHHhhhhhHHHHHHhcCCcc---CCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 010 011111110000 00111111111234557778999999999999999985
No 339
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.76 E-value=3.1e-19 Score=178.73 Aligned_cols=113 Identities=20% Similarity=0.259 Sum_probs=90.6
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||++ |+|.+++.... ...+++..+..++.++ |+||+++.++.+||+|||++
T Consensus 73 ~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~ 150 (299)
T 2r3i_A 73 TENKLYLVFEFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150 (299)
T ss_dssp ETTEEEEEEECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHH
T ss_pred cCCceEEEEEccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhh
Confidence 3467899999998 69999997542 2357888888777776 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
+...... .......||+.|+| |. . ..++.++|||||||+++||+||+.||...
T Consensus 151 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 151 RAFGVPV-------RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp HHHCCCS-------BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred hhccCCc-------cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 8765432 12334578999977 87 3 34789999999999999999999999753
No 340
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.75 E-value=1.4e-18 Score=179.29 Aligned_cols=176 Identities=16% Similarity=0.147 Sum_probs=115.2
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
...++||||| +++|.+++... .+++.....++.++ |+|||++.++.+||+|||+++.
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred ceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 3469999999 78999999742 47888877777776 9999999999999999999987
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC-CC
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL-PE 530 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~-~~ 530 (614)
.... .+...||++|+| |. . ..++.++||||+||+++||++|+.||....... .+........ +.
T Consensus 178 ~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~ 246 (367)
T 1cm8_A 178 ADSE----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPP 246 (367)
T ss_dssp CCSS----------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCC
T ss_pred cccc----------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCC
Confidence 5432 234678999976 87 3 678999999999999999999999997532211 1111111111 10
Q ss_pred -Ch-----HHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 531 -SV-----MELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 531 -~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.. .+.....+... ...+... +.......-..+.++...|++.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 247 AEFVQRLQSDEAKNYMKGL-PELEKKD--FASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHTCSCHHHHHHHHHS-CCCCCCC--GGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHhC-CCCCCCC--HHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 00 01111111111 0000000 00000111223446777999999999999999986
No 341
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.75 E-value=1e-18 Score=173.76 Aligned_cols=156 Identities=13% Similarity=0.135 Sum_probs=110.3
Q ss_pred CCCceeEEecccCCCchhhhccCCC-CCcccCHHHHHHHHhhC------------------CCceeeCC-----------
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNE-ATRRLDLAEGLKIAVDI------------------PSNVLLDY----------- 441 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~~i------------------~~NILld~----------- 441 (614)
.++..++||||+++|+|.+++.... ....+++..+..++.++ |+||+++.
T Consensus 82 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~ 161 (289)
T 1x8b_A 82 EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEG 161 (289)
T ss_dssp ETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------
T ss_pred cCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccc
Confidence 3567899999999999999997532 12458899888888887 99999984
Q ss_pred --------CCCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCC
Q 046036 442 --------DMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRP 509 (614)
Q Consensus 442 --------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p 509 (614)
...+|++|||.++...... ...||+.|+| |. ...++.++|||||||+++||++|+.|
T Consensus 162 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~ 230 (289)
T 1x8b_A 162 DEDDWASNKVMFKIGDLGHVTRISSPQ-----------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL 230 (289)
T ss_dssp --------CCCEEECCCTTCEETTCSC-----------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccccccCCceEEEEcccccccccCCcc-----------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCC
Confidence 4479999999998765432 2458999977 77 23566899999999999999999887
Q ss_pred CCcccccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 510 TDEMFADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 510 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+... .... ..........+.. . ...+.++...|++.+|++|||+.|+++
T Consensus 231 ~~~~----~~~~----------------~~~~~~~~~~~~~---~-------~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 231 PRNG----DQWH----------------EIRQGRLPRIPQV---L-------SQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp CSSS----HHHH----------------HHHTTCCCCCSSC---C-------CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred Ccch----hHHH----------------HHHcCCCCCCCcc---c-------CHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 6431 0010 1111111111110 1 112345667999999999999999875
No 342
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.75 E-value=1.5e-18 Score=175.33 Aligned_cols=184 Identities=16% Similarity=0.187 Sum_probs=115.9
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeC-CCCCeeecccc
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLD-YDMTAYVGDFG 451 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld-~~~~~kl~DfG 451 (614)
...+..++||||++ |+|.+++... .+++..+..++.++ |+||+++ +++.+||+|||
T Consensus 92 ~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 92 TELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp CSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred cccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCc
Confidence 34567899999998 6999999642 47888887777776 9999997 56799999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA 527 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~ 527 (614)
+++........ ........||+.|+| |. ...++.++|||||||+++||+||+.||...... .........
T Consensus 167 ~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~ 240 (320)
T 2i6l_A 167 LARIMDPHYSH----KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--EQMQLILES 240 (320)
T ss_dssp TCBCC------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHH
T ss_pred cccccCCCccc----ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHh
Confidence 99876533211 112334678999977 76 367899999999999999999999999754221 111111111
Q ss_pred CCCChHHHHHHHH-------hcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 528 LPESVMELVYSRL-------LQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 528 ~~~~~~~~~~~~l-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+....+...... ..... .+... ...........+.++...|++.+|++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMT-EPHKP--LTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTT-SCCCC--HHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCCchhhhhhhhhcCccccccccc-CCCCC--hhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 1111111111100 00000 00000 00000112234556788999999999999999985
No 343
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.75 E-value=2.3e-18 Score=172.87 Aligned_cols=163 Identities=19% Similarity=0.228 Sum_probs=112.5
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++| |.+++.... ...+++..+..++.++ |+||+++.++.+|++|||++
T Consensus 79 ~~~~~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~ 156 (305)
T 2wtk_C 79 EKQKMYMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVA 156 (305)
T ss_dssp ---CEEEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCCeEEEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccc
Confidence 345689999999987 777765432 3468898888888777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc-c---CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-V---ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL 528 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~---~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~ 528 (614)
+........ .......||+.|+| |. . ...+.++|||||||+++||++|+.||.....
T Consensus 157 ~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------------- 218 (305)
T 2wtk_C 157 EALHPFAAD-----DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI------------- 218 (305)
T ss_dssp EECCTTCSS-----CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-------------
T ss_pred cccCccccc-----cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-------------
Confidence 876543211 12234679999977 87 2 2347899999999999999999999975211
Q ss_pred CCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHH
Q 046036 529 PESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVME 589 (614)
Q Consensus 529 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~ 589 (614)
.+........... .+.. ....+.++...|++.+|++|||++|+++.
T Consensus 219 ----~~~~~~i~~~~~~-~~~~----------~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 219 ----YKLFENIGKGSYA-IPGD----------CGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----HHHHHHHHHCCCC-CCSS----------SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----HHHHHHHhcCCCC-CCCc----------cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111111111 1111 11123456779999999999999999863
No 344
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=2.1e-19 Score=182.63 Aligned_cols=102 Identities=9% Similarity=-0.012 Sum_probs=66.8
Q ss_pred CCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccch-HHhccCccccccCCccccCCCccceE
Q 046036 170 FSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFE-HLLLGGNMFQGRIPPFFGSFKGTIDL 248 (614)
Q Consensus 170 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L 248 (614)
+++|+.|+|++|+++...+..|.++.+|+.|+|++| ++.+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 456666666666666555556666666666666666 5555566666666666 666666 5554555666667777777
Q ss_pred EccCCcCcccCCcccCCCCCCCEEE
Q 046036 249 NLSHNNLSGTIPKELETLPFLENLN 273 (614)
Q Consensus 249 ~Ls~N~l~~~~p~~~~~l~~L~~L~ 273 (614)
++++|+++...+..|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 7766766666666666676666665
No 345
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.75 E-value=3.3e-19 Score=178.84 Aligned_cols=163 Identities=16% Similarity=0.193 Sum_probs=111.4
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||++
T Consensus 87 ~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 87 HDGKLWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp CC-CEEEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred eCCeEEEEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 356789999999999999998642 2358888888888777 99999999999999999998
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc-------cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHH
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-------VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCE 525 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-------~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~ 525 (614)
....... .......||+.|+| |. ...++.++|||||||+++||+||+.||......
T Consensus 165 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------- 228 (302)
T 2j7t_A 165 AKNLKTL-------QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--------- 228 (302)
T ss_dssp HHHHHHH-------HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH---------
T ss_pred ccccccc-------cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH---------
Confidence 6432211 11223578999977 75 346788999999999999999999999753211
Q ss_pred hhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 526 MALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 526 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+.......... +.......+ ...+.++...|++.+|++|||+.|+++
T Consensus 229 --------~~~~~~~~~~~-~~~~~~~~~-------~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 229 --------RVLLKIAKSDP-PTLLTPSKW-------SVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --------HHHHHHHHSCC-CCCSSGGGS-------CHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --------HHHHHHhccCC-cccCCcccc-------CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11111111111 000011111 123445677999999999999999975
No 346
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.74 E-value=4.7e-19 Score=178.74 Aligned_cols=162 Identities=20% Similarity=0.285 Sum_probs=107.6
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||| +.+|+|.+++... ..+++..+..++.++ |+||++++ +.+||+|||++
T Consensus 99 ~~~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~ 173 (313)
T 3cek_A 99 TDQYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIA 173 (313)
T ss_dssp CSSEEEEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSS
T ss_pred cCCEEEEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeecccc
Confidence 4567899999 6778999999854 358888888887777 99999975 89999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc-c------------CCCCccCceeehhHHHHHHHhCCCCCCcccccCch
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-V------------ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLS 519 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~------------~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~ 519 (614)
+........ .......||+.|+| |. . ..++.++|||||||+++||+||+.||.......
T Consensus 174 ~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-- 246 (313)
T 3cek_A 174 NQMQPDTTS-----VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-- 246 (313)
T ss_dssp CC-------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH--
T ss_pred ccccCcccc-----ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH--
Confidence 876543221 12234679999977 87 2 368889999999999999999999997532211
Q ss_pred HHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 520 LHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 520 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
..+...+........... ....+.++...|++.+|++||++.|+++
T Consensus 247 --------------~~~~~~~~~~~~~~~~~~---------~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 247 --------------SKLHAIIDPNHEIEFPDI---------PEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp --------------HHHHHHHCTTSCCCCCCC---------SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --------------HHHHHHHhcccccCCccc---------chHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111111111000000 0113445677999999999999999986
No 347
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.74 E-value=1.4e-18 Score=179.01 Aligned_cols=182 Identities=16% Similarity=0.112 Sum_probs=112.5
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
....++||||++ |+|.+++... ...+++..+..++.++ |+||+++.++.+||+|||+++
T Consensus 106 ~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 182 (362)
T 3pg1_A 106 MHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182 (362)
T ss_dssp CCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC--
T ss_pred cceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccc
Confidence 346799999999 6999988753 3468898888888777 999999999999999999998
Q ss_pred ccCCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCC
Q 046036 455 FLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPE 530 (614)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~ 530 (614)
...... ......||+.|+| |. . ..++.++||||+||+++||+||+.||...... ..+..........
T Consensus 183 ~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~ 253 (362)
T 3pg1_A 183 EDTADA--------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQLNKIVEVVGTP 253 (362)
T ss_dssp ---------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCC
T ss_pred cccccc--------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCC
Confidence 554332 2344679999977 86 2 67899999999999999999999999763221 1111222211111
Q ss_pred ChHH-------HHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 531 SVME-------LVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 531 ~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
...+ .....+.......+... +.......-..+.++...|++.+|++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 254 KIEDVVMFSSPSARDYLRNSLSNVPARA--WTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp CHHHHHHTSCHHHHHHTTTCCCCCCCCC--HHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ChHHhhhccchhhhHHHHhhcccCChhh--HHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 1111 11111111111111111 11111112234557788999999999999999985
No 348
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.74 E-value=2.4e-18 Score=176.32 Aligned_cols=176 Identities=19% Similarity=0.197 Sum_probs=115.5
Q ss_pred CCCceeEEecccCCCchhhh------ccCCCCCcccCHHHHHHHHhhC-------------------CCceeeCCCCCee
Q 046036 392 GNDFKALAFEFMPNGSLESW------LHPNEATRRLDLAEGLKIAVDI-------------------PSNVLLDYDMTAY 446 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~------L~~~~~~~~l~~~~~~~ia~~i-------------------~~NILld~~~~~k 446 (614)
..+..++||||+++|+|.++ +... ....+++..+..++.++ |+||+++.++.+|
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~k 192 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVK 192 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEE
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEE
Confidence 45678999999999999999 5542 24568898888877666 8999999999999
Q ss_pred ecccccccccCCCCCCCCCCCcCcccccccccccc-cc--cC-CCCc-cCceeehhHHHHHHHhCCCCCCcccccCchHH
Q 046036 447 VGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VA-RYQH-KGKGYSCGILLLEIMTGKRPTDEMFADCLSLH 521 (614)
Q Consensus 447 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~-~~~~-k~DVySfGvvllElltG~~p~~~~~~~~~~l~ 521 (614)
|+|||+++..... ......||+.|+| |. .. .++. ++|||||||+++||+||+.||...... ....
T Consensus 193 l~dfg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~ 262 (348)
T 2pml_X 193 LSDFGESEYMVDK---------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VELF 262 (348)
T ss_dssp ECCCTTCEECBTT---------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHHH
T ss_pred Eeccccccccccc---------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHH
Confidence 9999999876433 1334679999976 87 22 4555 999999999999999999999753221 1111
Q ss_pred HHHHhh---CCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 522 NFCEMA---LPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 522 ~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
..+... ++....... ... ............-..+.++...|++.+|++|||+.|+++
T Consensus 263 ~~i~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 263 NNIRTKNIEYPLDRNHFL-----YPL-----TNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHTSCCCCCCCSSSSST-----TTT-----CC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHhccCcCCccchhhhh-----ccc-----cccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111100 000000000 000 000000000111223456777999999999999999986
No 349
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.74 E-value=5.6e-19 Score=178.73 Aligned_cols=152 Identities=20% Similarity=0.194 Sum_probs=112.4
Q ss_pred CCCCceeEEecccCC-CchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeC-CCCCeeeccc
Q 046036 391 GGNDFKALAFEFMPN-GSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLD-YDMTAYVGDF 450 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~-GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld-~~~~~kl~Df 450 (614)
..++..++||||+.. |+|.+++... ..+++..+..++.++ |+||+++ +++.+||+||
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred ecCCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 345678999999986 8999999753 358888888877776 9999999 7899999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCC-CCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VAR-YQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~-~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
|+++...... .....||+.|+| |+ ... .+.++|||||||++|||+||+.||..... .
T Consensus 195 g~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~--- 255 (320)
T 3a99_A 195 GSGALLKDTV---------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------I--- 255 (320)
T ss_dssp TTCEECCSSC---------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------H---
T ss_pred cccccccccc---------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------h---
Confidence 9998765432 234679999977 87 333 47889999999999999999999964210 0
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
....... +. .. ...+.+++..|++.+|++|||+.|+++
T Consensus 256 -------------~~~~~~~-~~---~~-------~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 256 -------------IRGQVFF-RQ---RV-------SSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -------------HHCCCCC-SS---CC-------CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------------hcccccc-cc---cC-------CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000 00 00 112345677999999999999999986
No 350
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.74 E-value=5.1e-19 Score=185.91 Aligned_cols=183 Identities=17% Similarity=0.136 Sum_probs=114.8
Q ss_pred CceeEEecccCCCchhhhccCC-CCCcccCHHHHHHHHhhC------------------CCceeeCCC-CCeeecccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPN-EATRRLDLAEGLKIAVDI------------------PSNVLLDYD-MTAYVGDFGLA 453 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~ia~~i------------------~~NILld~~-~~~kl~DfGla 453 (614)
.+.++||||+++ ++.+.+... .....+++..+..++.++ |+|||++.+ +.+||+|||++
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 346799999997 666665421 123468888888777776 999999965 56899999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALP 529 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~ 529 (614)
+.+..... .....||++|+| |+ . ..++.++|||||||++|||++|+.||...... ..+.......-.
T Consensus 205 ~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~ 275 (420)
T 1j1b_A 205 KQLVRGEP--------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGT 275 (420)
T ss_dssp EECCTTCC--------CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCS
T ss_pred hhcccCCC--------ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 87654321 234678999977 87 3 36899999999999999999999999763221 122222222111
Q ss_pred CChHHHHHHHHhcCcCC--CCC-CchhhHHHH-HHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 530 ESVMELVYSRLLQGVDK--DAE-DEPCMKAKI-RECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 530 ~~~~~~~~~~l~~~~~~--~~~-~~~~~~~~~-~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.. .+.+.. +...... .+. ....+...+ ...-..+.++..+|++.+|++|||+.|+++
T Consensus 276 p~-~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 276 PT-REQIRE-MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CC-HHHHHH-HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CC-HHHHHh-hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 11 111111 1111000 000 000010000 011134556778999999999999999985
No 351
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.2e-17 Score=155.57 Aligned_cols=129 Identities=25% Similarity=0.331 Sum_probs=70.1
Q ss_pred cEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCc-cccCCCCCCcccccccccccceEecCCCccccccchhhh
Q 046036 66 RILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPF-SIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLE 144 (614)
Q Consensus 66 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~ 144 (614)
+.|++++|.++ .+|..+.. +|++|+|++|++++..+. .|+.+++|++|+ |++|+|++..|..|.
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~------------Ls~N~l~~~~~~~~~ 75 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLE------------LKRNQLTGIEPNAFE 75 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEE------------CCSSCCCCBCTTTTT
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEE------------CCCCCCCCcCHhHcC
Confidence 44555555553 44443332 555555555555544332 245555555444 555555555555555
Q ss_pred ccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCC
Q 046036 145 NLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSD 209 (614)
Q Consensus 145 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 209 (614)
.+++|++|+|++|+|++..+..+..+++|++|+|++|+|++..|..|..+++|++|+|++|.+++
T Consensus 76 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 76 GASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp TCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 55555555555555555555555555556666666666655555555556666666666666554
No 352
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.74 E-value=1.8e-18 Score=178.82 Aligned_cols=173 Identities=16% Similarity=0.170 Sum_probs=110.8
Q ss_pred eeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccccC
Q 046036 396 KALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARFLP 457 (614)
Q Consensus 396 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~~~ 457 (614)
.++||||++ |+|.+++.. .+++..+..++.++ |+||+++.++.+||+|||+++...
T Consensus 122 ~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 489999999 699998853 38888888887777 999999999999999999998654
Q ss_pred CCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh-CCCC-
Q 046036 458 TNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA-LPES- 531 (614)
Q Consensus 458 ~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~-~~~~- 531 (614)
.. .....||++|+| |. . ..++.++||||+||+++||+||+.||....... .+....... .+..
T Consensus 196 ~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 264 (371)
T 4exu_A 196 AE----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTE 264 (371)
T ss_dssp --------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHH
T ss_pred cC----------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHH
Confidence 32 234678999977 86 3 678999999999999999999999997532211 111111111 1100
Q ss_pred ----h-HHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 532 ----V-MELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 532 ----~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+ .......+.. ....+.. .+.......-..+.++...|++.+|++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQS-LPQTPRK--DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHTTCSCHHHHHHHHH-SCCCCCC--CHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhhhhhhhhhhhc-cCCCcch--hHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 0111111111 1111111 111111112234556778999999999999999985
No 353
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.74 E-value=3.3e-18 Score=182.13 Aligned_cols=112 Identities=18% Similarity=0.190 Sum_probs=83.0
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
.+..|+||||+. |+|.+++... ..+++..+..++.++ |+|||++.++.+||+|||+++
T Consensus 129 ~~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 129 FDELYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp CCCEEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred CceEEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccch
Confidence 356899999986 6999999753 358888888887777 999999999999999999999
Q ss_pred ccCCCCCCCCC--------------------CCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCC
Q 046036 455 FLPTNVTNPMK--------------------GQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKR 508 (614)
Q Consensus 455 ~~~~~~~~~~~--------------------~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~ 508 (614)
........... .....+..+||++|+| |+ ...++.++|||||||++|||+||..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~ 282 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTST
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcc
Confidence 76533211000 0012345689999977 85 4568999999999999999999433
No 354
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.74 E-value=1.9e-18 Score=178.01 Aligned_cols=176 Identities=16% Similarity=0.130 Sum_probs=103.5
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
...++||||+ +|+|.+++.. ..+++..+..++.++ |+|||++.++.+||+|||+++.
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 4579999999 6799999874 358888888887777 9999999999999999999986
Q ss_pred cCCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhC-CC
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMAL-PE 530 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~-~~ 530 (614)
.... .+...||++|+| |. . ..++.++||||+||+++||+||+.||.+.... ..+....+... |.
T Consensus 182 ~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~ 250 (367)
T 2fst_X 182 TADE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 250 (367)
T ss_dssp -------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCC
T ss_pred cccc----------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCC
Confidence 5432 234679999977 87 3 57899999999999999999999999753221 11111111111 10
Q ss_pred -----C-hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 531 -----S-VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 531 -----~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
. ..+.....+.. ....+.. .+.......-..+.++...|++.+|++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 251 AELLKKISSESARNYIQS-LTQMPKM--NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHTTCCCHHHHHHHHT-SCCCCCC--CHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhhHHHHHHHhc-cCCCCCC--CHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0 01111111111 1111111 111111111233456778999999999999999985
No 355
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.73 E-value=5.5e-19 Score=192.25 Aligned_cols=113 Identities=27% Similarity=0.352 Sum_probs=93.0
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCC---eeeccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMT---AYVGDF 450 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~---~kl~Df 450 (614)
.++..++|||||++|+|.+++........+++..+..++.++ |+||+++.++. +||+||
T Consensus 89 ~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 89 PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp TTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred CCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccc
Confidence 356789999999999999999865444457877777777766 99999997665 899999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCc
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDE 512 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~ 512 (614)
|+++....... .....||++|+| |. ...++.++|||||||++|||+||+.||..
T Consensus 169 G~a~~~~~~~~--------~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 169 GYAKELDQGEL--------CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp CCCCBTTSCCC--------CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccccc--------cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 99987754421 334689999976 87 67889999999999999999999999965
No 356
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.73 E-value=2e-18 Score=178.59 Aligned_cols=108 Identities=20% Similarity=0.264 Sum_probs=86.1
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC-------------------CCceeeC------CCCCeeec
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI-------------------PSNVLLD------YDMTAYVG 448 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i-------------------~~NILld------~~~~~kl~ 448 (614)
...++||||+ +|+|.+++.... ...+++..+.+++.++ |+|||++ ..+.+||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~ 180 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIA 180 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEEC
T ss_pred ceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEc
Confidence 3679999999 889999997542 3358888887777665 9999994 44589999
Q ss_pred ccccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 449 DFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 449 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
|||+++..... .....||+.|+| |. ...++.++|||||||+++||+||+.||...
T Consensus 181 Dfg~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 238 (373)
T 1q8y_A 181 DLGNACWYDEH----------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPD 238 (373)
T ss_dssp CCTTCEETTBC----------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---
T ss_pred ccccccccCCC----------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999876543 223578999977 87 667899999999999999999999999754
No 357
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.73 E-value=1.4e-18 Score=183.31 Aligned_cols=170 Identities=18% Similarity=0.264 Sum_probs=102.9
Q ss_pred CCCceeEEecccCCCchhhhccCCCCC-ccc---CHHHHHHHHhhC------------------CCceeeCCC-------
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEAT-RRL---DLAEGLKIAVDI------------------PSNVLLDYD------- 442 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~-~~l---~~~~~~~ia~~i------------------~~NILld~~------- 442 (614)
.++..++|||||+ |+|.+++...... ... .+..+.+++.++ |+|||++.+
T Consensus 80 ~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~ 158 (434)
T 2rio_A 80 TDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQ 158 (434)
T ss_dssp CSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCC
T ss_pred cCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCccccccc
Confidence 4567899999996 6999999764311 111 222223344444 999999754
Q ss_pred ------CCeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--c-------CCCCccCceeehhHHHHHHHh-
Q 046036 443 ------MTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-------ARYQHKGKGYSCGILLLEIMT- 505 (614)
Q Consensus 443 ------~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-------~~~~~k~DVySfGvvllEllt- 505 (614)
+.+||+|||+++........ .........||++|+| |. . ..++.++|||||||+++||+|
T Consensus 159 ~~~~~~~~~kL~DFG~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~ 235 (434)
T 2rio_A 159 QTGAENLRILISDFGLCKKLDSGQSS---FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235 (434)
T ss_dssp TTCCCSCEEEECCCTTCEECCC-----------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccCCCceEEEEcccccceecCCCCcc---ceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhC
Confidence 58999999999987654321 0011234689999977 86 2 568899999999999999999
Q ss_pred CCCCCCcccccCchHHHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHH
Q 046036 506 GKRPTDEMFADCLSLHNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVRE 585 (614)
Q Consensus 506 G~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~e 585 (614)
|+.||....... .... ............. . ......+.+++..|++.+|++|||+.|
T Consensus 236 g~~Pf~~~~~~~---~~i~----------------~~~~~~~~~~~~~-~---~~~~~~~~~li~~~L~~dP~~Rps~~e 292 (434)
T 2rio_A 236 GKHPFGDKYSRE---SNII----------------RGIFSLDEMKCLH-D---RSLIAEATDLISQMIDHDPLKRPTAMK 292 (434)
T ss_dssp SCCTTCSTTTHH---HHHH----------------HTCCCCCCCTTCC-C---HHHHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCCCCchhhH---HHHh----------------cCCCCcccccccc-c---ccchHHHHHHHHHHhhCChhhCCCHHH
Confidence 999997532211 1111 1111100000000 0 122234556788999999999999999
Q ss_pred HHH
Q 046036 586 MVM 588 (614)
Q Consensus 586 v~~ 588 (614)
|++
T Consensus 293 il~ 295 (434)
T 2rio_A 293 VLR 295 (434)
T ss_dssp HHT
T ss_pred HHh
Confidence 985
No 358
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.73 E-value=3.4e-18 Score=175.48 Aligned_cols=187 Identities=17% Similarity=0.131 Sum_probs=116.5
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~ 454 (614)
....++||||++ |+|.+++... .+++..+..++.++ |+||+++.++.+||+|||+++
T Consensus 86 ~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 86 FNEVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp CCCEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred cceEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 456899999998 5999998743 48888888888777 999999999999999999998
Q ss_pred ccCCCCCCCC---CCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh-
Q 046036 455 FLPTNVTNPM---KGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM- 526 (614)
Q Consensus 455 ~~~~~~~~~~---~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~- 526 (614)
.......... ..........||+.|+| |. ...++.++|||||||+++||++|+.||........ +......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~ 239 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGII 239 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHh
Confidence 7654321100 00011234579999977 86 46789999999999999999999999975422111 1111110
Q ss_pred hCCC--C-----hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPE--S-----VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~--~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
..+. . ........+... ...+.. ............+.++...|++.+|++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSL-PMYPAA--PLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTS-CCCCCC--CHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCchhccccccccchhhHHhhcc-cCCCCc--chhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0110 0 001111111111 000000 000000112234456778999999999999999986
No 359
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.73 E-value=1.4e-18 Score=181.85 Aligned_cols=117 Identities=16% Similarity=0.203 Sum_probs=83.0
Q ss_pred CCCceeEEecccCCCchhhhccCCC------CCcccCHHHHHHHHhhC------------------CCceee----CCCC
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNE------ATRRLDLAEGLKIAVDI------------------PSNVLL----DYDM 443 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~------~~~~l~~~~~~~ia~~i------------------~~NILl----d~~~ 443 (614)
.....++||||+++ +|.+++.... ....+++..+..|+.++ |+|||+ +.++
T Consensus 91 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 91 ADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp TTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTT
T ss_pred CCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCC
Confidence 45678999999985 8888875321 12348888888888777 999999 7789
Q ss_pred CeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcc
Q 046036 444 TAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEM 513 (614)
Q Consensus 444 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~ 513 (614)
.+||+|||+++........ .......+||++|+| |. . ..++.++|||||||++|||+||+.||...
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKP----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp CEEECCTTCCC--------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred cEEEEECCCceecCCCCcc----cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 9999999999876543211 112345789999977 87 3 45899999999999999999999999753
No 360
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.73 E-value=2.6e-18 Score=181.30 Aligned_cols=115 Identities=20% Similarity=0.228 Sum_probs=85.7
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccc
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~ 455 (614)
+..|+|||||+ |+|.+++... ..+++..+..++.++ |+|||++.++.+||+|||+++.
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CeEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 56899999998 5999999753 358998888888877 9999999999999999999997
Q ss_pred cCCCCCCCC---------------CCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCc
Q 046036 456 LPTNVTNPM---------------KGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDE 512 (614)
Q Consensus 456 ~~~~~~~~~---------------~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~ 512 (614)
......... ......+..+||++|+| |. ...++.++||||+||+++||++|..|+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 754321100 00012356789999977 85 55689999999999999999997666543
No 361
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.73 E-value=2.3e-20 Score=205.74 Aligned_cols=290 Identities=14% Similarity=0.110 Sum_probs=168.7
Q ss_pred CCCCCCeeeecCC-ccccc-CCcCCCCCCCCcEEecccccCcccCCcChhhhc-cccccccEEEccCCc--ccc-cCCCC
Q 046036 9 NLFRLQNLNFGNS-TVQGE-IPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFT-NLSTKLRILDAGGNQ--FAG-DIPAG 82 (614)
Q Consensus 9 ~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~-~l~~~L~~L~L~~N~--l~~-~~p~~ 82 (614)
.+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+..+. .++ +|++|+|++|. ++. .++..
T Consensus 128 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~-~L~~L~l~~~~~~~~~~~l~~l 206 (594)
T 2p1m_B 128 SFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT-SLVSLNISCLASEVSFSALERL 206 (594)
T ss_dssp HCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC-CCCEEECTTCCSCCCHHHHHHH
T ss_pred hCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC-cCcEEEecccCCcCCHHHHHHH
Confidence 4667777777766 44432 333334566777777777766654444433222 343 66666666665 211 01111
Q ss_pred CcCCCCCCEEeccCC-cCcccCCcc------------------------------ccCCCCCCcc-cc-------ccc--
Q 046036 83 IPKYFNLIQLGLDRN-CLAGSIPFS------------------------------IGKLQNLQKL-NP-------LAT-- 121 (614)
Q Consensus 83 ~~~l~~L~~L~L~~N-~l~~~~p~~------------------------------~~~l~~L~~L-~l-------~~~-- 121 (614)
+..+++|++|+|++| .++ .+|.. +.++++|+.| .+ ++.
T Consensus 207 ~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~ 285 (594)
T 2p1m_B 207 VTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVY 285 (594)
T ss_dssp HHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGH
T ss_pred HHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHH
Confidence 223466666666665 222 23333 3444444444 11 111
Q ss_pred --ccccceEecCCCccccccc-hhhhccCCCCeeecccccCCCC-CCCCCCCCCCCCEEEc---------CCCCCccCCc
Q 046036 122 --SLYSFQLNLAENNLTGNIP-ESLENLTSLQILNLSCNHLGGS-IPKPSGLFSTLSSIDF---------AHNNFNGSLP 188 (614)
Q Consensus 122 --~~~l~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L---------s~N~l~~~~~ 188 (614)
.-+++.|+|++|.+++... ..+..+++|+.|++++| +... ++.....+++|++|++ +.+.+++...
T Consensus 286 ~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l 364 (594)
T 2p1m_B 286 SVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGL 364 (594)
T ss_dssp HHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHH
T ss_pred HhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHH
Confidence 1278899999999875433 33568899999999988 4311 1222224678888888 3345554333
Q ss_pred cccc-CCCCCceeccCCccCCCCcccccc-CcccchHHhcc--C----cccccc-----CCccccCCCccceEEccCCcC
Q 046036 189 LEVG-SLSNTQELDFSEHMLSDEIPITLG-NRSKFEHLLLG--G----NMFQGR-----IPPFFGSFKGTIDLNLSHNNL 255 (614)
Q Consensus 189 ~~~~-~l~~L~~L~ls~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l 255 (614)
..+. .+++|+.|+++.|.+++.....+. .+++|+.|+++ + |.++.. ++..+..+++|+.|+|++ .+
T Consensus 365 ~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l 443 (594)
T 2p1m_B 365 VSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LL 443 (594)
T ss_dssp HHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SC
T ss_pred HHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cc
Confidence 3333 478888888888888765555554 47788888888 3 455421 112255677888888876 66
Q ss_pred cccCCcccCC-CCCCCEEECcCCcCcccCC-Cc-cccCCCceEEEecCCC
Q 046036 256 SGTIPKELET-LPFLENLNLSFNNFEGQLP-SM-SVFTNTSVISIVGNGK 302 (614)
Q Consensus 256 ~~~~p~~~~~-l~~L~~L~ls~N~l~~~~p-~~-~~~~~l~~~~~~~N~~ 302 (614)
++..+..+.. +++|+.|++++|.+++... .. ..+++++.+++.+|+.
T Consensus 444 ~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 444 TDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred cHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 6544444444 7778888888888764322 11 3367788888888764
No 362
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.73 E-value=1.6e-18 Score=174.79 Aligned_cols=152 Identities=20% Similarity=0.265 Sum_probs=110.3
Q ss_pred CCCCceeEEecc-cCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeC-CCCCeeeccc
Q 046036 391 GGNDFKALAFEF-MPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLD-YDMTAYVGDF 450 (614)
Q Consensus 391 ~~~~~~~LV~Ey-~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld-~~~~~kl~Df 450 (614)
...+..++|||| +++|+|.+++... ..+++..+..++.++ |+||+++ .++.+||+||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~df 184 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDF 184 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEc
Confidence 445678999999 8999999999753 358899888888877 9999999 8899999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc--cCCC-CccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHh
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW--VARY-QHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEM 526 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~~~~-~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~ 526 (614)
|+++...... .....||+.|+| |+ ...+ +.++|||||||+++||++|+.||....
T Consensus 185 g~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------ 243 (312)
T 2iwi_A 185 GSGALLHDEP---------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------ 243 (312)
T ss_dssp SSCEECCSSC---------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------
T ss_pred chhhhcccCc---------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------
Confidence 9998765432 234679999977 87 3333 568999999999999999999996421
Q ss_pred hCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 527 ALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 527 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+... ..... +. ..-..+.+++..|++.+|++|||+.|+++
T Consensus 244 -------~~~~----~~~~~-~~----------~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 -------EILE----AELHF-PA----------HVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -------HHHH----TCCCC-CT----------TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------HHhh----hccCC-cc----------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00000 00 00112345677999999999999999986
No 363
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.73 E-value=6.5e-18 Score=169.27 Aligned_cols=169 Identities=21% Similarity=0.319 Sum_probs=106.1
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
..+..++||||+++|+|.+++... ...+++....+++.++ |+||+++.++.+||+|||++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcch
Confidence 356789999999999999999753 2357777777777666 99999999999999999999
Q ss_pred cccCCCCCCCC-------CCCcCcccccccccccc-cc---cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHH
Q 046036 454 RFLPTNVTNPM-------KGQSNSAAVWGSIGYNM-EW---VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHN 522 (614)
Q Consensus 454 ~~~~~~~~~~~-------~~~~~~~~~~gt~~y~a-E~---~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~ 522 (614)
+.......... ..........||+.|+| |. ...++.++|||||||++|||++ |+......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~------ 234 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER------ 234 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH------
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH------
Confidence 87643211000 00112334679999977 87 3468999999999999999998 55421110
Q ss_pred HHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 523 FCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.. ..+.......+.. .. ......+.++...|++.+|++|||+.|+++
T Consensus 235 ----------~~~~-~~~~~~~~~~~~~---~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 235 ----------VNIL-KKLRSVSIEFPPD---FD---DNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp ----------HHHH-HHHHSTTCCCCTT---CC---TTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----------HHHH-HhccccccccCcc---cc---ccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 0011 1111111000100 00 011223446777999999999999999986
No 364
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.72 E-value=5.8e-18 Score=178.14 Aligned_cols=166 Identities=16% Similarity=0.220 Sum_probs=101.0
Q ss_pred CCCCceeEEecccCCCchhhhccCCCCCcccC----HHHHHHHHhhC--------------CCceeeC-----CCCCeee
Q 046036 391 GGNDFKALAFEFMPNGSLESWLHPNEATRRLD----LAEGLKIAVDI--------------PSNVLLD-----YDMTAYV 447 (614)
Q Consensus 391 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~----~~~~~~ia~~i--------------~~NILld-----~~~~~kl 447 (614)
..++..++|||||+ |+|.+++..... .+. +....+|+.++ |+|||++ ....+||
T Consensus 88 ~~~~~~~lv~E~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL 164 (432)
T 3p23_A 88 KDRQFQYIAIELCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMI 164 (432)
T ss_dssp EETTEEEEEEECCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEE
T ss_pred ecCCEEEEEEECCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEE
Confidence 34567899999997 599999976431 122 22223333333 9999994 3346889
Q ss_pred cccccccccCCCCCCCCCCCcCcccccccccccc-cc-----cCCCCccCceeehhHHHHHHHh-CCCCCCcccccCchH
Q 046036 448 GDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-----VARYQHKGKGYSCGILLLEIMT-GKRPTDEMFADCLSL 520 (614)
Q Consensus 448 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-----~~~~~~k~DVySfGvvllEllt-G~~p~~~~~~~~~~l 520 (614)
+|||+++........ ........||++|+| |. ...++.++|||||||+++||+| |+.||......
T Consensus 165 ~DFG~a~~~~~~~~~----~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---- 236 (432)
T 3p23_A 165 SDFGLCKKLAVGRHS----FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---- 236 (432)
T ss_dssp CCTTEEECC----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH----
T ss_pred ecccceeeccCCCcc----eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH----
Confidence 999999877543211 122345789999977 87 2456779999999999999999 89998642111
Q ss_pred HHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 521 HNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.....+... ........ ...-..+.+++..|++.+|++|||+.||++
T Consensus 237 --------------~~~~~~~~~-~~~~~~~~------~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 237 --------------QANILLGAC-SLDCLHPE------KHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp --------------HHHHHTTCC-CCTTSCTT------CHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --------------HHHHHhccC-CccccCcc------ccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 000011110 00000000 011122346777999999999999999994
No 365
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.72 E-value=1.3e-20 Score=207.58 Aligned_cols=288 Identities=14% Similarity=0.100 Sum_probs=186.0
Q ss_pred CCCCCCeeeecCCcccccCCcCCC-CCCCCcEEecccc-cCcccCCcChhhhccccccccEEEccCCcccccCCCCC---
Q 046036 9 NLFRLQNLNFGNSTVQGEIPSHLS-PTSKLTYLSLFSN-NLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGI--- 83 (614)
Q Consensus 9 ~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N-~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~--- 83 (614)
++++|++|+|++|.+++..+..+. .+++|++|+|++| .++......+ +.+++ +|++|+|++|.+++..+..+
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~--~~~~~-~L~~L~L~~~~i~~~~~~~l~~~ 179 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAI--AATCR-NLKELDLRESDVDDVSGHWLSHF 179 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHH--HHHCT-TCCEEECTTCEEECCCGGGGGGS
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHH--HHhCC-CCCEEeCcCCccCCcchHHHHHH
Confidence 467788888888877766666664 5778888888877 4543211121 33566 78888888888765443333
Q ss_pred -cCCCCCCEEeccCCc--Ccc-cCCccccCCCCCCcccccccc------------cccceEecCCCc-------------
Q 046036 84 -PKYFNLIQLGLDRNC--LAG-SIPFSIGKLQNLQKLNPLATS------------LYSFQLNLAENN------------- 134 (614)
Q Consensus 84 -~~l~~L~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~l~~~~------------~~l~~L~L~~N~------------- 134 (614)
..+++|++|+|++|. ++. .++..+..+++|+.|++.... -+++.|+++.+.
T Consensus 180 ~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~ 259 (594)
T 2p1m_B 180 PDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSV 259 (594)
T ss_dssp CTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHH
T ss_pred hhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHH
Confidence 356688888888776 221 112223446778877763320 156666654431
Q ss_pred -------------cc----cccchhhhccCCCCeeecccccCCCCC-CCCCCCCCCCCEEEcCCCCCccC-CcccccCCC
Q 046036 135 -------------LT----GNIPESLENLTSLQILNLSCNHLGGSI-PKPSGLFSTLSSIDFAHNNFNGS-LPLEVGSLS 195 (614)
Q Consensus 135 -------------l~----~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~ 195 (614)
+. ..++..+..+++|++|+|++|.+++.. ...+..+++|++|++++| ++.. ++.....++
T Consensus 260 ~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~ 338 (594)
T 2p1m_B 260 ALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCK 338 (594)
T ss_dssp HHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCT
T ss_pred HHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCC
Confidence 11 123444457899999999999976432 222457899999999998 5422 222234589
Q ss_pred CCceecc---------CCccCCCCcccccc-CcccchHHhccCccccccCCcccc-CCCccceEEcc--C----CcCccc
Q 046036 196 NTQELDF---------SEHMLSDEIPITLG-NRSKFEHLLLGGNMFQGRIPPFFG-SFKGTIDLNLS--H----NNLSGT 258 (614)
Q Consensus 196 ~L~~L~l---------s~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~ 258 (614)
+|++|++ +.+.+++.....+. .+++|+.|.++.|.+++.....+. .+++|+.|+++ + |.++..
T Consensus 339 ~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~ 418 (594)
T 2p1m_B 339 DLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLE 418 (594)
T ss_dssp TCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCC
T ss_pred CCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCC
Confidence 9999998 34566544333333 478999999999998866655555 58999999999 4 566632
Q ss_pred -----CCcccCCCCCCCEEECcCCcCcccC-CCccc-cCCCceEEEecCC
Q 046036 259 -----IPKELETLPFLENLNLSFNNFEGQL-PSMSV-FTNTSVISIVGNG 301 (614)
Q Consensus 259 -----~p~~~~~l~~L~~L~ls~N~l~~~~-p~~~~-~~~l~~~~~~~N~ 301 (614)
++..+..+++|+.|++++ .+++.. +.... +++++.+++.+|.
T Consensus 419 ~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~ 467 (594)
T 2p1m_B 419 PLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAG 467 (594)
T ss_dssp CTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCC
T ss_pred chhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCC
Confidence 122366789999999987 555432 22222 6789999999886
No 366
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.72 E-value=4.1e-18 Score=172.11 Aligned_cols=162 Identities=22% Similarity=0.213 Sum_probs=101.9
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC-------------------CCceeeCCCCCeeeccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI-------------------PSNVLLDYDMTAYVGDFGL 452 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i-------------------~~NILld~~~~~kl~DfGl 452 (614)
.++..++||||+ ++.+....... ...+++..+..++.++ |+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 171 (318)
T 2dyl_A 95 TNTDVFIAMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGI 171 (318)
T ss_dssp CSSEEEEEECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred cCCcEEEEEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCC
Confidence 456789999999 44555544321 2357887777776655 9999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCcccccccccccc-cc-------cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHH
Q 046036 453 ARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-------VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFC 524 (614)
Q Consensus 453 a~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-------~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~ 524 (614)
++...... ......||+.|+| |. ...++.++|||||||+++||+||+.||......
T Consensus 172 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------- 235 (318)
T 2dyl_A 172 SGRLVDDK--------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-------- 235 (318)
T ss_dssp C----------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH--------
T ss_pred chhccCCc--------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc--------
Confidence 97665432 1234679999977 76 235788999999999999999999999752211
Q ss_pred HhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 525 EMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+.+...+.......+.. ... ...+.++...|++.+|.+||++.|+++
T Consensus 236 --------~~~~~~~~~~~~~~~~~~-~~~-------~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 236 --------FEVLTKVLQEEPPLLPGH-MGF-------SGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp --------HHHHHHHHHSCCCCCCSS-SCC-------CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --------HHHHHHHhccCCCCCCcc-CCC-------CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111222222211111110 001 122345677999999999999999986
No 367
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.72 E-value=3.7e-18 Score=175.28 Aligned_cols=174 Identities=16% Similarity=0.174 Sum_probs=110.1
Q ss_pred ceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeeccccccccc
Q 046036 395 FKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARFL 456 (614)
Q Consensus 395 ~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~~ 456 (614)
..++||||++ |+|.+++.. .+++..+..++.++ |+||+++.++.+||+|||+++..
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred eEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 3589999998 699998853 38888888887777 99999999999999999999865
Q ss_pred CCCCCCCCCCCcCcccccccccccc-cc--c-CCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhh-CCC-
Q 046036 457 PTNVTNPMKGQSNSAAVWGSIGYNM-EW--V-ARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMA-LPE- 530 (614)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~gt~~y~a-E~--~-~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~-~~~- 530 (614)
... .....||+.|+| |. . ..++.++|||||||+++||+||+.||....... .+....... .+.
T Consensus 177 ~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 245 (353)
T 3coi_A 177 DAE----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGT 245 (353)
T ss_dssp -----------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCH
T ss_pred CCC----------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCH
Confidence 432 234678999977 86 3 578999999999999999999999997532211 111111111 010
Q ss_pred ----Ch-HHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 531 ----SV-MELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 531 ----~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
.+ .......+. .....+... +..........+.++...|++.+|++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 246 EFVQKLNDKAAKSYIQ-SLPQTPRKD--FTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHTTCSCHHHHHHHH-TSCBCSSCC--TTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHhhHHHHHHHH-hCcCCCCcc--HHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 011111111 111111100 00000111223456777999999999999999985
No 368
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.71 E-value=5.4e-18 Score=169.79 Aligned_cols=149 Identities=19% Similarity=0.269 Sum_probs=102.3
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCC---CCCeeecccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDY---DMTAYVGDFG 451 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~---~~~~kl~DfG 451 (614)
+...++||||+++|+|.+++.... ...+++..+..++.++ |+||+++. ++.+||+|||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred CceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 566899999999999999998642 3468899888888877 99999998 7899999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccccccCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCCC
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNMEWVARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPES 531 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aE~~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~~ 531 (614)
+++.... ..++.++||||+||+++||+||+.||......... ......
T Consensus 166 ~a~~~~~--------------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------~~~~~~ 213 (299)
T 3m2w_A 166 FAKETTG--------------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------PGMKTR 213 (299)
T ss_dssp TCEECTT--------------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------CCSCCS
T ss_pred ccccccc--------------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh------HHHHHH
Confidence 9975432 23567899999999999999999999753221100 000000
Q ss_pred hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 532 VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
+... ...... .........+.++...|++.+|++|||+.|+++
T Consensus 214 --------~~~~---~~~~~~---~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 214 --------IRMG---QYEFPN---PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp --------SCTT---CCSSCH---HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --------Hhhc---cccCCc---hhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000 000000 000011223446777999999999999999986
No 369
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=1.9e-17 Score=150.60 Aligned_cols=132 Identities=23% Similarity=0.231 Sum_probs=64.4
Q ss_pred CCCcEEecccccCc-ccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCC
Q 046036 35 SKLTYLSLFSNNLH-GIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNL 113 (614)
Q Consensus 35 ~~L~~L~L~~N~l~-~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 113 (614)
++|++|+|++|.++ +.+|.. +..++ +|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~---~~~l~-~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 97 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGL---TAEFV-NLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNL 97 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSC---CGGGG-GCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTC
T ss_pred ccCCEEECCCCCCChhhHHHH---HHhCC-CCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCC
Confidence 34555555555554 344444 33343 455555555555432 444555555555555555554444444445555
Q ss_pred CcccccccccccceEecCCCccccccc-hhhhccCCCCeeecccccCCCCCC---CCCCCCCCCCEEEcCCCCCc
Q 046036 114 QKLNPLATSLYSFQLNLAENNLTGNIP-ESLENLTSLQILNLSCNHLGGSIP---KPSGLFSTLSSIDFAHNNFN 184 (614)
Q Consensus 114 ~~L~l~~~~~~l~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 184 (614)
++|+ |++|++++... ..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 98 ~~L~------------Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 98 THLN------------LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CEEE------------CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred CEEe------------ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5444 55555553221 445555555555555555553222 24445555555555555554
No 370
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=1.6e-17 Score=154.68 Aligned_cols=131 Identities=20% Similarity=0.247 Sum_probs=112.1
Q ss_pred CeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCc
Q 046036 150 QILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGN 229 (614)
Q Consensus 150 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N 229 (614)
+.+++++|.++ .+|..+. ++|++|+|++|.|+ .+|..|..+++|+.|+|++|.|++..+..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56788888887 5666543 57889999999888 67788888999999999999998888888999999999999999
Q ss_pred cccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCC
Q 046036 230 MFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLP 284 (614)
Q Consensus 230 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 284 (614)
+|++..|..|..+++|+.|+|++|+|+...+..|..+++|+.|++++|++.+...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9998888889999999999999999997777789999999999999999986543
No 371
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=3.4e-17 Score=166.28 Aligned_cols=104 Identities=12% Similarity=0.011 Sum_probs=94.8
Q ss_pred ccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCc-eeccCCccCCCCccccccCcccchH
Q 046036 145 NLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQ-ELDFSEHMLSDEIPITLGNRSKFEH 223 (614)
Q Consensus 145 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~ls~N~l~~~~~~~~~~l~~L~~ 223 (614)
.+++|+.|+|++|+++...+..|..+++|+.|+|++| ++...+..|.++.+|+ .+++++ .++.+.+.+|.++++|+.
T Consensus 224 ~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 224 YMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp HCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred hcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 4899999999999999777778999999999999998 8877778899999999 999998 788788899999999999
Q ss_pred HhccCccccccCCccccCCCccceEEc
Q 046036 224 LLLGGNMFQGRIPPFFGSFKGTIDLNL 250 (614)
Q Consensus 224 L~L~~N~l~~~~p~~~~~l~~L~~L~L 250 (614)
|++++|.++...+.+|.++++|+.++.
T Consensus 302 l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 302 VLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEeCCCccCccchhhhcCCcchhhhcc
Confidence 999999999888889999999999874
No 372
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.70 E-value=5.2e-18 Score=172.21 Aligned_cols=165 Identities=21% Similarity=0.201 Sum_probs=97.4
Q ss_pred CCCceeEEecccCCCchhhhccCC--CCCcccCHHHHHHHHhhC-------------------CCceeeCCCCCeeeccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPN--EATRRLDLAEGLKIAVDI-------------------PSNVLLDYDMTAYVGDF 450 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~--~~~~~l~~~~~~~ia~~i-------------------~~NILld~~~~~kl~Df 450 (614)
.++..++||||+++ +|.+++... .....+++..+.+++.++ |+||+++.++.+||+||
T Consensus 92 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Df 170 (327)
T 3aln_A 92 REGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDF 170 (327)
T ss_dssp CSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCC
T ss_pred eCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccC
Confidence 35678999999996 888777521 013357888777776655 99999999999999999
Q ss_pred ccccccCCCCCCCCCCCcCcccccccccccc-cc------cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHH
Q 046036 451 GLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW------VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNF 523 (614)
Q Consensus 451 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~------~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~ 523 (614)
|+++...... ......||+.|+| |. ...++.++|||||||+++||+||+.||.........+
T Consensus 171 g~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--- 239 (327)
T 3aln_A 171 GISGQLVDSI--------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL--- 239 (327)
T ss_dssp SSSCC--------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------
T ss_pred CCceeccccc--------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH---
Confidence 9998765432 1233579999977 76 2357899999999999999999999997532110000
Q ss_pred HHhhCCCChHHHHHHHHhcCcCCCCC-CchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHH
Q 046036 524 CEMALPESVMELVYSRLLQGVDKDAE-DEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVM 588 (614)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~ 588 (614)
...+.......+. ... .....+.+++..|++.+|++|||+.|+++
T Consensus 240 -------------~~~~~~~~~~~~~~~~~-------~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 240 -------------TQVVKGDPPQLSNSEER-------EFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -------------CCCCCSCCCCCCCCSSC-------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -------------HHHhcCCCCCCCCcccc-------cCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 0000000000000 000 01123456777999999999999999986
No 373
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=6.3e-17 Score=147.16 Aligned_cols=132 Identities=26% Similarity=0.233 Sum_probs=109.8
Q ss_pred cccEEEccCCccc-ccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchh
Q 046036 64 KLRILDAGGNQFA-GDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPES 142 (614)
Q Consensus 64 ~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~ 142 (614)
+|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+ |++|++++.+|..
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~------------Ls~N~l~~~~~~~ 90 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLE------------LSENRIFGGLDML 90 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEE------------EESCCCCSCCCHH
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEE------------CcCCcCchHHHHH
Confidence 7899999999997 67888888999999999999999865 6788888888777 9999999878888
Q ss_pred hhccCCCCeeecccccCCCCC-CCCCCCCCCCCEEEcCCCCCccCCc---ccccCCCCCceeccCCccCCC
Q 046036 143 LENLTSLQILNLSCNHLGGSI-PKPSGLFSTLSSIDFAHNNFNGSLP---LEVGSLSNTQELDFSEHMLSD 209 (614)
Q Consensus 143 ~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~ls~N~l~~ 209 (614)
+..+++|++|+|++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+..
T Consensus 91 ~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 91 AEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp HHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred HhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 888999999999999998532 2667888888888888888885554 467888888888888887763
No 374
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=3.5e-17 Score=145.69 Aligned_cols=128 Identities=24% Similarity=0.296 Sum_probs=91.6
Q ss_pred CCCCCeeeecCCccc-ccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCC
Q 046036 10 LFRLQNLNFGNSTVQ-GEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFN 88 (614)
Q Consensus 10 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~ 88 (614)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. .. +.+++ +|++|+|++|.+++.+|..+..+++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~---~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~ 89 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--AN---LPKLN-KLKKLELSDNRVSGGLEVLAEKCPN 89 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TT---CCCCT-TCCEEECCSSCCCSCTHHHHHHCTT
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hh---hhcCC-CCCEEECCCCcccchHHHHhhhCCC
Confidence 467788888888877 67777777778888888888877754 33 56666 7777888888777656666666777
Q ss_pred CCEEeccCCcCccc-CCccccCCCCCCcccccccccccceEecCCCccccccc---hhhhccCCCCeeecc
Q 046036 89 LIQLGLDRNCLAGS-IPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIP---ESLENLTSLQILNLS 155 (614)
Q Consensus 89 L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~ 155 (614)
|++|++++|.+++. .+..++.+++|++|+ +++|.+++..+ ..+..+++|++|+++
T Consensus 90 L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~------------l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 90 LTHLNLSGNKIKDLSTIEPLKKLENLKSLD------------LFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CCEEECTTSCCCSHHHHGGGGGCTTCCEEE------------CTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCEEECCCCcCCChHHHHHHhhCCCCCEEe------------CcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 77777777777753 336677777777666 77777776555 467777777777765
No 375
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.68 E-value=5.5e-18 Score=177.59 Aligned_cols=157 Identities=12% Similarity=0.119 Sum_probs=109.2
Q ss_pred eeEEecccCCCchhhhccC----CCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 396 KALAFEFMPNGSLESWLHP----NEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 396 ~~LV~Ey~~~GsL~~~L~~----~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.+++|+++ .|+|.+++.. ......++|..+..|+.++ |+|||++.++.+||+|||++
T Consensus 180 ~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a 258 (413)
T 3dzo_A 180 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL 258 (413)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred eEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccce
Confidence 56777765 5799998841 1124468888888887777 99999999999999999999
Q ss_pred cccCCCCCCCCCCCcCcccccccccccc-ccc----------C--CCCccCceeehhHHHHHHHhCCCCCCcccccCchH
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNM-EWV----------A--RYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSL 520 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~~----------~--~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l 520 (614)
+..... ....+| ++|+| |+. . .++.++|||||||++|||+||+.||.........
T Consensus 259 ~~~~~~----------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~- 326 (413)
T 3dzo_A 259 VRDGAS----------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGS- 326 (413)
T ss_dssp EETTEE----------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCS-
T ss_pred eecCCc----------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhH-
Confidence 865432 334677 99977 862 1 3677999999999999999999999754321110
Q ss_pred HHHHHhhCCCChHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHH--HHHhHHH
Q 046036 521 HNFCEMALPESVMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVME--MNVIKEV 596 (614)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~--L~~i~~~ 596 (614)
. ..+... . .. ...+.+++..|++.+|++||++.|+++. ++++++.
T Consensus 327 ----~------------~~~~~~-~-------~~-------~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~~~ 373 (413)
T 3dzo_A 327 ----E------------WIFRSC-K-------NI-------PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTE 373 (413)
T ss_dssp ----G------------GGGSSC-C-------CC-------CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHH
T ss_pred ----H------------HHHhhc-c-------cC-------CHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHHHH
Confidence 0 001110 0 00 1234456679999999999999988753 4444433
No 376
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.68 E-value=3.2e-17 Score=182.95 Aligned_cols=149 Identities=20% Similarity=0.330 Sum_probs=108.6
Q ss_pred eeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccccccC
Q 046036 396 KALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLARFLP 457 (614)
Q Consensus 396 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla~~~~ 457 (614)
.|+|||||++|+|.+++.. .++|..+..|+.++ |+|||++.+ .+||+|||+++...
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred eEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 6999999999999998753 58999999998888 999999986 89999999998764
Q ss_pred CCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCCCCcccccCchHHHHHHhhCCCChHHH
Q 046036 458 TNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLSLHNFCEMALPESVMEL 535 (614)
Q Consensus 458 ~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~l~~~~~~~~~~~~~~~ 535 (614)
.. ....||++|+| |+ ....+.++|||||||+++||++|..|+........ +...
T Consensus 233 ~~-----------~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~~~~--- 288 (681)
T 2pzi_A 233 SF-----------GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------PEDD--- 288 (681)
T ss_dssp CC-----------SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------CTTC---
T ss_pred cC-----------CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccccc----------cccc---
Confidence 32 23679999977 87 44558999999999999999999988764321110 0000
Q ss_pred HHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCC-HHHHHHHHHHhHH
Q 046036 536 VYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMG-VREMVMEMNVIKE 595 (614)
Q Consensus 536 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPs-m~ev~~~L~~i~~ 595 (614)
+ .......+.++...|++.+|++||+ +.++...+..+..
T Consensus 289 ----------------~-----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 289 ----------------P-----VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp ----------------H-----HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ----------------c-----ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0 0011123456778999999999995 5666667766543
No 377
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.68 E-value=1.3e-15 Score=158.07 Aligned_cols=246 Identities=10% Similarity=0.053 Sum_probs=189.3
Q ss_pred CCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCC
Q 046036 10 LFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNL 89 (614)
Q Consensus 10 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L 89 (614)
+..++.+.+.+ .++.+...+|.++ +|+.+.|.+| ++.+...+ |.+. +|+.+.|.. .++...+.+|.++.+|
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~a---F~~~--~L~~i~lp~-~l~~I~~~aF~~c~~L 182 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMA---FFNS--TVQEIVFPS-TLEQLKEDIFYYCYNL 182 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTT---TTTC--CCCEEECCT-TCCEECSSTTTTCTTC
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHh---cCCC--CceEEEeCC-CccEehHHHhhCcccC
Confidence 46777887764 5666777888885 7999998876 77666666 5553 788999975 6766667789999999
Q ss_pred CEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCC
Q 046036 90 IQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGL 169 (614)
Q Consensus 90 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 169 (614)
+.++|++|.++.+....|. ..+|+.+. |.. .++.+....|.++++|+.+++..| ++......|..
T Consensus 183 ~~l~l~~n~l~~I~~~aF~-~~~L~~l~------------lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~ 247 (401)
T 4fdw_A 183 KKADLSKTKITKLPASTFV-YAGIEEVL------------LPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE 247 (401)
T ss_dssp CEEECTTSCCSEECTTTTT-TCCCSEEE------------CCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT
T ss_pred CeeecCCCcceEechhhEe-ecccCEEE------------eCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc
Confidence 9999999999866666666 57777776 764 477677778899999999999875 55455556666
Q ss_pred CCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCC-----CCccccccCcccchHHhccCccccccCCccccCCCc
Q 046036 170 FSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLS-----DEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKG 244 (614)
Q Consensus 170 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 244 (614)
.+|+.+.+ .+.++......|.++++|+.+++.+|.+. .+.+.+|.++++|+.+.|.+ .++.+...+|.++++
T Consensus 248 -~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~ 324 (401)
T 4fdw_A 248 -SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRK 324 (401)
T ss_dssp -CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCS
T ss_pred -CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCC
Confidence 78999998 45566566778888999999999887765 45667888999999999984 477677778889999
Q ss_pred cceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCC
Q 046036 245 TIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLP 284 (614)
Q Consensus 245 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 284 (614)
|+.++|..| ++.....+|.++ +|+.+++++|.+....+
T Consensus 325 L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~ 362 (401)
T 4fdw_A 325 VTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFE 362 (401)
T ss_dssp CCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCC
T ss_pred ccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccccc
Confidence 999999655 776777888888 99999999987765433
No 378
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=7.8e-17 Score=143.40 Aligned_cols=126 Identities=21% Similarity=0.205 Sum_probs=95.8
Q ss_pred cccEEEccCCccc-ccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchh
Q 046036 64 KLRILDAGGNQFA-GDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPES 142 (614)
Q Consensus 64 ~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~ 142 (614)
+|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+ |++|.+++.+|..
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~------------Ls~n~i~~~~~~~ 83 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLE------------LSDNRVSGGLEVL 83 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEE------------CCSSCCCSCTHHH
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEE------------CCCCcccchHHHH
Confidence 6778888888887 67777777888888888888888755 5677777777666 8888888767777
Q ss_pred hhccCCCCeeecccccCCCC-CCCCCCCCCCCCEEEcCCCCCccCCc---ccccCCCCCceeccC
Q 046036 143 LENLTSLQILNLSCNHLGGS-IPKPSGLFSTLSSIDFAHNNFNGSLP---LEVGSLSNTQELDFS 203 (614)
Q Consensus 143 ~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~ls 203 (614)
+..+++|++|++++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 84 ~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 84 AEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp HHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred hhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 77788888888888888753 23667778888888888888876555 467778888888775
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=3.8e-16 Score=145.28 Aligned_cols=127 Identities=22% Similarity=0.311 Sum_probs=65.3
Q ss_pred cEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhc
Q 046036 66 RILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLEN 145 (614)
Q Consensus 66 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~ 145 (614)
+.+++++|.++ .+|..+. ++|++|+|++|+++ .+|..|.++++|+.|+ |++|.|++..+..|.+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~------------Ls~N~i~~i~~~~f~~ 76 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLID------------LSNNRISTLSNQSFSN 76 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEE------------CCSSCCCCCCTTTTTT
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEE------------CCCCcCCEeCHhHccC
Confidence 34555555554 3444332 24555555555554 4444555555555444 5555555444455555
Q ss_pred cCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCC
Q 046036 146 LTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLS 208 (614)
Q Consensus 146 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 208 (614)
+++|++|+|++|+|++..|..+..+++|+.|+|++|.|+...+..|..+++|+.|+|++|.+.
T Consensus 77 l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 77 MTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 555555555555555444445555555555555555555444444555555555555555543
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=2.5e-16 Score=144.57 Aligned_cols=134 Identities=17% Similarity=0.190 Sum_probs=98.6
Q ss_pred CCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccC
Q 046036 149 LQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGG 228 (614)
Q Consensus 149 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~ 228 (614)
.+.+++++|+++ .+|..+ .++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 355666666666 344332 25677777777777755555567777777777777777766666677777788888888
Q ss_pred ccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCCC
Q 046036 229 NMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLPS 285 (614)
Q Consensus 229 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 285 (614)
|.+++..+..|..+++|++|++++|++++..+..+..+++|+.|++++|++++..|.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 888766666778888899999999999877666778889999999999998877653
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=8.2e-16 Score=141.07 Aligned_cols=129 Identities=21% Similarity=0.238 Sum_probs=64.2
Q ss_pred cEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhc
Q 046036 66 RILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLEN 145 (614)
Q Consensus 66 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~ 145 (614)
+.+++++|+++ .+|..+. ++|++|++++|++++..+..|+.+++|++|+ |++|++++..+..|..
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~------------l~~n~l~~~~~~~~~~ 74 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLS------------LSQNQIQSLPDGVFDK 74 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEE------------CCSSCCCCCCTTTTTT
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEE------------CCCCcceEeChhHccC
Confidence 34455555544 3333222 3455555555555444444444444444444 5555555444444555
Q ss_pred cCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCC
Q 046036 146 LTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSD 209 (614)
Q Consensus 146 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 209 (614)
+++|++|+|++|++++..+..+..+++|++|++++|.|++..+..+..+++|++|++++|.+++
T Consensus 75 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 75 LTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 5555555555555554444444555555555555555554433344555555555555555543
No 382
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=1.7e-14 Score=149.71 Aligned_cols=241 Identities=12% Similarity=0.103 Sum_probs=128.2
Q ss_pred CCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCE
Q 046036 12 RLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQ 91 (614)
Q Consensus 12 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 91 (614)
+|+.+.|..+ ++.+...+|.++ +|+.+.|.. .++.+.+.+ |.++. +|+.++|++|+++......|. ..+|+.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~a---F~~c~-~L~~l~l~~n~l~~I~~~aF~-~~~L~~ 207 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDI---FYYCY-NLKKADLSKTKITKLPASTFV-YAGIEE 207 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSST---TTTCT-TCCEEECTTSCCSEECTTTTT-TCCCSE
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHH---hhCcc-cCCeeecCCCcceEechhhEe-ecccCE
Confidence 4666665544 554555555553 466666654 444344444 45554 566666666666533333343 456666
Q ss_pred EeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCC
Q 046036 92 LGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFS 171 (614)
Q Consensus 92 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 171 (614)
+.|..+ ++.+....|.++++|+.++ +..| ++.+...+|.+ .+|+.+.+ .|.++...+..|..++
T Consensus 208 l~lp~~-l~~I~~~aF~~~~~L~~l~------------l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~ 271 (401)
T 4fdw_A 208 VLLPVT-LKEIGSQAFLKTSQLKTIE------------IPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCP 271 (401)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCCEE------------CCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCT
T ss_pred EEeCCc-hheehhhHhhCCCCCCEEe------------cCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCC
Confidence 666533 5545555566666666555 4442 34344445555 55666666 3334434455555666
Q ss_pred CCCEEEcCCCCCc-----cCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccc
Q 046036 172 TLSSIDFAHNNFN-----GSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTI 246 (614)
Q Consensus 172 ~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 246 (614)
+|+.+++.+|.+. ...+..|.++++|+.++|. +.++.+...+|.++.+|+.+.|..| ++.+-..+|.++ +|+
T Consensus 272 ~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~ 348 (401)
T 4fdw_A 272 ELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIK 348 (401)
T ss_dssp TCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCC
T ss_pred CCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCC
Confidence 6666666555543 2334455566666666665 3355455555666666666666443 443445556665 666
Q ss_pred eEEccCCcCcccCCcccCCCC-CCCEEECcCCcC
Q 046036 247 DLNLSHNNLSGTIPKELETLP-FLENLNLSFNNF 279 (614)
Q Consensus 247 ~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~N~l 279 (614)
.+++++|.+....+..|..++ +++.|++..+.+
T Consensus 349 ~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 349 EVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp EEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 666666655554455555553 455555554443
No 383
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=1e-15 Score=140.22 Aligned_cols=133 Identities=18% Similarity=0.163 Sum_probs=74.5
Q ss_pred CCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCC
Q 046036 31 LSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKL 110 (614)
Q Consensus 31 ~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 110 (614)
+.++++|++|++++|+++. +|. +..+.++|++|+|++|.+++. ..+..+++|++|+|++|.+++..+..|..+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~----~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l 87 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN----LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQAL 87 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC----GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHC
T ss_pred cCCcCCceEEEeeCCCCch-hHH----hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcC
Confidence 4455566666666666652 232 222222566666666666543 455566666666666666664433444556
Q ss_pred CCCCcccccccccccceEecCCCccccccch--hhhccCCCCeeecccccCCCCCCCC----CCCCCCCCEEEcCCCCCc
Q 046036 111 QNLQKLNPLATSLYSFQLNLAENNLTGNIPE--SLENLTSLQILNLSCNHLGGSIPKP----SGLFSTLSSIDFAHNNFN 184 (614)
Q Consensus 111 ~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 184 (614)
++|++|+ |++|+|+ .+|. .+..+++|++|++++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 88 ~~L~~L~------------L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 88 PDLTELI------------LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TTCCEEE------------CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCEEE------------CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666555 6666664 3333 5666666666666666665 34442 556666666666666554
No 384
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.59 E-value=4.4e-16 Score=154.57 Aligned_cols=148 Identities=11% Similarity=0.031 Sum_probs=98.3
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccccc
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFGLA 453 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfGla 453 (614)
.++..++||||+++|+|.+++... ....+..+|+.++ |+|||++.++.+||+++|..
T Consensus 102 ~~~~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~ 176 (286)
T 3uqc_A 102 TRAGGLVVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATM 176 (286)
T ss_dssp ETTEEEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCC
T ss_pred ECCcEEEEEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecccc
Confidence 356789999999999999999642 2333456666665 99999999999999855432
Q ss_pred cccCCCCCCCCCCCcCcccccccccccccccCCCCccCceeehhHHHHHHHhCCCCCCcccccCch--HHHHHHhhCCCC
Q 046036 454 RFLPTNVTNPMKGQSNSAAVWGSIGYNMEWVARYQHKGKGYSCGILLLEIMTGKRPTDEMFADCLS--LHNFCEMALPES 531 (614)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aE~~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~~~--l~~~~~~~~~~~ 531 (614)
..++.++|||||||++|||+||+.||......... .........+
T Consensus 177 -------------------------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~-- 223 (286)
T 3uqc_A 177 -------------------------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPI-- 223 (286)
T ss_dssp -------------------------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBC--
T ss_pred -------------------------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCC--
Confidence 13578899999999999999999999864332110 0000000000
Q ss_pred hHHHHHHHHhcCcCCCCCCchhhHHHHHHHHHHHHHHhhccCCCCccCCCCHHHHHHHHHHhHHHhhc
Q 046036 532 VMELVYSRLLQGVDKDAEDEPCMKAKIRECLTSLGRIGIASLTETPNERMGVREMVMEMNVIKEVLLG 599 (614)
Q Consensus 532 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~C~~~~p~~RPsm~ev~~~L~~i~~~~~~ 599 (614)
... .+.. +....+.++..+|++.||++| |+.|+++.|+++......
T Consensus 224 ~~~----~~~~-----------------~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~ 269 (286)
T 3uqc_A 224 EPA----DIDR-----------------DIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADR 269 (286)
T ss_dssp CHH----HHCT-----------------TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC----
T ss_pred Chh----hccc-----------------CCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCc
Confidence 000 0000 111234467779999999999 999999999988765443
No 385
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.59 E-value=1.7e-15 Score=138.86 Aligned_cols=132 Identities=19% Similarity=0.189 Sum_probs=105.1
Q ss_pred hccccccccEEEccCCcccccCCCCCcCCC-CCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccc
Q 046036 58 FTNLSTKLRILDAGGNQFAGDIPAGIPKYF-NLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLT 136 (614)
Q Consensus 58 ~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~ 136 (614)
+.+.. +|++|++++|+++ .+|. +..+. +|++|+|++|.+++. ..|+.+++|++|+ |++|+|+
T Consensus 15 ~~~~~-~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~------------Ls~N~l~ 77 (176)
T 1a9n_A 15 YTNAV-RDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLL------------VNNNRIC 77 (176)
T ss_dssp EECTT-SCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEE------------CCSSCCC
T ss_pred cCCcC-CceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEE------------CCCCccc
Confidence 45555 8999999999998 4554 55554 999999999999865 5788888888777 9999999
Q ss_pred cccchhhhccCCCCeeecccccCCCCCCC--CCCCCCCCCEEEcCCCCCccCCccc----ccCCCCCceeccCCccCC
Q 046036 137 GNIPESLENLTSLQILNLSCNHLGGSIPK--PSGLFSTLSSIDFAHNNFNGSLPLE----VGSLSNTQELDFSEHMLS 208 (614)
Q Consensus 137 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~ls~N~l~ 208 (614)
+..+..|..+++|++|+|++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.||++.|.+.
T Consensus 78 ~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 78 RIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 766666789999999999999986 5555 6778888999999999887 45553 778888888888888764
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=7.1e-18 Score=157.93 Aligned_cols=152 Identities=22% Similarity=0.284 Sum_probs=81.9
Q ss_pred CCCcEEecccccCcccCCc------ChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCcccc
Q 046036 35 SKLTYLSLFSNNLHGIIPP------SLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIG 108 (614)
Q Consensus 35 ~~L~~L~L~~N~l~~~~p~------~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 108 (614)
..++.++++.|.+++.+|. . +..++ +|++|+|++|.+++ +| .+..+++|++|+|++|.++ .+|..+.
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~---~~~l~-~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDAT---LSTLK-ACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHH---HHHTT-TCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHH---HhcCC-CCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 3444444444444444433 3 33444 55555555555543 34 4555555555555555554 3444444
Q ss_pred CCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCC-CCCCCCCCCCEEEcCCCCCccCC
Q 046036 109 KLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIP-KPSGLFSTLSSIDFAHNNFNGSL 187 (614)
Q Consensus 109 ~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~ 187 (614)
.+++|++|+ |++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++.+
T Consensus 91 ~~~~L~~L~------------L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 91 VADTLEELW------------ISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp HHHHCSEEE------------EEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred cCCcCCEEE------------CcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 445555444 55555553 23 46666666666666666653221 24556666667777777666554
Q ss_pred cc----------cccCCCCCceeccCCccCCC
Q 046036 188 PL----------EVGSLSNTQELDFSEHMLSD 209 (614)
Q Consensus 188 ~~----------~~~~l~~L~~L~ls~N~l~~ 209 (614)
|. .+..+++|+.|| +|.++.
T Consensus 157 ~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 157 KENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred ccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 43 267778888776 666653
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=1.3e-17 Score=156.06 Aligned_cols=139 Identities=19% Similarity=0.226 Sum_probs=80.9
Q ss_pred cCCCccccccch------hhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccC
Q 046036 130 LAENNLTGNIPE------SLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFS 203 (614)
Q Consensus 130 L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls 203 (614)
++.|.+++..|. .|..+++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+..+++|+.|+++
T Consensus 25 l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~ 101 (198)
T 1ds9_A 25 AEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWIS 101 (198)
T ss_dssp CSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEE
T ss_pred hheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECc
Confidence 444444444443 66667777777777777664 45 5566666666666666666 455555555666666666
Q ss_pred CccCCCCccccccCcccchHHhccCccccccCC-ccccCCCccceEEccCCcCcccCCcc----------cCCCCCCCEE
Q 046036 204 EHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIP-PFFGSFKGTIDLNLSHNNLSGTIPKE----------LETLPFLENL 272 (614)
Q Consensus 204 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~----------~~~l~~L~~L 272 (614)
+|.+++. | .+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+++..|.. +..+++|+.|
T Consensus 102 ~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~L 179 (198)
T 1ds9_A 102 YNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKL 179 (198)
T ss_dssp EEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEE
T ss_pred CCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEE
Confidence 6666642 2 45555666666666666653221 34555666666666666665444331 4455556655
Q ss_pred E
Q 046036 273 N 273 (614)
Q Consensus 273 ~ 273 (614)
|
T Consensus 180 d 180 (198)
T 1ds9_A 180 D 180 (198)
T ss_dssp C
T ss_pred C
Confidence 4
No 388
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=6.7e-14 Score=127.20 Aligned_cols=106 Identities=26% Similarity=0.314 Sum_probs=67.4
Q ss_pred ccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhh
Q 046036 65 LRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLE 144 (614)
Q Consensus 65 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~ 144 (614)
.+.|++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+ |++|+|++..+..|.
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~------------Ls~N~l~~l~~~~f~ 75 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLD------------LDNNQLTVLPAGVFD 75 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEE------------CCSSCCCCCCTTTTT
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEE------------CCCCCcCccChhhcc
Confidence 456677777766 4555443 5666677777766666666666666666555 666666655555566
Q ss_pred ccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCcc
Q 046036 145 NLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNG 185 (614)
Q Consensus 145 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 185 (614)
.+++|++|+|++|+|++..+..+..+++|++|+|++|.++.
T Consensus 76 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 76 KLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 66666666676666665555556666666666666666653
No 389
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=4e-14 Score=128.66 Aligned_cols=90 Identities=18% Similarity=0.201 Sum_probs=58.0
Q ss_pred CCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEEC
Q 046036 195 SNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNL 274 (614)
Q Consensus 195 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 274 (614)
++|+.|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 44445555555555444555555555555555555555555555667777777777777777666666777788888888
Q ss_pred cCCcCcccCC
Q 046036 275 SFNNFEGQLP 284 (614)
Q Consensus 275 s~N~l~~~~p 284 (614)
++|++++..+
T Consensus 110 ~~N~~~c~c~ 119 (170)
T 3g39_A 110 LNNPWDCACS 119 (170)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCCCCCch
Confidence 8887776654
No 390
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=1.5e-13 Score=125.38 Aligned_cols=104 Identities=28% Similarity=0.367 Sum_probs=59.6
Q ss_pred cEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhhc
Q 046036 66 RILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLEN 145 (614)
Q Consensus 66 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~ 145 (614)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+ |++|+|++..+..|..
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~------------Ls~N~l~~i~~~~~~~ 79 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLY------------FNSNKLTAIPTGVFDK 79 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEE------------CCSSCCCCCCTTTTTT
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEE------------CCCCCCCccChhHhCC
Confidence 45666666664 4555443 4666666666666655555555555555555 6666665544444556
Q ss_pred cCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCc
Q 046036 146 LTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFN 184 (614)
Q Consensus 146 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 184 (614)
+++|++|+|++|+|++..+..+..+++|+.|+|++|.+.
T Consensus 80 l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 80 LTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666666666666666444444555666666666666555
No 391
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=9.1e-14 Score=126.75 Aligned_cols=90 Identities=16% Similarity=0.239 Sum_probs=53.9
Q ss_pred CCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEEC
Q 046036 195 SNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNL 274 (614)
Q Consensus 195 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 274 (614)
++|+.|+|++|.|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34444444444444444444445555555555555555444445566777777777777777655556777777777777
Q ss_pred cCCcCcccCC
Q 046036 275 SFNNFEGQLP 284 (614)
Q Consensus 275 s~N~l~~~~p 284 (614)
++|++.+..+
T Consensus 113 ~~N~~~c~~~ 122 (174)
T 2r9u_A 113 YNNPWDCECR 122 (174)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCcccccc
Confidence 7777776544
No 392
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.46 E-value=3e-14 Score=144.91 Aligned_cols=104 Identities=16% Similarity=0.004 Sum_probs=84.0
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC-------------------CCceeeCCCC---------
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI-------------------PSNVLLDYDM--------- 443 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i-------------------~~NILld~~~--------- 443 (614)
.++..++|||||++|++.+.+.. ..+++.....|+.++ |+|||++.++
T Consensus 133 ~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~ 208 (336)
T 2vuw_A 133 KDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLN 208 (336)
T ss_dssp CTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEET
T ss_pred ccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeecc
Confidence 35678999999999987777753 247787777776666 9999999887
Q ss_pred -----------CeeecccccccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHH-HHHHHhCCCC
Q 046036 444 -----------TAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGIL-LLEIMTGKRP 509 (614)
Q Consensus 444 -----------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvv-llElltG~~p 509 (614)
.+||+|||+|+..... ..+||+.|+| |. .+..+.++||||+|++ ..++++|..|
T Consensus 209 ~~~~~~~~~~~~vkL~DFG~a~~~~~~------------~~~gt~~y~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p 276 (336)
T 2vuw_A 209 GKSSTIPSCGLQVSIIDYTLSRLERDG------------IVVFCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHP 276 (336)
T ss_dssp TEEEEEECTTEEEEECCCTTCBEEETT------------EEECCCCTTCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCT
T ss_pred CccccccCCCceEEEeeccccEecCCC------------cEEEeecccChhhhcCCCccceehhhhhCCCCcccccccCC
Confidence 8999999999876532 3589999977 87 4555899999998777 7778899999
Q ss_pred CC
Q 046036 510 TD 511 (614)
Q Consensus 510 ~~ 511 (614)
|.
T Consensus 277 ~~ 278 (336)
T 2vuw_A 277 YS 278 (336)
T ss_dssp HH
T ss_pred Cc
Confidence 85
No 393
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.43 E-value=1.5e-14 Score=157.06 Aligned_cols=107 Identities=21% Similarity=0.161 Sum_probs=69.0
Q ss_pred CCCCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC------------------CCceeeCCCCCeeecccc
Q 046036 390 SGGNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI------------------PSNVLLDYDMTAYVGDFG 451 (614)
Q Consensus 390 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i------------------~~NILld~~~~~kl~DfG 451 (614)
+..++..||||||++||+|.++|...+ +++..+ |+.+| |+|||+++++.+||+|||
T Consensus 311 ~ed~~~~yLVMEyv~G~~L~d~i~~~~---~l~~~~---I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFG 384 (569)
T 4azs_A 311 GENAQSGWLVMEKLPGRLLSDMLAAGE---EIDREK---ILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFG 384 (569)
T ss_dssp EECSSEEEEEEECCCSEEHHHHHHTTC---CCCHHH---HHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCT
T ss_pred EEECCEEEEEEecCCCCcHHHHHHhCC---CCCHHH---HHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecc
Confidence 345678999999999999999998643 455542 44454 999999999999999999
Q ss_pred cccccCCCCCCCCCCCcCcccccccccccc-cc-cCCCCccCceeehhHHHHHHHhCCCC
Q 046036 452 LARFLPTNVTNPMKGQSNSAAVWGSIGYNM-EW-VARYQHKGKGYSCGILLLEIMTGKRP 509 (614)
Q Consensus 452 la~~~~~~~~~~~~~~~~~~~~~gt~~y~a-E~-~~~~~~k~DVySfGvvllElltG~~p 509 (614)
+|+...... ......+||++||| |. .+.+..++|+||.|++++++.++..|
T Consensus 385 lAr~~~~~~-------~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 385 SIVTTPQDC-------SWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp TEESCC----------CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHH
T ss_pred cCeeCCCCC-------ccccCceechhhccHHHhCCCCCCcccccccccchhhhccccch
Confidence 999776543 23456889999977 87 67788899999999998888776554
No 394
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.40 E-value=3.1e-15 Score=153.74 Aligned_cols=169 Identities=20% Similarity=0.180 Sum_probs=80.5
Q ss_pred CCCcEEecccccCcccCCcChhhh-ccccccccEEEccCCcccccCCCCC-cCCCCCCEEeccCCcCcccCCcccc----
Q 046036 35 SKLTYLSLFSNNLHGIIPPSLDSF-TNLSTKLRILDAGGNQFAGDIPAGI-PKYFNLIQLGLDRNCLAGSIPFSIG---- 108 (614)
Q Consensus 35 ~~L~~L~L~~N~l~~~~p~~~~~~-~~l~~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~---- 108 (614)
++|++|+|++|.++......+... .....+|++|+|++|.++......+ ..+.+|++|+|++|.++......+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 345555555555553322221111 1010155555555555543222222 1234555666666655433322221
Q ss_pred -CCCCCCcccccccccccceEecCCCccccc----cchhhhccCCCCeeecccccCCCC----CCCCCCCCCCCCEEEcC
Q 046036 109 -KLQNLQKLNPLATSLYSFQLNLAENNLTGN----IPESLENLTSLQILNLSCNHLGGS----IPKPSGLFSTLSSIDFA 179 (614)
Q Consensus 109 -~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls 179 (614)
..++|++|+ |++|.|+.. ++..+..+++|++|+|++|.|++. ++..+...++|++|+|+
T Consensus 152 ~~~~~L~~L~------------Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls 219 (372)
T 3un9_A 152 HDQCQITTLR------------LSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVA 219 (372)
T ss_dssp STTCCCCEEE------------CCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECC
T ss_pred hcCCccceee------------CCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECC
Confidence 233444444 666665432 233345566666666666666521 12334445566666666
Q ss_pred CCCCccC----CcccccCCCCCceeccCCccCCCCccccc
Q 046036 180 HNNFNGS----LPLEVGSLSNTQELDFSEHMLSDEIPITL 215 (614)
Q Consensus 180 ~N~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 215 (614)
+|.|+.. ++..+...++|++|+|++|.|+......+
T Consensus 220 ~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 220 YNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp SSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 6666532 22333445667777777777665433333
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.35 E-value=2e-11 Score=126.85 Aligned_cols=277 Identities=10% Similarity=0.006 Sum_probs=161.7
Q ss_pred cccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCC------------
Q 046036 6 EIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGN------------ 73 (614)
Q Consensus 6 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N------------ 73 (614)
+|.++.+|+.+.|.. .++.+...+|.++++|+.++|.++ ++.+.... |.++. +|+.+.+..+
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~a---F~~c~-~L~~i~~p~~l~~i~~~aF~~~ 139 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCT---FSGCY-ALKSILLPLMLKSIGVEAFKGC 139 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTT---TTTCT-TCCCCCCCTTCCEECTTTTTTC
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchh---hcccc-cchhhcccCceeeecceeeecc
Confidence 467788999999974 477777888999999999999765 55444444 44443 4444443322
Q ss_pred ---------cccccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc------------ccceEecCC
Q 046036 74 ---------QFAGDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL------------YSFQLNLAE 132 (614)
Q Consensus 74 ---------~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~------------~l~~L~L~~ 132 (614)
.+......+|.++.+|+.+.+.++. .......|.++.+|+.+++ |..+ .++.+.+..
T Consensus 140 ~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l-~~~~~~I~~~~F~~~~~L~~i~~~~ 217 (394)
T 4fs7_A 140 DFKEITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKL-PRNLKIIRDYCFAECILLENMEFPN 217 (394)
T ss_dssp CCSEEECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCC-CTTCCEECTTTTTTCTTCCBCCCCT
T ss_pred cccccccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEc-CCCceEeCchhhccccccceeecCC
Confidence 1111233567788888888887654 4366677888888888873 1111 222333332
Q ss_pred CccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCcc
Q 046036 133 NNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIP 212 (614)
Q Consensus 133 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~ 212 (614)
+... +...+....+|+.+.+..+ ++......+.....|+.+.+..+... .....|..+..++.+.+..+.+. .
T Consensus 218 ~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~ 290 (394)
T 4fs7_A 218 SLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---E 290 (394)
T ss_dssp TCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---T
T ss_pred CceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---c
Confidence 2211 1222223344555544322 22233445666777787777766543 44556666777776666555432 3
Q ss_pred ccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcCCcCcccCC-CccccCC
Q 046036 213 ITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSFNNFEGQLP-SMSVFTN 291 (614)
Q Consensus 213 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~~~ 291 (614)
..|..+.+|+.+.+..+ ++.+-..+|.++.+|+.++|.++ ++.....+|.++.+|+.+++..| ++..-. .+....+
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 45666667777766554 44445556777777777777543 55455666777777777777655 332211 2333455
Q ss_pred CceEEEecC
Q 046036 292 TSVISIVGN 300 (614)
Q Consensus 292 l~~~~~~~N 300 (614)
++.+.+..+
T Consensus 368 L~~i~lp~~ 376 (394)
T 4fs7_A 368 LKKVELPKR 376 (394)
T ss_dssp CCEEEEEGG
T ss_pred CCEEEECCC
Confidence 666666544
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=8.3e-15 Score=150.54 Aligned_cols=79 Identities=18% Similarity=0.157 Sum_probs=36.5
Q ss_pred cCCCccccccchhh-hccCCCCeeecccccCCCCCCCCC-----CCCCCCCEEEcCCCCCccC----CcccccCCCCCce
Q 046036 130 LAENNLTGNIPESL-ENLTSLQILNLSCNHLGGSIPKPS-----GLFSTLSSIDFAHNNFNGS----LPLEVGSLSNTQE 199 (614)
Q Consensus 130 L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~ 199 (614)
|++|.|+......+ ..+++|++|+|++|.|+......+ ...++|++|+|++|.|+.. ++..+..+++|++
T Consensus 108 Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~ 187 (372)
T 3un9_A 108 LASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTH 187 (372)
T ss_dssp CTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCE
T ss_pred ecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCE
Confidence 55555543222222 234455555555555542211111 1234566666666665431 2223345556666
Q ss_pred eccCCccCC
Q 046036 200 LDFSEHMLS 208 (614)
Q Consensus 200 L~ls~N~l~ 208 (614)
|+|++|.++
T Consensus 188 L~Ls~N~l~ 196 (372)
T 3un9_A 188 LSLLHTGLG 196 (372)
T ss_dssp EECTTSSCH
T ss_pred EeCCCCCCC
Confidence 666666554
No 397
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=3.8e-12 Score=129.97 Aligned_cols=104 Identities=21% Similarity=0.201 Sum_probs=84.2
Q ss_pred EEEccCC-cccccCCCCCcCCCCCCEEeccC-CcCcccCCccccCCCCCCcccccccccccceEecCCCccccccchhhh
Q 046036 67 ILDAGGN-QFAGDIPAGIPKYFNLIQLGLDR-NCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLE 144 (614)
Q Consensus 67 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~ 144 (614)
.++++++ +|+ .+|. +..+++|++|+|++ |.|++..+..|++|++|+.|+ |++|+|++..|..|.
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~------------l~~N~l~~~~~~~~~ 77 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLT------------IVKSGLRFVAPDAFH 77 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEE------------CCSSCCCEECTTGGG
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEE------------CCCCccceeCHHHhc
Confidence 4688887 787 5777 88888888899986 888877778888888888877 888888888888888
Q ss_pred ccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCcc
Q 046036 145 NLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNG 185 (614)
Q Consensus 145 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 185 (614)
+|++|++|+|++|+|++..+..+..++ |+.|+|.+|.|..
T Consensus 78 ~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 78 FTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 888999999999988865555555555 8888888888874
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=5e-12 Score=129.08 Aligned_cols=106 Identities=22% Similarity=0.184 Sum_probs=87.4
Q ss_pred CeeeecCC-cccccCCcCCCCCCCCcEEeccc-ccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCE
Q 046036 14 QNLNFGNS-TVQGEIPSHLSPTSKLTYLSLFS-NNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQ 91 (614)
Q Consensus 14 ~~L~L~~n-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 91 (614)
..++++++ +|+ .+|. |..+++|++|+|++ |+|++..|.. |.+++ +|++|+|++|+|++..|..|.++++|++
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~---~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 84 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRD---LRGLG-ELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGG---SCSCC-CCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhH---hcccc-CCCEEECCCCccceeCHHHhcCCcCCCE
Confidence 45788887 888 5777 99999999999996 9999777777 77787 8999999999999888888999999999
Q ss_pred EeccCCcCcccCCccccCCCCCCcccccccccccceEecCCCccccc
Q 046036 92 LGLDRNCLAGSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGN 138 (614)
Q Consensus 92 L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~ 138 (614)
|+|++|+|++..+..|..+. |+.|+ |.+|.+...
T Consensus 85 L~l~~N~l~~~~~~~~~~~~-L~~l~------------l~~N~~~c~ 118 (347)
T 2ifg_A 85 LNLSFNALESLSWKTVQGLS-LQELV------------LSGNPLHCS 118 (347)
T ss_dssp EECCSSCCSCCCSTTTCSCC-CCEEE------------CCSSCCCCC
T ss_pred EeCCCCccceeCHHHcccCC-ceEEE------------eeCCCccCC
Confidence 99999999876666666655 77666 888888743
No 399
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.22 E-value=3.6e-10 Score=117.37 Aligned_cols=260 Identities=9% Similarity=0.043 Sum_probs=141.8
Q ss_pred cccCCC-CCCeeeecCCcccccCCcCCCCCCCCcEEeccccc---CcccCCcChhhhccccccccEEEccCCcccccCCC
Q 046036 6 EIGNLF-RLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNN---LHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPA 81 (614)
Q Consensus 6 ~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~ 81 (614)
.|.+.. .|+.+.|..+ ++.+-..+|.++++|+.+.+..|. ++.+...+ |.++. +|+.+.+..+ ++.....
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~a---F~~c~-~L~~i~~~~~-~~~I~~~ 131 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQA---FMFCS-ELTDIPILDS-VTEIDSE 131 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTT---TTTCT-TCCBCGGGTT-CSEECTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhh---chhcc-cceeeccCCc-cceehhh
Confidence 355554 5899999754 777888899999999999998774 55444555 66665 7777777654 5545566
Q ss_pred CCcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc-----------ccceEecCCCccccccchhhhccCCCC
Q 046036 82 GIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL-----------YSFQLNLAENNLTGNIPESLENLTSLQ 150 (614)
Q Consensus 82 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~-----------~l~~L~L~~N~l~~~~~~~~~~l~~L~ 150 (614)
.|..+.+|+.+.+..+ +.......|..+.+|+.+.+ +..+ .++.+.+..+-.. .....|..+.+|+
T Consensus 132 aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~-~~~~~~I~~~aF~~~~l~~i~ip~~~~~-i~~~af~~c~~l~ 208 (394)
T 4gt6_A 132 AFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTL-PDSVTAIEERAFTGTALTQIHIPAKVTR-IGTNAFSECFALS 208 (394)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEC-CTTCCEECTTTTTTCCCSEEEECTTCCE-ECTTTTTTCTTCC
T ss_pred hhhhhcccccccccce-eeeecccceecccccccccc-cceeeEeccccccccceeEEEECCcccc-cccchhhhccccc
Confidence 7888888888888654 44466667777888877763 1111 3334444333221 3334455555555
Q ss_pred eeecccccCC------------------------------------CCCCCCCCCCCCCCEEEcCCCCCccCCcccccCC
Q 046036 151 ILNLSCNHLG------------------------------------GSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSL 194 (614)
Q Consensus 151 ~L~L~~N~l~------------------------------------~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 194 (614)
......+... ..-...|..+..|+.+.+..+..+ .....|.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c 287 (394)
T 4gt6_A 209 TITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNC 287 (394)
T ss_dssp EEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTC
T ss_pred eecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCcccccc
Confidence 5544332221 011123344444555555443322 333344455
Q ss_pred CCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEEC
Q 046036 195 SNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNL 274 (614)
Q Consensus 195 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 274 (614)
.+|+.+.+. +.++.+...+|.++.+|+.+.|..+ ++.+-..+|.++.+|+.+.+..+ ++.....+|.++++|+.+++
T Consensus 288 ~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~ 364 (394)
T 4gt6_A 288 PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEY 364 (394)
T ss_dssp TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEE
T ss_pred cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEE
Confidence 555555553 2333333445555555555555433 33333444555555555555432 43333445555555555555
Q ss_pred cCCc
Q 046036 275 SFNN 278 (614)
Q Consensus 275 s~N~ 278 (614)
.+|.
T Consensus 365 ~~~~ 368 (394)
T 4gt6_A 365 SGSR 368 (394)
T ss_dssp SSCH
T ss_pred CCce
Confidence 5443
No 400
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.16 E-value=3.1e-10 Score=117.82 Aligned_cols=226 Identities=11% Similarity=-0.003 Sum_probs=149.1
Q ss_pred cccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCCCCCCEEeccCCcCcccC
Q 046036 24 QGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCLAGSI 103 (614)
Q Consensus 24 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 103 (614)
......+|.++++|+.+.+.++. ..+.... |.++. +|+.+++..| ++......|.++..|+.+.+..+... +
T Consensus 151 ~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~---F~~c~-~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i 222 (394)
T 4fs7_A 151 TVIGDEAFATCESLEYVSLPDSM-ETLHNGL---FSGCG-KLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--L 222 (394)
T ss_dssp CEECTTTTTTCTTCCEEECCTTC-CEECTTT---TTTCT-TCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--E
T ss_pred cccchhhhcccCCCcEEecCCcc-ceecccc---ccCCC-CceEEEcCCC-ceEeCchhhccccccceeecCCCceE--e
Confidence 33456678888889999887654 3244445 66666 7888888776 55455667888888888888766543 2
Q ss_pred CccccCCCCCCcccccccccccceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCC
Q 046036 104 PFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNF 183 (614)
Q Consensus 104 p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 183 (614)
...+....+|+.+. +..+ ++......|..+.+|+.+.+..+... .....+.....++.+.+..+.+
T Consensus 223 ~~~~~~~~~l~~i~------------ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i 288 (394)
T 4fs7_A 223 GDFALSKTGVKNII------------IPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV 288 (394)
T ss_dssp CTTTTTTCCCCEEE------------ECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE
T ss_pred ehhhcccCCCceEE------------ECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee
Confidence 23333445666554 4322 23344456777777777777766543 4556667777777777766543
Q ss_pred ccCCcccccCCCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCccc
Q 046036 184 NGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKEL 263 (614)
Q Consensus 184 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 263 (614)
. ...|..+.+|+.+.+..+ ++.+...+|.++.+|+.++|..+ ++.+-..+|.++.+|+.+++..| ++.....+|
T Consensus 289 ~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF 362 (394)
T 4fs7_A 289 P---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAF 362 (394)
T ss_dssp C---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTB
T ss_pred c---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHh
Confidence 2 235667777777777654 55555667777778887777644 55455667777888888888766 665666778
Q ss_pred CCCCCCCEEECcCC
Q 046036 264 ETLPFLENLNLSFN 277 (614)
Q Consensus 264 ~~l~~L~~L~ls~N 277 (614)
.++++|+.+++..+
T Consensus 363 ~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 363 QGCINLKKVELPKR 376 (394)
T ss_dssp TTCTTCCEEEEEGG
T ss_pred hCCCCCCEEEECCC
Confidence 88888888877654
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.14 E-value=1e-09 Score=113.88 Aligned_cols=257 Identities=10% Similarity=0.099 Sum_probs=173.6
Q ss_pred cccCCCCCCeeeecCCc---ccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCC
Q 046036 6 EIGNLFRLQNLNFGNST---VQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAG 82 (614)
Q Consensus 6 ~~~~l~~L~~L~L~~n~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~ 82 (614)
+|.++++|+.+.+..|. ++.+-..+|..+.+|+.+.+..+ ++.+.... |.++. +|+.+.+..+ +.......
T Consensus 82 AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~a---F~~c~-~L~~i~lp~~-~~~I~~~~ 155 (394)
T 4gt6_A 82 AFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEA---FHHCE-ELDTVTIPEG-VTSVADGM 155 (394)
T ss_dssp TTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTT---TTTCT-TCCEEECCTT-CCEECTTT
T ss_pred HhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhh---hhhhc-ccccccccce-eeeecccc
Confidence 57788999999998764 77677788999999998888765 55344445 56665 7888888654 33355566
Q ss_pred CcCCCCCCEEeccCCcCcccCCccccCCCCCCccccccccc------------cc-------------------------
Q 046036 83 IPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL------------YS------------------------- 125 (614)
Q Consensus 83 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~------------~l------------------------- 125 (614)
|..+.+|+.+.+..+ ++.+....|.. .+|+.+.+ |..+ .+
T Consensus 156 F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~i-p~~~~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (394)
T 4gt6_A 156 FSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHI-PAKVTRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGD 232 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEE-CTTCCEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSC
T ss_pred eecccccccccccce-eeEeccccccc-cceeEEEE-CCcccccccchhhhccccceecccccccccccceeeccccccc
Confidence 777777887777654 33333344432 33444432 1000 01
Q ss_pred ------------ceEecCCCccccccchhhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccC
Q 046036 126 ------------FQLNLAENNLTGNIPESLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGS 193 (614)
Q Consensus 126 ------------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 193 (614)
..+.+. +.++......|.++.+|+.+.+..+... .....+.++++|+.+.+. +.++......|.+
T Consensus 233 ~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~ 309 (394)
T 4gt6_A 233 YALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAG 309 (394)
T ss_dssp EEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTT
T ss_pred ccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecC
Confidence 111111 2233334567889999999999876544 566778899999999997 4566566678999
Q ss_pred CCCCceeccCCccCCCCccccccCcccchHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEE
Q 046036 194 LSNTQELDFSEHMLSDEIPITLGNRSKFEHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLN 273 (614)
Q Consensus 194 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 273 (614)
+.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++.+-..+|.++++|+.+++.++.... ..+.....|+.+.
T Consensus 310 c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~ 384 (394)
T 4gt6_A 310 CISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLP 384 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----
T ss_pred CCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEE
Confidence 999999999865 66677789999999999999765 665667789999999999999986542 4567788899888
Q ss_pred CcCCcC
Q 046036 274 LSFNNF 279 (614)
Q Consensus 274 ls~N~l 279 (614)
+..|.+
T Consensus 385 i~~~~~ 390 (394)
T 4gt6_A 385 VAPGSI 390 (394)
T ss_dssp ------
T ss_pred eCCCCE
Confidence 877654
No 402
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.92 E-value=6.6e-11 Score=120.42 Aligned_cols=185 Identities=17% Similarity=0.169 Sum_probs=104.4
Q ss_pred cCCCCCCCCcEEecccccCcc-----cCCcChhh-hccccccccEEEccCCc-ccccCCCCCcCCCCCCEEeccCCcCcc
Q 046036 29 SHLSPTSKLTYLSLFSNNLHG-----IIPPSLDS-FTNLSTKLRILDAGGNQ-FAGDIPAGIPKYFNLIQLGLDRNCLAG 101 (614)
Q Consensus 29 ~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~-~~~l~~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~ 101 (614)
.+...+++|+.|.+..+.... .-...+.. +..++ +|+.|+|++|. + .++. +. +++|++|+|..|.++.
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P-~L~~L~L~g~~~l--~l~~-~~-~~~L~~L~L~~~~l~~ 207 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMP-LLNNLKIKGTNNL--SIGK-KP-RPNLKSLEIISGGLPD 207 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCT-TCCEEEEECCBTC--BCCS-CB-CTTCSEEEEECSBCCH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCC-CCcEEEEeCCCCc--eecc-cc-CCCCcEEEEecCCCCh
Confidence 345556677777775543210 00011111 34455 78888887773 2 2333 33 6788888888777764
Q ss_pred cCCcccc--CCCCCCcccccccccccceEecCCCccccc-----cchhh--hccCCCCeeecccccCCCCCCCCC---CC
Q 046036 102 SIPFSIG--KLQNLQKLNPLATSLYSFQLNLAENNLTGN-----IPESL--ENLTSLQILNLSCNHLGGSIPKPS---GL 169 (614)
Q Consensus 102 ~~p~~~~--~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~-----~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~---~~ 169 (614)
.....+. .+++|+.|+ |.+..|...+. +...+ ..+++|++|+|++|.+.+..+..+ ..
T Consensus 208 ~~l~~l~~~~lp~L~~L~----------L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~ 277 (362)
T 2ra8_A 208 SVVEDILGSDLPNLEKLV----------LYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDI 277 (362)
T ss_dssp HHHHHHHHSBCTTCCEEE----------EECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSS
T ss_pred HHHHHHHHccCCCCcEEE----------EeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCcc
Confidence 4333343 577777776 11112221111 11122 246888888888888763222111 24
Q ss_pred CCCCCEEEcCCCCCccC----CcccccCCCCCceeccCCccCCCCccccccC-cccchHHhccCcc
Q 046036 170 FSTLSSIDFAHNNFNGS----LPLEVGSLSNTQELDFSEHMLSDEIPITLGN-RSKFEHLLLGGNM 230 (614)
Q Consensus 170 l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-l~~L~~L~L~~N~ 230 (614)
+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.++...-..+.. + ...++++.++
T Consensus 278 ~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp GGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 67899999999888753 2333456788999999998887543333322 1 2346777765
No 403
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.92 E-value=2e-10 Score=116.93 Aligned_cols=159 Identities=17% Similarity=0.139 Sum_probs=86.9
Q ss_pred CCCcEEecccccCcc-cCCcC----hhhhccccccccEEEccCCccc---------ccCCCCCcCCCCCCEEeccCCcCc
Q 046036 35 SKLTYLSLFSNNLHG-IIPPS----LDSFTNLSTKLRILDAGGNQFA---------GDIPAGIPKYFNLIQLGLDRNCLA 100 (614)
Q Consensus 35 ~~L~~L~L~~N~l~~-~~p~~----~~~~~~l~~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~ 100 (614)
..++.|.+......+ ..... ..+...++ +|+.|.+.++... +.++..+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~-~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFA-HFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHT-TCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcc-hhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 346677776554432 11001 11144566 8889988765431 112333466789999999887311
Q ss_pred ccCCccccCCCCCCcccccccccccceEecCCCccccccchhhh--ccCCCCeeeccc--ccCCCCC-----CCCC--CC
Q 046036 101 GSIPFSIGKLQNLQKLNPLATSLYSFQLNLAENNLTGNIPESLE--NLTSLQILNLSC--NHLGGSI-----PKPS--GL 169 (614)
Q Consensus 101 ~~~p~~~~~l~~L~~L~l~~~~~~l~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~--N~l~~~~-----p~~~--~~ 169 (614)
.++. +. +++|+.|+ |..|.++......+. .+++|++|+|+. |...+.. ...+ ..
T Consensus 186 -~l~~-~~-~~~L~~L~------------L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~ 250 (362)
T 2ra8_A 186 -SIGK-KP-RPNLKSLE------------IISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDR 250 (362)
T ss_dssp -BCCS-CB-CTTCSEEE------------EECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTT
T ss_pred -eecc-cc-CCCCcEEE------------EecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCC
Confidence 2222 32 66677666 888877654444554 688898888863 2221110 0111 24
Q ss_pred CCCCCEEEcCCCCCccCCccccc---CCCCCceeccCCccCCC
Q 046036 170 FSTLSSIDFAHNNFNGSLPLEVG---SLSNTQELDFSEHMLSD 209 (614)
Q Consensus 170 l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~ls~N~l~~ 209 (614)
+++|+.|+|.+|.++...+..+. .+++|++|+|+.|.+++
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 66777777777776543322222 34556666666665543
No 404
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.92 E-value=5.8e-08 Score=100.02 Aligned_cols=82 Identities=11% Similarity=0.051 Sum_probs=50.2
Q ss_pred ccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcCC
Q 046036 7 IGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPKY 86 (614)
Q Consensus 7 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~l 86 (614)
+....+|+.+.+. ..++.+...+|.++++|+.++|..+ ++.+...+ |.+. +|+.+.+..+ ++.....+|..
T Consensus 42 ~~~~~~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~a---F~~c--~l~~i~~~~~-l~~I~~~aF~~- 112 (379)
T 4h09_A 42 YKDRDRISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VTSIGDGA---FADT--KLQSYTGMER-VKKFGDYVFQG- 112 (379)
T ss_dssp GGGGGGCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CCEECTTT---TTTC--CCCEEEECTT-CCEECTTTTTT-
T ss_pred cccccCCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ceEechhh---hcCC--CCceEECCce-eeEeccceecc-
Confidence 3445678888775 3466667778888888888888654 66455555 4443 4666666543 44333344443
Q ss_pred CCCCEEeccCC
Q 046036 87 FNLIQLGLDRN 97 (614)
Q Consensus 87 ~~L~~L~L~~N 97 (614)
.+|+.+.+..+
T Consensus 113 ~~L~~i~lp~~ 123 (379)
T 4h09_A 113 TDLDDFEFPGA 123 (379)
T ss_dssp CCCSEEECCTT
T ss_pred CCcccccCCCc
Confidence 36777777544
No 405
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.72 E-value=5.1e-10 Score=120.63 Aligned_cols=111 Identities=17% Similarity=0.209 Sum_probs=79.6
Q ss_pred CCCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------CCceeeCCCCCeeecccccccccC
Q 046036 392 GNDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------PSNVLLDYDMTAYVGDFGLARFLP 457 (614)
Q Consensus 392 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------~~NILld~~~~~kl~DfGla~~~~ 457 (614)
.++..++|||||++|+|.+++.. .+.| ..+++.++ |+|||++. .+||+|||+++...
T Consensus 410 ~~~~~~lVmE~~~ggsL~~~l~~-----~~~i--~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 410 DLDNKRIMMSYINGKLAKDVIED-----NLDI--AYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp ETTTTEEEEECCCSEEHHHHSTT-----CTHH--HHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred eCCccEEEEECCCCCCHHHHHHH-----HHHH--HHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 45567999999999999999975 1222 22222222 99999999 99999999999875
Q ss_pred CCCCCCCCCCcCcccccccccccc-cc----cCCCCccCceeehhHHHHHHHhCCCCCC
Q 046036 458 TNVTNPMKGQSNSAAVWGSIGYNM-EW----VARYQHKGKGYSCGILLLEIMTGKRPTD 511 (614)
Q Consensus 458 ~~~~~~~~~~~~~~~~~gt~~y~a-E~----~~~~~~k~DVySfGvvllElltG~~p~~ 511 (614)
................+||+.|+| |+ ...|+.++|+||..+-.+|-+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 432100000001235789999977 87 2567888999999999999999888774
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.70 E-value=6.2e-07 Score=92.23 Aligned_cols=254 Identities=9% Similarity=0.060 Sum_probs=132.8
Q ss_pred cccCCCCCCeeeecCCcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCCcccccCCCCCcC
Q 046036 6 EIGNLFRLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGNQFAGDIPAGIPK 85 (614)
Q Consensus 6 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N~l~~~~p~~~~~ 85 (614)
+|.++.+|+.++|..+ ++.+...+|.++ +|+.+.+..+ ++.+.... |... +|+.+.+..+- +......|.+
T Consensus 64 aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~a---F~~~--~L~~i~lp~~~-~~i~~~~F~~ 134 (379)
T 4h09_A 64 NFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYV---FQGT--DLDDFEFPGAT-TEIGNYIFYN 134 (379)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTT---TTTC--CCSEEECCTTC-CEECTTTTTT
T ss_pred HhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccce---eccC--CcccccCCCcc-cccccccccc
Confidence 5777888999988654 776777788887 5888877654 55444444 4442 78888887653 3234444544
Q ss_pred CCCCCEEeccCCcCcccCCccccCCCCCCccccccccc------------------------ccceEecCCCccccccch
Q 046036 86 YFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLNPLATSL------------------------YSFQLNLAENNLTGNIPE 141 (614)
Q Consensus 86 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~~~~------------------------~l~~L~L~~N~l~~~~~~ 141 (614)
.+|+.+.+..+ ++......|..+.+++.+.+..... .+..+.+..+ .......
T Consensus 135 -~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~ 211 (379)
T 4h09_A 135 -SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPST-VKTVTAY 211 (379)
T ss_dssp -CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTT-CCEECTT
T ss_pred -ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccc-eeEEeec
Confidence 36777776543 4546666777777777665311111 0111111111 1112223
Q ss_pred hhhccCCCCeeecccccCCCCCCCCCCCCCCCCEEEcCCCCCccCCcccccCCCCCceeccCCccCCCCccccccCcccc
Q 046036 142 SLENLTSLQILNLSCNHLGGSIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLSNTQELDFSEHMLSDEIPITLGNRSKF 221 (614)
Q Consensus 142 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 221 (614)
.+....+|+.+.+..+ +.......+.....|+.+.+..+ ++......|.++.+|+.+.+..+ +.......|.++.+|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3444455555554433 22233344445555555555543 33333444555555555555432 333334455555555
Q ss_pred hHHhccCccccccCCccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECc
Q 046036 222 EHLLLGGNMFQGRIPPFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLS 275 (614)
Q Consensus 222 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 275 (614)
+.+.+.++.++.+-..+|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+.
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 55555555555444445555555555555433 443444455555555555443
No 407
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.51 E-value=6.9e-09 Score=100.08 Aligned_cols=107 Identities=23% Similarity=0.275 Sum_probs=66.3
Q ss_pred CCCCCCCcE--EecccccCcccCCcChhh-hccccccccEEEccCCcccc--cCCCCCcCCCCCCEEeccCCcCcccCCc
Q 046036 31 LSPTSKLTY--LSLFSNNLHGIIPPSLDS-FTNLSTKLRILDAGGNQFAG--DIPAGIPKYFNLIQLGLDRNCLAGSIPF 105 (614)
Q Consensus 31 ~~~l~~L~~--L~L~~N~l~~~~p~~~~~-~~~l~~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 105 (614)
|...+.|+. ++++.|... .++..+.. ..+++ +|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. .
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~-~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~ 212 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIP-ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--R 212 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCT-TCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--G
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCC-CCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--h
Confidence 444445555 666777443 22222211 13455 78888888888876 3455566788888888888888754 2
Q ss_pred cccCCC--CCCcccccccccccceEecCCCccccccc-------hhhhccCCCCeee
Q 046036 106 SIGKLQ--NLQKLNPLATSLYSFQLNLAENNLTGNIP-------ESLENLTSLQILN 153 (614)
Q Consensus 106 ~~~~l~--~L~~L~l~~~~~~l~~L~L~~N~l~~~~~-------~~~~~l~~L~~L~ 153 (614)
.+..+. +|++| +|++|.+.+..| ..+..+++|+.||
T Consensus 213 ~l~~l~~l~L~~L------------~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 213 ELDKIKGLKLEEL------------WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGGTTSCCSEE------------ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhhcccCCcceE------------EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 344444 44444 488888876554 2467888888876
No 408
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=1.9e-08 Score=92.21 Aligned_cols=18 Identities=17% Similarity=0.145 Sum_probs=9.3
Q ss_pred CCCCCCCcEEecccc-cCc
Q 046036 31 LSPTSKLTYLSLFSN-NLH 48 (614)
Q Consensus 31 ~~~l~~L~~L~L~~N-~l~ 48 (614)
+...++|++|+|++| .+.
T Consensus 32 l~~~~~L~~L~L~~n~~i~ 50 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIP 50 (185)
T ss_dssp HTTCTTCCEEECTTCTTCC
T ss_pred HhcCCCCCEEEecCCCCCC
Confidence 344455555555555 554
No 409
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.44 E-value=1.8e-08 Score=92.33 Aligned_cols=96 Identities=16% Similarity=0.210 Sum_probs=67.6
Q ss_pred cccCCCCCCeeeecCC-ccccc----CCcCCCCCCCCcEEecccccCcccCCcChhh-hccccccccEEEccCCccccc-
Q 046036 6 EIGNLFRLQNLNFGNS-TVQGE----IPSHLSPTSKLTYLSLFSNNLHGIIPPSLDS-FTNLSTKLRILDAGGNQFAGD- 78 (614)
Q Consensus 6 ~~~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-~~~l~~~L~~L~L~~N~l~~~- 78 (614)
.+...++|++|+|++| .|... +.+.+...++|++|+|++|.|....-..+.. +...+ +|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~-~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNN-TLKSLNVESNFISGSG 109 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCS-SCCEEECCSSCCCHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCC-CcCEEECcCCcCCHHH
Confidence 4556889999999999 88743 3455677889999999999997433222211 33444 788888888888743
Q ss_pred ---CCCCCcCCCCCCEEec--cCCcCccc
Q 046036 79 ---IPAGIPKYFNLIQLGL--DRNCLAGS 102 (614)
Q Consensus 79 ---~p~~~~~l~~L~~L~L--~~N~l~~~ 102 (614)
+...+...++|++|+| ++|.++..
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 3445666677888888 77777643
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.40 E-value=2.8e-08 Score=95.81 Aligned_cols=63 Identities=24% Similarity=0.297 Sum_probs=28.2
Q ss_pred ccCCCCeeecccccCCC--CCCCCCCCCCCCCEEEcCCCCCccCCcccccCCC--CCceeccCCccCCC
Q 046036 145 NLTSLQILNLSCNHLGG--SIPKPSGLFSTLSSIDFAHNNFNGSLPLEVGSLS--NTQELDFSEHMLSD 209 (614)
Q Consensus 145 ~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~ls~N~l~~ 209 (614)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|.|++. ..+..+. +|++|+|++|.+.+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 34455555555555543 1223333445555555555555432 1222222 45555555555544
No 411
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.99 E-value=9.2e-07 Score=79.02 Aligned_cols=83 Identities=12% Similarity=0.108 Sum_probs=40.4
Q ss_pred CCCeeeecCCcccccCCcCCCCCCCCcEEeccccc-CcccCCcChhhhccc---cccccEEEccCCc-ccccCCCCCcCC
Q 046036 12 RLQNLNFGNSTVQGEIPSHLSPTSKLTYLSLFSNN-LHGIIPPSLDSFTNL---STKLRILDAGGNQ-FAGDIPAGIPKY 86 (614)
Q Consensus 12 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~~~~l---~~~L~~L~L~~N~-l~~~~p~~~~~l 86 (614)
+|+.|||++|.|+..--..+.++++|++|+|++|. |+.. .+..+..+ ..+|++|+|++|. ++..--..+..+
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~---gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~ 138 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDG---CLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHF 138 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHH---HHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHH---HHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcC
Confidence 45666666666555444455556666666666653 4422 11122221 1145556665553 443222234455
Q ss_pred CCCCEEeccCC
Q 046036 87 FNLIQLGLDRN 97 (614)
Q Consensus 87 ~~L~~L~L~~N 97 (614)
++|++|+|+++
T Consensus 139 ~~L~~L~L~~c 149 (176)
T 3e4g_A 139 RNLKYLFLSDL 149 (176)
T ss_dssp TTCCEEEEESC
T ss_pred CCCCEEECCCC
Confidence 55555555554
No 412
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.67 E-value=7.9e-06 Score=72.93 Aligned_cols=30 Identities=13% Similarity=0.210 Sum_probs=13.3
Q ss_pred CCCEEeccCCcCcccCCccccCCCCCCccc
Q 046036 88 NLIQLGLDRNCLAGSIPFSIGKLQNLQKLN 117 (614)
Q Consensus 88 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 117 (614)
+|++|||+++.++...-..+.++++|+.|+
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~ 91 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIR 91 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEE
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEE
Confidence 455555555554433333334444444433
No 413
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=97.57 E-value=3.9e-05 Score=75.14 Aligned_cols=57 Identities=16% Similarity=0.116 Sum_probs=41.0
Q ss_pred CceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------CCceeeCCCCCeeecccccccccC
Q 046036 394 DFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------PSNVLLDYDMTAYVGDFGLARFLP 457 (614)
Q Consensus 394 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------~~NILld~~~~~kl~DfGla~~~~ 457 (614)
+..++|||||++|+|.+ +.... . .....+++.++ |+|||++ ++.+||+|||+|+...
T Consensus 173 ~~~~lvmE~~~g~~L~~-l~~~~---~--~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~~ 243 (282)
T 1zar_A 173 EGNAVLMELIDAKELYR-VRVEN---P--DEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVG 243 (282)
T ss_dssp ETTEEEEECCCCEEGGG-CCCSC---H--HHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEETT
T ss_pred cceEEEEEecCCCcHHH-cchhh---H--HHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeECC
Confidence 45699999999999999 54211 1 12223333333 9999999 9999999999997543
No 414
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.22 E-value=5.6e-05 Score=68.79 Aligned_cols=19 Identities=21% Similarity=0.251 Sum_probs=11.1
Q ss_pred hhhhccCCCCeeecccccC
Q 046036 141 ESLENLTSLQILNLSCNHL 159 (614)
Q Consensus 141 ~~~~~l~~L~~L~L~~N~l 159 (614)
..+..-+.|+.|+++.|.+
T Consensus 151 ~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 151 MAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHCSSCCEEECCCCCH
T ss_pred HHHHhCCCcCeEeccCCCc
Confidence 4455556666666665543
No 415
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.02 E-value=0.00019 Score=65.22 Aligned_cols=66 Identities=12% Similarity=0.192 Sum_probs=35.0
Q ss_pred hhhccCCCCeeecccccCCCC----CCCCCCCCCCCCEEEcCCC---CCcc----CCcccccCCCCCceeccCCccC
Q 046036 142 SLENLTSLQILNLSCNHLGGS----IPKPSGLFSTLSSIDFAHN---NFNG----SLPLEVGSLSNTQELDFSEHML 207 (614)
Q Consensus 142 ~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N---~l~~----~~~~~~~~l~~L~~L~ls~N~l 207 (614)
.+..-+.|++|+|++|.|... +-..+..-+.|++|+|++| .+.. .+...+..-+.|+.|+++.|.+
T Consensus 93 aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 93 LIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 344445666666666666522 1123344455777777654 2221 1223345556777777776654
No 416
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.69 E-value=0.0022 Score=54.35 Aligned_cols=36 Identities=19% Similarity=0.062 Sum_probs=19.7
Q ss_pred cccEEEccCCcccccCCCCCcCCCCCCEEeccCCcC
Q 046036 64 KLRILDAGGNQFAGDIPAGIPKYFNLIQLGLDRNCL 99 (614)
Q Consensus 64 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 99 (614)
+|++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 455555555555544444455555555555555554
No 417
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.41 E-value=0.0045 Score=52.35 Aligned_cols=50 Identities=22% Similarity=0.390 Sum_probs=30.8
Q ss_pred cEEEccCCccc-ccCCCCCcCCCCCCEEeccCCcCcccCCccccCCCCCCccc
Q 046036 66 RILDAGGNQFA-GDIPAGIPKYFNLIQLGLDRNCLAGSIPFSIGKLQNLQKLN 117 (614)
Q Consensus 66 ~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 117 (614)
..++.+++.++ ..+|..+. .+|++|+|++|+|+.+.+..|..+++|+.|+
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 61 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAH 61 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEE
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEE
Confidence 35777777775 24555443 2677777777777755555566666666555
No 418
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=96.21 E-value=0.002 Score=61.92 Aligned_cols=22 Identities=27% Similarity=0.258 Sum_probs=19.9
Q ss_pred CCceeeCCCCCeeecccccccccC
Q 046036 434 PSNVLLDYDMTAYVGDFGLARFLP 457 (614)
Q Consensus 434 ~~NILld~~~~~kl~DfGla~~~~ 457 (614)
|+|||+++ .++|+|||+|....
T Consensus 199 p~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEETT
T ss_pred HHHEEEcC--cEEEEECcccccCC
Confidence 99999998 99999999997653
No 419
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=89.00 E-value=0.19 Score=50.75 Aligned_cols=54 Identities=9% Similarity=0.102 Sum_probs=35.8
Q ss_pred eeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC--------------CCceeeCCCCC----------eeecccc
Q 046036 396 KALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI--------------PSNVLLDYDMT----------AYVGDFG 451 (614)
Q Consensus 396 ~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i--------------~~NILld~~~~----------~kl~DfG 451 (614)
.+|||||+++++|.++..... ...+ + .+++.++ |.|||+++++. +.|.||+
T Consensus 186 ~~LVME~i~G~~L~~l~~~~~-~~~l-~---~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~ 260 (397)
T 4gyi_A 186 HTIVMSLVDALPMRQVSSVPD-PASL-Y---ADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFP 260 (397)
T ss_dssp TEEEEECCSCEEGGGCCCCSC-HHHH-H---HHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCT
T ss_pred ceEEEEecCCccHhhhcccHH-HHHH-H---HHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeC
Confidence 379999999999988764321 1111 1 1222222 99999988763 7899999
Q ss_pred ccc
Q 046036 452 LAR 454 (614)
Q Consensus 452 la~ 454 (614)
-+-
T Consensus 261 Q~V 263 (397)
T 4gyi_A 261 QMV 263 (397)
T ss_dssp TCE
T ss_pred Ccc
Confidence 764
No 420
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=81.82 E-value=0.27 Score=48.00 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=41.8
Q ss_pred CCceeeCC--CCCeeecccccccccCCCCCC-CCCCC---cC---ccccccccccc--ccccCCCCccCceeehhHHHHH
Q 046036 434 PSNVLLDY--DMTAYVGDFGLARFLPTNVTN-PMKGQ---SN---SAAVWGSIGYN--MEWVARYQHKGKGYSCGILLLE 502 (614)
Q Consensus 434 ~~NILld~--~~~~kl~DfGla~~~~~~~~~-~~~~~---~~---~~~~~gt~~y~--aE~~~~~~~k~DVySfGvvllE 502 (614)
|.||++++ ...+.|.||+.+..-....+- ..... .. .......+++. +++..+.....+.|++|+++++
T Consensus 200 ~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~ 279 (304)
T 3sg8_A 200 SDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYG 279 (304)
T ss_dssp GGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999998 456789999998754321100 00000 00 00000001110 1111122233578999999999
Q ss_pred HHhCCCCCC
Q 046036 503 IMTGKRPTD 511 (614)
Q Consensus 503 lltG~~p~~ 511 (614)
+.+|+.++.
T Consensus 280 ~~~g~~~~~ 288 (304)
T 3sg8_A 280 KEYGYMDWY 288 (304)
T ss_dssp HHTTCHHHH
T ss_pred HHcCCHHHH
Confidence 999988764
No 421
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=56.87 E-value=4.4 Score=37.95 Aligned_cols=21 Identities=19% Similarity=0.200 Sum_probs=16.7
Q ss_pred CCceeeCCCCCeeeccccccc
Q 046036 434 PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 434 ~~NILld~~~~~kl~DfGla~ 454 (614)
|.||+++++..+.|.||+.+.
T Consensus 192 ~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 192 DSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTSEEEETTEEEEECCCTTCE
T ss_pred cCcEEEECCcEEEEEEchhcc
Confidence 899999876556799998864
No 422
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=54.65 E-value=11 Score=37.21 Aligned_cols=22 Identities=18% Similarity=0.214 Sum_probs=18.0
Q ss_pred CCceeeCCCCC--eeecccccccc
Q 046036 434 PSNVLLDYDMT--AYVGDFGLARF 455 (614)
Q Consensus 434 ~~NILld~~~~--~kl~DfGla~~ 455 (614)
+.||+++.+.. +.|.||+.+..
T Consensus 225 ~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 225 LDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp GGGEEECSSSSCEEEECCCTTCEE
T ss_pred CCcEEEeCCCCcEEEEECcccccc
Confidence 89999997753 68999999864
No 423
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=50.32 E-value=27 Score=31.74 Aligned_cols=25 Identities=12% Similarity=0.041 Sum_probs=19.7
Q ss_pred CCCccCceeehhHHHHHHHhCCCCC
Q 046036 486 RYQHKGKGYSCGILLLEIMTGKRPT 510 (614)
Q Consensus 486 ~~~~k~DVySfGvvllElltG~~p~ 510 (614)
..+++.=|||+|+++|.-+--..|-
T Consensus 112 ~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 112 QCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cchHHHHHHHHHHHHHHHhhcCCCc
Confidence 4567788999999999988755553
No 424
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=45.84 E-value=8.3 Score=36.20 Aligned_cols=21 Identities=19% Similarity=0.113 Sum_probs=17.2
Q ss_pred CCceeeCCCCCeeeccccccc
Q 046036 434 PSNVLLDYDMTAYVGDFGLAR 454 (614)
Q Consensus 434 ~~NILld~~~~~kl~DfGla~ 454 (614)
+.||+++++..+-|.||+.+.
T Consensus 202 ~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 202 LDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TTSEEEETTEEEEECCCTTCE
T ss_pred CCeEEEECCeEEEEEECcccc
Confidence 799999887667788988874
No 425
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=44.24 E-value=42 Score=30.29 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=50.1
Q ss_pred ccCHHHHHHHHhhC----------------CCceeeCCCCCeeecccccccccCCCCCCCCCCCcCcccccccccccccc
Q 046036 420 RLDLAEGLKIAVDI----------------PSNVLLDYDMTAYVGDFGLARFLPTNVTNPMKGQSNSAAVWGSIGYNMEW 483 (614)
Q Consensus 420 ~l~~~~~~~ia~~i----------------~~NILld~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aE~ 483 (614)
.++-..|++++..+ |+||.+|.++.|++.=.|+...+.+..
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~~r~tf~L~P~NL~f~~~~~p~i~~RGik~~l~P~~----------------------- 133 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNRTRYTFVLAPDELFFTRDGLPIAKTRGLQNVVDPLP----------------------- 133 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGGSSEECCCSGGGEEECTTSCEEESCCEETTTBSCCC-----------------------
T ss_pred hcCHHHHHHHHHHHHHHHHHhcCceEEEEecceEEEcCCCCEEEEEccCccCCCCCC-----------------------
Confidence 46777888888877 999999999999999888865443321
Q ss_pred cCCCCccCceeehhHHHHHHHhCCCCCCcccccC
Q 046036 484 VARYQHKGKGYSCGILLLEIMTGKRPTDEMFADC 517 (614)
Q Consensus 484 ~~~~~~k~DVySfGvvllElltG~~p~~~~~~~~ 517 (614)
.++..=.-.+=+++..+++++..|+....+.
T Consensus 134 ---~~ee~fL~qyKAliiall~~K~~Fe~l~~G~ 164 (215)
T 4ann_A 134 ---VSEAEFLTRYKALVICAFNEKQSFDALVEGN 164 (215)
T ss_dssp ---CCHHHHHHHHHHHHHHHHCTTCCHHHHHHSC
T ss_pred ---CCHHHHHHHHHHHHHHHHcCCCCHHHHHcCh
Confidence 0111112345678888999999887654443
No 426
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=39.44 E-value=69 Score=24.77 Aligned_cols=48 Identities=17% Similarity=0.167 Sum_probs=27.9
Q ss_pred CcccccCCcCCCCCCCCcEEecccccCcccCCcChhhhccccccccEEEccCC
Q 046036 21 STVQGEIPSHLSPTSKLTYLSLFSNNLHGIIPPSLDSFTNLSTKLRILDAGGN 73 (614)
Q Consensus 21 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~l~~~L~~L~L~~N 73 (614)
..++.+-..+|.++++|+.+.|-.+ ++.+.... |.++. +|+.+.+.+.
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~a---F~~C~-~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGM---FSGCT-ALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTS---STTCT-TCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHH---HhccC-CccEEEEcCC
Confidence 3455555666777777777766554 44344444 55555 6666666543
No 427
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=37.53 E-value=24 Score=22.82 Aligned_cols=7 Identities=43% Similarity=1.165 Sum_probs=3.5
Q ss_pred hhhhccc
Q 046036 351 GVFQKRK 357 (614)
Q Consensus 351 ~~~~~r~ 357 (614)
++++|||
T Consensus 32 ~~~~RRr 38 (44)
T 2ks1_B 32 GLFMRRR 38 (44)
T ss_dssp HHHHHTT
T ss_pred HHHhhhh
Confidence 4455544
No 428
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.23 E-value=46 Score=25.83 Aligned_cols=39 Identities=15% Similarity=0.105 Sum_probs=17.2
Q ss_pred ccccCCCccceEEccCCcCcccCCcccCCCCCCCEEECcC
Q 046036 237 PFFGSFKGTIDLNLSHNNLSGTIPKELETLPFLENLNLSF 276 (614)
Q Consensus 237 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 276 (614)
..|.++.+|+.+.|-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34444444444444432 2223344455555555555443
No 429
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=33.20 E-value=23 Score=34.19 Aligned_cols=22 Identities=23% Similarity=0.212 Sum_probs=18.6
Q ss_pred CCceeeCCCCCeeecccccccc
Q 046036 434 PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 434 ~~NILld~~~~~kl~DfGla~~ 455 (614)
|.||+++.+..+.|.||+.+..
T Consensus 216 ~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 216 ANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp GGGEEEETTEEEEECCCTTCEE
T ss_pred CCcEEEECCceEEEECCccccc
Confidence 8999999866678999999854
No 430
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=28.75 E-value=28 Score=22.47 Aligned_cols=7 Identities=43% Similarity=0.862 Sum_probs=3.4
Q ss_pred hhhhccc
Q 046036 351 GVFQKRK 357 (614)
Q Consensus 351 ~~~~~r~ 357 (614)
++++|||
T Consensus 31 ~~~~RRR 37 (44)
T 2l2t_A 31 AVYVRRK 37 (44)
T ss_dssp HHHHHTT
T ss_pred HHHhhhh
Confidence 4455544
No 431
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=25.02 E-value=84 Score=28.42 Aligned_cols=88 Identities=14% Similarity=0.191 Sum_probs=54.6
Q ss_pred CCceeEEecccCCCchhhhccCCCCCcccCHHHHHHHHhhC-----------------CCceeeCCCCCeeecccccccc
Q 046036 393 NDFKALAFEFMPNGSLESWLHPNEATRRLDLAEGLKIAVDI-----------------PSNVLLDYDMTAYVGDFGLARF 455 (614)
Q Consensus 393 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~~i-----------------~~NILld~~~~~kl~DfGla~~ 455 (614)
+|...+.|+--+++-=+..+. .++-..|++++..+ |.||.+|.++.|++.=.|+-..
T Consensus 60 eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~r~tf~l~P~NL~f~~~~~p~i~hRGi~~~ 133 (219)
T 4ano_A 60 EDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSARRLIFIVCPENLMFNRALEPFFLHVGVKES 133 (219)
T ss_dssp SSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSSSEECCCCGGGEEECTTCCEEESCCEETTT
T ss_pred CCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhCceeEEEeCceEEEeCCCcEEEEEcCCccc
Confidence 455555565544433333333 35667777777766 9999999999999998888654
Q ss_pred cCCCCCCCCCCCcCcccccccccccccccCCCCccCceeehhHHHHHHHhCCCCCCc
Q 046036 456 LPTNVTNPMKGQSNSAAVWGSIGYNMEWVARYQHKGKGYSCGILLLEIMTGKRPTDE 512 (614)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~gt~~y~aE~~~~~~~k~DVySfGvvllElltG~~p~~~ 512 (614)
+.+... ++.-=.-.+=+++..++.++..|++
T Consensus 134 lpP~e~--------------------------~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 134 LPPDEW--------------------------DDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp BSSCSC--------------------------CHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred CCCCCC--------------------------CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 433210 1100122455677788888877764
No 432
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=22.72 E-value=30 Score=22.32 Aligned_cols=7 Identities=43% Similarity=0.971 Sum_probs=3.2
Q ss_pred hhhhccc
Q 046036 351 GVFQKRK 357 (614)
Q Consensus 351 ~~~~~r~ 357 (614)
++|.|||
T Consensus 32 ~~~~RRR 38 (44)
T 2jwa_A 32 GILIKRR 38 (44)
T ss_dssp HHHHHHH
T ss_pred Hhheehh
Confidence 4444444
Done!