BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046037
(388 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3P4E|A Chain A, Phosphoribosylformylglycinamidine Cyclo-Ligase From Vibrio
Cholerae
Length = 349
Score = 305 bits (781), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 205/310 (66%), Gaps = 15/310 (4%)
Query: 66 LTYKDSGVDIDAGSELVRRI-------------AKMAXXXXXXXXXXXXXDSYLVAGTDG 112
L+YKD+GVDIDAG+ LV RI + LV+GTDG
Sbjct: 11 LSYKDAGVDIDAGNALVERIKGAVKRTRRPEVMGGLGGFGALCELPTKYKHPVLVSGTDG 70
Query: 113 VGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGI 172
VGTKL+LA + HDTIGIDLVAM VND++ GA+PLFFLDY+AT L+VD A +VI GI
Sbjct: 71 VGTKLRLALDMKKHDTIGIDLVAMCVNDLIVQGAEPLFFLDYYATGKLDVDTAAEVISGI 130
Query: 173 VDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPS 232
DGC Q+ C L+GGETAEMP Y +YD++GF VG+V+K+ +IDG + GD LI + S
Sbjct: 131 ADGCLQAGCALIGGETAEMPGMYEGEDYDVAGFCVGVVEKEEIIDGSKVQVGDALIAVGS 190
Query: 233 SGVHSNGFSLVRRVLAQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGI 292
SG HSNG+SLVR++L S ++L + T+GE L+APT IY+K L +I+E + I
Sbjct: 191 SGPHSNGYSLVRKILEVSKADKNERLAGK--TIGEHLLAPTKIYIKSGLKLIAEHDIHAI 248
Query: 293 AHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMV 352
+HITGGGF +NIPRV P+G AVI SW+ P +F+W+Q+ G + EM RTFN G+G++
Sbjct: 249 SHITGGGFWENIPRVLPEGTKAVIDGKSWEWPVIFQWLQEKGNVTTHEMYRTFNCGVGLI 308
Query: 353 LVVSKETSHT 362
+ + K+ ++
Sbjct: 309 IALPKDQANA 318
>pdb|1CLI|A Chain A, X-Ray Crystal Structure Of Aminoimidazole Ribonucleotide
Synthetase (Purm), From The E. Coli Purine Biosynthetic
Pathway, At 2.5 A Resolution
pdb|1CLI|B Chain B, X-Ray Crystal Structure Of Aminoimidazole Ribonucleotide
Synthetase (Purm), From The E. Coli Purine Biosynthetic
Pathway, At 2.5 A Resolution
pdb|1CLI|C Chain C, X-Ray Crystal Structure Of Aminoimidazole Ribonucleotide
Synthetase (Purm), From The E. Coli Purine Biosynthetic
Pathway, At 2.5 A Resolution
pdb|1CLI|D Chain D, X-Ray Crystal Structure Of Aminoimidazole Ribonucleotide
Synthetase (Purm), From The E. Coli Purine Biosynthetic
Pathway, At 2.5 A Resolution
Length = 345
Score = 299 bits (766), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 159/305 (52%), Positives = 200/305 (65%), Gaps = 18/305 (5%)
Query: 66 LTYKDSGVDIDAGSELVRRIAKMAXXX-------------XXXXXXXXXXDSYLVAGTDG 112
L+YKD+GVDIDAG+ LV RI + + LV+GTDG
Sbjct: 7 LSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGGFGALCALPQKYREPVLVSGTDG 66
Query: 113 VGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGI 172
VGTKL+LA + HDTIGIDLVAM VND+V GA+PLFFLDY+AT L+VD A VI GI
Sbjct: 67 VGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLDVDTASAVISGI 126
Query: 173 VDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPS 232
+GC QS C L+GGETAEMP Y +YD++GF VG+V+K +IDG + GDVLI L S
Sbjct: 127 AEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEIIDGSKVSDGDVLIALGS 186
Query: 233 SGVHSNGFSLVRRVLAQSDLSLKDQLPSE--NTTLGEALMAPTVIYVKQVLDIISEGGVK 290
SG HSNG+SLVR++L ++S D +E L + L+APT IYVK VL++I + V
Sbjct: 187 SGPHSNGYSLVRKIL---EVSGCDPQTTELDGKPLADHLLAPTRIYVKSVLELIEKVDVH 243
Query: 291 GIAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIG 350
IAH+TGGGF +NIPRV P AVI E SW+ P VF W+Q AG +E EM RTFN G+G
Sbjct: 244 AIAHLTGGGFWENIPRVLPDNTQAVIDESSWQWPEVFNWLQTAGNVEHHEMYRTFNCGVG 303
Query: 351 MVLVV 355
M++ +
Sbjct: 304 MIIAL 308
>pdb|2V9Y|A Chain A, Human Aminoimidazole Ribonucleotide Synthetase
pdb|2V9Y|B Chain B, Human Aminoimidazole Ribonucleotide Synthetase
Length = 334
Score = 291 bits (745), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/282 (52%), Positives = 190/282 (67%), Gaps = 4/282 (1%)
Query: 103 DSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEV 162
D L +GTDGVGTKLK+A HDTIG DLVAM VNDI+ GA+PLFFLDYF+ L++
Sbjct: 26 DPLLASGTDGVGTKLKIAQLCNKHDTIGQDLVAMCVNDILAQGAEPLFFLDYFSCGKLDL 85
Query: 163 DLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDG-KNI 221
+ E V+ GI C ++ C LLGGETAEMPD Y GEYDL+GFAVG +++D + + I
Sbjct: 86 SVTEAVVAGIAKACGKAGCALLGGETAEMPDMYPPGEYDLAGFAVGAMERDQKLPHLERI 145
Query: 222 VPGDVLIGLPSSGVHSNGFSLVRRVLAQSDLSLKDQLPS--ENTTLGEALMAPTVIYVKQ 279
GDV++G+ SSG+HSNGFSLVR+++A+S L P + TLG+ L+ PT IY
Sbjct: 146 TEGDVVVGIASSGLHSNGFSLVRKIVAKSSLQYSSPAPDGCGDQTLGDLLLTPTRIYSHS 205
Query: 280 VLDIISEGGVKGIAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDS 339
+L ++ G VK AHITGGG +NIPRV P+ LG + +W++P VF W+QQ G + +
Sbjct: 206 LLPVLRSGHVKAFAHITGGGLLENIPRVLPEKLGVDLDAQTWRIPRVFSWLQQEGHLSEE 265
Query: 340 EMRRTFNMGIGMVLVVSKETSHTILEG-GCGTYEAYHIGEVV 380
EM RTFN G+G VLVVSKE + IL G EA+ IG VV
Sbjct: 266 EMARTFNCGVGAVLVVSKEQTEQILRGIQQHKEEAWVIGSVV 307
>pdb|2Z01|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole
Synthetase From Geobacillus Kaustophilus
Length = 348
Score = 290 bits (741), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 207/338 (61%), Gaps = 16/338 (4%)
Query: 67 TYKDSGVDIDAGSELVRRIAKMAXXXXXXX--------------XXXXXXDSYLVAGTDG 112
YK +GVDI+AG + V + + L++GTDG
Sbjct: 6 AYKQAGVDIEAGYQAVALMKEHVQKTMRPEVLGGIGGFGGLFDLSALGYRQPVLISGTDG 65
Query: 113 VGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGI 172
VGTKLKLAF HDTIGID VAM VNDI+ GA+PLFFLDY A + ++KG+
Sbjct: 66 VGTKLKLAFLLDRHDTIGIDCVAMCVNDIIVQGAEPLFFLDYIACGKAVPEKIAAIVKGV 125
Query: 173 VDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPS 232
DGC ++ C L+GGETAEMP Y EYDL+GFAVG+ +K+ +I G+ I GD L+GLPS
Sbjct: 126 ADGCVEAGCALIGGETAEMPGMYDEDEYDLAGFAVGVAEKERLITGETIQAGDALVGLPS 185
Query: 233 SGVHSNGFSLVRR-VLAQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKG 291
SG+HSNG+SLVRR V Q+ LSL + + LGE L+ PT IY K + + +KG
Sbjct: 186 SGLHSNGYSLVRRIVFEQAKLSLDEIYEPLDVPLGEELLKPTRIYAKLLRSVRERFTIKG 245
Query: 292 IAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGM 351
+AHITGGG +NIPR+ P G+GA I SW + +F ++++ G +E+ EM FNMGIG+
Sbjct: 246 MAHITGGGLIENIPRMLPPGIGARIQLGSWPILPIFDFLREKGSLEEEEMFSVFNMGIGL 305
Query: 352 VLVVSKETSHTILEGGCGTYE-AYHIGEVVNGEGVSYS 388
VL VS ET+ ++E E AY IGEV G GVS++
Sbjct: 306 VLAVSPETAAPLVEWLSERGEPAYIIGEVAKGAGVSFA 343
>pdb|2BTU|A Chain A, Crystal Structure Of Phosphoribosylformylglycinamidine
Cyclo-Ligase From Bacillus Anthracis At 2.3a Resolution.
pdb|2BTU|B Chain B, Crystal Structure Of Phosphoribosylformylglycinamidine
Cyclo-Ligase From Bacillus Anthracis At 2.3a Resolution
Length = 346
Score = 289 bits (739), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/340 (48%), Positives = 210/340 (61%), Gaps = 20/340 (5%)
Query: 67 TYKDSGVDIDAGSELVRRIAKMAXXXXXXX--------------XXXXXXDSYLVAGTDG 112
YK +GVDI+AG E V R+ K + LV+GTDG
Sbjct: 4 AYKQAGVDIEAGYEAVSRMKKHVQTTMRKEVLGGLGGFGGMFDLSKFALEEPVLVSGTDG 63
Query: 113 VGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGI 172
VGTKL LAF HDTIGID VAM VNDIV GA+PLFFLDY A E E ++KGI
Sbjct: 64 VGTKLMLAFMADKHDTIGIDAVAMCVNDIVVQGAEPLFFLDYIACGKAEPSKIENIVKGI 123
Query: 173 VDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPS 232
+GC+Q+ C L+GGETAEMP Y+ EYDL+GF VGIV K ++ G+ I G VLIGL S
Sbjct: 124 SEGCRQAGCALIGGETAEMPGMYSTEEYDLAGFTVGIVDKKKIVTGEKIEAGHVLIGLAS 183
Query: 233 SGVHSNGFSLVRRVLAQS-DLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKG 291
SG+HSNG+SLVR+VL + +LSL LGE L+ PT IYVK +L+++ V G
Sbjct: 184 SGIHSNGYSLVRKVLLEDGELSLDRIYGRLELPLGEELLKPTKIYVKPILELLKNHEVYG 243
Query: 292 IAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGM 351
+AHITGGGF +NIPR+ P+G+GA I SWK+ +F +Q+ G++E+ EM FNMGIGM
Sbjct: 244 MAHITGGGFIENIPRMLPEGIGAEIELGSWKIQPIFSLLQEVGKLEEKEMFNIFNMGIGM 303
Query: 352 VLVVSKETSHTI---LEGGCGTYEAYHIGEVVNGEGVSYS 388
V+ V +E + I LE T A IG V G GV+++
Sbjct: 304 VVAVKEEDAKDIVRLLEEQGET--ARIIGRTVQGAGVTFN 341
>pdb|3M84|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole
Synthetase From Francisella Tularensis
pdb|3M84|B Chain B, Crystal Structure Of Phosphoribosylaminoimidazole
Synthetase From Francisella Tularensis
pdb|3QTY|A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole
Synthetase From Francisella Tularensis Complexed With
Pyrophosphate
pdb|3QTY|B Chain B, Crystal Structure Of Phosphoribosylaminoimidazole
Synthetase From Francisella Tularensis Complexed With
Pyrophosphate
Length = 350
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 183/337 (54%), Gaps = 21/337 (6%)
Query: 66 LTYKDSGVDIDAGSELVRR----------------IAKMAXXXXXXXXXXXXXDSYLVAG 109
L Y+D+GV+I+AG++ V R + D LV
Sbjct: 7 LKYEDAGVNIEAGNQAVERXKQHVKKTFTQDVLTGLGSFGSLYSLKNIINNYDDPVLVQS 66
Query: 110 TDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVI 169
DGVGTK K+A G + +G DL + + NDIV GAKP+ FLDY A L+ + E+++
Sbjct: 67 IDGVGTKTKVAVXCGKFENLGYDLFSAATNDIVVXGAKPITFLDYVAHDKLDPAIXEELV 126
Query: 170 KGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIG 229
KG C + L+GGETAE P Y AGE D G GIV + +I+G+NI GD++ G
Sbjct: 127 KGXSKACAECGVSLVGGETAEXPGVYQAGEIDXVGVITGIVDRKRIINGENIKEGDIVFG 186
Query: 230 LPSSGVHSNGFSLVRRVLAQ-SDLSLKDQLPS-ENTTLGEALMAPTVIYVKQVLDIISEG 287
L SSG+H+NG+S R++ + D P E T+G+ L+ P + Y + D + G
Sbjct: 187 LSSSGLHTNGYSFARKLFFDVAGNKHTDTYPELEGKTIGDVLLEPHINYTNIIHDFLDNG 246
Query: 288 -GVKGIAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFN 346
+KG AHITGGGF +NIPRV P+GLGA I +DS+ PA+FK Q+ G I + E R+FN
Sbjct: 247 VDIKGXAHITGGGFIENIPRVLPQGLGAQIDKDSFATPAIFKLXQRIGDISEFEXYRSFN 306
Query: 347 MGIGMVLVVSKETSHTILE--GGCGTYEAYHIGEVVN 381
GIG ++ S++ E + Y IG++ N
Sbjct: 307 XGIGXTIIASQDQFDKXQELAKKHTNTKLYQIGKITN 343
>pdb|3MDO|A Chain A, Crystal Structure Of A Putative
Phosphoribosylformylglycinamidine Cyclo-Ligase
(Bdi_2101) From Parabacteroides Distasonis Atcc 8503 At
1.91 A Resolution
pdb|3MDO|B Chain B, Crystal Structure Of A Putative
Phosphoribosylformylglycinamidine Cyclo-Ligase
(Bdi_2101) From Parabacteroides Distasonis Atcc 8503 At
1.91 A Resolution
Length = 389
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 127/307 (41%), Gaps = 61/307 (19%)
Query: 111 DGVGTKLKLAF----ETG---IHDTIGIDLVAMSVNDIVTSGA-KPLFFLDYFATSHLEV 162
DG GTK LA+ ETG + I D + +++D++ GA + + L V
Sbjct: 56 DGAGTKSSLAYXYWKETGDLSVWKGIAQDALIXNIDDLLCVGAVDNILVSSTIGRNKLLV 115
Query: 163 DLAEKVIKGIVDGCQQ---------SDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKD 213
+VI I++G + C GGETA++ D D + K+
Sbjct: 116 --PGEVISAIINGTDELLAELREXGVGCYATGGETADVGDLVRTIIVDST--VTCRXKRS 171
Query: 214 SVIDGKNIVPGDVLIGLPSS-----------GVHSNGFSLVR-----RVLAQS------- 250
VID KNI GDV++GL SS G SNG + R + LA+
Sbjct: 172 DVIDNKNIQGGDVIVGLASSGQATYEKEYNGGXGSNGLTSARHDVFSKYLAKKYPESYDA 231
Query: 251 ----------DLSLKDQLPSENTTLGEALMAPTVIY---VKQVLDIISEGGVKGIAHITG 297
L L D++ G+ +++PT Y +K +LD + + G H +G
Sbjct: 232 AVPKELVYSGGLKLTDKIEELGIDAGKXVLSPTRTYAPVIKVLLDKL-RSQIHGXVHCSG 290
Query: 298 GGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSK 357
G T V K V ++ + +P +F+ IQ+ + SE + FN G + ++
Sbjct: 291 GAQTKVXHFVENK---RVTKDNLFPIPPLFRTIQEQSGTDWSEXYKVFNXGHRXEIYIAP 347
Query: 358 ETSHTIL 364
E + ++
Sbjct: 348 EHAEEVI 354
>pdb|3KIZ|A Chain A, Crystal Structure Of Putative
Phosphoribosylformylglycinamidine Cyclo- Ligase
(Yp_676759.1) From Cytophaga Hutchinsonii Atcc 33406 At
1.50 A Resolution
pdb|3KIZ|B Chain B, Crystal Structure Of Putative
Phosphoribosylformylglycinamidine Cyclo- Ligase
(Yp_676759.1) From Cytophaga Hutchinsonii Atcc 33406 At
1.50 A Resolution
Length = 394
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 118/289 (40%), Gaps = 56/289 (19%)
Query: 111 DGVGTKLKLAF----ETG---IHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVD 163
DG GTK LA+ ETG + I D V +++D++ GA L + +
Sbjct: 57 DGAGTKSSLAYVYWKETGDISVWKGIAQDAVIXNIDDLICVGAVDNILLSSTIGRNKNL- 115
Query: 164 LAEKVIKGIVDGCQQSDCVL---------LGGETAEMPDFYAAGEYDLSGFAVGIVKKDS 214
+ +V+ I++G ++ L GGETA++ D D + K+
Sbjct: 116 IPGEVLAAIINGTEEVLQXLRDNGIGIYSTGGETADVGDLVRTIIVDST--VTCRXKRQD 173
Query: 215 VIDGKNIVPGDVLIGLPS-----------SGVHSNGFSLVRR-----VLAQS-----DLS 253
VI +NI G+V++G S G SNG + R VLA D
Sbjct: 174 VISNENIKAGNVIVGFASYGQTSYETEYNGGXGSNGLTSARHDVFNNVLASKYPESFDPK 233
Query: 254 LKDQL----------PSENTTL--GEALMAPTVIYVKQVLDIISE--GGVKGIAHITGGG 299
+ + L P N L G+ +++PT Y +II + G + G+ H +GGG
Sbjct: 234 VPENLVYSGEXNLTDPYLNVPLDAGKLVLSPTRTYAPLXKEIIHQYKGKLDGVVHCSGGG 293
Query: 300 FTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMG 348
T + F +I ++ + VP +F+ IQ E + FN G
Sbjct: 294 QTKVLH--FTDATTHIIKDNLFDVPPLFQLIQGQSNTPWEEXYKVFNXG 340
>pdb|3D54|A Chain A, Stucture Of Purlqs From Thermotoga Maritima
pdb|3D54|E Chain E, Stucture Of Purlqs From Thermotoga Maritima
pdb|3D54|I Chain I, Stucture Of Purlqs From Thermotoga Maritima
Length = 629
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 34/235 (14%)
Query: 138 VNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAA 197
+ D++ GA+P D S + + +I+GI D +GGE + YA
Sbjct: 118 IRDVLAMGARPTAIFDSLHMSRI----IDGIIEGIADYGNSIGVPTVGGEL-RISSLYAH 172
Query: 198 GEYDLSGFAVGIVKKDSVIDGKNIVPGDVLI----GLPSSGVHSNGFSLVRRVLAQSDLS 253
++ A G+V+ D ++D K PG V++ G+H F A DL+
Sbjct: 173 NPL-VNVLAAGVVRNDMLVDSKASRPGQVIVIFGGATGRDGIHGASF-------ASEDLT 224
Query: 254 LKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVFPKG-L 312
D+ + +G+ +I + L+++ EG V+G + GG + KG L
Sbjct: 225 -GDKATKLSIQVGDPFAEKMLI--EAFLEMVEEGLVEGAQDLGAGGVLSATSELVAKGNL 281
Query: 313 GAVIYED--SWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILE 365
GA+++ D + P + W I +S+ R M +V S + + ILE
Sbjct: 282 GAIVHLDRVPLREPDMEPW---EILISESQER--------MAVVTSPQKASRILE 325
>pdb|2HS0|A Chain A, T. Maritima Purl Complexed With Atp
pdb|2HS3|A Chain A, T. Maritima Purl Complexed With Fgar
pdb|2HS4|A Chain A, T. Maritima Purl Complexed With Fgar And Amppcp
Length = 603
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 34/235 (14%)
Query: 138 VNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAA 197
+ D++ GA+P D S + + +I+GI D +GGE + YA
Sbjct: 92 IRDVLAMGARPTAIFDSLHMSRI----IDGIIEGIADYGNSIGVPTVGGEL-RISSLYAH 146
Query: 198 GEYDLSGFAVGIVKKDSVIDGKNIVPGDVLI----GLPSSGVHSNGFSLVRRVLAQSDLS 253
++ A G+V+ D ++D K PG V++ G+H F A DL+
Sbjct: 147 NPL-VNVLAAGVVRNDMLVDSKASRPGQVIVIFGGATGRDGIHGASF-------ASEDLT 198
Query: 254 LKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVFPKG-L 312
D+ + +G+ +I + L+++ EG V+G + GG + KG L
Sbjct: 199 -GDKATKLSIQVGDPFAEKMLI--EAFLEMVEEGLVEGAQDLGAGGVLSATSELVAKGNL 255
Query: 313 GAVIYED--SWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILE 365
GA+++ D + P + W I +S+ R M +V S + + ILE
Sbjct: 256 GAIVHLDRVPLREPDMEPW---EILISESQER--------MAVVTSPQKASRILE 299
>pdb|2HRU|A Chain A, T. Maritima Purl Complexed With Adp
pdb|2HRY|A Chain A, T. Maritima Purl Complexed With Amppcp
Length = 603
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 34/235 (14%)
Query: 138 VNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAA 197
+ D++ GA+P D S + + +I+GI D +GGE + YA
Sbjct: 92 IRDVLAMGARPTAIFDSLHMSRI----IDGIIEGIADYGNSIGVPTVGGEL-RISSLYAH 146
Query: 198 GEYDLSGFAVGIVKKDSVIDGKNIVPGDVLI----GLPSSGVHSNGFSLVRRVLAQSDLS 253
++ A G+V+ D ++D K PG V++ G+H F A DL+
Sbjct: 147 NPL-VNVLAAGVVRNDMLVDSKASRPGQVIVIFGGATGRDGIHGASF-------ASEDLT 198
Query: 254 LKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVFPKG-L 312
D+ + +G+ +I + L+++ EG V+G + GG + KG L
Sbjct: 199 -GDKATKLSIQVGDPFAEKMLI--EAFLEMVEEGLVEGAQDLGAGGVLSATSELVAKGNL 255
Query: 313 GAVIYED--SWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILE 365
GA+++ D + P + W I +S+ R M +V S + + ILE
Sbjct: 256 GAIVHLDRVPLREPDMEPW---EILISESQER--------MAVVTSPQKASRILE 299
>pdb|1VK3|A Chain A, Crystal Structure Of Phosphoribosylformylglycinamidine
Synthase Ii (Tm1246) From Thermotoga Maritima At 2.15 A
Resolution
Length = 615
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 138 VNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAA 197
+ D++ GA+P D S + + +I+GI D +GGE + YA
Sbjct: 104 IRDVLAXGARPTAIFDSLHXSRI----IDGIIEGIADYGNSIGVPTVGGEL-RISSLYAH 158
Query: 198 GEYDLSGFAVGIVKKDSVIDGKNIVPGDVLI----GLPSSGVHSNGFSLVRRVLAQSDLS 253
++ A G+V+ D ++D K PG V++ G+H F A DL+
Sbjct: 159 NPL-VNVLAAGVVRNDXLVDSKASRPGQVIVIFGGATGRDGIHGASF-------ASEDLT 210
Query: 254 LKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVFPKG-L 312
D+ + +G+ +I + L+ + EG V+G + GG + KG L
Sbjct: 211 -GDKATKLSIQVGDPFAEKXLI--EAFLEXVEEGLVEGAQDLGAGGVLSATSELVAKGNL 267
Query: 313 GAVIYEDSWKVP 324
GA+++ D +VP
Sbjct: 268 GAIVHLD--RVP 277
>pdb|3VTI|C Chain C, Crystal Structure Of Hype-Hypf Complex
pdb|3VTI|D Chain D, Crystal Structure Of Hype-Hypf Complex
Length = 314
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 129 IGIDLVAMSVNDIVTSGAKPLFFLDYFATSH-LEVDLAEKVIKGIVDGCQQSDCVLLGGE 187
IG V +VND GAKPLF F V+ +K++K + + +++ ++ G+
Sbjct: 49 IGKLAVCGTVNDASMRGAKPLFLTAAFIIEEGFPVEDLKKIVKSMAEAAKEAGVKIVAGD 108
Query: 188 TAEMPDFYAAGEYD---LSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVR 244
T G D ++ +G++ + + + KN PGD+++ + G H R
Sbjct: 109 T----KVVEKGSVDRIFINTSGIGVLYEGANVSIKNAKPGDIVLISGTIGDHGMAVMSAR 164
Query: 245 RVLA-----QSDLSLKDQLPSENTTLGEA---LMAPTVIYVKQVLDIISE 286
L SD++ + L + TLGEA L PT V +VL IS+
Sbjct: 165 EELQFDTPIFSDVAPLNGLIEKLMTLGEAIKVLRDPTRGGVAEVLYEISK 214
>pdb|2Z1T|A Chain A, Crystal Structure Of Hydrogenase Maturation Protein Hype
pdb|2Z1U|A Chain A, Crystal Structure Of Hydrogenase Maturation Protein Hype
In Complex With Atp
Length = 343
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 129 IGIDLVAMSVNDIVTSGAKPLFF-LDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGE 187
IG V +VND+ GA+P + + L++D+ E+V+ + +++ ++ G+
Sbjct: 70 IGTLAVHGTVNDVSMLGARPRYLSCGFILEEGLDMDILERVVASMGKAAREAGVFIVTGD 129
Query: 188 TAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVH 236
T +P A + ++ +G + D G PGD ++ S G H
Sbjct: 130 TKVVPR-GACDKMFINTTGIGEILVDPAPSGDRARPGDAILISGSMGDH 177
>pdb|2YXZ|A Chain A, Crystal Structure Of Tt0281 From Thermus Thermophilus Hb8
pdb|2YXZ|B Chain B, Crystal Structure Of Tt0281 From Thermus Thermophilus Hb8
pdb|2YXZ|C Chain C, Crystal Structure Of Tt0281 From Thermus Thermophilus Hb8
pdb|2YXZ|D Chain D, Crystal Structure Of Tt0281 From Thermus Thermophilus Hb8
Length = 311
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 129 IGIDLVAMSVNDIVTSGAKPL-FFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGE 187
+G VA + +D++ +PL F L F LE ++++G + ++ LLGG+
Sbjct: 64 VGFRGVAATASDLLAKMGRPLGFTLGLFLPEDLEEGFVLELVRGAAEAAKRLGAFLLGGD 123
Query: 188 T 188
T
Sbjct: 124 T 124
>pdb|2I2X|B Chain B, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|D Chain D, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|F Chain F, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|H Chain H, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|J Chain J, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|L Chain L, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|N Chain N, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
pdb|2I2X|P Chain P, Crystal Structure Of Methanol:cobalamin Methyltransferase
Complex Mtabc From Methanosarcina Barkeri
Length = 258
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 218 GKNIVPGDVLIGLPSSGVHSNGFSLV---RRVLAQSDLS-LKDQLPSENTTLGEALMAPT 273
GKNIV ++ + +NG+++V R V A+ L+ ++ + P T G ALM T
Sbjct: 139 GKNIV---------TALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLT--GTALMTTT 187
Query: 274 VIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQA 333
+ K+V D++ E G+K GG + F G V E++ P + I A
Sbjct: 188 MYAFKEVNDMLLENGIKIPFACGGGAVNQDFVSQFALG---VYGEEAADAPKIADAI-IA 243
Query: 334 GRIEDSEMRRTFN 346
G + +E+R F+
Sbjct: 244 GTTDVTELREKFH 256
>pdb|2YYE|A Chain A, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus Complexed With Ampcpp
pdb|2YYE|B Chain B, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus Complexed With Ampcpp
pdb|2ZOD|A Chain A, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus
pdb|2ZOD|B Chain B, Crystal Structure Of Selenophosphate Synthetase From
Aquifex Aeolicus
Length = 345
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 135 AMSVNDIVTSGAKPL--FFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGET 188
A +++D+ G P+ + F L++++ +VI+G +D +++ VLLGG T
Sbjct: 87 ANALSDVYAMGGIPVNALAISCFNNCELDIEIFREVIRGALDKLREAKTVLLGGHT 142
>pdb|2ZAU|A Chain A, Crystal Structure Of An N-Terminally Truncated
Selenophosphate Synthetase From Aquifex Aeolicus
pdb|2ZAU|B Chain B, Crystal Structure Of An N-Terminally Truncated
Selenophosphate Synthetase From Aquifex Aeolicus
pdb|2ZAU|C Chain C, Crystal Structure Of An N-Terminally Truncated
Selenophosphate Synthetase From Aquifex Aeolicus
Length = 311
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 135 AMSVNDIVTSGAKPL--FFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGET 188
A +++D+ G P+ + F L++++ +VI+G +D +++ VLLGG T
Sbjct: 53 ANALSDVYAMGGIPVNALAISCFNNCELDIEIFREVIRGALDKLREAKTVLLGGHT 108
>pdb|1VQV|A Chain A, Crystal Structure Of Thiamine Monophosphate Kinase (Thil)
From Aquifex Aeolicus
pdb|1VQV|B Chain B, Crystal Structure Of Thiamine Monophosphate Kinase (Thil)
From Aquifex Aeolicus
Length = 306
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 125 IHDTIGIDLVAMSVNDIVTSGAKPLF-FLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVL 183
I + +G ++++V+D++ +G P + + LEV E+ G+ C+ C +
Sbjct: 56 IPEAVGWKAISVNVSDVIANGGLPKWALISLNLPEDLEVSYVERFYIGVKRACEFYKCEV 115
Query: 184 LGGETAE 190
+GG ++
Sbjct: 116 VGGNISK 122
>pdb|3C9R|A Chain A, Aathil Complexed With Atp
pdb|3C9R|B Chain B, Aathil Complexed With Atp
pdb|3C9S|A Chain A, Aathil Complexed With Amppcp
pdb|3C9S|B Chain B, Aathil Complexed With Amppcp
pdb|3C9T|A Chain A, Aathil Complexed With Amppcp And Tmp
pdb|3C9T|B Chain B, Aathil Complexed With Amppcp And Tmp
pdb|3C9U|A Chain A, Aathil Complexed With Adp And Tpp
pdb|3C9U|B Chain B, Aathil Complexed With Adp And Tpp
Length = 342
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 125 IHDTIGIDLVAMSVNDIVTSGAKPLF-FLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVL 183
I + +G ++++V+D++ +G P + + LEV E+ G+ C+ C +
Sbjct: 92 IPEAVGWKAISVNVSDVIANGGLPKWALISLNLPEDLEVSYVERFYIGVKRACEFYKCEV 151
Query: 184 LGGETAE 190
+GG ++
Sbjct: 152 VGGNISK 158
>pdb|3FD5|A Chain A, Crystal Structure Of Human Selenophosphate Synthetase 1
Complex With Ampcp
pdb|3FD5|B Chain B, Crystal Structure Of Human Selenophosphate Synthetase 1
Complex With Ampcp
pdb|3FD6|A Chain A, Crystal Structure Of Human Selenophosphate Synthetase 1
Complex With Adp And Phosphate
pdb|3FD6|B Chain B, Crystal Structure Of Human Selenophosphate Synthetase 1
Complex With Adp And Phosphate
Length = 394
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 17/101 (16%)
Query: 168 VIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVL 227
+I+G D +++ + GG+T P L G A + + + I N VPGDVL
Sbjct: 146 IIQGFKDAAEEAGTSVTGGQTVLNPWIV------LGGVATTVCQPNEFIMPDNAVPGDVL 199
Query: 228 IGLPSSG------VHS-----NGFSLVRRVLAQSDLSLKDQ 257
+ G VH ++ ++ V+ Q D+ L Q
Sbjct: 200 VLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQ 240
>pdb|3U0O|A Chain A, The Crystal Structure Of Selenophosphate Synthetase From
E. Coli
pdb|3U0O|B Chain B, The Crystal Structure Of Selenophosphate Synthetase From
E. Coli
Length = 347
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 28/201 (13%)
Query: 137 SVNDIVTSGAKPLFFLDY--FATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDF 194
+++DI G KP+ + + + L ++A +V +G C+Q+ L GG + + P+
Sbjct: 88 AISDIFAMGGKPIMAIAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPE- 146
Query: 195 YAAGEYDLSGFAV-GIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVLAQSDLS 253
+ G AV GIV + V G L G+ VL ++
Sbjct: 147 ------PIFGLAVTGIVPTERVKKNSTAQAGCKLFLTKPLGIG---------VLTTAE-- 189
Query: 254 LKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVFPKGLG 313
K L E+ L +M I +I GVK + +TG G ++ + +G G
Sbjct: 190 KKSLLKPEHQGLATEVMCRMNIAGASFANI---EGVKAMTDVTGFGLLGHLSEMC-QGAG 245
Query: 314 A---VIYEDSWKVPAVFKWIQ 331
V YE K+P V ++I+
Sbjct: 246 VQARVDYEAIPKLPGVEEYIK 266
>pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 70/187 (37%), Gaps = 32/187 (17%)
Query: 203 SGFAVGIVKKDSVI-DGKNIVPGDVLIGLPSSGV-----------HSNGFSLVR------ 244
G VG+ +KDS + D G + + P G+ H ++ +R
Sbjct: 35 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEGIITNWDDMEKIWHHTFYNELRVAPEEH 94
Query: 245 -RVLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTD 302
+L ++ L+ K + E P + + ++ VL + + G GI +G G T
Sbjct: 95 PTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 154
Query: 303 NIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSH 361
N+P IYE + +P + AGR + D M+ G V +E
Sbjct: 155 NVP----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVR 203
Query: 362 TILEGGC 368
I E C
Sbjct: 204 DIKEKLC 210
>pdb|3SBP|A Chain A, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|B Chain B, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|C Chain C, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|D Chain D, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|E Chain E, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|F Chain F, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|G Chain G, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBP|H Chain H, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form
pdb|3SBQ|A Chain A, Pseudomonas Stutzeri Nitrous Oxide Reductase, P65 Crystal
Form
pdb|3SBQ|B Chain B, Pseudomonas Stutzeri Nitrous Oxide Reductase, P65 Crystal
Form
pdb|3SBR|A Chain A, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|B Chain B, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|C Chain C, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|D Chain D, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|E Chain E, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|F Chain F, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|G Chain G, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
pdb|3SBR|H Chain H, Pseudomonas Stutzeri Nitrous Oxide Reductase, P1 Crystal
Form With Substrate
Length = 638
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 194 FYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVLAQSDLS 253
F AAG+ + + I K + GK P DV++G P G+ + R A + L
Sbjct: 337 FIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLF 396
Query: 254 LKDQLPSENTTLGEALMA---PTVIYVKQVLDIISEGG 288
+ Q+ N + EA+ A V Y+KQ LD+ + G
Sbjct: 397 IDSQVVKWN--MEEAVRAYKGEKVNYIKQKLDVHYQPG 432
>pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 70/187 (37%), Gaps = 32/187 (17%)
Query: 203 SGFAVGIVKKDSVI-DGKNIVPGDVLIGLPSSGV-----------HSNGFSLVR------ 244
G VG+ +KDS + D G + + P G+ H ++ +R
Sbjct: 37 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEGIITNWDDMEKIWHHTFYNELRVAPEEH 96
Query: 245 -RVLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTD 302
+L ++ L+ K + E P + + ++ VL + + G GI +G G T
Sbjct: 97 PTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 156
Query: 303 NIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSH 361
N+P IYE + +P + AGR + D M+ G V +E
Sbjct: 157 NVP----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVR 205
Query: 362 TILEGGC 368
I E C
Sbjct: 206 DIKEKLC 212
>pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Domain 1
pdb|1ESV|A Chain A, Complex Between Latrunculin A:rabbit Muscle Alpha
Actin:human Gelsolin Domain 1
pdb|1MDU|B Chain B, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|1MDU|E Chain E, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|2PBD|A Chain A, Ternary Complex Of Profilin-Actin With The Poly-Pro-Gab
Domain Of Vasp
Length = 377
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 165
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 166 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 214
Query: 364 LEGGC 368
E C
Sbjct: 215 KEKLC 219
>pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
Length = 359
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 88 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 147
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 148 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 196
Query: 364 LEGGC 368
E C
Sbjct: 197 KEKLC 201
>pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1V|B Chain B, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1Z|A Chain A, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|B Chain B, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|C Chain C, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|D Chain D, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|E Chain E, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|F Chain F, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
Length = 376
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 105 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 164
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 165 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 213
Query: 364 LEGGC 368
E C
Sbjct: 214 KEKLC 218
>pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1IJJ|B Chain B, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1P8Z|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Residues Val26-Glu156
pdb|1SQK|A Chain A, Crystal Structure Of Ciboulot In Complex With Skeletal
Actin
pdb|1RGI|A Chain A, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin
pdb|3CJB|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Gelsolin-Segment 1
pdb|3CJC|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Dnase I And Gelsolin-Segment 1
pdb|3B5U|A Chain A, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|B Chain B, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|C Chain C, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|D Chain D, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|E Chain E, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|F Chain F, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|G Chain G, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|H Chain H, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|I Chain I, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|J Chain J, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|K Chain K, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|L Chain L, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|M Chain M, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|N Chain N, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3DAW|A Chain A, Structure Of The Actin-Depolymerizing Factor Homology
Domain In Complex With Actin
pdb|2V51|B Chain B, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V51|D Chain D, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V52|B Chain B, Structure Of Mal-Rpel2 Complexed To G-Actin
pdb|2VYP|A Chain A, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|2VYP|B Chain B, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|3FFK|B Chain B, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|3FFK|E Chain E, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|2YJE|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|D Chain D, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|E Chain E, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|3TU5|A Chain A, Actin Complex With Gelsolin Segment 1 Fused To Cobl
Segment
pdb|4EAH|D Chain D, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|H Chain H, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|G Chain G, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|F Chain F, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
Length = 377
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 106 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 165
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 166 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 214
Query: 364 LEGGC 368
E C
Sbjct: 215 KEKLC 219
>pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form
pdb|2GWK|A Chain A, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
pdb|2GWK|B Chain B, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
Length = 371
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 100 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 159
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 160 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 208
Query: 364 LEGGC 368
E C
Sbjct: 209 KEKLC 213
>pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4:
Implications For Arp23 ACTIVATION
Length = 370
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 99 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 158
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 159 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 207
Query: 364 LEGGC 368
E C
Sbjct: 208 KEKLC 212
>pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
pdb|1LCU|B Chain B, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
Length = 371
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 100 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 159
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 160 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 208
Query: 364 LEGGC 368
E C
Sbjct: 209 KEKLC 213
>pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 364
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 70/187 (37%), Gaps = 32/187 (17%)
Query: 203 SGFAVGIVKKDSVI-DGKNIVPGDVLIGLPSSGV-----------HSNGFSLVR------ 244
G VG+ +KDS + D G + + P G+ H ++ +R
Sbjct: 36 QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEGIITNWDDMEKIWHHTFYNELRVAPEEH 95
Query: 245 -RVLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTD 302
+L ++ L+ K + E P + + ++ VL + + G GI +G G T
Sbjct: 96 PTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 155
Query: 303 NIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSH 361
N+P IYE + +P + AGR + D M+ G V +E
Sbjct: 156 NVP----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVR 204
Query: 362 TILEGGC 368
I E C
Sbjct: 205 DIKEKLC 211
>pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|P Chain P, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Q Chain Q, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|R Chain R, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|S Chain S, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|T Chain T, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|U Chain U, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|V Chain V, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|W Chain W, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|X Chain X, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Y Chain Y, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Z Chain Z, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
Length = 376
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 105 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 164
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 165 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 213
Query: 364 LEGGC 368
E C
Sbjct: 214 KEKLC 218
>pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C
pdb|1QZ6|A Chain A, Structure Of Rabbit Actin In Complex With Jaspisamide A
pdb|1S22|A Chain A, Absolute Stereochemistry Of Ulapualide A
pdb|1Y64|A Chain A, Bni1p Formin Homology 2 Domain Complexed With Atp-actin
pdb|1YXQ|A Chain A, Crystal Structure Of Actin In Complex With Swinholide A
pdb|1YXQ|B Chain B, Crystal Structure Of Actin In Complex With Swinholide A
pdb|2A3Z|A Chain A, Ternary Complex Of The Wh2 Domain Of Wasp With Actin-Dnase
I
pdb|2A40|A Chain A, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A40|D Chain D, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A41|A Chain A, Ternary Complex Of The Wh2 Domain Of Wip With Actin-Dnase
I
pdb|2A42|A Chain A, Actin-Dnase I Complex
pdb|2ASO|A Chain A, Structure Of Rabbit Actin In Complex With Sphinxolide B
pdb|1WUA|A Chain A, The Structure Of Aplyronine A-Actin Complex
pdb|2FXU|A Chain A, X-Ray Structure Of Bistramide A- Actin Complex At 1.35 A
Resolution.
pdb|2D1K|A Chain A, Ternary Complex Of The Wh2 Domain Of Mim With Actin-Dnase
I
pdb|2HMP|A Chain A, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2HMP|B Chain B, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2Q0U|A Chain A, Structure Of Pectenotoxin-2 And Latrunculin B Bound To
Actin
pdb|1J6Z|A Chain A, Uncomplexed Actin
pdb|1LOT|B Chain B, Crystal Structure Of The Complex Of Actin With Vitamin
D-Binding Protein
pdb|1MA9|B Chain B, Crystal Structure Of The Complex Of Human Vitamin D
Binding Protein And Rabbit Muscle Actin
pdb|1NWK|A Chain A, Crystal Structure Of Monomeric Actin In The Atp State
pdb|2Q97|A Chain A, Complex Of Mammalian Actin With Toxofilin From Toxoplasma
Gondii
pdb|2PAV|A Chain A, Ternary Complex Of Profilin-Actin With The Last Poly-Pro
Of Human Vasp
pdb|2VCP|A Chain A, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2VCP|B Chain B, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2ZWH|A Chain A, Model For The F-Actin Structure
pdb|3HBT|A Chain A, The Structure Of Native G-Actin
pdb|3M3N|A Chain A, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M3N|B Chain B, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M1F|A Chain A, Crosslinked Complex Of Actin With First W Domain Of Vibrio
Parahaemolyticus Vopl
pdb|3MFP|A Chain A, Atomic Model Of F-Actin Based On A 6.6 Angstrom Resolution
Cryoem Map
pdb|4A7F|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7N|A Chain A, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|B Chain B, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|C Chain C, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|D Chain D, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|E Chain E, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4H03|B Chain B, Crystal Structure Of Nad+-ia-actin Complex
Length = 375
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 104 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 163
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 164 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 212
Query: 364 LEGGC 368
E C
Sbjct: 213 KEKLC 217
>pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In
Complex With Skeletal Actin
pdb|1M8Q|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1H1V|A Chain A, Gelsolin G4-G6ACTIN COMPLEX
pdb|1RDW|X Chain X, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|A Chain A, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|B Chain B, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|2A5X|A Chain A, Crystal Structure Of A Cross-Linked Actin Dimer
pdb|2ASM|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
A
pdb|2ASP|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
C
pdb|2FF3|B Chain B, Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Motif
Hybrid In Complex With Actin
pdb|2FF6|A Chain A, Crystal Structure Of Gelsolin Domain 1:ciboulot Domain 2
Hybrid In Complex With Actin
pdb|2Q1N|A Chain A, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q1N|B Chain B, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q31|A Chain A, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q31|B Chain B, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q36|A Chain A, Actin Dimer Cross-Linked Between Residues 191 And 374 And
Complexed With Kabiramide C
pdb|2Q0R|A Chain A, Structure Of Pectenotoxin-2 Bound To Actin
pdb|3BUZ|B Chain B, Crystal Structure Of Ia-Btad-Actin Complex
pdb|2Y83|O Chain O, Actin Filament Pointed End
pdb|2Y83|P Chain P, Actin Filament Pointed End
pdb|2Y83|Q Chain Q, Actin Filament Pointed End
pdb|2Y83|R Chain R, Actin Filament Pointed End
pdb|2Y83|S Chain S, Actin Filament Pointed End
pdb|2Y83|T Chain T, Actin Filament Pointed End
pdb|3TPQ|A Chain A, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|B Chain B, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|C Chain C, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|D Chain D, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|E Chain E, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3SJH|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp- Latrunculin A
pdb|3U8X|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U8X|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9Z|A Chain A, Crystal Structure Between Actin And A Protein Construct
Containing The First Beta-Thymosin Domain Of Drosophila
Ciboulot (Residues 2-58) With The Three Mutations
N26dQ27KD28S
pdb|3UE5|A Chain A, Ecp-Cleaved Actin In Complex With Spir Domain D
pdb|4GY2|B Chain B, Crystal Structure Of Apo-ia-actin Complex
pdb|4H0T|B Chain B, Crystal Structure Of Ia-adpr-actin Complex
pdb|4H0V|B Chain B, Crystal Structure Of Nad+-ia(e378s)-actin Complex
pdb|4H0X|B Chain B, Crystal Structure Of Nad+-ia(e380a)-actin Complex
pdb|4H0Y|B Chain B, Crystal Structure Of Nad+-ia(e380s)-actin Complex
Length = 375
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 104 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 163
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 164 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 212
Query: 364 LEGGC 368
E C
Sbjct: 213 KEKLC 217
>pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex
Length = 374
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 103 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 162
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 163 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 211
Query: 364 LEGGC 368
E C
Sbjct: 212 KEKLC 216
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 201 DLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSG-VHSNGFSLVRRVLAQSDLSLKDQLP 259
+L G + IV D+ I+ + V G +L SSG V SNG + + A++ +
Sbjct: 258 ELGGKSPMIVFDDADIE--SAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRR 315
Query: 260 SENTTLGEAL-----MAPTVIYVKQ--VLDIISEGGVKGIAHITGGGFTDNI 304
+E LG+ L + P V +Q VL I +G +G ITGGG +N+
Sbjct: 316 TEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNV 367
>pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|H Chain H, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|J Chain J, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|K Chain K, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|N Chain N, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 99 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 158
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 159 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 207
Query: 364 LEGGC 368
E C
Sbjct: 208 KEKLC 212
>pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex
Length = 373
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 105 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 164
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 165 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 213
Query: 364 LEGGC 368
E C
Sbjct: 214 KEKLC 218
>pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide
pdb|3M6G|B Chain B, Crystal Structure Of Actin In Complex With Lobophorolide
Length = 371
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 104 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 163
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 164 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 212
Query: 364 LEGGC 368
E C
Sbjct: 213 KEKLC 217
>pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 372
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 13/125 (10%)
Query: 246 VLAQSDLSLKDQLPSENTTLGEALMAPTV-IYVKQVLDIISEGGVKGIAHITGGGFTDNI 304
+L ++ L+ K + E P + + ++ VL + + G GI +G G T N+
Sbjct: 104 LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNV 163
Query: 305 PRVFPKGLGAVIYEDSWKVPAVFKWIQQAGR-IEDSEMRRTFNMGIGMVLVVSKETSHTI 363
P IYE + +P + AGR + D M+ G V +E I
Sbjct: 164 P----------IYE-GYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDI 212
Query: 364 LEGGC 368
E C
Sbjct: 213 KEKLC 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,958,437
Number of Sequences: 62578
Number of extensions: 459677
Number of successful extensions: 997
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 963
Number of HSP's gapped (non-prelim): 48
length of query: 388
length of database: 14,973,337
effective HSP length: 101
effective length of query: 287
effective length of database: 8,652,959
effective search space: 2483399233
effective search space used: 2483399233
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)