Query 046037
Match_columns 388
No_of_seqs 359 out of 2532
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 14:01:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046037.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046037hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m84_A Phosphoribosylformylgly 100.0 2.5E-70 8.6E-75 539.9 24.6 326 62-387 3-349 (350)
2 3p4e_A Phosphoribosylformylgly 100.0 6.5E-69 2.2E-73 529.5 21.1 317 64-382 9-339 (349)
3 2btu_A Phosphoribosyl-aminoimi 100.0 9E-66 3.1E-70 507.1 19.4 322 66-387 3-340 (346)
4 2z01_A Phosphoribosylformylgly 100.0 3.3E-65 1.1E-69 503.5 21.8 322 66-387 5-342 (348)
5 3kiz_A Phosphoribosylformylgly 100.0 2E-64 6.9E-69 496.1 21.0 312 65-382 5-375 (394)
6 3mdo_A Putative phosphoribosyl 100.0 7.4E-63 2.5E-67 484.3 19.7 316 65-387 4-380 (389)
7 2v9y_A Phosphoribosylformylgly 100.0 5E-57 1.7E-61 442.6 21.6 297 91-387 9-318 (334)
8 3mcq_A Thiamine-monophosphate 100.0 3.4E-50 1.2E-54 391.8 17.1 273 90-387 22-300 (319)
9 3c9u_A Thiamine monophosphate 100.0 3.7E-49 1.3E-53 387.6 20.0 299 60-386 22-328 (342)
10 3vti_C Hydrogenase maturation 100.0 7.6E-48 2.6E-52 374.5 19.7 268 91-387 18-292 (314)
11 2yxz_A Thiamin-monophosphate k 100.0 1.6E-47 5.6E-52 371.6 21.4 281 78-387 8-298 (311)
12 2rb9_A HYPE protein; hydrogena 100.0 2.5E-47 8.6E-52 373.8 22.3 286 76-387 15-312 (334)
13 2yyd_A Selenide, water dikinas 100.0 3.1E-47 1.1E-51 374.5 21.9 270 91-387 49-344 (345)
14 2zod_A Selenide, water dikinas 100.0 1.5E-46 5.1E-51 370.0 22.2 271 90-387 48-344 (345)
15 2z1u_A Hydrogenase expression/ 100.0 5.2E-47 1.8E-51 372.9 17.6 279 76-381 17-307 (343)
16 2z1e_A Hydrogenase expression/ 100.0 1.4E-45 5E-50 361.9 22.7 269 90-387 38-316 (338)
17 3u0o_A Selenide, water dikinas 100.0 9.1E-46 3.1E-50 364.4 18.9 266 91-382 47-337 (347)
18 3fd5_A Selenide, water dikinas 100.0 4.1E-45 1.4E-49 365.1 20.7 273 91-384 67-364 (394)
19 1vk3_A Phosphoribosylformylgly 100.0 2.1E-37 7.2E-42 325.4 18.7 268 90-387 60-334 (615)
20 3ac6_A Phosphoribosylformylgly 100.0 1.1E-36 3.6E-41 326.2 16.1 270 91-387 64-345 (725)
21 3ac6_A Phosphoribosylformylgly 100.0 3.5E-35 1.2E-39 314.4 19.3 262 91-387 425-697 (725)
22 3ugj_A Phosphoribosylformylgly 99.9 1.7E-26 5.7E-31 256.7 20.3 262 92-387 684-974 (1303)
23 1vk3_A Phosphoribosylformylgly 99.9 5.3E-25 1.8E-29 231.3 9.1 215 90-380 395-614 (615)
24 3ugj_A Phosphoribosylformylgly 99.9 1.1E-22 3.8E-27 226.2 18.3 274 91-387 263-596 (1303)
25 2yrx_A Phosphoribosylglycinami 97.5 3.5E-05 1.2E-09 77.4 2.4 43 13-55 396-441 (451)
26 1ulz_A Pyruvate carboxylase N- 91.4 0.073 2.5E-06 52.9 2.3 36 13-50 383-421 (451)
27 2w70_A Biotin carboxylase; lig 91.4 0.054 1.9E-06 53.8 1.3 36 12-49 382-420 (449)
28 2dzd_A Pyruvate carboxylase; b 91.2 0.091 3.1E-06 52.4 2.8 37 13-51 395-434 (461)
29 1w96_A ACC, acetyl-coenzyme A 89.1 0.16 5.4E-06 52.2 2.5 37 12-49 491-530 (554)
30 2qf7_A Pyruvate carboxylase pr 63.4 2.7 9.1E-05 47.0 2.0 35 13-49 411-448 (1165)
31 3fok_A Uncharacterized protein 43.8 7.6 0.00026 36.5 1.3 48 137-184 133-180 (307)
32 1p9y_A Trigger factor, TF; alp 32.7 25 0.00086 28.0 2.6 43 1-45 4-49 (121)
33 2nsc_A Trigger factor, TF; cha 31.5 22 0.00076 27.8 2.1 43 1-45 1-46 (109)
34 3iv3_A Tagatose 1,6-diphosphat 30.1 13 0.00045 35.4 0.6 51 134-184 112-164 (332)
35 2vpq_A Acetyl-COA carboxylase; 29.2 33 0.0011 33.3 3.4 33 12-44 383-418 (451)
36 2d3o_1 Trigger factor, TF; rib 26.1 28 0.00095 27.3 1.8 42 1-45 1-45 (112)
37 1to3_A Putative aldolase YIHT; 22.7 30 0.001 32.3 1.6 48 136-184 112-159 (304)
38 2hwn_E A kinase binding peptid 22.5 61 0.0021 18.3 2.2 20 127-146 2-21 (26)
39 2kon_A Uncharacterized protein 20.5 25 0.00087 24.8 0.4 40 39-79 13-55 (82)
No 1
>3m84_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha-beta fold, csgid, ATP-binding, nucleotide-BIND purine biosynthesis; HET: MSE AMP TRS; 1.70A {Francisella tularensis subsp} PDB: 3qty_A*
Probab=100.00 E-value=2.5e-70 Score=539.89 Aligned_cols=326 Identities=43% Similarity=0.787 Sum_probs=298.3
Q ss_pred CCCCcccccccccHHhHHHHHHHHHhcC---------CCCCCceEEEecC-------CceEEEEeccCCCccccccccCC
Q 046037 62 TSGGLTYKDSGVDIDAGSELVRRIAKMA---------PGIGGFGGLFPLG-------DSYLVAGTDGVGTKLKLAFETGI 125 (388)
Q Consensus 62 ~~~~~~y~~~gv~~~~~~~~v~~i~~~~---------~~~GdDaavi~~~-------~~~lv~stD~~~~k~~~~~~~~~ 125 (388)
.+.++||++|||||++++++|++|++.+ .++|||||+++++ ++.|+++||++++|+||++.+++
T Consensus 3 ~~~~~~y~~~gv~~~~~~~~v~~i~~~~~~~~~~~v~~giGddaav~~~~~~~~~~~~~~lv~stD~~~~k~~~a~~~~~ 82 (350)
T 3m84_A 3 AMAGLKYEDAGVNIEAGNQAVERMKQHVKKTFTQDVLTGLGSFGSLYSLKNIINNYDDPVLVQSIDGVGTKTKVAVMCGK 82 (350)
T ss_dssp CCTTCCCTTTTCCCCCSCHHHHHHHHHHHTTCCTTEECCCGGGCCEEECHHHHHHCSSEEEEEEEECCTTHHHHHHHHTC
T ss_pred ccccccHHHhCcCHHHHHHHHHHHHHHhhhcCCCCcccCCCCceEEEecCcccccCCCceEEEEcCcCCchHHHHHHhCC
Confidence 3557999999999999999999998753 3799999999986 77899999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhhCChhHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEE
Q 046037 126 HDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGF 205 (388)
Q Consensus 126 ~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~~~~~~~e~~~ei~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t 205 (388)
|+++||++|++|+|||+||||+|++++++++++++++++++++++||.++|+++||+|+||||+++|++|+++.+++++|
T Consensus 83 ~~~iG~~ava~~vsDiaamGA~P~~~l~~l~~~~~~~~~l~~i~~Gi~~~~~~~g~~lvGGdT~~~p~~~~~~~~~l~gt 162 (350)
T 3m84_A 83 FENLGYDLFSAATNDIVVMGAKPITFLDYVAHDKLDPAIMEELVKGMSKACAECGVSLVGGETAEMPGVYQAGEIDMVGV 162 (350)
T ss_dssp CHHHHHHHHHHHHHHHHTTTCEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECTTTBCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhCCeEEeeeeeEcCCcccCCcccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888999999
Q ss_pred EEEEEcCCcccCCCCCCCCCEEEEeCCCchHHHHHHHHHHHH-hccCCccccCCCCc-hhHHHHHhhccchhhHHHHHHH
Q 046037 206 AVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVL-AQSDLSLKDQLPSE-NTTLGEALMAPTVIYVKQVLDI 283 (388)
Q Consensus 206 ~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~~~-~~~~~~~~~~~~~~-~~~~~e~ll~p~~~~~~~~~~l 283 (388)
++|.+++++++++++++|||.|+++|++|.|++|++++|+++ ++.+..+.+.+++. .+.+.+++++|+++|++.++++
T Consensus 163 ~vG~v~~~~~l~~~~a~~GD~Ii~tg~~G~~~~g~~l~r~~~~~~~~~~~~~~~~~~~~~~l~~~ll~p~r~~~~~~~~l 242 (350)
T 3m84_A 163 ITGIVDRKRIINGENIKEGDIVFGLSSSGLHTNGYSFARKLFFDVAGNKHTDTYPELEGKTIGDVLLEPHINYTNIIHDF 242 (350)
T ss_dssp EEEEEEGGGCCCSTTCCTTCEEEEEECSSSTTSSHHHHHHHHHTTSCCCTTCCCGGGTTCCHHHHHTCCCCCCHHHHHHH
T ss_pred EEEEEeCCcccccccCCCCCEEEEecCchHHHHHHHHHHHHhhhhhcCCccccccccchhHHHHHHhhhhhhhHHHHHHH
Confidence 999999989999999999999999999999999999999876 33233333333321 2468999999999999888888
Q ss_pred HH-hCCccEEecCCCChhhhhhhhhcCCCceEEEEcCCCCChHHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHH
Q 046037 284 IS-EGGVKGIAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHT 362 (388)
Q Consensus 284 ~~-~~~v~a~~DIS~GGL~~~L~~~~~s~~g~~I~~~~ip~~~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~ 362 (388)
++ ++.+|+|+|||+|||+.+|+||++|++|++|+.++||+++.++++++.++++|.||+++||+|.||+++|||+++++
T Consensus 243 ~~~~~~v~a~~DiTggGL~~~L~ei~~sgvg~~I~~~~iP~~~~~~~~~~~~~~~~~e~~~~~~~g~gll~~v~~~~~~~ 322 (350)
T 3m84_A 243 LDNGVDIKGMAHITGGGFIENIPRVLPQGLGAQIDKDSFATPAIFKLMQRIGDISEFEMYRSFNMGIGMTIIASQDQFDK 322 (350)
T ss_dssp HHTTCCCCEEEECCTTHHHHHHHHHSCTTCEEEECGGGSCCCHHHHHHHHHHTCCHHHHHHHCCTTEEEEEEECGGGHHH
T ss_pred HhccCCeeEEEeCCCccHHHHHHHHhhhCceEEEEcccCCCcHHHHHHHHhcCCCHHHHHHHHhCCCCEEEEECHHHHHH
Confidence 87 78899999999999999999999899999999999999999999999999999999999999988999999999999
Q ss_pred HHHhcCC-CC-CeEEEEEEEcCCceEE
Q 046037 363 ILEGGCG-TY-EAYHIGEVVNGEGVSY 387 (388)
Q Consensus 363 i~~~l~~-~~-~~~~IG~V~~~~gv~~ 387 (388)
+++.+++ +. ++++||+|+++++|++
T Consensus 323 ~~~~l~~~g~~~a~~IG~V~~~~~v~~ 349 (350)
T 3m84_A 323 MQELAKKHTNTKLYQIGKITNSGKVEI 349 (350)
T ss_dssp HHHHHTTCTTSCEEEEEEEESSSSEEE
T ss_pred HHHHHHhcCCCCeEEEEEEEeCCcEEE
Confidence 9999987 67 9999999999988876
No 2
>3p4e_A Phosphoribosylformylglycinamidine cyclo-ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: AMP CIT; 1.77A {Vibrio cholerae} PDB: 1cli_A
Probab=100.00 E-value=6.5e-69 Score=529.45 Aligned_cols=317 Identities=51% Similarity=0.913 Sum_probs=272.5
Q ss_pred CCcccccccccHHhHHHHHHHHHhcC---------CCCCCceEEEecC----CceEEEEeccCCCccccccccCChhHHH
Q 046037 64 GGLTYKDSGVDIDAGSELVRRIAKMA---------PGIGGFGGLFPLG----DSYLVAGTDGVGTKLKLAFETGIHDTIG 130 (388)
Q Consensus 64 ~~~~y~~~gv~~~~~~~~v~~i~~~~---------~~~GdDaavi~~~----~~~lv~stD~~~~k~~~~~~~~~~~~iG 130 (388)
.++||++|||||++++++|++|++.+ .++|||||+|+++ ++.|+++||++++|+++++.+++|+++|
T Consensus 9 ~~~~y~~~gv~~~~~~~~v~~i~~~~~~t~~~~v~~giGddaav~~~~~~~~~~~lv~~tD~~g~~~~~a~~~~~~~~iG 88 (349)
T 3p4e_A 9 PSLSYKDAGVDIDAGNALVERIKGAVKRTRRPEVMGGLGGFGALCELPTKYKHPVLVSGTDGVGTKLRLALDMKKHDTIG 88 (349)
T ss_dssp ------------CHHHHHHHHHHHHHHHTCCTTEEC------CEECCCTTCSSEEEEEEEECCTHHHHHHHHTTCCSSHH
T ss_pred CCCcHHHhCCCHHHHHHHHHHHHHHhhccCCCCccccCCCCeEEEEccccCCCceEEEEcCCCCcchhHHHhcCCHHHHH
Confidence 47999999999999999999998753 3799999999986 3579999999988877777778899999
Q ss_pred HHHHHHHHHHHhhhCChhHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEE
Q 046037 131 IDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIV 210 (388)
Q Consensus 131 ~~aVa~nvsDIaa~GA~P~~~ld~l~~~~~~~e~~~ei~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v 210 (388)
|++|++|+|||+||||+|++++++++++++++++++++++||.++|+++||+|+||||+++|++|+++.|++++|++|.+
T Consensus 89 ~~aVa~~vsDiaamGA~P~~~l~~l~~~~~~~~~l~~i~~Gi~~~~~~~g~~lvGGdT~~~~~~~~~~~~~l~gt~vG~v 168 (349)
T 3p4e_A 89 IDLVAMCVNDLIVQGAEPLFFLDYYATGKLDVDTAAEVISGIADGCLQAGCALIGGETAEMPGMYEGEDYDVAGFCVGVV 168 (349)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHTCEEEEEEEEECBTTBCTTCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEcceeEECCCcccCCcccEEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999888899999999999
Q ss_pred cCCcccCCCCCCCCCEEEEeCCCchHHHHHHHHHHHHhccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCcc
Q 046037 211 KKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVLAQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVK 290 (388)
Q Consensus 211 ~~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~~~~~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~ 290 (388)
++++++++++++|||.|+++|++|.|++|++++++++++.+..+...++ .+.+.+++++|+++|++.++++++++.++
T Consensus 169 ~~~~~~~~~~a~~GD~Ii~tg~~G~~~~g~~l~~~~~~~~~~~~~~~~~--~~~l~~~ll~p~r~~~~~~~~l~~~~~v~ 246 (349)
T 3p4e_A 169 EKEEIIDGSKVQVGDALIAVGSSGPHSNGYSLVRKILEVSKADKNERLA--GKTIGEHLLAPTKIYIKSGLKLIAEHDIH 246 (349)
T ss_dssp EGGGCCCSTTCCTTCEEEEEECSSSTTSSHHHHHHHHHHHTCCTTCEET--TEEHHHHHHCCCCCCHHHHHHHHHHSCCC
T ss_pred cCcccccCCCCCCCCEEEEcCCcchhhhHHHHHHHHHhhccCCcccccc--hhHHHHHHhhhhHHhHHHHHHHHhcCCce
Confidence 9989999999999999999999999999999998876543322222222 24788999999998988888888888999
Q ss_pred EEecCCCChhhhhhhhhcCCCceEEEEcCCCCChHHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC-
Q 046037 291 GIAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG- 369 (388)
Q Consensus 291 a~~DIS~GGL~~~L~~~~~s~~g~~I~~~~ip~~~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~- 369 (388)
+|+|||+|||+.+|+||++|++|++|+.++||+++.++++++.++++++||+++||+|+||+++||+++++++++.+++
T Consensus 247 a~~DiTggGL~~~L~e~a~sgvg~~Id~~~iP~~~~~~~~~~~~~~~~~e~~~~~~~g~gll~~v~~~~~~~~~~~l~~~ 326 (349)
T 3p4e_A 247 AISHITGGGFWENIPRVLPEGTKAVIDGKSWEWPVIFQWLQEKGNVTTHEMYRTFNCGVGLIIALPKDQANAAVALLQAE 326 (349)
T ss_dssp EEEECCTTHHHHHGGGGCCTTEEEEECTTSCCCCHHHHHHHHHHTCCHHHHHTTSCTTEEEEEEECHHHHHHHHHHHHHT
T ss_pred EEEeCCcchHHHHHHHHhhhCceEEEeccCCCCCHHHHHHHHhcCCCHHHHHHhcCCCCcEEEEEcHHHHHHHHHHHHhc
Confidence 9999999999999999998999999999999999999999999999999999999999999999999999999998876
Q ss_pred CCCeEEEEEEEcC
Q 046037 370 TYEAYHIGEVVNG 382 (388)
Q Consensus 370 ~~~~~~IG~V~~~ 382 (388)
++++++||+|++.
T Consensus 327 g~~a~vIG~V~~~ 339 (349)
T 3p4e_A 327 GETAWVIGEIAAA 339 (349)
T ss_dssp TCCEEEEEEEEEC
T ss_pred CCCeEEEEEEecc
Confidence 6899999999974
No 3
>2btu_A Phosphoribosyl-aminoimidazole synthetase; synthase, PURM, de novo purine biosynthesis, AIR synthase family, spine, FGAR amidotransferase; 2.31A {Bacillus anthracis}
Probab=100.00 E-value=9e-66 Score=507.15 Aligned_cols=322 Identities=53% Similarity=0.903 Sum_probs=277.6
Q ss_pred cccccccccHHhHHHHHHHHHhcC---------CCCCCceEEEecC-----CceEEEEeccCCCccccccccCChhHHHH
Q 046037 66 LTYKDSGVDIDAGSELVRRIAKMA---------PGIGGFGGLFPLG-----DSYLVAGTDGVGTKLKLAFETGIHDTIGI 131 (388)
Q Consensus 66 ~~y~~~gv~~~~~~~~v~~i~~~~---------~~~GdDaavi~~~-----~~~lv~stD~~~~k~~~~~~~~~~~~iG~ 131 (388)
.+|+++|||+++++++|++|++.+ .++|||||+++.+ ++.|+++||++++++||++.+++|+++||
T Consensus 3 ~~y~~~gv~~~~~~~~i~~i~~~~~~~~~~~v~~giGdd~a~~~~~~~~~~~~~lv~~tD~~~~~~~~~~~~~~~~~iG~ 82 (346)
T 2btu_A 3 NAYKQAGVDIEAGYEAVSRMKKHVQTTMRKEVLGGLGGFGGMFDLSKFALEEPVLVSGTDGVGTKLMLAFMADKHDTIGI 82 (346)
T ss_dssp ----------CCC-CCTTTTTTTTGGGCCTTEECC---CCCEEECTTCCCSSEEEEEEEEECCTTHHHHHHHCCCSSHHH
T ss_pred hhHHHhCCCHHHHHHHHHHHHHHHhhccCCCccccccceEEEEecCccCCCCceEEEecccCCchHHHHHHhcCcchHHH
Confidence 489999999999999999998654 2789999999986 67899999999999999999999999999
Q ss_pred HHHHHHHHHHhhhCChhHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEc
Q 046037 132 DLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVK 211 (388)
Q Consensus 132 ~aVa~nvsDIaa~GA~P~~~ld~l~~~~~~~e~~~ei~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~ 211 (388)
++|++|+|||+||||+|++++++++++++++++++++++||.++|+++||+|+||||+++|++|+++++++++|++|.++
T Consensus 83 ~ava~~vsDi~a~Ga~P~~~l~~l~~~~~~~~~l~~i~~Gi~~~~~~~g~~lvGGdt~~~~~~y~~~~~~i~~t~vG~v~ 162 (346)
T 2btu_A 83 DAVAMCVNDIVVQGAEPLFFLDYIACGKAEPSKIENIVKGISEGCRQAGCALIGGETAEMPGMYSTEEYDLAGFTVGIVD 162 (346)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHTCEEEEEEEEECSTTSCSSCEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCeEeeeEEEEcCCcccCCCccEEEEEEEEEc
Confidence 99999999999999999999999998889999999999999999999999999999999999999888899999999999
Q ss_pred CCcccCCCCCCCCCEEEEeCCCchHHHHHHHHHHHHhccC-CccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCcc
Q 046037 212 KDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVLAQSD-LSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVK 290 (388)
Q Consensus 212 ~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~~~~~~~-~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~ 290 (388)
+++++++++++|||.|++++++|.|++|++++++.+...+ .....++++....+.+.+++|+++|.+.++++++++.++
T Consensus 163 ~~~~~~~~~a~~GD~ii~~g~~G~~~~g~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~~l~p~~~~~~~~~~ll~~~~v~ 242 (346)
T 2btu_A 163 KKKIVTGEKIEAGHVLIGLASSGIHSNGYSLVRKVLLEDGELSLDRIYGRLELPLGEELLKPTKIYVKPILELLKNHEVY 242 (346)
T ss_dssp TTSCCCSTTCCTTCEEEEEECSSSTTSCHHHHHHHHHSSCCC----CCSSSCSCHHHHHTCCCCCCHHHHHHHHHHSCCC
T ss_pred cccccCccCCCCCCEEEEECCchhhhhHHHHHHHHHhhccccccCccchhhhhHHHHHHhhHHHHHHHHHHHHHHhCCce
Confidence 9889999999999999999999999999999988654322 111222222235789999999998888777888878899
Q ss_pred EEecCCCChhhhhhhhhcCCCceEEEEcCCCCChHHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC-
Q 046037 291 GIAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG- 369 (388)
Q Consensus 291 a~~DIS~GGL~~~L~~~~~s~~g~~I~~~~ip~~~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~- 369 (388)
+|||||+|||+.+|+||++|++|++|+.++||+++.++++++.++++|.+|+++||+|+||+++|++++++++++.+++
T Consensus 243 a~~DiS~GGL~~~L~ema~s~vg~~I~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~g~gll~~v~~~~~~~~~~~l~~~ 322 (346)
T 2btu_A 243 GMAHITGGGFIENIPRMLPEGIGAEIELGSWKIQPIFSLLQEVGKLEEKEMFNIFNMGIGMVVAVKEEDAKDIVRLLEEQ 322 (346)
T ss_dssp CCEECCTTHHHHHTGGGCCTTEEEEECTTSSCCCHHHHHHHHHHTCCHHHHTTTCCTTEEEEEEECTTTHHHHHHHHHHH
T ss_pred EEEeCCCChHHHHHHHHHhCCeeEEEeecCCCCCHHHHHHHHhcCCCHHHHHHHhCCcCcEEEEEcHHHHHHHHHHHHhC
Confidence 9999999999999999998999999999999999999999999999999999999999999999999999999988876
Q ss_pred CCCeEEEEEEEcCCceEE
Q 046037 370 TYEAYHIGEVVNGEGVSY 387 (388)
Q Consensus 370 ~~~~~~IG~V~~~~gv~~ 387 (388)
+.++++||+|+++++|.+
T Consensus 323 g~~~~~IG~V~~~~~v~~ 340 (346)
T 2btu_A 323 GETARIIGRTVQGAGVTF 340 (346)
T ss_dssp TCCEEEEEEEEESSSEEE
T ss_pred CCCeEEEEEEecCCeEEE
Confidence 689999999998777765
No 4
>2z01_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha and beta proteins, cytoplasm, purine biosynthesis, structural genomics, NPPSFA; 2.20A {Geobacillus kaustophilus}
Probab=100.00 E-value=3.3e-65 Score=503.51 Aligned_cols=322 Identities=51% Similarity=0.886 Sum_probs=264.1
Q ss_pred cccccccccHHhHHHHHHHHHhcC---------CCCCCceEEEecC-----CceEEEEeccCCCccccccccCChhHHHH
Q 046037 66 LTYKDSGVDIDAGSELVRRIAKMA---------PGIGGFGGLFPLG-----DSYLVAGTDGVGTKLKLAFETGIHDTIGI 131 (388)
Q Consensus 66 ~~y~~~gv~~~~~~~~v~~i~~~~---------~~~GdDaavi~~~-----~~~lv~stD~~~~k~~~~~~~~~~~~iG~ 131 (388)
.+|++|||||++|++++++|++.+ .++|||||+++++ ++.|+++||++++|+||++.+++|+++||
T Consensus 5 ~~y~~~gv~~~~g~~~~~~i~~~~~~~~~~~v~~g~GdD~av~~~~~~~~~~~~lv~stD~~~~~~~~~~~~~~~~~iG~ 84 (348)
T 2z01_A 5 KAYKQAGVDIEAGYQAVALMKEHVQKTMRPEVLGGIGGFGGLFDLSALGYRQPVLISGTDGVGTKLKLAFLLDRHDTIGI 84 (348)
T ss_dssp --------------CHHHHHHHHHHHHCCTTEECC-----CEECGGGGCCSSEEEEEEEEECCTHHHHHHHHTCCSSHHH
T ss_pred hhHHHhCccHHHHHHHHHHHHHHHHhhCCCCceeccCCccEEEecCcccCCCcceeeecccccchHHHHHHhCCHHHHHH
Confidence 589999999999999999998754 3799999999975 56799999999999999999999999999
Q ss_pred HHHHHHHHHHhhhCChhHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEc
Q 046037 132 DLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVK 211 (388)
Q Consensus 132 ~aVa~nvsDIaa~GA~P~~~ld~l~~~~~~~e~~~ei~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~ 211 (388)
++|++|+|||+||||+|++++++++++++++++++++++||.++|+++||+|+||||+++|++|+++++++++|++|.++
T Consensus 85 ~ava~~vsDlaa~Ga~P~~~~~~l~~~~~~~~~l~~i~~Gi~~~~~~~g~~lvGGdt~~~~~~y~~~~~~i~~t~vG~v~ 164 (348)
T 2z01_A 85 DCVAMCVNDIIVQGAEPLFFLDYIACGKAVPEKIAAIVKGVADGCVEAGCALIGGETAEMPGMYDEDEYDLAGFAVGVAE 164 (348)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHTCEEEECCEEC--------CEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEECceeeecCCcccCCCeeEEEEEEEEEc
Confidence 99999999999999999999999998889999999999999999999999999999999999998878899999999999
Q ss_pred CCcccCCCCCCCCCEEEEeCCCchHHHHHHHHHHHHhc-cCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCcc
Q 046037 212 KDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVLAQ-SDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVK 290 (388)
Q Consensus 212 ~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~~~~~-~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~ 290 (388)
+++++++++++|||.|++++++|.|++|++++++.+.. .+......++.....+.+.+++|++.|.+.++++++++.++
T Consensus 165 ~~~~l~~~~a~~GD~ii~~g~~G~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~p~~~~~~~~~~l~~~~~v~ 244 (348)
T 2z01_A 165 KERLITGETIQAGDALVGLPSSGLHSNGYSLVRRIVFEQAKLSLDEIYEPLDVPLGEELLKPTRIYAKLLRSVRERFTIK 244 (348)
T ss_dssp GGGCCCSTTCCTTCEEEEEECSSSTTSCHHHHHHHHHTTSCCCTTSCCTTCSSCHHHHHHCCCCCCHHHHHHHHHHSCCC
T ss_pred cccccCccCCCCCCEEEEECCchHHHhHHHHHHHHHhhhccCCcccccccccchHHHHHhhHHHHHHHHHHHHHhcCCce
Confidence 88899999999999999999999999999998876532 12112222211134788999999988888777777778899
Q ss_pred EEecCCCChhhhhhhhhcCCCceEEEEcCCCCChHHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC-
Q 046037 291 GIAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG- 369 (388)
Q Consensus 291 a~~DIS~GGL~~~L~~~~~s~~g~~I~~~~ip~~~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~- 369 (388)
+|||||+|||+.+|+||++|++|++|+.++||+++.++++++.+++++.+|+++||+|++|+++|++++++++++.+++
T Consensus 245 a~~DiSdGGL~~~L~em~~s~vg~~I~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~g~gll~~v~~~~~~~~~~~l~~~ 324 (348)
T 2z01_A 245 GMAHITGGGLIENIPRMLPPGIGARIQLGSWPILPIFDFLREKGSLEEEEMFSVFNMGIGLVLAVSPETAAPLVEWLSER 324 (348)
T ss_dssp EEEECCTTHHHHHHHHHSCTTEEEEEETTSSCCCHHHHHHHHHTTCCHHHHHHHSCTTEEEEEEECHHHHHHHHHHHHHT
T ss_pred EEEeCCCCcHHHHHHHHhccCceEEEeccCCCCCHHHHHHHHcCCCCHHHHHHHhCCCCeEEEEEcHHHHHHHHHHHHhc
Confidence 9999999999999999998999999999999999999999999999999999999999999999999999999988865
Q ss_pred CCCeEEEEEEEcCCceEE
Q 046037 370 TYEAYHIGEVVNGEGVSY 387 (388)
Q Consensus 370 ~~~~~~IG~V~~~~gv~~ 387 (388)
+.++++||+|+++++|.+
T Consensus 325 g~~~~~IG~V~~~~~v~~ 342 (348)
T 2z01_A 325 GEPAYIIGEVAKGAGVSF 342 (348)
T ss_dssp TCCCEEEEEEEESSEEEE
T ss_pred CCCeEEEEEEecCCeEEE
Confidence 688999999998877765
No 5
>3kiz_A Phosphoribosylformylglycinamidine cyclo-ligase; STR genomics, joint center for structural genomics, JCSG; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=2e-64 Score=496.15 Aligned_cols=312 Identities=24% Similarity=0.384 Sum_probs=254.3
Q ss_pred CcccccccccHHhHHHHHHHHHhcCCC--CCCceEEEe-----cCCceEEEEeccCCCcccccccc-------CChhHHH
Q 046037 65 GLTYKDSGVDIDAGSELVRRIAKMAPG--IGGFGGLFP-----LGDSYLVAGTDGVGTKLKLAFET-------GIHDTIG 130 (388)
Q Consensus 65 ~~~y~~~gv~~~~~~~~v~~i~~~~~~--~GdDaavi~-----~~~~~lv~stD~~~~k~~~~~~~-------~~~~~iG 130 (388)
+++|+++|||+++ ++++++|+....| +|.+|.++. ++++.||.+||+++||+.+++.+ +.|+++|
T Consensus 5 ~~~y~~~gv~~~~-~~v~~~~~~~~~g~~~~~~~~~~~~~~~~~~~pvLv~~tDGVGTKl~lA~~~~k~tg~~~~~~tIG 83 (394)
T 3kiz_A 5 SDRYMQRGVSSQK-EDVHKAIKSIDKGIYPRAFCKIIPDILGGDPEYCNIMHADGAGTKSSLAYVYWKETGDISVWKGIA 83 (394)
T ss_dssp ------------------------CCCSCTTSSSCCEECTTTCCTTEEEEEEEEECTTHHHHHHHHHHHHCCTHHHHHHH
T ss_pred cccHHhcCCCCCH-HHHHHHHHHHhcCCCCCcceeecchhhcCCCCceEEEEccCCcHHHHHHHHhhhhcccccchhhhh
Confidence 5899999999999 7999999887643 578888874 56899999999999999999876 5699999
Q ss_pred HHHHHHHHHHHhhhCChhHHHHHHhcCCC----CCHHHHHHHHHHHHHHH---HHcC--CeEecccceeeCCcccCCCcc
Q 046037 131 IDLVAMSVNDIVTSGAKPLFFLDYFATSH----LEVDLAEKVIKGIVDGC---QQSD--CVLLGGETAEMPDFYAAGEYD 201 (388)
Q Consensus 131 ~~aVa~nvsDIaa~GA~P~~~ld~l~~~~----~~~e~~~ei~~Gi~~~c---~~~g--~~lvGGdt~~~p~~~~~~~~~ 201 (388)
+++|+||+|||+||||+|++|+++ +++. .+++++++|++|+.++| +++| |+++||||+++|++|.+ ++
T Consensus 84 ~daVam~VNDIaamGA~Pl~~L~~-a~g~l~~~~~~e~l~~Iv~Gi~e~~~~~~~aGvg~~LVGGeTae~p~l~~~--~~ 160 (394)
T 3kiz_A 84 QDAVIMNIDDLICVGAVDNILLSS-TIGRNKNLIPGEVLAAIINGTEEVLQMLRDNGIGIYSTGGETADVGDLVRT--II 160 (394)
T ss_dssp HHHHHHHHHHHGGGTCCSSEEEEE-EEEECTTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEECTTTBSS--EE
T ss_pred hhheEeeHHHHHhCcCchHHHHHh-hcCcCccCCCHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeeeEcCCcccC--cc
Confidence 999999999999999999999987 5443 45799999999999999 5898 69999999999998875 46
Q ss_pred eEEEEEEEEcCCcccCCCCCCCCCEEEEeCCCc-----------hHHHHHHHHHHHHhcc--------------------
Q 046037 202 LSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSG-----------VHSNGFSLVRRVLAQS-------------------- 250 (388)
Q Consensus 202 ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G-----------~~~~G~sl~~~~~~~~-------------------- 250 (388)
+++|++|++++++++++++++|||.|++++|+| .|+|||||+|+++...
T Consensus 161 i~~t~vGiV~~~~ii~~~~ak~GD~IIgl~SsG~~~~~~~~~~~~HSNG~SLvRk~~~~~~~~~~~~~~~~~~~p~~~~~ 240 (394)
T 3kiz_A 161 VDSTVTCRMKRQDVISNENIKAGNVIVGFASYGQTSYETEYNGGMGSNGLTSARHDVFNNVLASKYPESFDPKVPENLVY 240 (394)
T ss_dssp EEEEEEEEEEGGGCCCGGGCCTTCEEEEEESSBCCTTCSSCBCCCTTSSHHHHHHHHBCTHHHHHCGGGSCTTSCGGGSS
T ss_pred EEEEEEEEEccCcccccccCCCCCEEEEECCcccccccccccCCccchHHHHHHHHHHhhhhhhcccccccccccccccc
Confidence 789999999999999999999999999999999 6999999999965211
Q ss_pred --CCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhC--CccEEecCCCChhhhhhhhhcCCCceEEEEcCCCCChHH
Q 046037 251 --DLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEG--GVKGIAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAV 326 (388)
Q Consensus 251 --~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~--~v~a~~DIS~GGL~~~L~~~~~s~~g~~I~~~~ip~~~~ 326 (388)
+.++.+.++...+++++++|+|+|+|++.++++++.. .||+|+|||+|||.. +.|+++++++ .|+.++||+|++
T Consensus 241 ~~~~~~~~~~~~~~~~lge~LL~PTriY~~~v~~ll~~~~~~I~gmaHITGGGl~~-~~R~lp~~~~-~I~~~~wpvppi 318 (394)
T 3kiz_A 241 SGEMNLTDPYLNVPLDAGKLVLSPTRTYAPLMKEIIHQYKGKLDGVVHCSGGGQTK-VLHFTDATTH-IIKDNLFDVPPL 318 (394)
T ss_dssp CSSBCTTCCCTTCSSCHHHHHHCCCCCCHHHHHHHHHHSTTCCSEEEECCTTGGGG-GGGGCCTTCE-EEECSCCCCCHH
T ss_pred cccccccccccccCCcHHHHHhhHHHHHHHHHHHHHHhhhccceEeeccCccchhh-hhhhcCCccE-EEcCCCCCCCHH
Confidence 1223334444346899999999999999888888764 699999999999997 5588888998 899999999999
Q ss_pred HHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC-CCCeEEEEEEEcC
Q 046037 327 FKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG-TYEAYHIGEVVNG 382 (388)
Q Consensus 327 ~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~ 382 (388)
|+|+++.+++++.||+++||||.||+++|++++++++++.+++ +.++|+||+|+++
T Consensus 319 F~~l~~~G~v~~~EM~rtFNmGiGmVlvV~~e~a~~vl~~L~~~G~~A~iIG~V~~~ 375 (394)
T 3kiz_A 319 FQLIQGQSNTPWEEMYKVFNMGHRLEIYTDAAHAEGMIAIAKKFNIEAKIIGRVEAP 375 (394)
T ss_dssp HHHHHHHHTCCHHHHHHHSCTTEEEEEEECHHHHHHHHHHHHHTTCCEEEEEEEESC
T ss_pred HHHHHHhCCCCHHHHHHhcCCcccEEEEECHHHHHHHHHHHHHcCCCeEEEEEEecC
Confidence 9999999999999999999999999999999999999999876 6899999999976
No 6
>3mdo_A Putative phosphoribosylformylglycinamidine cyclo-; structural genomics, joint center for structural genomics; HET: MSE PGE P6G PG4; 1.91A {Parabacteroides distasonis}
Probab=100.00 E-value=7.4e-63 Score=484.32 Aligned_cols=316 Identities=24% Similarity=0.396 Sum_probs=253.5
Q ss_pred CcccccccccHHhHHHHHHHHHhcCCC--CCCceEEEe-----cCCceEEEEeccCCCcccccccc-------CChhHHH
Q 046037 65 GLTYKDSGVDIDAGSELVRRIAKMAPG--IGGFGGLFP-----LGDSYLVAGTDGVGTKLKLAFET-------GIHDTIG 130 (388)
Q Consensus 65 ~~~y~~~gv~~~~~~~~v~~i~~~~~~--~GdDaavi~-----~~~~~lv~stD~~~~k~~~~~~~-------~~~~~iG 130 (388)
++.|+++|||.++ ++++++|+....| ++.+|.++. ++++.||.+||+++||+.+++.+ +.|+++|
T Consensus 4 ~~~y~~~gv~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~pvLv~~tDGVGTKl~lA~~~~k~~g~~~~~~tIG 82 (389)
T 3mdo_A 4 DQRYNLRGVSASK-EDVHNAIKNIDKGIFPKAFCKIIPDILGGDPEYCNIMHADGAGTKSSLAYMYWKETGDLSVWKGIA 82 (389)
T ss_dssp ----------------------CCSSCSSTTSSSCCEECTTTCCTTEEEEEEEEECTTHHHHHHHHHHHHCCTTHHHHHH
T ss_pred chhhhhcCCCccH-HHHHHHHHHhhcCCCCCcceeecchhhcCCCCceEEEecCCCcHHHHHHHHhhhhccccchHHHHH
Confidence 3789999999999 6899999887654 489999985 56899999999999999999875 5699999
Q ss_pred HHHHHHHHHHHhhhCChhHHHHHHhcCC----CCCHHHHHHHHHHHHHHH---HHcC--CeEecccceeeCCcccCCCcc
Q 046037 131 IDLVAMSVNDIVTSGAKPLFFLDYFATS----HLEVDLAEKVIKGIVDGC---QQSD--CVLLGGETAEMPDFYAAGEYD 201 (388)
Q Consensus 131 ~~aVa~nvsDIaa~GA~P~~~ld~l~~~----~~~~e~~~ei~~Gi~~~c---~~~g--~~lvGGdt~~~p~~~~~~~~~ 201 (388)
|++|+||+|||+||||+|++++++ +++ ..+++++++|++|+.++| +++| |+++||||+++|+++.+ ++
T Consensus 83 ~daVamnVNDIaamGA~Pl~~L~~-a~g~l~~~~~~e~l~~Iv~Gi~e~c~~~~~aGigv~LVGGeTae~p~l~~~--~~ 159 (389)
T 3mdo_A 83 QDALIMNIDDLLCVGAVDNILVSS-TIGRNKLLVPGEVISAIINGTDELLAELREMGVGCYATGGETADVGDLVRT--II 159 (389)
T ss_dssp HHHHHHHHHHHHTTTCCSSEEEEE-EEEECTTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEECTTTBSS--EE
T ss_pred hHheEeeHHHHHhCcCChHHHHHh-hcCcCccCCCHHHHHHHHHHHHHHHHHHHHhCCCcEEeCccceECCCcccC--cc
Confidence 999999999999999999999987 543 246899999999999999 4886 99999999999998765 46
Q ss_pred eEEEEEEEEcCCcccCCCCCCCCCEEEEeCCCc-----------hHHHHHHHHHHHHhcc--------------------
Q 046037 202 LSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSG-----------VHSNGFSLVRRVLAQS-------------------- 250 (388)
Q Consensus 202 ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G-----------~~~~G~sl~~~~~~~~-------------------- 250 (388)
+++|++|++++++++++++++|||.|++++|+| .|+|||||+||++...
T Consensus 160 v~~t~vGiV~~~~ii~~~~ak~GD~IIgl~S~G~~~~~~~~~~~~HSNG~SLvRk~~~~~~~~~~~~~~~~~~~p~~~~~ 239 (389)
T 3mdo_A 160 VDSTVTCRMKRSDVIDNKNIQGGDVIVGLASSGQATYEKEYNGGMGSNGLTSARHDVFSKYLAKKYPESYDAAVPKELVY 239 (389)
T ss_dssp EEEEEEEEEEGGGCCCGGGCCTTCEEEEEESSBCCTTCSSCBCCCCSSSHHHHHHHHBCTHHHHHCGGGSCTTSCTTTTT
T ss_pred EEEEEEEEEccccccccccCCCCCEEEEECCcccccccccccCCccccHHHHHHHHHHhhhhhhcccccccccccccccc
Confidence 789999999999999999999999999999999 5999999999965211
Q ss_pred --CCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhC--CccEEecCCCChhhhhhhhhcCCCceEEEEcCCCCChHH
Q 046037 251 --DLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEG--GVKGIAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVPAV 326 (388)
Q Consensus 251 --~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~--~v~a~~DIS~GGL~~~L~~~~~s~~g~~I~~~~ip~~~~ 326 (388)
+.++.+.+++..+++++++|+|+|+|++.++++++.. .||+|+|||+|||..+++ +. +++ ..|+.+.||+|++
T Consensus 240 ~~~~~~~~~~~~~~~~lge~LL~PTriY~~~v~~ll~~~~~~V~gmaHITGGGl~~~lr-~~-~~~-~~i~~~~wpvppi 316 (389)
T 3mdo_A 240 SGGLKLTDKIEELGIDAGKMVLSPTRTYAPVIKVLLDKLRSQIHGMVHCSGGAQTKVMH-FV-ENK-RVTKDNLFPIPPL 316 (389)
T ss_dssp CSSBCTTCEETTTTEEHHHHHHCCCCCCHHHHHHHHHHHGGGCCEEEECCTTGGGGGGG-GC-SSE-EEEECSCCCCCHH
T ss_pred ccccccccccccCCCcHHHHHhhhHHHHHHHHHHHHHHhhhcceEEeeccCcChhhhhh-hc-CCc-EEecCCCCCCCHH
Confidence 1112233333346899999999999998887777643 699999999999999884 44 466 4888899999999
Q ss_pred HHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC-CCCeEEEEEEEcCCc--eEE
Q 046037 327 FKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG-TYEAYHIGEVVNGEG--VSY 387 (388)
Q Consensus 327 ~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~~g--v~~ 387 (388)
|+|+++.++++++||+++||||+||+++|++++++++++.+++ ++++|+||+|+++.+ |.+
T Consensus 317 F~~l~~~G~v~~~EM~rtFNmGiGmVlvV~~e~a~~vl~~l~~~G~~A~iIG~V~~~~~~~V~l 380 (389)
T 3mdo_A 317 FRTIQEQSGTDWSEMYKVFNMGHRMEIYIAPEHAEEVIGISKSFGIDAQIVGFVEEADKNELII 380 (389)
T ss_dssp HHHHHHHHCCCHHHHHHHSCTTEEEEEEECGGGHHHHHHHHHHTTCCEEEEEEEEECSSCEEEE
T ss_pred HHHHHHhcCCCHHHHHHhccCcceEEEEECHHHHHHHHHHHHHcCCCeEEEEEEEeCCCCeEEE
Confidence 9999999999999999999999999999999999999999876 689999999997753 543
No 7
>2v9y_A Phosphoribosylformylglycinamidine cyclo-ligase; multifunctional enzyme, structural genomics consortium, nucleotide-binding, purine biosynthesis; 2.10A {Homo sapiens}
Probab=100.00 E-value=5e-57 Score=442.58 Aligned_cols=297 Identities=52% Similarity=0.924 Sum_probs=261.0
Q ss_pred CCCCceEEEecC-----CceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHHHHhcCCCCCHHHH
Q 046037 91 GIGGFGGLFPLG-----DSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLA 165 (388)
Q Consensus 91 ~~GdDaavi~~~-----~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~~~~~~~e~~ 165 (388)
.+|.|+++|+++ ++.++.++|+.++++||++.++.++++||++|++|+|||+||||+|++++++|++++.+++++
T Consensus 9 ~~g~f~~~~~~~~~~~~~~~l~~~~D~~v~~~~~a~~~d~~~~iG~~ava~~vsDiaamGA~P~~~l~~l~~~~~~~~~l 88 (334)
T 2v9y_A 9 DLGGFAGLFDLKAAGFKDPLLASGTDGVGTKLKIAQLCNKHDTIGQDLVAMCVNDILAQGAEPLFFLDYFSCGKLDLSVT 88 (334)
T ss_dssp ------CCCCTTTTTCSSEEEEEEEECCTTHHHHHHHHTCCTTHHHHHHHHHHHHHHTTTCEEEEEEEEEEESSCCHHHH
T ss_pred cCcccceeeecccccCCCceEEeecCcCCcchhhheecCCHHHHHHHHHHHHHHHHHHCCCcHHHHHHHhcCCCCCHHHH
Confidence 579999999875 678999999999999999999989999999999999999999999999999999888999999
Q ss_pred HHHHHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEcCCcccCC-CCCCCCCEEEEeCCCchHHHHHHHHH
Q 046037 166 EKVIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDG-KNIVPGDVLIGLPSSGVHSNGFSLVR 244 (388)
Q Consensus 166 ~ei~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~~~~~l~~-~~a~~GD~Ii~~g~~G~~~~G~sl~~ 244 (388)
+++++||.++|+++||+++||||+++|++|+++++++++|++|.+++++++++ ++++|||.|+++|++|.|++|+++++
T Consensus 89 ~~i~~Gi~~~~~~~g~~lvGGdT~~~~~~y~~~~~~i~~t~vG~v~~~~~~~~~~~a~~GD~Ii~~g~~G~~~~g~~~~~ 168 (334)
T 2v9y_A 89 EAVVAGIAKACGKAGCALLGGETAEMPDMYPPGEYDLAGFAVGAMERDQKLPHLERITEGDVVVGIASSGLHSNGFSLVR 168 (334)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEEEECTTTSCTTCEEEEEEEEEEEEGGGCSCCGGGCCTTCEEEEEECSSSTTSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCeEEeEEeEEcCCcccCCceeEEEEEEEEEccccccccccCCCCCCEEEEECCccHHHHHHHHHH
Confidence 99999999999999999999999999999988888999999999998889999 99999999999999999999999988
Q ss_pred HHHhccCCccccCCCCc--hhHHHHHhhccchhhHHHHHHHHHhCCccEEecCCCChhhhhhhhhcCCCceEEEEcCCCC
Q 046037 245 RVLAQSDLSLKDQLPSE--NTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVFPKGLGAVIYEDSWK 322 (388)
Q Consensus 245 ~~~~~~~~~~~~~~~~~--~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~~~s~~g~~I~~~~ip 322 (388)
+.+.+.+..+.+.++++ ...+.+.+++|+++|.+.++++++++.+++|+|||+|||+.+|+||++|++|++|+.++||
T Consensus 169 ~~~~~~~~~~~~~~~~d~~~~~l~~~~~~p~~~~~~~~~~l~~~~~v~a~~DiS~GGL~~~L~ema~s~vg~~I~~~~iP 248 (334)
T 2v9y_A 169 KIVAKSSLQYSSPAPDGCGDQTLGDLLLTPTRIYSHSLLPVLRSGHVKAFAHITGGGLLENIPRVLPEKLGVDLDAQTWR 248 (334)
T ss_dssp HHHHHSSCCTTSBCCTTSCSSBHHHHHTCCCCCCHHHHHHHHHTTCCCEEEECCTTHHHHHSGGGSCTTEEEEEEGGGSC
T ss_pred hHhhhccCccccccccccchhHHHHHHhhhhHHHHHHHHHHHhhCCceEEEeCCCCcHHHHHHHHhhcCeEEEEecccCC
Confidence 76532222222233321 1367899999998888888888877789999999999999999999988999999999999
Q ss_pred ChHHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC-CCCeEEEEEEEcC----CceEE
Q 046037 323 VPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG-TYEAYHIGEVVNG----EGVSY 387 (388)
Q Consensus 323 ~~~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~----~gv~~ 387 (388)
+++.++++++.++++|++|+++||+|.+|+++|+|++++++++.+++ +.++++||+|+++ ++|.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~g~gll~~v~~~~~~~~~~~l~~~g~~~~~IG~V~~~~~~~~~V~~ 318 (334)
T 2v9y_A 249 IPRVFSWLQQEGHLSEEEMARTFNCGVGAVLVVSKEQTEQILRGIQQHKEEAWVIGSVVARAEGSPRVKV 318 (334)
T ss_dssp CCHHHHHHHHHHTCCHHHHHHHCCTTEEEEEEECGGGHHHHHHHHHHTTCCEEEEEEEEEC----CCEEE
T ss_pred CcHHHHHHHHhcCCCHHHHHHHhCCCCCEEEEECHHHHHHHHHHHHhcCCCeEEEEEEeccCCCCCeEEE
Confidence 99999999999999999998899999889999999999999988865 6899999999875 46654
No 8
>3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus}
Probab=100.00 E-value=3.4e-50 Score=391.84 Aligned_cols=273 Identities=18% Similarity=0.202 Sum_probs=231.2
Q ss_pred CCCCCceEEEecC-CceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHHHHhcCCCCCHHHHHHH
Q 046037 90 PGIGGFGGLFPLG-DSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKV 168 (388)
Q Consensus 90 ~~~GdDaavi~~~-~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~~~~~~~e~~~ei 168 (388)
.++||||||++++ +..|++|||++++++||.+.+ +|+++||++|++|+|||+||||+|+++++++++++.++++++++
T Consensus 22 ~g~GdDaavi~~~~~~~lv~ttD~~~~~~hf~~~~-~p~~~G~~ava~~lsDiaamGa~P~~~l~~l~~p~~~~~~l~~i 100 (319)
T 3mcq_A 22 LGVGDDAALIQPSPGMELAVSADMLVANTHFYPNI-DPWLIGWKSLAVNISDMAAMGAQPRWATLTIALPEADEDWISKF 100 (319)
T ss_dssp TCCCGGGGCCCCCTTCEEEEEEEEEECCTTSCCCS-CHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEESSCCHHHHHHH
T ss_pred cCCCCCEEEEeeCCCCeEEEEecccCcccCCCCCC-CHHHHHHHHHHHHHHHHHHcCCchHHhEEEEECCCCCHHHHHHH
Confidence 4799999999986 678999999999999997665 89999999999999999999999999999999778889999999
Q ss_pred HHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEcCCcccCCCCCCCCCEEEEeCCCchHHHHHHHHHHHHh
Q 046037 169 IKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVLA 248 (388)
Q Consensus 169 ~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~~~~ 248 (388)
++||.++|+++||+|+||||++.| +++++|++|.+++++++++++++|||.|+++|++|.|++|+.++++.+
T Consensus 101 ~~Gi~~~~~~~g~~lvGGdt~~~~-------~~i~~t~iG~v~~~~~~~~~~a~~GD~ii~tg~~G~~~~g~~~~~~~~- 172 (319)
T 3mcq_A 101 AAGFFACAAQFDIALIGGDTTRGP-------LTISVQIMGETPPGASLLRSTARADDDIWVSGPLGDAALALAAIQGRY- 172 (319)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEESS-------CEEEEEEEEEECTTCCCCSSCCCTTEEEEECSCCSHHHHHHHHHTTSS-
T ss_pred HHHHHHHHHHcCCeEEeeEcCCCC-------eEEEEEEEEeeCCCcccccCCCCCCCEEEEECCccHHHHHHHHHhcCC-
Confidence 999999999999999999999742 578999999999888999999999999999999999999988765421
Q ss_pred ccCCccccCCCC-chhHHHHHhhccchhhHHHHHHHHHhCCccEEecCCCChhhhhhhhhc-CCCceEEEEcCCCCChHH
Q 046037 249 QSDLSLKDQLPS-ENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVF-PKGLGAVIYEDSWKVPAV 326 (388)
Q Consensus 249 ~~~~~~~~~~~~-~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~~-~s~~g~~I~~~~ip~~~~ 326 (388)
. ++. ....+.+.+++|++ +++.... ++ +.+++|+|||+ ||+.+|+||+ .|++|++|+.++||+++.
T Consensus 173 ----~----~~~~~~~~~~~~~~~p~~-~~~~~~~-l~-~~v~a~~DiS~-GL~~~L~e~a~~s~vg~~i~~~~iP~~~~ 240 (319)
T 3mcq_A 173 ----P----LSDTELAACGKALHQPQP-RVVLGQA-LR-GLAHSALDISD-GLLADLGHILEHSQVGAEVWLKAIPKSEV 240 (319)
T ss_dssp ----C----CCHHHHHHHHHHHHCCCC-CHHHHHH-TT-TTEEEEEECSS-CHHHHHHHHHHHHTCEEEEEGGGSCCCHH
T ss_pred ----C----CChHHHHHHHHHHhCCCc-cHHHHHH-Hh-ccCcEEEEccH-hHHHHHHHHHHHcCCcEEEeecccCCCHH
Confidence 1 111 12356788899875 4443332 33 57999999999 7999999999 589999999999999999
Q ss_pred HHHHHHhCCCCHHHHHhhcCCC--eeEEEEEecccHHHHHHhcCC-CCCeEEEEEEEcCCceEE
Q 046037 327 FKWIQQAGRIEDSEMRRTFNMG--IGMVLVVSKETSHTILEGGCG-TYEAYHIGEVVNGEGVSY 387 (388)
Q Consensus 327 ~~~i~~~~~~~~~e~~~~f~~G--~gll~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~~gv~~ 387 (388)
+.++++.++ +.++ .+++| ++|+++||+++++++++.+++ +.++++||+|++++++.+
T Consensus 241 ~~~~~~~~~--~~~~--~l~~G~d~~ll~~v~~~~~~~~~~~l~~~g~~~~~IG~V~~~~~~~~ 300 (319)
T 3mcq_A 241 VSAHSQEVA--IQKM--ILSGGDDYELCFTASTQHRQQIADIGRQLSLDMAVIGRITDTQQLVI 300 (319)
T ss_dssp HHHTTTSHH--HHHH--HHHCSCCCCEEEEEEGGGHHHHHHHHHHTTCCCEEEEEEESSCCEEE
T ss_pred HHHHHhcCC--HHHH--HHcCCCceeEEEEEcHHHHHHHHHHHHHcCCCcEEEEEEEeCCceEE
Confidence 988876543 3444 34555 479999999999999998876 689999999999887653
No 9
>3c9u_A Thiamine monophosphate kinase; beta barrel, alpha-beta structure, transferase; HET: TPP ADP; 1.48A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 3c9r_A* 3c9t_A* 3c9s_A* 1vqv_A
Probab=100.00 E-value=3.7e-49 Score=387.61 Aligned_cols=299 Identities=18% Similarity=0.206 Sum_probs=237.3
Q ss_pred CCCCCCcccccccccHHh----HHHHHHHHHhcCC-C-CCCceEEEecCCceEEEEeccCCCccccccccCChhHHHHHH
Q 046037 60 SSTSGGLTYKDSGVDIDA----GSELVRRIAKMAP-G-IGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHDTIGIDL 133 (388)
Q Consensus 60 ~~~~~~~~y~~~gv~~~~----~~~~v~~i~~~~~-~-~GdDaavi~~~~~~lv~stD~~~~k~~~~~~~~~~~~iG~~a 133 (388)
..--+...|++++++..- .+++++++.+.++ . +||||||++++++.|++|||+++++.||.+.++ |+++||++
T Consensus 22 ~~~~~~~~~~~~~~~m~~~~~~e~~li~~~~~~~~~~~~GdDaAvi~~~~~~lv~ttD~~~~~~~f~~~~~-p~~iG~~a 100 (342)
T 3c9u_A 22 AAVLEENLYFQGSFTMRLKELGEFGLIDLIKKTLESKVIGDDTAPVEYCSKKLLLTTDVLNEGVHFLRSYI-PEAVGWKA 100 (342)
T ss_dssp -------------CCCBHHHHCHHHHHHHHHHHHTCSSTTSSSEEEEETTEEEEEEEEEEEBTTTBCTTSC-HHHHHHHH
T ss_pred HHHHHhhHHhhcccccccccCCHHHHHHHHHHhcCCCCCCCceEEEecCCCeEEEEeCccCCCcccCCCCC-HHHHHHHH
Confidence 333446789999999543 7788988865432 2 299999999988889999999999999988766 89999999
Q ss_pred HHHHHHHHhhhCChhHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEcC
Q 046037 134 VAMSVNDIVTSGAKPLFFLDYFATS-HLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKK 212 (388)
Q Consensus 134 Va~nvsDIaa~GA~P~~~ld~l~~~-~~~~e~~~ei~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~~ 212 (388)
|++|+|||+||||+|++++++|+++ +++.++++++++||.++|+++||+|+||||++++ ++++++|++|. +
T Consensus 101 va~~vsDlaamGA~P~~~l~~l~~p~~~~~~~l~~i~~Gi~~~~~~~gv~lvGGdT~~~~------~~~i~vt~vG~--~ 172 (342)
T 3c9u_A 101 ISVNVSDVIANGGLPKWALISLNLPEDLEVSYVERFYIGVKRACEFYKCEVVGGNISKSE------KIGISVFLVGE--T 172 (342)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEEEECTTSBHHHHHHHHHHHHHHHHHHTCEEEEEEEEECS------SCEEEEEEEEE--E
T ss_pred HHHHHHHHHHCCCchHHhEEEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEeeEeeecC------CeEEEEEEEEe--c
Confidence 9999999999999999999999865 6889999999999999999999999999999863 46789999998 4
Q ss_pred CcccCCCCCCCCCEEEEeCCCchHHHHHHHHHHHHhccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCccEE
Q 046037 213 DSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVLAQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGI 292 (388)
Q Consensus 213 ~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~~~~~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~ 292 (388)
++++++++++|||.|+++|++|.|++|++++++. ... .+.....+.+.+++|.+.+.. .+. ++ +.+++|
T Consensus 173 ~~~l~~~~a~~GD~IivtG~~G~~~~g~~~l~~~----~~~----~~~~~~~~~~~~~~p~~~~~~-~~~-~~-~~v~a~ 241 (342)
T 3c9u_A 173 ERFVGRDGARLGDSVFVSGTLGDSRAGLELLLME----KEE----YEPFELALIQRHLRPTARIDY-VKH-IQ-KYANAS 241 (342)
T ss_dssp SSCCCSSCCCTTCEEEEESCSSHHHHHHHHHHTT----CSC----CCHHHHHHHHHHHSCCCCGGG-HHH-HH-HHCSEE
T ss_pred CccccccCCCCCCEEEEECchhHHHHHHHHHhcC----Ccc----cccccHHHHHHHhCchhhHHH-HHH-hh-ccCeEE
Confidence 5788999999999999999999999999887631 111 111123567888999876542 222 22 348999
Q ss_pred ecCCCChhhhhhhhhc-CCCceEEEEcCCCCChHHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCCCC
Q 046037 293 AHITGGGFTDNIPRVF-PKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCGTY 371 (388)
Q Consensus 293 ~DIS~GGL~~~L~~~~-~s~~g~~I~~~~ip~~~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~~~ 371 (388)
+|||+ ||+.+|+||+ +|++|++|+.++||+++.+.++++.++++|.++....+++++||++||+++.++ ++
T Consensus 242 ~DiSd-GL~~~L~eia~~sgvg~~Id~~~iP~~~~~~~~~~~~~~~~~~~~~~GGEd~~ll~~v~~~~~~~----l~--- 313 (342)
T 3c9u_A 242 MDISD-GLVADANHLAQRSGVKIEILSEKLPLSNELKMYCEKYGKNPIEYALFGGEDYQLLFTHPKERWNP----FL--- 313 (342)
T ss_dssp EEESS-CHHHHHHHHHHHHTCEEEECGGGSCCCHHHHHHHHHTTCCHHHHHHHCCCCCEEEEEECGGGCCT----TS---
T ss_pred EECCc-hHHHHHHHHHHHhCCeEEEehhcCCCCHHHHHHHHHcCCCHHHHHhcCCCceEEEEEECHHHHhh----cC---
Confidence 99999 8999999999 689999999999999999999999999999887544456688999999987433 22
Q ss_pred CeEEEEEEEcCCceE
Q 046037 372 EAYHIGEVVNGEGVS 386 (388)
Q Consensus 372 ~~~~IG~V~~~~gv~ 386 (388)
.+++||+|++++++.
T Consensus 314 ~~~~IG~V~~~~~v~ 328 (342)
T 3c9u_A 314 DMTEIGRVEEGEGVF 328 (342)
T ss_dssp CEEEEEEEESSSSEE
T ss_pred CCEEEEEEEcCCCEe
Confidence 389999999877654
No 10
>3vti_C Hydrogenase maturation factor; transferase, carbamoyltransfer, maturation of [NIFE]-hydroge nitrIle synthesis, iron; 2.56A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=7.6e-48 Score=374.51 Aligned_cols=268 Identities=22% Similarity=0.260 Sum_probs=222.1
Q ss_pred CCCCceEEEecCCceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHHHHhc-CCCCCHHHHHHHH
Q 046037 91 GIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFA-TSHLEVDLAEKVI 169 (388)
Q Consensus 91 ~~GdDaavi~~~~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~-~~~~~~e~~~ei~ 169 (388)
++|||||+++ ..+++|||.+....||. +++++||++|++|+|||+||||+|++++++++ |++++.+++++++
T Consensus 18 ~~gdDaav~~---~~l~~t~D~~v~~~~~~----~~~~iG~~ava~~~sDiaamGA~P~~~~~~l~~p~~~~~~~l~~i~ 90 (314)
T 3vti_C 18 RAMEDAALLF---GNITLTTDSFTVKPLFF----PGGDIGKLAVCGTVNDASMRGAKPLFLTAAFIIEEGFPVEDLKKIV 90 (314)
T ss_dssp HHTCSSEEET---TTEEEEEEEECCSSSEE----TTEEHHHHHHHHHHHHTTTTTEEEEEEEEEEEEETTCCHHHHHHHH
T ss_pred CCCCCeEEec---CceEEEecCCccCCccc----CccHHHHHHHHHHHHHHHHcCCccceeEEEEEcCCCCCHHHHHHHH
Confidence 6799999998 47999999998888874 35799999999999999999999999999886 5678899999999
Q ss_pred HHHHHHHHHcCCeEecccceeeCC-cccCCCcceEEEEEEEEcCCcccCCCCCCCCCEEEEeCCCchHHHHHHHHHHHHh
Q 046037 170 KGIVDGCQQSDCVLLGGETAEMPD-FYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVLA 248 (388)
Q Consensus 170 ~Gi~~~c~~~g~~lvGGdt~~~p~-~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~~~~ 248 (388)
+||.++|+++||+++||||+.+|. -| +.+.+++|++|.+++++++++++++|||.|+++|++|.|++|+.+.++.
T Consensus 91 ~Gi~~~~~~~g~~lvGGdt~~~~~g~~--~~~~i~~t~vG~v~~~~~~~~~~a~~GD~i~~tg~~G~~~~~~~~~~~~-- 166 (314)
T 3vti_C 91 KSMAEAAKEAGVKIVAGDTKVVEKGSV--DRIFINTSGIGVLYEGANVSIKNAKPGDIVLISGTIGDHGMAVMSAREE-- 166 (314)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEECTTSB--SSEEEEEEEEEEECTTCCCCTTCCCTTCEEEESSCSSHHHHHHHHHHTT--
T ss_pred HHHHHHHHHcCCeEEeeeeEEccCCCc--CCeEEEEEEEEEECCCccccccCCCCCCEEEEECChHHHHHHHHHhhcC--
Confidence 999999999999999999999872 12 1356889999999998899999999999999999999999988765431
Q ss_pred ccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHh-CCccEEecCCCChhhhhhhhhc-CCCceEEEEcCCCCChHH
Q 046037 249 QSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISE-GGVKGIAHITGGGFTDNIPRVF-PKGLGAVIYEDSWKVPAV 326 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~-~~v~a~~DIS~GGL~~~L~~~~-~s~~g~~I~~~~ip~~~~ 326 (388)
..+...+.. ..+|...+.+ .+++. +.+++|||||+|||+.+|+||+ +|++|++|+.++||+++.
T Consensus 167 ---~~~~~~~~~--------~~~~~~~~~~---~l~~~~~~v~a~~DiS~GGL~~~L~e~a~~sgvg~~I~~~~iP~~~~ 232 (314)
T 3vti_C 167 ---LQFDTPIFS--------DVAPLNGLIE---KLMTLGEAIKVLRDPTRGGVAEVLYEISKMSGVGIKIYEEKLPVKES 232 (314)
T ss_dssp ---CCCSSCCCC--------CCCCCHHHHH---HHGGGGGGEEEEECCCTTHHHHHHHHHHHHHTCEEEEEGGGCCCCHH
T ss_pred ---CCcchhhHH--------hhccHHHHHH---HHHhccCCcEEEEeCCCcHHHHHHHHHHHHcCCeEEEehhcCCCCHH
Confidence 112112211 1233332322 33333 5799999999999999999998 689999999999999999
Q ss_pred HHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcC--C-CCCeEEEEEEEcCCceEE
Q 046037 327 FKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGC--G-TYEAYHIGEVVNGEGVSY 387 (388)
Q Consensus 327 ~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~--~-~~~~~~IG~V~~~~gv~~ 387 (388)
++++++.++++|. .+||+| +|+++|++++++++++.++ + +.++++||+|....+|++
T Consensus 233 ~~~~~~~~~~~~l---~~~~~g-~ll~~v~~~~~~~~~~~l~~~~~g~~~~~IG~v~~~~~v~l 292 (314)
T 3vti_C 233 VKSACEFMGIDFL---HLANEG-KVVVVVERDYAEKALEIMKSHEYGKDAEIIGEVNDSKLVTI 292 (314)
T ss_dssp HHHHHHHHTCCGG---GSCCSS-CCEEEECGGGHHHHHHHHHTSTTCTTCEEEEEEESSSCEEE
T ss_pred HHHHHHHhCCCHH---HHHhCC-cEEEEECHHHHHHHHHHHhhCcCCCCeEEEEEECCCCeEEE
Confidence 9999999999984 468998 8999999999999999887 4 689999999943335654
No 11
>2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=1.6e-47 Score=371.63 Aligned_cols=281 Identities=19% Similarity=0.177 Sum_probs=233.8
Q ss_pred HHHHHHHHHhcC-------CCCCCceEEEecCCceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHH
Q 046037 78 GSELVRRIAKMA-------PGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLF 150 (388)
Q Consensus 78 ~~~~v~~i~~~~-------~~~GdDaavi~~~~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~ 150 (388)
++++++++++ . .++||||||+++++..+++|||++++++||.. +.+|+++||++|++|+|||+||||+|++
T Consensus 8 e~~li~~i~~-~~~~~~~~~g~gdDaavi~~~~~~lv~ttD~~~~~~~f~~-~~~p~~~G~~ava~~lsDlaa~Ga~P~~ 85 (311)
T 2yxz_A 8 ERALLARLAP-LGYPPEAPLPPGDDAGGVWAEGRAWLLKTDGFLYREVALK-GMGPFEVGFRGVAATASDLLAKMGRPLG 85 (311)
T ss_dssp HHHHHHHHTT-TTCCTTCSSCTTSSSEEEEETTEEEEEEEEEEEHHHHCCT-TCCHHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHh-cCCCCCcccCCCCCEEEEecCCCeEEEEeCcCCCccccCC-CCCHHHHHHHHHHHHHHHHHHcCChhhh
Confidence 5678888875 3 37899999999977789999999999999985 5679999999999999999999999999
Q ss_pred HHHHhc-CCCCCHHHHHHHHHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEcCCcccCCCCCCCCCEEEE
Q 046037 151 FLDYFA-TSHLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIG 229 (388)
Q Consensus 151 ~ld~l~-~~~~~~e~~~ei~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~ 229 (388)
+++++. |.+++.++++++++||.++|+++||+|+||||++++ ++++++| |.+++.+.++ +++++||.|++
T Consensus 86 ~~~~~~~p~~~~~~~l~~~~~Gi~~~~~~~g~~lvGG~t~~~~------~~~i~~t--G~v~~~~~~~-~~a~~GD~i~~ 156 (311)
T 2yxz_A 86 FTLGLFLPEDLEEGFVLELVRGAAEAAKRLGAFLLGGDTNRGV------EVALTVS--GYALAEAPLP-RKALPGDLLYL 156 (311)
T ss_dssp EEEEEEECTTCBHHHHHHHHHHHHHHHHHTTCEEEEEEEEECS------SCEEEEE--EEEEESSCCC-SCCCTTCEEEE
T ss_pred heeeEeCCCCCCHHHHHHHHHHHHHHHHHcCCeEEceecCCCC------CcEEEEE--eeeCCCCccc-cCCCCCCEEEE
Confidence 999887 556889999999999999999999999999999865 2346665 9998877888 88999999999
Q ss_pred eC-CCchHHHHHHHHHHHHhccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCccEEecCCCChhhhhhhhhc
Q 046037 230 LP-SSGVHSNGFSLVRRVLAQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVF 308 (388)
Q Consensus 230 ~g-~~G~~~~G~sl~~~~~~~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~~ 308 (388)
+| ++|.|++++.++++.+ + . .. ...+.+.++.|++.+. .+++++.+++|||||+ ||+.+|+||+
T Consensus 157 ~g~~~G~~~~~~~~~~~~~---~--~--~~---~~~~~~~~~~p~~~~~----~~l~~~~v~a~~DiSd-GL~~~l~ema 221 (311)
T 2yxz_A 157 AGDRWGRTGAAIRAHYEGR---S--L--EG---FPKIREAAFYPLPRLE----LLALSGLLRGSLDSSD-GLAETLWQLA 221 (311)
T ss_dssp ESSCTTHHHHHHHHHHHTC---C--C--TT---CHHHHHHHHCCCCCGG----GGGGTTTCSEEEEESS-CHHHHHHHHH
T ss_pred eCCCcchHHHHHHHHhcCC---C--c--ch---hHHHHHHHhCchhhHH----HHHHhcCCEEEEeChH-HHHHHHHHHH
Confidence 99 9999999887765422 1 1 11 2356778888886443 3455567899999998 8999999998
Q ss_pred CCCceEEEEcCCCCChHHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC-CCCeEEEEEEEcCCceEE
Q 046037 309 PKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG-TYEAYHIGEVVNGEGVSY 387 (388)
Q Consensus 309 ~s~~g~~I~~~~ip~~~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~~gv~~ 387 (388)
.|++|++|+ ++|+++.+.++++.++ ++.++....+++++|+++|++++++++++.+++ +.++++||+|++++++.+
T Consensus 222 ~s~~g~~i~--~ip~~~~~~~~~~~~~-~~~~~~l~~g~~~~ll~~v~~~~~~~~~~~l~~~g~~~~~IG~v~~~~~v~i 298 (311)
T 2yxz_A 222 DLGVGVEVE--ALPLYPDVLAFAGSEE-AALELVLYGGEEFEAVLVVPQEGAAAVEARAKAKGLPLFRAGRVVAGEGVYL 298 (311)
T ss_dssp TTTCEEEEC--CCCCCHHHHHHHSSHH-HHHHHHHSCCCCCEEEEEECSTTHHHHHHHHHHTTCCEEEEEEEESSSCEEE
T ss_pred HcCCcEEEE--eccCCHHHHHHHHccC-CHHHHHhhcCCCeEEEEEECHHHHHHHHHHHHhcCCCeEEEEEEEcCCceEE
Confidence 889999998 8999999999987765 677654222234679999999999999988865 588999999998877754
No 12
>2rb9_A HYPE protein; hydrogenase maturation, dimer, enzyme, X- RAY crystallography, structural genomics, BSGI; 2.00A {Escherichia coli O157} PDB: 2i6r_A
Probab=100.00 E-value=2.5e-47 Score=373.84 Aligned_cols=286 Identities=19% Similarity=0.211 Sum_probs=232.0
Q ss_pred HhHHHHHHHH-HhcCCCCCCceEEEecC-----CceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhH
Q 046037 76 DAGSELVRRI-AKMAPGIGGFGGLFPLG-----DSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPL 149 (388)
Q Consensus 76 ~~~~~~v~~i-~~~~~~~GdDaavi~~~-----~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~ 149 (388)
+..++++.+. +....++|||||+++++ +..+++++|.++...||. +++++||++|++|+|||+||||+|+
T Consensus 15 ~~~~~~i~~~~~~~~l~~gdDaavi~~~~~~~~~~~l~~t~D~~~~dp~~~----~~~~iG~~ava~~lsDlaamGA~P~ 90 (334)
T 2rb9_A 15 QLINSLFMEAFANPWLAEQEDQARLDLAQLVAEGDRLAFSTDSYVIDPLFF----PGGNIGKLAICGTANDVAVSGAIPR 90 (334)
T ss_dssp HHHHHHHHHHHCCTTTTTCCSSEEEEHHHHHHHCSEEEEEEEEECCSSSEE----TTEEHHHHHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHhcCccccCCCCceEEEecCcccCCCceEEEEecCcccCCccC----CcccHHHHHHHHHHHHHHHCCCchH
Confidence 3445555443 23345899999999986 568999999998777764 3458999999999999999999999
Q ss_pred HHHHHhcC-CCCCHHHHHHHHHHHHHHHHHcCCeEecccceeeC-CcccCCCcceEEEEEEEEcCCcccCCCCCCCCCEE
Q 046037 150 FFLDYFAT-SHLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMP-DFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVL 227 (388)
Q Consensus 150 ~~ld~l~~-~~~~~e~~~ei~~Gi~~~c~~~g~~lvGGdt~~~p-~~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~I 227 (388)
+++++|++ +++++++++++++||.++|+++||+++||||+.+| +-+ ..+.+++|++|.+++++++++++++|||.|
T Consensus 91 ~~~~~l~~p~~~~~~~l~~i~~Gi~~~~~~~g~~lvGGdt~~~~~g~~--~~~~i~~t~vG~v~~~~~~~~~~a~~GD~I 168 (334)
T 2rb9_A 91 YLSCGFILEEGLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAA--DKLFINTAGMGAIPTNIHWGAQTLTAGDIL 168 (334)
T ss_dssp EEEEEEEEETTCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSB--SSEEEEEEEEEEECTTCCCCGGGCCTTCEE
T ss_pred HhEEEEecCCCCCHHHHHHHHHHHHHHHHHcCCEEEeeEeEEccCCCC--CceEEEEEEEEEECcccccccccCCCCCEE
Confidence 99999985 67889999999999999999999999999999886 211 135689999999998888999999999999
Q ss_pred EEeCCCchHHHHHHHHHHHHhccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCccEEecCCCChhhhhhhhh
Q 046037 228 IGLPSSGVHSNGFSLVRRVLAQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRV 307 (388)
Q Consensus 228 i~~g~~G~~~~G~sl~~~~~~~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~ 307 (388)
+++|++|.|++|+.++++.+ .+...+. ...+|.. +.+..++++..+++|+|||+|||+.+|+||
T Consensus 169 ivtg~~G~~g~~~~~~~~~~-----~~~~~~~--------~~~~~l~---~~~~~l~~~~~v~a~~Dis~GGL~~~l~em 232 (334)
T 2rb9_A 169 LVSGTLGDHGATILNLREQL-----GLDGELV--------SDCAVLT---PLIQTLRDIPGVKALRDATRGGVNAVVHEF 232 (334)
T ss_dssp EESSCSSHHHHHHHHHHHTC-----SCTTTCC--------CCCCCCH---HHHHTTTTCTTEEEEEECCTTHHHHHHHHH
T ss_pred EEECCchHHHHHHHHhhccC-----CCChHHH--------HhhhhhH---HHHHHHHhcCCeEEEEECCCccHHHHHHHH
Confidence 99999999999887766422 1111111 1122322 122334445679999999999999999999
Q ss_pred c-CCCceEEEEcCCCCChHHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC---CCCeEEEEEEEcCC
Q 046037 308 F-PKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG---TYEAYHIGEVVNGE 383 (388)
Q Consensus 308 ~-~s~~g~~I~~~~ip~~~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~---~~~~~~IG~V~~~~ 383 (388)
+ +|++|++|+.++||+++.++++++.++++|. .+|++| +|+++|++++++++++.+++ +.++++||+|++++
T Consensus 233 a~~s~vg~~i~~~~iP~~~~~~~~~~~~~~~~~---~~~~~G-~ll~~v~~~~~~~~~~~l~~~~~g~~~~~IG~v~~~~ 308 (334)
T 2rb9_A 233 AAACGCGIEISESALPVKPAVRGVCELLGLDAL---NFANEG-KLVIAVERNAAEQVLAALHSHPLGKDAALIGEVVERK 308 (334)
T ss_dssp HHHHTCEEEEETTTCCCCHHHHHHHHHHCCCTT---TSCCSS-CEEEEECGGGHHHHHHHHHTSGGGTTCEEEEEEESSC
T ss_pred HHHcCCeEEEeccCCCCCHHHHHHHHHcCCCHH---HHhhcC-eEEEEEChHHHHHHHHHHhhcCCCCCEEEEEEEEeCC
Confidence 9 6899999999999999999999999899984 458888 59999999999999988865 58899999999877
Q ss_pred ceEE
Q 046037 384 GVSY 387 (388)
Q Consensus 384 gv~~ 387 (388)
++.+
T Consensus 309 ~v~~ 312 (334)
T 2rb9_A 309 GVRL 312 (334)
T ss_dssp SEEE
T ss_pred cEEE
Confidence 7654
No 13
>2yyd_A Selenide, water dikinase; FULL-length selenophosphate synthetase, structural genomics, NPPSFA; 1.98A {Aquifex aeolicus} PDB: 2yye_A* 2zod_A 2zau_A
Probab=100.00 E-value=3.1e-47 Score=374.45 Aligned_cols=270 Identities=19% Similarity=0.200 Sum_probs=218.4
Q ss_pred CCCCceEEEecCCceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHHHHhcCCC--CCHHHHHHH
Q 046037 91 GIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSH--LEVDLAEKV 168 (388)
Q Consensus 91 ~~GdDaavi~~~~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~~~~--~~~e~~~ei 168 (388)
++||||||+++++..+++|||++. +.+.+|+++||++|++|+|||+||||+|++++++|++++ .++++++++
T Consensus 49 g~GdDaAvi~~~~~~lv~ttD~~~------~~~~~p~~~G~~ava~~lsDlaamGa~P~~~l~~l~~p~~~~~~~~l~~i 122 (345)
T 2yyd_A 49 SIGDDAGVYEHNGIIWVYTVDIIT------PVVNDPYLWGAISTANALSDVYAMGGIPVNALAISCFNNCELDIEIFREV 122 (345)
T ss_dssp ----CCCEEEETTEEEEEEEEEEC------CSSSCHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECTTTCCHHHHHHH
T ss_pred cCCCCeEEEEECCCeEEEEeCCCC------CccCCHHHHHHHHHHHHHHHHHHcCCchHHHheeEeCCCCCCCHHHHHHH
Confidence 789999999998656999999974 235678999999999999999999999999999998665 689999999
Q ss_pred HHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEcCCcccCCCCCCCCCEEEEeCCCchHHHHHHHHHHHHh
Q 046037 169 IKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVLA 248 (388)
Q Consensus 169 ~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~~~~ 248 (388)
++||.++|+++||+|+||||+.+|+ +.+++|++|.+++++++++++++|||.|+++|++|.+..++.+.++.+
T Consensus 123 ~~Gi~~~~~~~gv~lvGGdt~~~~~------~~i~~t~vG~v~~~~~~~~~~a~~GD~Iivtg~lG~~~~~~~~~~~~~- 195 (345)
T 2yyd_A 123 IRGALDKLREAKTVLLGGHTIDDKE------PKFGLSVAGICPEGKYITQSGAQVGQLLILTKPIGTGILIKGLKEGIL- 195 (345)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEECSS------CEEEEEEEEECGGGCCCCSSCCCTTCEEEECSCBCHHHHHHHHHTTSS-
T ss_pred HHHHHHHHHHcCCEEEeeEcccCCC------ceEEEEEEEEEcCCceecCCCCCCCCEEEEECCCcHHHHHHHHHhcCC-
Confidence 9999999999999999999998763 468889999999888999999999999999999997655544322110
Q ss_pred ccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCccEEecCCCChhhhhhhhhcC-CCceEEEEcCCCCChHHH
Q 046037 249 QSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVFP-KGLGAVIYEDSWKVPAVF 327 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~~~-s~~g~~I~~~~ip~~~~~ 327 (388)
. ++......+.+.+|.+ ....+++++.+++|+|||+|||+.+|+||+. |++|++|+.++||+++.+
T Consensus 196 ------~---~~~~~~~~~~~~~~~~----~~~~~~~~~~v~a~~DiS~gGL~~~L~e~a~~sgvg~~I~~~~iPi~~~~ 262 (345)
T 2yyd_A 196 ------K---EEDINEAIENMLALND----KARNLMLSLDATACTDVTGFGLLGHAWNICKNSNIGARIFFEKVPYYQLS 262 (345)
T ss_dssp ------C---GGGGHHHHHHHHSCSH----HHHHHHHHTTCSEEEECCTTHHHHHHHHHHHHHTCEEEECGGGSCBCHHH
T ss_pred ------C---HHHHHHHHHHHhcccH----HHHHHHHhcCCeEEEECCCcHHHHHHHHHHHHcCCcEEEEhhcCCCCHHH
Confidence 0 1112344556666653 2345566678999999999999999999995 899999999999999999
Q ss_pred HHHHHhCCC------------------CH-HHHHhhc---CCCeeEEEEEecccHHHHHHhcCC-CCCeEEEEEEEcCCc
Q 046037 328 KWIQQAGRI------------------ED-SEMRRTF---NMGIGMVLVVSKETSHTILEGGCG-TYEAYHIGEVVNGEG 384 (388)
Q Consensus 328 ~~i~~~~~~------------------~~-~e~~~~f---~~G~gll~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~~g 384 (388)
+++|+.+.+ ++ +++..+| ++| +|+++||+++++++++.+++ ++++++||+|+++++
T Consensus 263 ~~~~~~~~~~~~~~~n~~~~~~~l~~~~~~~~~~llfdp~tsG-gll~~v~~~~~~~~~~~l~~~g~~a~vIG~v~~~~~ 341 (345)
T 2yyd_A 263 ENLVKKKIYPKGAIENLNFVKNYLKSNLDNWKLILLSDPVTSG-GLLFTINKEKLEKIDETAKELEVNYWIIGETIAENV 341 (345)
T ss_dssp HHHHHTTCCCHHHHHHHHHHTTTEECCCCHHHHHHHHSCCSSC-CEEEEECGGGGGTHHHHHHHHTCCCEEEEEEESSSS
T ss_pred HHHHHcCCCCcchhhhHHHHHhhccccCHHHHHhhccCcccCc-eEEEEEcHHHHHHHHHHHHHcCCCEEEEEEEeeCCc
Confidence 999987533 22 2221345 455 79999999999999998876 689999999999988
Q ss_pred eEE
Q 046037 385 VSY 387 (388)
Q Consensus 385 v~~ 387 (388)
+++
T Consensus 342 ~~~ 344 (345)
T 2yyd_A 342 LEV 344 (345)
T ss_dssp EEE
T ss_pred eee
Confidence 875
No 14
>2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A
Probab=100.00 E-value=1.5e-46 Score=369.96 Aligned_cols=271 Identities=18% Similarity=0.213 Sum_probs=219.2
Q ss_pred CCCCCceEEEecCCceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHHHHhcCC--CCCHHHHHH
Q 046037 90 PGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATS--HLEVDLAEK 167 (388)
Q Consensus 90 ~~~GdDaavi~~~~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~~~--~~~~e~~~e 167 (388)
.++||||||++.++..+|+|||.+.+.+|+ |+++||++|++|+|||+||||+|+++++++.++ ..+.+++++
T Consensus 48 ~g~GDDaAvi~~~~~~lv~ttD~~~~~v~~------P~~~G~~Av~~~lsDiaAmGa~P~~~l~~l~~p~~~~~~~~l~~ 121 (345)
T 2zod_A 48 VSIGDDAGVYEHNGIIWVYTVDIITPVVND------PYLWGAISTANALSDVYAMGGIPVNALAISCFNNCELDIEIFRE 121 (345)
T ss_dssp -----CCCEEEETTEEEEEEEEEECCSSSC------HHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECTTTCCHHHHHH
T ss_pred cCCCCCeEEEecCCcEEEEEecCCCCcccC------HHHHHHHHHHHHHHHHHHcCCCchhhhhhhhcCCCcCCHHHHHH
Confidence 389999999999888999999999877764 679999999999999999999999999877644 467899999
Q ss_pred HHHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEcCCcccCCCCCCCCCEEEEeCCCchHHHHHHHHHHHH
Q 046037 168 VIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVL 247 (388)
Q Consensus 168 i~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~~~ 247 (388)
+++||.++|+++|++++||||...+ .+.+++|++|.+++++++++++++|||.|++++++|.+..+..+.+...
T Consensus 122 ~~~Gi~~~~~~~gv~lvGGdt~~~~------~~~i~~t~~G~~~~~~~~~~~~a~~GD~iivtg~lG~~~~~~~~~~~~~ 195 (345)
T 2zod_A 122 VIRGALDKLREAKTVLLGGHTIDDK------EPKFGLSVAGICPEGKYITQSGAQVGQLLILTKPIGTGILIKGLKEGIL 195 (345)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEECS------SCEEEEEEEEECGGGCCCCSSCCCTTCEEEECSCBCHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHhccCcccCCceEECC------cCcccceeEEEecCccccccccCCCCCeEEEcCCCcchhHHHHHhhccc
Confidence 9999999999999999999999865 3467889999999999999999999999999999998876554432211
Q ss_pred hccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCccEEecCCCChhhhhhhhhc-CCCceEEEEcCCCCChHH
Q 046037 248 AQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVF-PKGLGAVIYEDSWKVPAV 326 (388)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~~-~s~~g~~I~~~~ip~~~~ 326 (388)
. .+......+.+..+.+ ....++....+++|+|+|+|||+.+|+||+ .|++|++|+.+++|+++.
T Consensus 196 ~----------~~~~~~~~~~~~~~~~----~~~~~~~~~~v~a~~Dit~~GL~~~L~eia~~S~vg~~I~~~~iP~~~~ 261 (345)
T 2zod_A 196 K----------EEDINEAIENMLALND----KARNLMLSLDATACTDVTGFGLLGHAWNICKNSNIGARIFFEKVPYYQL 261 (345)
T ss_dssp C----------GGGGHHHHHHHHSCSH----HHHHHHHHTTCSEEEECCTTHHHHHHHHHHHHHTCEEEECGGGSCBCHH
T ss_pred c----------chhhhhhHHhhhccch----hHhhhhcccccceeeccccchHHHHHHHHHhccCCCeEeeccccCcCHH
Confidence 0 0111233444444443 233445557899999999999999999999 589999999999999999
Q ss_pred HHHHHHh-------------------CCCCHHHHHhhc---CCCeeEEEEEecccHHHHHHhcCC-CCCeEEEEEEEcCC
Q 046037 327 FKWIQQA-------------------GRIEDSEMRRTF---NMGIGMVLVVSKETSHTILEGGCG-TYEAYHIGEVVNGE 383 (388)
Q Consensus 327 ~~~i~~~-------------------~~~~~~e~~~~f---~~G~gll~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~~ 383 (388)
++++++. .+.+++++..+| ++| ||||+||+++++++++.+++ +.++++||+|++++
T Consensus 262 ~~~~~~~g~~p~~~~~n~~~~~~~~~~~~~~~~~~ll~DpqTSG-GLL~tv~~~~~~~~~~~l~~~g~~a~~IG~V~~~~ 340 (345)
T 2zod_A 262 SENLVKKKIYPKGAIENLNFVKNYLKSNLDNWKLILLSDPVTSG-GLLFTINKEKLEKIDETAKELEVNYWIIGETIAEN 340 (345)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHTTTEECCCCHHHHHHHHCCCSSC-CEEEEECGGGGGTHHHHHHHHTCCCEEEEEEESSS
T ss_pred HHHHHHcCCCchhhHHHHHHHHHHhhcCCCHHHHHhccCccccC-cEEEEEcHHHHHHHHHHHHHcCCCeEEEEEEEcCC
Confidence 9888874 345666665555 345 69999999999999998877 68999999999999
Q ss_pred ceEE
Q 046037 384 GVSY 387 (388)
Q Consensus 384 gv~~ 387 (388)
++++
T Consensus 341 ~~~V 344 (345)
T 2zod_A 341 VLEV 344 (345)
T ss_dssp SEEE
T ss_pred CCEE
Confidence 9876
No 15
>2z1u_A Hydrogenase expression/formation protein HYPE; alpha-beta fold, beta barrel, lyase; HET: ATP; 2.00A {Desulfovibrio vulgaris subsp} PDB: 2z1t_A*
Probab=100.00 E-value=5.2e-47 Score=372.94 Aligned_cols=279 Identities=19% Similarity=0.200 Sum_probs=229.1
Q ss_pred HhHHHHHHHHHh-cC----CCCCCceEEEecCCceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHH
Q 046037 76 DAGSELVRRIAK-MA----PGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLF 150 (388)
Q Consensus 76 ~~~~~~v~~i~~-~~----~~~GdDaavi~~~~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~ 150 (388)
+...++++++.. .. .++||||||+++++ .|++|||+++++.||. +++++||++|++|+|||+||||+|++
T Consensus 17 k~~~~~i~~~~~~~~~~~~~~~GdDaav~~~~~-~lv~ttD~~~~~p~~~----~~~~iG~~ava~~lsDlaamGA~P~~ 91 (343)
T 2z1u_A 17 RASHRLISDLFLRHFDNPILGTLNDAARLDLTG-PLAMSTDSYTVDPIFF----PGGDIGTLAVHGTVNDVSMLGARPRY 91 (343)
T ss_dssp HHHHHHHHHTHHHHHCCHHHHTCSSSCCCCCCS-SEEEEEEEECCSSSEE----TTEEHHHHHHHHHHHHHHTTTEEEEE
T ss_pred cCcHHHHHHHHHhhcCCcCCCCCCceEEEECCC-eEEEEeCCCCcCCeec----CCccHHHHHHHHHHHHHHHcCCeeHH
Confidence 555667766532 21 37899999999987 9999999999998874 45699999999999999999999999
Q ss_pred HHHHhcCC-CCCHHHHHHHHHHHHHHHHHcCCeEecccceeeC-CcccCCCcceEEEEEEEEcCCcccCCCCCCCCCEEE
Q 046037 151 FLDYFATS-HLEVDLAEKVIKGIVDGCQQSDCVLLGGETAEMP-DFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLI 228 (388)
Q Consensus 151 ~ld~l~~~-~~~~e~~~ei~~Gi~~~c~~~g~~lvGGdt~~~p-~~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii 228 (388)
++++|+++ ++++++++++++||.++|+++|++++||||+.+| +.+. .+++++|++|.+++++++++++++|||.|+
T Consensus 92 ~~~~l~~p~~~~~~~l~~i~~Gi~~~~~~~g~~lvGGdt~~~~~g~~~--~~~i~~t~vG~v~~~~~~~~~~a~~GD~I~ 169 (343)
T 2z1u_A 92 LSCGFILEEGLDMDILERVVASMGKAAREAGVFIVTGDTKVVPRGACD--KMFINTTGIGEILVDPAPSGDRARPGDAIL 169 (343)
T ss_dssp EEEEEEEETTCCHHHHHHHHHHHHHHHHHHTCEEEEEEEEEECTTSSS--SEEEEEEEEEEECCSSCCCGGGCCTTCEEE
T ss_pred hheeeecCCCCCHHHHHHHHHHHHHHHHHhCCEEECcEEEEcCCCCCC--CeEEEEEEEEEECCCccccccCCCCCCEEE
Confidence 99999854 7889999999999999999999999999999987 3332 467999999999988889999999999999
Q ss_pred EeCCCchHHHHHHHHHHHHhccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHh-CCccEEecCCCChhhhhhhhh
Q 046037 229 GLPSSGVHSNGFSLVRRVLAQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISE-GGVKGIAHITGGGFTDNIPRV 307 (388)
Q Consensus 229 ~~g~~G~~~~G~sl~~~~~~~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~-~~v~a~~DIS~GGL~~~L~~~ 307 (388)
++|++|.|++++.+.++.+ .+...+. ...+|...+++ .+++. +.+++|+|||+|||+.+|+||
T Consensus 170 vtg~~G~~g~~~~~~~~~~-----~~~~~~~--------~~~~~~~~~~~---~~~~~~~~v~a~~Dis~GGL~~~L~e~ 233 (343)
T 2z1u_A 170 ISGSMGDHGLTILSQRQGL-----NFAADVC--------SDSASLNRVVE---KLVLEVGDIHVLRDPTRGGLATTLNEI 233 (343)
T ss_dssp ECSCSSHHHHHHHHHTTTC-----CCCTTCC--------CCCCCCHHHHH---HHHHHTCCCCEEECCCTTHHHHHHHHH
T ss_pred EECCccHHHHHHHHHhccc-----CcchHHH--------HhhhhHHHHHH---HHHhccCCceEEEeCCCchHHHHHHHH
Confidence 9999999988877654311 1111111 11223222222 23333 679999999999999999999
Q ss_pred c-CCCceEEEEcCCCCChHHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC---CCCeEEEEEEEc
Q 046037 308 F-PKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG---TYEAYHIGEVVN 381 (388)
Q Consensus 308 ~-~s~~g~~I~~~~ip~~~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~---~~~~~~IG~V~~ 381 (388)
+ +|++|++|+.++||+++.++++++.+++++ +.+|++| +|++++++++++++++.+++ +.++++||+|++
T Consensus 234 a~~s~vg~~I~~~~iP~~~~~~~~~~~~~~~~---~~~~~~G-~ll~~v~~~~~~~~~~~l~~~~~g~~~~~IG~v~~ 307 (343)
T 2z1u_A 234 AGQSQAVCHVLETAVPVRESVRNGCSFLGLDP---LYLANEG-KLICILPEERAEAALAVLREGPHGEHAARIGSVKS 307 (343)
T ss_dssp HHHHTSEEEEEGGGSCCCHHHHHHHHHTTCCT---TSSCCSS-CCEEEECHHHHHHHHHHHHTSTTGGGCEEEEEEEC
T ss_pred HHhCCceEEEecCCCCCCHHHHHHHHhcCCCH---HHHhccc-eEEEEECHHHHHHHHHHHhhccCCCCeEEEEEEEe
Confidence 9 589999999999999999999999888888 4568888 79999999999999988864 478999999998
No 16
>2z1e_A Hydrogenase expression/formation protein HYPE; [NIFE] hydrogenase maturation, ATPase, transferase; 1.55A {Thermococcus kodakarensis} SCOP: d.79.4.1 d.139.1.1 PDB: 2z1f_A
Probab=100.00 E-value=1.4e-45 Score=361.86 Aligned_cols=269 Identities=21% Similarity=0.267 Sum_probs=220.4
Q ss_pred CCCCCceEEEecCCceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHHHHhcCC-CCCHHHHHHH
Q 046037 90 PGIGGFGGLFPLGDSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATS-HLEVDLAEKV 168 (388)
Q Consensus 90 ~~~GdDaavi~~~~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~~~-~~~~e~~~ei 168 (388)
.++||||||+++++..|++|||+++++.||. +++++||++|++|+|||+||||+|++++++++++ +.+.++++++
T Consensus 38 ~~~gdDaav~~~~~~~lv~ttD~~~~~~~~~----~~~~iG~~ava~~lsDl~a~Ga~P~~~~~~l~~p~~~~~~~l~~~ 113 (338)
T 2z1e_A 38 LDALDDGATIPFGDKHIVFTIDGHTVKPLFF----PGGDIGRLAVSGTVNDLAVMGAEPIALANSMIIGEGLDMEVLKRV 113 (338)
T ss_dssp ---CCSCEEEEETTEEEEEEEEEECCSSSEE----TTEEHHHHHHHHHHHHHHTTTCEEEEEEEEEEEETTCCHHHHHHH
T ss_pred cCCCCceEEEEeCCCEEEEEeCCCccCcccc----CCccHHHHHHHHHHHHHHHcCCchhHhEEEEecCCCCCHHHHHHH
Confidence 4789999999998778999999999988873 2458999999999999999999999999999864 6789999999
Q ss_pred HHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEcCCcccCCCCCCCCCEEEEeCCCchHHHHHHHHHHHHh
Q 046037 169 IKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVLA 248 (388)
Q Consensus 169 ~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~~~~ 248 (388)
++|+.++|+++|++++||||+.+|. ..++.+++|++|.+++. . ++++++|||.|+++|++|.|++++.+.++.+
T Consensus 114 ~~Gi~~~~~~~g~~lvGGdt~~~~~---~~~~~i~~t~~G~v~~~-~-~~~~a~~GD~i~vtg~~G~~g~~~~~~~~~~- 187 (338)
T 2z1e_A 114 LKSMDETAREVPVPIVTGDTKVVED---KIEMFVITAGIGIAEHP-V-SDAGAKVGDAVLVSGTIGDHGIALMSHREGI- 187 (338)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEESS---SCCEEEEEEEEEEESSC-C-CTTCCCTTCEEEESSCSSHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHcCCEEECcEEEEcCC---CCceEEEEEEEEEECCc-c-CccCCCCCCEEEEECCccHHHHHHHhhhccC-
Confidence 9999999999999999999999873 12578899999999876 3 8899999999999999999998877654321
Q ss_pred ccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHH-h-C-CccEEecCCCChhhhhhhhhc-CCCceEEEEcCCCCCh
Q 046037 249 QSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIIS-E-G-GVKGIAHITGGGFTDNIPRVF-PKGLGAVIYEDSWKVP 324 (388)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~-~-~-~v~a~~DIS~GGL~~~L~~~~-~s~~g~~I~~~~ip~~ 324 (388)
.+...+. ..++|.. +.+.++++ . . .+++|||||+|||+.+|+||+ +|++|++|+.++||++
T Consensus 188 ----~~~~~~~--------~~~~~~~---~~~~~l~~~~~~~~v~a~~Dis~GGL~~~l~ema~~s~~g~~I~~~~iP~~ 252 (338)
T 2z1e_A 188 ----AFETELK--------SDVAPIW---DVVKAVAETIGWENIHAMKDPTRAGLSNALNEIARKSNVGILVREADIPIR 252 (338)
T ss_dssp ----CCSSCCC--------CCCCCCH---HHHHHHHHHHCGGGEEEEECCCTTHHHHHHHHHHHHHTCEEEEEGGGSCCC
T ss_pred ----CCChhHH--------HhhhhHH---HHHHHHHHhcccCceEEEEeCCCChHHHHHHHHHHhcCCeEEEEcccCCCC
Confidence 1111111 1112221 12233343 3 3 699999999999999999999 6899999999999999
Q ss_pred HHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC---CCCeEEEEEEEcCC-c-eEE
Q 046037 325 AVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG---TYEAYHIGEVVNGE-G-VSY 387 (388)
Q Consensus 325 ~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~---~~~~~~IG~V~~~~-g-v~~ 387 (388)
+.+.++++.+++++ +.+||+| +|+++|++++++++++.+++ +.++++||+|++++ + +.+
T Consensus 253 ~~~~~~~~~~~~~~---l~~~~~G-~ll~~v~~~~~~~~~~~l~~~~~g~~~~~IG~v~~~~~~~v~i 316 (338)
T 2z1e_A 253 PEVRAASEMLGISP---YDVANEG-KVVMVVAREYAEEALEAMRKTEKGRNAAIIGEVIADYRGKVLL 316 (338)
T ss_dssp HHHHHHHHHHTCCG---GGSCCSS-CCEEEECGGGHHHHHHHHHTSSTTTTCEEEEEEESSSTTCEEE
T ss_pred HHHHHHHHHcCCCh---hhccCCc-eEEEEECHHHHHHHHHHHHhccCCCCeEEEEEEEeCCCCeEEE
Confidence 99999999888888 4568998 79999999999999998875 57899999999876 3 543
No 17
>3u0o_A Selenide, water dikinase; ATP binding protein, selenophosphate synthesis, transferase; 2.25A {Escherichia coli}
Probab=100.00 E-value=9.1e-46 Score=364.39 Aligned_cols=266 Identities=19% Similarity=0.236 Sum_probs=215.8
Q ss_pred CCCCceEEEecCC-ceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHHHHhcCC--CCCHHHHHH
Q 046037 91 GIGGFGGLFPLGD-SYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATS--HLEVDLAEK 167 (388)
Q Consensus 91 ~~GdDaavi~~~~-~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~~~--~~~~e~~~e 167 (388)
+.||||||+++++ ..+++|||++. +.+.+|+++||++|++|+|||+||||+|++++++++++ +++++++++
T Consensus 47 ~~gdDaavi~~~~~~~lv~ttD~~~------~~~~~p~~~G~~ava~~lsDiaamGA~P~~~l~~l~~p~~~~~~~~l~~ 120 (347)
T 3u0o_A 47 ETRDDAAVYDLGNGTSVISTTDFFM------PIVDNPFDFGRIAATNAISDIFAMGGKPIMAIAILGWPINKLSPEIARE 120 (347)
T ss_dssp SSCCSSEEEECTTSEEEEEEEEEES------CCSSCHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECTTTSCHHHHHH
T ss_pred CCCCceEEEEeCCCcEEEEEecCCC------CCccCHHHHHHHHHHHHHHHHHHcCCchHHHHhheeCCCCCCCHHHHHH
Confidence 4499999999975 56999999863 33678899999999999999999999999999999854 678999999
Q ss_pred HHHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEcCCcccCCCCCCCCCEEEEeCCCchHHHHHHHHHHHH
Q 046037 168 VIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRRVL 247 (388)
Q Consensus 168 i~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~~~ 247 (388)
+++||.++|+++||+|+||||+.+|+ ..+++|++|.+++++++++++++|||.|+++|++|.+..+..+.++.
T Consensus 121 i~~Gi~~~~~~~gv~lvGGdt~~~~~------~~~~~t~vG~v~~~~~~~~~~a~~GD~iiltg~~G~~~~~~~~~~~~- 193 (347)
T 3u0o_A 121 VTEGGRYACRQAGIALAGGHSIDAPE------PIFGLAVTGIVPTERVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSL- 193 (347)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEECSS------CEEEEEEEEEEEGGGCCCSSCCCTTCEEEESSCBCHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHcCCEEEcceeccCCC------cEEEEEEEEEECCcceecCCCCCCCCEEEEeCCccHHHHHHHHHhCc-
Confidence 99999999999999999999999873 34678899999988899999999999999999999765444332211
Q ss_pred hccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCccEEecCCCChhhhhhhhhcC-CCceEEEEcCCCCChHH
Q 046037 248 AQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVFP-KGLGAVIYEDSWKVPAV 326 (388)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~~~-s~~g~~I~~~~ip~~~~ 326 (388)
+.. +......+.+.+|.+. ...+++.+.+|+|+|||+|||+.+|+||+. |++|++|+.++||+++.
T Consensus 194 ------~~~---~~~~~~~~~~~~~~~~----~~~l~~~~~v~a~~DiT~gGL~~~L~e~a~~sgvg~~I~~~~iPi~~~ 260 (347)
T 3u0o_A 194 ------LKP---EHQGLATEVMCRMNIA----GASFANIEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYEAIPKLPG 260 (347)
T ss_dssp ------CCG---GGTTHHHHHHHSCCTH----HHHHTTCTTEEEEEECCSSHHHHHHHHHHHHHTEEEEEETTTSCBCTT
T ss_pred ------CCh---HHHHHHHHHHHhhchH----HHHHHhcCCCEEEEcCCCcHHHHHHHHHHHHcCCeEEEeeccCCCCHH
Confidence 110 0012445566666542 234455567999999999999999999995 89999999999999999
Q ss_pred HHHHHHhCCCCHHHHH----------------hhc----CCCeeEEEEEecccHHHHHHhcCC-CCCeEEEEEEEcC
Q 046037 327 FKWIQQAGRIEDSEMR----------------RTF----NMGIGMVLVVSKETSHTILEGGCG-TYEAYHIGEVVNG 382 (388)
Q Consensus 327 ~~~i~~~~~~~~~e~~----------------~~f----~~G~gll~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~ 382 (388)
+.++++.+.++..+++ +.| +++.||+++|++++++++++.+++ ++++++||+|++.
T Consensus 261 ~~~~~~~g~~~~~~~~n~~~~~~~~~~l~~~~~~ll~dp~~sggll~~v~~~~~~~~~~~l~~~g~~a~~IG~V~~~ 337 (347)
T 3u0o_A 261 VEEYIKLGAVPGGTERNFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGELVPA 337 (347)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHGGGBCCCCHHHHHHHTCCCTTCCEEEEECHHHHHHHHHHHHHTTCCCCCCEEEEEC
T ss_pred HHHHHHcCCCCchhhhhhhhhcccccccchHHHHhccCcccCccEEEEEcHHHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 9999987655554432 222 455579999999999999998876 6899999999874
No 18
>3fd5_A Selenide, water dikinase 1; selenophosphate synthetase, SELD, ATP-binding, nucleotide-binding, selenium, transferase; HET: AP2; 1.90A {Homo sapiens} PDB: 3fd6_A*
Probab=100.00 E-value=4.1e-45 Score=365.13 Aligned_cols=273 Identities=19% Similarity=0.188 Sum_probs=215.4
Q ss_pred CCCCceEEEecC--CceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHH-HHHHhcCC-CCCH----
Q 046037 91 GIGGFGGLFPLG--DSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLF-FLDYFATS-HLEV---- 162 (388)
Q Consensus 91 ~~GdDaavi~~~--~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~-~ld~l~~~-~~~~---- 162 (388)
++||||||++++ +..+++|||++. +.+.+|+++||++|++|+|||+||||+|++ ++++|+++ .+++
T Consensus 67 ~~GdDaAV~~~~~~~~~lv~ttD~f~------p~~~dP~~~G~~Ava~~lsDiaAmGA~P~~~~l~~l~~p~~~~~~~~~ 140 (394)
T 3fd5_A 67 GIGMDTCVIPLRHGGLSLVQTTDYIY------PIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDRERD 140 (394)
T ss_dssp CTTSSSEEEECSSTTCEEEEEEEEEC------CCSSCHHHHHHHHHHHHHHHHHHTTCCCCSEEEEEEEEETTSCHHHHH
T ss_pred cCCCCeeEEecCCCCcEEEEEeeccC------CcCCCHHHHHHHHHHHHHHHHHHCCchhHHHHhhhEecCCCCChhHHH
Confidence 789999999995 568999999972 346789999999999999999999999998 56888754 4666
Q ss_pred HHHHHHHHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEcCCcccCCCCCCCCCEEEEeCCCchHHHHHHH
Q 046037 163 DLAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSL 242 (388)
Q Consensus 163 e~~~ei~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl 242 (388)
++++++++||.++|+++|++|+||||..+|. +.+++|++|.+++++++++++++|||.|+++|++|.|..++..
T Consensus 141 ~~l~~i~~Gi~~~~~~~gv~lvGGdT~~~p~------~~i~~t~~G~v~~~~~l~~~~a~~GD~Iiltg~lG~~~~~~~~ 214 (394)
T 3fd5_A 141 KVMPLIIQGFKDAAEEAGTSVTGGQTVLNPW------IVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVH 214 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEEEESS------CEEEEEEEEEECGGGCCCTTCCCTTCEEEESSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcEEeeeEEEcCC------cEEEEEEEEEEcCCceecCCCCCCCCEEEEECCccHHHHHHHH
Confidence 5899999999999999999999999999873 3678899999998889999999999999999999999865432
Q ss_pred HHHHHhccC--CccccCCCCchhHHHHHhhccch---hhHHHHHHHHHhCCccEEecCCCChhhhhhhhhcC-CCceEEE
Q 046037 243 VRRVLAQSD--LSLKDQLPSENTTLGEALMAPTV---IYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVFP-KGLGAVI 316 (388)
Q Consensus 243 ~~~~~~~~~--~~~~~~~~~~~~~~~e~ll~p~~---~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~~~-s~~g~~I 316 (388)
+.+...+ ..+...++. ..+.+++.+|.+ .+.+....+++++.+|+|+|||+|||+++|+||+. |++|++|
T Consensus 215 --~~l~~~~~~~~l~~~~~~--~~l~~~~~~~~~~~~~l~~~~~~l~~~~~v~A~~DvT~gGL~~~L~ema~aSgvg~~I 290 (394)
T 3fd5_A 215 --QWLDIPEKWNKIKLVVTQ--EDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSF 290 (394)
T ss_dssp --HC------------CCCH--HHHHHHHHHHHHHHHSCSHHHHHHHHHTTCCEEEECCTTHHHHHHHHHHTTCSSSEEE
T ss_pred --HHhhccchhhhhhccCCH--HHHHHHHHHHHHHHHHHHHHHHHHHhhcCceEEEeCCCcHHHHHHHHHHHhcCCcEEE
Confidence 1111100 011112221 233333333321 12234455666778999999999999999999995 8999999
Q ss_pred EcCCCCChHHHHHHHHhCCCCHHHHHhhc------CCCeeEEEEEecccHHHHHHhcCC-----CCCeEEEEEEEcCCc
Q 046037 317 YEDSWKVPAVFKWIQQAGRIEDSEMRRTF------NMGIGMVLVVSKETSHTILEGGCG-----TYEAYHIGEVVNGEG 384 (388)
Q Consensus 317 ~~~~ip~~~~~~~i~~~~~~~~~e~~~~f------~~G~gll~~v~~e~~~~i~~~l~~-----~~~~~~IG~V~~~~g 384 (388)
+.++||+++.+.++++.++ ++ +.+| ++| +||++|++++++++++.+++ ++++++||+|+++++
T Consensus 291 ~~~~iPi~~~~~~~~~~~~-~~---~~l~~g~d~etsG-gLL~~v~~~~~~~~~~~l~~~~~~~g~~a~~IG~V~~~~~ 364 (394)
T 3fd5_A 291 VIHNLPVLAKMAAVSKACG-NM---FGLMHGTCPETSG-GLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNR 364 (394)
T ss_dssp EEEEEEEETTHHHHHHHTT-TS---SCGGGTCCCCSSC-CEEEEECHHHHHHHHHHHHCC---CCCCCEEEEEEEESSS
T ss_pred EeccCCCCHHHHHHHHhcc-hh---hhhhcccCcccCC-cEEEEECHHHHHHHHHHHHhccccCCCCEEEEEEEEeCCc
Confidence 9999999999999998876 33 2334 777 79999999999999998864 578999999998765
No 19
>1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A*
Probab=100.00 E-value=2.1e-37 Score=325.40 Aligned_cols=268 Identities=21% Similarity=0.284 Sum_probs=207.6
Q ss_pred CCCCCceEEEecCC-ceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHHHHhcCCCCCHHHHHHH
Q 046037 90 PGIGGFGGLFPLGD-SYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKV 168 (388)
Q Consensus 90 ~~~GdDaavi~~~~-~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~~~~~~~e~~~ei 168 (388)
+++||||||+++++ ..+++++|+ |+.+.+.+|+.+|+++|++|+|||+||||+|++++++|+++ ++++++
T Consensus 60 ~g~gdDAavi~~~~~~~l~~t~e~-----h~~p~~~~P~~gg~~av~~~lrDi~a~GA~P~a~l~~l~~g----~~l~~~ 130 (615)
T 1vk3_A 60 TGFEGNAGVVNLDDYYSVAFKIES-----HNHPSAIEPYNGAATGVGGIIRDVLAMGARPTAIFDSLHMS----RIIDGI 130 (615)
T ss_dssp CTTSSSTTEEESSSSEEEEEEEEE-----CHHHHHHCHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEES----SCCHHH
T ss_pred CCCCCceEEEEeCCCeEEEEEecc-----cCCccccChhHHHHHHHHHHhccccccCceehhhhhhhhHH----HHHHHH
Confidence 67899999999974 578999995 44444456789999999999999999999999999999987 689999
Q ss_pred HHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEcCCcccCCCCCCCCCEEEEeCC----CchHHHHHHHHH
Q 046037 169 IKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPS----SGVHSNGFSLVR 244 (388)
Q Consensus 169 ~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~----~G~~~~G~sl~~ 244 (388)
++|+.++|+++|+|++||||..+|. |+..+ .++++++|.+++++++++..+++||.|+++|+ +|.|+++ ++.
T Consensus 131 ~~Gi~~~~~~~GvplvGG~t~~~~~-y~~~p-~~~~~~vG~v~~~~~~~~~~~~~GD~Iil~G~~tg~~G~~g~~--~~~ 206 (615)
T 1vk3_A 131 IEGIADYGNSIGVPTVGGELRISSL-YAHNP-LVNVLAAGVVRNDMLVDSKASRPGQVIVIFGGATGRDGIHGAS--FAS 206 (615)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEECGG-GTTCC-EEEEEEEEEEETTSCCCSSCCSTTCEEEEEESCBCSCC----------
T ss_pred HHHHHHHHHHcCCCEeEEEEEEecC-CCCCc-eEEEEEEEEEcHHHccCccCCCCcCEEEEECCCCCCCcccHHH--HHH
Confidence 9999999999999999999998875 54444 48899999999888888898999999999776 6778765 333
Q ss_pred HHHhccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCccEEecCCCChhhhhhhhhc-CCCceEEEEcCCCCC
Q 046037 245 RVLAQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVF-PKGLGAVIYEDSWKV 323 (388)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~~-~s~~g~~I~~~~ip~ 323 (388)
+.+.... ......+. ...+.+. .+++.++++.+.+.+++|||+|+|||+.+|.||+ .+++|++|++++||+
T Consensus 207 ~~~~~~~-~~~~~v~~-~~~~~e~------~~~~~~~~l~~~~~i~a~~Dis~gGL~~~l~ema~~sg~G~~Idl~~vP~ 278 (615)
T 1vk3_A 207 EDLTGDK-ATKLSIQV-GDPFAEK------MLIEAFLEMVEEGLVEGAQDLGAGGVLSATSELVAKGNLGAIVHLDRVPL 278 (615)
T ss_dssp ---------CGGGCCC-CCHHHHH------HHHHHHHHHHHHTCCSEEEECCTTHHHHHHHHHHHHTTCEEEEEGGGSCB
T ss_pred HHhhccc-ccccccCc-CCHHHHH------HHHHHHHHHHhcCCeeEEEeCCCccHHHHHHHHHHhCCceEEEEecccCC
Confidence 3222110 00011111 1122222 2456677777778899999999999999999998 489999999999998
Q ss_pred hHHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC-CCCeEEEEEEEcCCceEE
Q 046037 324 PAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG-TYEAYHIGEVVNGEGVSY 387 (388)
Q Consensus 324 ~~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~~gv~~ 387 (388)
++. ++++.|++...+++ +|+++|++++.+++++.+++ +.++++||+|++++.+.+
T Consensus 279 ~~~--------~~~~~e~l~sesq~-r~l~~v~~~~~~~~~~~~~~~g~~~~vIG~Vt~~~~l~v 334 (615)
T 1vk3_A 279 REP--------DMEPWEILISESQE-RMAVVTSPQKASRILEIARKHLLFGDVVAEVIEEPVYRV 334 (615)
T ss_dssp SST--------TCCHHHHHHCCCSS-EEEEEECGGGHHHHHHHHHHTTCEEEEEEEEESSCEEEE
T ss_pred CCC--------CCCHHHHHHcCCCC-eEEEEEcHHHHHHHHHHHHHcCCCEEEEEEEEeCCeEEE
Confidence 753 57888887666776 69999999999999988875 689999999998766543
No 20
>3ac6_A Phosphoribosylformylglycinamidine synthase 2; purine metabolism, ATP-binding, ligase, nucleotide-binding, biosynthesis; HET: ADP; 2.35A {Thermus thermophilus} PDB: 3viu_A*
Probab=100.00 E-value=1.1e-36 Score=326.24 Aligned_cols=270 Identities=16% Similarity=0.225 Sum_probs=205.0
Q ss_pred CCCCceEEEecCC-ceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHHHHhcCCCCC-H---HHH
Q 046037 91 GIGGFGGLFPLGD-SYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHLE-V---DLA 165 (388)
Q Consensus 91 ~~GdDaavi~~~~-~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~~~~~~-~---e~~ 165 (388)
++||||||+++++ ..+++++|+ |+.+.+.+|+++|+++|++|+|||+||||+|+++++++.+++++ + +++
T Consensus 64 g~gdDaavi~~~~~~~l~~~ve~-----h~~p~~~~P~~gg~~~v~~~l~Di~amGA~P~~~l~~l~~~~~~~~~~~~~l 138 (725)
T 3ac6_A 64 GPGENAGVVRVGEGWAVAFKIES-----HNHPSAVEPFQGAATGVGGILRDIMSMGARPIALLDSLRFGPPEEARSRYLL 138 (725)
T ss_dssp CTTSSSEEEEEETTEEEEEEEEE-----CHHHHHHCHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEESCTTSHHHHHHH
T ss_pred ecCCceEEEEeCCCeEEEEEeCc-----CCCCcccChHHHHHHHHhhhhhhhhccCChhHhheeeEEcCCCCCccHHHHH
Confidence 7899999999874 578899985 34344456889999999999999999999999999999987765 3 689
Q ss_pred HHHHHHHHHHHHHcCCeEecccceeeCCcccCCCcceEEEEEEEEcCCcccCCCCCCCCCEEEEeC----CCchHHHHHH
Q 046037 166 EKVIKGIVDGCQQSDCVLLGGETAEMPDFYAAGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLP----SSGVHSNGFS 241 (388)
Q Consensus 166 ~ei~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g----~~G~~~~G~s 241 (388)
+++++|+.++|+++|++++||||..+|++ ...++ +++|++|.++++++ .++++++||.|+++| +.|.|+++++
T Consensus 139 ~~~~~Gi~~~~~~~G~~lvgG~t~~~~~~-~~~~~-i~~~~vG~v~~~~~-~~~~a~~GD~ii~~G~~~g~~G~gg~~~~ 215 (725)
T 3ac6_A 139 KGVVSGIAFYGNAIGVPTVGGDLYFHEGY-RENPL-VNAMCLGLLREEHL-KRSRASLGRPIYYAGAKTGRDGIGGAAFA 215 (725)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEECGGG-SSSCE-EEEEEEEEEEGGGC-CCBCCCTTCEEEEEESCBCSCCC------
T ss_pred HHHHHHHHHHHHHhCCCeeEEEEEEeCCc-CCCce-EEEEEEEEeChhhc-ccCCCCCCCEEEEECCCCCCCcchHHHHH
Confidence 99999999999999999999999998763 33344 88999999987664 478899999999977 7888887654
Q ss_pred HHHHHHhccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCccEEecCCCChhhhhhhhhcC-CCceEEEEcCC
Q 046037 242 LVRRVLAQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVFP-KGLGAVIYEDS 320 (388)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~~~-s~~g~~I~~~~ 320 (388)
. +.+... .....|. .++++.++.+ .+.+.++++++.+.+++|+|+|+|||+.+|.||+. |++|++|++++
T Consensus 216 ~--~~~~~~---~~~~~p~--v~~g~~~~e~--~~~~~~~~l~~~~~i~a~~Di~~gGL~~~l~ema~~sg~g~~i~l~~ 286 (725)
T 3ac6_A 216 S--RELKEE---KAEDRPA--VQVGDPFLGK--LLMEATLEAIELDLVEGVQDMGAAGLTSSLSELAHKSGLGVELHLDL 286 (725)
T ss_dssp -----------------------CCCHHHHH--HHHHHHHHHHHTTCEEEEEECCTTHHHHHHHHHHHHTTSEEEEEGGG
T ss_pred H--Hhhccc---cccCCcc--cccCCHHHHH--HHHHHHHHHHhcCCeeEEEeCCCChHHHHHHHHHHhcCCeEEEEecc
Confidence 2 222111 0001111 1112222222 24566777777788999999999999999999994 89999999999
Q ss_pred CCChHHHHHHHHhCCCCHHHHHhhcCCCe-eEEEEEecccHHHHHHhcCC-CCCeEEEEEEEcCCceEE
Q 046037 321 WKVPAVFKWIQQAGRIEDSEMRRTFNMGI-GMVLVVSKETSHTILEGGCG-TYEAYHIGEVVNGEGVSY 387 (388)
Q Consensus 321 ip~~~~~~~i~~~~~~~~~e~~~~f~~G~-gll~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~~gv~~ 387 (388)
+|+++. ++++.|++ |+++. +|+++|+|++++++++.+++ +.++++||+|++++++.+
T Consensus 287 vP~~~~--------~~~~~e~~--~se~q~~ll~~v~~~~~~~~~~~~~~~~~~~~vIG~vt~~~~~~~ 345 (725)
T 3ac6_A 287 VPTREE--------GMTPEELL--LSESQERMVLVPKEGKEKALEEVFGRWGLDCVPVARTIPERVFRV 345 (725)
T ss_dssp SCBSSS--------SCCHHHHH--HCCCSSEEEEEECTTCHHHHHHHHHHTTCCEEEEEEEESSSEEEE
T ss_pred CCCCcC--------CCCHHHHH--hcCCcCcEEEEEChHHHHHHHHHHHHcCCCEEEEEEEEeCCeEEE
Confidence 998753 57888875 45543 59999999999999988865 689999999998776543
No 21
>3ac6_A Phosphoribosylformylglycinamidine synthase 2; purine metabolism, ATP-binding, ligase, nucleotide-binding, biosynthesis; HET: ADP; 2.35A {Thermus thermophilus} PDB: 3viu_A*
Probab=100.00 E-value=3.5e-35 Score=314.44 Aligned_cols=262 Identities=15% Similarity=0.129 Sum_probs=209.7
Q ss_pred CCC-CceEEEecC--CceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHHHHhcCCCC-CHH---
Q 046037 91 GIG-GFGGLFPLG--DSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHL-EVD--- 163 (388)
Q Consensus 91 ~~G-dDaavi~~~--~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~~~~~-~~e--- 163 (388)
.+| +||||++++ +..+++++|+++... ..+|+.+|+.+|++|+|||+||||+|++++++++++++ +++
T Consensus 425 ~pg~~DaaVi~~~~~~~~la~s~d~~~~~~-----~~dP~~~g~~AVaeav~di~a~Ga~Pl~~~~~l~~g~~~~~~~~~ 499 (725)
T 3ac6_A 425 LPGKGDAAVLWIKGTRLGVAAKVDQNPRYS-----RLHPRLGAMHALAEACRNVSVVGAKPLAYTDGLNLGSPETPEGYH 499 (725)
T ss_dssp CCSCCSSEEEEETTSSEEEEEEEECCHHHH-----HHCHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECSCSSSHHHHH
T ss_pred cCCCCceEEEEeCCCCeEEEEEEcCCCCee-----eeCHHHHHHHHHHHHHHHHHHcCCcceEEEEEEEcCCCCChhHHH
Confidence 578 999999997 468999999976432 23467999999999999999999999999999998877 453
Q ss_pred HHHHHHHHHHHHHHHcCCeEecccceeeCCcccCC-CcceEEEEEEEEcCCcccCCCCCCCCCEEEEeCCCchHHHHHHH
Q 046037 164 LAEKVIKGIVDGCQQSDCVLLGGETAEMPDFYAAG-EYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSL 242 (388)
Q Consensus 164 ~~~ei~~Gi~~~c~~~g~~lvGGdt~~~p~~~~~~-~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl 242 (388)
++.++++|+.++|+++|++++||||+.++..+... ..+++++++|.++..+.+++..+++||.|+++++.|.|.+|+.+
T Consensus 500 ~l~~~v~Gi~~a~~~~gv~ivgG~ts~~~~~~~~~i~ptl~i~~vG~v~~~~~i~~~~~~~GD~lil~g~~g~~~ggs~l 579 (725)
T 3ac6_A 500 ELAETIAGLKEASEALGVPVVSGNVSLYNESGGKRIPPTAMVGVVGVLEVDKRAEMGFRRPGEVLLLIGEERGELGASEV 579 (725)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEECCCEETTEECCCEEEEEEEEEEEGGGCCBSSCCSTTCEEEEESCSCCBCTTCHH
T ss_pred HHHHHHHHHHHHHHHhCCCeeeeeeeecCCCCCCccCCceEEEEEEEechhhccChhhCCCCCEEEEEcCCCCCccHHHH
Confidence 78999999999999999999999999887653211 13678899999987778888999999999999999999888888
Q ss_pred HHHHHhccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhCCccEEecCCCChhhhhhhhhc-CCCceEEEEcCCC
Q 046037 243 VRRVLAQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVF-PKGLGAVIYEDSW 321 (388)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~~-~s~~g~~I~~~~i 321 (388)
+++.+.... +..|.. .+. +.+.+.+.++++++++.+++|||||+|||+.+|+||+ .+++|++|+.+.
T Consensus 580 ~~~~~~~~~----~~~p~~--d~~-----~~~~~~~~v~~l~~~~~v~a~~Dis~GGL~~~L~ema~~~~~G~~i~~~~- 647 (725)
T 3ac6_A 580 LYLLTGKEF----GHPPRL--DLG-----REKAVQEAIRDLIQRGLTRTAHDVAEGGLLLALAEMTFPYGVGATVEVRE- 647 (725)
T ss_dssp HHHHHSCCC----SCCCCC--CHH-----HHHHHHHHHHHHHHTTSCSBEEECCTTHHHHHHHHTTTTTCCCEEEECSC-
T ss_pred HHHHhcccC----CCCCCC--CHH-----HHHHHHHHHHHHHhcCCEEEEEeCCCCcHHHHHHHHHhcCCCcEEEEeCc-
Confidence 876553221 222321 111 1234566677888888899999999999999999998 689999999753
Q ss_pred CChHHHHHHHHhCCCCHHHHHhhcCCCee-EEEEEecccHHHHHHhcCC-CCCeEEEEEEEcCCceEE
Q 046037 322 KVPAVFKWIQQAGRIEDSEMRRTFNMGIG-MVLVVSKETSHTILEGGCG-TYEAYHIGEVVNGEGVSY 387 (388)
Q Consensus 322 p~~~~~~~i~~~~~~~~~e~~~~f~~G~g-ll~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~~gv~~ 387 (388)
+. +..+|+++.| +|++|++++++++++.+++ +.++++||+|++ +.+.+
T Consensus 648 ~~-----------------~~~Lf~e~~G~~vv~v~~~~~~~~~~~l~~~g~~~~~IG~v~~-~~~~i 697 (725)
T 3ac6_A 648 EG-----------------LEALFGEAPSRVLFTVEKTRLQEATLLLEERGLPYRVLGETGG-KSLTV 697 (725)
T ss_dssp CS-----------------HHHHTCBCSSCEEEEECGGGHHHHHHHHHHTTCCEEEEEEECS-SEEEE
T ss_pred ch-----------------HHHhhCCCCCeEEEEEcHHHHHHHHHHHHhCCCCeEEEEEEeC-CEEEE
Confidence 11 1246888887 9999999999999888865 688999999874 44543
No 22
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=99.94 E-value=1.7e-26 Score=256.72 Aligned_cols=262 Identities=10% Similarity=0.014 Sum_probs=192.8
Q ss_pred CCCceEEEecC---CceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHH-HHhc----CCCCC-H
Q 046037 92 IGGFGGLFPLG---DSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFL-DYFA----TSHLE-V 162 (388)
Q Consensus 92 ~GdDaavi~~~---~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~l-d~l~----~~~~~-~ 162 (388)
+|+||||++++ +..+++++|..+... ..+|+..|+.||++|++||+|||++|+..+ .+++ +++++ .
T Consensus 684 p~~DaAVi~~~~~~~~gla~s~g~~p~~~-----~~dP~~ga~~AVaealsnlaA~Ga~pl~~v~lsln~~~~~g~P~~~ 758 (1303)
T 3ugj_A 684 PVADCAVTTASLDSYYGEAMSIGERAPVA-----LLDFAASARLAVGEALTNIAATQIGDIKRIKLSANWMAAAGHPGED 758 (1303)
T ss_dssp ECCSSEEEESSTTCSCEEEEEEEECGGGG-----GTCHHHHHHHHHHHHHHHHTTSCCCSGGGCEEEEEEECBTTSTTHH
T ss_pred CCCCeEEEEEeCCCCeEEEEEEecCCCcc-----ccCHHHHHHHHHHHHHHHhhcCCCccHHHeEeecccccccCCCchH
Confidence 48999999974 467999999975322 345789999999999999999999999844 4454 36665 4
Q ss_pred HHHHHHHHHHH-HHHHHcCCeEecccceeeCCc----------ccCCCcceEEEEEEEEcC-CcccCCCCCCCCCEEEEe
Q 046037 163 DLAEKVIKGIV-DGCQQSDCVLLGGETAEMPDF----------YAAGEYDLSGFAVGIVKK-DSVIDGKNIVPGDVLIGL 230 (388)
Q Consensus 163 e~~~ei~~Gi~-~~c~~~g~~lvGGdt~~~p~~----------~~~~~~~ls~t~vG~v~~-~~~l~~~~a~~GD~Ii~~ 230 (388)
+.+.++++|+. ++|+++|++++||+++.+... +. .+.+++++++|.+++ .+.+++..+++||.|+++
T Consensus 759 ~~L~~a~~g~~~d~c~~lgvpiiGGkdSlsn~t~~~~~g~~~~v~-~P~TlvitavG~v~dv~~~vt~~~k~~Gd~LilV 837 (1303)
T 3ugj_A 759 AGLYDAVKAVGEELCPQLGLTIPVGKDSMSMKTRWQEGNEQREMT-SPLSLVISAFARVEDVRHTLTPQLSTEDNALLLI 837 (1303)
T ss_dssp HHHHHHHHHHHTTHHHHHTCEEEEEEEECBCEEEECCC--CEEEE-CCCEEEEEEEEEESCGGGCCCSCCCCSSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeeccccCccceecccCCCcCccC-CCCceEEEEEEECCCcCcccCcccCCCCCEEEEE
Confidence 78899999999 999999999999998865210 11 234678899999876 678888888999988775
Q ss_pred --CCCchHHHHHHHHHHHHhccCCccccCCCCc--hhHHHHHhhccchhhHHHHHHHHHhCCccEEecCCCChhhhhhhh
Q 046037 231 --PSSGVHSNGFSLVRRVLAQSDLSLKDQLPSE--NTTLGEALMAPTVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPR 306 (388)
Q Consensus 231 --g~~G~~~~G~sl~~~~~~~~~~~~~~~~~~~--~~~~~e~ll~p~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~ 306 (388)
+....+..| |.+.+++... ....|.. ...+. .+.+.++.+++++.++||||+|+|||+.+|.|
T Consensus 838 ~lg~~~~~LGG-S~la~~~g~~----g~~~P~vd~~~~lk--------~~~~~v~~li~~G~v~AahDvSdGGLa~aL~E 904 (1303)
T 3ugj_A 838 DLGKGHNALGA-TALAQVYRQL----GDKPADVRDVAQLK--------GFYDAMQALVAARKLLAWHDRSDGGLLVTLAE 904 (1303)
T ss_dssp ETTTTCCCCTT-SHHHHHTTCC----CSCCCCCCCHHHHH--------HHHHHHHHHHHTTCCSEEEECCTTHHHHHHHH
T ss_pred ECCCCCCCccH-HHHHHHhCcc----cCCCCCCCCHHHHH--------HHHHHHHHHHHcCCeEEEEeCCCChHHHHHHH
Confidence 421111112 2223333321 1223321 11111 13445667788899999999999999999999
Q ss_pred hc-CCCceEEEEcCCCCChHHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCC-CCC--eEEEEEEEcC
Q 046037 307 VF-PKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCG-TYE--AYHIGEVVNG 382 (388)
Q Consensus 307 ~~-~s~~g~~I~~~~ip~~~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~-~~~--~~~IG~V~~~ 382 (388)
|+ .+++|++|+.+.+|.++. ..+|++.+|.+++|++++.+++++.+++ +++ +++||+|+++
T Consensus 905 ma~as~vG~~Idl~~ip~~~~---------------~~LF~E~~G~vv~V~~~~~~~v~~~l~~~gi~~~a~~IG~V~~~ 969 (1303)
T 3ugj_A 905 MAFAGHCGVQVDIAALGDDHL---------------AALFNEELGGVIQVRAEDRDAVEALLAQYGLADCVHYLGQALAG 969 (1303)
T ss_dssp HHHHHTSEEEEECGGGCSCHH---------------HHHHCCCSEEEEEEEGGGHHHHHHHHHHTTCGGGEEEEEEEESS
T ss_pred HHHhCCceEEEEecCCCCchh---------------HHHhCCCCCeEEEEEHHHHHHHHHHHHhCCCCCceEEEEEEcCC
Confidence 98 589999999988886541 1258888888999999999998888765 565 7999999987
Q ss_pred CceEE
Q 046037 383 EGVSY 387 (388)
Q Consensus 383 ~gv~~ 387 (388)
..+.+
T Consensus 970 ~~l~i 974 (1303)
T 3ugj_A 970 DRFVI 974 (1303)
T ss_dssp SEEEE
T ss_pred CcEEE
Confidence 65544
No 23
>1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A*
Probab=99.91 E-value=5.3e-25 Score=231.26 Aligned_cols=215 Identities=13% Similarity=0.074 Sum_probs=161.6
Q ss_pred CCCCCceEEEecC-CceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhhCChhHHHHHHhcCCCC-CHHH-HH
Q 046037 90 PGIGGFGGLFPLG-DSYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTSGAKPLFFLDYFATSHL-EVDL-AE 166 (388)
Q Consensus 90 ~~~GdDaavi~~~-~~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~GA~P~~~ld~l~~~~~-~~e~-~~ 166 (388)
.++|+||||++++ +..+++|+|..+.. ...+|+.+|+.||++|+|||+||||+|++++++++++++ ++++ +.
T Consensus 395 ~~pg~DaaV~~~~~~~~~~~t~d~~~~~-----~~~dP~~~g~~Avaealsdl~A~Ga~p~~~~~~l~~~~~~~~~~~l~ 469 (615)
T 1vk3_A 395 VPPGFGAAVMRIKRDGGYSLVTHSRADL-----ALQDTYWGTLIAVLESVRKTLSVGAEPLAITNCVNYGDPDVDPVGLS 469 (615)
T ss_dssp SCGGGSCEEEEEETTEEEEEEEECCHHH-----HTTCHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECSCTTTCHHHHH
T ss_pred eccCCCeEEEEEcCCcEEEEEecCCCcc-----cccCHHHHHHHHHHHHHHHHHHcCCccceeEEEEecCCCCCchHHHH
Confidence 3789999999986 46799999987321 235688999999999999999999999999999887654 3345 88
Q ss_pred HHHHHHHHHHHHcCCeEecccceeeCCccc-CCCcceEEEEEEEEcCCcccCCCCCCCCCEEEEeCCCchHHHHHHHHHH
Q 046037 167 KVIKGIVDGCQQSDCVLLGGETAEMPDFYA-AGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLPSSGVHSNGFSLVRR 245 (388)
Q Consensus 167 ei~~Gi~~~c~~~g~~lvGGdt~~~p~~~~-~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g~~G~~~~G~sl~~~ 245 (388)
++++|+.++|+++|++++|||++.++.... ..+.++++|++|.++..+.++ +++|| |+++|......
T Consensus 470 ~~~~G~~~~~~~~g~~~igG~~S~~~~~~~~~~ppt~~i~a~G~v~~~~~~~---~~~Gd-l~l~g~~~~~~-------- 537 (615)
T 1vk3_A 470 AMMTALKNACEFSGVPVASGNASLYNTYQGKPIPPTLVVGMLGKVNPQKVAK---PKPSK-VFAVGWNDFEL-------- 537 (615)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEECCCEETTEECCCEEEEEEEEEECGGGCCC---CCSEE-EEEEEESSCCH--------
T ss_pred HHHHHHHHHHHHcCCCcccccccccCcCCCCcCCCeeEEEEEEEecCCcccc---CCCCe-EEEECCCCCCH--------
Confidence 999999999999999999999986542100 112468889999998766666 79999 99998432110
Q ss_pred HHhccCCccccCCCCchhHHHHHhhccchhhHHHHHHHHHhC-CccEEecCCCChhhhhhhhhcCCCceEEEEcCCCCCh
Q 046037 246 VLAQSDLSLKDQLPSENTTLGEALMAPTVIYVKQVLDIISEG-GVKGIAHITGGGFTDNIPRVFPKGLGAVIYEDSWKVP 324 (388)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~e~ll~p~~~~~~~~~~l~~~~-~v~a~~DIS~GGL~~~L~~~~~s~~g~~I~~~~ip~~ 324 (388)
....+ ..+.+..+++++ .++||||||+| +|.||. |++|++|+.+++|++
T Consensus 538 -----------------~~~~~--------~~~~~~~~~~~~~~v~a~~DvSdG----~l~em~-s~~g~~i~~~~iP~~ 587 (615)
T 1vk3_A 538 -----------------EREKE--------LWRAIRKLSEEGAFILSSSQLLTR----THVETF-REYGLKIEVKLPEVR 587 (615)
T ss_dssp -----------------HHHHH--------HHHHHHHHHHTTCEEECCTTSSCH----HHHHHH-HHTTCEEEECCCCCC
T ss_pred -----------------HHHHH--------HHHHHHHHHhCCCeEEEEEECCCC----HHHHHh-CCCcEEEEeCCCCCC
Confidence 01111 112233456678 89999999987 899997 999999999999986
Q ss_pred HHHHHHHHhCCCCHHHHHhhcCCCeeEEEEEecccHHHHHHhcCCCCCeEEEEEEE
Q 046037 325 AVFKWIQQAGRIEDSEMRRTFNMGIGMVLVVSKETSHTILEGGCGTYEAYHIGEVV 380 (388)
Q Consensus 325 ~~~~~i~~~~~~~~~e~~~~f~~G~gll~~v~~e~~~~i~~~l~~~~~~~~IG~V~ 380 (388)
+ .+ .++++|+.++.. -+++++.||+|+
T Consensus 588 ~----------~~----------d~~llfse~~~~---------~~v~~~~IG~v~ 614 (615)
T 1vk3_A 588 P----------AH----------QMVLVFSERTPV---------VDVPVKEIGTLS 614 (615)
T ss_dssp S----------SC----------EEEEEEESSCCC---------CSSCEEEEEEEE
T ss_pred C----------Cc----------ccEEEEeccccc---------CCCCeeEeeeEe
Confidence 3 11 346777775431 147899999997
No 24
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=99.89 E-value=1.1e-22 Score=226.17 Aligned_cols=274 Identities=15% Similarity=0.093 Sum_probs=183.5
Q ss_pred CCCCceEEEecC---------C----------ceEEEEeccCCCccccccccCChhHHHHHHHHHHHHHHhhh--CChhH
Q 046037 91 GIGGFGGLFPLG---------D----------SYLVAGTDGVGTKLKLAFETGIHDTIGIDLVAMSVNDIVTS--GAKPL 149 (388)
Q Consensus 91 ~~GdDaavi~~~---------~----------~~lv~stD~~~~k~~~~~~~~~~~~iG~~aVa~nvsDIaa~--GA~P~ 149 (388)
++||+|+|++.+ + ..++++.+. |-.|..-.|+..+.-.|...++|+.+| ||+|+
T Consensus 263 ~~~dna~vi~~~~~~~~~~~~~~~~~~~~~e~~~v~fK~ET-----HNHPsaIePf~GAaTGvGG~iRD~~~~G~GarPi 337 (1303)
T 3ugj_A 263 AYKDNAAVMEGSAVGRYFADHNTGRYDFHQEPAHILMKVET-----HNHPTAISPWPGAATGSGGEIRDEGATGRGAKPK 337 (1303)
T ss_dssp CSSSSSEEEEEEEEEEEEECTTTCBEEEEEEEEEEEEEEEE-----CHHHHHHCHHHHHHHHHHHHHHHHHTSTTCCEEE
T ss_pred EecCccEEeeecccccccccCCccccccccceeEEEEEEec-----cCCCCccCCcCcccceeEEEEEchhccCCCCEee
Confidence 789999999742 1 134444443 222222347899999999999999995 99999
Q ss_pred HHHHHhcCCCC----------------C-----HHHHHHHHHHHHHHHHHcCCeEecccceee------------CCccc
Q 046037 150 FFLDYFATSHL----------------E-----VDLAEKVIKGIVDGCQQSDCVLLGGETAEM------------PDFYA 196 (388)
Q Consensus 150 ~~ld~l~~~~~----------------~-----~e~~~ei~~Gi~~~c~~~g~~lvGGdt~~~------------p~~~~ 196 (388)
+.++.+.++++ . .+.+-+=+.|+++.++++|+|+|+|+|... +++
T Consensus 338 A~~~~~~~~~lr~~~~~~p~e~~~g~p~~~~~~~~i~~~g~~G~s~ygN~~Gvp~V~G~~~~~~~~~~~~~~~~~~g~-- 415 (1303)
T 3ugj_A 338 AGLVGFSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALTGYFRTYEEKVNSHNGEELRGY-- 415 (1303)
T ss_dssp EEEEEEEESCCCCTTCCCTTCCCCCCCTTSCCHHHHHHHHHHHHHHHHHHHTCCEEEEEEEECEEEEEETTEEEEEEC--
T ss_pred eeeeeeeeccccCCCCCCccccccCCchhccChhhhhhcccchHHHHHHhcCCCCcceEEEEEeeecccccccccccc--
Confidence 99976532221 1 123444444999999999999999999422 222
Q ss_pred CCCcceEEEEEEEEcCCcccCCCCCCCCCEEEEeC----CCchHHHHHHHHHHHHhccCCccccCCCCchhHHHHHhhcc
Q 046037 197 AGEYDLSGFAVGIVKKDSVIDGKNIVPGDVLIGLP----SSGVHSNGFSLVRRVLAQSDLSLKDQLPSENTTLGEALMAP 272 (388)
Q Consensus 197 ~~~~~ls~t~vG~v~~~~~l~~~~a~~GD~Ii~~g----~~G~~~~G~sl~~~~~~~~~~~~~~~~~~~~~~~~e~ll~p 272 (388)
..++ +..+++|.++++. +.+..++|||.|+++| ..|+|+..++..+..-.....+.. .+.. .....+.++.
T Consensus 416 ~kp~-v~~~gvG~i~~~~-~~~~~~~~Gd~Iiv~Gg~tgr~G~gGaa~sS~~~~~~~~~~~~~-~VQ~-g~p~~ek~~~- 490 (1303)
T 3ugj_A 416 HKPI-MLAGGIGNIRADH-VQKGEIVVGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFA-SVQR-DNPEMERRCQ- 490 (1303)
T ss_dssp SSCE-EEEEEEEEECGGG-SSCCCCCTTCEEEEEECCBCTTCC-----------------CGG-GCCC-CCHHHHHHHH-
T ss_pred CCce-eEEEEEEEEehHH-cccccCCCCCEEEEECCCCCcccCcHHHHhHHhhcccccccCch-hhcc-CCHHHHHHHH-
Confidence 1234 4456899998765 4455699999999997 688987655443321000000010 0100 1122222210
Q ss_pred chhhHHHHHHHHHhCCccEEecCCCChhhhhhhhhc-CCCceEEEEcCCCCChHHHHHHHHhCCCCHHHHHhhcCCCeeE
Q 046037 273 TVIYVKQVLDIISEGGVKGIAHITGGGFTDNIPRVF-PKGLGAVIYEDSWKVPAVFKWIQQAGRIEDSEMRRTFNMGIGM 351 (388)
Q Consensus 273 ~~~~~~~~~~l~~~~~v~a~~DIS~GGL~~~L~~~~-~s~~g~~I~~~~ip~~~~~~~i~~~~~~~~~e~~~~f~~G~gl 351 (388)
..++.++++.+.+.|++|+|+|.|||..+|.||+ .|++|++|+++++|+.+. +++|.|++...+.+ .|
T Consensus 491 --~li~~~lel~~~~~V~a~~D~t~GGL~~~l~Ema~~sgvG~~Idld~vP~~~~--------gl~p~ei~~sesqe-rm 559 (1303)
T 3ugj_A 491 --EVIDRCWQLGDANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDEP--------GMSPLEIWCNESQE-RY 559 (1303)
T ss_dssp --HHHHHHHTTGGGCCEEEEEECCTTTHHHHHHHHHHHTTCEEEEEGGGSCBSCT--------TCCHHHHHHCCCSS-EE
T ss_pred --HHHHHHHHHhccCCeeEEEECCCcHHHHHHHHHHHHcCCeEEEEhhhCCCCcc--------CCCHHHHHhCcCcc-eE
Confidence 1344555555667899999999999999999999 599999999999998753 78998885333333 49
Q ss_pred EEEEecccHHHHHHhcCC-CCCeEEEEEEEcCCceEE
Q 046037 352 VLVVSKETSHTILEGGCG-TYEAYHIGEVVNGEGVSY 387 (388)
Q Consensus 352 l~~v~~e~~~~i~~~l~~-~~~~~~IG~V~~~~gv~~ 387 (388)
+++|+|++++++++.+++ ++++++||+|+++..+.+
T Consensus 560 l~~V~pe~~~~~~~~~~~~g~~a~vIG~Vt~~~~v~l 596 (1303)
T 3ugj_A 560 VLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSL 596 (1303)
T ss_dssp EEEECGGGHHHHHHHHHHHTCCEEEEEEEESSCEEEE
T ss_pred EEEECHHHHHHHHHHHHHcCCCeEEEEEEecCCeEEE
Confidence 999999999999999876 699999999998877654
No 25
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=97.47 E-value=3.5e-05 Score=77.44 Aligned_cols=43 Identities=19% Similarity=0.105 Sum_probs=36.9
Q ss_pred ceEE-EEeeCCCHHHHHHHhhc--cCccCCCCccchhhhhhhhhhc
Q 046037 13 SRFF-ASKLNPTNNVLLNCAYE--CKLPFLSMASRRVSVNRCVLSM 55 (388)
Q Consensus 13 ~~~~-~~~~g~~~~~a~~~ay~--~~i~~~g~~~R~Dig~~~~~~~ 55 (388)
.|+. |++.|+|+++|++++|+ +.|+|+|+|||+|||.+++.+.
T Consensus 396 ~rvg~v~~~g~~~~ea~~~~~~~~~~i~~~~~~~r~dig~~~~~~~ 441 (451)
T 2yrx_A 396 GRVLLLAAKGETLAKAKEKAYEQLAAIDCDGLFYRRDIGRRAIERA 441 (451)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHHTTCBCTTEECCSCTTTTTC---
T ss_pred CeEEEEEEEeCCHHHHHHHHHHHhhccccCCeEechhhhhHHHhhC
Confidence 5665 58999999999999999 9999999999999998887544
No 26
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=91.43 E-value=0.073 Score=52.88 Aligned_cols=36 Identities=8% Similarity=-0.115 Sum_probs=31.4
Q ss_pred ceE-EEEeeCCCHHHHHHHhhc--cCccCCCCccchhhhhh
Q 046037 13 SRF-FASKLNPTNNVLLNCAYE--CKLPFLSMASRRVSVNR 50 (388)
Q Consensus 13 ~~~-~~~~~g~~~~~a~~~ay~--~~i~~~g~~~R~Dig~~ 50 (388)
+|+ .|++.|+|.++|++++|+ +.|+|+| ||+|||+.
T Consensus 383 ~~~g~v~~~g~~~~ea~~~~~~~~~~i~~~g--~~~~i~~~ 421 (451)
T 1ulz_A 383 SMIAKLITWAPTWDEAVERMRAALETYEITG--VKTTIPLL 421 (451)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHTCEECS--SCCSHHHH
T ss_pred chheEEEEECCCHHHHHHHHHHHHhhcEEeC--ccCCHHHH
Confidence 443 348999999999999999 9999999 99999963
No 27
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=91.42 E-value=0.054 Score=53.80 Aligned_cols=36 Identities=8% Similarity=-0.130 Sum_probs=31.5
Q ss_pred cceE-EEEeeCCCHHHHHHHhhc--cCccCCCCccchhhhh
Q 046037 12 SSRF-FASKLNPTNNVLLNCAYE--CKLPFLSMASRRVSVN 49 (388)
Q Consensus 12 ~~~~-~~~~~g~~~~~a~~~ay~--~~i~~~g~~~R~Dig~ 49 (388)
.+|+ .|++.|+|.++|++++|+ +.|+|+| ||+|||+
T Consensus 382 ~~~~~~v~~~g~~~~~a~~~~~~~~~~i~~~g--~~~~i~~ 420 (449)
T 2w70_A 382 DSMIGKLICYGENRDVAIARMKNALQELIIDG--IKTNVDL 420 (449)
T ss_dssp CSEEEEEEEEESSHHHHHHHHHHHHHHCEEES--SCCSHHH
T ss_pred CcceEEEEEEcCCHHHHHHHHHHHHhhcEEeC--cCCCHHH
Confidence 3443 358999999999999999 9999999 9999997
No 28
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=91.23 E-value=0.091 Score=52.37 Aligned_cols=37 Identities=8% Similarity=-0.144 Sum_probs=32.7
Q ss_pred ceEE-EEeeCCCHHHHHHHhhc--cCccCCCCccchhhhhhh
Q 046037 13 SRFF-ASKLNPTNNVLLNCAYE--CKLPFLSMASRRVSVNRC 51 (388)
Q Consensus 13 ~~~~-~~~~g~~~~~a~~~ay~--~~i~~~g~~~R~Dig~~~ 51 (388)
+++. |++.|+|.++|++++|+ +.|+|+|. |+|||.+.
T Consensus 395 ~~~~~v~~~g~~~~~a~~~~~~~~~~i~~~g~--~~~i~~~~ 434 (461)
T 2dzd_A 395 SLLVKLSTWALTFEQAARKMLRNLREFRIRGI--KTNIPFLE 434 (461)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHTCEEESS--CCSHHHHH
T ss_pred hhhheeEEEcCCHHHHHHHHHHHHHhcEEeCC--cCCHHHHH
Confidence 4454 68999999999999999 99999998 99999754
No 29
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A
Probab=89.12 E-value=0.16 Score=52.17 Aligned_cols=37 Identities=11% Similarity=-0.057 Sum_probs=29.6
Q ss_pred cceEEE-EeeCCCHHHHHHHhhc--cCccCCCCccchhhhh
Q 046037 12 SSRFFA-SKLNPTNNVLLNCAYE--CKLPFLSMASRRVSVN 49 (388)
Q Consensus 12 ~~~~~~-~~~g~~~~~a~~~ay~--~~i~~~g~~~R~Dig~ 49 (388)
.+|+.. ++.|+|.++|++++|+ ++|+|+|+ ||+||+.
T Consensus 491 ~~~~~~vi~~g~~~~eA~~~~~~al~~i~i~g~-~~~~i~~ 530 (554)
T 1w96_A 491 DSQFGHIFAFGENRQASRKHMVVALKELSIRGD-FRTTVEY 530 (554)
T ss_dssp SEEEEEEEEEESSHHHHHHHHHHHHHHHTTCC-----CCHH
T ss_pred CCceEEEEEEeCCHHHHHHHHHHHHhccEEEee-ccCCHHH
Confidence 457654 8999999999999999 99999999 9999996
No 30
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=63.37 E-value=2.7 Score=47.02 Aligned_cols=35 Identities=3% Similarity=-0.091 Sum_probs=31.4
Q ss_pred ceEE-EEeeCCCHHHHHHHhhc--cCccCCCCccchhhhh
Q 046037 13 SRFF-ASKLNPTNNVLLNCAYE--CKLPFLSMASRRVSVN 49 (388)
Q Consensus 13 ~~~~-~~~~g~~~~~a~~~ay~--~~i~~~g~~~R~Dig~ 49 (388)
+++- +++.|+|.++|++++|+ +.|+|+| ||+||+.
T Consensus 411 ~~l~~vi~~g~t~~eA~~~~~~al~~i~i~G--~~tni~~ 448 (1165)
T 2qf7_A 411 PLLVKVTAWAPNPLEAISRMDRALREFRIRG--VATNLTF 448 (1165)
T ss_dssp CEEEEEEEEESSHHHHHHHHHHHHHHCEEES--SCCSHHH
T ss_pred CceEEEEEEeCCHHHHHHHHHHHhhcEEEec--ccCCHHH
Confidence 3443 68999999999999999 9999999 9999996
No 31
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=43.77 E-value=7.6 Score=36.54 Aligned_cols=48 Identities=13% Similarity=0.071 Sum_probs=41.7
Q ss_pred HHHHHhhhCChhHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCeEe
Q 046037 137 SVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLL 184 (388)
Q Consensus 137 nvsDIaa~GA~P~~~ld~l~~~~~~~e~~~ei~~Gi~~~c~~~g~~lv 184 (388)
++.|++.+||.-..++..+.+++..+..+-+-+.-+.+.|+++|+|++
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~ 180 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIM 180 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEE
Confidence 889999999999888777778887777777888889999999999987
No 32
>1p9y_A Trigger factor, TF; alpha-beta protein, isomerase; 2.15A {Escherichia coli} SCOP: d.241.2.1 PDB: 1oms_A*
Probab=32.71 E-value=25 Score=28.04 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=34.7
Q ss_pred CceeeeccccccceEEEEeeCCCHHHHHHHhhc---cCccCCCCccch
Q 046037 1 MRISIATNTELSSRFFASKLNPTNNVLLNCAYE---CKLPFLSMASRR 45 (388)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~ay~---~~i~~~g~~~R~ 45 (388)
|.+++-+...+..++=++--+++++++.+++|+ +++..+| ||+
T Consensus 4 M~v~~e~~~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~v~ipG--FRk 49 (121)
T 1p9y_A 4 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDG--LRK 49 (121)
T ss_dssp CEEEEEECSTTEEEEEEEECHHHHHHHHHHHHHHHHTTCCCTT--SCT
T ss_pred ceEEEEECCCcEEEEEEEECHHHHHHHHHHHHHHHHhhCccCC--cCC
Confidence 556666666666777789999999999999999 8999887 354
No 33
>2nsc_A Trigger factor, TF; chaperone; 2.20A {Thermotoga maritima} PDB: 2nsb_A
Probab=31.46 E-value=22 Score=27.77 Aligned_cols=43 Identities=7% Similarity=-0.126 Sum_probs=34.7
Q ss_pred CceeeeccccccceEEEEeeCCCHHHHHHHhhc---cCccCCCCccch
Q 046037 1 MRISIATNTELSSRFFASKLNPTNNVLLNCAYE---CKLPFLSMASRR 45 (388)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~ay~---~~i~~~g~~~R~ 45 (388)
|.+++-+...+..++=++--+++++++.+++|+ +++..+| ||+
T Consensus 1 M~v~~e~~~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~~~ipG--FRk 46 (109)
T 2nsc_A 1 MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPG--FRK 46 (109)
T ss_dssp CEEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHHHTTCCCTT--SCT
T ss_pred CceEEEEcCCCEEEEEEEECHHHHHHHHHHHHHHHhccCCCCC--cCC
Confidence 566666656666677779999999999999999 8999997 455
No 34
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=30.10 E-value=13 Score=35.38 Aligned_cols=51 Identities=24% Similarity=0.334 Sum_probs=41.0
Q ss_pred HHHHHHHHhhhCChhHHHHHHhcCCCCCH--HHHHHHHHHHHHHHHHcCCeEe
Q 046037 134 VAMSVNDIVTSGAKPLFFLDYFATSHLEV--DLAEKVIKGIVDGCQQSDCVLL 184 (388)
Q Consensus 134 Va~nvsDIaa~GA~P~~~ld~l~~~~~~~--e~~~ei~~Gi~~~c~~~g~~lv 184 (388)
...++.++..+||.-+.++.++.+.+.++ ....+.+.-+.+.|+++|+|++
T Consensus 112 ~~~sve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPll 164 (332)
T 3iv3_A 112 VDWSIKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFF 164 (332)
T ss_dssp TTCCHHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred cccCHHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceE
Confidence 34578999999999999888887654322 3567889999999999999977
No 35
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=29.22 E-value=33 Score=33.34 Aligned_cols=33 Identities=12% Similarity=0.133 Sum_probs=27.8
Q ss_pred cceEE-EEeeCCCHHHHHHHhhc--cCccCCCCccc
Q 046037 12 SSRFF-ASKLNPTNNVLLNCAYE--CKLPFLSMASR 44 (388)
Q Consensus 12 ~~~~~-~~~~g~~~~~a~~~ay~--~~i~~~g~~~R 44 (388)
.+|+. |++.|+|.++|++++|+ +.|+|+|+...
T Consensus 383 ~~~~g~v~~~g~~~~ea~~~~~~~~~~i~~~g~~~~ 418 (451)
T 2vpq_A 383 DSMVAKLIIHEPTRDEAIMAGIRALSEFVVLGIDTT 418 (451)
T ss_dssp CCEEEEEEEEESSHHHHHHHHHHHHHTCEEESSCCS
T ss_pred ccccEEEEEEeCCHHHHHHHHHHHHhccEEeCcCCC
Confidence 45654 48999999999999999 99999998743
No 36
>2d3o_1 Trigger factor, TF; ribosome, nascent chain, protein folding, SRP; 3.35A {Deinococcus radiodurans} PDB: 2aar_7
Probab=26.10 E-value=28 Score=27.34 Aligned_cols=42 Identities=14% Similarity=0.022 Sum_probs=27.8
Q ss_pred CceeeeccccccceEEEEeeCCCHHHHHHHhhc---cCccCCCCccch
Q 046037 1 MRISIATNTELSSRFFASKLNPTNNVLLNCAYE---CKLPFLSMASRR 45 (388)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~ay~---~~i~~~g~~~R~ 45 (388)
|.+++-+ ..+..++-++--+++++++.+++|+ +++..+| ||+
T Consensus 1 M~v~~e~-~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~~~ipG--FRk 45 (112)
T 2d3o_1 1 MAELISK-EGNKVEFKVSVPAAEVNRAYDQVWAGLARDVRVPG--FRP 45 (112)
T ss_dssp ----------CCEEEEECCCGGGTHHHHHHHHHHHHTTSCBTT--BCT
T ss_pred CceEEEc-CCcEEEEEEEECHHHHHHHHHHHHHHHHhhCCCCC--cCC
Confidence 5556655 4555566678899999999999999 8999987 465
No 37
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=22.73 E-value=30 Score=32.30 Aligned_cols=48 Identities=15% Similarity=0.298 Sum_probs=37.0
Q ss_pred HHHHHHhhhCChhHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCeEe
Q 046037 136 MSVNDIVTSGAKPLFFLDYFATSHLEVDLAEKVIKGIVDGCQQSDCVLL 184 (388)
Q Consensus 136 ~nvsDIaa~GA~P~~~ld~l~~~~~~~e~~~ei~~Gi~~~c~~~g~~lv 184 (388)
..+.++..+||.-+.++.++... .++....+.++.+.+.|+++|+|++
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d-~~~~~~~~~i~~v~~~~~~~G~p~l 159 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSD-EDAQQRLNMVKEFNELCHSNGLLSI 159 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTT-SCHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred hhHHHHHHcCCCEEEEEEEcCCC-ccHHHHHHHHHHHHHHHHHcCCcEE
Confidence 46778888999877666666532 2356777889999999999999977
No 38
>2hwn_E A kinase binding peptide; PKA, AKAP, dimerization/docking, D/D, regulatory subunit, TR; 1.60A {Rattus norvegicus}
Probab=22.49 E-value=61 Score=18.26 Aligned_cols=20 Identities=15% Similarity=0.353 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHHHHHhhhCC
Q 046037 127 DTIGIDLVAMSVNDIVTSGA 146 (388)
Q Consensus 127 ~~iG~~aVa~nvsDIaa~GA 146 (388)
+..+|+..-|-+||+...+-
T Consensus 2 eemawkiakmiv~dvmqq~~ 21 (26)
T 2hwn_E 2 EELAWKIAKMIVSDVMQQCK 21 (26)
T ss_pred chHHHHHHHHHHHHHHHHHh
Confidence 36789999999999987653
No 39
>2kon_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Chromobacterium violaceum}
Probab=20.50 E-value=25 Score=24.79 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=29.0
Q ss_pred CCCccchhhhh---hhhhhcCCCCCCCCCCcccccccccHHhHH
Q 046037 39 LSMASRRVSVN---RCVLSMSGSGSSTSGGLTYKDSGVDIDAGS 79 (388)
Q Consensus 39 ~g~~~R~Dig~---~~~~~~~~~~~~~~~~~~y~~~gv~~~~~~ 79 (388)
+|-+||.||-. .++-|.-|-.++.+-+-||... -|+++-.
T Consensus 13 pghqyrddirkyvpyalirkvgvpdrtpipttypef-ydleada 55 (82)
T 2kon_A 13 PGHQYRDDIRKYVPYALIRKVGVPDRTPIPTTYPEF-YDLEADA 55 (82)
T ss_dssp CCEEEETTTTEEEECBEEEESSCTTSCCCCBCCSCC-CSSHHHH
T ss_pred CcchhhHHHHHhccHHHHHHhCCCCCCCCCccCcch-hccccch
Confidence 68899999985 4567887877788878888754 4555533
Done!