BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046039
(502 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/502 (75%), Positives = 443/502 (88%), Gaps = 2/502 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
MKDL+KIHA LIKTGLAKD IAASR+LAFCTSPAGDINYAYLVFTQI+ PNLF+WNTIIR
Sbjct: 9 MKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWNTIIR 68
Query: 61 GFSQSSTPRNAILLFIDMLVTSPI-QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
GFSQSSTP NAI LFIDM+ TSP QPQRLTYPS+FKAYAQLGLA +GAQLHGRV+K GL
Sbjct: 69 GFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKLGL 128
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E DQFI NTI+ MY NCGFL EA+ +FD T FDVV WN+MIIGLAKCGEID+SRRLFD
Sbjct: 129 ENDQFIQNTILNMYVNCGFLGEAQRIFDGA-TGFDVVTWNTMIIGLAKCGEIDKSRRLFD 187
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
KM+ RNTVSWNSMISGYVR +F EA+ELF MQE+ IKPSEFTMVSLLNACA LGA+RQ
Sbjct: 188 KMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQ 247
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
GEWIH+++V N F LN+IV+TAIIDMY KCG ++ALQVF + PKKGLSCWNS++ GLAM
Sbjct: 248 GEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLAM 307
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G NEA++LFS L+SSNLKPD++SFI VLTACNH+G V++AKDYF LM+ETYKI+PSIK
Sbjct: 308 SGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSIK 367
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HYSCMVD LGRAGLLEEAE+LI+SMP +PDAIIWGSLLS+CR++GNIEMAKQAAK++ EL
Sbjct: 368 HYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQAAKRVNEL 427
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D NES ++L+SN+YAA FEEA+E+RL +KE +++KEPGCSLIEV+GEVHEFVAGGRL
Sbjct: 428 DPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGEVHEFVAGGRL 487
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP++ ++Y L+DLGL ++EMG
Sbjct: 488 HPRSKDIYHALDDLGLTLKEMG 509
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/497 (74%), Positives = 431/497 (86%), Gaps = 2/497 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
MKDL+KIHAHL+KTGLAK P+A S +LAFC TSP GDINYAYLVFTQI PNLF WNTII
Sbjct: 37 MKDLQKIHAHLLKTGLAKHPLAVSPVLAFCATSPGGDINYAYLVFTQIHSPNLFSWNTII 96
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGFSQSSTP +AI LFIDML+ S +QP RLTYPS+FKAYAQLGLA GAQLHGRV+K GL
Sbjct: 97 RGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFKAYAQLGLAHYGAQLHGRVIKLGL 156
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+FD FI NTIIYMYANCGFLSE F E +FD+VAWNSMI+GLAKCGE+DESR+LFD
Sbjct: 157 QFDPFIRNTIIYMYANCGFLSEMWKAFYE-RMDFDIVAWNSMIMGLAKCGEVDESRKLFD 215
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M RNTVSWNSMISGYVRN + +EAL+LF +MQE+ IKPSEFTMVSLLNA A+LGA++Q
Sbjct: 216 EMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLLNASARLGALKQ 275
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
GEWIH+++ N FELN IV +IIDMYCKCG A QVF P KGLS WN+M+ GLAM
Sbjct: 276 GEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGLAM 335
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG ENEAI+LFS L+ SNL+PD ++F+ VLTACN+SG V++AK+YF+LM++TYKI+PSIK
Sbjct: 336 NGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKTYKIEPSIK 395
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HYSCMVD LGRAGLLEEAE+LIR+MP +PDAIIW SLLSACRKHGN+E+AK+AAK I++L
Sbjct: 396 HYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNVELAKRAAKHIVDL 455
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D N+SCGYVL+SN+YAAS QFEEAME+RL MKE +IEKEPGCSLIEV+GE+HEFVAGGRL
Sbjct: 456 DGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSLIEVNGEIHEFVAGGRL 515
Query: 480 HPKAPEVYLLLNDLGLL 496
HP+A EVY LLN+LG++
Sbjct: 516 HPQAQEVYSLLNELGMM 532
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/495 (70%), Positives = 421/495 (85%), Gaps = 1/495 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
MKDLKKIH+ LIKTGLAKD AASRILAFC SPAGDINYAYLVF QI+ PN+F WNTIIR
Sbjct: 35 MKDLKKIHSQLIKTGLAKDTNAASRILAFCASPAGDINYAYLVFVQIQNPNIFAWNTIIR 94
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GFS+SS P+N+I L+IDML+TSP+QPQRLTYPS+FKA+AQL LA +GAQLHG+++K GLE
Sbjct: 95 GFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEGAQLHGKMIKLGLE 154
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D FI NTI++MY NCGF SEAR +FD +FD+VAWN+MI+G+AKCG +DESRRLFDK
Sbjct: 155 NDSFIRNTILFMYVNCGFTSEARKVFDR-GMDFDIVAWNTMIMGVAKCGLVDESRRLFDK 213
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M RN VSWNSMISGYVRN +F +ALELF++MQ + I+PSEFTMVSLLNACA LGAIRQG
Sbjct: 214 MSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIRQG 273
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
EWIH+++V FELN IVVTAIIDMY KCG ++A+QVF + P++GLSCWNSM+ GLAMN
Sbjct: 274 EWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAMN 333
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G ENEA++LFS LQSS+L+PD +SFIAVLTAC+H+G V++AKDYF LM + YKIKP IKH
Sbjct: 334 GQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGIKH 393
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+SCMVD LGRAGLLEEAE+LIRSM DPDAIIWGSLL +C K+GNI+MAK+AA +IEL+
Sbjct: 394 FSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKYGNIKMAKRAANHLIELN 453
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ES +VL++N YAA+ FEEA++ERL +KE I KEPGCS IEV GEVHEFVAGGR H
Sbjct: 454 PSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCIEVGGEVHEFVAGGRAH 513
Query: 481 PKAPEVYLLLNDLGL 495
P+ E+Y +L+ L L
Sbjct: 514 PEIKEIYRVLDVLTL 528
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/499 (66%), Positives = 412/499 (82%), Gaps = 2/499 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
MKDL+KIHAH+IKTGLA +AASR+L FC S +GDINYAYL+FT I PNL+ WNTIIR
Sbjct: 38 MKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSSGDINYAYLLFTTIPSPNLYCWNTIIR 97
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GFS+SSTP AI LF+DML +S + PQRLTYPS+FKAYAQLG DGAQLHGRVVK GLE
Sbjct: 98 GFSRSSTPHLAISLFVDMLCSS-VLPQRLTYPSVFKAYAQLGAGYDGAQLHGRVVKLGLE 156
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
DQFI NTIIYMYAN G LSEAR +FDE+ + DVVA NSMI+GLAKCGE+D+SRRLFD
Sbjct: 157 KDQFIQNTIIYMYANSGLLSEARRVFDEL-VDLDVVACNSMIMGLAKCGEVDKSRRLFDN 215
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +R V+WNSMISGYVRN + EALELFR+MQ + ++PSEFTMVSLL+ACA LGA++ G
Sbjct: 216 MPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLSACAHLGALKHG 275
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
EW+H+++ FELN IV+TAIIDMYCKCG +A++VF P +GLSCWNS++ GLA+N
Sbjct: 276 EWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSCWNSIIIGLALN 335
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
GYE +AI+ FS L++S+LKPD++SFI VLTAC + G V +A+DYF+LM Y+I+PSIKH
Sbjct: 336 GYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNKYEIEPSIKH 395
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+CMV+ LG+A LLEEAE+LI+ MP D IIWGSLLS+CRKHGN+E+AK+AA+++ EL+
Sbjct: 396 YTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHGNVEIAKRAAQRVCELN 455
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+++ GY+LMSN+ AAS QFEEAME+R+LM+E EKEPGCS IE+ GEVHEF+AGGRLH
Sbjct: 456 PSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCSSIELYGEVHEFLAGGRLH 515
Query: 481 PKAPEVYLLLNDLGLLIQE 499
PKA E+Y LLND +Q+
Sbjct: 516 PKAREIYYLLNDSSFALQD 534
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/503 (64%), Positives = 409/503 (81%), Gaps = 2/503 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M+DL++ HAHLIK+G A + AASRILAFC SP G+++YAYLVF Q++ PNLF WNT+IR
Sbjct: 37 MRDLQQFHAHLIKSGQAIESFAASRILAFCASPLGNMDYAYLVFLQMQNPNLFSWNTVIR 96
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GFSQSS P+ A+ LFIDMLV+S ++PQRLTYPS+FKAY+QLGLA DGAQLHGR++K GL+
Sbjct: 97 GFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQ 156
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
FD FI NTI+YMYA GFLSEAR +F++ + EFDVV+WNSMI+GLAKCGEIDESR+LFDK
Sbjct: 157 FDPFIRNTILYMYATGGFLSEARRIFNQ-EMEFDVVSWNSMILGLAKCGEIDESRKLFDK 215
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +N +SWNSMI GYVRN FKEAL+LF +MQE+ I+PSEFTMVSLLNA A++GA+RQG
Sbjct: 216 MPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQG 275
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
WIH ++ N +LN IVVTAIIDMYCKCG ALQVF +P + LS WNSM+FGLA+N
Sbjct: 276 VWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVN 335
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G E EAI +F L+SS+LKPD ISF+AVLTACNH V++ ++F+ M TY+I+PSIKH
Sbjct: 336 GCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSRMKNTYRIEPSIKH 395
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+ MVD + RAG LEEAE+ I++MP + DAIIWG LLSACR +GN EMAK+AA+++ ELD
Sbjct: 396 YNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSACRIYGNTEMAKRAAEKVNELD 455
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA-GGRL 479
E+ GYVLM+N++A F AME+R+ M+ K+EKEPG S IEVD EVHEF+A GGRL
Sbjct: 456 PEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEPGGSFIEVDEEVHEFIAGGGRL 515
Query: 480 HPKAPEVYLLLNDLGLLIQEMGS 502
H KA E+Y++L LG+++Q+ G+
Sbjct: 516 HRKAQEIYIVLGQLGVMLQDKGA 538
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/503 (64%), Positives = 402/503 (79%), Gaps = 5/503 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +I+ H+IKTGL +PIA++R L FC SP+G+INYAY +F ++ PNL+ WNTIIR
Sbjct: 41 INHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTIIR 100
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
FS+SSTP+ AI LF+DML S IQPQ LTYPS+FKAYAQLG A GAQLHGRVVK GL+
Sbjct: 101 AFSRSSTPQFAISLFVDMLY-SQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQ 159
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF---DVVAWNSMIIGLAKCGEIDESRRL 177
DQFI NTIIYMYAN G +SEAR +FD E DVVA NSMI+G AKCGEIDESR L
Sbjct: 160 NDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNL 219
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD M++R +VSWNSMISGYVRN K EALELF +MQ + + SEFTMVSLLNACA LGA+
Sbjct: 220 FDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGAL 279
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
+ G+W+H+++ N FELN IVVTAIIDMYCKCG E A++VF T P++GLSCWNS++ GL
Sbjct: 280 QHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGL 339
Query: 298 AMNGYENEAIKLFSGLQSSNL-KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
AMNG+E EA + FS L+SS L KPD +SFI VLTAC H G +N+A+DYF LM Y+I+P
Sbjct: 340 AMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEP 399
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
SIKHY+C+VD LG+AGLLEEAE+LI+ MP PDAIIWGSLLS+CRKH N+++A++AA+++
Sbjct: 400 SIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRV 459
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
EL+ +++ GYVLMSN++AAS +FEEA+E+RLLMKE EKEPGCS IE+ GEVHEF+AG
Sbjct: 460 YELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFIAG 519
Query: 477 GRLHPKAPEVYLLLNDLGLLIQE 499
GRLHPK E+Y LLND Q+
Sbjct: 520 GRLHPKTQEIYHLLNDSSFAFQD 542
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/494 (64%), Positives = 393/494 (79%), Gaps = 2/494 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M++LK+IHA+LIKTGL D +AASR+LAFC + D NYAYLVFT+I N F+WNTIIR
Sbjct: 38 MRELKQIHANLIKTGLISDTVAASRVLAFCCASPSDRNYAYLVFTRINHKNPFVWNTIIR 97
Query: 61 GFSQSSTPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
GFS+SS P AI +FIDML +SP ++PQRLTYPS+FKAYA LGLARDG QLHGRV+K+GL
Sbjct: 98 GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQLHGRVIKEGL 157
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D FI NT+++MY CG L EA +F + FDVVAWNS+I+GLAKCG ID++++LFD
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLVEAWRLFVGM-MGFDVVAWNSIIMGLAKCGLIDQAQKLFD 216
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M RN VSWNSMISG+VRN +FK+ALE+FREMQE+++KP FTMVSLLNACA LGA Q
Sbjct: 217 EMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G WIH ++V N FELN+IV+TA+IDMYCKCGC E L+VF P K LSCWNSM+ GLA
Sbjct: 277 GRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSMILGLAN 336
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG E A+ LF L+ + L+PD +SFI VLTAC HSG+V++A ++F LM E Y I+PSIK
Sbjct: 337 NGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYMIEPSIK 396
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY+CMV+ LG AGLL+EAE LI+ MP + D IIW SLL+ACRK+GN+EMAK+AA + L
Sbjct: 397 HYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNVEMAKRAANCLKNL 456
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D +E+CGYVLMSN YA+ FEEA+E+RLLMKE ++EKE GCS IEVD EVHEFV+ G+
Sbjct: 457 DPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFVSCGKK 516
Query: 480 HPKAPEVYLLLNDL 493
HPK+ E+Y LL L
Sbjct: 517 HPKSTEIYSLLGIL 530
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/494 (63%), Positives = 391/494 (79%), Gaps = 2/494 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M++LK+IHA LIKTGL D + ASR+LAFC + D+NYAYLVFT+I N F+WNTIIR
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIR 97
Query: 61 GFSQSSTPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
GFS+SS P AI +FIDML +SP ++PQRLTYPS+FKAY +LG ARDG QLHG V+K+GL
Sbjct: 98 GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D FI NT+++MY CG L EA +F + FDVVAWNSMI+G AKCG ID+++ LFD
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGM-IGFDVVAWNSMIMGFAKCGLIDQAQNLFD 216
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M RN VSWNSMISG+VRN +FK+AL++FREMQE+++KP FTMVSLLNACA LGA Q
Sbjct: 217 EMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G WIH ++V N FELN+IVVTA+IDMYCKCGC E L VF PKK LSCWNSM+ GLA
Sbjct: 277 GRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG+E A+ LFS L+ S L+PD +SFI VLTAC HSG+V++A ++F LM E Y I+PSIK
Sbjct: 337 NGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY+ MV+ LG AGLLEEAE LI++MP + D +IW SLLSACRK GN+EMAK+AAK + +L
Sbjct: 397 HYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKL 456
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D +E+CGYVL+SN YA+ FEEA+E+RLLMKE ++EKE GCS IEVD EVHEF++ G
Sbjct: 457 DPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGT 516
Query: 480 HPKAPEVYLLLNDL 493
HPK+ E+Y LL+ L
Sbjct: 517 HPKSAEIYSLLDIL 530
>gi|242033621|ref|XP_002464205.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
gi|241918059|gb|EER91203.1| hypothetical protein SORBIDRAFT_01g014070 [Sorghum bicolor]
Length = 521
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/478 (46%), Positives = 307/478 (64%), Gaps = 5/478 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M L+++HA L+K+GLAKDPIAASR +AFC P D++YA + +PN F+WNT+IR
Sbjct: 46 MAHLRQLHAALVKSGLAKDPIAASRAVAFCAGPGRDVSYAERLVRHHPRPNSFMWNTVIR 105
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S + P A+ LF+DML SP P+R T PSL AYA+LG A DGA LHG +K GL
Sbjct: 106 ALSDGARPEAAVALFVDML-GSPTPPERRTLPSLLAAYARLGRAGDGAALHGMALKLGLA 164
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ N I MYA+C EA +F + EFD VA NS I+ LA+ G +DE+R +FD
Sbjct: 165 GDAYVRNATIAMYASCARADEALALFGQC-PEFDAVACNSAIVALARAGRVDEARAVFDG 223
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R +W++M+S Y R + EAL LF MQ ++P+ +VS+L CA LGA+ QG
Sbjct: 224 MPERTVATWSAMVSAYARAARCGEALALFSAMQADGVEPNANVLVSVLGCCASLGALDQG 283
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG---LSCWNSMVFGL 297
W+H ++ + +N +VVTA++DMYCKCG + A QVF+ +G LS WNSM+ GL
Sbjct: 284 AWVHAYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGSAKLSSWNSMMQGL 343
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A++G EA+ LFS L+S L PD ++FIAVLTA H+G ++A+ F M + ++P
Sbjct: 344 AVHGQWREAVALFSELRSYGLSPDNVTFIAVLTAYGHAGMPDEAQAAFASMATEHSVEPG 403
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY C+VDAL RAG L EAE IRSMP PDA +WG+LLS CR HG+ E+ +AA++ +
Sbjct: 404 IEHYGCLVDALARAGRLREAEDAIRSMPMAPDAAVWGALLSGCRLHGDAELGARAAREAV 463
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
D +S YVL +++ A R M+E + K PGCS+IEV+G VHEFV+
Sbjct: 464 RCDPRDSGAYVLAASVLARGGNPGRGAGVRGRMREAGVGKVPGCSMIEVNGVVHEFVS 521
>gi|414871822|tpg|DAA50379.1| TPA: hypothetical protein ZEAMMB73_401482 [Zea mays]
Length = 522
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/478 (46%), Positives = 308/478 (64%), Gaps = 5/478 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M L+++HA L+K+GLAKDPIAASR +AFC P D+ YA + +PN F+WNT+IR
Sbjct: 47 MAHLRQLHAALVKSGLAKDPIAASRAVAFCAGPGRDVLYAERLVRHHPRPNSFMWNTVIR 106
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S + P A+ LF+DML +SP P R ++PSL AYA+LG A DG LHG +K GL
Sbjct: 107 ALSDGARPDAAVALFVDML-SSPTPPDRRSFPSLLAAYARLGRAGDGEALHGMALKLGLA 165
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ N I MYA+CG EA +F + E DVVA NS+I+ LA+ G +DE+R +FD
Sbjct: 166 GDAYVRNATIAMYASCGRADEALALFGQC-PELDVVACNSVIVALARAGRVDEARSVFDA 224
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R +W++M+S Y R + EAL LF MQ ++P+ +VS+L CA LGA+ QG
Sbjct: 225 MPERTVATWSAMVSAYARAARCSEALALFSAMQADGMEPNANVLVSVLGCCASLGALVQG 284
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL---SCWNSMVFGL 297
W+H ++ + +N +VVTA++DMYCKCG + A QVF+ +GL S WNSM+ GL
Sbjct: 285 AWVHEYIDRHGVAMNALVVTALVDMYCKCGSVDDARQVFDAARSQGLAKLSSWNSMMQGL 344
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A++G EA+ LFS L+S L PD ++FIAVLTA HSG ++A+ F M+ + ++P
Sbjct: 345 AVHGQWREAVALFSELKSYGLSPDNVTFIAVLTAYGHSGMPDEAQAAFASMSSEHGVEPG 404
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY C+VDAL RAG L EAE IR+MP PDA IWG+LLS CR HG+ E+ +AA++ +
Sbjct: 405 IEHYGCLVDALARAGRLREAEDAIRAMPMAPDAAIWGALLSGCRLHGDAELGARAAREAV 464
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
D +S YVL +++ A R M+E + K PG S+IEV+G VHEFV+
Sbjct: 465 RCDPRDSGAYVLAASVLARGGDPGRGAGIRGRMREAGVGKVPGSSMIEVNGVVHEFVS 522
>gi|326492712|dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506700|dbj|BAJ91391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/478 (47%), Positives = 306/478 (64%), Gaps = 5/478 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M L+++HA L+K+GL+KDPIAASR +AFC D YA + +PN F+WNT IR
Sbjct: 45 MAHLRQLHAALVKSGLSKDPIAASRAVAFCAGEGRDAAYAARIVRYHPRPNSFMWNTAIR 104
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S P A+ LF+DML SP P+R T+PSLF AYA+LG A DGA LHG V+K GL
Sbjct: 105 ALSDGPGPDAAVALFVDML-RSPTPPERRTFPSLFAAYARLGRADDGAALHGMVLKLGLA 163
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + NT I MYA+ G EA +F + FDVVA NS I+ L++ G +DE+R +FD
Sbjct: 164 GDAYTRNTTIAMYASSGRADEALALFGQCQV-FDVVACNSAIVALSRAGRVDEARAVFDG 222
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M SR +W++M+S Y R +F +A++LF MQ ++P+ +VS+L CA LGA+ QG
Sbjct: 223 MPSRTVATWSAMVSAYSRAARFHDAVDLFSAMQVDGVEPNANVLVSVLGCCASLGALEQG 282
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL---SCWNSMVFGL 297
W+H ++ +N +VV A++DMYCKCG +A QVF+T +GL S WN+M+ GL
Sbjct: 283 AWVHAYIDKQDVGMNALVVIALVDMYCKCGSIHKARQVFDTSRSQGLAKLSSWNAMMLGL 342
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A +G EA+ LFS L+S L+PD ++FIA+L A HSG ++AK F M Y + P
Sbjct: 343 AAHGQCQEALALFSELESYGLRPDNVTFIAMLMAYGHSGMADEAKALFASMAREYGVTPG 402
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY C+VDAL RAG L EAE IR+MP PDA IWG+LLS CR HG+ E +AA+ +
Sbjct: 403 IEHYGCLVDALARAGRLREAEDTIRAMPMKPDAAIWGALLSGCRLHGDAEAGARAARGAV 462
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
E D +S YVL +++ A + + R M+E + K PGCS+IEVDG VHEFV+
Sbjct: 463 ECDPRDSGAYVLAASVLARDGEVGRGLGVRGKMREEGVAKVPGCSMIEVDGVVHEFVS 520
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 108/268 (40%), Gaps = 9/268 (3%)
Query: 78 MLVTSP-IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANC 136
+L +SP I ++P+L + Q QLH +VK GL D + + A
Sbjct: 18 LLPSSPSISAFLASHPALTLLHTQCATMAHLRQLHAALVKSGLSKDPIAASRAVAFCAGE 77
Query: 137 GFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV----SWNSM 192
G + + WN+ I L+ D + LF M+ T ++ S+
Sbjct: 78 GRDAAYAARIVRYHPRPNSFMWNTAIRALSDGPGPDAAVALFVDMLRSPTPPERRTFPSL 137
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
+ Y R + + L + + + +T + + A G R E + F C
Sbjct: 138 FAAYARLGRADDGAALHGMVLKLGLAGDAYTRNTTIAMYASSG--RADEALALF--GQCQ 193
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
+ + + I + G + A VF+ +P + ++ W++MV + ++A+ LFS
Sbjct: 194 VFDVVACNSAIVALSRAGRVDEARAVFDGMPSRTVATWSAMVSAYSRAARFHDAVDLFSA 253
Query: 313 LQSSNLKPDYISFIAVLTACNHSGKVNQ 340
+Q ++P+ ++VL C G + Q
Sbjct: 254 MQVDGVEPNANVLVSVLGCCASLGALEQ 281
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/502 (44%), Positives = 332/502 (66%), Gaps = 3/502 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +LK+ H+ +I+ GL+ D A R++ FC S +GD+NYA VF +I P+ +I+NTI
Sbjct: 33 MAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIF 92
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+ + RN I ++ ML S + P + TYP L +A +G Q+H V+K G
Sbjct: 93 RGYLRWQLARNCIFMYSRMLHKS-VSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGF 151
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F N +I+MY N L +AR +FD + + DVV+W S+I G ++ G +D++R +F+
Sbjct: 152 GADGFSLNNLIHMYVNFQSLEQARRVFDNM-PQRDVVSWTSLITGYSQWGFVDKAREVFE 210
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M RN+VSWN+MI+ YV++ + EA LF M+ +N+ +F S+L+AC LGA+ Q
Sbjct: 211 LMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQ 270
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+WIH ++ + EL++ + T +IDMYCKCGC E+A +VFN +P+KG+S WN M+ GLAM
Sbjct: 271 GKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAM 330
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G AI+LF ++ + PD I+F+ VL+AC HSG V + K YF MTE +KP ++
Sbjct: 331 HGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGME 390
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
H+ CMVD LGRAGLLEEA KLI MP +PDA + G+L+ ACR HGN E+ +Q K++IEL
Sbjct: 391 HFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIEL 450
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ + S YVL++NLYA++ ++E+ + R LM + ++K PG S+IE + V EF+AGGR
Sbjct: 451 EPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRA 510
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+A E+Y L+++ I+ +G
Sbjct: 511 HPQAKEIYAKLDEILETIRSIG 532
>gi|357120906|ref|XP_003562165.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Brachypodium distachyon]
Length = 529
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 215/482 (44%), Positives = 306/482 (63%), Gaps = 8/482 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M L+++H L+K+GLAKDPIAASR++AF D+ YA + +PN F+WNT IR
Sbjct: 49 MARLRQLHGALVKSGLAKDPIAASRVVAFLAGKGRDVAYAARLVRHHPRPNAFMWNTAIR 108
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD----GAQLHGRVVK 116
S P A+ LF+DML SP P+R T+PSLF +YA+LG+ D GA LHG V+K
Sbjct: 109 ALSDGPGPDAAVALFLDML-RSPTPPERRTFPSLFASYARLGVRADDDGAGAALHGMVLK 167
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
GL D ++ N++I MYA+ G EA L++ + FDVVA NS I+ L + G +DE+R
Sbjct: 168 LGLAGDAYVRNSMIAMYASWGRADEALLLYGQCGQAFDVVACNSAIVALTRAGRVDEARE 227
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD M +R +W++M+S Y R + ++A+ELF MQ ++P+ +VS+L CA LGA
Sbjct: 228 VFDAMPARTVATWSAMVSAYSRAARCQDAVELFSAMQASGVEPNANVLVSVLGCCAALGA 287
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL---SCWNSM 293
+ QG W+H ++ + +N +VVTA++DMYCKCG +A VF+ +GL S WN+M
Sbjct: 288 LEQGAWVHAYIDKHGVAMNALVVTALVDMYCKCGSIHKARHVFDASRSQGLAKLSSWNAM 347
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ GLA++G EA+ LFS L++ L PD ++FI +L A HSG ++AK F+ M Y
Sbjct: 348 MLGLAVHGQCQEALALFSELETYGLSPDNVTFITILMAYGHSGMADEAKALFSAMEREYA 407
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
+ P I+HY C+VDAL RAG L EAE +IR+MP PD IWG+LLS CR HG+ E +AA
Sbjct: 408 VTPGIEHYGCLVDALARAGRLGEAEDVIRTMPMRPDTAIWGALLSGCRLHGDAEAGARAA 467
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
+E D +S YVL +++ A + + R M+ + K PGCS+IEV+G VHEF
Sbjct: 468 SGAMECDPQDSGAYVLAASVLARDGEVGAGVSVRERMRVEGVAKVPGCSMIEVNGVVHEF 527
Query: 474 VA 475
V+
Sbjct: 528 VS 529
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/511 (44%), Positives = 334/511 (65%), Gaps = 20/511 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTII 59
M LK+IH+ IKTG+ +PI ++IL+FC S GD+ YA +F I +P++F WN +
Sbjct: 27 MYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMF 86
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+G+S+ + P+ + L+++ML + ++P TYP LFK + + + G +LH VVK GL
Sbjct: 87 KGYSRIACPKLGVSLYLEMLERN-VKPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGL 145
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI----------------- 162
+ + F HN +I MY+ CG + AR +FD + + DVV WN+MI
Sbjct: 146 DSNVFAHNALINMYSLCGLIDMARGIFD-MSCKSDVVTWNAMISGYNRIKKDVISWTAIV 204
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G G++D +R+ F KM R+ VSW +MI GY+R +KEAL LFREMQ IKP EF
Sbjct: 205 TGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEF 264
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
TMVS+L ACA+LGA+ GEWI ++ N + +T V A+IDMY KCG E AL +FNT+
Sbjct: 265 TMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTL 324
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
P++ W +MV GLA+NG EA+ +FS + +++ PD ++++ VL+AC H+G V++ K
Sbjct: 325 PQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGK 384
Query: 343 DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
+F MT + I+P+I HY CMVD LG+AG L+EA ++I++MP P++I+WG+LL ACR
Sbjct: 385 KFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRI 444
Query: 403 HGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS 462
H + EMA++A +QI+EL+ N YVL N+YAA ++++ E R +M + I+K PGCS
Sbjct: 445 HKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCS 504
Query: 463 LIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
LIE++G VHEFVAG + HP+ E+Y LN +
Sbjct: 505 LIEMNGIVHEFVAGDQSHPQTKEIYGKLNKM 535
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/506 (44%), Positives = 326/506 (64%), Gaps = 7/506 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKP-NLFIWNTI 58
MK K+ H LI GL P + I++F P+GDI+YA L+ + P +F++NT
Sbjct: 1 MKQFKEAHTQLIINGLTHPPPSLRPIISFSALDPSGDIDYALLLLLRTSTPPTVFLFNTT 60
Query: 59 IRGFSQSSTPRN---AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
IRGFS++ P + ++LLF+ M V S + P T+ LF+ + G Q HG V+
Sbjct: 61 IRGFSRARRPGSLLSSVLLFVRMGVLS-LAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVI 119
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K E D F+ N+II Y+ CG L++AR +FDE +E DVV+WNSMI G + G I E+
Sbjct: 120 KNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDE-SSELDVVSWNSMIDGCIRNGNILEAL 178
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
LF KM RN +SWN MISGY +N + KEAL LFREMQ + +P+ +VS+L+AC++LG
Sbjct: 179 SLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLG 238
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A+ G W+H ++ C +++I+ A+IDMY KCG + A+Q F+T K+ +S + + +
Sbjct: 239 ALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAIS 298
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
GLAMNG EA++LF ++ + PD +S+IAVL AC+H+G V + YF M++ + I+
Sbjct: 299 GLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIR 358
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P + HY+CMVD LGRAGLLEEAEK + SMP PD +IWG+LL ACR +GN EM ++
Sbjct: 359 PELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSL 418
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
++E D+N Y+L+SN+YA S + E+A + R M+ K+++ PGCSLIEV G VHEF +
Sbjct: 419 LVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFS 478
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQEMG 501
G R H K E+YL+ ++ I++ G
Sbjct: 479 GDRSHEKTEEIYLMWEEIVKEIKKFG 504
>gi|218193370|gb|EEC75797.1| hypothetical protein OsI_12731 [Oryza sativa Indica Group]
Length = 523
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/478 (45%), Positives = 304/478 (63%), Gaps = 5/478 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M L+++HA L+K+GLA+DPIAASR +AFC D YA + +PN F+WNT IR
Sbjct: 48 MAHLRQLHAALVKSGLARDPIAASRAVAFCAGDGRDAAYAARLVRHHPRPNAFMWNTAIR 107
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ P A+ LF+DML SP P+R T+PSLF AYA+LG A DGA LHG VVK GL
Sbjct: 108 ALADGPGPGAAVALFVDML-GSPTPPERRTFPSLFAAYARLGRAGDGAGLHGMVVKLGLG 166
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ N++I MYA+ G EA + + FD VA NS I+ LA+ G +DE+R +FD
Sbjct: 167 GDAYVRNSVIAMYASRGAADEAIALLARCEA-FDAVACNSAIVALARAGRVDEARAVFDG 225
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +R +W++M+S Y R+ + +A+ELF MQ + ++P+ +VS+L CA LGA+ QG
Sbjct: 226 MPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVSVLGCCASLGALEQG 285
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG---LSCWNSMVFGL 297
W+H ++ + +N +VVTA++DMYCKCG +A +VF+ +G LS WNSM+ G
Sbjct: 286 AWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWNSMMLGH 345
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A++G EA LFS L+ L+PD ++FIA+L A HSG ++AK M + + P
Sbjct: 346 AVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKAVLASMASEHGVVPG 405
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
++HY C+VDAL RAG L EAE +I +MP PDA +WG+LLS CR HG+ E A +AA++ +
Sbjct: 406 VEHYGCLVDALARAGRLREAEGVIAAMPVAPDAAVWGALLSGCRLHGDAEAAARAAREAV 465
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
D +S YVL ++ A + R M+E + K PGCS+IEVDG VHEFV+
Sbjct: 466 RCDPRDSGAYVLAASALARGGEARRGAAVRGRMREEGVGKVPGCSMIEVDGVVHEFVS 523
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 125/349 (35%), Gaps = 65/349 (18%)
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
++P+L + Q QLH +VK GL D + + A D
Sbjct: 34 SHPALTLLHTQCASMAHLRQLHAALVKSGLARDPIAASRAVAFCAG-----------DGR 82
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
D + + RL N WN+ I A+ LF
Sbjct: 83 DAAY--------------------AARLVRHHPRPNAFMWNTAIRALADGPGPGAAVALF 122
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
+M P T SL A A+LG G +H +V + V ++I MY
Sbjct: 123 VDMLGSPTPPERRTFPSLFAAYARLGRAGDGAGLHGMVVKLGLGGDAYVRNSVIAMYASR 182
Query: 270 GCPERAL-------------------------------QVFNTVPKKGLSCWNSMVFGLA 298
G + A+ VF+ +P + ++ W++MV +
Sbjct: 183 GAADEAIALLARCEAFDAVACNSAIVALARAGRVDEARAVFDGMPARTVATWSAMVSAYS 242
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+ ++A++LFS +Q+ ++P+ ++VL C G + Q + + + + +
Sbjct: 243 RDSRCHDAVELFSAMQAEGVEPNANVLVSVLGCCASLGALEQGA-WVHAYIDKHDVAMNA 301
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII--WGSLLSACRKHGN 405
+ +VD + G + +A ++ + S A + W S++ HG
Sbjct: 302 LVVTALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWNSMMLGHAVHGQ 350
>gi|41469497|gb|AAS07282.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 476
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/478 (45%), Positives = 303/478 (63%), Gaps = 5/478 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M L+++HA L+K+GLA+DPIAASR +AFC D YA + +PN F+WNT IR
Sbjct: 1 MAHLRQLHAALVKSGLARDPIAASRAVAFCAGDGRDAAYAARLVRHHPRPNAFMWNTAIR 60
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ P A+ LF+DML SP P+R T+PSLF AYA+LG A DGA LHG VVK GL
Sbjct: 61 ALADGPGPGAAVALFVDML-GSPTPPERRTFPSLFAAYARLGRAGDGAGLHGMVVKLGLG 119
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ N++I MYA+ G EA + + FD VA NS I+ LA+ G +DE+R +FD
Sbjct: 120 GDAYVRNSVIAMYASRGAADEAIALLARCEA-FDAVACNSAIVALARAGRVDEARAVFDG 178
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +R +W++M+S Y R+ + +A+ELF MQ + ++P+ +VS+L CA LGA+ QG
Sbjct: 179 MPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVSVLGCCASLGALEQG 238
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG---LSCWNSMVFGL 297
W+H ++ + +N +VVTA++DMYCKCG +A +VF+ +G LS WNSM+ G
Sbjct: 239 AWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWNSMMLGH 298
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A++G EA LFS L+ L+PD ++FIA+L A HSG ++AK M + + P
Sbjct: 299 AVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKAVLASMASEHGVVPG 358
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
++HY C+VDAL RAG L EAE I +MP PDA +WG+LLS CR HG+ E A +AA++ +
Sbjct: 359 VEHYGCLVDALARAGRLREAEGAIAAMPVAPDAAVWGALLSGCRLHGDAEAAARAAREAV 418
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
D +S YVL ++ A + R M+E + K PGCS+IEVDG VHEFV+
Sbjct: 419 RCDPRDSGAYVLAASALARGGEARRGAAVRGRMREEGVGKVPGCSMIEVDGVVHEFVS 476
>gi|108709982|gb|ABF97777.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 523
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/478 (45%), Positives = 303/478 (63%), Gaps = 5/478 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M L+++HA L+K+GLA+DPIAASR +AFC D YA + +PN F+WNT IR
Sbjct: 48 MAHLRQLHAALVKSGLARDPIAASRAVAFCAGDGRDAAYAARLVRHHPRPNAFMWNTAIR 107
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ P A+ LF+DML SP P+R T+PSLF AYA+LG A DGA LHG VVK GL
Sbjct: 108 ALADGPGPGAAVALFVDML-GSPTPPERRTFPSLFAAYARLGRAGDGAGLHGMVVKLGLG 166
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ N++I MYA+ G EA + + FD VA NS I+ LA+ G +DE+R +FD
Sbjct: 167 GDAYVRNSVIAMYASRGAADEAIALLARCEA-FDAVACNSAIVALARAGRVDEARAVFDG 225
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +R +W++M+S Y R+ + +A+ELF MQ + ++P+ +VS+L CA LGA+ QG
Sbjct: 226 MPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVSVLGCCASLGALEQG 285
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG---LSCWNSMVFGL 297
W+H ++ + +N +VVTA++DMYCKCG +A +VF+ +G LS WNSM+ G
Sbjct: 286 AWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWNSMMLGH 345
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A++G EA LFS L+ L+PD ++FIA+L A HSG ++AK M + + P
Sbjct: 346 AVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKAVLASMASEHGVVPG 405
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
++HY C+VDAL RAG L EAE I +MP PDA +WG+LLS CR HG+ E A +AA++ +
Sbjct: 406 VEHYGCLVDALARAGRLREAEGAIAAMPVAPDAAVWGALLSGCRLHGDAEAAARAAREAV 465
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
D +S YVL ++ A + R M+E + K PGCS+IEVDG VHEFV+
Sbjct: 466 RCDPRDSGAYVLAASALARGGEARRGAAVRGRMREEGVGKVPGCSMIEVDGVVHEFVS 523
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 125/349 (35%), Gaps = 65/349 (18%)
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
++P+L + Q QLH +VK GL D + + A D
Sbjct: 34 SHPALTLLHTQCASMAHLRQLHAALVKSGLARDPIAASRAVAFCAG-----------DGR 82
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
D + + RL N WN+ I A+ LF
Sbjct: 83 DAAY--------------------AARLVRHHPRPNAFMWNTAIRALADGPGPGAAVALF 122
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
+M P T SL A A+LG G +H +V + V ++I MY
Sbjct: 123 VDMLGSPTPPERRTFPSLFAAYARLGRAGDGAGLHGMVVKLGLGGDAYVRNSVIAMYASR 182
Query: 270 GCPERAL-------------------------------QVFNTVPKKGLSCWNSMVFGLA 298
G + A+ VF+ +P + ++ W++MV +
Sbjct: 183 GAADEAIALLARCEAFDAVACNSAIVALARAGRVDEARAVFDGMPARTVATWSAMVSAYS 242
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+ ++A++LFS +Q+ ++P+ ++VL C G + Q + + + + +
Sbjct: 243 RDSRCHDAVELFSAMQAEGVEPNANVLVSVLGCCASLGALEQGA-WVHAYIDKHDVAMNA 301
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII--WGSLLSACRKHGN 405
+ +VD + G + +A ++ + S A + W S++ HG
Sbjct: 302 LVVTALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWNSMMLGHAVHGQ 350
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/502 (43%), Positives = 327/502 (65%), Gaps = 3/502 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSP-AGDINYAYLVFTQIKKPNLFIWNTII 59
M++L++IH ++KTGL D I AS++LAFC SP +G + YA VF +I +PN F+WNT+I
Sbjct: 31 MEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMI 90
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S S P A+LL+ ML S + T+P L KA + + + + Q+H ++K G
Sbjct: 91 RGYSNSKEPEEALLLYHHMLYHS-VPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGF 149
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ + N+++ +Y+ G + ARL+FD+VD + D V+WNSMI G KCGEI+ + +F+
Sbjct: 150 GSEIYTTNSLLNVYSKSGDIKSARLLFDQVD-QRDTVSWNSMIDGYTKCGEIEMAYEIFN 208
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M RN +SW SMISG V K KEAL LF MQ IK +VS L ACA LG + Q
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQ 268
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+WIH ++ + E++ I+ +IDMY KCG E A++VF + +KG+S W +M+ G A+
Sbjct: 269 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 328
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G EA++ F +Q++ ++P+ ++F +LTAC+H+G V++AK F M + KPSI+
Sbjct: 329 HGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIE 388
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAGLL+EAE+LI +MP P+A IWG+LL+AC HGN+E+ KQ K +I++
Sbjct: 389 HYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQV 448
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D Y+ +++++AA+ ++ +A R MKE + K PGCS+I V+G HEF+AG
Sbjct: 449 DPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDES 508
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+ E+ +L + ++E G
Sbjct: 509 HPQIKEIDHMLEQIVERLREEG 530
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/502 (43%), Positives = 326/502 (64%), Gaps = 3/502 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSP-AGDINYAYLVFTQIKKPNLFIWNTII 59
M++L++IH ++KTGL D I AS++LAFC SP +G + YA VF +I +PN F+WNT+I
Sbjct: 31 MEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMI 90
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S S P A+LL+ ML S + T+P L KA + + + Q+H ++K G
Sbjct: 91 RGYSNSKEPEEALLLYHHMLYHS-VPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGF 149
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ + N+++ +Y+ G + ARL+FD+VD + D V+WNSMI G KCGEI+ + +F+
Sbjct: 150 GSEIYTTNSLLNVYSKSGDIKSARLLFDQVD-QRDTVSWNSMIDGYTKCGEIEMAYEIFN 208
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M RN +SW SMISG V K KEAL LF MQ IK +VS L ACA LG + Q
Sbjct: 209 HMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQ 268
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+WIH ++ + E++ I+ +IDMY KCG E A++VF + +KG+S W +M+ G A+
Sbjct: 269 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 328
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G EA++ F +Q++ ++P+ ++F +LTAC+H+G V++AK F M + KPSI+
Sbjct: 329 HGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIE 388
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAGLL+EAE+LI +MP P+A IWG+LL+AC HGN+E+ KQ K +I++
Sbjct: 389 HYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQV 448
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D Y+ +++++AA+ ++ +A R MKE + K PGCS+I V+G HEF+AG
Sbjct: 449 DPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDES 508
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+ E+ +L + ++E G
Sbjct: 509 HPQIKEIDHMLEQIVERLREEG 530
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/508 (41%), Positives = 329/508 (64%), Gaps = 18/508 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSP---AGDINYAYLVFTQIKKPNLFIWNT 57
++DL +IHA IK+G +D +AA+ IL FC + D++YA+ +F Q+ + N F WNT
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 58 IIRGFSQSSTPRN--AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
IIRGFS+S + AI LF +M+ ++P R T+PS+ KA A+ G ++G Q+HG +
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMF-------------DEVDTEFDVVAWNSMI 162
K G D+F+ + ++ MY CGF+ +AR++F D + ++V WN MI
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G + G+ +R LFDKM R+ VSWN+MISGY N FK+A+E+FREM++ +I+P+
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T+VS+L A ++LG++ GEW+H + + ++ ++ +A+IDMY KCG E+A+ VF +
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
P++ + W++M+ G A++G +AI F ++ + ++P +++I +LTAC+H G V + +
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 343 DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
YF+ M ++P I+HY CMVD LGR+GLL+EAE+ I +MP PD +IW +LL ACR
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRM 455
Query: 403 HGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS 462
GN+EM K+ A ++++ ++S YV +SN+YA+ + E E RL MKE I K+PGCS
Sbjct: 456 QGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 515
Query: 463 LIEVDGEVHEFVAGGRLHPKAPEVYLLL 490
LI++DG +HEFV HPKA E+ +L
Sbjct: 516 LIDIDGVLHEFVVEDDSHPKAKEINSML 543
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/479 (42%), Positives = 322/479 (67%), Gaps = 5/479 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT--SPAGDINYAYLVFTQIKKPNLFIWNTI 58
+ +L + HAH++K+GL AASR++A + S A I YA+ +F++I PN ++WNTI
Sbjct: 20 ISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTI 79
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IR ++ S TP A+ +F ML S + P + T+ K+ +G Q+HG V+K G
Sbjct: 80 IRAYANSPTPEAALTIFHQMLHAS-VLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTG 138
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID-ESRRL 177
L D FI NT+I++YA+CG + +AR + D + E DVV+WN+++ A+ G ++ SRR+
Sbjct: 139 LGDDLFIQNTLIHLYASCGCIEDARHLLDRM-LERDVVSWNALLSAYAERGLMELASRRV 197
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
F + +N VSWN+MI+GY +F E L LF +MQ +KP T+VS+L+ACA +GA+
Sbjct: 198 FGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGAL 257
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
QGEW+H ++ N ++ V TA++DMY KCG E+AL+VFN+ +K +S WNS++ GL
Sbjct: 258 SQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGL 317
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
+ +G A+++FS + KP+ ++F+ VL+AC+ +G +++ ++ F LM + I+P+
Sbjct: 318 STHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPT 377
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY CMVD LGR GLLEEAE+L++ MP +++W SLL ACR HGN+E+A++ A++++
Sbjct: 378 IEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLL 437
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
EL ES +V +SN+YA+ ++++ ME R M+ + K+PGCS+IEVDG V+EF+AG
Sbjct: 438 ELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFLAG 496
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/502 (41%), Positives = 323/502 (64%), Gaps = 2/502 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
+KDL +IHA I TG+ D ASRIL+F SP G I YA +F +I+KP++FI NT+I
Sbjct: 48 LKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLI 107
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R ++ S P +A++ + +M +S + P T+P L KA +++ R G +H V K G
Sbjct: 108 RAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGW 167
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ + N ++ MYA+CG + A L+FD E D +WN MI G KCG +RR+F+
Sbjct: 168 SSEVSVSNFLVQMYASCGLIESAGLVFDRT-PECDGASWNIMIGGYLKCGVFKSARRMFE 226
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M R+ VSW+ MI+GYV+ +FKE L LF++M + I+P+E +V+ L+ACA LGA+ Q
Sbjct: 227 AMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQ 286
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+WI ++ L + TA+IDMY KCG ERAL+VF+ + +K + W++M+ GLA+
Sbjct: 287 GQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAI 346
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG +A+ LFS ++ +KP+ ++FI +L AC+HS V++ +F MT Y +KP+
Sbjct: 347 NGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAH 406
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
H+ CMVD GRAG+L++A+ +I+SMP P++ IWG+LL+ACR HG+ E+ +Q K+++EL
Sbjct: 407 HHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLEL 466
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D N YVL+SN+YAA +++ E R +M+E ++ K PGCS I++ +HEFVAG
Sbjct: 467 DPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSS 526
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+ +Y L ++ ++ G
Sbjct: 527 HPQLEMIYAKLGEMSQELKAAG 548
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/508 (41%), Positives = 338/508 (66%), Gaps = 15/508 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+DLK++HA +IKT +DP+AA+ +L F S D++YA +F + +PN F +NT+I
Sbjct: 24 MQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLI 83
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R S+S+ P +A+L+FI+M+ ++P T+PS+FKA + R+G Q+HG VK GL
Sbjct: 84 RALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGL 143
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMF------DEVD--------TEFDVVAWNSMIIGL 165
+ D+F+ + ++ MY +CG + +A +F D D + DVV WN MI G
Sbjct: 144 DSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGY 203
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 225
+ GE++ +R LFD+M R+ VSWN MI+GY ++ FKEA+E+FREMQ + P+ T+V
Sbjct: 204 VRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLV 263
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
S+L A ++LGA+ G+W+H + V N ++ ++ +A+IDMY KCG E+ALQVF +PK+
Sbjct: 264 SVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKR 323
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
+ W++++ GLAM+G + + F ++ + + P +++I +L+AC+H+G VN+ + +F
Sbjct: 324 NVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFF 383
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
M ++P I+HY CMVD LGRAGLLEE+E+LI +MP PD +IW +LL AC+ HGN
Sbjct: 384 DHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGN 443
Query: 406 IEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 465
+EM K+ A+ ++EL ++S YV +SN+YA+ +E + RL+MKE+ + K+PGCS IE
Sbjct: 444 VEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIE 503
Query: 466 VDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+DG +HEF+ HPK+ +++ +L ++
Sbjct: 504 LDGVIHEFLVEDDSHPKSKKIHSMLQEM 531
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/518 (40%), Positives = 328/518 (63%), Gaps = 18/518 (3%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+DLK++HA IKTG +DP+ A+ ++ FC + DI+YA VF Q+ +PN F WNTI+R
Sbjct: 33 RDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRI 92
Query: 62 FSQSSTPR---NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
++++ A++LF ML ++P R T+PS+ KA A+ R+G Q+HG +VK G
Sbjct: 93 LAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFG 152
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD---------------VVAWNSMII 163
D+F+ + ++ MY C + +A +F + +FD VV WN MI
Sbjct: 153 FHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMID 212
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFT 223
G + G+I ++ LFD+M R+ VSWN MISGY +N F EA+ LF+EMQ NI P+ T
Sbjct: 213 GQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVT 272
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
+VS+L A A++GA+ G+WIH + N E++ ++ +A++DMY KCG ++ALQVF T+P
Sbjct: 273 LVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLP 332
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
K+ W++++ AM+G +AI F + + + P+ +++I +L+AC+H+G V + +
Sbjct: 333 KRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRS 392
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
+F+ M + ++P I+HY CMVD LGRAG LEEAE+LIR+MP +PD +IW +LL AC+ H
Sbjct: 393 FFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMH 452
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
N++M ++ A+ ++EL ++S YV +SNLYA+ +E RL MK + I K+PGCS
Sbjct: 453 KNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSW 512
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
IE+ G +HEF+ H KA E+ +L ++ + ++ G
Sbjct: 513 IEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNG 550
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/518 (40%), Positives = 327/518 (63%), Gaps = 18/518 (3%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+DLK++HA IKTG +DP+ A+ ++ FC + DI+YA VF Q+ +PN F WNTI+R
Sbjct: 33 RDLKQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRV 92
Query: 62 FSQSSTPR---NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
++++ A++LF ML ++P R T+PS+ KA A+ R+G Q+HG +VK G
Sbjct: 93 LAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFG 152
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD---------------VVAWNSMII 163
D+F+ + ++ MY C + +A +F + +FD VV WN MI
Sbjct: 153 FHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMID 212
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFT 223
G + G+I ++ LFD+M R+ VSWN MISGY +N F EA+ LF+EMQ NI P+ T
Sbjct: 213 GQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVT 272
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
+VS+L A A++GA+ G+WIH + N E++ ++ +A++DMY KCG + ALQVF T+P
Sbjct: 273 LVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLP 332
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
K+ W++++ AM+G +AI F + + + P+ +++I +L+AC+H+G V + +
Sbjct: 333 KRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRS 392
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
+F+ M + ++P I+HY CMVD LGRAG LEEAE+LIR+MP +PD +IW +LL AC+ H
Sbjct: 393 FFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMH 452
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
N++M ++ A+ ++EL ++S YV +SNLYA+ +E RL MK + I K+PGCS
Sbjct: 453 KNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSW 512
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
IE+ G +HEF+ H KA E+ +L ++ + ++ G
Sbjct: 513 IEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNG 550
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/509 (40%), Positives = 323/509 (63%), Gaps = 35/509 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT--SPAGDINYAYLVFTQIKKPNLFIWNTI 58
+ +L + HAH++K+GL AASR++A + S A I YA+ +F++I PN ++WNTI
Sbjct: 20 ISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNTI 79
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IR ++ S TP A+ +F ML S + P + T+ K+ +G Q+HG V+K G
Sbjct: 80 IRAYANSPTPEAALTIFHQMLHAS-VLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTG 138
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLM-------------------------------FD 147
L D FI NT+I++YA+CG + +AR + FD
Sbjct: 139 LGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFD 198
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
E+ TE +V +WN MI G G ++E+RR+F + +N VSWN+MI+GY +F E L
Sbjct: 199 EM-TERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLV 257
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
LF +MQ +KP T+VS+L+ACA +GA+ QGEW+H ++ N ++ V TA++DMY
Sbjct: 258 LFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYS 317
Query: 268 KCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIA 327
KCG E+AL+VFN+ +K +S WNS++ GL+ +G A+++FS + KP+ ++F+
Sbjct: 318 KCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVC 377
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
VL+AC+ +G +++ ++ F LM + I+P+I+HY CMVD LGR GLLEEAE+L++ MP
Sbjct: 378 VLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQK 437
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEER 447
+++W SLL ACR HGN+E+A++ A++++EL ES +V +SN+YA+ ++++ ME R
Sbjct: 438 EASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVR 497
Query: 448 LLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
M+ + K+PGCS+IEVDG V+EF+AG
Sbjct: 498 QKMRAQGVRKDPGCSMIEVDGTVYEFLAG 526
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/504 (40%), Positives = 321/504 (63%), Gaps = 5/504 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD---INYAYLVFTQIKKPNLFIWNT 57
+ LK IHA++I+T + D AASR++AFC P+ I+YA +F+QI+ PNLFI+N
Sbjct: 30 LTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNA 89
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IRG S S P A ++ + P LT+P L K+ +L G+Q HG ++K
Sbjct: 90 MIRGHSGSKNPDQAFHFYVQSQ-RQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKH 148
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G E D ++ N++++MYA G A L+F + DVV+W SMI G KCG+++ +R+L
Sbjct: 149 GFEKDVYVQNSLVHMYATFGDTEAATLIFQRM-YYVDVVSWTSMIRGFNKCGDVESARKL 207
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD+M +N V+W++MISGY +N F +A+ELF+ +Q Q ++ +E MVS++++CA LGA+
Sbjct: 208 FDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGAL 267
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
GE H+++V N LN I+ TA++DMY +CG ++A+ VF +P++ W +++ GL
Sbjct: 268 ELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGL 327
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AM+GY ++K F+ + + L P I+F AVL+AC+H G V + F M ++++P
Sbjct: 328 AMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPR 387
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
++HY CMVD LGRAG LEEAE+ + MP P+A +WG+LL ACR H N E+ ++ K +I
Sbjct: 388 LEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILI 447
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+L S YVL+SN+YA + ++E+ E R +MK ++K PG SLIE+DG VH+F G
Sbjct: 448 QLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIELDGRVHKFTIGD 507
Query: 478 RLHPKAPEVYLLLNDLGLLIQEMG 501
HP+ ++ + ++ + I+ G
Sbjct: 508 SSHPEMDKIERMWEEILMRIRAAG 531
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/495 (42%), Positives = 317/495 (64%), Gaps = 3/495 (0%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDI-NYAYLVFTQIKKPNLFIWNTIIR 60
+DLK IHAH+++T L D AASR++AFC ++ +YA V +QI+ PNLFI+N +IR
Sbjct: 31 RDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLFIYNALIR 90
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G S S P N+ +I L + P +T+P L KA AQL A G Q HG+ +K G E
Sbjct: 91 GCSTSENPENSFHYYIKALRFG-LLPDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFE 149
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ N++++MYA+ G ++ AR +F + FDVV+W MI G +CG+ +R LFD+
Sbjct: 150 QDFYVQNSLVHMYASVGDINAARSVFQRM-CRFDVVSWTCMIAGYHRCGDAKSARELFDR 208
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M RN V+W++MISGY RN F++A+E F +Q + + +E MV ++++CA LGA+ G
Sbjct: 209 MPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMG 268
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
E H +++ N LN I+ TA++DMY +CG E+A+ VF +P+K + CW +++ GLAM+
Sbjct: 269 EKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMH 328
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
GY +A+ FS + P I+F AVLTAC+H+G V + + F M + ++P ++H
Sbjct: 329 GYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEH 388
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGRAG L +AEK + MP P+A IW +LL ACR H N+E+ ++ K ++E+
Sbjct: 389 YGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQ 448
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
S YVL+SN+YA + ++++ R +MK+ + K PG SLIE+DG+VHEF G + H
Sbjct: 449 PEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSLIEIDGKVHEFTIGDKTH 508
Query: 481 PKAPEVYLLLNDLGL 495
P+ ++ + D+ L
Sbjct: 509 PEIEKIERIWEDIIL 523
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/537 (40%), Positives = 325/537 (60%), Gaps = 50/537 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTS-PAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+IH+H IK GL+ DP+ +R++AFC + +G++NYA+ VF I P++FIWNT+I
Sbjct: 20 MYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFIWNTMI 79
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+G+S+ S P N + +++ ML TS I+P R T+P K + + + G +L VK G
Sbjct: 80 KGYSKISHPENGVSMYLLML-TSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHGF 138
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG--------------- 164
+ + F+ I+M++ CG + A +FD D +VV WN M+ G
Sbjct: 139 DSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDA-CEVVTWNIMLSGYNRVKQFKISKMLLV 197
Query: 165 ----------------------------LAKCGEIDESRRLFDKMVSRNTVSWNSMISGY 196
A CGE+DE++ +FD M +R+ VSW +MI GY
Sbjct: 198 LSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGY 257
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
+R F AL LFREMQ N+KP EFTMVS+L ACA LGA+ GEW+ + N + ++
Sbjct: 258 LRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDS 317
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
V A++DMY KCG +A +VF + +K W +M+ GLA+NG+ EA+ +FS + +
Sbjct: 318 FVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEA 377
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE 376
++ PD I++I VL AC V++ K +FT MT + IKP++ HY CMVD LG G LEE
Sbjct: 378 SVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEE 433
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAA 436
A ++I +MP P++I+WGS L ACR H N+++A AAKQI+EL+ YVL+ N+YAA
Sbjct: 434 ALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEPENGAVYVLLCNIYAA 493
Query: 437 SYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
S ++E + R LM E I+K PGCSL+E++G V+EFVAG + HP++ E+Y L ++
Sbjct: 494 SKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENM 550
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/493 (44%), Positives = 315/493 (63%), Gaps = 7/493 (1%)
Query: 11 LIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPR 69
+++T L DP +AS+I+AFC +G + YA LVF QI P F N+IIRG++ + PR
Sbjct: 1 MLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPR 60
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
AIL F +++ + P R T+PSLFK+ G+ +G QLH K G D +I NT+
Sbjct: 61 QAIL-FYQLMMLQGLDPDRFTFPSLFKS---CGVLCEGKQLHCHSTKLGFASDAYIQNTL 116
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM-VSRNTVS 188
+ MY+NCG L AR +FD++ + VV+W +MI A+ E+ +LF +M ++ N
Sbjct: 117 MNMYSNCGCLVSARKVFDKMVNK-SVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFC 175
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
WN MI+G+V + ++EAL LF EMQ +K + TM SLL AC LGA+ G+W+H ++
Sbjct: 176 WNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIE 235
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
E++ + TA++DMY KCG E A++VF +P+K + W +++ GLAM G +A++
Sbjct: 236 KEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALE 295
Query: 309 LFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL 368
LF +Q S +KPD I+F+ VL AC+H+G VN+ YF M Y I+PSI+HY CMVD L
Sbjct: 296 LFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDML 355
Query: 369 GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYV 428
GRAG + EAE LI++MP PD + LLSACR HGN+ +A++AA+Q+IELD YV
Sbjct: 356 GRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYV 415
Query: 429 LMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYL 488
L+SN+Y++ +E A + R LM E I+K PGCS IEV G VHEFV G HP++ E+Y
Sbjct: 416 LLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYE 475
Query: 489 LLNDLGLLIQEMG 501
L+D+ ++ G
Sbjct: 476 TLDDMMRRLKSAG 488
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/487 (42%), Positives = 310/487 (63%), Gaps = 4/487 (0%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD--INYAYLVFTQIKKPNLFIWNTII 59
++LK+IHA ++KTGL +D A ++ L+FC S + YA +VF +P+ F+WN +I
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGFS S P ++LL+ ML +S T+PSL KA + L + Q+H ++ K G
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEETTQIHAQITKLGY 146
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D + N++I YA G A L+FD + E D V+WNS+I G K G++D + LF
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKLAHLLFDRI-PEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
KM +N +SW +MISGYV+ KEAL+LF EMQ +++P ++ + L+ACA+LGA+ Q
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+WIH++L +++++ +IDMY KCG E AL+VF + KK + W +++ G A
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G+ EAI F +Q +KP+ I+F AVLTAC+++G V + K F M Y +KP+I+
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY C+VD LGRAGLL+EA++ I+ MP P+A+IWG+LL ACR H NIE+ ++ + +I +
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D YV +N++A ++++A E R LMKE + K PGCS I ++G HEF+AG R
Sbjct: 446 DPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRS 505
Query: 480 HPKAPEV 486
HP+ ++
Sbjct: 506 HPEIEKI 512
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/509 (41%), Positives = 319/509 (62%), Gaps = 9/509 (1%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK+IHAH IKTG P+AA+ +L F T S +I YA F+QI PN F WNTIIR
Sbjct: 29 RHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNCFSWNTIIR 88
Query: 61 GFSQSS-------TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR 113
+ S A+L F ML ++P + T+P + KA A+L +G QLHG
Sbjct: 89 ALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIEEGKQLHGF 148
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
VVK GL D+F+ + ++ +Y CG + +A ++F + E +VV WN MI G + G++
Sbjct: 149 VVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGYVRMGDLRA 208
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
SR LFD M +++ VSWN MISG +N FKEA+E+F +MQ ++ P+ T+VS+L A ++
Sbjct: 209 SRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSR 268
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNS 292
LGAI G+W+H F N E++ ++ +A+IDMY KCG ++A+QVF + KK W++
Sbjct: 269 LGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIRNKKNPITWSA 328
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
++ GLAM+G +A+ F +Q + + P + +I VL+AC+H+G V + + + M
Sbjct: 329 IIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIV 388
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+ P I+HY CMVD LGRAG LEEAE+LI +MP PD +I +LL AC+ HGNIEM ++
Sbjct: 389 GLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKMHGNIEMGERI 448
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
AK ++ ++S YV +SN++A+ +E ++ RL MKE+ I K+PGCS IE+DG +HE
Sbjct: 449 AKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCSWIELDGVIHE 508
Query: 473 FVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
F+ HP+A ++ +L ++ ++ +G
Sbjct: 509 FLVEDDSHPRAEGIHSMLEEMSDRLRSVG 537
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/511 (38%), Positives = 323/511 (63%), Gaps = 18/511 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M++LK++HA L+KTG D A+ IL TS DI YA VF Q+ + N F WNT+I
Sbjct: 28 MRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQLPERNCFAWNTVI 87
Query: 60 RGFSQSSTPR-NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
R +++ +A+L+F ML + ++P + T+PS+ KA A + +G Q+HG ++K G
Sbjct: 88 RALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFG 147
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMF---------------DEVDTEFDVVAWNSMII 163
L D+F+ ++ MY CG + +A ++F DE EF+VV N M+
Sbjct: 148 LVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVD 207
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF-REMQEQNIKPSEF 222
G A+ G + +R LFD+M R+ VSWN MISGY +N +KEA+E+F R MQ ++ P+
Sbjct: 208 GYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRV 267
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T+VS+L A ++LG + G+W+H + N ++ ++ +A++DMY KCG E+A+QVF +
Sbjct: 268 TLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFERL 327
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
P+ + WN+++ GLAM+G N+ S ++ + P +++IA+L+AC+H+G V++ +
Sbjct: 328 PQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGR 387
Query: 343 DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
+F M + +KP I+HY CMVD LGRAG LEEAE+LI +MP PD +IW +LL A +
Sbjct: 388 SFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKM 447
Query: 403 HGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS 462
H NI++ +AA+ ++++ ++S YV +SN+YA+S ++ RL+MK++ I K+PGCS
Sbjct: 448 HKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCS 507
Query: 463 LIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
IE+DG +HEF+ H +A +++ +L ++
Sbjct: 508 WIEIDGVIHEFLVEDDSHSRAKDIHSMLEEI 538
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/501 (40%), Positives = 324/501 (64%), Gaps = 10/501 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K +I + +I TG D AASR+L F T SP ++Y+ +F +I+ N F+WNT++
Sbjct: 42 LKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMM 101
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R + QS++ A+LL+ ++V + + P TYP + +A A L G ++H V+K G
Sbjct: 102 RAYIQSNSAEKALLLY-KLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGF 160
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK---CGEIDESRR 176
+ D ++ NT+I MYA CG + +AR +FDE D V+WNS++ G K G++ E+ +
Sbjct: 161 DSDVYVQNTLINMYAVCGNMRDARKLFDESPV-LDSVSWNSILAGYVKKGDMGQVMEAWK 219
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
LF++M ++ VSW+++ISGY +N ++EAL +F EM ++ E +VS+L+ACA L
Sbjct: 220 LFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSI 279
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAII----DMYCKCGCPERALQVFNTVPKKGLSCWNS 292
++ G+ IH ++ E + A+I DMY KCGC E AL+VFN + +KG+S WN+
Sbjct: 280 VKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNA 339
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
++ GLA+NG ++ +FS ++++ + P+ I+F+ VL AC H G V++ + +F M E +
Sbjct: 340 LIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKH 399
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
I+P++KHY CMVD LGRAGLL EAEKLI SMP PD WG+LL AC+KHG+ EM ++
Sbjct: 400 GIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERV 459
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
+++IEL + +VL+SN++A+ +E+ +E R +MK+ + K PGCSLIE +G VHE
Sbjct: 460 GRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHE 519
Query: 473 FVAGGRLHPKAPEVYLLLNDL 493
F+AG + HP +V +LN++
Sbjct: 520 FLAGDKTHPWINKVEGMLNEM 540
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/509 (40%), Positives = 328/509 (64%), Gaps = 19/509 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSP---AGDINYAYLVFTQIKKPNLFIWNT 57
++DL +IHA IK+G +D +AA+ IL FC + D++YA+ +F Q+ + N F WNT
Sbjct: 29 IRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 88
Query: 58 IIRGFSQSSTPRN--AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
IIRGFS+S + AI LF +M+ I+P R T+PS+ KA A+ G + G Q+HG +
Sbjct: 89 IIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLAL 148
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMF-------------DEVDTEFDVVAWNSMI 162
K G D+F+ + ++ MY CG + +A ++F D + +VV WN MI
Sbjct: 149 KYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMI 208
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSE 221
G + G+ +R LFDKM R+ VSWN+MISGY +N FK+A+E+FREM++ ++I+P+
Sbjct: 209 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNY 268
Query: 222 FTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
T+VS+L A ++LG++ GEW+H + + ++ ++ +A+IDMY KCG E+A+ VF
Sbjct: 269 VTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFER 328
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+P++ + W++M+ G A++G +AI F ++ + ++P +++I +LTAC+H+G V +
Sbjct: 329 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEG 388
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
+ YF+ M ++P I+HY CMVD LGR GLL+EAE+ I +MP PD +IW +LL ACR
Sbjct: 389 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLGACR 448
Query: 402 KHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGC 461
H N+EM K+ A ++++ ++S YV +SN+YA+ + E E RL MKE+ I K+PGC
Sbjct: 449 MHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDIRKDPGC 508
Query: 462 SLIEVDGEVHEFVAGGRLHPKAPEVYLLL 490
S I++DG +HEF+ HP+A E+ +L
Sbjct: 509 SWIDIDGVLHEFLVEDDSHPRAKEINSML 537
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/487 (41%), Positives = 306/487 (62%), Gaps = 4/487 (0%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD--INYAYLVFTQIKKPNLFIWNTII 59
++LK+IHA ++KTGL +D A ++ L+ C S + YA +VF +P+ F+WN +I
Sbjct: 57 EELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 116
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGFS S P ++LL+ ML S T+PSL KA + L + Q+H ++ K G
Sbjct: 117 RGFSCSDEPERSLLLYQRMLCCSAPH-NAYTFPSLLKACSNLSALEETTQIHAQITKLGY 175
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D + N++I YA G A L+FD + D V+WNS+I G AK G++D + LF
Sbjct: 176 ENDVYAVNSLINSYAATGNFKLAHLLFDRIPKP-DAVSWNSVIKGYAKAGKMDIALTLFR 234
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
KMV +N +SW +MISGYV+ KEAL+LF EMQ +++P ++ + L+ACA+LGA+ Q
Sbjct: 235 KMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 294
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+WIH++L +++++ +IDMY KCG AL+VF + +K + W +++ G A
Sbjct: 295 GKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAY 354
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G+ EAI F +Q +KP+ I+F VLTAC+++G V + K F M Y +KP+I+
Sbjct: 355 HGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIE 414
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY C+VD L RAGLL+EA++ I+ MP P+A+IWG+LL ACR H NIE+ ++ + +I +
Sbjct: 415 HYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 474
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D YV +N++A ++++A E R LMKE + K PGCS I ++G HEF+AG R
Sbjct: 475 DPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRS 534
Query: 480 HPKAPEV 486
HP+ ++
Sbjct: 535 HPEIEKI 541
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/497 (40%), Positives = 319/497 (64%), Gaps = 3/497 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H H++K G + + + L S +G+++ A VF + K ++ WN +I G+++
Sbjct: 139 RELHDHIVKLGFSSN-VFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNR 197
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S ++ LF D + + P +T S+ A ++L G ++H V +E +
Sbjct: 198 SKQFDESMKLF-DEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRV 256
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N +I MYA CG + A +FD + + DV++W +++ G G++ +R FDKM R
Sbjct: 257 LENALIDMYAACGDMDTALGIFDNMKSR-DVISWTAIVTGFTNLGQVGLARNYFDKMPER 315
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSW +MI GY++ +FKE L LFREMQ NIKP EFTMVS+L ACA LGA+ GEWI
Sbjct: 316 DFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIK 375
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N ++++ V A+IDMY CG E+A+++FN +P + W +++FGLA+NGY
Sbjct: 376 AYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGE 435
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+ +FS + +++ PD ++ I VL AC HSG V++ K +F MT + I+P++ HY CM
Sbjct: 436 EALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCM 495
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L+EA ++I++MP P++I+WGSLL ACR H + EMA+ AA+QI+EL+
Sbjct: 496 VDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENG 555
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+ N+YAA ++E+ E R LM + I+K PGCSLIE++G VHEFVAG ++HP++
Sbjct: 556 AVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSK 615
Query: 485 EVYLLLNDLGLLIQEMG 501
E+Y L+++ + ++ G
Sbjct: 616 EIYSKLDEMSVDLKFAG 632
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 221/450 (49%), Gaps = 67/450 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTII 59
M LK+IH+ I TGL +PI ++I+AFC GD+ YA +VF + PN F+WN +I
Sbjct: 32 MAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMI 91
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+G+S+ P +A+ ++ +ML + P TYP L K + + + G +LH +VK G
Sbjct: 92 KGYSRVGCPNSAVSMYCEML-ERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGF 150
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ F+ N +I++Y+ G +S AR +FD ++ DVV WN MI G + + DES +LFD
Sbjct: 151 SSNVFVQNALIHLYSLSGEVSVARGVFDR-SSKGDVVTWNVMISGYNRSKQFDESMKLFD 209
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
EM+ + PS T+VS+L+AC+KL +
Sbjct: 210 -------------------------------EMERMRVLPSSITLVSVLSACSKLKDLNV 238
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV----- 294
G+ +H ++ E ++ A+IDMY CG + AL +F+ + + + W ++V
Sbjct: 239 GKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTN 298
Query: 295 ---FGLAMNGYE-----------------------NEAIKLFSGLQSSNLKPDYISFIAV 328
GLA N ++ E + LF +Q++N+KPD + +++
Sbjct: 299 LGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSI 358
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
LTAC H G + + ++ + +IK + ++D G +E+A ++ +MP
Sbjct: 359 LTACAHLGAL-ELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHR- 416
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
D I W +++ +G E A Q+++
Sbjct: 417 DKISWTAVIFGLAINGYGEEALDMFSQMLK 446
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 123/252 (48%), Gaps = 2/252 (0%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G+++ +R +FD M N WN+MI GY R A+ ++ EM E+ + P E+T LL
Sbjct: 67 GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+ A++ G +H+ +V F N V A+I +Y G A VF+ K +
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVV 186
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN M+ G + +E++KLF ++ + P I+ ++VL+AC+ +N K +
Sbjct: 187 TWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYV 246
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
+ KI+P + ++D G ++ A + +M S D I W ++++ G + +
Sbjct: 247 KD-LKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSR-DVISWTAIVTGFTNLGQVGL 304
Query: 409 AKQAAKQIIELD 420
A+ ++ E D
Sbjct: 305 ARNYFDKMPERD 316
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/491 (41%), Positives = 313/491 (63%), Gaps = 3/491 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +K+I +HL +G DP AA RI++FC S GDI++AYL+F + + FIWNT++
Sbjct: 26 MAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTML 85
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R F+ P + L+ ML T + P T+ L +A AQL G LH + V+ G
Sbjct: 86 RAFTDKKEPATVLSLYKYMLSTGFL-PNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGW 144
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E F+ N ++++YA+C + AR +FD DVV W ++I G AK G++ +R+LFD
Sbjct: 145 EAYDFVQNGLLHLYASCNCMDSARRLFDG-SVNRDVVTWTAVINGYAKSGQVVVARQLFD 203
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M +N VSW++MI+GY + F+EALELF +MQ +P+ +V L ACA LGA+ Q
Sbjct: 204 EMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQ 263
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G WIH ++ N L+ I+ TA+IDMY KCGC E A +VF+ + + + + S++ GLA
Sbjct: 264 GRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLAN 323
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G+ AI++F+ +Q+ + P+ ++FI +L+AC+ G V + F MT Y I+P ++
Sbjct: 324 HGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQ 383
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY C+VD LGRAG+LE+A++++R MP +PD+ + G+LL+ACR HG++E+ K+ + + E
Sbjct: 384 HYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAER 443
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ +VL+SN+YA++ Q+E+ + R M+E K++K PGCSLIEVDG V EFVAG
Sbjct: 444 SLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMS 503
Query: 480 HPKAPEVYLLL 490
H E+ LLL
Sbjct: 504 HVFMDEIVLLL 514
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/491 (41%), Positives = 313/491 (63%), Gaps = 3/491 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +K+I +HL +G DP AA RI++FC S GDI++AYL+F + + FIWNT++
Sbjct: 1 MAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTML 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R F+ P + L+ ML T + P T+ L +A AQL G LH + V+ G
Sbjct: 61 RAFTDKKEPATVLSLYKYMLSTGFL-PNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGW 119
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E F+ N ++++YA+C + AR +FD DVV W ++I G AK G++ +R+LFD
Sbjct: 120 EAYDFVQNGLLHLYASCNCMDSARRLFDG-SVNRDVVTWTAVINGYAKSGQVVVARQLFD 178
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M +N VSW++MI+GY + F+EALELF +MQ +P+ +V L ACA LGA+ Q
Sbjct: 179 EMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQ 238
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G WIH ++ N L+ I+ TA+IDMY KCGC E A +VF+ + + + + S++ GLA
Sbjct: 239 GRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLAN 298
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G+ AI++F+ +Q+ + P+ ++FI +L+AC+ G V + F MT Y I+P ++
Sbjct: 299 HGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQ 358
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY C+VD LGRAG+LE+A++++R MP +PD+ + G+LL+ACR HG++E+ K+ + + E
Sbjct: 359 HYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAER 418
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ +VL+SN+YA++ Q+E+ + R M+E K++K PGCSLIEVDG V EFVAG
Sbjct: 419 SLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSLIEVDGAVFEFVAGDMS 478
Query: 480 HPKAPEVYLLL 490
H E+ LLL
Sbjct: 479 HVFMDEIVLLL 489
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/495 (40%), Positives = 315/495 (63%), Gaps = 3/495 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K L + H ++ GL +D I SR + C+S G +Y++ +FT +P+++++NTII+
Sbjct: 54 LKHLHQTHCFMLSRGLDQDNILLSRFIEACSS-LGFSHYSHSIFTHKTRPDIYLYNTIIK 112
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S AILL+ + ++ S ++ + P + KA +L G Q+H + + GL
Sbjct: 113 ALSNPELATEAILLY-NRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLV 171
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + +I MY++CG +SEAR +FD V DV WN+M+ G AK G++D +R LF++
Sbjct: 172 SDIHVVTALIQMYSSCGCVSEARQLFDGVCFR-DVAFWNAMVAGYAKVGDVDNARHLFER 230
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M RN +SW ++I+GY + + EA+ +FR MQ + ++P E M++ L+ACA LGA+ G
Sbjct: 231 MPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELG 290
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
EWIHN++ + + A+IDMY KCG E+AL+VF + K + W SM+ GLA++
Sbjct: 291 EWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALH 350
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA+++FS ++ + +KP+ I+F+A+L+AC H G V + YF M Y IKP I+H
Sbjct: 351 GLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQH 410
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CM+D LGRAG L+EA++L+R MP + +A IWGSLL+A R HG+ E+ KQA + +I+++
Sbjct: 411 YGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVE 470
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ S Y L+SN+YA ++ EA R +M++ ++K PG S IEV+ VHEFVAG +LH
Sbjct: 471 PHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFVAGDKLH 530
Query: 481 PKAPEVYLLLNDLGL 495
P++ ++ +L J L
Sbjct: 531 PQSERIFEVLCKJNL 545
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/495 (40%), Positives = 315/495 (63%), Gaps = 3/495 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K L + H ++ GL +D I SR + C+S G +Y++ +FT +P+++++NTII+
Sbjct: 54 LKHLHQTHCFMLSRGLDQDNILLSRFIEACSS-LGFSHYSHSIFTHKTRPDIYLYNTIIK 112
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S AILL+ + ++ S ++ + P + KA +L G Q+H + + GL
Sbjct: 113 ALSNPELATEAILLY-NRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAIGTGLV 171
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + +I MY++CG +SEAR +FD V DV WN+M+ G AK G++D +R LF++
Sbjct: 172 SDIHVVTALIQMYSSCGCVSEARQLFDGVCFR-DVAFWNAMVAGYAKVGDVDNARHLFER 230
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M RN +SW ++I+GY + + EA+ +FR MQ + ++P E M++ L+ACA LGA+ G
Sbjct: 231 MPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELG 290
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
EWIHN++ + + A+IDMY KCG E+AL+VF + K + W SM+ GLA++
Sbjct: 291 EWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALH 350
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA+++FS ++ + +KP+ I+F+A+L+AC H G V + YF M Y IKP I+H
Sbjct: 351 GLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQH 410
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CM+D LGRAG L+EA++L+R MP + +A IWGSLL+A R HG+ E+ KQA + +I+++
Sbjct: 411 YGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHLIKVE 470
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ S Y L+SN+YA ++ EA R +M++ ++K PG S IEV+ VHEFVAG +LH
Sbjct: 471 PHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGSCIEVNNRVHEFVAGDKLH 530
Query: 481 PKAPEVYLLLNDLGL 495
P++ ++ +L + L
Sbjct: 531 PQSERIFEVLCKINL 545
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/538 (38%), Positives = 327/538 (60%), Gaps = 41/538 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDP-IAASRILAFC---TSPAGDINYAYLVFTQIKKPNLFIWN 56
+ LK+ HA +++TG +D IA S + ++ T+ + VF ++KPN+F+WN
Sbjct: 47 LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 106
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+I+ +++ P AILL+ +M+V + +P + TYP++ KA + G+ +G Q+H +VK
Sbjct: 107 CMIKVCIENNEPFKAILLYYEMMV-AHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVK 165
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV-------------------- 156
GL D I ++ I MYA+ G L EAR + D+ E D V
Sbjct: 166 HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARE 225
Query: 157 ------------AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
WN+MI G ++CG ++ +R FD+M R+ +SW++MI GY++ F E
Sbjct: 226 LFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFME 285
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
ALE+F +MQ++ I+P +F + S+L+ACA LGA+ QG WIH + N +L+ ++ T+++D
Sbjct: 286 ALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVD 345
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
MY KCG + A +VF + K +S WN+M+ GLAM+G +AI LFS + ++ P+ I+
Sbjct: 346 MYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEIT 402
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
F+ VL AC H G V + F M + Y ++P I+HY C+VD LGRAGLL EAEK++ S+
Sbjct: 403 FVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSI 462
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
P++P +WG+LL ACRKHGN+E+ ++ K ++EL+ S Y L+SN+YA + ++EE
Sbjct: 463 PTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVG 522
Query: 445 EERLLMKEVKIEKEPGCSLIEVD-GEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
E R LMKE I+ PG S+I++ GEVH+F+ G HP+ ++Y +L+ + +Q G
Sbjct: 523 EVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEG 580
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/486 (40%), Positives = 304/486 (62%), Gaps = 3/486 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK IHAHLI+ D AAS +++ + ++YA VF QI+ PNLFI+N+ IR
Sbjct: 28 LSHLKIIHAHLIRAHTIFDVFAASCLISISINK-NLLDYAAQVFYQIQNPNLFIYNSFIR 86
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GFS S P + ++ + + P LTYP L KA Q G G Q HG++++ G +
Sbjct: 87 GFSGSKDPDKSFHFYVQS-KRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFD 145
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ N+++ MY+ G + A +F + DVV+W SM+ G K G++ +R+LFDK
Sbjct: 146 SDVYVQNSLVTMYSTLGDIKSASYVFRRISC-LDVVSWTSMVAGYIKSGDVTSARKLFDK 204
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +N V+W+ MISGY +N F +A+EL+ +Q + + +E MVS++ +CA LGA+ G
Sbjct: 205 MPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELG 264
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
E H++++ N +N I+ TA++DMY +CG ++A+ VF+ +P + W +++ G AM+
Sbjct: 265 ERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMH 324
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
GY +A++ FS ++ + L P I+F AVL+AC+H G V + + F M Y+I+P ++H
Sbjct: 325 GYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEH 384
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGRAG L EAEK + MP P+A IWG+LL ACR H N E+A++A K +IEL
Sbjct: 385 YGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELK 444
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
S YVL+SN+YA + ++E R +MKE + K PG +L E+DG+VH+F G + H
Sbjct: 445 PEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTH 504
Query: 481 PKAPEV 486
P+ ++
Sbjct: 505 PEIQQI 510
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/493 (41%), Positives = 311/493 (63%), Gaps = 10/493 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT--SPAGDINYAYLVFTQIKKPNLFIWNTI 58
M L++ H+ +I+ GL+ ++ FC S + + YA +F I +P+ F++NTI
Sbjct: 35 MSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLYNTI 94
Query: 59 IRGFSQSST-PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
I+GF S P N+ILL ++ + + P T+PSL A ++ + G Q+H + K
Sbjct: 95 IKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKI---QHGMQIHAHLFKF 151
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G N++I+MY L EAR +F + D V+W S+I G +K G IDE+ +
Sbjct: 152 GFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHP-DSVSWTSLISGYSKWGLIDEAFTI 210
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGA 236
F M +N+ SWN+M++ YV+ +F EA LF M+ E N +F ++L+AC LGA
Sbjct: 211 FQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGA 270
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK--KGLSCWNSMV 294
+ QG+WIH ++ N EL++ + TAI+DMYCKCGC E+ALQVF+++P + +S WN M+
Sbjct: 271 LDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMI 330
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLAM+G AI+LF ++ + PD I+F+ +LTAC HSG V + ++YF+ M Y I
Sbjct: 331 GGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGI 390
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+P ++H+ CMVD LGRAG++ EA KLI MP PD + G+LL AC+KH NIE+ ++ +
Sbjct: 391 EPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGR 450
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
++IEL+ N S YVL++NLYA + ++E+A + R LM + ++K PG S+IE+ G VHEF+
Sbjct: 451 RVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFSMIELQGTVHEFI 510
Query: 475 AGGRLHPKAPEVY 487
AG R HP+A E++
Sbjct: 511 AGERNHPQAKELH 523
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/538 (38%), Positives = 326/538 (60%), Gaps = 41/538 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDP-IAASRILAFC---TSPAGDINYAYLVFTQIKKPNLFIWN 56
+ LK+ HA +++TG +D IA S + ++ T+ + VF ++KPN+F+WN
Sbjct: 48 LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 107
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+I+ +++ P AILL+ +M+V +P + TYP++ KA + G+ +G Q+H +VK
Sbjct: 108 CMIKVCIENNEPFKAILLYYEMVVAHS-RPNKYTYPAVLKACSDSGVVAEGVQVHAHLVK 166
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV-------------------- 156
GL D I ++ I MYA+ G L EAR + D+ E D V
Sbjct: 167 HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARE 226
Query: 157 ------------AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
WN+MI G ++CG ++ +R FD+M R+ +SW++MI GY++ F E
Sbjct: 227 LFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFME 286
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
ALE+F +MQ++ I+P +F + S+L+ACA LGA+ QG WIH + N +L+ ++ T+++D
Sbjct: 287 ALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVD 346
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
MY KCG + A +VF + K +S WN+M+ GLAM+G +AI LFS + ++ P+ I+
Sbjct: 347 MYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEIT 403
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
F+ VL AC H G V + F M + Y ++P I+HY C+VD LGRAGLL EAEK++ S+
Sbjct: 404 FVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSI 463
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
P++P +WG+LL ACRKHGN+E+ ++ K ++EL+ S Y L+SN+YA + ++EE
Sbjct: 464 PTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVG 523
Query: 445 EERLLMKEVKIEKEPGCSLIEVD-GEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
E R LMKE I+ PG S+I++ GEVH+F+ G HP+ ++Y +L+ + +Q G
Sbjct: 524 EVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEG 581
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/489 (40%), Positives = 304/489 (62%), Gaps = 31/489 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
+ LK+I + ++ TGL +D A+SR++AFC S D++Y + + PN F WN I
Sbjct: 63 ISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAI 122
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGF S PR A++L+ +L +P TYP LFKA A+L L R G+++ G V+ G
Sbjct: 123 RGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGF 182
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI----------------- 162
+ D F+ N +I++ +CG L AR MFD+ D+V+WNSMI
Sbjct: 183 DSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVR-DLVSWNSMINGYCGNLESARKLFDSM 241
Query: 163 ------------IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
+G A+ G +D + +LFD+M ++ V WN+MI GYV + KEAL LF
Sbjct: 242 TNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFN 301
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
EMQ NI P E TMVS L+AC++LGA+ G WIH+++ + LN + TA+IDMY KCG
Sbjct: 302 EMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCG 361
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
+A+QVF +P + W +++ GLA++G + AI FS + +++ PD ++F+ +L+
Sbjct: 362 KITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLS 421
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC H G V + + YF+ M+ + + P +KHYSCMVD LGRAGLLEEAE+LI+SMP + DA
Sbjct: 422 ACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADA 481
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
++WG+L ACR HGN+ M ++AA +++++D ++S YVL++N+Y + ++EA + R LM
Sbjct: 482 VVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLM 541
Query: 451 KEVKIEKEP 459
++ +EK P
Sbjct: 542 RQRGVEKTP 550
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/530 (37%), Positives = 318/530 (60%), Gaps = 38/530 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDP--IAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNT 57
+K LK+IHA +IKT + D ++R+ A C S D YA + Q++ PNL ++N
Sbjct: 50 IKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNA 109
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
IIRG + S+ L+ +++ I P T P + KA A+ R+G ++HG+ +K
Sbjct: 110 IIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKM 169
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK---------- 167
GL D ++ NT++ MYA C + AR +FD + D+V+W +MI G K
Sbjct: 170 GLASDVYVSNTLMRMYAVCDVIRSARKVFD-TSPQRDLVSWTTMIQGYVKMGFAREGVGL 228
Query: 168 ------------------------CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
CG+ + +R++F +M +N VSWNSMISG + +FK
Sbjct: 229 YIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFK 288
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
E+L +FR+MQ +KP + T+V++LN+CA LG + G+W+H +L N + + A++
Sbjct: 289 ESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALV 348
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY KCG ++A VF + +K + + +M+ GLAM+G +A+ LFS + ++PD +
Sbjct: 349 DMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEV 408
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F+ VLTAC+H G V + + YF M+ Y ++P ++HY CMVD LGRAGL+ EAE+ IR+
Sbjct: 409 TFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRN 468
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
MP +PDA + G+LL AC+ HG +E+ + K+I +++ + YVLMSN+Y+++ ++ +A
Sbjct: 469 MPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDA 528
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
++ R MKE +EK PGCS IE+DG +HEF G + HPK E+Y LL+++
Sbjct: 529 LKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEI 578
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/485 (39%), Positives = 311/485 (64%), Gaps = 2/485 (0%)
Query: 9 AHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTP 68
A LI + + I AS + G + A+ +F ++ + ++ W+ +I G+ Q+
Sbjct: 226 AKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMY 285
Query: 69 RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNT 128
A+++FI+M + ++ + S+ A A L + + G +HG V++ G+E + N
Sbjct: 286 EEALVMFIEM-NANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNA 344
Query: 129 IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS 188
+I+MY+ G + +A+ +F+ D ++WNSMI G KCG ++++R LFD M ++ VS
Sbjct: 345 LIHMYSGSGEIMDAQKLFNG-SHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVS 403
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
W+++ISGY ++ F E L LF EMQ I+P E +VS+++AC L A+ QG+W+H ++
Sbjct: 404 WSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIR 463
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
N ++N I+ T ++DMY KCGC E AL+VFN + +KG+S WN+++ GLA+NG ++
Sbjct: 464 KNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLD 523
Query: 309 LFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL 368
+FS ++++ + P+ I+F+ VL AC H G V++ + +F M E + I+P++KHY CMVD L
Sbjct: 524 MFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLL 583
Query: 369 GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYV 428
GRAGLL EAEKLI SMP PD WG+LL AC+KHG+ EM ++ +++IEL + +V
Sbjct: 584 GRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHV 643
Query: 429 LMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYL 488
L+SN++A+ +E+ +E R +MK+ + K PGCSLIE +G VHEF+AG + HP +V
Sbjct: 644 LLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEG 703
Query: 489 LLNDL 493
+LN++
Sbjct: 704 MLNEM 708
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 235/470 (50%), Gaps = 67/470 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K +I + +I TG D AASR+L F T SP ++Y+ +F +I+ N F+WNT++
Sbjct: 54 LKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMM 113
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R + QS++ A+LL+ ++V + + P TYP + +A A L G ++H V+K G
Sbjct: 114 RAYIQSNSAEKALLLY-KLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGF 172
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D ++ NT+I MYA CG + +AR +FDE D V+WNS++ G K G+++E++ +FD
Sbjct: 173 DSDVYVQNTLINMYAVCGNMRDARKLFDESPV-LDSVSWNSILAGYVKKGDVEEAKLIFD 231
Query: 180 KMVSRNT-------------------------------VSWNSMISGYVRNVKFKEALEL 208
+M RN VSW+++ISGY +N ++EAL +
Sbjct: 232 QMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVM 291
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC- 267
F EM ++ E +VS+L+ACA L ++ G+ IH ++ E + A+I MY
Sbjct: 292 FIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSG 351
Query: 268 ------------------------------KCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
KCG E+A +F+ +P+K + W++++ G
Sbjct: 352 SGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGY 411
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A + +E + LF +Q ++PD ++V++AC H ++Q K + +K +
Sbjct: 412 AQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGK-WVHAYIRKNGLKVN 470
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ + ++D + G +E A ++ M + W +L+ +G +E
Sbjct: 471 VILGTTLLDMYMKCGCVENALEVFNGM-EEKGVSSWNALIIGLAVNGLVE 519
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/530 (37%), Positives = 319/530 (60%), Gaps = 36/530 (6%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTIIRGF 62
L ++H ++++G +D + +L +P + ++A VF+ I PN+FIWN +I+G
Sbjct: 49 LTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGC 108
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+++ AI + M++ + +P + TYP+LFKA + ++G Q+HG VVK G+ D
Sbjct: 109 LENNKLFKAIYFYGRMVIDA--RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSD 166
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID---------- 172
I + I+MYA+ G L +AR MF E DVV WN+MI G KCG ++
Sbjct: 167 VHIKSAGIHMYASFGRLEDARKMF--YSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMP 224
Query: 173 ---------------------ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
++R+LFD+M R+ +SW+SM+ GY+ ++KEALE+F++
Sbjct: 225 VKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQ 284
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ + +P F + S+L AC+ +GAI QG W+H +L N +L+ ++ TA++DMY KCG
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGR 344
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ +VF + ++ + WN+M+ GLA++G +A++LFS LQ +KP+ I+ + VLTA
Sbjct: 345 LDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTA 404
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H+G V++ F M E Y + P ++HY CMVD LGR+GL EAE LI SMP P+A
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAA 464
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+WG+LL ACR HGN ++A++ K ++EL+ S YVL+SN+YA +F++ + R LMK
Sbjct: 465 VWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMK 524
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ I+ PG S+++++G VHEF G HP+ E+Y L + +Q G
Sbjct: 525 DRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAG 574
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/500 (41%), Positives = 318/500 (63%), Gaps = 10/500 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K LK +HA L++ GL +D +++L F + G+ NY++ +F Q K+PN+F++NT+I
Sbjct: 23 LKHLKHVHAALLRLGLDEDSYLLNKVLRF-SFNFGNTNYSHRIFHQTKEPNIFLFNTMIH 81
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G + + + +I ++ M + P T+P L KA A+L ++ G +LHG VVK G E
Sbjct: 82 GLVLNDSFQESIEIYHSMR-KEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCE 140
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI---IGLAKCGE-IDESRR 176
D F++ +++ +Y CGF+ A +FD++ E +V AW ++I IG+ KC E ID RR
Sbjct: 141 SDAFVNTSLVSLYGKCGFIDNAFKVFDDI-PEKNVAAWTAIISGYIGVGKCREAIDMFRR 199
Query: 177 ---LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+FD M+ ++ VSW+SMI GY N KEAL+LF +M + +P + MV +L ACA+
Sbjct: 200 ACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACAR 259
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LGA+ G W N + N F N ++ TA+IDMY KCG + A +VF + KK + WN+
Sbjct: 260 LGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAA 319
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ GLAM+G+ A LF ++ S ++PD +F+ +L AC H+G V++ + YF M +
Sbjct: 320 ISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFT 379
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
+ P I+HY CMVD LGRAG L+EA +L++SMP + +AI+WG+LL CR H + ++ +
Sbjct: 380 LTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVL 439
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
KQ+I L+ + S YVL+SN+Y+AS+++E+A + R +M E I+K PG S IEVDG VHEF
Sbjct: 440 KQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEF 499
Query: 474 VAGGRLHPKAPEVYLLLNDL 493
+ G HP + ++Y L +L
Sbjct: 500 LVGDTSHPLSEKIYAKLGEL 519
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/525 (38%), Positives = 313/525 (59%), Gaps = 34/525 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTII 59
+ LK++HA ++TG +D + ++ +P ++N+A VF + PN+F++N II
Sbjct: 43 LHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIII 102
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+G Q++ P AI + M++ +P + TYP+LFKA A +G Q+H V+KQGL
Sbjct: 103 KGCLQNNEPCKAICCYYKMMIAHA-RPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGL 161
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV----------------------- 156
D I + I MY + G + AR M E D DV+
Sbjct: 162 SGDVHIRSAGIQMYGSFGEVEGARRMLGE-DGNSDVICFNAMIDGYLKCGEVEAAKELFW 220
Query: 157 --------AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
+WN M+ G+AKCG I+E+R LF++M +N +SW++MI GY++ +KEALE+
Sbjct: 221 SMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEV 280
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
F MQ + I+P +F + S+L ACA LGA+ QG WIH ++ N + ++ TA++DMY K
Sbjct: 281 FNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAK 340
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG + A VF + KK + WN+M+ GL M+G +AI+LF +Q +P+ I+ + V
Sbjct: 341 CGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGV 400
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC HSG V++ F M E Y I+P ++HY C+VD LGRAGLL EAE+++ SMP +P
Sbjct: 401 LSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEP 460
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
A +WG+LL ACRKHG++E+ ++ K ++EL+ S Y L+SN+YA + ++++ R
Sbjct: 461 SAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRK 520
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
LMKE ++ G S+I+ DG VHEF G HP+ +YL+L ++
Sbjct: 521 LMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNM 565
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/530 (38%), Positives = 318/530 (60%), Gaps = 36/530 (6%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTIIRGF 62
L ++HA ++++G +D + +L +P + ++A VF+ I PN+FIWN +I+G
Sbjct: 49 LTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGC 108
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+++ AI + M++ + +P + TYP+LFKA + ++G Q+HG VVK G+ D
Sbjct: 109 LENNKLFKAIYFYGRMVIDA--RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSD 166
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID---------- 172
I + I MYA+ G L +AR MF E DVV WN+MI G KCG ++
Sbjct: 167 VHIKSAGIQMYASFGRLEDARKMF--YSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMP 224
Query: 173 ---------------------ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
++R+LFD+M R+ +SW+SM+ GY+ ++KEALE+F++
Sbjct: 225 VKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQ 284
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ + +P F + S+L AC+ +GAI QG W+H +L N +L+ ++ TA++DMY KCG
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGR 344
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ +VF + ++ + WN+M+ GLA++G +A++LFS LQ +KP+ I+ + VLTA
Sbjct: 345 LDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTA 404
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H+G V++ F M E Y + P ++HY CMVD LGR+GL EAE LI SMP P+A
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAA 464
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+WG+LL ACR HGN ++A++ K ++EL+ S YVL+SN+YA +F++ + R LMK
Sbjct: 465 VWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMK 524
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
I+ PG S+++++G VHEF G HP+ E+Y L + +Q G
Sbjct: 525 NRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAG 574
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/498 (40%), Positives = 315/498 (63%), Gaps = 4/498 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH ++K D ++ ++ F +S GD++ AYLVF++I + ++ WN++I GF Q
Sbjct: 151 QAIHGMVMKASFGSDLFISNSLIHFYSS-LGDLDSAYLVFSKIVEKDIVSWNSMISGFVQ 209
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+P A+ LF M + + +P R+T + A A+ G + + G++ +
Sbjct: 210 GGSPEEALQLFKRMKMENA-RPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLI 268
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MY CG L +AR +FD+++ E D+V+W +MI G AK G+ D +RR+FD M
Sbjct: 269 LSNAMLDMYVKCGSLEDARRLFDKME-EKDIVSWTTMIDGYAKVGDYDAARRVFDVMPRE 327
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+ +WN++IS Y +N K KEAL +FRE+Q +N KP+E T+ S L ACA+LGA+ G WI
Sbjct: 328 DITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWI 387
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++ +LN + T++IDMY KCG E+AL+VF +V ++ + W++M+ GLAM+G+
Sbjct: 388 HVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHG 447
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
AI LFS +Q + +KP+ ++F +L AC+HSG V++ + +F M Y + P KHY+C
Sbjct: 448 RAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYAC 507
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG LEEA +LI MP P A +WG+LL ACR +GN+E+A+ A +++E D N
Sbjct: 508 MVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNN 567
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
YVL+SN+YA + +++ R MK +EKEPGCS IEV+G +HEF+ G HP +
Sbjct: 568 HGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLS 627
Query: 484 PEVYLLLNDLGLLIQEMG 501
E+Y L+++ I+ G
Sbjct: 628 TEIYSKLDEIVARIKSTG 645
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 218/437 (49%), Gaps = 67/437 (15%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K LK++HAH+++TGL DP +A+++ C S ++YA VF QI +PNL+ WNT+IR
Sbjct: 44 KHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIR 103
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
F+ S P +L+FI ML S P T+P + KA ++ G +HG V+K
Sbjct: 104 AFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFG 163
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D FI N++I+ Y++ G L A L+F ++ E D+V+WNSMI G + G +E
Sbjct: 164 SDLFISNSLIHFYSSLGDLDSAYLVFSKI-VEKDIVSWNSMISGFVQGGSPEE------- 215
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
AL+LF+ M+ +N +P+ TMV +L+ACAK + G
Sbjct: 216 ------------------------ALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFG 251
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER-------------------------- 274
W +++ N ++N I+ A++DMY KCG E
Sbjct: 252 RWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKV 311
Query: 275 -----ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYISFIAV 328
A +VF+ +P++ ++ WN+++ NG EA+ +F LQ + N KP+ ++ +
Sbjct: 312 GDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLAST 371
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC G ++ + + + IK + + ++D + G LE+A ++ S+
Sbjct: 372 LAACAQLGAMDLG-GWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERR- 429
Query: 389 DAIIWGSLLSACRKHGN 405
D +W ++++ HG+
Sbjct: 430 DVFVWSAMIAGLAMHGH 446
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/492 (41%), Positives = 303/492 (61%), Gaps = 10/492 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +HAH+++ G+ ++ AS ++A T+ LV + P WN +I G ++
Sbjct: 43 RAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARALV-GECDTP--VAWNALISGHNR 99
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD---GAQLHGRVVKQGLEF 121
+ F+DM + P +TY S+ A + RD G Q+HGRVV G+
Sbjct: 100 GGRFGESCGSFVDM-ARAGAAPTPVTYVSVLSACGKG--TRDVLLGMQVHGRVVGSGVLP 156
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D + N ++ MYA C + A +FD + VV+W S++ GLA+ G++DE+R LFD+M
Sbjct: 157 DLRVENALVDMYAECADMGSAWKVFDGMQVR-SVVSWTSLLSGLARLGQVDEARDLFDRM 215
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+TVSW +MI GYV +F+EALE+FREMQ N+ EFTMVS++ ACA+LGA+ GE
Sbjct: 216 PERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGE 275
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
W+ ++ +++ V A+IDMY KCG ERAL VF + + W +++ GLA+NG
Sbjct: 276 WVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNG 335
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
YE EAI++F + + PD ++FI VLTAC H+G V++ +++F M E Y I P++ HY
Sbjct: 336 YEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHY 395
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
C++D LGRAG + EA I MP P++ IWG+LL+ACR HGN E+ + A++++ELD
Sbjct: 396 GCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDP 455
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
S Y+L+SN+YA ++E+ R + E I+KEPGCSLIE+DG +HEFVAG + HP
Sbjct: 456 ENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHP 515
Query: 482 KAPEVYLLLNDL 493
+ E+Y L +
Sbjct: 516 MSKEIYSKLESI 527
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/508 (39%), Positives = 319/508 (62%), Gaps = 36/508 (7%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFC-TSP-AGDINYAYLVFTQIKKPNLFIWNTIIR 60
++++ HA ++KTGL D +AS+++AF T+P ++YA+ + +I+ PN F N++IR
Sbjct: 24 EIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIESPNGFTHNSVIR 83
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++ SSTP A+ +F +ML+ P+ P + ++ + KA A +G Q+HG +K L
Sbjct: 84 AYANSSTPEIALTVFREMLL-GPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFMKSDLV 142
Query: 121 FDQFIHNTIIYMYANCGF-------------------------------LSEARLMFDEV 149
D F+ NT+I +Y G+ + EAR +FDE+
Sbjct: 143 TDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKGLVEEARALFDEM 202
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
+ E +V +WN MI G A G + E+R +FD M ++ VSWN+M++ Y + E LE+F
Sbjct: 203 E-ERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVF 261
Query: 210 REMQEQNI-KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
M + + +P FT+V++L+ACA LG++ QGEW+H ++ + E+ V TA++DMY K
Sbjct: 262 NMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSK 321
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG ++AL+VF K+ +S WNS++ GL+++G +A+++FS + KP+ I+FI V
Sbjct: 322 CGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGV 381
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+ACNH G ++QA+ F +M Y I+P+I+HY CMVD LGR G EEAE+L+ +P+D
Sbjct: 382 LSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADE 441
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
+I+ SLL AC++ G +E A++ A +++E + ES GYV MSNLYA+ +++EAME R
Sbjct: 442 ASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDEAMEVRG 501
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
M+ +++K PGCS+IEVDG VHEF+AG
Sbjct: 502 KMRAERVKKNPGCSMIEVDGVVHEFLAG 529
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/492 (40%), Positives = 319/492 (64%), Gaps = 20/492 (4%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+DLK++HA +IKT +DP+AA+ +L F S D++YA +F + +PN F +NT+I
Sbjct: 1 MQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLI 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R S+S+ P +A+L+FI+M+ ++P T+PS+FKA + R+G Q+HG VK GL
Sbjct: 61 RALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGL 120
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMF------DEVD--------TEFDVVAWNSMIIGL 165
+ D+F+ + ++ MY +CG + +A +F D D + DVV WN MI G
Sbjct: 121 DSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGY 180
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 225
+ GE++ +R LFD+M R+ VSWN MI+GY ++ FKEA+E+FREMQ + P+ T+V
Sbjct: 181 VRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLV 240
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
S+L A ++LGA+ G+W+H + V N ++ ++ +A+IDMY KCG E+ALQVF +PK+
Sbjct: 241 SVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKR 300
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
+ W++++ GLAM+G + + F ++ + + P +++I +L+AC+H+G VN+ + +F
Sbjct: 301 NVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFF 360
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
M ++P I+HY CMVD LGRAGLLEE+E+LI +MP PD +IW +LL AC+ HGN
Sbjct: 361 DHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGN 420
Query: 406 IEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI----EKEPGC 461
+EM K+ A+ ++EL ++S YV +SN+YA+ +E + RL+MKE+ + E C
Sbjct: 421 VEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVSARWHPEDAC 480
Query: 462 -SLIEVDGEVHE 472
++E E H+
Sbjct: 481 XDMLEEAPEFHQ 492
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/507 (40%), Positives = 317/507 (62%), Gaps = 9/507 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +K+ HAHLI TGL PI A+++L S G ++YA+ +F QI KP++FI+NT+I
Sbjct: 28 MNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVFIYNTMI 87
Query: 60 RGFSQ-SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
+ + ++ N++ +F+ M+ S P R T+ +FKA +G Q+ +K G
Sbjct: 88 KAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIG 147
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
LE + F+ N +I MYAN G + EAR +FD + D+ +WN MI G GEI ++ +F
Sbjct: 148 LESNLFVTNAMIRMYANWGLVDEARRVFD-WSLDQDLYSWNIMIGGYVGSGEIGRAKEMF 206
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D+M R+ VSW ++I+GYV+ FKEAL+LF EM + P+EFT+ S L ACA L A+
Sbjct: 207 DEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALD 266
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC----WNSMV 294
QG WIH ++ + ++N ++ +++DMY KCG + A +VF+ + GL WN+M+
Sbjct: 267 QGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHD--EYGLKLKVWPWNAMI 324
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G AM+G EAI LF ++ + P+ ++F+A+L AC+H V + + YF M +Y I
Sbjct: 325 GGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGI 384
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+P I+HY CMVD LGR+GLL+EAE+ + +MP PDA IWG+LL ACR H +IE ++ K
Sbjct: 385 EPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGK 444
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
I ELD + +VL++NLY+AS Q++EA R ++ +K PGCS IE++G H+F+
Sbjct: 445 IIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFL 504
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G R HP+ ++YL L+++ ++ G
Sbjct: 505 VGDRSHPQTKQLYLFLDEMTTKLKNAG 531
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/532 (38%), Positives = 313/532 (58%), Gaps = 34/532 (6%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+DLKKIHA LI TG KD A++ + A +I+YA+ VF I P+ + W T+IRG
Sbjct: 41 EDLKKIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRG 100
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
F ++ P A L F ++ ++ + T+ + KAY ++G +HG++VK G +
Sbjct: 101 FVEAKNPEKA-LEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCY 159
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F N +I+MY CG +++A L+FDE+ +VV WN+MI G CG+ + +RRLF +M
Sbjct: 160 DVFTRNALIHMYLKCGSITDAHLLFDEMPNH-NVVTWNTMITGCFGCGDTERARRLFGEM 218
Query: 182 VSRNT-------------------------------VSWNSMISGYVRNVKFKEALELFR 210
RN VSW SMIS YV+N + EALELF+
Sbjct: 219 PERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFK 278
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
EM + + S+L+ACA++GA+ G WIH ++ + + + TA++DMY KCG
Sbjct: 279 EMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCG 338
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
C + A VFNT+P+K L WN+M+ GLA++G+ A++LF ++S+ + P+ I+F+AVL+
Sbjct: 339 CIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLS 398
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC+H G V + F M + + I P ++HY CMVD L R GL+ EA+++IR+MP +P+
Sbjct: 399 ACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNV 458
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
+IWG+LL+AC+ HG + + I +L + YVL+SN++AA Q+ E + R +M
Sbjct: 459 VIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMM 518
Query: 451 KEVKIEKE-PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
K++ +EK+ PG S IE+D VH+F A RLH K EV ++ L ++ G
Sbjct: 519 KQMGVEKKIPGYSSIELDSVVHDFFAEDRLHSKWREVSTVIERLNTHLEVKG 570
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/492 (41%), Positives = 312/492 (63%), Gaps = 10/492 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M ++K+ H+ L++ GL+ + A SRI FC+ S GDINYA +FT + P+ F++NT+
Sbjct: 15 MAEVKQQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLYNTLF 74
Query: 60 RGF-SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
+ F S S TP ++L + ML + P T+PSL +A L + QLH V+K G
Sbjct: 75 KAFFSLSQTPSLSLLFYSHML-QHCVTPNAFTFPSLIRA---CKLEEEAKQLHAHVLKFG 130
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D + N +I++Y G L +AR +F + ++ +VV+W S++ G ++ G +DE+ R+F
Sbjct: 131 FGGDTYALNNLIHVYFAFGSLDDARRVFCTM-SDPNVVSWTSLVSGYSQWGLVDEAFRVF 189
Query: 179 DKM-VSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGA 236
+ M +N+VSWN+MI+ +V+ +F+EA LFR M+ E+ ++ F ++L+AC +GA
Sbjct: 190 ELMPCKKNSVSWNAMIACFVKGNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGA 249
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ QG WIH ++ L++ + T IIDMYCKCGC ++A VF + K +S WN M+ G
Sbjct: 250 LEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVKRVSSWNCMIGG 309
Query: 297 LAMNGYENEAIKLFSGLQSSNL-KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
AM+G +AI+LF ++ + PD I+F+ VLTAC HSG V + YF M + + I
Sbjct: 310 FAMHGKGEDAIRLFKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGID 369
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P+ +HY CMVD L RAG LEEA+K+I MP PDA + G+LL ACR HGN+E+ ++ +
Sbjct: 370 PTKEHYGCMVDLLARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNR 429
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+IELD S YV++ N+YA+ ++E+ R LM + ++KEPG S+IE++G V+EFVA
Sbjct: 430 VIELDPENSGRYVILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFSMIEMEGVVNEFVA 489
Query: 476 GGRLHPKAPEVY 487
GGR HP A +Y
Sbjct: 490 GGRDHPLAEAIY 501
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/495 (39%), Positives = 309/495 (62%), Gaps = 2/495 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +LKKIHAH++K L++ +++L C + + ++YA ++F Q++ PN+F +N IIR
Sbjct: 20 IAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLS-HVDYATMIFQQLENPNVFSYNAIIR 78
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++ + AI +F ML T P + T+P + K+ A L R G Q+H V K G +
Sbjct: 79 TYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHAHVCKFGPK 138
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
N +I MY CG +S A +++E+ TE D V+WNS+I G + G++ +R +FD+
Sbjct: 139 THAITENALIDMYTKCGDMSGAYQVYEEM-TERDAVSWNSLISGHVRLGQMKSAREVFDE 197
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R VSW +MI+GY R + +AL +FREMQ I+P E +++S+L ACA+LGA+ G
Sbjct: 198 MPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVG 257
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+WIH + + F N V A+++MY KCGC + A +FN + +K + W++M+ GLA +
Sbjct: 258 KWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIGGLANH 317
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G AI++F +Q + + P+ ++F+ VL+AC H+G N+ YF +M Y ++P I+H
Sbjct: 318 GKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMRVDYHLEPQIEH 377
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y C+VD LGR+G +E+A I MP PD+ W SLLS+CR H N+E+A A +Q+++L+
Sbjct: 378 YGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIHHNLEIAVVAMEQLLKLE 437
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
ES YVL++N+YA ++E R L++ +I+K PGCSLIEV+ V EFV+G
Sbjct: 438 PEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSLIEVNNLVQEFVSGDDSK 497
Query: 481 PKAPEVYLLLNDLGL 495
P + EV+ +L L L
Sbjct: 498 PFSQEVFWILKGLTL 512
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 328/572 (57%), Gaps = 73/572 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL--AFCTSPAGDINYAYLVFTQIKKPNLFIWNTI 58
++DL +IHAHLIKT L P A +L A P ++YA +F QI +P+ +N +
Sbjct: 37 IRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTS-MDYAVSIFRQIDEPDSPAYNIM 95
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IRGF+ +P AILLF +M S +QP T+P + K ++L +G Q+H ++K G
Sbjct: 96 IRGFTLKQSPHEAILLFKEMHENS-VQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCG 154
Query: 119 LEFDQFIHNTIIYM-------------------------------YANCGFLSEARLMFD 147
F+ NT+I+M Y G E +F
Sbjct: 155 FGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFH 214
Query: 148 E---VDTEFDVVA------------------W-----------------NSMIIGLAKCG 169
E +D FD V W S++ AKCG
Sbjct: 215 EMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCG 274
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
++D +RRLFD+M R+ V+W++MISGY + + +EAL+LF EMQ+ NI P+E TMVS+L+
Sbjct: 275 QVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILS 334
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
+CA LGA+ G+W+H F+ +L + TA++D Y KCG E +++VF +P K +
Sbjct: 335 SCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLS 394
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
W ++ GLA NG +A++ F + N++P+ ++FI VL+AC+H+G V++ +D F M+
Sbjct: 395 WTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMS 454
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ I+P I+HY CMVD LGRAGL+EEA + I++MP P+A+IW +LL++C+ H N+E+
Sbjct: 455 RDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIG 514
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGE 469
+++ KQ+I L+ S Y+L+SN+YA+ ++E+A++ R MKE I+K PGCSLIE+DG
Sbjct: 515 EESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGV 574
Query: 470 VHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+HEF A +H ++ E+Y + D+ I+ G
Sbjct: 575 IHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAG 606
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/513 (40%), Positives = 300/513 (58%), Gaps = 45/513 (8%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K LK+IHA +++TGL DP +ASR++ A SP ++YA VF QI PNL+ WNT+IR
Sbjct: 49 KQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIR 108
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++ SS P ++L+F+ ML SP P + T+P L KA ++L G HG V+K L
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D FI N++I+ YA CG L +F DVV+WNSMI + G +E
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNXPRR-DVVSWNSMITAFVQGGCPEE------- 220
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
ALELF+EM+ QN+KP+ TMV +L+ACAK G
Sbjct: 221 ------------------------ALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG 256
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF----- 295
W+H+++ N + + A++DMY KCG E A ++F+ +P+K + W +M+
Sbjct: 257 RWVHSYIERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKI 316
Query: 296 -------GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
GLAM+G+ +AI LFS +Q +KP+ ++F +L AC+H G V + + +F M
Sbjct: 317 GEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQM 376
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
Y + P +KHY+CMVD LGRAGLLEEA +LI MP P A +WG+LL AC H N+ +
Sbjct: 377 ELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVL 436
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
A+QA Q+IEL+ YVL+SN+YA + +++ R LM++V ++KEPGCS IEVDG
Sbjct: 437 AEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDG 496
Query: 469 EVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
VHEF+ G HP A ++Y L+++ ++ +G
Sbjct: 497 IVHEFLVGDNSHPSAKKIYAKLDEIVARLETIG 529
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/497 (41%), Positives = 312/497 (62%), Gaps = 35/497 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNTIIRG 61
LK+IHA +I G + +A R L + +S A G + YA+ +F I +P+ F+WNT+IRG
Sbjct: 29 LKQIHASMIVKGFNSN-TSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRG 87
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+QS +P NAI L+ M ++P + T+P + KA +L + G +HGRV + G E
Sbjct: 88 SAQSPSPLNAISLYSQM-ENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFES 146
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFD---------------------------EVDTEF- 153
+ F+ NT+IY +ANCG L+ AR +FD ++ E
Sbjct: 147 NTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMP 206
Query: 154 --DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
D+V+WN MI G AK GE++ +R+LFD++ R+ V+WN+MI+GYV ++ALE+F E
Sbjct: 207 VKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEE 266
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF-ELNTIVVTAIIDMYCKCG 270
M+ P E TM+SLL+AC LG + G+ IH + F +L+ ++ A+IDMY KCG
Sbjct: 267 MRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCG 326
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
RAL+VF + +K +S WNS++ GLA +G+ ++I LF+ ++ ++PD I+F+ VL
Sbjct: 327 SIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLV 386
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC+H+G+V + + YF LM + Y I+P+I+HY CMVD LGRAGLL EA I +M +P+A
Sbjct: 387 ACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNA 446
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
I+W +LL ACR HGN+E+ ++A Q++++ +ES YVL+SN+YA+ +++ + R LM
Sbjct: 447 IVWRTLLGACRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLM 506
Query: 451 KEVKIEKEPGCSLIEVD 467
+ + KE GCSLIE D
Sbjct: 507 DDSGVRKEAGCSLIEGD 523
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/495 (38%), Positives = 302/495 (61%), Gaps = 8/495 (1%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
++ +HAH++K G+ ++ A+ ++ + L+ ++ ++ +WN +I G +
Sbjct: 62 VRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALL-SERERDTPVVWNALISGHN 120
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQ-LGLARDGAQLHGRVVKQGLEFD 122
+ A F+DM + P +TY S+ A + G G Q+HGRVV G+ D
Sbjct: 121 RCRRFGEACCSFVDM-ARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPD 179
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ N ++ MYA C + A +FD + VV+W S++ GL + G +DE+R LF +M
Sbjct: 180 LRVENALVDMYAECADMESAWKLFDGMQVR-SVVSWTSLLSGLTRLGRVDEARDLFGRMP 238
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+TVSW +MI GYV+ +F+EALE+FREMQ N+ EFTMVS++ ACA+LGA+ GEW
Sbjct: 239 ERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEW 298
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+ ++ +++ V A+IDMY KCG ERAL VF + + W +++ GLA+NGY
Sbjct: 299 VRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGY 358
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
EAI++F + + PD ++FI VLTAC H+G V++ +++F M ETY I P++ HY
Sbjct: 359 GEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYG 418
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C++D GRAG + EA I MP P++ IWG+LL+ACR HGN E+ + ++++++D
Sbjct: 419 CIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPE 478
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
S Y L+SN+YA ++E+ R + E I+KEPGCSLIE++G +HEFVAG + HP
Sbjct: 479 NSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPM 538
Query: 483 APEVYL----LLNDL 493
+ E+Y ++NDL
Sbjct: 539 SKEIYCKLESIINDL 553
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 159/385 (41%), Gaps = 67/385 (17%)
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
+A+ + ML + P T+P L KA A+ A +H VVK G+ + + ++
Sbjct: 26 DAVAGYARMLARGAM-PDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSL 84
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 189
+ YA G + AR + E + + VV WN
Sbjct: 85 VTAYAAGGDGAAARALLSERERDTPVV-WN------------------------------ 113
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK-LGAIRQGEWIHNFLV 248
++ISG+ R +F EA F +M P+ T VS+L+AC K G + G +H +V
Sbjct: 114 -ALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVV 172
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA---------- 298
+ + V A++DMY +C E A ++F+ + + + W S++ GL
Sbjct: 173 GSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARD 232
Query: 299 ----------------MNGYEN-----EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK 337
++GY EA+++F +Q SN+ D + ++V+TAC G
Sbjct: 233 LFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGA 292
Query: 338 VNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLL 397
+ ++ + IK + ++D + G +E A + + M D W +++
Sbjct: 293 LEMG-EWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDM-HHRDKFTWTAII 350
Query: 398 SACRKHGNIEMAKQAAKQIIELDKN 422
+G E A + ++I + +
Sbjct: 351 LGLAVNGYGEEAIEMFHRMIGVSET 375
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/485 (41%), Positives = 299/485 (61%), Gaps = 3/485 (0%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+LK+IHA ++K+GL +DP A ++ L+FC S + + F +P+ F+WN +IRG
Sbjct: 26 ELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFLWNLMIRGL 85
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
S S P ++LL+ ML S T+P L KA + L ++ Q+H + K G D
Sbjct: 86 SCSDQPDRSLLLYHRMLCCSAPH-NAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHD 144
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ N++I YA G A L+FD + E D V+WNS+I G K GE+D + LF KM
Sbjct: 145 IYAVNSLINSYAVTGNFKHAHLLFDRIQ-EPDAVSWNSVIKGYVKAGEMDMALTLFRKMP 203
Query: 183 SRNT-VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+N +SW +MISGYV+ KEAL+LF EMQ N+ P ++ S L+AC++LGA+ QG+
Sbjct: 204 EKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGK 263
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
WIH++ +++++ +IDMY KCG E AL VF + K + W +++ G A +G
Sbjct: 264 WIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHG 323
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
EAI F +Q+ +KP+ I+F AVLTAC+++G V + K F + Y +KP+I+HY
Sbjct: 324 LGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHY 383
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD LGRAGLL EA + I+ MP P+A+IWGSLL AC+ H NIE+ ++ + +IE+D
Sbjct: 384 GCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDS 443
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
N YV M+N++A ++++A E R LM+E + K PGCS I ++G HEF+AG R H
Sbjct: 444 NHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDRSHA 503
Query: 482 KAPEV 486
+ E+
Sbjct: 504 EIQEI 508
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 155/334 (46%), Gaps = 41/334 (12%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
++ +IHAH+ K G D I A L + G+ +A+L+F +I++P+ WN++I+G
Sbjct: 127 QETTQIHAHITKFGYGHD-IYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKG 185
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ ++ A+ LF M P + +++ ++ Y Q G+ ++ QL + +
Sbjct: 186 YVKAGEMDMALTLFRKM----PEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPP 241
Query: 122 DQFIHNTIIYMYANCGFLSEARLMF---DEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D + + + G L + + + ++ T D V +I AKCGE++E+ +F
Sbjct: 242 DNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVF 301
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
M +++ W ++ISGY + +EA+ F EMQ +KP+ T ++L AC+ G +
Sbjct: 302 KNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVE 361
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+G+ + NTI ER + T+ G MV L
Sbjct: 362 EGKSV----------FNTI---------------ERDYNLKPTIEHYG-----CMVDLLG 391
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
G NEA + +Q LKP+ + + ++L AC
Sbjct: 392 RAGLLNEANRF---IQKMPLKPNAVIWGSLLKAC 422
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/478 (39%), Positives = 304/478 (63%), Gaps = 5/478 (1%)
Query: 22 AASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVT 81
AA LA C+S A A +F +L WNT+I G+ + PR A+ +F M+
Sbjct: 160 AAMHFLAVCSSMA----EARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGD 215
Query: 82 SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSE 141
+ P +T + AQL G +LHG V G+ + N ++ MY CG L
Sbjct: 216 GAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLER 275
Query: 142 ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVK 201
A+ +F+ +D + +V+W +MI+G A+ G +D++R++FD+M R+ WN++++GYV+ +
Sbjct: 276 AKSVFEGIDKK-TIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKR 334
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTA 261
KEAL LF +MQE ++P + TMV+LL+AC++LGA+ G W+H+++ L+ ++ T
Sbjct: 335 GKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTN 394
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
++DMY KCG E+A++VF +P+K W +M+ GLA +G+ + AIK F + L+PD
Sbjct: 395 LVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPD 454
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
I+FI VL+AC H+G V + +++F+LM Y ++ +KHYSCMVD LGRAG L+EAE L+
Sbjct: 455 EITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLV 514
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
+MP +PDA++WG+L ACR HGNI + ++AA +++ELD +S YVL++N+YA + +
Sbjct: 515 NTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRK 574
Query: 442 EAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQE 499
+A + R++M+ + +EK PGCS IE++G VHEF+ + H +Y L+++ L I+
Sbjct: 575 KADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQIEH 632
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 212/463 (45%), Gaps = 84/463 (18%)
Query: 4 LKKIHAHLIKTGLAKD----PIAASRILAFCTS------PAGDINYAYLVFTQIKKPN-L 52
L ++HAHL+ GL P+A+ + A S P ++ L+ + P+
Sbjct: 24 LLQLHAHLLTAGLMSSRSPFPLASRLVEALAHSDDPRHSPRPLLHALALLASLPTPPDSA 83
Query: 53 FIWNTIIRGFSQSSTPRNAIL----LFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA 108
+N +R S T R + L+ +L ++ +P LT+P L KA A+L G
Sbjct: 84 SPYNAALRALSLC-TDRGLVTRCLPLYCSLLRSA--RPDHLTFPFLLKACARLQERNYGN 140
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
+ G V+ G D F+ N ++ LA C
Sbjct: 141 AVLGNVLSLGFHADVFVVNAAMHF--------------------------------LAVC 168
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF-REMQEQNIKPSEFTMVSL 227
+ E+R+LFD R+ VSWN++I GYVR +EALE+F R + + + P E TM+ +
Sbjct: 169 SSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGV 228
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
++ A+L + G +H ++ ++ ++ ++DMY KCG ERA VF + KK +
Sbjct: 229 VSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTI 288
Query: 288 SCWNSMVFGLA--------------------------MNGY-----ENEAIKLFSGLQSS 316
W +M+ G A M GY EA++LF +Q +
Sbjct: 289 VSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEA 348
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE 376
++PD I+ + +L+AC+ G + + + ++ S+ + +VD + G +E+
Sbjct: 349 MVEPDDITMVNLLSACSQLGALEMGM-WVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEK 407
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
A ++ + +P + +A+ W +++S HG+ ++A + +++IEL
Sbjct: 408 AIRVFKEIP-EKNALTWTAMISGLANHGHADVAIKYFQRMIEL 449
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 95/208 (45%), Gaps = 5/208 (2%)
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
++ +P T LL ACA+L G + +++ F + VV A + C
Sbjct: 114 RSARPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAE 173
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN-LKPDYISFIAVLTACN 333
A ++F+ + L WN+++ G G EA+++F + + PD ++ I V++
Sbjct: 174 ARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSA 233
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII- 392
+ + + E++ ++ +++ + ++D + G LE A+ + + D I+
Sbjct: 234 QLRDLELGRRLHGYV-ESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGI--DKKTIVS 290
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELD 420
W +++ + G ++ A++ ++ E D
Sbjct: 291 WTTMIVGYAQFGLMDDARKVFDEMPERD 318
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/571 (38%), Positives = 315/571 (55%), Gaps = 74/571 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+IHA +++T L DP +AS+I+AFC +G + YA LVF QI P F N+II
Sbjct: 53 MSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSII 112
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG++ + PR AIL F +++ + P R T+PSLFK+ G+ +G QLH K G
Sbjct: 113 RGYTNKNLPRQAIL-FYQLMMLQGLDPDRFTFPSLFKS---CGVLCEGKQLHCHSTKLGF 168
Query: 120 E-------------------------FDQFIHN------TIIYMYANCGFLSEARLMF-- 146
FD+ ++ T+I YA EA +F
Sbjct: 169 ASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRR 228
Query: 147 ------------------------------------DEVDTEFDVVAWNSMIIGLAKCGE 170
DE F V ++++ KCG
Sbjct: 229 MEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGC 288
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
+R LF+KM +N WN MI+G+V + ++EAL LF EMQ +K + TM SLL A
Sbjct: 289 YPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIA 348
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
C LGA+ G+W+H ++ E++ + TA++DMY KCG E A++VF +P+K + W
Sbjct: 349 CTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTW 408
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
+++ GLAM G +A++LF +Q S +KPD I+F+ VL AC+H+G VN+ YF M
Sbjct: 409 TALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPN 468
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
Y I+PSI+HY CMVD LGRAG + EAE LI++MP PD + LLSACR HGN+ +A+
Sbjct: 469 KYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAE 528
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
+AA+Q+IELD YVL+SN+Y++ +E A + R LM E I+K PGCS IEV G V
Sbjct: 529 RAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVV 588
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
HEFV G HP++ E+Y L+D+ ++ G
Sbjct: 589 HEFVKGDVSHPQSSEIYETLDDMMRRLKSAG 619
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/494 (40%), Positives = 310/494 (62%), Gaps = 11/494 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +K++H+HLI + DP AA +I++ F S DI++AY +F + FIWNTII
Sbjct: 23 MSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSLPHRTTFIWNTII 82
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA---YAQLGLARDGAQLHGRVVK 116
R F + + A+ L+ +ML T + P T+ + +A + +GLA H +V+K
Sbjct: 83 RIFVEKNENATALSLYKNMLQTGFL-PNNYTFSFVLRACTDNSPVGLAS-----HAQVIK 136
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G E F+ N +I++YAN + AR +FD V T DV+ W ++I G K G ++ +R
Sbjct: 137 LGWESYDFVLNGLIHLYANWSSVEAARKLFD-VSTCRDVITWTALINGYVKSGHVEFARE 195
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
LFD+M RN VSW++MI+GYV F+EALELF ++Q ++P+ +V L AC+ LG+
Sbjct: 196 LFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTACSYLGS 255
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G WIH ++ N EL+ ++ TA++DMY KCGC E A VF +P K + S++ G
Sbjct: 256 LDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAFAFTSLISG 315
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA +G +AI+LF +QS + P+ ++FI VL+AC+ G V++ F M+ Y I+P
Sbjct: 316 LANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNCMSVVYGIEP 375
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++HY CMVD LGRAGLLEEA++L+R MP +PD+ + G+LL++CR HG++E+ K+ + +
Sbjct: 376 GVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVELGKETVESL 435
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+E + +VL+SN+YA+S Q++ ++ R M K++K PGCS IE+DG V EF+AG
Sbjct: 436 VERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVPGCSSIEIDGSVSEFIAG 495
Query: 477 GRLHPKAPEVYLLL 490
+ + +V L+L
Sbjct: 496 DMSYLRVEDVMLVL 509
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/498 (39%), Positives = 308/498 (61%), Gaps = 4/498 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K H +IK L D + ++ F + G++ Y VF I + ++ WN++I F Q
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHF-YAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQ 214
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
P A+ LF +M T ++P +T + A A+ G +H + + +
Sbjct: 215 GGCPEEALELFQEM-ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLT 273
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MY CG + +A+ +FD++ E D+V+W +M++G AK GE D ++ +FD M ++
Sbjct: 274 LSNAMLDMYTKCGSVEDAKRLFDKM-PEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQ 332
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+ +WN++IS Y + K KEALELF E+Q + KP E T+VS L+ACA+LGA+ G WI
Sbjct: 333 DIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWI 392
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++ +LN + T++IDMYCKCG ++AL VF++V +K + W++M+ GLAM+G+
Sbjct: 393 HVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHG 452
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+AI LFS +Q +KP+ ++F +L AC+H G V + + +F M Y + P +KHY+C
Sbjct: 453 KDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYAC 512
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAGLLEEA +LI MP P A +WG+LL AC H N+ +A+QA Q+IEL+
Sbjct: 513 MVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGN 572
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
YVL+SN+YA + +++ R LM++V ++KEPGCS IEVDG VHEF+ G HP A
Sbjct: 573 HGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSA 632
Query: 484 PEVYLLLNDLGLLIQEMG 501
++Y L+++ ++ +G
Sbjct: 633 KKIYAKLDEIVARLETIG 650
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 221/437 (50%), Gaps = 67/437 (15%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K LK+IHA +++TGL DP +ASR++ A SP ++YA VF QI PNL+ WNT+IR
Sbjct: 49 KQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIR 108
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++ SS P ++L+F+ ML SP P + T+P L KA ++L G HG V+K L
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D FI N++I+ YA CG L +F + DVV+WNSMI + G +E
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNIPRR-DVVSWNSMITAFVQGGCPEE------- 220
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
ALELF+EM+ QN+KP+ TMV +L+ACAK G
Sbjct: 221 ------------------------ALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFG 256
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA-- 298
W+H+++ N + + A++DMY KCG E A ++F+ +P+K + W +M+ G A
Sbjct: 257 RWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKI 316
Query: 299 ------------------------MNGYEN-----EAIKLFSGLQ-SSNLKPDYISFIAV 328
++ YE EA++LF LQ S KPD ++ ++
Sbjct: 317 GEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVST 376
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC G ++ + + + +K + + ++D + G L++A + S+
Sbjct: 377 LSACAQLGAMDLG-GWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERK- 434
Query: 389 DAIIWGSLLSACRKHGN 405
D +W ++++ HG+
Sbjct: 435 DVFVWSAMIAGLAMHGH 451
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/490 (38%), Positives = 306/490 (62%), Gaps = 3/490 (0%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+LK+IH L+K G + + SR+L + + ++ YA +VF +I PN +WNT+IR
Sbjct: 26 ELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIRA 85
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+S S+ P A+LL+ ML S I T+P L KA + L + Q+H +++K+G
Sbjct: 86 YSNSNDPEEALLLYHQMLHHS-IPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGS 144
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ + N+++ +YA G + A ++FD + + D+V+WN+MI G KCG ++ + ++F M
Sbjct: 145 EVYATNSLLRVYAISGSIKSAHVLFDLLPSR-DIVSWNTMIDGYIKCGNVEMAYKIFQAM 203
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+N +SW SMI G+VR KEAL L ++M IKP + T+ L+ACA LGA+ QG+
Sbjct: 204 PEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGK 263
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
WIH ++ N +++ ++ A+IDMY KCG ++AL VF+ + KK + W +++ G A++G
Sbjct: 264 WIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHG 323
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+EA+ F+ +Q + +KP +F AVLTAC+H+G V + K F M+ Y +KP ++HY
Sbjct: 324 KGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHY 383
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD LGRAG L+EA++ + SMP P+A IWGSLL+AC H ++E+ K+ K +IELD
Sbjct: 384 GCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDP 443
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
Y+ +++++AA+ +++EA + R +K + PGCS I ++G HEF AG HP
Sbjct: 444 EHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEFFAGAEPHP 503
Query: 482 KAPEVYLLLN 491
E+Y + N
Sbjct: 504 HVREMYDMSN 513
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/498 (40%), Positives = 310/498 (62%), Gaps = 36/498 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASR-ILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+IHA LI G + A I A + +G INYA+ VF QI +P++F+WNT++RG
Sbjct: 29 LKQIHATLIIKGFNSNRAALRELIFAGAMTISGAINYAHQVFAQITEPDIFMWNTMMRGS 88
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
SQS P +LL+ M ++P + T+ L K +L + G +HG+V+K G E +
Sbjct: 89 SQSKNPSKVVLLYTQM-ENRGVKPDKFTFSFLLKGCTRLEWRKTGFCVHGKVLKYGFEVN 147
Query: 123 QFIHNTIIYMYANCGFL-------------------------------SEARLMFDEVDT 151
F+ NT+IY ++NCG L AR +FDE+
Sbjct: 148 SFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVARQIFDEMPV 207
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ D+V+WN MI G K GE++ +R LFD+ ++ V+WN+MI+GYV + ++ALE+F E
Sbjct: 208 K-DLVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEE 266
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH-NFLVTNCFELNTIVVTAIIDMYCKCG 270
M+ P E TM+SLL+ACA LG ++ G +H + +L+ ++ A++DMY KCG
Sbjct: 267 MRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAKCG 326
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVL 329
E ALQVF + +K ++ WNS++ GLA +G+ E+IKLF+ +Q+ N+KP+ I+F+ V+
Sbjct: 327 SIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVI 386
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
AC+H+G V + + YF LM E Y I+P++ H+ CMVD LGRAGLL EA +LI M +P+
Sbjct: 387 VACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPN 446
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
AIIW +LL ACR HGN+E+ + A +++++L ++ES YVL+SN+YA++ +++ A E R L
Sbjct: 447 AIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYASAGEWDGAEEVRKL 506
Query: 450 MKEVKIEKEPGCSLIEVD 467
M + + KE G SLIE D
Sbjct: 507 MDDGGVRKEAGRSLIEAD 524
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/492 (39%), Positives = 307/492 (62%), Gaps = 6/492 (1%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+LK++HA +I GL++D S+IL F S +GDINY+Y VF+Q+ P +F WNTIIRG
Sbjct: 29 ELKQLHAVVISCGLSQDDPFISKILCFSALSNSGDINYSYRVFSQLSSPTIFSWNTIIRG 88
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+S S P ++ +F+ ML + P LTYP L KA A+L G +H ++K G E
Sbjct: 89 YSNSKNPIQSLSIFLKMLRLG-VAPDYLTYPFLVKASARLLNQETGVSVHAHIIKTGHES 147
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D+FI N++I+MYA CG A+ +FD + + +VV+WNSM+ G AKCGE+ +++ F+ M
Sbjct: 148 DRFIQNSLIHMYAACGNSMWAQKVFDSIQQK-NVVSWNSMLDGYAKCGEMVMAQKAFESM 206
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ SW+S+I GYV+ ++ EA+ +F +MQ K +E TMVS+ ACA +GA+ +G
Sbjct: 207 SEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMVSVSCACAHMGALEKGR 266
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC--WNSMVFGLAM 299
I+ ++V N L ++ T+++DMY KCG E AL +F V K WN+++ GLA
Sbjct: 267 MIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFRRVSKSQTDVLIWNAVIGGLAT 326
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G E++KLF +Q + PD ++++ +L AC H G V +A +F +++ + P+ +
Sbjct: 327 HGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGLVKEAWFFFESLSKC-GMTPTSE 385
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY+CMVD L RAG L A + I MP++P A + G+LLS C H N+ +A+ +++IEL
Sbjct: 386 HYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGALLSGCINHRNLALAEIVGRKLIEL 445
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ N Y+ +SN+YA ++++A R M+ ++K PG S +E+ G +H F+A +
Sbjct: 446 EPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRGVKKSPGFSFVEISGVLHRFIAHDKT 505
Query: 480 HPKAPEVYLLLN 491
HP + E Y +LN
Sbjct: 506 HPDSEETYFMLN 517
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/492 (38%), Positives = 313/492 (63%), Gaps = 3/492 (0%)
Query: 9 AHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTP 68
H+ K G + D + + F S +G + A +F + ++ WNT+I G+ +S P
Sbjct: 145 GHVQKLGFSADVFVVNAGVHF-WSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLP 203
Query: 69 RNAILLFIDMLVTS-PIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
R A+ LF ++ ++P +T AQ+G G +LH V +G+ + N
Sbjct: 204 REALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMN 263
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
++ MY CG L A+ +F+ +D + VV+W +MI+G A+ G ++++R LFD+M R+
Sbjct: 264 AVMDMYVKCGSLELAKSVFERIDNK-TVVSWTTMIVGHARLGMMEDARMLFDEMPERDVF 322
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
WN++++GYV+N + KEA+ LF EMQE + P+E TMV+LL+AC++LGA+ G W+H+++
Sbjct: 323 PWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYI 382
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
+ L+ + T+++DMY KCG ++A+ +F +P K W +M+ GLA +G+ +EAI
Sbjct: 383 DRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAI 442
Query: 308 KLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
+ F + L+PD I+FI VL+AC H+G V + + +F+LM E Y ++ +KHYSCM+D
Sbjct: 443 EYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDL 502
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGY 427
LGRAG L+EAE+L+ +MP DPDA++WG+L ACR HGNI + ++AA +++ELD ++S Y
Sbjct: 503 LGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIY 562
Query: 428 VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
VL++N+YA + ++A + R++M+ + +EK PGCS IE++G VHEF+ + H +Y
Sbjct: 563 VLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTIAIY 622
Query: 488 LLLNDLGLLIQE 499
L+ + L ++
Sbjct: 623 DCLHGITLQMKH 634
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 180/397 (45%), Gaps = 93/397 (23%)
Query: 69 RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNT 128
R+ + L+ +L +S +P LT+P L KA A+L GA + G V K G D F+ N
Sbjct: 102 RHCLPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNA 161
Query: 129 IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS 188
++ ++ G SM++ +RRLFD+ +R+ VS
Sbjct: 162 GVHFWSVSG----------------------SMVL----------ARRLFDESPARDVVS 189
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQN--IKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
WN++I GYVR+ +EALELF + E ++P E TM+ ++ CA++G + G+ +H F
Sbjct: 190 WNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEF 249
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA-------- 298
+ + ++ A++DMY KCG E A VF + K + W +M+ G A
Sbjct: 250 VDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDA 309
Query: 299 ------------------MNGY-----ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
M GY EAI LF +Q S + P+ I+ + +L+AC+
Sbjct: 310 RMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQL 369
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHY-------------SCMVDALGRAGLLEEAEKLIR 382
G + + HY + +VD + G +++A + +
Sbjct: 370 GALEMGM--------------WVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFK 415
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
+P D +A+ W +++ HG+ + A + +++I+L
Sbjct: 416 EIP-DKNALTWTAMICGLANHGHADEAIEYFQRMIDL 451
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/499 (38%), Positives = 316/499 (63%), Gaps = 3/499 (0%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +IH ++ L +D + S+ + CTS G +YA+ +F+ P+L ++NT I+ S
Sbjct: 40 LYQIHGFMLHRALDQDNLFLSQFIDACTS-LGLSSYAFSIFSNKTHPDLRLYNTAIKALS 98
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
++S+P NAI L+ + + ++P + PS+ KA +L G Q+H + V L+ D
Sbjct: 99 KTSSPINAIWLYTRIRIDG-LRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDV 157
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ ++I MY++CGF+S+AR +FD V + DV WN+M+ G K GE+ +R++F++M
Sbjct: 158 NVATSLIQMYSSCGFVSDARKLFDFVGFK-DVALWNAMVAGYVKVGELKSARKVFNEMPQ 216
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
RN +SW ++I+GY + + EA+ELFR+MQ + ++P E M+++L+ACA LGA+ GEWI
Sbjct: 217 RNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWI 276
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
HN++ + + A+IDMY K G RAL+VF + +K + W++++ LA++G
Sbjct: 277 HNYIEKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGLG 336
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EAI +F ++ + ++P+ ++F+A+L+AC+H G V+ + YF M YKI+P I+HY C
Sbjct: 337 GEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGC 396
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
M+D L RAG L+EA+KL+ MP + +A+IWGSLL+A H + E+A+ A K + +L+
Sbjct: 397 MIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGN 456
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S YVL+SN YAA ++ E+ R LM+ ++K PG S+IE++ V+EF+AG +
Sbjct: 457 SGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQV 516
Query: 484 PEVYLLLNDLGLLIQEMGS 502
E+Y +L + L ++ GS
Sbjct: 517 HEIYHVLCKIILQLKMAGS 535
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/497 (39%), Positives = 311/497 (62%), Gaps = 4/497 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LKKIHAH++K L++ +++L C + G ++YA L+F Q+ PN+F +N IIR
Sbjct: 23 ITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDN-LGHVSYATLLFKQLLHPNIFTYNAIIR 81
Query: 61 GFSQSSTPRNAILLFIDMLV--TSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
++ + +AI +F+ ML T+ + P + T+P + K+ + R G Q+HG V K G
Sbjct: 82 TYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFG 141
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+F N +I MY G L+ A +F+E+ + DV++WNS+I G K G+++ +R LF
Sbjct: 142 ADFHCITENALIDMYTKFGDLTNACKVFEEM-SHRDVISWNSLIFGYVKLGQMNSARELF 200
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D M R VSW +MI+GY R + +AL++FREMQ I+P E +++++L ACA+LGA+
Sbjct: 201 DDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALE 260
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+WIH + N F T + A+I+MY KCGC + A +F+ + +K + W++M+ GLA
Sbjct: 261 VGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLA 320
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G EAI+LF + + P+ I+F+ VL AC+H+G ++ YF +M+ +Y I+P I
Sbjct: 321 NHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEI 380
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C++D LGR+G L +A I MP PD+ IW SLLS+CR H N+++A A KQ++E
Sbjct: 381 EHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLME 440
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ ES YVL++N+YA ++E+ R L++ +I+K PG S IEV+ V EFV+
Sbjct: 441 LEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDD 500
Query: 479 LHPKAPEVYLLLNDLGL 495
P + EV+ +L L L
Sbjct: 501 SKPFSQEVFWILEGLAL 517
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/495 (38%), Positives = 303/495 (61%), Gaps = 3/495 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
MK+L +IH L+K G ++ + S +L ++ ++ Y +VF I PN IWNT++
Sbjct: 23 MKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSISSPNTVIWNTML 82
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R +S S+ P A+LL+ ML S + T+P L KA + L + Q+H ++K+G
Sbjct: 83 RAYSNSNDPEAALLLYHQMLHNS-VPHNSYTFPFLLKACSALSAFEETQQIHAHIIKRGF 141
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ + N+++ +YA G + A ++F+++ T D+V+WN MI G K G +D + ++F
Sbjct: 142 GLEVYATNSLLRVYAISGNIQSAHVLFNQLPTR-DIVSWNIMIDGYIKFGNLDMAYKIFQ 200
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M +N +SW +MI G+VR KEAL L ++M IKP T+ L+ACA LGA+ Q
Sbjct: 201 AMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQ 260
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+WIH ++ N +++ ++ + DMY KCG E+AL VF+ + KK + W +++ GLA+
Sbjct: 261 GKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAIIGGLAI 320
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G EA+ F+ +Q + + P+ I+F A+LTAC+H+G + K F M+ Y IKPS++
Sbjct: 321 HGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSME 380
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD +GRAGLL+EA + I SMP P+A IWG+LL+AC+ H + E+ K+ K +IEL
Sbjct: 381 HYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIEL 440
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D + S Y+ ++++YAA+ ++ + + R +K + PGCS I ++G VHEF AG
Sbjct: 441 DPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSITLNGVVHEFFAGDGS 500
Query: 480 HPKAPEVYLLLNDLG 494
HP E+Y + N L
Sbjct: 501 HPHIQEIYGMPNLLA 515
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/497 (37%), Positives = 318/497 (63%), Gaps = 6/497 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++ +K++ ++K+GL D + ++ + G + VF ++ + ++ WN +I
Sbjct: 148 VREGEKVYGFVVKSGLEFDTYVCNSLMDM-YAEVGRVQNLRQVFEEMPQRDVVSWNVLIS 206
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ + +A+ +F M S ++P T S A L + G ++H R V++ L
Sbjct: 207 GYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIH-RYVREQLG 265
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
F I N ++ MY CG LS AR +F+++ + V+ W SM+ G CG++DE+R LF++
Sbjct: 266 FTIKIGNALVDMYCKCGHLSIAREIFNDMPIK-TVICWTSMVSGYVNCGQLDEARELFER 324
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
R+ V W +MI+GYV+ +F +A+ LFREMQ + + P FT+V+LL CA+LG + QG
Sbjct: 325 SPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQG 384
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+WIH ++ N ++ +V TA+I+MY KCG E++L++FN + +K + W S++ GLAMN
Sbjct: 385 KWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMN 444
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G ++A++LF+ + + +KPD I+FI VL+AC+H G V + + +F MT Y+I+P ++H
Sbjct: 445 GKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEH 504
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAII---WGSLLSACRKHGNIEMAKQAAKQII 417
Y C++D LGRAG L+EAE+LI P+ + +I +G+LLSACR HGN+EM ++ AK+++
Sbjct: 505 YGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLV 564
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
++ +S + L++N+YA++ ++E+ + R MK++ ++K PGCS +EV+G VHEF+ G
Sbjct: 565 GIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGD 624
Query: 478 RLHPKAPEVYLLLNDLG 494
HP+ E+Y +L+ +
Sbjct: 625 ASHPEMREIYSMLDSIA 641
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 224/451 (49%), Gaps = 69/451 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTII 59
M+ LK+I +++TG + ++ + CT P+ G+++YA +F I P LFI+N +I
Sbjct: 45 MQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVI 104
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ F+++ + R A+LLF L + P TYP +FKA LG R+G +++G VVK GL
Sbjct: 105 KAFTKNGSFRKAVLLF-RQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGL 163
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
EFD ++ N+++ MYA G + R +F+E+ + DVV+WN +I G KC RR
Sbjct: 164 EFDTYVCNSLMDMYAEVGRVQNLRQVFEEM-PQRDVVSWNVLISGYVKC------RR--- 213
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIR 238
+++A+++FR MQ+Q +++P+E T+VS L+AC L +
Sbjct: 214 ----------------------YEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLE 251
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+ IH + V + A++DMYCKCG A ++FN +P K + CW SMV G
Sbjct: 252 LGKEIHRY-VREQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYV 310
Query: 299 --------------------------MNGYE-----NEAIKLFSGLQSSNLKPDYISFIA 327
+NGY ++A+ LF +Q + PD + +A
Sbjct: 311 NCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVA 370
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
+LT C G + Q K + E KI + +++ + G +E++ ++ + +
Sbjct: 371 LLTGCAQLGTLEQGKWIHGYIDEN-KIMIDAVVGTALIEMYAKCGFIEKSLEIFNGL-KE 428
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
D W S++ +G A + ++++
Sbjct: 429 KDTASWTSIICGLAMNGKTSKALELFAEMVQ 459
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 145/290 (50%), Gaps = 10/290 (3%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G + + R+F+ + +N +I + +N F++A+ LFR+++E+ + P FT +
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
A LG +R+GE ++ F+V + E +T V +++DMY + G + QVF +P++ +
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
WN ++ G +A+ +F + Q S+L+P+ + ++ L+AC + K+
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRY 259
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ E ++ +IK + +VD + G L A ++ MP I W S++S G ++
Sbjct: 260 VRE--QLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKT-VICWTSMVSGYVNCGQLD 316
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK 457
A++ +++ VL + + QF + L +E++I++
Sbjct: 317 EAREL------FERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKR 360
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/555 (36%), Positives = 318/555 (57%), Gaps = 66/555 (11%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTIIR 60
++++++HA +KT + P +SR+LA + P D+ YA +F +I++ +L WNTII+
Sbjct: 27 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIK 86
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ ++ + I+LF +++ P T P + K A+LG+ ++G Q+HG +K G
Sbjct: 87 CYVENQFSHDGIVLFHELV--HEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFG 144
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID-------- 172
D F+ +++ MY+ CG + AR +FD + + DVV WNS+I G A+CGEID
Sbjct: 145 SDVFVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDGYARCGEIDIALQLFEE 203
Query: 173 -----------------------ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
+R+LFD+M RN VSWN+MI+GY+++ F ALELF
Sbjct: 204 MPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELF 263
Query: 210 REMQEQNI-------------------------------KPSEFTMVSLLNACAKLGAIR 238
+M ++ +PS T+VS+L+A + L +
Sbjct: 264 YQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLG 323
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+G WIH+++ N FEL+ I+ T++I+MY KCGC E AL VF + KK + W +++ GL
Sbjct: 324 KGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLG 383
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G N A+ LF + + LKP+ I FI VL ACNH+G V+ + YF +M YKI+P++
Sbjct: 384 IHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTL 443
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C+VD L RAG LEEA+ I +MP P+ +IW SLL R HG I++ + AA+++IE
Sbjct: 444 EHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIE 503
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
+ Y+L+SN+YAAS +E+ R +M + K+PGCS +E G +HEF+ G
Sbjct: 504 VAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDI 563
Query: 479 LHPKAPEVYLLLNDL 493
HP+ E+Y ++++
Sbjct: 564 SHPQTKEIYAKMSEM 578
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/498 (41%), Positives = 308/498 (61%), Gaps = 8/498 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSP-AGDINYAYLVFTQIKKPNLFIWNTII 59
MK LK+ HA ++ GL D A SR+LAFC+ P G + +A+ +F QI+ P + I NT+I
Sbjct: 18 MKQLKEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICICNTMI 77
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ F N I ++ ML + + P T P + KA A L G HG+ VK G
Sbjct: 78 KAFVLKGKLINTIQIYSQML-ENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQSVKLGF 136
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
FD F+ NT+I MY++ G + AR +FDE+ V+W MI G AK G+++ +R LFD
Sbjct: 137 WFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWH-TAVSWTVMISGYAKVGDVETARMLFD 195
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+ ++ W S+ISGYV+N FKE L++FR MQ ++P E +VS+L ACA LGA+
Sbjct: 196 EAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAMEI 255
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G W+H +L L+ + T +IDMY KCG + A ++F+ + ++ CWN+M+ G+AM
Sbjct: 256 GVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMISGMAM 315
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG + A++LFS ++ + +KPD I+FIA+ TAC++SG ++A M Y ++P +
Sbjct: 316 NGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNMEPKSE 375
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMP--SDP--DAIIWGSLLSACRKHGNIEMAKQAAKQ 415
HY C+VD LGRAGLL+EA++LI MP S P AI W +LLSAC HG E+A+ AA++
Sbjct: 376 HYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCSHGQTEVAEDAAQR 435
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+ L+ + S YVL+SNLYAA+ + + R +M+ ++K PGCS ++++G VHEF+A
Sbjct: 436 LFHLE-HHSGAYVLLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGCSSVKINGVVHEFIA 494
Query: 476 GGRLHPKAPEVYLLLNDL 493
G H + EV+ +L +
Sbjct: 495 GEETHLQMEEVHRVLEKM 512
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/485 (40%), Positives = 318/485 (65%), Gaps = 12/485 (2%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCT--SPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+L++IHA +IKT L SR++AFC+ +G ++YA VF++I+ PN FI+ +I+
Sbjct: 21 ELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIK 80
Query: 61 GFSQSSTPRNAILLFIDML----VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
GFS +S P +++L+ ML +S ++ + PS+ KA +L +G Q+HG+V+K
Sbjct: 81 GFSDTSNPVESLILYARMLSCLNYSSGVE---FSIPSVLKACGKLLAFDEGRQVHGQVLK 137
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
L FD F+ N+++ MY + G + AR +FD + DVV+WNSMI G K GEI+ +++
Sbjct: 138 THLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNR-DVVSWNSMIAGYLKAGEIELAKK 196
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+ M ++ V+W SMIS YV+N +AL+LFREM ++P +VS+L+A A LG
Sbjct: 197 VFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGF 256
Query: 237 IRQGEWIHNFLVTNCFELNT-IVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMV 294
+ +G+W+H ++ N EL++ + +A+IDMY KCG E A VF ++ ++ + WNSM+
Sbjct: 257 VEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMI 316
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLA++G EA+ +F ++ +++P+ I+F+ +L+ C+H G V + + YF M E YKI
Sbjct: 317 SGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKI 376
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P I+HY CM+D GRAG LE+A +I++MP + D + W ++LSA KHG+IE+ K AA
Sbjct: 377 VPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAAL 436
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+ IEL ++S YVL+SN+YA + ++++ + RL+M++ ++K GCS + V+G+VHEF+
Sbjct: 437 RAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFL 496
Query: 475 AGGRL 479
G L
Sbjct: 497 LGKEL 501
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/497 (39%), Positives = 308/497 (61%), Gaps = 4/497 (0%)
Query: 7 IHAHLIKTGLAKDP-IAASRILAFCTSPAGDINYAYL-VFTQIKKPNLFIWNTIIRGFSQ 64
+HAH++K G+ + +A+S +L + G + L + +WN +I G +
Sbjct: 41 VHAHVVKFGMELNAHVASSLVLMYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRR 100
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S R + F+DM+ T + P +TY ++ A + G Q+H VV G+ D
Sbjct: 101 SRQFRLSCCSFVDMVRTGVV-PTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLK 159
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N +I MYA C + A +F+ ++ + V+W S+I G + G++D++R LFD M R
Sbjct: 160 VGNALIDMYAECSEMDAAWELFEGMEVR-NTVSWTSVISGFLRLGQVDQARTLFDCMPER 218
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+TVSW +MI GYV+ +F+EALE+FREMQ ++ EFTMVS++ ACA+LGA+ GEW
Sbjct: 219 DTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWAR 278
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ + +++T V A++DMY KCG ++AL VF + + W +++ GLA+NG+
Sbjct: 279 IYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGE 338
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EAI +F + PD ++FI VLTAC H+G V++ +D+F MT +Y I P++ H+ C+
Sbjct: 339 EAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCL 398
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
+D LGRAG L+EA + I +MP P++ IWG+LL+ACR HGN E+ + AA+ ++ELD
Sbjct: 399 IDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENG 458
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
Y+L+SNLYA S ++E+ R ++ E I+KEPGCSLIE++G +HEF+AG R HP +
Sbjct: 459 MVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEFIAGDRSHPMSK 518
Query: 485 EVYLLLNDLGLLIQEMG 501
E+Y L+ + +++ G
Sbjct: 519 EIYSKLDKVLTDLKDAG 535
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 162/370 (43%), Gaps = 68/370 (18%)
Query: 74 LFIDMLVTSPIQPQRLTYPSLFKAY---AQLGLARDGAQLHGRVVKQGLEFDQFIHNTII 130
+++ ML +P T+P L KA A+ G D +H VVK G+E + + ++++
Sbjct: 5 VYVGMLARGA-RPDAYTFPPLLKAVTAAAERGAVGDA--VHAHVVKFGMELNAHVASSLV 61
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
MYA G + AR + D AW A+ G+ V WN
Sbjct: 62 LMYAARGDGAVARTLLD---------AWP------ARGGD--------------TPVVWN 92
Query: 191 SMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN 250
++ISG+ R+ +F+ + F +M + P+ T +++L+AC K I G +H +V +
Sbjct: 93 ALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVAS 152
Query: 251 CFELNTIVVTAIIDMYCKC-------------------------------GCPERALQVF 279
+ V A+IDMY +C G ++A +F
Sbjct: 153 GVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLF 212
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+ +P++ W +M+ G G EA+++F +Q S ++ D + ++V+TAC G +
Sbjct: 213 DCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGAL- 271
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ ++ + + IK + +VD + G +++A + + M D W +++
Sbjct: 272 ETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIR-DKFTWTAVILG 330
Query: 400 CRKHGNIEMA 409
+G+ E A
Sbjct: 331 LAVNGHGEEA 340
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/499 (39%), Positives = 315/499 (63%), Gaps = 35/499 (7%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTS--PAGDINYAYLVFTQIKKPNLFIWNTII 59
+ LK++HA LI GL + R L F ++ +G ++YA+ +F QI +P++F+WNT+I
Sbjct: 27 RSLKQLHAFLIVNGL-NSTTSVLRELIFVSAIVVSGTMDYAHQLFAQISQPDIFMWNTMI 85
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG +Q+ P A+ L+ M ++P + T+ + KA +L + G +HG+V+K G
Sbjct: 86 RGSAQTLKPATAVSLYTQM-ENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGF 144
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFD-----------------------EVDTEF--- 153
+ + F+ NT+IY +ANCG L+ AR +FD +V +
Sbjct: 145 QSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDVARQLFDE 204
Query: 154 ----DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
D+V+WN MI AK GE++++R+LFD++ ++ V+WN+MI+GYV + KEALE+F
Sbjct: 205 MPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMF 264
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC-FELNTIVVTAIIDMYCK 268
M++ +P + TM+S+L+A A LG + G+ IH + C +L+ ++ A+IDMY K
Sbjct: 265 DAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAK 324
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG AL+VF + KK S WNS++ GLA++G+ E+I LF + +KP+ I+F+AV
Sbjct: 325 CGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAV 384
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC+H+GKV + + YF LM +KI+P+IKHY CMVD LGRAGLL EA I +M +P
Sbjct: 385 LVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEP 444
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
+AIIW +LL ACR HG++E+ ++A +Q++++ K+ES YVL+SN+YA+ +++ + R
Sbjct: 445 NAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKVRK 504
Query: 449 LMKEVKIEKEPGCSLIEVD 467
LM + ++K+ G SLI+ D
Sbjct: 505 LMDDGGVKKKVGHSLIDSD 523
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/490 (39%), Positives = 310/490 (63%), Gaps = 6/490 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+ + KTGL D + ++ A + ++F ++ ++ WN +I G+ +
Sbjct: 157 EKLRGLVTKTGLEFDTYVRNSLIDMYAQLA-LTDVMKMLFDEMPDRDVISWNVMISGYVK 215
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+AI +F M S + P T S A L G ++H V+ ++F
Sbjct: 216 CRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIH-HYVRDNVKFTPI 274
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I N ++ MY CG LS AR +F+E+ ++ +V+ W +M+ G A CGE++E+R LF+ R
Sbjct: 275 IGNALLDMYCKCGCLSIARAVFEEMPSK-NVICWTTMVSGYANCGELEEARELFEGSPIR 333
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V W +MI+GYV+ +F EA+ LFREMQ + +KP +F +VSLL CA+ GAI QG+WIH
Sbjct: 334 DVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIH 393
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
F+ N ++ +V TA+I+MY KCG E+AL++F + K + W S++ GLAMNG +
Sbjct: 394 EFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTS 453
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A++LFS ++ + ++PD I+FI VL+AC+H G V + + +F M Y+IKP ++HY C+
Sbjct: 454 KALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCL 513
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAI---IWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
VD LGRAGLL EAE+LI+ +P + AI ++GSLLSACR +GN+EM ++ AKQ+++ +
Sbjct: 514 VDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFES 573
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
++S + L++N+YA + ++E+ + R MK++ ++K PGCS IEVD +HEF +G HP
Sbjct: 574 SDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIHEFFSGHPSHP 633
Query: 482 KAPEVYLLLN 491
+ E+Y +LN
Sbjct: 634 EMREIYYMLN 643
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 215/442 (48%), Gaps = 69/442 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSP-AGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+IHA + + GL +D ++ ++++AFCT P G++NYA +F I+ P L I+N II
Sbjct: 50 MTHLKQIHAQIFRVGLHQDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRYPCLLIYNLII 109
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ F++ + ++LF L + P TYP +FKA LG +L G V K GL
Sbjct: 110 KAFAKKGNYKRTLVLF-SKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGL 168
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
EFD ++ N++I MYA +++FDE+ + DV++WN MI G KC RR
Sbjct: 169 EFDTYVRNSLIDMYAQLALTDVMKMLFDEM-PDRDVISWNVMISGYVKC------RR--- 218
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-IKPSEFTMVSLLNACAKLGAIR 238
F++A+ +F MQE++ + P E T+VS L+AC L +
Sbjct: 219 ----------------------FEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLE 256
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+ IH+++ N + I+ A++DMYCKCGC A VF +P K + CW +MV G A
Sbjct: 257 LGKKIHHYVRDNV-KFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYA 315
Query: 299 --------------------------MNGYE-----NEAIKLFSGLQSSNLKPDYISFIA 327
+NGY +EA+ LF +Q +KPD ++
Sbjct: 316 NCGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVS 375
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
+LT C +G + Q K + E +I + +++ + G +E+A ++ +
Sbjct: 376 LLTGCAQTGAIEQGKWIHEFIDEN-RIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVK 434
Query: 388 PDAIIWGSLLSACRKHGNIEMA 409
D W S++ +G A
Sbjct: 435 -DTASWTSIICGLAMNGKTSKA 455
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 155/347 (44%), Gaps = 34/347 (9%)
Query: 154 DVVAWNSMIIGLAKC-----GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
D+V+ N + +A C G ++ + ++F + + +N +I + + +K L L
Sbjct: 68 DIVSLNKL---MAFCTDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVL 124
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
F +++E + P FT + A LG + + E + + E +T V ++IDMY +
Sbjct: 125 FSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQ 184
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYISFIA 327
+ +F+ +P + + WN M+ G +AI +F +Q S L PD + ++
Sbjct: 185 LALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVS 244
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
L+AC ++ K + + K P I + ++D + G L A + MPS
Sbjct: 245 TLSACTALKRLELGKKIHHYVRDNVKFTPIIGN--ALLDMYCKCGCLSIARAVFEEMPSK 302
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK-NESCGYVLMSNLYAASYQFEEAMEE 446
+ I W +++S G +E A+++ E + + M N Y +F+EA+
Sbjct: 303 -NVICWTTMVSGYANCGELE----EARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVA- 356
Query: 447 RLLMKEVKIEK-EP----------GCS---LIEVDGEVHEFVAGGRL 479
L +E++I K +P GC+ IE +HEF+ R+
Sbjct: 357 --LFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRI 401
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/457 (41%), Positives = 290/457 (63%), Gaps = 2/457 (0%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
++ A VF + WN ++ G+++ + + +LFI+M + P +T +
Sbjct: 158 VDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEM-EKRGVSPNSVTLVLMLS 216
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A ++L G ++ + +E + + N +I M+A CG + EA+ +FD + DV+
Sbjct: 217 ACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNR-DVI 275
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+W S++ G A G+ID +R+ FD++ R+ VSW +MI GY+R +F EAL LFREMQ N
Sbjct: 276 SWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSN 335
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+KP EFTMVS+L ACA LGA+ GEW+ ++ N + +T V A+IDMY KCG +A
Sbjct: 336 VKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAK 395
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
+VF + K W +M+ GLA+NG+ EA+ +FS + +++ PD I++I VL AC H+G
Sbjct: 396 KVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAG 455
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
V + + +F MT + IKP++ HY CMVD LGRAG LEEA ++I +MP P++I+WGSL
Sbjct: 456 MVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSL 515
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
L ACR H N+++A+ AAKQI+EL+ YVL+ N+YAA ++E + R LM E I+
Sbjct: 516 LGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIK 575
Query: 457 KEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
K PGCSL+E++G V+EFVAG + HP++ E+Y L ++
Sbjct: 576 KTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENM 612
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 225/454 (49%), Gaps = 75/454 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTS-PAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+IH+H IK GL+ DP+ R++AFC + +G + YA VF I +P LFIWNT+I
Sbjct: 20 MYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMI 79
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+G+S+ + P+N + +++ ML S I+P R T+P L K + + + G L VK G
Sbjct: 80 KGYSRINHPQNGVSMYLLML-ASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGF 138
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ + F+ I+M++ C + AR +FD D AW
Sbjct: 139 DSNLFVQKAFIHMFSLCRLVDLARKVFDMGD------AWE-------------------- 172
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
V+WN M+SGY R +FK++ LF EM+++ + P+ T+V +L+AC+KL +
Sbjct: 173 ------VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEG 226
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA- 298
G+ I+ ++ E N I+ +IDM+ CG + A VF+ + + + W S+V G A
Sbjct: 227 GKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFAN 286
Query: 299 -------------------------MNGYEN-----EAIKLFSGLQSSNLKPDYISFIAV 328
++GY EA+ LF +Q SN+KPD + +++
Sbjct: 287 IGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSI 346
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS----CMVDALGRAGLLEEAEKLIRSM 384
LTAC H G + + +TY K SIK+ + ++D + G + +A+K+ + M
Sbjct: 347 LTACAHLGALELGE-----WVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM 401
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
D W +++ +G+ E A +IE
Sbjct: 402 -HHKDKFTWTAMIVGLAINGHGEEALAMFSNMIE 434
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 128/278 (46%), Gaps = 6/278 (2%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G++ +R++FD + WN+MI GY R + + ++ M NIKP FT LL
Sbjct: 55 GKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLL 114
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+ A++ G+ + N V + F+ N V A I M+ C + A +VF+ +
Sbjct: 115 KGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVV 174
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN M+ G ++ LF ++ + P+ ++ + +L+AC+ + K + +
Sbjct: 175 TWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYI 234
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
++ ++ + ++D G ++EA+ + +M + D I W S+++ G I++
Sbjct: 235 NGGI-VERNLILENVLIDMFAACGEMDEAQSVFDNM-KNRDVISWTSIVTGFANIGQIDL 292
Query: 409 AKQAAKQIIELDKNESC----GYVLMSNLYAASYQFEE 442
A++ QI E D GY+ M+ A F E
Sbjct: 293 ARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFRE 330
>gi|297738897|emb|CBI28142.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/533 (36%), Positives = 321/533 (60%), Gaps = 66/533 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTII 59
M+ LK+I +++TG + ++ + CT P+ G+++YA +F I P LFI+N +I
Sbjct: 45 MQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVI 104
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ F+++ + R A+LLF L + P TYP +FKA LG R+G +++G VVK GL
Sbjct: 105 KAFTKNGSFRKAVLLF-RQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGL 163
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN-------------------- 159
EFD ++ N+++ MYA G + R +F+E+ + DVV+WN
Sbjct: 164 EFDTYVCNSLMDMYAEVGRVQNLRQVFEEM-PQRDVVSWNVLISGYVKCRRYEDAVDVFR 222
Query: 160 ---------------SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
SM+ G CG++DE+R LF++ R+ V W +MI+GYV+ +F +
Sbjct: 223 QIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDD 282
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
A+ LFREMQ + + P FT+V+LL + +V TA+I+
Sbjct: 283 AVALFREMQIKRVSPDRFTLVALLT-------------------------DAVVGTALIE 317
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
MY KCG E++L++FN + +K + W S++ GLAMNG ++A++LF+ + + +KPD I+
Sbjct: 318 MYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDIT 377
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
FI VL+AC+H G V + + +F MT Y+I+P ++HY C++D LGRAG L+EAE+LI
Sbjct: 378 FIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELIEKS 437
Query: 385 PSDPDAII---WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
P+ + +I +G+LLSACR HGN+EM ++ AK+++ ++ +S + L++N+YA++ ++E
Sbjct: 438 PNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWE 497
Query: 442 EAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLG 494
+ + R MK++ ++K PGCS +EV+G VHEF+ G HP+ E+Y +L+ +
Sbjct: 498 DVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIA 550
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/501 (39%), Positives = 310/501 (61%), Gaps = 7/501 (1%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H+H+IK G D + ++ S G++N A +F + +L +NT+I+G+++
Sbjct: 132 EVHSHIIKHGFESDLFVRNALIHL-YSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEV 190
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK--QGLEFDQ 123
+ P +A+ LF +M S I P T+ +LF + L G Q+H +V K + ++ +
Sbjct: 191 NQPESALCLFGEM-QNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNI 249
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ + I+ MYA CG ++ A +F + T AW+SM+ G A+CGEI+ +R+LF+ M
Sbjct: 250 LLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHE 309
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ +SW +MISGY + + EALELF+EM+ IKP E T+V++L+ACA+LGA G+ +
Sbjct: 310 RDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRL 369
Query: 244 -HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK--KGLSCWNSMVFGLAMN 300
H ++ F NTI+ A++DMY KCG + AL++F V K K +NSM+ GLA +
Sbjct: 370 YHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQH 429
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G AI +F L S+ LKPD ++F+ VL AC HSG + + K F M Y IKP ++H
Sbjct: 430 GLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEH 489
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGR G LEEA L++ MP + +++IW +LLSACR HGN+++ + A ++++E++
Sbjct: 490 YGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEME 549
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
YVL+SN+ A + Q+EEA + R +M++ I K PG S IE+ G +H FVA + H
Sbjct: 550 AQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSH 609
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ E+ L+L D+ + ++ G
Sbjct: 610 PQGKEIELMLKDMAMRLKSAG 630
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/435 (31%), Positives = 224/435 (51%), Gaps = 49/435 (11%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCT--SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+IHA I GL + SR+++F + ++++ L+F+QI PNLF+WNT+IRG+S
Sbjct: 27 QIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYS 86
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+S PR AI+L++ M+ P T+P L + A+L G ++H ++K G E D
Sbjct: 87 RSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDL 146
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ N +I++Y+ G L+ AR +FDE D+V++N+MI G A E+++
Sbjct: 147 FVRNALIHLYSVFGNLNLARTLFDESLVR-DLVSYNTMIKGYA---EVNQP--------- 193
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+ AL LF EMQ I P EFT V+L + C+ L G+ I
Sbjct: 194 -------------------ESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQI 234
Query: 244 HNFLVTN--CFELNTIVVTAIIDMYCKCGCPERALQVFNTV-PKKGLSCWNSMVFGLAMN 300
H + N + N ++ +AI+DMY KCG A +VF+T+ K + W+SMV G A
Sbjct: 235 HAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARC 294
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G N A KLF+ + + D IS+ A+++ + +G+ ++A + F M E IKP
Sbjct: 295 GEINVARKLFNHMH----ERDVISWTAMISGYSQAGQCSEALELFKEM-EALGIKPDEVT 349
Query: 361 YSCMVDALGRAGLLEEAEKL----IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++ A R G + ++L I + + + I+ +++ K G+I+ A + +++
Sbjct: 350 LVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV 409
Query: 417 IELDKNESCGYVLMS 431
KN G+V S
Sbjct: 410 ---GKNMKTGFVFNS 421
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/515 (39%), Positives = 313/515 (60%), Gaps = 48/515 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNTI 58
++ +K++HA ++ G DP +A R L F ++ A G I +AYLVF QI +P+LF++NT+
Sbjct: 21 LRQIKQVHALMVLRGFLSDP-SALRELLFASAVAVRGAIAHAYLVFDQIPRPDLFMYNTL 79
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSP---IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
IRG + ++ PR+A+ L+ M ++P ++T+P + +A +G GAQ+H VV
Sbjct: 80 IRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGGTGAQVHAHVV 139
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G E D F+ N +I M+A+CG L A +FD E D VAW++MI G A+ G+I +R
Sbjct: 140 KAGCESDAFVRNALIGMHASCGELGVASALFDGRARE-DAVAWSAMITGCARRGDIVAAR 198
Query: 176 RLFD-------------------------------KMVSRNTVSWNSMISGYVRNVKFKE 204
+LFD ++ R+ VSWN+MISG+VR
Sbjct: 199 KLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAMISGHVRCGSHVY 258
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN-----FLVTNCFELNTIVV 259
A+ELF +MQ KP TM+SLL+ACA G I G +H+ FL T I+
Sbjct: 259 AMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEMFLRTG---FTVILG 315
Query: 260 TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK 319
A+IDMY KCG + ALQVF + K +S WNS++ GLA++G+ E+I +F + ++
Sbjct: 316 NALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLESIDVFKKMLKEKVR 375
Query: 320 PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
PD I+F+AVL AC+H G V++ ++YF LM Y+I+P++KHY CMVD LGRAGLL+EA +
Sbjct: 376 PDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDMLGRAGLLKEAFE 435
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQ 439
I +M +P+++IW +LL ACR HG IE+A+ A +Q+++ +ES YVL+SN+YA++ +
Sbjct: 436 FIDTMKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDESGDYVLLSNIYASAGE 495
Query: 440 FEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+ E+ + R LM + + K+ G ++ VDG + +
Sbjct: 496 WSESEKMRKLMDDSGVNKQAGRTV--VDGSAKDLM 528
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/474 (39%), Positives = 300/474 (63%), Gaps = 2/474 (0%)
Query: 21 IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLV 80
+ AS + G++ A +F ++K+ +L W+ +I + Q+ A++LF +M
Sbjct: 223 VIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNA 282
Query: 81 TSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLS 140
I + S+ A ++L + G +HG VVK G+E + N +I+MY++C +
Sbjct: 283 NG-IMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVV 341
Query: 141 EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNV 200
A+ +F E D ++WNSMI G KCGEI+++R LFD M ++ VSW++MISGY +
Sbjct: 342 TAQKLFSE-SCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQD 400
Query: 201 KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
+F E L LF+EMQ + KP E +VS+++AC L A+ QG+WIH ++ N ++N I+ T
Sbjct: 401 RFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGT 460
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
+I+MY K GC E AL+VF + +KG+S WN+++ GLAMNG ++++K FS ++ + P
Sbjct: 461 TLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTP 520
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
+ I+F+AVL AC H G V++ +F M + +KI P+IKHY CMVD LGRAG+L+EAE+L
Sbjct: 521 NEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEEL 580
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQF 440
I SMP PD WG+LL AC+K+G+ E ++ ++++EL + VL+SN+YA+ +
Sbjct: 581 IESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNW 640
Query: 441 EEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLG 494
+ +E R +M++ + K PGCS+IE G VHEF+AG + HP+ + +L+++
Sbjct: 641 VDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMA 694
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 239/481 (49%), Gaps = 67/481 (13%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTS-PAGDINYAYLVFTQIKKPNLFIWNTII 59
+K +I + +I +G KD AASR+L F T P +IN +Y +F+ I+ PN FI NT++
Sbjct: 39 IKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMM 98
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+G+ Q ++P AI ++ ML S + TYP LF++ + DG + V+K G
Sbjct: 99 KGYMQRNSPCKAIWVYKFML-ESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGF 157
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D +I NT+I MYA CG LS+AR +FD + D+V+WNSM+ G G ++E++ ++D
Sbjct: 158 DSDVYIQNTLINMYAVCGNLSDARKVFDG-SSVLDMVSWNSMLAGYVLVGNVEEAKDVYD 216
Query: 180 KMVSRNT-------------------------------VSWNSMISGYVRNVKFKEALEL 208
+M RN VSW+++IS Y +N ++EAL L
Sbjct: 217 RMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALIL 276
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV------------------TN 250
F+EM I E ++S+L+AC++L + G+ +H +V ++
Sbjct: 277 FKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSS 336
Query: 251 CFE-------------LNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
C E L+ I ++I Y KCG E+A +F+++P K W++M+ G
Sbjct: 337 CEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGY 396
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A E + LF +Q KPD ++V++AC H ++Q K + +K +
Sbjct: 397 AQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGK-WIHAYIRKNGLKIN 455
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I + +++ + G +E+A ++ + + + W +L+ +G ++ + + ++
Sbjct: 456 IILGTTLINMYMKLGCVEDALEVFKGL-EEKGVSTWNALILGLAMNGLVDKSLKTFSEMK 514
Query: 418 E 418
E
Sbjct: 515 E 515
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/479 (41%), Positives = 302/479 (63%), Gaps = 34/479 (7%)
Query: 22 AASRILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDML 79
+A R L + +S A G + YA+ +F I +P+ F+WNT+IRG +QS +P NAI L+ M
Sbjct: 11 SALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQM- 69
Query: 80 VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFL 139
++P + T+P + KA +L + G +HGRV + G E + F+ NT+IY +ANCG L
Sbjct: 70 ENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDL 129
Query: 140 SEARLMFD---------------------------EVDTEF---DVVAWNSMIIGLAKCG 169
+ AR +FD ++ E D+V+WN MI G AK G
Sbjct: 130 AVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRG 189
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
E++ +R+LFD++ R+ V+WN+MI+GYV ++ALE+F EM+ P E TM+SLL+
Sbjct: 190 EMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLS 249
Query: 230 ACAKLGAIRQGEWIHNFLVTNCF-ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
AC LG + G+ IH + F +L+ ++ A+IDMY KCG RAL+VF + +K +S
Sbjct: 250 ACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVS 309
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WNS++ GLA +G+ ++I LF+ ++ ++PD I+F+ VL AC+H+G+V + + YF LM
Sbjct: 310 TWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLM 369
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
+ Y I+P+I+HY CMVD LGRAGLL EA I +M +P+AI+W +LL ACR HGN+E+
Sbjct: 370 RDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVEL 429
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
++A Q++++ +ES YVL+SN+YA+ +++ + R LM + + KE GCSLIE D
Sbjct: 430 GRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGD 488
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 126/316 (39%), Gaps = 50/316 (15%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + + G + + ++ F + GD+ A +F K ++ W+ + G+++
Sbjct: 100 VHGRVFRLGFESNTFVRNTLIYF-HANCGDLAVARALFDGSAKRDVVAWSALTAGYARRG 158
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A LF +M V + ++ + YA+ G +L V K+ D
Sbjct: 159 ELGVARQLFDEMPVKDLV-----SWNVMITGYAKRGEMESARKLFDEVPKR----DVVTW 209
Query: 127 NTIIYMYANCGFLSEARLMFDEVDT----------------------------------- 151
N +I Y CG +A MF+E+ +
Sbjct: 210 NAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISE 269
Query: 152 ----EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
+ V+ N++I AKCG I + +F M ++ +WNS++ G + ++++
Sbjct: 270 MGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIH 329
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC-FELNTIVVTAIIDMY 266
LF EM++ I+P E T V +L AC+ G + +G + + E N ++D+
Sbjct: 330 LFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLL 389
Query: 267 CKCGCPERALQVFNTV 282
+ G A +T+
Sbjct: 390 GRAGLLNEAFDFIDTM 405
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/503 (37%), Positives = 310/503 (61%), Gaps = 13/503 (2%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTIIR 60
++++++HA +KT + P +SR+LA + P D+ YA +F +I++ +L WNTII+
Sbjct: 30 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIK 89
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ ++ + I+LF +++ P T P + K A+LG+ ++G Q+HG +K G
Sbjct: 90 CYVENQFSHDGIVLFHELV--HEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFG 147
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDE-VDTEF---------DVVAWNSMIIGLAKCGE 170
D F+ +++ MY+ CG + AR +FD +D + ++V+WN+MI G K G+
Sbjct: 148 SDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGD 207
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
D + LF +M + V+WN MI+GY N +F +A+++F M + +PS T+VS+L+A
Sbjct: 208 FDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSA 267
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
+ L + +G WIH+++ N FEL+ I+ T++I+MY KCGC E AL VF + KK + W
Sbjct: 268 VSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHW 327
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
+++ GL ++G N A+ LF + + LKP+ I FI VL ACNH+G V+ + YF +M
Sbjct: 328 TAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMN 387
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
YKI+P+++HY C+VD L RAG LEEA+ I +MP P+ +IW SLL R HG I++ +
Sbjct: 388 EYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGE 447
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
AA+++IE+ Y+L+SN+YAAS +E+ R +M + K+PGCS +E G +
Sbjct: 448 YAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTL 507
Query: 471 HEFVAGGRLHPKAPEVYLLLNDL 493
HEF+ G HP+ E+Y ++++
Sbjct: 508 HEFIVGDISHPQTKEIYAKMSEM 530
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/496 (41%), Positives = 302/496 (60%), Gaps = 9/496 (1%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSP-AGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+ HA + TGL + A SR+LAFC+ P G + YA VF +I P L I NTII+ F
Sbjct: 21 LKQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGSLTYACRVFERIHHPTLCICNTIIKTF 80
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ +F ML + + P T P + KA A L G +HG K GL FD
Sbjct: 81 LVNGNFYGTFHVFTKML-HNGLGPDNYTIPYVLKACAALRDCSLGKMVHGYSSKLGLVFD 139
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ N+++ MY+ CG + AR +FDE+ V+W+ MI G AK G++D +R FD+
Sbjct: 140 IFVGNSLMAMYSVCGDVIAARHVFDEM-PRLSAVSWSVMISGYAKVGDVDSARLFFDEAP 198
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
++ W +MISGYV+N FKE L LFR +Q ++ P E VS+L+ACA LGA+ G W
Sbjct: 199 EKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSACAHLGALDIGIW 258
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH +L L+ + T+++DMY KCG E A ++F+++P++ + CWN+M+ GLAM+G
Sbjct: 259 IHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWNAMISGLAMHGD 318
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
A+K+FS ++ + +KPD I+FIAV TAC++SG ++ M+ Y+I+P +HY
Sbjct: 319 GASALKMFSEMEKTGIKPDDITFIAVFTACSYSGMAHEGLQLLDKMSSLYEIEPKSEHYG 378
Query: 363 CMVDALGRAGLLEEAEKLIRSMPS-----DPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
C+VD L RAGL EA +IR + S + + W + LSAC HG ++A++AAK+++
Sbjct: 379 CLVDLLSRAGLFGEAMVMIRRITSTSWNGSEETLAWRAFLSACCNHGQAQLAERAAKRLL 438
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
L+ N S YVL+SNLYAAS + +A R +M+ ++K PGCS +E+DG V EF+AG
Sbjct: 439 RLE-NHSGVYVLLSNLYAASGKHSDARRVRNMMRNKGVDKAPGCSSVEIDGVVSEFIAGE 497
Query: 478 RLHPKAPEVYLLLNDL 493
HP+ E++ +L L
Sbjct: 498 ETHPQMEEIHSVLEIL 513
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/495 (37%), Positives = 311/495 (62%), Gaps = 3/495 (0%)
Query: 9 AHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTP 68
H+ K G + D + + F S G + +A +F + ++ WNT+I G+ +S P
Sbjct: 145 GHVQKLGFSADVFVVNAAMHF-WSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLP 203
Query: 69 RNAILLFIDMLVT-SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
R A+ LF + + ++P +T AQ+G G +LH V +G+ + N
Sbjct: 204 REALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMN 263
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
++ MY CG L A +F+ + V+W +MI+G A+ G ++++R LFD+M R+
Sbjct: 264 AVMDMYVKCGSLELANSVFERISNR-TAVSWTTMIVGHARLGMMEDARMLFDEMPERDVF 322
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
WN++++GYV+N + KEA+ LF EMQ+ + P+E TMV+LL+AC++LGA+ G W+H+++
Sbjct: 323 PWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYI 382
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
+ L+ + T+++DMY KCG ++A+ VFN +P + W SM+ GLA +G+ +EAI
Sbjct: 383 DRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAI 442
Query: 308 KLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
+ F + L+PD I+FI VL+AC H+G V + +F+LM Y ++ +KHYSCM+D
Sbjct: 443 EYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDL 502
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGY 427
LGRAG L+EAE+L+ +MP DPDA++WG+L ACR HGNI + ++AA +++ELD ++S Y
Sbjct: 503 LGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIY 562
Query: 428 VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
VL++N+YA + ++A + R++M+ + +EK PGCS IE++G VHEF+ + H +Y
Sbjct: 563 VLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHLDTNAIY 622
Query: 488 LLLNDLGLLIQEMGS 502
L+++ L ++ + +
Sbjct: 623 DCLHEITLQMRHIAN 637
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/500 (39%), Positives = 311/500 (62%), Gaps = 11/500 (2%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAF--CTS------PAGDINYAYLVFTQIKKPNLFI 54
DLK IH L++T L D ASR+LA C P + YAY +F+QI+ PNLF+
Sbjct: 27 DLKIIHGFLLRTHLISDVFVASRLLALALCVDDSTFHKPTNLLGYAYGIFSQIQNPNLFV 86
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
+N +IR FS + P A + ML S I P +T+P L KA ++ G Q H ++
Sbjct: 87 FNVLIRCFSTGAEPSKAFGFYTQML-KSRIWPDNITFPFLIKASTEMECVVVGEQTHSQI 145
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
V+ G + D ++ N++++MYANCG ++ A +F ++ DVV+W SM+ G KCG ++++
Sbjct: 146 VRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFR-DVVSWTSMVAGYCKCGMVEDA 204
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R +FD+M RN +W+ MI+GY +N F++A++LF M+ + + +E MVS++++CA L
Sbjct: 205 REMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHL 264
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA+ GE H ++V + +N I+ TA++DMY +CG E+A++VF +P K W+S++
Sbjct: 265 GALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSII 324
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLA++G+ ++AI FS + P I+ AVL+AC+H G V++ + + M Y I
Sbjct: 325 KGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGI 384
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+P ++HY C+VD LGRAG L EAE I MP P+A I G+LL AC+ + N E+A++
Sbjct: 385 EPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILGALLGACKIYKNTEVAERVGN 444
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+IE+ S YVL+SN+YA + Q+E+ R +MKE ++K PG SLIE+DG++++F
Sbjct: 445 MLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKLVKKPPGWSLIEIDGKINKFS 504
Query: 475 AG-GRLHPKAPEVYLLLNDL 493
G + HP+ ++ L ++
Sbjct: 505 MGDDQKHPEMGKIKRLWEEI 524
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/488 (39%), Positives = 304/488 (62%), Gaps = 7/488 (1%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVF--TQIKKPNLFIWNTII 59
+L+++HA +IKT + +R+ C +P+ +YA +F + +KP F+WN+ +
Sbjct: 43 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPS--FHYAQQIFECVEKQKPETFVWNSCL 100
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ ++ +P +AI+LF L + P T S+ +A L +G LHG V K G
Sbjct: 101 KALAEGDSPIDAIMLFYR-LRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGF 159
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ ++ N I+++YA+CG + EARL+F+++ + DVV WN MI L K G+ + + LF
Sbjct: 160 RSNLYLQNMIVHLYASCGEMGEARLLFEKM-PQRDVVTWNIMIAQLIKQGDHEGAYDLFS 218
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M RN SW SMI+GYV+ K KEA+ LF +M+E +K +E T+V++L ACA LGA+
Sbjct: 219 RMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDL 278
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G IH + + F+ N + +IDMY KCGC E A +VF + ++ + W++M+ GLAM
Sbjct: 279 GMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAM 338
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G EA++LFS + ++P+ ++FI +L AC+H G +++ + +F MT Y I P I+
Sbjct: 339 HGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIE 398
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD L RAGLL EA + I +MP P+ ++WG+LL ACR H N+EMA++A K ++EL
Sbjct: 399 HYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLEL 458
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D YV++SN+YA + ++E+ R MK+ +++K PG S I VDG VHEFVAG
Sbjct: 459 DPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEES 518
Query: 480 HPKAPEVY 487
HP +++
Sbjct: 519 HPDTEQIF 526
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/459 (39%), Positives = 289/459 (62%), Gaps = 2/459 (0%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
+F ++ + ++ W+ +I F Q+ AI F+ M + + S A A L
Sbjct: 332 LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIG-VMVDEVVAVSALSACANLL 390
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ G +H +K G E + N +IYMY+ CG + AR +FDE D+++WNSMI
Sbjct: 391 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYL-LDLISWNSMI 449
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G KC +D ++ +FD M ++ VSW+SMISGY +N F E L LF+EMQ KP E
Sbjct: 450 SGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDET 509
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T+VS+++ACA+L A+ QG+W+H ++ N +N I+ T +IDMY KCGC E AL+VF +
Sbjct: 510 TLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM 569
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
+KG+S WN+++ GLAMNG ++ +FS ++ ++ P+ I+F+ VL AC H G V++ +
Sbjct: 570 IEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQ 629
Query: 343 DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
+F M +KI+P++KHY CMVD LGRAG L+EAE+L+ MP PD WG+LL AC+K
Sbjct: 630 HHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKK 689
Query: 403 HGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS 462
HG+ EM ++ +++IEL + +VL+SN+YA+ ++++ +E R +M + ++ K PGCS
Sbjct: 690 HGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCS 749
Query: 463 LIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+IE +G +HEF+AG + HP + +L ++ + ++ G
Sbjct: 750 MIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEG 788
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 210/483 (43%), Gaps = 99/483 (20%)
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R + Q+++P A L+ ML ++ + TYP L +A + + Q+H V+K G
Sbjct: 186 RAYIQTNSPHFAFTLYKSML-SNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGF 244
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR---- 175
+ D ++ NT+I ++ C +++A +F+E + D V+WNS++ G + G ++E++
Sbjct: 245 DSDVYVRNTLINCFSVCSNMTDACRVFNE-SSVLDSVSWNSILAGYIEIGNVEEAKHIYH 303
Query: 176 ---------------------------RLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
+LFD+M+ ++ V+W+++I+ + +N ++EA+
Sbjct: 304 QMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRT 363
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
F M + + E VS L+ACA L + G+ IH+ + E + A+I MY K
Sbjct: 364 FVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSK 423
Query: 269 CG-------------------------------CPERALQVFNTVPKKGLSCWNSMVFGL 297
CG + A +F+++P+K + W+SM+ G
Sbjct: 424 CGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGY 483
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK---DYF--------- 345
A N +E + LF +Q S KPD + ++V++AC + Q K Y
Sbjct: 484 AQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINV 543
Query: 346 ---TLMTETY---------------KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS- 386
T + + Y I+ I ++ ++ L GL+E + + +M
Sbjct: 544 ILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKC 603
Query: 387 --DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC--GYVLMSNLYAASYQFEE 442
P+ I + +L ACR G ++ + +I K + Y M +L + + +E
Sbjct: 604 HVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQE 663
Query: 443 AME 445
A E
Sbjct: 664 AEE 666
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/495 (38%), Positives = 309/495 (62%), Gaps = 9/495 (1%)
Query: 9 AHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTP 68
AH+++ GL D + F S G + A +F + +L WNT+I G+ + P
Sbjct: 149 AHVLRLGLDSDVFVVNAATHF-LSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNP 207
Query: 69 RNAILLFIDMLVTSPI-QPQRLTYPSLFKAYAQLGLARD---GAQLHGRVVKQGLEFDQF 124
A+ LF M+ + +P +T + A + G RD G +LHG V G+
Sbjct: 208 AEALELFWRMVAEDAVVRPDEVT---MIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVR 264
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MY CG L A+ +F+ ++ VV+W +MI+G AK G +D++R++FD+M R
Sbjct: 265 LMNALMDMYIKCGSLEMAKSVFERIEHR-TVVSWTTMIVGFAKFGLMDDARKVFDEMPER 323
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ WN++++GYV+ + KEAL LF EMQE ++ P E TMV+LL AC++LGA+ G W+H
Sbjct: 324 DVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVH 383
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ + + + T++IDMY KCG E+A+ +F +P+K W +M+ GLA +G+ N
Sbjct: 384 RYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHAN 443
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EAI+ F + KPD I+FI VL+AC H+G V + +++F+LM Y ++ +KHYSCM
Sbjct: 444 EAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCM 503
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
+D LGRAG L+EAE+L+ +MP +PDA++WG++ ACR GNI + ++AA +++E+D ++S
Sbjct: 504 IDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDS 563
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL++N+YA + ++A + R +M+ + +EK PGCS IE++G VHEF+ + H +
Sbjct: 564 GIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHMDSH 623
Query: 485 EVYLLLNDLGLLIQE 499
+Y L+++ L I+
Sbjct: 624 AIYDCLHEITLQIKH 638
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 200/466 (42%), Gaps = 84/466 (18%)
Query: 6 KIHAHLIKTGLAKD----------PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIW 55
+IHAHL+ GL +D + TSP + +A + + + +
Sbjct: 28 QIHAHLLAAGLLQDFSSLLAAAYALSTTATATDARTSPPSPLRHALALLSSLPASA---Y 84
Query: 56 NTIIRGFSQS--------STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG 107
N IR S S R + L+ +L + +P LT+P L KA A+L G
Sbjct: 85 NAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYG 144
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
V++ GL+ D F+ N + + G + +AR +FD D+V+WN++I G +
Sbjct: 145 DAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVR-DLVSWNTLIGGYVR 203
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
G E+ LF +MV+ + V ++P E TM++
Sbjct: 204 RGNPAEALELFWRMVAEDAV-----------------------------VRPDEVTMIAA 234
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
++ C ++ + G +H F+ ++ ++ A++DMY KCG E A VF + + +
Sbjct: 235 VSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTV 294
Query: 288 SCWNSMVFGLA--------------------------MNGYEN-----EAIKLFSGLQSS 316
W +M+ G A M GY EA+ LF +Q +
Sbjct: 295 VSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEA 354
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE 376
++ PD I+ + +LTAC+ G + + E +++ S+ + ++D + G +E+
Sbjct: 355 SVVPDEITMVNLLTACSQLGALEMGM-WVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEK 413
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
A + + +P + +A+ W +++ HG+ A + + +IEL +
Sbjct: 414 AIHIFKEIP-EKNALTWTAMICGLANHGHANEAIEHFRTMIELGQK 458
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/488 (39%), Positives = 304/488 (62%), Gaps = 7/488 (1%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQI--KKPNLFIWNTII 59
+L+++HA +IKT + +R+ C +P+ +YA +F + +KP F+WN+ +
Sbjct: 43 ELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPS--FHYAQQIFKCVEKQKPETFVWNSCL 100
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ ++ +P +AI+LF L + P T S+ +A L +G LHG V K G
Sbjct: 101 KALAEGDSPIDAIMLFYR-LRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGF 159
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ ++ N I+++YA+CG + EARL+F+++ + DVV WN MI L K G+ + + LF
Sbjct: 160 RSNLYLQNMIVHLYASCGEMGEARLLFEKM-PQRDVVTWNIMIAQLIKQGDHEGAYDLFS 218
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M RN SW SMI+GYV+ K KEA+ LF +M+E +K +E T+V++L ACA LGA+
Sbjct: 219 RMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDL 278
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G IH + + F+ N + +IDMY KCGC E A +VF + ++ + W++M+ GLAM
Sbjct: 279 GMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAM 338
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G EA++LFS + ++P+ ++FI +L AC+H G +++ + +F MT Y I P I+
Sbjct: 339 HGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIE 398
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD L RAGLL EA + I +MP P+ ++WG+LL ACR H N+EMA++A K ++EL
Sbjct: 399 HYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLEL 458
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D YV++SN+YA + ++E+ R MK+ +++K PG S I VDG VHEFVAG
Sbjct: 459 DPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEES 518
Query: 480 HPKAPEVY 487
HP +++
Sbjct: 519 HPDTEQIF 526
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/459 (39%), Positives = 291/459 (63%), Gaps = 2/459 (0%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
+F ++ + ++ W+ +I F Q+ AI F+ M + + + +L A A L
Sbjct: 197 LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSAL-SACANLL 255
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ G +H +K G E + N +IYMY+ CG + AR +FDE D+++WNSMI
Sbjct: 256 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYL-LDLISWNSMI 314
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G KC +D ++ +FD M ++ VSW+SMISGY +N F E L LF+EMQ KP E
Sbjct: 315 SGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDET 374
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T+VS+++ACA+L A+ QG+W+H ++ N +N I+ T +IDMY KCGC E AL+VF +
Sbjct: 375 TLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGM 434
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
+KG+S WN+++ GLAMNG ++ +FS ++ ++ P+ I+F+ VL AC H G V++ +
Sbjct: 435 IEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQ 494
Query: 343 DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
+F M +KI+P++KHY CMVD LGRAG L+EAE+L+ MP PD WG+LL AC+K
Sbjct: 495 HHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKK 554
Query: 403 HGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS 462
HG+ EM ++ +++IEL + +VL+SN+YA+ ++++ +E R +M + ++ K PGCS
Sbjct: 555 HGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCS 614
Query: 463 LIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+IE +G +HEF+AG + HP + +L ++ + ++ G
Sbjct: 615 MIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEG 653
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/533 (24%), Positives = 239/533 (44%), Gaps = 100/533 (18%)
Query: 11 LIKTGLAKDPIAASRILAFCTS-PAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPR 69
++ TG ++ AASR++ F T P I+Y +F I+ N F+WN +IR + Q+++P
Sbjct: 1 MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPH 60
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
A L+ ML ++ + TYP L +A + + Q+H V+K G + D ++ NT+
Sbjct: 61 FAFTLYKSML-SNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTL 119
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR-------------- 175
I ++ C +++A +F+E + D V+WNS++ G + G ++E++
Sbjct: 120 INCFSVCSNMTDACRVFNE-SSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIAS 178
Query: 176 -----------------RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
+LFD+M+ ++ V+W+++I+ + +N ++EA+ F M + +
Sbjct: 179 NSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVM 238
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG-------- 270
E VS L+ACA L + G+ IH+ + E + A+I MY KCG
Sbjct: 239 VDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKL 298
Query: 271 -----------------------CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
+ A +F+++P+K + W+SM+ G A N +E +
Sbjct: 299 FDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETL 358
Query: 308 KLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK---DYF------------TLMTETY 352
LF +Q S KPD + ++V++AC + Q K Y T + + Y
Sbjct: 359 ALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMY 418
Query: 353 ---------------KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS---DPDAIIWG 394
I+ I ++ ++ L GL+E + + +M P+ I +
Sbjct: 419 MKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFM 478
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESC--GYVLMSNLYAASYQFEEAME 445
+L ACR G ++ + +I K + Y M +L + + +EA E
Sbjct: 479 GVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEE 531
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/561 (38%), Positives = 318/561 (56%), Gaps = 69/561 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+IHA +++TGL DP AS+I+AFC+ +G + YA LVF+QI P + N+II
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA-------------YAQLGLARD 106
RG + + + A+L + +M+V I P R T+PSLFK+ +LG A D
Sbjct: 61 RGCTDKNLHQEALLFYQEMMVQGLI-PDRYTFPSLFKSCRNSSEGKQIHCHSTKLGFASD 119
Query: 107 --------------GAQLHGRVVKQGLEFDQFIH-NTIIYMYANCGFLSEARLMFDEVDT 151
G + R V +E + T+I ++A +EA +FD +
Sbjct: 120 TYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMK 179
Query: 152 EFDV--------------------------------------VAWNSMIIGL-AKCGEID 172
+V V N++++ + KCG +
Sbjct: 180 SENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQ 239
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
+R LFDK +N SWN MI+G+V + ++EAL LFREMQ + IK + TM SLL AC
Sbjct: 240 LARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACT 299
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
LGA+ G+W+H ++ +++ + TA++DMY KCG E A+QVF+ +P+K + W +
Sbjct: 300 HLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTA 359
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
++ GLAM G A++ F + +KPD I+F+ VL AC+H+G V++ +F M++TY
Sbjct: 360 LILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTY 419
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
I+P+I+HY +VD LGRAG + EAE+LI+SMP PD + G LL ACR HGN+E A++A
Sbjct: 420 GIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERA 479
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
AKQ++E+D S YVL+SN+Y +S ++EEA R LM E + K PGCS IEV G VHE
Sbjct: 480 AKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHE 539
Query: 473 FVAGGRLHPKAPEVYLLLNDL 493
FV G H ++ E+ +L D+
Sbjct: 540 FVKGDSSHRQSSEINEMLEDM 560
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/519 (36%), Positives = 314/519 (60%), Gaps = 35/519 (6%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
++A ++KT +D ++ ++ S ++YA L +TQ++ PN+F++N +I+GF QS
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFIS-ALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSY 59
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
P A+ L++ ML + + P T+PSL KA + R +HG V + G + F+
Sbjct: 60 QPVQALELYVQMLRAN-VSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQ 118
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+++ Y++ G + E+ +FDE+ E DV AW +M+ GL + G++ + RLFD M RN
Sbjct: 119 TSLVDFYSSMGRIEESVRVFDEMP-ERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNL 177
Query: 187 VSWNSMISGYVR-------------------------------NVKFKEALELFREMQEQ 215
+WN++I GY R N +F+EAL +F EM +
Sbjct: 178 ATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKH 237
Query: 216 NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
I P E TM ++++ACA LGA+ G+ IH +++ + F L+ + +A+IDMY KCG +R+
Sbjct: 238 GISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRS 297
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
L +F + +K L CWNS++ GLA++GY EA+ +F ++ +KP+ ++F++VL+ACNH+
Sbjct: 298 LLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHA 357
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
G + + + F MT + I P ++HY CMVD L +AGLLEEA +LIR+M +P+A+IWG+
Sbjct: 358 GLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGA 417
Query: 396 LLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
LLS C+ H N+E+A+ AA +++ L+ S Y L+ N+ A ++ EA + RL MKE +
Sbjct: 418 LLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGV 477
Query: 456 EKE-PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
EK PG S IE++ +VH+F A + H + E+Y LL +L
Sbjct: 478 EKRCPGSSWIEMESQVHQFAASDKSHAASDEIYSLLAEL 516
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/528 (37%), Positives = 317/528 (60%), Gaps = 32/528 (6%)
Query: 6 KIHAHLIKTGLAKDPIAASRILA--FCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+IHA +IKT L + +++L F S A D+ YA VF +I P+ FIWNT+IR +
Sbjct: 21 QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
S P+ ++ LF M I + + +A +L +G +LH +V+K GL D
Sbjct: 81 NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDL 140
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVD------------------------------TEF 153
F+ +I MYA G + AR + DE+ E
Sbjct: 141 FVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPER 200
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
D+V+WN+MI G A G++ +++LFD+ R+ +SW+SMI+ Y + + EAL LF EMQ
Sbjct: 201 DLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQ 260
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
N+ P + TMVS+L+AC +GA+ G+ IH + N E++ + T+++DMY KCG +
Sbjct: 261 LANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDID 320
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+L+VFN + + + W++M+ GLA +G+ A+ FS + S ++KP+ ++FI VL+AC+
Sbjct: 321 NSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACS 380
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
H G V++ YFT M++ Y + P I+HY C+VD LGRAG L+EA +LI+SMP PDAI+W
Sbjct: 381 HIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVW 440
Query: 394 GSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEV 453
+LL ACR + N+E+A++A ++EL+ + YVL+SN+Y+ + ++++ + R +MK +
Sbjct: 441 RALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNI 500
Query: 454 KIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
I+K PG S IEVD VHEFVAG + HP++ ++ +L+++ ++ G
Sbjct: 501 NIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANG 548
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/450 (41%), Positives = 289/450 (64%), Gaps = 11/450 (2%)
Query: 53 FIWNTIIRGF----SQSSTPRNA-ILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG 107
F+WNT+IR +Q + P ++ I +F+ M +QP T+P L +++A L G
Sbjct: 25 FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHG-VQPDFHTFPFLLQSFASPSLLHLG 83
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
+H ++++ GL D F+ ++I MY++CG L AR +FDE+ D+ +WNS+I +
Sbjct: 84 RSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQP-DLPSWNSIINANFQ 142
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE---QNIKPSEFTM 224
G +D +R LF M RN +SW+ MI+GYVR ++KEAL LFREMQ +++P+EFTM
Sbjct: 143 AGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTM 202
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF-NTVP 283
+L AC +LGA+ G+W H ++ ++ ++ TA+IDMY KCG E+A VF N P
Sbjct: 203 SGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGP 262
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
K + W++M+ GLAM+G E + LFS + + ++P+ ++F+AV AC H G V++ KD
Sbjct: 263 NKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKD 322
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
Y MTE Y I P+I+HY CMVD GRAG ++EA +++SMP +PD ++WG+LLS R H
Sbjct: 323 YLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMH 382
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
G+IE + A K++IEL+ S YVL+SN+YA ++E+ R LM+ + I+K PGCSL
Sbjct: 383 GDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSL 442
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
IEV G +HEF G HP+ +++++L ++
Sbjct: 443 IEVGGVLHEFFVGDDSHPETRQIHMMLEEI 472
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 143/332 (43%), Gaps = 67/332 (20%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTI------ 58
+ +HA +++ GLA DP + +++ +S G++ +A VF +I +P+L WN+I
Sbjct: 84 RSVHAQILRFGLAIDPFVQTSLISMYSS-CGNLGFARQVFDEIPQPDLPSWNSIINANFQ 142
Query: 59 -------------------------IRGFSQSSTPRNAILLF--IDMLVTSPIQPQRLTY 91
I G+ + + A+ LF + ML + ++P T
Sbjct: 143 AGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTM 202
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
+ A +LG G H + K G+ D + +I MYA CG + +A +F +
Sbjct: 203 SGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGP 262
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
DV+AW++MI GLA G +E LF KM++
Sbjct: 263 NKDVMAWSAMISGLAMHGLAEECVGLFSKMIN---------------------------- 294
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV-VTAIIDMYCKCG 270
Q ++P+ T +++ AC G + +G+ + + + TI ++D+Y + G
Sbjct: 295 ---QGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAG 351
Query: 271 CPERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
+ A V ++P + + W +++ G M+G
Sbjct: 352 RIKEAWNVVKSMPMEPDVLVWGALLSGSRMHG 383
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 308/490 (62%), Gaps = 6/490 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+ ++KTG+ D + ++ ++ A +F ++ + WN +I G+ +
Sbjct: 217 EKVRGFIVKTGMDLDNYVYNSLIDM-YYELSNVENAKKLFDEMTTRDSVSWNVMISGYVR 275
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+AI F +M +P T S A L G ++H V K+ L F
Sbjct: 276 CRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTR 334
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I N ++ MYA CG L+ AR +FDE+ + +V+ W SMI G CG++ E+R LFDK R
Sbjct: 335 IDNALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISGYINCGDLREARDLFDKSPVR 393
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V W +MI+GYV+ F +A+ LFREMQ Q IKP +FT+V+LL CA+LGA+ QG+WIH
Sbjct: 394 DVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIH 453
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+L N ++ +V TA+I+MY KCGC +++L++F + K + W S++ GLAMNG +
Sbjct: 454 GYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTS 513
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA++LFS ++ KPD I+FI VL+AC+H G V + + +F M + ++I+P ++HY C+
Sbjct: 514 EALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCV 573
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAII---WGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+D LGRAGLL+EAE+LI+ +P + I+ +G+LLSACR H N++M ++ AK++ ++
Sbjct: 574 IDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIES 633
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+S + L++N+YA+ ++E+A + R MKE+ ++K PGCSLIEVDG VHEF+ G HP
Sbjct: 634 CDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHP 693
Query: 482 KAPEVYLLLN 491
+ E+ +LN
Sbjct: 694 EMIEICSMLN 703
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 210/442 (47%), Gaps = 69/442 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+I + + + GL D ++++AFC S G++ YA +F ++ P+LF++N ++
Sbjct: 110 MDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMV 169
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ +++ R +LLF L + P TYP + KA L R G ++ G +VK G+
Sbjct: 170 KIYAKRGILRKVLLLF-QQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGM 228
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D +++N++I MY + A+ +FDE+ T D V+WN MI
Sbjct: 229 DLDNYVYNSLIDMYYELSNVENAKKLFDEMTTR-DSVSWNVMI----------------- 270
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIR 238
SGYVR +F++A+ FREMQ++ N KP E T+VS L+AC L +
Sbjct: 271 --------------SGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLE 316
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL- 297
G+ IHN+ V T + A++DMY KCGC A +F+ + K + CW SM+ G
Sbjct: 317 LGDEIHNY-VRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYI 375
Query: 298 -------------------------AMNGYE-----NEAIKLFSGLQSSNLKPDYISFIA 327
+NGY ++A+ LF +Q +KPD + +
Sbjct: 376 NCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVT 435
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
+LT C G + Q K + E +I + + +++ + G ++++ ++ + D
Sbjct: 436 LLTGCAQLGALEQGKWIHGYLDEN-RITMDVVVGTALIEMYSKCGCVDKSLEIFYEL-ED 493
Query: 388 PDAIIWGSLLSACRKHGNIEMA 409
D W S++ +G A
Sbjct: 494 KDTASWTSIICGLAMNGKTSEA 515
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 10/290 (3%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G + + ++F+ + + +N M+ Y + ++ L LF++++E + P FT +L
Sbjct: 145 GNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 204
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
A L +RQGE + F+V +L+ V ++IDMY + E A ++F+ + +
Sbjct: 205 KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 264
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
WN M+ G +AI F +Q N KPD + ++ L+AC + +
Sbjct: 265 SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 324
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ + I + ++D + G L A + M S + I W S++S G++
Sbjct: 325 VRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEM-SMKNVICWTSMISGYINCGDLR 381
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK 457
A+ DK+ VL + + QF + L +E++I+K
Sbjct: 382 EARDL------FDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQK 425
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/490 (39%), Positives = 308/490 (62%), Gaps = 6/490 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+ ++KTG+ D + ++ ++ A +F ++ + WN +I G+ +
Sbjct: 263 EKVRGFIVKTGMDLDNYVYNSLIDM-YYELSNVENAKKLFDEMTTRDSVSWNVMISGYVR 321
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+AI F +M +P T S A L G ++H V K+ L F
Sbjct: 322 CRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTR 380
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I N ++ MYA CG L+ AR +FDE+ + +V+ W SMI G CG++ E+R LFDK R
Sbjct: 381 IDNALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISGYINCGDLREARDLFDKSPVR 439
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V W +MI+GYV+ F +A+ LFREMQ Q +KP +FT+V+LL CA+LGA+ QG+WIH
Sbjct: 440 DVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIH 499
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+L N ++ +V TA+I+MY KCGC +++L++F + K + W S++ GLAMNG +
Sbjct: 500 GYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTS 559
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA++LFS ++ KPD I+FI VL+AC+H G V + + +F M + ++I+P ++HY C+
Sbjct: 560 EALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCV 619
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAII---WGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+D LGRAGLL+EAE+LI+ +P + I+ +G+LLSACR H N++M ++ AK++ ++
Sbjct: 620 IDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIES 679
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+S + L++N+YA+ ++E+A + R MKE+ ++K PGCSLIEVDG VHEF+ G HP
Sbjct: 680 CDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHP 739
Query: 482 KAPEVYLLLN 491
+ E+ +LN
Sbjct: 740 EMMEICSMLN 749
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 210/442 (47%), Gaps = 69/442 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+I + + + GL D ++++AFC S G++ YA +F ++ P+LF++N ++
Sbjct: 156 MDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMV 215
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ +++ R +LLF L + P TYP + KA L R G ++ G +VK G+
Sbjct: 216 KMYAKRGILRKVLLLF-QQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGM 274
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D +++N++I MY + A+ +FDE+ T D V+WN MI
Sbjct: 275 DLDNYVYNSLIDMYYELSNVENAKKLFDEMTTR-DSVSWNVMI----------------- 316
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIR 238
SGYVR +F++A+ FREMQ++ N KP E T+VS L+AC L +
Sbjct: 317 --------------SGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLE 362
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL- 297
G+ IHN+ V T + A++DMY KCGC A +F+ + K + CW SM+ G
Sbjct: 363 LGDEIHNY-VRKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYI 421
Query: 298 -------------------------AMNGYE-----NEAIKLFSGLQSSNLKPDYISFIA 327
+NGY ++A+ LF +Q +KPD + +
Sbjct: 422 NCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVT 481
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
+LT C G + Q K + E +I + + +++ + G ++++ ++ + D
Sbjct: 482 LLTGCAQLGALEQGKWIHGYLDEN-RITMDVVVGTALIEMYSKCGCVDKSLEIFYEL-ED 539
Query: 388 PDAIIWGSLLSACRKHGNIEMA 409
D W S++ +G A
Sbjct: 540 KDTASWTSIICGLAMNGKTSEA 561
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 129/290 (44%), Gaps = 10/290 (3%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G + + ++F+ + + +N M+ Y + ++ L LF++++E + P FT +L
Sbjct: 191 GNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVL 250
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
A L +RQGE + F+V +L+ V ++IDMY + E A ++F+ + +
Sbjct: 251 KAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSV 310
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
WN M+ G +AI F +Q N KPD + ++ L+AC + +
Sbjct: 311 SWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY 370
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ + I + ++D + G L A + M S + I W S++S G++
Sbjct: 371 VRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEM-SMKNVICWTSMISGYINCGDLR 427
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK 457
A+ DK+ VL + + QF + L +E++I++
Sbjct: 428 EARDL------FDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQR 471
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/482 (39%), Positives = 304/482 (63%), Gaps = 3/482 (0%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+I H++ G D ++ ++ S GD++ A +F + +L WN++I G+ +
Sbjct: 128 EILGHVLHLGFDSDIFVSNAVIHLLVS-CGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 186
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
A+ + +M V I+P +T + + AQL G + H + + GL+ +
Sbjct: 187 GWAYEALNFYREMKVEG-IKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPL 245
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
N ++ MY CG L AR +FD + T +V+W +M++G A+ G +D + +LFD+M ++
Sbjct: 246 ANALMDMYMKCGNLESARKLFDSM-TNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKD 304
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
V WN+MI GYV + KEAL LF EMQ NI P E TMVS L+AC++LGA+ G WIH+
Sbjct: 305 VVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHH 364
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + LN + TA+IDMY KCG +A+QVF +P + W +++ GLA++G +
Sbjct: 365 YIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHG 424
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AI FS + +++ PD ++F+ +L+AC H G V + + YF+ M+ + + P +KHYSCMV
Sbjct: 425 AIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMV 484
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAGLLEEAE+LI+SMP + DA++WG+L ACR HGN+ M ++AA +++++D ++S
Sbjct: 485 DLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSG 544
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL++N+Y + ++EA + R LM++ +EK PGCS IEV+G V+EF+ + HP++ +
Sbjct: 545 IYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQ 604
Query: 486 VY 487
+Y
Sbjct: 605 IY 606
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 226/450 (50%), Gaps = 66/450 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
+ LK+I + ++ TGL +D A+SR++AFC S D++Y + + PN F WN I
Sbjct: 19 ISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAI 78
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGF S PR A++L+ +L +P TYP LFKA A+L L R G+++ G V+ G
Sbjct: 79 RGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGF 138
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D F+ N +I++ +CG L AR MFD+ D+V+WNS
Sbjct: 139 DSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVR-DLVSWNS------------------- 178
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
MI+GYVR EAL +REM+ + IKP E TM+ ++++CA+L +
Sbjct: 179 ------------MINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDL 226
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G H ++ N +L + A++DMY KCG E A ++F+++ K + W +MV G A
Sbjct: 227 GRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQ 286
Query: 300 NGYEN-------------------------------EAIKLFSGLQSSNLKPDYISFIAV 328
+G + EA+ LF+ +Q+ N+ PD ++ ++
Sbjct: 287 SGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSC 346
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC+ G ++ + E +++ ++ + ++D + G + +A ++ + +P
Sbjct: 347 LSACSQLGALDVGI-WIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR- 404
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+++ W +++S HGN A ++I+
Sbjct: 405 NSLTWTAIISGLALHGNAHGAIAYFSEMID 434
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/494 (37%), Positives = 310/494 (62%), Gaps = 6/494 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +LKK+HA I GL+ + +IL+F S +GDI+Y+Y VF+QI P +F WN II
Sbjct: 27 MLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRVFSQISSPTIFSWNIII 86
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S S P +++ +F+ ML + P LTYP L KA A+L + G +H +++K G
Sbjct: 87 RGYSNSKNPIHSLSIFLKML-RHGVAPDYLTYPFLVKASARLSKQKSGVSVHAQIIKTGH 145
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D+FI N++I+MYA+CG + A +F+ + + ++V+WNSM+ G AKCGE+ ++++F+
Sbjct: 146 ESDRFIQNSLIHMYASCGNIMWAHKVFESMQGK-NLVSWNSMLDGYAKCGEMAMAQKVFE 204
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M R+ SW+S I GYV+ +++EA+ +F +M+ K +E TMVS+L+ACA LGA+++
Sbjct: 205 SMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQK 264
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC--WNSMVFGL 297
G +H +++ N + ++ T+++DMY KCG E AL VF + K WN+M+ GL
Sbjct: 265 GRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGL 324
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A +G E++KLF +Q + ++ D I+++ +L AC H G V +A ++F + + + P+
Sbjct: 325 ATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESLVKR-GMTPT 383
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
+HY+CMVD L RAG L A + I +P +P A + G++ S C H N ++A+ +++I
Sbjct: 384 SEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINHRNFDLAETVGRKLI 443
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
ELD N Y+ +SN+YA +++++ R M+ ++K PG S +E+ H F+A
Sbjct: 444 ELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFVEISEIHHRFIAHD 503
Query: 478 RLHPKAPEVYLLLN 491
+ HP + E Y +L+
Sbjct: 504 KTHPDSDETYSMLH 517
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/527 (37%), Positives = 313/527 (59%), Gaps = 36/527 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ L +IHA + L + +++++ S ++YA +F PNLF++N +IR
Sbjct: 53 LPQLHQIHAQIFLHNLFSNSRVVTQLISSSCS-LKSLDYALSIFRCFDHPNLFVFNALIR 111
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G +++S ++ F+ ML S I+P RLT P + K+ A L G LHG V+K GLE
Sbjct: 112 GLAENSRFEGSVSHFVLMLRLS-IRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLE 170
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDT----------------------------- 151
FD F+ +++ MY G L +FDE
Sbjct: 171 FDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASL 230
Query: 152 -----EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEAL 206
E + +WNS+I G + G++D +R LF +M +N VSW +MI+G+ +N ++AL
Sbjct: 231 FEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKAL 290
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
+F M E+ ++P++ T+VS L AC K+GA++ GE IHN+L +N F+LN + TA++DMY
Sbjct: 291 SMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMY 350
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG + A +VF K L W+ M++G A++G ++A++ F ++S+ + PD + F+
Sbjct: 351 AKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFL 410
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
A+LTAC+HSG V+Q ++F M Y I+P++KHY+ +VD LGRAG L+EA I+SMP
Sbjct: 411 AILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPI 470
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
+PD +IWG+L ACR H NIEMA+ A+++++L+ YV +SN+YAA ++E+
Sbjct: 471 NPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERV 530
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
R LMK +EK+PG S IEV+G+VH FVAG H +A E+ L L ++
Sbjct: 531 RTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEI 577
>gi|19071652|gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
Japonica Group]
Length = 545
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/513 (39%), Positives = 311/513 (60%), Gaps = 44/513 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNTI 58
++ +K++HA + G DP + R L F ++ A G I +AYLVF QI +P+ F++NT+
Sbjct: 21 LRHIKQMHAVMALRGFLSDP-SELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTL 79
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSP---IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
IRG + ++ PR+A+ L+ ML ++P +LT+P + +A +G G Q+H VV
Sbjct: 80 IRGAAHTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVV 139
Query: 116 KQGLEFDQFIHNTIIYMYANCGFL-------------------------------SEARL 144
K G E D F+ N +I M+A+CG L AR
Sbjct: 140 KAGCESDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARD 199
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+FDE + D+V+WN MI AK G++ +R LFD++ R+ VSWN MISGYVR
Sbjct: 200 LFDECPVK-DLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLH 258
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN---TIVVTA 261
ALELF +MQ KP TM+SLL+ACA G + G+ +H+ L ++ F N ++ A
Sbjct: 259 ALELFEQMQRMGEKPDIVTMLSLLSACADSGDLDVGQRLHSSL-SDMFSRNGFPVVLGNA 317
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
+IDMY KCG + A +VF ++ K +S WNS+V GLA++G+ E+I +F + ++PD
Sbjct: 318 LIDMYAKCGSMKSAHEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPD 377
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
I+F+AVL AC+H G V++ +++F LM Y+++P+IKHY CMVD LGRAGLL+EA + I
Sbjct: 378 EITFVAVLIACSHGGMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFI 437
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
+M +P+++IW +LLSACR HG IE+AK A +Q+++ +ES YVL+SN+YA+ ++
Sbjct: 438 DTMKCEPNSVIWRTLLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWF 497
Query: 442 EAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+ + R LM + + KE G + VDG V + +
Sbjct: 498 GSEKMRKLMDDSGVNKEAGQTF--VDGSVKDII 528
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/464 (40%), Positives = 293/464 (63%), Gaps = 3/464 (0%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSP-IQPQRLT 90
S G +NYA +F + WN ++ G+++ + LFI+M + P +T
Sbjct: 182 SLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVT 241
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
+ A ++L G ++ + +K+G+ E + + N +I M+A+CG + AR +FDE+
Sbjct: 242 LVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEM 301
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
T DV++W S++ G A ID +R+ FD+M R+ VSW +MI GY+R +FKE L LF
Sbjct: 302 KTR-DVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLF 360
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
R+MQ N+KP EFTMVS+L ACA LGA+ GEW ++ N + +T + A+IDMY KC
Sbjct: 361 RDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKC 420
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G E+A ++FN + KK W +M+ GLA NG+ EA+ +FS + +++ PD I++I V+
Sbjct: 421 GNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVM 480
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
AC H G V + K +F+ M + IKP++ HY CMVD LGRAG L+EA ++I +MP P+
Sbjct: 481 CACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPN 540
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
+I+WGSLL ACR H N+++A+ AA +I+EL+ YVL+ N+YAA +++ R +
Sbjct: 541 SIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKM 600
Query: 450 MKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
M E I+K PGCSL+E++G V+EFVAG + HP++ E+Y L ++
Sbjct: 601 MMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENM 644
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 224/452 (49%), Gaps = 67/452 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M ++ +IH+ IKTGL+ + + ++++ FC T +GD+ YA VF +I +P++FIWNT+I
Sbjct: 48 MYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMI 107
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQ-LGLARDGAQLHGRVVKQG 118
+G+S+ + + + L+ MLV + I+P T+P L K + + + L L+ V+
Sbjct: 108 KGYSRINCSESGVSLYKLMLVHN-IKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGF 166
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L+ + F+ I++++ CG ++ AR +FD D ++VV WN ++ G + +ES+RLF
Sbjct: 167 LDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDG-WEVVTWNVVLSGYNRFKRYEESKRLF 225
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+M E + + + P+ T+V +L+AC+KL +
Sbjct: 226 IEM-----------------------------EKKCECVSPNSVTLVLMLSACSKLKDLV 256
Query: 239 QGEWIHN-FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G+ I+N ++ E N I+ A+IDM+ CG + A VF+ + + + W S+V G
Sbjct: 257 GGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGF 316
Query: 298 A--------------------------MNGYE-----NEAIKLFSGLQSSNLKPDYISFI 326
A ++GY E + LF +Q SN+KPD + +
Sbjct: 317 ANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMV 376
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
++LTAC H G + + ++ + KIK + ++D + G +E+A+K+ M
Sbjct: 377 SILTACAHLGAL-ELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEM-Q 434
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
D W +++ +G+ E A ++E
Sbjct: 435 KKDKFTWTAMIVGLANNGHGEEALTMFSYMLE 466
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/550 (36%), Positives = 310/550 (56%), Gaps = 63/550 (11%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IHA LI T L D AASR+L S ++NYA LVF QI +PN FI NT+++ +++S
Sbjct: 29 QIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKCYTES 88
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
STP A+ + +M + TYP + KA + +G + G VK+G D F+
Sbjct: 89 STPERALRFYAEMR-RKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFV 147
Query: 126 -------------------------------HNTIIYMYANCGFLSEARLMFDEVDTE-- 152
N+++ Y CG + A+ MFDE+
Sbjct: 148 VNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDV 207
Query: 153 -----------------------------FDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
D+V+WNSMI G AK GE++ +R +FDKM+
Sbjct: 208 VSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQ 267
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+N +SW+ MI GY ++ KEAL LFR+M Q IKP ++V ++AC++LGA+ QG WI
Sbjct: 268 KNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWI 327
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++ N L+ +V TA++DMY KCG + A ++FN++P++ + WN M+ GL MNG+
Sbjct: 328 HLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFG 387
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA++ F+ ++ + D + F+ VL AC+H+ V + F M Y+++P ++HY C
Sbjct: 388 KEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGC 447
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+VD LGRAG L++ + +I+SMP P+A +WGSLL ACR H N+ +A+ +++ EL ++
Sbjct: 448 LVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADD 507
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S YVLMSN+YA +E + R LMKE K++K+ G S+IEVDG V EFV+G + H
Sbjct: 508 SGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHILR 567
Query: 484 PEVYLLLNDL 493
E+ L++ L
Sbjct: 568 EEIELVIWSL 577
>gi|225465641|ref|XP_002270476.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Vitis vinifera]
Length = 539
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/496 (38%), Positives = 306/496 (61%), Gaps = 6/496 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M + K+I A I +GL++ ASR+L+F S GDI+++Y +F QI P + WN+II
Sbjct: 25 MSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPSPTISNWNSII 84
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGFS+ P ++ +F+ ML + P LTYP + KA A+L R +H R+ K+GL
Sbjct: 85 RGFSKGKNPNPSVSVFVKMLRFG-VCPDHLTYPFIAKAVARLSELRLALAVHCRIAKEGL 143
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
FD+FI N++I+MY +CG + AR +FDE+ + V+WN+M+ G AKCG++D +R++F+
Sbjct: 144 WFDRFIANSLIHMYGSCGDIGSARKVFDEMLIR-NSVSWNAMLDGYAKCGDLDSARQVFE 202
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M R+ VSW+SMI G V+ ++ AL +F M+ K +E TMVS+L ACA LGA+ Q
Sbjct: 203 SMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANEVTMVSVLCACAHLGALEQ 262
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGL 297
G +H ++V N ++ T+++DMY KCG E A+ VF VP + + WN+++ GL
Sbjct: 263 GRTMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIGGL 322
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A +G +E+++LF +Q + PD I+++ + +AC H G V++A +F + + + P
Sbjct: 323 ATHGLVHESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGKQGMV-PK 381
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
+HY+CMVD L RAG L EA I MP +P A + G+LL+ C H ++A++ +++I
Sbjct: 382 SEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKLI 441
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
EL+ + Y+ +SN+YA ++ A R M+ ++K PG S +EV G +H F+A
Sbjct: 442 ELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVEVLGTLHRFIAHD 501
Query: 478 RLHPKAPEVYLLLNDL 493
+ H ++Y++LN +
Sbjct: 502 KTHNDLEKIYMMLNTI 517
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/503 (39%), Positives = 293/503 (58%), Gaps = 60/503 (11%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M +LK+ H+ +I+ GL+ D A R++ FC I K W
Sbjct: 33 MAELKQYHSQIIRLGLSADNDAMGRVIKFCA---------------ISKSGYLRWQL--- 74
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
RN I ++ ML S + P + TYP L +A +G Q+H V+K G
Sbjct: 75 -------ARNCIFMYSRMLHKS-VSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F N +I+MY N F S ++++RR+FD
Sbjct: 127 ADGFSLNNLIHMYVN--FQS------------------------------LEQARRVFDN 154
Query: 181 MV--SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
M RN+VSWN+MI+ YV++ + EA LF M+ +N+ +F S+L+AC LGA+
Sbjct: 155 MPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALE 214
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
QG+WIH ++ + EL++ + T +IDMYCKCGC E+A +VFN +P+KG+S WN M+ GLA
Sbjct: 215 QGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLA 274
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
M+G AI+LF ++ + PD I+F+ VL+AC HSG V + K YF MTE +KP +
Sbjct: 275 MHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGM 334
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+H+ CMVD LGRAGLLEEA KLI MP +PDA + G+L+ ACR HGN E+ +Q K++IE
Sbjct: 335 EHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIE 394
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ + S YVL++NLYA++ ++E+ + R LM + ++K PG S+IE + V EF+AGGR
Sbjct: 395 LEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGR 454
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
HP+A E+Y L+++ I+ +G
Sbjct: 455 AHPQAKEIYAKLDEILETIRSIG 477
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/505 (39%), Positives = 301/505 (59%), Gaps = 42/505 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNTI 58
++ +K++HA ++ G DP +A R L F +S G +A LVF +I P+ F++NT+
Sbjct: 21 LRQIKQVHALMVLRGFLSDP-SALRELIFASSVGVRGGTAHARLVFDRIPHPDRFMYNTL 79
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSP-----IQPQRLTYPSLFKAYAQLGLARDGAQLHGR 113
IRG + S PR+A+ ++ M S ++P + T+P + +A A +G + GAQ+H
Sbjct: 80 IRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGAQVHAH 139
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI-- 171
VVK G E D F+ N +I M+A CG L A +FD E D VAW++MI G A+ G+I
Sbjct: 140 VVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEARE-DAVAWSAMISGFARRGDIGA 198
Query: 172 -----DES------------------------RRLFDKMVSRNTVSWNSMISGYVRNVKF 202
DES R LFD R+ VSWN+MISGYVR
Sbjct: 199 ARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSH 258
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFEL--NTIVVT 260
K+A+ELF +MQ KP TM+SLL+ACA G + G +H FL + +T++
Sbjct: 259 KQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFSRIGPSTVLGN 318
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
A+IDMY KCG AL+VF + K +S WNS++ GLA++G+ EAI +F + N+KP
Sbjct: 319 ALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQKMLQGNVKP 378
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
D I+F+AVL AC+H G V++ +YF LM + Y I+P++KHY CMVD L RAGLL+EA +
Sbjct: 379 DEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDMLSRAGLLKEAFEF 438
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQF 440
I +M +P+ +IW +LL ACR HG +E+A+ A +++++ + S +VL+SN+YA+ ++
Sbjct: 439 IGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKARSDASGDFVLLSNIYASVGEW 498
Query: 441 EEAMEERLLMKEVKIEKEPGCSLIE 465
+ R LM + + KE GC++++
Sbjct: 499 LGSENMRKLMDDSGVNKEAGCAVVD 523
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/503 (37%), Positives = 306/503 (60%), Gaps = 3/503 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+++LK+IH L+ GL DP + + + + +++Y+ V + P LF +N++I
Sbjct: 22 LRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVLDNSQNPTLFTFNSMI 81
Query: 60 RGFSQSSTPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
R S+SSTP + + +L ++ + P T+ L + AQL G+ +HG VK G
Sbjct: 82 RAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYG 141
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
E+D + + +IYMYA G L +F + E D+V +M+ AK G++ +R+LF
Sbjct: 142 FEYDPHVQSGLIYMYAELGGLDACHRVFSSI-CEPDLVCQTAMVSACAKMGDVGFARKLF 200
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
DKM ++ ++WN+MISGYV+ + +EAL LF MQ + +K +E +MVS+L+AC+ LGA+
Sbjct: 201 DKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALD 260
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
QG W H ++ N + + TA+IDMY KCG +A++VF + +K + W+S + GLA
Sbjct: 261 QGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLA 320
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
MNG + ++LFS ++ +++P+ I+F++VL C+ G V + + +F M++ Y I+P +
Sbjct: 321 MNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRL 380
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD GRAG L+EA I SMP P WG+LL+AC+ + N+EM + A+++I+E
Sbjct: 381 EHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVE 440
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ YVL+SN+YA S ++ R M + K+PGCS+IEV GEVHEF G +
Sbjct: 441 LEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCSVIEVGGEVHEFFVGDK 500
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
HP+ E+ ++L ++ ++ G
Sbjct: 501 SHPRYAEIQVMLGEISRRLKLSG 523
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/492 (37%), Positives = 304/492 (61%), Gaps = 6/492 (1%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+LKKIHAH++K L++ ++++ C A + YA L+F ++ PN F++N +IR +
Sbjct: 29 ELKKIHAHIVKFSLSQSSFLVTKMVDVCNHHA-ETEYANLLFKRVADPNAFLYNAMIRAY 87
Query: 63 SQSSTPRNAILLFIDMLVTS----PIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
+ AI ++ ML S PI P + T+P + K+ A L G Q+HG V K G
Sbjct: 88 KHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFG 147
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ + + N+++ MY C L +A +F+E+ TE D V+WN++I G + G++ +R +F
Sbjct: 148 QKSNTVVENSLVEMYVKCDSLDDAHKVFEEM-TERDAVSWNTLISGHVRLGQMRRARAIF 206
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
++M + SW +++SGY R + +ALE FR MQ I+P E ++VS+L ACA+LGA+
Sbjct: 207 EEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALE 266
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+WIH + F N V A+I+MY KCG + ++F+ + ++ + W++M+ GLA
Sbjct: 267 LGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNERDVISWSTMIVGLA 326
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +EAI+LF +Q + ++P+ I+F+ +L+AC H+G +N+ YF M Y I+P +
Sbjct: 327 NHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGV 386
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C+V+ LG +G L++A +LI+ MP PD+ IWGSLLS+CR H N+E+A A + ++E
Sbjct: 387 EHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLE 446
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ ++ YVL+SNLYA +++ R LM+ ++K PGCS IEVD V EF +G
Sbjct: 447 LEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDD 506
Query: 479 LHPKAPEVYLLL 490
P + +Y +L
Sbjct: 507 SKPFSKAIYRVL 518
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/495 (37%), Positives = 308/495 (62%), Gaps = 4/495 (0%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+ +K++HA LI TGL PI +++L +S I+YA++VF +P+LF++NTII+
Sbjct: 15 RQIKQVHARLITTGLILHPIPTNKLLKQLSSIFAPISYAHMVFDHFPQPDLFLYNTIIKV 74
Query: 62 FSQSSTPR-NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ S+T ++ F ++ + P + ++ FK +G Q+ +K GLE
Sbjct: 75 LAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLE 134
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ F+ N +I MY N F+ +AR +FD D+ +WN M+ G A+ G++DE+R+LFD+
Sbjct: 135 NNLFVTNALIGMYVNLDFVVDARKVFDWSPNR-DMYSWNIMLSGYARLGKMDEARQLFDE 193
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M ++ VSW +MISG ++ F EAL++F M + + P+E+T+ S L ACA L A+ QG
Sbjct: 194 MPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQG 253
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGLA 298
W+H ++ N ++N ++ +IDMY KCG E A ++FN+ P K+ + WN+M+ G A
Sbjct: 254 RWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFA 313
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G EAI++F ++ + P+ ++F+A+L AC+H +V + + YF M Y++KP +
Sbjct: 314 VHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPEL 373
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C+VD LGRAG L+EAE++I SM PD IWG+LLSAC+ H + EM ++ K + E
Sbjct: 374 EHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKE 433
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD N +VL++N+Y+ + + EA R + E +K PGCS IE++G H+F+ G R
Sbjct: 434 LDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKTPGCSSIELNGMFHQFLVGDR 493
Query: 479 LHPKAPEVYLLLNDL 493
HP+ ++YL L+++
Sbjct: 494 SHPQTKQLYLFLDEM 508
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/501 (38%), Positives = 299/501 (59%), Gaps = 7/501 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ L +IHA L + GL PI + L + G ++Y+ +F + + P++F W II
Sbjct: 43 ISHLLQIHAVLFRHGLDHHPILNFK-LQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIH 101
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G + A+ + ML T ++P T+ S+ K L G LH + VK G +
Sbjct: 102 GHALRGLHEQALNFYAQML-TQGVEPNAFTFSSILK----LCPIEPGKALHSQAVKLGFD 156
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ ++ +YA G + A+ +FD + E +V+ +M+ AK GE+D +R LFD
Sbjct: 157 SDLYVRTGLLDVYARGGDVVSAQQLFDTM-PEKSLVSLTAMLTCYAKHGELDAARVLFDG 215
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ V WN MI GY +N EAL LFR M + KP+E T++S+L+AC +LGA+ G
Sbjct: 216 MEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 275
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
W+H+++ N + N V TA++DMY KCG E A VF+ + K + WNSM+ G AM+
Sbjct: 276 RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMH 335
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ EA++LF + L P I+FI +L+AC HSG V + D F M + Y I+P I+H
Sbjct: 336 GFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEH 395
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMV+ LGRAG +E+A +L+++M +PD ++WG+LL ACR HG I + ++ + +++ +
Sbjct: 396 YGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQN 455
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
S Y+L+SN+YAA ++ R +MK+ ++KEPGCS IEV+ +VHEF+AGG H
Sbjct: 456 LANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNH 515
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
PK E+Y++L ++ ++ G
Sbjct: 516 PKRKEIYMMLEEINGWLKSHG 536
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/532 (37%), Positives = 316/532 (59%), Gaps = 36/532 (6%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L++IH L + + ++ ++ C+S ++YA +F + + N +++N +IRG +
Sbjct: 58 LRQIHGQLYRCNVFSSSRVVTQFISSCSS-LNSVDYAISIFQRFELKNSYLFNALIRGLA 116
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
++S ++I F+ ML I P RLT+P + K+ A L G LH ++K GLEFD
Sbjct: 117 ENSRFESSISFFVLML-KWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDS 175
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVD---------------------------TEF--- 153
F+ +++ MY L A +FDE TE
Sbjct: 176 FVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDS 235
Query: 154 ----DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
D +WNS+I G K G++ ++ LF KM +N VSW +M++G+ +N ++ALE F
Sbjct: 236 MPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETF 295
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
M E+ +P+++T+VS L+ACAK+GA+ G IHN+L N F+LN ++ TA++DMY KC
Sbjct: 296 FCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKC 355
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G E A +VF+ +KGL W+ M++G A++G+ +A++ F ++ + KPD + F+AVL
Sbjct: 356 GNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVL 415
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
AC+HSG+VN+ +F M Y I+PS+KHY+ +VD LGRAG L+EA K IR+MP PD
Sbjct: 416 NACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPD 475
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
++WG+L ACR H N+EMA+ A+K++++L+ YV +SN YA+ ++++A R+
Sbjct: 476 FVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVS 535
Query: 450 MKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
M++ K+PG S IEVD ++H FVAG H +A E+Y L+++ +E G
Sbjct: 536 MRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKG 587
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/491 (38%), Positives = 309/491 (62%), Gaps = 9/491 (1%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTS------PAGDINYAYLVFTQIKKPNLFIWN 56
DLK IH L++T L D ASR+LA C P + YAY +F+QI+ PNLF++N
Sbjct: 27 DLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFN 86
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR FS + P A + ML S I P +T+P L KA +++ G Q H ++V+
Sbjct: 87 LLIRCFSTGAEPSKAFGFYTQML-KSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVR 145
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G + D ++ N++++MYANCGF++ A +F ++ DVV+W SM+ G KCG ++ +R
Sbjct: 146 FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR-DVVSWTSMVAGYCKCGMVENARE 204
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M RN +W+ MI+GY +N F++A++LF M+ + + +E MVS++++CA LGA
Sbjct: 205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGA 264
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ GE + ++V + +N I+ TA++DM+ +CG E+A+ VF +P+ W+S++ G
Sbjct: 265 LEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKG 324
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA++G+ ++A+ FS + S P ++F AVL+AC+H G V + + + M + + I+P
Sbjct: 325 LAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEP 384
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++HY C+VD LGRAG L EAE I M P+A I G+LL AC+ + N E+A++ +
Sbjct: 385 RLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML 444
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
I++ S YVL+SN+YA + Q+++ R +MKE ++K PG SLIE+DG++++F G
Sbjct: 445 IKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMG 504
Query: 477 -GRLHPKAPEV 486
+ HP+ ++
Sbjct: 505 DDQKHPEMGKI 515
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/488 (37%), Positives = 303/488 (62%), Gaps = 9/488 (1%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+DL ++HAH ++ L++ A++I+ C + G + +A VF+Q+++PNL + N +I+
Sbjct: 27 RDLLRVHAHAVRLSLSQSSYLATQIVHLCNAH-GRVAHATRVFSQVREPNLHLHNAMIKA 85
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQ------PQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
++Q+ +AI ++I ML P R TYP L KA L G Q+HG VV
Sbjct: 86 YAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGLMALDLGKQVHGHVV 145
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
+ G E + + N++I MY G L AR +FD + E DVV+WN++I A+ G++ ++R
Sbjct: 146 RSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQ-ERDVVSWNTVISAHARLGQMRKAR 204
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+F+ M + VSW +++SGY F A+E FR MQ + +P + ++V++L ACA+LG
Sbjct: 205 AVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSIVAVLPACAQLG 264
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A+ G WI+ + + T V A+++MY KCGC ++ALQ+FN + +K + W++MV
Sbjct: 265 ALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQLFNGMAEKDVISWSTMVG 324
Query: 296 GLAMNGYENEAIKLFSGLQ-SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLA +G EA++LF+ ++ +KP+ I+F+ +L+AC+H+G +++ DYF M + Y I
Sbjct: 325 GLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLDEGLDYFDRMNDVYGI 384
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+P ++HY C+VD L R+G ++ LI MP DA IWGS+L+ACR HG+++ A AA+
Sbjct: 385 EPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVLNACRSHGDVDTAVLAAE 444
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+++ L+ + V+++N+YAA+ ++ E R ++ + K PGCSLIEVD V EFV
Sbjct: 445 RLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMRKTPGCSLIEVDNVVQEFV 504
Query: 475 AGGRLHPK 482
AG L P+
Sbjct: 505 AGEDLKPE 512
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/482 (40%), Positives = 299/482 (62%), Gaps = 6/482 (1%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA LI+ G ++DP +L C S I+YA +F PN++++ +I GF S
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSC-SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSG 126
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY-AQLGLARDGAQLHGRVVKQGLEFDQFI 125
+AI L+ ML S I P S+ KA +QL L R+G ++H R +K GL ++ +
Sbjct: 127 NYFDAIQLYSRMLHDS-ILPDNYLMASILKACGSQLAL-REGREVHSRALKLGLSSNRLV 184
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
I+ +Y CG L +AR +F+E+ DVVA MI + G ++E+ +F ++ ++
Sbjct: 185 RLRIMELYGKCGELGDARRVFEEMPE--DVVASTVMISSYSDQGLVEEAGAVFSRVRRKD 242
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
TV W +MI G+VRN + ALE FR MQ +N++P+EFT+V +L+AC++LGA+ G W+H+
Sbjct: 243 TVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHS 302
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ ELN V A+I+MY +CG + A VF+ + + + +N+M+ GL+MNG +
Sbjct: 303 YMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQ 362
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AI+LF + L+P ++F+ VL AC+H G V+ F MT Y ++P I+HY CMV
Sbjct: 363 AIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMV 422
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGR G LEEA LIR+M PD I+ G+LLSAC+ H N+E+ +Q AK + + + +S
Sbjct: 423 DLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSG 482
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL+S++YA+S +++EA + R MKE ++KEPGCS IEV+ E+HEF+ G HP+
Sbjct: 483 TYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKER 542
Query: 486 VY 487
+Y
Sbjct: 543 IY 544
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/550 (36%), Positives = 307/550 (55%), Gaps = 63/550 (11%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IHA LI T L D AASR+L S ++NYA LVF QI +PN FI NT+++ +++S
Sbjct: 29 QIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKCYTES 88
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
STP A+ + +M + TYP + KA + +G + G VK+G D F+
Sbjct: 89 STPERALRFYAEMR-KKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFV 147
Query: 126 -------------------------------HNTIIYMYANCGFLSEARLMFDEVDTE-- 152
N+++ Y CG + A+ MFDE+
Sbjct: 148 VNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDV 207
Query: 153 -----------------------------FDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
D+V+WNSMI G AK GE++ +R +FBKM+
Sbjct: 208 VSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKMLQ 267
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+N +SW+ MI GY + KEAL LFR+M Q IKP ++V ++AC++LGA+ QG WI
Sbjct: 268 KNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWI 327
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++ N L+ +V TA++DMY KCG + A +FN++P++ + WN M+ GL MNG+
Sbjct: 328 HLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGFG 387
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA++ F ++ + D + F+ VL AC+H+ V + F M Y+++P ++HY C
Sbjct: 388 KEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGC 447
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+VD LGRAG L++ + +I+SMP P+A +WGSLL ACR H N+ +A+ +++ EL ++
Sbjct: 448 LVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADD 507
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S YVLMSN+YA +E + R LMKE K++K+ G S+IEVDG V EFV+G + H
Sbjct: 508 SGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHILR 567
Query: 484 PEVYLLLNDL 493
E+ L++ L
Sbjct: 568 EEIELVIWSL 577
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/482 (40%), Positives = 299/482 (62%), Gaps = 6/482 (1%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA LI+ G ++DP +L C S I+YA +F PN++++ +I GF S
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSC-SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSG 126
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY-AQLGLARDGAQLHGRVVKQGLEFDQFI 125
AI L+ ML S I P S+ KA +QL L R+G ++H R +K G ++ +
Sbjct: 127 NYLEAIQLYSRMLHES-ILPDNYLMASILKACGSQLAL-REGREVHSRALKLGFSSNRLV 184
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
I+ +Y CG L +AR +F+E+ DVVA MI + G ++E+ +F ++ ++
Sbjct: 185 RLRIMELYGKCGELGDARRVFEEMPE--DVVASTVMISSYSDQGLVEEAGAVFSRVRRKD 242
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
TV W +MI G+VRN + ALE FR MQ +N++P+EFT+V +L+AC++LGA+ G W+H+
Sbjct: 243 TVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHS 302
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ ELN V A+I+MY +CG + A VF+ + + + +N+M+ GL+MNG +
Sbjct: 303 YMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQ 362
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AI+LF + L+P ++F+ VL AC+H G V+ + F M Y+++P I+HY CMV
Sbjct: 363 AIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMV 422
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGR G LEEA LIR+M PD I+ G+LLSAC+ H N+E+ +Q AK++ + + +S
Sbjct: 423 DLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSG 482
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL+S++YA+S +++EA + R MKE ++KEPGCS IEV+ E+HEF+ G HP+
Sbjct: 483 TYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKER 542
Query: 486 VY 487
+Y
Sbjct: 543 IY 544
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/499 (38%), Positives = 308/499 (61%), Gaps = 9/499 (1%)
Query: 1 MKDLKKIHAHLIKTGLAK-DP-IAASRILAFCTSPAGDINYAYLVFTQ-IKKPNLFIWNT 57
M+ L +I A +I + + DP I A + + +S G++ ++ L+F + PN+F +N
Sbjct: 37 MRQLFEIQAQIIASPIPSIDPNIIAVKFIGV-SSSHGNLRHSVLIFNHFLSFPNIFAYNA 95
Query: 58 IIRGFSQSSTPRNAILLFIDMLV--TSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
+++ FSQ + I F + LV +P P T+ S+ KA A L +G ++H V
Sbjct: 96 LLKAFSQHNAWHTTISYFNNQLVLPNAP-NPDEYTFTSVLKACAGLAQVLEGQKVHCFVT 154
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G E + F+ N+++ +Y G A+ +FDE+ DVV+WN++I G G +D++R
Sbjct: 155 KYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR-DVVSWNTLISGYCFSGMVDKAR 213
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKL 234
+FD M+ +N VSW++MISGY RN K+ +A+ELFR+MQ E + P++ T+VS+L+ACA L
Sbjct: 214 MVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHL 273
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA+ G+WIH F+ N E+ + A+ DMY KCGC A VF+ + ++ + W+ ++
Sbjct: 274 GALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIII 333
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLAM GY NEA F+ + L+P+ ISF+ +LTAC H+G V++ +YF +M + Y I
Sbjct: 334 MGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGI 393
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P I+HY C+VD L RAG L++AE LI SMP P+ I+WG+LL CR + + E ++
Sbjct: 394 TPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVW 453
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+I+ELD N S V ++N+YA+ + ++A RL M++ K K PGCS IE++ V+EF
Sbjct: 454 RILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFF 513
Query: 475 AGGRLHPKAPEVYLLLNDL 493
G HP++ +Y ++ +L
Sbjct: 514 MGDSSHPQSLRIYSMIREL 532
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/495 (38%), Positives = 304/495 (61%), Gaps = 15/495 (3%)
Query: 7 IHAHLIKTGLAKDPIAASRILAF-----CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
IHAH++K G+ + AAS ++ + A + A + T P +WN +I G
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAP--VMWNALISG 135
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD---GAQLHGRVVKQG 118
++S + F+DM+ S + +TY S+ A G +D G Q+H RV++ G
Sbjct: 136 HNRSGRFELSCCSFVDMVRASAMATA-VTYVSVLSA---CGKGKDLLLGMQVHKRVLESG 191
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ DQ + N ++ MYA CG + A ++F+ + + +W S+I GL + G++D +R LF
Sbjct: 192 VLPDQRVENALVDMYAECGDMDAAWVLFEGMQMR-SMASWTSVISGLVRSGQVDRARDLF 250
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D M R+T++W +MI GYV+ +F++ALE FR MQ ++ EFTMVS++ ACA+LGA+
Sbjct: 251 DHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALE 310
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
GEW ++ +++ V A+IDMY KCG ERAL VF + + W +++ GLA
Sbjct: 311 TGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLA 370
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+NG EAI +F + + PD ++F+ VLTAC H+G V++ +++F MTE Y I P++
Sbjct: 371 VNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTV 430
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
HY C++D LGRAG L+EA I MP P++ IWG+LL++CR +GN E+ + AA++++E
Sbjct: 431 VHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLE 490
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD + S Y+L+SN+YA S ++++ R ++ E I+KEPGCS+IE++G +HEFVA R
Sbjct: 491 LDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADR 550
Query: 479 LHPKAPEVYLLLNDL 493
HP E+Y L ++
Sbjct: 551 SHPMNKEIYSKLENV 565
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 159/375 (42%), Gaps = 47/375 (12%)
Query: 60 RGFSQSST-----PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQ----- 109
RG + SS+ A+ ++ ML +P T+PSL KA A A A
Sbjct: 19 RGRAASSSVSGHGAEEAVAGYVRMLAGGA-RPDAYTFPSLLKAAAAARGAAVAAASVGGA 77
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
+H VVK G+E + +++I MYA G + AR + LA G
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAV--------------LEAACLATGG 123
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
V WN++ISG+ R+ +F+ + F +M + + T VS+L+
Sbjct: 124 GA--------------PVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLS 169
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
AC K + G +H ++ + + V A++DMY +CG + A +F + + ++
Sbjct: 170 ACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMAS 229
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
W S++ GL +G + A LF + + D I++ A++ G+ A + F M
Sbjct: 230 WTSVISGLVRSGQVDRARDLFDHMP----ERDTIAWTAMIDGYVQVGRFRDALETFRYM- 284
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEK---LIRSMPSDPDAIIWGSLLSACRKHGNI 406
+ K++ +V A + G LE E + + D + +L+ K G+I
Sbjct: 285 QICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSI 344
Query: 407 EMAKQAAKQIIELDK 421
E A K + DK
Sbjct: 345 ERALDVFKDMHNRDK 359
>gi|449445234|ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 542
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/503 (37%), Positives = 310/503 (61%), Gaps = 9/503 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +LK+IHA L G+++D S++L F SPA D++Y+Y + + P F WNT+I
Sbjct: 26 MFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLILNVPNPTTFNWNTLI 85
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R FS + P +I +FI ML + + P LTYP L KA ++L G +H +VK G
Sbjct: 86 RAFSNTKNPNPSITVFIKML-QNGVSPDYLTYPFLVKATSKLLNQELGMAVHVHIVKSGH 144
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D+FI N++I+MYA+C ++ AR +FDE+ + ++V WN+M+ G AKCG+++ +R +F+
Sbjct: 145 EIDKFIQNSLIHMYASCRDIASARKVFDEMPRK-NLVTWNAMLDGYAKCGDLNMAREVFN 203
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M ++ VSW+S+I GYV+ + EA+ LF M +E T+VS L ACA LGA+
Sbjct: 204 LMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLVSALCACAHLGALEH 263
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN--TVPKKGLSCWNSMVFGL 297
G +H ++V N L ++ T+++DMY KCG AL VF ++ + + WN+++ GL
Sbjct: 264 GRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEADVLIWNAIIGGL 323
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A +G EA+ LF ++ + PD I+++ +L+ C H G V +A +F + + + + P
Sbjct: 324 ATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYFFDCLRK-HGMIPK 382
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
++HY+CMVDAL RAG + EA + + MP P + + G+LLS C KHG +++AK ++++
Sbjct: 383 VEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALLSGCMKHGKLDIAKVVGRRLV 442
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
ELD N YV +SN+YAA ++++A R M+ ++K PG S IEV G +H F+A
Sbjct: 443 ELDPNHDGRYVGLSNIYAADKRWDDAKNIREAMERKGVKKSPGFSFIEVYGVLHRFMAHD 502
Query: 478 RLHPKAPEVYLLLNDLGLLIQEM 500
+ H +++++LN L++ +M
Sbjct: 503 KTHGDCEQIFMMLN---LIVDQM 522
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/493 (39%), Positives = 312/493 (63%), Gaps = 2/493 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ LK++HA +I + ++A L+ + + YA +F ++ P ++N++IR
Sbjct: 80 LRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNPPPSLYNSLIR 139
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S S TP A+ L+ ML S ++P +TYP + KA + + G +H VVK G E
Sbjct: 140 ALSSSKTPLEALPLYHTML-QSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFE 198
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D +I +++I++YAN L A+ +F+ DVV+WN+MI G K E+ +R +FD+
Sbjct: 199 CDSYIVSSLIHLYANGKDLGAAKQLFNLCSAR-DVVSWNAMIDGYVKHVEMGHARMVFDR 257
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
MV R+ +SWN+MI+GY K EAL LF +M+ +KP+E T+VSLL+ACA LGA+ +G
Sbjct: 258 MVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKG 317
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H ++ N E+N+IV TA++DMY KCG A QVFN + K + WN+++ G+A++
Sbjct: 318 LHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIH 377
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA +LF ++ + ++P+ I+F+A+L+AC+H+G V++ + M+ +Y I+P ++H
Sbjct: 378 GNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEH 437
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y C++D L RAG LEEA +LI +MP +P+ G+LL CR HGN E+ + K++I L
Sbjct: 438 YGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQ 497
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
S Y+L+SN+YAA+ ++++A + R LMK I K PG S+IE+ G VH FVAG H
Sbjct: 498 PCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSH 557
Query: 481 PKAPEVYLLLNDL 493
P++ ++Y LN++
Sbjct: 558 PESNKIYEKLNEI 570
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/516 (38%), Positives = 317/516 (61%), Gaps = 43/516 (8%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCT--SPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+L++IHA +IKT L SR++AFC+ +G ++YA VF++I+ PN FI+ +I+
Sbjct: 21 ELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIK 80
Query: 61 GFSQSSTPRNAILLFIDML----VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
GFS +S P +++L+ ML +S ++ + PS+ KA +L +G Q+HG+V+K
Sbjct: 81 GFSDTSNPVESLILYARMLSCLNYSSGVE---FSIPSVLKACGKLLAFDEGRQVHGQVLK 137
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
L FD F+ N+++ MY + G + AR +FD + DVV+WNSMI G K GEI+ +
Sbjct: 138 THLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNR-DVVSWNSMIAGYLKAGEIELASE 196
Query: 177 LFDKMVSRNTVS-------------------------------WNSMISGYVRNVKFKEA 205
LFD+M R+ VS W SMIS YV+N +A
Sbjct: 197 LFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISAYVQNRCPMKA 256
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT-IVVTAIID 264
L+LFREM ++P +VS+L+A A LG + +G+W+H ++ N EL++ + +A+ID
Sbjct: 257 LDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALID 316
Query: 265 MYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
MY KCG E A VF ++ ++ + WNSM+ GLA++G EA+ +F ++ +++P+ I
Sbjct: 317 MYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEI 376
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F+ +L+ C+H G V + + YF M E YKI P I+HY CM+D GRAG LE+A +I++
Sbjct: 377 TFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQN 436
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
MP + D + W ++LSA KHG+IE+ K AA + IEL ++S YVL+SN+YA + ++++
Sbjct: 437 MPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDV 496
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ RL+M++ ++K GCS + VBG+VHEF+ G L
Sbjct: 497 AKIRLMMRQRGVKKIAGCSSMLVBGKVHEFLXGKEL 532
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/485 (38%), Positives = 300/485 (61%), Gaps = 3/485 (0%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+LK++HAHL+KT + SR+ + C + +YA L+F + + WNT +R F
Sbjct: 30 ELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSS-FSYAKLIFQLLDASEVTHWNTCLRSF 88
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++ +P +AI LF L I P T + KA ++L R+G +HG V K GL+ +
Sbjct: 89 AEGDSPADAISLFYR-LREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSN 147
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ N I+++YA CG + AR +FD++ + DV+ WN MI L K G+ + + +LF +M
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKM-PQRDVITWNIMIARLVKMGDAEGAYKLFAEMP 206
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
RN SW SMI GY + K KEA++LF EM++ + P+E T+V++L ACA +G + G
Sbjct: 207 ERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRR 266
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH+F + +E N V +IDMY KCGC E A ++F+ + ++ + W++M+ GLA +G
Sbjct: 267 IHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGR 326
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+A+ LF+ + ++ +KP+ ++FI +L AC+H G V + + YF MT Y I P I+HY
Sbjct: 327 AEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYG 386
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD RAGLL+EA + I +MP P+ ++WG+LL C+ H NI++A++A + + +LD
Sbjct: 387 CMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPL 446
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
YV++SN+YA + ++E+ R LM++ ++K PG S I V+G V+ FVAG HP+
Sbjct: 447 NDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQ 506
Query: 483 APEVY 487
E++
Sbjct: 507 TEEIF 511
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/497 (39%), Positives = 295/497 (59%), Gaps = 5/497 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSP-AGDINYAYLVFTQIKKPNLFIWNTII 59
MK LK+I A +IKT + +P A++ L CTSP GD+ YA VF I PN F+WN II
Sbjct: 1 MKQLKQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAII 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R +S S P A L + ML +S + T+P L +A L + Q+HG V+K G
Sbjct: 61 RAYSNSDEPELAFLSYQQML-SSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGF 119
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F N ++++YA CG + AR +FD + E D V+WN MI G K G++ + +F
Sbjct: 120 GSDVFALNALLHVYALCGEIHCARQLFDNI-PERDAVSWNIMIDGYIKSGDVKTAYGVFL 178
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M +N VSW S+ISG V + EAL L EMQ + + SLL ACA LGA+ Q
Sbjct: 179 DMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQ 238
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGL 297
G W+H +++ N +++ ++ A+++MY KCG E AL VF + +K + W +M+ G
Sbjct: 239 GRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGF 298
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A++G EA++ F+ ++ ++P+ I+F AVL AC++ G V + K+ F M Y + PS
Sbjct: 299 AIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPS 358
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY CMVD LGR+G L+EA++LI+ MP P A+IWG+LL AC H + + Q ++
Sbjct: 359 IEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLV 418
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
E+D + S Y+ ++ + AA +++EA E RL MK + + PG S + ++G VHEF+AG
Sbjct: 419 EVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISPGKSSVTLNGIVHEFLAGH 478
Query: 478 RLHPKAPEVYLLLNDLG 494
+ HP+ ++ L L +
Sbjct: 479 QDHPQMEQIQLKLKQIA 495
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/497 (36%), Positives = 310/497 (62%), Gaps = 11/497 (2%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTS---PAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K++HAH+I+ GL++ ++++ T P G +Y LVF Q+ PN F+W +IR
Sbjct: 58 IKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMG--SYPLLVFGQVNYPNPFLWTAMIR 115
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR-VVKQGL 119
G++ + + M + P T+ +LFKA G Q+H + ++ G
Sbjct: 116 GYALQGLLSESTNFYTRMR-RDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGF 174
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D ++ N++I +Y CGFL AR +FDE+ +E DVV+W +I+ AK G+++ + LFD
Sbjct: 175 ASDLYVGNSMIDLYVKCGFLGCARKVFDEM-SERDVVSWTELIVAYAKYGDMESASGLFD 233
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+ S++ V+W +M++GY +N + KEALE F++MQ+ ++ E T+ +++ACA+LGA++
Sbjct: 234 DLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKH 293
Query: 240 GEWIHNFLVTNCF--ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
WI + + F N +V +A+IDMY KCG P+ A +VF + ++ + ++SM+ G
Sbjct: 294 ANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGY 353
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AM+G + A++LF + + ++P+ ++FI +L+AC+H+G V Q + F M + + + PS
Sbjct: 354 AMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS 413
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
HY+CMVD LGRAG LEEA L+++MP +P+ +WG+LL ACR HGN ++A+ AA ++
Sbjct: 414 PDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELF 473
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE-VDGEVHEFVAG 476
+L+ N Y+L+SN+YA++ ++EE + R +++E +K PGCS E +GE+H+F AG
Sbjct: 474 KLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAG 533
Query: 477 GRLHPKAPEVYLLLNDL 493
HP++ E+ L L
Sbjct: 534 DTTHPRSSEIRQALKQL 550
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/489 (37%), Positives = 302/489 (61%), Gaps = 2/489 (0%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+ KKIHA +I GL++ ++++ C GD++YA +F Q+ PN+F++N+IIR +
Sbjct: 25 EWKKIHACIIVHGLSQSSFMVTKMVDLC-DKLGDMDYATRLFNQVSNPNVFLYNSIIRAY 83
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ +S + I ++ +L + P R T+P +FK+ A LG G Q+HG + K G F
Sbjct: 84 THNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHLYKFGPRFH 143
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
N +I MY L +A +FDE+ +E DV++WNS++ G A+ G++ +++ LF M+
Sbjct: 144 VVTENALIDMYMKFDDLVDAHKVFDEM-SERDVISWNSLLSGYARLGQMKKAKGLFHLMI 202
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+ VSW +MISGY + EA++ FREMQ I+P E +++S+L +CA LG++ G+W
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLELGKW 262
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH + T V A+I+MY KCG +A+Q+F K + W++M+ G A +G
Sbjct: 263 IHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISWSTMISGYAYHGN 322
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+ A + F +Q + +KP+ I+F+ +L+AC+H G Q YF +M + Y+I+P I+HY
Sbjct: 323 AHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMMRQDYQIEPKIEHYG 382
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C++D L RAG LE A ++ ++MP PD+ IWGSLLS+CR GN+++A A ++E++ +
Sbjct: 383 CLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNLDVALVAMDHLVEVEPD 442
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+ YVL++N+YA ++E+ R ++++ ++K PGCSLIEV+ V EFVAG P
Sbjct: 443 DMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLIEVNNIVQEFVAGDNSKPF 502
Query: 483 APEVYLLLN 491
E+ L+L
Sbjct: 503 WTEISLVLQ 511
>gi|224058579|ref|XP_002299552.1| predicted protein [Populus trichocarpa]
gi|222846810|gb|EEE84357.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/475 (40%), Positives = 295/475 (62%), Gaps = 13/475 (2%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+ ++HA L K G K+P+A +R+L + + S +INYA +F K PN F +N +IRG
Sbjct: 40 EFAQLHARLTKLGFIKNPLALTRLLCYSSISQYANINYAQSIFNFDKNPNTFAYNVMIRG 99
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++Q P NA+ LF ML + +LT+P + KA +Q+ +G Q+HG V K GL
Sbjct: 100 YAQREKPENALSLFYSMLCNANSGQNKLTFPFVLKACSQVRAIEEGKQVHGLVFKHGLSE 159
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+ N++I MY++CG + A +F+++D DVV+WNSMI GL G ++E +++FD+M
Sbjct: 160 DLFVQNSLISMYSSCGLIGFACQVFNKIDDP-DVVSWNSMISGLVDLGFVEEGKQMFDRM 218
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ V+WN +I GYV+ EA ELF +M+ FTMVS+L AC+ LGA+ QGE
Sbjct: 219 SKRSLVTWNCLIDGYVKAGLLMEARELFDQMR--------FTMVSVLTACSYLGALEQGE 270
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
W+ + N ++N+++ TA+++M+ KCG ERAL VF ++ ++ + WNS++ LA +G
Sbjct: 271 WMQAHIEKNGIDVNSVLGTALVEMFAKCGSIERALSVFKSIEERDVGAWNSIIHKLAAHG 330
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ EA +FS + SN D I F+ +L+ C H G V++ K +F LM+E Y + P ++HY
Sbjct: 331 HGQEAFAIFSDMLRSNTLLDGIIFLGLLSVCRHLGLVDEGKRFFQLMSEEYGLVPKVEHY 390
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
CMVD L A LLEEA LI S + +WG+LL + NI M + AAK +++
Sbjct: 391 GCMVDLLCHADLLEEARDLIDSSHASQMKSSVPMWGALLGVSCQLKNIVMGEYAAKHLLQ 450
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
LD + Y ++SNLY+A+ +E+A+E R MK+ +EK PG S +E+DG V +F
Sbjct: 451 LDPFDGNCYTVLSNLYSAAGLYEKAIEVRNEMKKQGLEKIPGSSSMEIDGLVLDF 505
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/482 (38%), Positives = 296/482 (61%), Gaps = 3/482 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H H++K GL + + ++ G ++ A VF K ++ WN II +++
Sbjct: 138 RQLHGHVLKHGLQYNVFVHTALVQMYLL-CGQLDTARGVFDVCPKADVITWNMIISAYNK 196
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ LF+ ++ + P +T + A ++L R G ++H V +E +
Sbjct: 197 VGKFEESRRLFL-VMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV 255
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N +I MYA+CG + A +F ++ D+++W +++ G GEID +R FDKM +
Sbjct: 256 LENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSGFTNLGEIDVARNYFDKMPEK 314
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSW +MI GY+R+ +FKEALELFR MQ N+KP EFTMVS+L ACA LGA+ GEWI
Sbjct: 315 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 374
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N + + V A+IDMY KCG ++A +F + ++ W +M+ GLA+NG+
Sbjct: 375 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 434
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A+ +FS + +++ PD I++I VL+AC H+G V++ + YF MT + I+P+I HY C+
Sbjct: 435 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 494
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD L RAG L+EA ++I +MP ++I+WG+LL+ CR + +MA+ KQI+EL+ +
Sbjct: 495 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNG 554
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+ N+YAA ++ + E R +M + I+K PGCSLIE++G VHEFVAG R HP+
Sbjct: 555 AVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTK 614
Query: 485 EV 486
+
Sbjct: 615 NI 616
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 230/442 (52%), Gaps = 69/442 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M L+++H IK GL +P+ +R++ FC T GD YA +F +I +PNLFIWNT+I
Sbjct: 31 MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMI 90
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S+ P+ + L+++ML ++P R T+P LFK + + G QLHG V+K GL
Sbjct: 91 RGYSRLDFPQLGVSLYLEML-RRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGL 149
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+++ F+H ++ MY CG L AR +FD V + DV+ WN +I K G+ +ESRRLF
Sbjct: 150 QYNVFVHTALVQMYLLCGQLDTARGVFD-VCPKADVITWNMIISAYNKVGKFEESRRLF- 207
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+V M+++ + P+ T+V +L+AC+KL +R
Sbjct: 208 -LV-----------------------------MEDKQVLPTTVTLVLVLSACSKLKDLRT 237
Query: 240 GEWIHNFLVTNC-FELNTIVVTAIIDMYCKCGCPERALQVFNT----------------- 281
G+ +H++ V NC E N ++ A+IDMY CG + AL +F +
Sbjct: 238 GKKVHSY-VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT 296
Query: 282 --------------VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIA 327
+P+K W +M+ G + EA++LF +Q++N+KPD + ++
Sbjct: 297 NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVS 356
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
VLTAC H G + + ++ + KIK + + ++D + G +++AE + R M S
Sbjct: 357 VLTACAHLGAL-ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREM-SQ 414
Query: 388 PDAIIWGSLLSACRKHGNIEMA 409
D W +++ +G+ E A
Sbjct: 415 RDKFTWTAMIVGLAVNGHGEKA 436
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 136/277 (49%), Gaps = 5/277 (1%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G+ +RRLFD++ N WN+MI GY R + + L+ EM + +KP +T L
Sbjct: 66 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+ A+ G +H ++ + + N V TA++ MY CG + A VF+ PK +
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 185
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN ++ G E+ +LF ++ + P ++ + VL+AC+ + K + +
Sbjct: 186 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 245
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
+ K++ ++ + M+D G ++ A + RSM ++ D I W +++S G I++
Sbjct: 246 -KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM-NNRDIISWTTIVSGFTNLGEIDV 303
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
A+ ++ E D + M + Y S +F+EA+E
Sbjct: 304 ARNYFDKMPEKD---YVSWTAMIDGYIRSNRFKEALE 337
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/482 (38%), Positives = 296/482 (61%), Gaps = 3/482 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H H++K GL + + ++ G ++ A VF K ++ WN II +++
Sbjct: 159 RQLHGHVLKHGLQYNVFVHTALVQMYLL-CGQLDTARGVFDVCPKADVITWNMIISAYNK 217
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ LF+ ++ + P +T + A ++L R G ++H V +E +
Sbjct: 218 VGKFEESRRLFL-VMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLV 276
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N +I MYA+CG + A +F ++ D+++W +++ G GEID +R FDKM +
Sbjct: 277 LENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSGFTNLGEIDVARNYFDKMPEK 335
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSW +MI GY+R+ +FKEALELFR MQ N+KP EFTMVS+L ACA LGA+ GEWI
Sbjct: 336 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 395
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N + + V A+IDMY KCG ++A +F + ++ W +M+ GLA+NG+
Sbjct: 396 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 455
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A+ +FS + +++ PD I++I VL+AC H+G V++ + YF MT + I+P+I HY C+
Sbjct: 456 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 515
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD L RAG L+EA ++I +MP ++I+WG+LL+ CR + +MA+ KQI+EL+ +
Sbjct: 516 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNG 575
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+ N+YAA ++ + E R +M + I+K PGCSLIE++G VHEFVAG R HP+
Sbjct: 576 AVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQTK 635
Query: 485 EV 486
+
Sbjct: 636 NI 637
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 230/442 (52%), Gaps = 69/442 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M L+++H IK GL +P+ +R++ FC T GD YA +F +I +PNLFIWNT+I
Sbjct: 52 MDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMI 111
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S+ P+ + L+++ML ++P R T+P LFK + + G QLHG V+K GL
Sbjct: 112 RGYSRLDFPQLGVSLYLEML-RRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGL 170
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+++ F+H ++ MY CG L AR +FD V + DV+ WN +I K G+ +ESRRLF
Sbjct: 171 QYNVFVHTALVQMYLLCGQLDTARGVFD-VCPKADVITWNMIISAYNKVGKFEESRRLF- 228
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+V M+++ + P+ T+V +L+AC+KL +R
Sbjct: 229 -LV-----------------------------MEDKQVLPTTVTLVLVLSACSKLKDLRT 258
Query: 240 GEWIHNFLVTNC-FELNTIVVTAIIDMYCKCGCPERALQVFNT----------------- 281
G+ +H++ V NC E N ++ A+IDMY CG + AL +F +
Sbjct: 259 GKKVHSY-VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT 317
Query: 282 --------------VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIA 327
+P+K W +M+ G + EA++LF +Q++N+KPD + ++
Sbjct: 318 NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVS 377
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
VLTAC H G + + ++ + KIK + + ++D + G +++AE + R M S
Sbjct: 378 VLTACAHLGAL-ELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREM-SQ 435
Query: 388 PDAIIWGSLLSACRKHGNIEMA 409
D W +++ +G+ E A
Sbjct: 436 RDKFTWTAMIVGLAVNGHGEKA 457
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 136/277 (49%), Gaps = 5/277 (1%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G+ +RRLFD++ N WN+MI GY R + + L+ EM + +KP +T L
Sbjct: 87 GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+ A+ G +H ++ + + N V TA++ MY CG + A VF+ PK +
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVI 206
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN ++ G E+ +LF ++ + P ++ + VL+AC+ + K + +
Sbjct: 207 TWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV 266
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
+ K++ ++ + M+D G ++ A + RSM ++ D I W +++S G I++
Sbjct: 267 -KNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM-NNRDIISWTTIVSGFTNLGEIDV 324
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
A+ ++ E D + M + Y S +F+EA+E
Sbjct: 325 ARNYFDKMPEKD---YVSWTAMIDGYIRSNRFKEALE 358
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/503 (36%), Positives = 303/503 (60%), Gaps = 2/503 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDI--NYAYLVFTQIKKPNLFIWNTI 58
+ +K+ HA ++ GLA D S +LAF + + +YA ++ I P +F N +
Sbjct: 44 ITQIKQAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNM 103
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IR F + PR++I L+ M + P + T + +A + R+GAQ+ V+K G
Sbjct: 104 IRCFVKGDLPRHSISLYSHMCRSFVAAPNKHTLTFVLQACSNAFAIREGAQVQTHVIKLG 163
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D F+ N +I++Y C + A+ +FDEV + DVV+WNSMI+G + G+I +++LF
Sbjct: 164 FVKDVFVRNALIHLYCTCCRVESAKQVFDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLF 223
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+M ++ +SW ++ISG V+N + ++AL+ F+E+ EQ ++P+E +VSLL A A+LG +
Sbjct: 224 VEMPEKDVISWGTIISGCVQNGELEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLE 283
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+ IH+ + F + + TA++DMY KCGC + + +F+ +P+K WN M+ GLA
Sbjct: 284 YGKRIHSIANSLRFPMTASLGTALVDMYAKCGCIDESRFLFDRMPEKDKWSWNVMICGLA 343
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G EA+ LF + P ++FI VLTAC+ +G V++ K +F LMT+TY I+P +
Sbjct: 344 THGLGQEALALFEKFLTQGFHPVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEM 403
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD L RAG + +A ++I MP+ PD ++W S+L +C+ HG IE+ ++ ++I+
Sbjct: 404 EHYGCMVDLLSRAGFVYDAVEMINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQ 463
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
+D + YV ++ ++A ++E+ + R LM E K G SLIE +G VH FVAG +
Sbjct: 464 MDPTHNGHYVQLARIFARLRKWEDVSKVRRLMAERNSNKIAGWSLIEAEGRVHRFVAGDK 523
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
H + E+Y +L +G+ I G
Sbjct: 524 EHERTTEIYKMLEIMGVRIAAAG 546
>gi|357487459|ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 525
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/504 (40%), Positives = 303/504 (60%), Gaps = 11/504 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAG---DINYAYLVFTQIKKPNLFIWNT 57
MK LK+ HA + TGL + A SR+LAFC+S + YA VF QI+ P + I+NT
Sbjct: 18 MKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRVFEQIQNPTVCIYNT 77
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+I+ F ++ ++A+ +F+ ML S ++P T P + KA G +HG K
Sbjct: 78 LIKAFLVNNKFKSALQVFVKML-QSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYSSKL 136
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GL FD ++ N+++ MY G + AR +FDE+ + +VV+W+ MI G AK G++D +R
Sbjct: 137 GLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPS-LNVVSWSVMISGYAKVGDVDSARLF 195
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD+ ++ W +MISGYV+N FKE+L LFR MQ +I P E VS+L+ACA LGA+
Sbjct: 196 FDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGAL 255
Query: 238 RQGEWIHNFL-VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
G WIH L L+ + T+++DMY KCG E A ++F+++ + + CWN+M+ G
Sbjct: 256 EIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISG 315
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
+AM+G A+KLF ++ +KPD I+FIAV TAC++SG + M Y I P
Sbjct: 316 MAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVP 375
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIR----SMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+HY C+VD L RAGL EEA +IR S + + W + LSAC HG ++A+ A
Sbjct: 376 KSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLAELA 435
Query: 413 AKQIIELDKNESCG-YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
A+++++LD + G YVL+SNLYAAS + +A R +MK K PGCS +E+DG +
Sbjct: 436 AEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSSVEIDGVIS 495
Query: 472 EFVAGGRLHPKAPEVYLLLNDLGL 495
EF+AG + HP+ E++ +L + +
Sbjct: 496 EFIAGEKTHPQMEEIHSVLKKMHM 519
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/499 (38%), Positives = 296/499 (59%), Gaps = 34/499 (6%)
Query: 4 LKKIHAHLIKTGLA-KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
++IHA I+ G+ +P ++ S ++YA+ +F+QI+ PN+F WNT+IRG+
Sbjct: 56 FRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGY 115
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++S P A+ L+ M V S I+P TYP L KA A+L R+G ++H ++ G E
Sbjct: 116 AESENPMPALELYRQMHV-SCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESL 174
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ NT+++MYA CG + + +LF+ M
Sbjct: 175 VFVQNTLVHMYA--------------------------------ACGHAESAHKLFELMA 202
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
RN V+WNS+I+GY N + EAL LFREM + ++P FTMVSLL+ACA+LGA+ G
Sbjct: 203 ERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRR 262
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
H ++V + N A++D+Y KCG +A +VF+ + +K + W S++ GLA+NG+
Sbjct: 263 AHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGF 322
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
EA++LF L+ L P I+F+ VL AC+H G V++ DYF M E Y I P I+HY
Sbjct: 323 GKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYG 382
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD LGRAGL+++A + I++MP P+A++W +LL AC HG++ + + A Q+++L+
Sbjct: 383 CMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPK 442
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
S YVL+SNLYA+ ++ + + R M ++K PG SL+E+ +HEFV G R HP+
Sbjct: 443 HSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQ 502
Query: 483 APEVYLLLNDLGLLIQEMG 501
E+Y+ L ++ L++ G
Sbjct: 503 TEEIYVKLAEITKLLKLEG 521
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/470 (38%), Positives = 296/470 (62%), Gaps = 4/470 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC--TSPAGDINYAYLVFTQIKKPNLFIWNTI 58
+ +K+I HL +G KDP AA++I++FC +S +++AY +F ++ + FIWNT+
Sbjct: 23 ISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYRLFLGLRHRSTFIWNTV 82
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IR F++ + PR AI+LF +ML ++ + P TY LFKA L G H + +K G
Sbjct: 83 IRAFAEKNEPRKAIMLFKNMLYSNFL-PNNYTYSFLFKACTDLNNLYLGLACHCQSIKLG 141
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
EF F+ N +++M+A G + AR +FD + + DV+ W ++I G + G++ R LF
Sbjct: 142 WEFYDFVQNGLVHMFAIFGCMDSARKLFD-LSSNRDVITWTALINGYVRAGQVLIGRELF 200
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
DKM RN+VSW++MI+GYVR F+EALELF M P+ +V +NACA LGA+
Sbjct: 201 DKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCAINACASLGALD 260
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
QG WIH ++ N +L+ ++ A+IDMY KCGC E A +F + + + + ++ GLA
Sbjct: 261 QGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELRNRDVHVYTCLISGLA 320
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G A++LF + S + P+ ++F++VL AC+ G V++ F M++ Y +P +
Sbjct: 321 NHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVDKGLRIFENMSKIYGDEPQV 380
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C+VD LGRAG LEEA+KL++ MP PD+ + G+LL+A R +G++E+ ++ + + +
Sbjct: 381 QHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNASRVYGDVELGEETVESLAQ 440
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
L + S +V++SN+YA++ +++E R M + K+ K PGCSLI+VDG
Sbjct: 441 LSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKVRKVPGCSLIKVDG 490
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/483 (37%), Positives = 297/483 (61%), Gaps = 6/483 (1%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+LKKIHAH++K L++ ++++ C G+ YA L+F + PN F++N +IR +
Sbjct: 29 ELKKIHAHIVKFSLSQSSFLVTKMVDVCNH-YGETEYANLLFKGVADPNAFLYNAMIRAY 87
Query: 63 SQSSTPRNAILLFIDMLVT----SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
+ AI ++ ML +PI P + T+P + K+ A L G Q+HG V K G
Sbjct: 88 KHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFG 147
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ + + N+++ MY C L +A +F+E+ TE D V+WN++I G + G++ +R +F
Sbjct: 148 QKSNTVVENSLVEMYVKCDSLDDAHRVFEEM-TERDAVSWNTLISGHVRLGQMRRARAIF 206
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
++M + SW +++SGY R + +ALE FR MQ I+P E ++VS+L CA+LGA+
Sbjct: 207 EEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALE 266
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+WIH + F N V A+I+MY KCG ++ ++F+ + ++ + W++M+ GLA
Sbjct: 267 LGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLA 326
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G EAI+LF +Q + ++P I+F+ +LTAC H+G +N+ YF M Y I+P +
Sbjct: 327 NHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGV 386
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C+V+ LG +G L++A +L++ MP PD+ IWGSLLS+CR HGN+++A A + ++E
Sbjct: 387 EHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLE 446
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ ++ YVL+SNLYA +++ R LM+ ++K PGCS IEVD V EF +G
Sbjct: 447 LEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDD 506
Query: 479 LHP 481
P
Sbjct: 507 SKP 509
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/505 (38%), Positives = 299/505 (59%), Gaps = 13/505 (2%)
Query: 1 MKDLKKIHAHLIKT---GLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWN 56
+++LKK H ++K+ +R+L C+ S G +YA VF IK P+L +N
Sbjct: 31 LRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFSYATNVFHMIKNPDLRAYN 90
Query: 57 TIIRGF----SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHG 112
+IR + S T L+ + I P LT+P L K Q G +H
Sbjct: 91 IMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQWLDGATGQAIHT 150
Query: 113 RVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID 172
+V+K G D ++ N++I +Y G LS AR +FDE+ DVV WNSM+IG + G +D
Sbjct: 151 QVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVT-DVVTWNSMVIGCLRNGGLD 209
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ---EQNIKPSEFTMVSLLN 229
+ LF KM RN ++WNS+I+G + KE+LELF EMQ + +KP + T+ S+L+
Sbjct: 210 MAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPDKITIASVLS 269
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
ACA+LGAI G+W+H +L N E + ++ TA+++MY KCG ++A ++F +P+K S
Sbjct: 270 ACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIFEEMPEKDASA 329
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
W M+ A++G +A F ++ + +KP++++F+ +L+AC HSG V Q + F +M
Sbjct: 330 WTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMK 389
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
Y I+P + HY+CMVD L RA L +E+E LIRSMP PD +WG+LL C+ HGN+E+
Sbjct: 390 RVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYVWGALLGGCQMHGNVELG 449
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE-PGCSLIEVDG 468
++ +I+L+ + YV ++YA + F+ A R +MKE +IEK+ PGCS+IE++G
Sbjct: 450 EKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKRIEKKIPGCSMIEING 509
Query: 469 EVHEFVAGGRLHPKAPEVYLLLNDL 493
EV EF AGG E+ L+LN L
Sbjct: 510 EVQEFSAGGSSELPMKELVLVLNGL 534
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 297/476 (62%), Gaps = 4/476 (0%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIK--KPNLFIWNTIIRGFSQSSTPRNAILLF 75
++ IA++ ++A G + A +F ++ + ++ W+ ++ + Q+ A++LF
Sbjct: 200 RNTIASNSMIAL-FGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLF 258
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
++M S + + S A +++ G +HG VK G+E + N +I++Y++
Sbjct: 259 VEM-KGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSS 317
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
CG + +AR +FD+ D+++WNSMI G +CG I ++ LF M ++ VSW++MISG
Sbjct: 318 CGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISG 377
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN 255
Y ++ F EAL LF+EMQ ++P E +VS ++AC L + G+WIH ++ N ++N
Sbjct: 378 YAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVN 437
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
I+ T +IDMY KCGC E AL+VF + +KG+S WN+++ GLAMNG +++ +F+ ++
Sbjct: 438 VILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKK 497
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLE 375
+ P+ I+F+ VL AC H G VN + YF M +KI+ +IKHY CMVD LGRAGLL+
Sbjct: 498 TGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLK 557
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYA 435
EAE+LI SMP PD WG+LL ACRKH + EM ++ +++I+L + +VL+SN+YA
Sbjct: 558 EAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYA 617
Query: 436 ASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLN 491
+ + +E R +M + + K PGCS+IE +G VHEF+AG + HP+ ++ +L+
Sbjct: 618 SKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLD 673
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 226/475 (47%), Gaps = 70/475 (14%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDI--NYAYLVFTQIKKPNLFIWNTII 59
+ K++ + I TGL DP AASR++ F + + +Y+ +F ++ PN F WNTI+
Sbjct: 17 RHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIM 76
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R + LL + + S +P TYP L + A +G QLH V G
Sbjct: 77 RAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGF 136
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D ++ NT++ +YA CG + AR +F+E D+V+WN+++ G + GE++E+ R+F+
Sbjct: 137 DGDVYVRNTLMNLYAVCGSVGSARRVFEESPV-LDLVSWNTLLAGYVQAGEVEEAERVFE 195
Query: 180 KMVSRNT---------------------------------VSWNSMISGYVRNVKFKEAL 206
M RNT VSW++M+S Y +N +EAL
Sbjct: 196 GMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEAL 255
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF------------------LV 248
LF EM+ + E +VS L+AC+++ + G W+H L
Sbjct: 256 VLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLY 315
Query: 249 TNCFE--------------LNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
++C E L+ I ++I Y +CG + A +F ++P+K + W++M+
Sbjct: 316 SSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMI 375
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G A + +EA+ LF +Q ++PD + ++ ++AC H ++ K ++ K+
Sbjct: 376 SGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRN-KL 434
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ ++ + ++D + G +E A ++ +M + W +++ +G++E +
Sbjct: 435 QVNVILSTTLIDMYMKCGCVENALEVFYAM-EEKGVSTWNAVILGLAMNGSVEQS 488
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/487 (39%), Positives = 302/487 (62%), Gaps = 5/487 (1%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+I ++K G KD + I+ S G+ A+ VF + +L WN++I G+ +
Sbjct: 175 EILGQVLKMGFDKDMYLYNGIIHMLVS-VGESGLAHKVFDEGCVRDLVSWNSLINGYVRR 233
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
PR A+ ++ M +T ++P +T + A AQL + G ++H + + GL +
Sbjct: 234 RQPREAMGIYQQM-ITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISL 292
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
N ++ MY CG L +++FD + + VV+W +MI+G AK G +D + +LF M +N
Sbjct: 293 VNALMDMYVKCGDLEAGKVLFDNMRKK-TVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKN 351
Query: 186 TVSWNSMISGYVR-NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
V+WN+MI V+ N+ F EALELFREMQ N+KP + TM+ L+AC++LGA+ G W H
Sbjct: 352 VVAWNAMIGSCVQANLSF-EALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTH 410
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
N++ + L+ + TA+IDMY KCG +ALQVFN +P++ W +++ GLA+ G N
Sbjct: 411 NYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVN 470
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+AI FS + S L PD I+F+ VLTAC H G V + + YF M + + P KHYSCM
Sbjct: 471 DAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCM 530
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
V+ LGRAGLLEEAE+LI++MP + DA++WG+L AC H N+ + ++AA ++++LD ++S
Sbjct: 531 VNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDS 590
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL++N+Y + ++EEA R +M E +EK PG S IEV+G ++EF+ + HP++
Sbjct: 591 GIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGIINEFIVRDKSHPQSE 650
Query: 485 EVYLLLN 491
++Y N
Sbjct: 651 QIYECFN 657
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 221/438 (50%), Gaps = 66/438 (15%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+I A +I TGL D A+SR+++FC S + +++Y + ++ PN+F WN +IRG
Sbjct: 69 LKQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAVIRGC 128
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+S P+ ++L+ ML + +P TY LFK A L L+ G ++ G+V+K G + D
Sbjct: 129 VESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQVLKMGFDKD 188
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+++N II+M + G A +FDE D+V+WNS
Sbjct: 189 MYLYNGIIHMLVSVGESGLAHKVFDEGCVR-DLVSWNS---------------------- 225
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+I+GYVR + +EA+ ++++M +++KP E TM+ +++ACA+L +++ G
Sbjct: 226 ---------LINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGRE 276
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH ++ + L +V A++DMY KCG E +F+ + KK + W +M+ G A NG
Sbjct: 277 IHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGL 336
Query: 303 EN-------------------------------EAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ EA++LF +Q SN+KPD ++ + L+A
Sbjct: 337 LDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSA 396
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C+ G ++ + + + + + + ++D + G + +A ++ MP +++
Sbjct: 397 CSQLGALDTGM-WTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRR-NSL 454
Query: 392 IWGSLLSACRKHGNIEMA 409
W +++ +GN+ A
Sbjct: 455 TWTAIIGGLALYGNVNDA 472
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/497 (36%), Positives = 309/497 (62%), Gaps = 11/497 (2%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTS---PAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K++HAH+I+ GL++ ++++ T P G +Y LVF Q+ PN F+W +IR
Sbjct: 58 IKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMG--SYPLLVFGQVNYPNPFLWTAMIR 115
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR-VVKQGL 119
G++ + + M + P T+ +LFKA G Q+H + ++ G
Sbjct: 116 GYALQGLLSESTNFYTRMR-RDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGF 174
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D ++ N++I +Y CGFL AR +FDE+ +E DVV+W +I+ AK G+++ + LFD
Sbjct: 175 ASDLYVGNSMIDLYVKCGFLGCARKVFDEM-SERDVVSWTELIVAYAKYGDMESASGLFD 233
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+ ++ V+W +M++GY +N + KEALE F++MQ+ ++ E T+ +++ACA+LGA++
Sbjct: 234 DLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKH 293
Query: 240 GEWIHNFLVTNCF--ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
WI + + F N +V +A+IDMY KCG P+ A +VF + ++ + ++SM+ G
Sbjct: 294 ANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGY 353
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AM+G + A++LF + + ++P+ ++FI +L+AC+H+G V Q + F M + + + PS
Sbjct: 354 AMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS 413
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
HY+CMVD LGRAG LEEA L+++MP +P+ +WG+LL ACR HGN ++A+ AA ++
Sbjct: 414 PDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELF 473
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE-VDGEVHEFVAG 476
+L+ N Y+L+SN+YA++ ++EE + R +++E +K PGCS E +GE+H+F AG
Sbjct: 474 KLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAG 533
Query: 477 GRLHPKAPEVYLLLNDL 493
HP++ E+ L L
Sbjct: 534 DTTHPRSSEIRQALKQL 550
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/498 (38%), Positives = 301/498 (60%), Gaps = 7/498 (1%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +IHA L++ GL +PI + L + G ++ + VF +PN+F ++ II
Sbjct: 63 LLQIHASLLRRGLYHNPILNFK-LQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHV 121
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
QS A + ML + ++P T+ S+ K+ + G LH + +K GL D
Sbjct: 122 QSRLFDRAFGYYSQML-SCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDL 176
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
++ ++ +YA G + AR +FD++ E +V+ +M+ +K GE+D++R LF+ M
Sbjct: 177 YVRTGLVDVYARGGDVVCARQLFDKM-PERSLVSLTTMLTCYSKMGELDKARSLFEGMKE 235
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ V WN MI GY ++ E+L+LFR M P+E T++++L+AC +LGA+ G WI
Sbjct: 236 RDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWI 295
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H+++ ++N V TA+IDMY KCG E A VF+ + K + WNSM+ G AM+G+
Sbjct: 296 HSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFS 355
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
A++LF + + KP I+FI +L+AC H G V + + +F LM + Y I+P I+HY C
Sbjct: 356 QHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGC 415
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MV+ LGRAG LEEA L+++M D ++WG+LL CR H NI++ ++ AK +++
Sbjct: 416 MVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLAN 475
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S YVL+SN+YAA+ +E + R LMKE IEKE GCS IEVD +VHEFVAG R HPK+
Sbjct: 476 SGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKS 535
Query: 484 PEVYLLLNDLGLLIQEMG 501
E+Y++LN++ ++ G
Sbjct: 536 KEIYVMLNEINSWLKARG 553
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/505 (37%), Positives = 303/505 (60%), Gaps = 37/505 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIA--ASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNT 57
M+ L++IHA L+ + I+ +I+ FC SP GDI+YA +F+QI++PN+F WN+
Sbjct: 70 MRVLRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNS 129
Query: 58 IIRGFSQSSTP-RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IRG SQS TP + ++LF M+ P T + KA + + +G Q+H V+K
Sbjct: 130 MIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLK 189
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G F+ ++ YA KC +I + +
Sbjct: 190 SGFGSSPFVETALVNFYA--------------------------------KCEDIVLASK 217
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD++ RN V+W++MISGY R EAL LFR+MQ+ + P E TMVS+++ACA GA
Sbjct: 218 VFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGA 277
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G+W+H ++ E + + TA+++MY KCGC ERA +VF+ +P K W+SM+ G
Sbjct: 278 LDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVG 337
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA+NG +A++ F ++ + +KP++++FI VL+AC HSG V++ + Y++ M E + I P
Sbjct: 338 LAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVP 396
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
S++ Y CMVD L RA L+E+A L+ +MP P+ +IW +LL C+K N++ ++ A+++
Sbjct: 397 SMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRL 456
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+EL+ + + Y+L+SNLYA+ Q+E+ + R MK + I+ PGCS IEVDG VHEFV G
Sbjct: 457 LELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMG 516
Query: 477 GRLHPKAPEVYLLLNDLGLLIQEMG 501
HP+A EV +L D+ + +G
Sbjct: 517 DWSHPEAMEVREILRDISKRVHAVG 541
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/505 (37%), Positives = 303/505 (60%), Gaps = 37/505 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIA--ASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNT 57
M+ L++IHA L+ + I+ +I+ FC SP GDI+YA +F+QI++PN+F WN+
Sbjct: 1 MRVLRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNS 60
Query: 58 IIRGFSQSSTP-RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IRG SQS TP + ++LF M+ P T + KA + + +G Q+H V+K
Sbjct: 61 MIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLK 120
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G F+ ++ YA KC +I + +
Sbjct: 121 SGFGSSPFVETALVNFYA--------------------------------KCEDIVLASK 148
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD++ RN V+W++MISGY R EAL LFR+MQ+ + P E TMVS+++ACA GA
Sbjct: 149 VFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGA 208
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G+W+H ++ E + + TA+++MY KCGC ERA +VF+ +P K W+SM+ G
Sbjct: 209 LDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVG 268
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA+NG +A++ F ++ + +KP++++FI VL+AC HSG V++ + Y++ M E + I P
Sbjct: 269 LAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVP 327
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
S++ Y CMVD L RA L+E+A L+ +MP P+ +IW +LL C+K N++ ++ A+++
Sbjct: 328 SMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRL 387
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+EL+ + + Y+L+SNLYA+ Q+E+ + R MK + I+ PGCS IEVDG VHEFV G
Sbjct: 388 LELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGIKAVPGCSSIEVDGLVHEFVMG 447
Query: 477 GRLHPKAPEVYLLLNDLGLLIQEMG 501
HP+A EV +L D+ + +G
Sbjct: 448 DWSHPEAMEVREILRDISKRVHAVG 472
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 303/488 (62%), Gaps = 3/488 (0%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+I H+I+ G D + I+ S G++ A +F + +L WN+II G+ +
Sbjct: 176 EILGHVIQLGFDSDLFVHNAIIHVLVS-CGELLAARKLFDESCVRDLVSWNSIINGYVRC 234
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
A L+ M + + P +T + A AQL G +LH + + GL +
Sbjct: 235 GLADEAFDLYYKMGELN-VMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPL 293
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
N ++ MY C + A+++F+ + T+ VV+W +M+IG AK G ++ + RLF++M ++
Sbjct: 294 ANALMDMYIKCKNIEAAKILFENM-TKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKD 352
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
V WN++I G+V+ + KEAL LF EMQ ++ P + T+V+ L+AC++LGA+ G W+H+
Sbjct: 353 VVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHH 412
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + +N + TA++DMY KCG ++A+QVF +P + W +++ GLA++G +
Sbjct: 413 YVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHA 472
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AI FS + S L PD I+FI VL+AC H G V+Q +DYF MT Y I P +KHYSC+V
Sbjct: 473 AISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLV 532
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAG LEEAE+LIRSMP +PDA++WG+L R HGN+ M ++AA +++ELD ++
Sbjct: 533 DLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGG 592
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL++N+Y + +E+A + R +M+E +EK PGCS IE++G V++F+ + HP++ +
Sbjct: 593 IYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEK 652
Query: 486 VYLLLNDL 493
+Y L L
Sbjct: 653 IYECLTRL 660
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 212/451 (47%), Gaps = 66/451 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +K+IHA +I TGL D A SR++AFC S +++Y + N F WN I
Sbjct: 67 MAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNXFSWNMAI 126
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+ +S P NA+LL+ +ML P TYP LFK A L+ ++ G V++ G
Sbjct: 127 RGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGF 186
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D F+HN II++ +CG L AR +FDE D+V+WNS+I G +CG D
Sbjct: 187 DSDLFVHNAIIHVLVSCGELLAARKLFDESCVR-DLVSWNSIINGYVRCGLAD------- 238
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
EA +L+ +M E N+ P E TM+ +++A A+L +
Sbjct: 239 ------------------------EAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLAL 274
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKC------------------------------ 269
G +H + L + A++DMY KC
Sbjct: 275 GRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAK 334
Query: 270 -GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G E A+++FN +P+K + WN+++ G EA+ LF +Q+S++ PD I+ +
Sbjct: 335 FGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNC 394
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC+ G ++ + + + + ++ + +VD + G +++A ++ MP
Sbjct: 395 LSACSQLGALDVGI-WMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR- 452
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
+++ W +++ HG A ++I +
Sbjct: 453 NSLTWTAIICGLALHGQPHAAISYFSEMISI 483
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 303/488 (62%), Gaps = 3/488 (0%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+I H+I+ G D + I+ S G++ A +F + +L WN+II G+ +
Sbjct: 176 EILGHVIQLGFDSDLFVHNAIIHVLVS-CGELLAARKLFDESCVRDLVSWNSIINGYVRC 234
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
A L+ M + + P +T + A AQL G +LH + + GL +
Sbjct: 235 GLADEAFDLYYKMGELN-VMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPL 293
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
N ++ MY C + A+++F+ + T+ VV+W +M+IG AK G ++ + RLF++M ++
Sbjct: 294 ANALMDMYIKCKNIEAAKILFENM-TKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKD 352
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
V WN++I G+V+ + KEAL LF EMQ ++ P + T+V+ L+AC++LGA+ G W+H+
Sbjct: 353 VVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHH 412
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + +N + TA++DMY KCG ++A+QVF +P + W +++ GLA++G +
Sbjct: 413 YVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHA 472
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AI FS + S L PD I+FI VL+AC H G V+Q +DYF MT Y I P +KHYSC+V
Sbjct: 473 AISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLV 532
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAG LEEAE+LIRSMP +PDA++WG+L R HGN+ M ++AA +++ELD ++
Sbjct: 533 DLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGG 592
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL++N+Y + +E+A + R +M+E +EK PGCS IE++G V++F+ + HP++ +
Sbjct: 593 IYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEK 652
Query: 486 VYLLLNDL 493
+Y L L
Sbjct: 653 IYECLTRL 660
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 213/451 (47%), Gaps = 66/451 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +K+IHA +I TGL D A SR++AFC S +++Y + N+F WN I
Sbjct: 67 MAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAANLNVFSWNMAI 126
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+ +S P NA+LL+ +ML P TYP LFK A L+ ++ G V++ G
Sbjct: 127 RGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGF 186
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D F+HN II++ +CG L AR +FDE D+V+WNS+I G +CG D
Sbjct: 187 DSDLFVHNAIIHVLVSCGELLAARKLFDESCVR-DLVSWNSIINGYVRCGLAD------- 238
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
EA +L+ +M E N+ P E TM+ +++A A+L +
Sbjct: 239 ------------------------EAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLAL 274
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKC------------------------------ 269
G +H + L + A++DMY KC
Sbjct: 275 GRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAK 334
Query: 270 -GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G E A+++FN +P+K + WN+++ G EA+ LF +Q+S++ PD I+ +
Sbjct: 335 FGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNC 394
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC+ G ++ + + + + ++ + +VD + G +++A ++ MP
Sbjct: 395 LSACSQLGALDVGI-WMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR- 452
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
+++ W +++ HG A ++I +
Sbjct: 453 NSLTWTAIICGLALHGQPHAAISYFSEMISI 483
>gi|225445484|ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 533
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/500 (38%), Positives = 298/500 (59%), Gaps = 9/500 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD--INYAYLVFTQIKKPNLFIWNTI 58
+ LK+IHA+L+++ L + P A ++L+ + ++A L+F + N+F++N++
Sbjct: 24 LSQLKQIHANLLQSHLPESPFAIGQLLSLAATSNNPSFFSHACLIFQNLSLRNIFMYNSM 83
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD--GAQLHGRVVK 116
IRG+ S +P AIL ++DML + T+P L KA LG + G +H VV
Sbjct: 84 IRGYVLSHSPTRAILCYLDML-NYGLLANNYTFPPLIKACTTLGSSSKLIGCLVHAHVVT 142
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G + D F+ + +I Y+ + AR +FD + DVV W +MI G K G+++ +R
Sbjct: 143 FGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNR-DVVLWTAMIDGYGKMGDVEHARI 201
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
LF+ M RN +SW+++++ Y R FKE L LFR MQE P+E +VS+L ACA LGA
Sbjct: 202 LFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVLTACAHLGA 261
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ QG W+H++ F+ N I+ TA++DMY KCGC E AL F +P K WN+M+ G
Sbjct: 262 LAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAGAWNAMISG 321
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
+AMNG ++++LF+ + S+ +P +F+AVLTAC H+ V + F M+ Y ++P
Sbjct: 322 VAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFEQMSSNYGVEP 381
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIEMAKQAA 413
++HY+C+VD + RAG+L EAEK I DA +WG++L ACR +GNIE+ +
Sbjct: 382 QLEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAMLGACRTYGNIEVGNRVW 441
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
K++ ++ + +VL NLY + EA R L+ E ++K+PGCS+IEVDG V EF
Sbjct: 442 KKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEAGMKKKPGCSIIEVDGTVEEF 501
Query: 474 VAGGRLHPKAPEVYLLLNDL 493
+AG H +AP++ L+ L
Sbjct: 502 LAGDLSHSQAPQICKTLDSL 521
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/502 (38%), Positives = 295/502 (58%), Gaps = 51/502 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSP-AGDINYAYLVFTQIKKPNLFIWNTII 59
M++L++IH ++KTGL D I AS++LAFC SP +G + YA VF +I +PN F+WNT+I
Sbjct: 31 MEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMI 90
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S S P A+LL+ ML S + T+P L KA + + + Q+H ++K G
Sbjct: 91 RGYSNSKEPEEALLLYHHMLYHS-VPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGF 149
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ + N+++ +Y+ K G+I +R LFD
Sbjct: 150 GSEIYTTNSLLNVYS--------------------------------KSGDIKSARLLFD 177
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
++ R+T EAL LF MQ IK +VS L ACA LG + Q
Sbjct: 178 QVDQRDT-----------------EALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQ 220
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+WIH ++ + E++ I+ +IDMY KCG E A++VF + +KG+S W +M+ G A+
Sbjct: 221 GKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAI 280
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G EA++ F +Q++ ++P+ ++F +LTAC+H+G V++AK F M + KPSI+
Sbjct: 281 HGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIE 340
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAGLL+EAE+LI +MP P+A IWG+LL+AC HGN+E+ KQ K +I++
Sbjct: 341 HYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQV 400
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D Y+ +++++AA+ ++ +A R MKE + K PGCS+I V+G HEF+AG
Sbjct: 401 DPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEFLAGDES 460
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+ E+ +L + ++E G
Sbjct: 461 HPQIKEIDHMLEQIVERLREEG 482
>gi|147825156|emb|CAN75501.1| hypothetical protein VITISV_034156 [Vitis vinifera]
Length = 532
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/496 (37%), Positives = 301/496 (60%), Gaps = 6/496 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M + K+I A I +GL++ ASR+L+F S GDI+++Y +F QI P + WN+II
Sbjct: 18 MSEFKQIQAFFITSGLSQHHPFASRLLSFSAISSWGDIDHSYRIFLQIPSPTISNWNSII 77
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGFS+ P ++ +F+ ML + P LTYP + KA A+L R +H R+ K+GL
Sbjct: 78 RGFSKGKNPNPSVSVFVKMLRFG-VCPDHLTYPFVAKAVARLSELRLALAVHCRIAKEGL 136
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
FD+FI N++I+MY +CG + AR +FDE+ + V+WN+M+ G AKCG++D + ++F
Sbjct: 137 WFDRFIANSLIHMYGSCGDIGSARKVFDEMLIR-NSVSWNAMLDGYAKCGDLDSAHQVFX 195
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M R+ VSW+SMI G V+ ++ AL +F M+ K + TMVS+L ACA LGA+
Sbjct: 196 SMPDRDVVSWSSMIDGCVKGGEYGVALAIFERMRVVGPKANXVTMVSVLCACAHLGALEX 255
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGL 297
G +H ++V N ++ T+++DMY KCG E A+ VF VP + + WN+++ GL
Sbjct: 256 GRXMHQYMVDNTMRFTLVLRTSLMDMYAKCGAIEEAIAVFRGVPMDQTDVLMWNTIIGGL 315
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A +G E+++LF +Q + PD I+++ + +AC H G V++A +F + + + P
Sbjct: 316 ATHGLVXESLELFKEMQVLGIVPDEITYLCLFSACAHGGLVHEAWHFFKSLGKQGMV-PK 374
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
+HY+CMVD L RAG L EA I MP +P A + G+LL+ C H ++A++ +++I
Sbjct: 375 SEHYACMVDVLSRAGQLAEAYDFIAQMPMEPTASMLGALLNGCMNHRRFDLAERVGRKLI 434
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
EL+ + Y+ +SN+YA ++ A R M+ ++K PG S +EV G +H F+A
Sbjct: 435 ELEPDHDGRYIGLSNVYAGVKLWDNARMMREAMERRGVKKSPGFSFVEVLGTLHRFIAHD 494
Query: 478 RLHPKAPEVYLLLNDL 493
+ H ++Y++LN +
Sbjct: 495 KTHNDLEKIYMMLNTI 510
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 201/544 (36%), Positives = 320/544 (58%), Gaps = 45/544 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTII 59
+K+LK++HA++ KTGL DPI A ++L D ++YA +F P++F+ NT+I
Sbjct: 18 LKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLI 77
Query: 60 RGFSQSSTPRNAILLFIDML--VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
RG ++S TP+N+++ F++M +T+P+ ++ L KA A G QLH + +
Sbjct: 78 RGLAESDTPQNSLITFVEMRRRLTAPLDS--FSFAFLLKAAASYRSLESGIQLHCQAIVH 135
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNS----------------- 160
GL+ F+ T++ MY+ CGF++ A+ +F+E+ E +VVAWN+
Sbjct: 136 GLDTHLFVGTTLVSMYSECGFVAFAKKVFEEM-FEPNVVAWNAVVTACFRCGDVKGADMM 194
Query: 161 --------------MIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEAL 206
M+ G K GE++ +R+LF +M ++ VSW++MI G+ N F EA
Sbjct: 195 FNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAF 254
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
FRE+Q+ ++P+E ++ L+ACA GAI G+ +H F+ + F V A++D Y
Sbjct: 255 GFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTY 314
Query: 267 CKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
KCG A VF +P K+ + W SM+ GLAM+GY EAI+LF ++ S ++PD I+F
Sbjct: 315 SKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAF 374
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
I++L AC+H+G + + +YF M + Y I+P+I+HY CMVD GRAG L++A + I MP
Sbjct: 375 ISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMP 434
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
P AIIW +LL AC HGN+++A++ +++ ELD N S +VL+SN+YA + ++++
Sbjct: 435 VLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAA 494
Query: 446 ERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG-------GRLHPKAPEVYLLLNDLGLLIQ 498
R M + ++ K PG S+IEVD ++ FVAG + K E+ L L G I
Sbjct: 495 VRRSMTDQRMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIP 554
Query: 499 EMGS 502
E+GS
Sbjct: 555 EVGS 558
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/543 (36%), Positives = 310/543 (57%), Gaps = 46/543 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKP-----NL 52
+ LK++H + K GL + P ++++ A SP ++YA F K+ L
Sbjct: 38 LNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPES-LDYARKAFELFKEDVRSDDAL 96
Query: 53 FIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHG 112
F+ N++IRG+S + R AILL++ MLV + P T+P + ++ +G Q+HG
Sbjct: 97 FMLNSLIRGYSSAGLGREAILLYVRMLVLG-VTPNHYTFPFVLSGCTKIAAFCEGIQVHG 155
Query: 113 RVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA------ 166
VVK GLE D FI N +I+ YA CG + +F+ + +E +VV+W S+I G A
Sbjct: 156 SVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGM-SERNVVSWTSLICGYARGDRPK 214
Query: 167 -----------------------KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
KCG ID ++RLFD+ V RN V +N+++S Y R +
Sbjct: 215 EAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAR 274
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKL-----GAIRQGEWIHNFLVTNCFELNTIV 258
EAL + EM +Q +P TM+S ++A A+L G + G W+H ++ N + +
Sbjct: 275 EALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRL 334
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
TA++DM+ +CG P+ A+QVFN + ++ +S W + + +AM G A LF+ + +
Sbjct: 335 NTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGV 394
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
KPD + F+ VLTAC+H G+V Q F+LM E + I P I+HY CMVD LGRAGLL EA
Sbjct: 395 KPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAF 453
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASY 438
LI+SMP +P+ ++WGSLL+ACR H N+EMA AA++I EL + +VL+SN+YA++
Sbjct: 454 DLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAG 513
Query: 439 QFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQ 498
++ + RL ++E + K PG S ++V+G +HEF +G HP+ + L+L ++
Sbjct: 514 KWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFS 573
Query: 499 EMG 501
+ G
Sbjct: 574 DAG 576
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/479 (40%), Positives = 301/479 (62%), Gaps = 13/479 (2%)
Query: 34 AGDINYAYLVFTQIKKPNL--FIWNTIIRGFSQ--SSTPRNAILLFIDMLVTSPIQPQRL 89
A I YA +F I+ L F+WN IIR SS R++ + + + P
Sbjct: 5 AAIIAYANPIF-HIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFH 63
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T+P L ++ G + H +++ GL+ D F+ +++ MY++CG L A+ +FD+
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
++ D+ AWNS++ AK G ID++R+LFD+M RN +SW+ +I+GYV K+KEAL+LF
Sbjct: 124 GSK-DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLF 182
Query: 210 REMQ-----EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
REMQ E ++P+EFTM ++L+AC +LGA+ QG+W+H ++ E++ ++ TA+ID
Sbjct: 183 REMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALID 242
Query: 265 MYCKCGCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS-NLKPDY 322
MY KCG ERA +VFN + KK + +++M+ LAM G +E +LFS + +S N+ P+
Sbjct: 243 MYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNS 302
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
++F+ +L AC H G +N+ K YF +M E + I PSI+HY CMVD GR+GL++EAE I
Sbjct: 303 VTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA 362
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEE 442
SMP +PD +IWGSLLS R G+I+ + A K++IELD S YVL+SN+YA + ++ E
Sbjct: 363 SMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME 422
Query: 443 AMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R M+ I K PGCS +EV+G VHEFV G ++ +Y +L+++ ++E G
Sbjct: 423 VKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAG 481
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 139/335 (41%), Gaps = 70/335 (20%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++ HA ++ GL KDP + +L +S GD+ A VF +L WN+++ +++
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSS-CGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 65 SS------------TPRN-------------------AILLFIDMLVTSP----IQPQRL 89
+ RN A+ LF +M + P ++P
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T ++ A +LG G +H + K +E D + +I MYA CG L A+ +F+ +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
++ DV A+++MI LA G DE +LF +M + +
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD------------------------ 296
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYC 267
NI P+ T V +L AC G I +G+ ++ F + + ++D+Y
Sbjct: 297 ------NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE-FGITPSIQHYGCMVDLYG 349
Query: 268 KCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
+ G + A ++P + + W S++ G M G
Sbjct: 350 RSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 203/570 (35%), Positives = 315/570 (55%), Gaps = 71/570 (12%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTIIR 60
KDL+++HAHL+KT DPI +L D I+YA +F I KP +N +IR
Sbjct: 35 KDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIR 94
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G + +P NA+LLF M S +Q + T+ S+ KA +++ R+G Q+H ++K G +
Sbjct: 95 GLAFKRSPDNALLLFKKMHEKS-VQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFK 153
Query: 121 FDQFIH-------------------------------NTIIYMYANCGFLSEARLMFD-- 147
++F+ N+++ Y G E +F
Sbjct: 154 SNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKI 213
Query: 148 -EVDTEFDVVAW-----------------------------------NSMIIGLAKCGEI 171
E+ EFD V S+I AKCG++
Sbjct: 214 LELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQV 273
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
D +R+LFD+M R+ V+W++MISGY + + KEAL LF EMQ+ N+ P+E TMVS+L +C
Sbjct: 274 DTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSC 333
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A LGA G+W+H ++ +L + T +ID Y KCG +R+++VF + K + W
Sbjct: 334 AMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWT 393
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+++ GLA NG A++ FS + +++KP+ ++FI VL+AC+H+ V+Q + F M
Sbjct: 394 ALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRD 453
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ I+P I+HY CMVD LGRAG LEEA + I +MP P+A++W +LL++CR H NIEMA++
Sbjct: 454 FDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEK 513
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
+ + I L+ S Y+L+SN YA + E+A+ R L+KE +I+K PGCSLIE+DG VH
Sbjct: 514 SLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVH 573
Query: 472 EFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
EF + H + E++ L+ + I+ +G
Sbjct: 574 EFFSEDGEHKHSKEIHDALDKMMKQIKRLG 603
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 181/467 (38%), Positives = 283/467 (60%), Gaps = 6/467 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++Y+ +F + + P++F W II G + A+ + ML T ++P T+ S+
Sbjct: 23 GRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQML-TQGVEPNAFTFSSI 81
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
K L G LH + VK G + D ++ ++ +YA G + A+ +FD + E
Sbjct: 82 LK----LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTM-PEKS 136
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+V+ +M+ AK GE+D +R LFD M R+ V WN MI GY +N EAL LFR M +
Sbjct: 137 LVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK 196
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
KP+E T++S+L+AC +LGA+ G W+H+++ N + N V TA++DMY KCG E
Sbjct: 197 AKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLED 256
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VF+ + K + WNSM+ G AM G+ EA++LF + L P I+FI +L+AC H
Sbjct: 257 ARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGH 316
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
SG V + D F M + Y I+P I+HY CMV+ LGRAG +E+A +L+++M +PD ++WG
Sbjct: 317 SGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWG 376
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
+LL ACR HG I + ++ + +++ + S Y+L+SN+YAA ++ R +MK+
Sbjct: 377 TLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSG 436
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++KEPGCS IEV+ +VHEF+AGG HPK E+Y++L ++ ++ G
Sbjct: 437 VKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHG 483
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 146/321 (45%), Gaps = 66/321 (20%)
Query: 30 CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRL 89
C + G+++ A ++F +++ + WN +I G++Q+ P A++LF ML + +P +
Sbjct: 146 CYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRML-KAKAKPNEV 204
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T S+ A QLG G +H + G++F+ + ++ MY+ CG L +ARL+FD++
Sbjct: 205 TVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKI 264
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
D + DVVAWNSMI+G A G F +EAL+LF
Sbjct: 265 DDK-DVVAWNSMIVGYAMXG--------FS-----------------------QEALQLF 292
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
+ M + P+ T + +L+AC G + +G I N
Sbjct: 293 KSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN------------------------ 328
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
+ + PK + + MV L G+ +A +L +++ N++PD + + +L
Sbjct: 329 ----KMKDEYGIEPK--IEHYGCMVNLLGRAGHVEQAYEL---VKNMNIEPDPVLWGTLL 379
Query: 330 TACNHSGKVNQAKDYFTLMTE 350
AC GK+ + L+ +
Sbjct: 380 GACRLHGKIALGEKIVELLVD 400
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 225
A G +D S LF + + + W ++I G+ ++AL + +M Q ++P+ FT
Sbjct: 20 ASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFS 79
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
S+L C I G+ +H+ V F+ + V T ++D+Y + G A Q+F+T+P+K
Sbjct: 80 SILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEK 135
Query: 286 GL-------------------------------SCWNSMVFGLAMNGYENEAIKLFSGLQ 314
L CWN M+ G NG NEA+ LF +
Sbjct: 136 SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRML 195
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
+ KP+ ++ ++VL+AC G + + + E I+ ++ + +VD + G L
Sbjct: 196 KAKAKPNEVTVLSVLSACGQLGALESGR-WVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254
Query: 375 EEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
E+A +L+ D D + W S++ G + A Q K + +
Sbjct: 255 EDA-RLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRM 298
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/503 (38%), Positives = 303/503 (60%), Gaps = 10/503 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M +LKK HA +IK L++ ++++ C D++YA +F ++ PN +++N +IR
Sbjct: 1 MAELKKNHALVIKYALSQSNFLVTKMIDVCDRNE-DMDYASFLFKEVIDPNAYLYNAMIR 59
Query: 61 GFSQSSTPRNAILLFIDML------VTSP--IQPQRLTYPSLFKAYAQLGLARDGAQLHG 112
+ +S I + ML TS I P T+P + KA A+LGL G Q+H
Sbjct: 60 ACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGLHNLGKQVHA 119
Query: 113 RVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID 172
+ K G + N +I MY C L +A +FDE+ E ++WN +I G + G++
Sbjct: 120 QFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMH-ERGAISWNGIISGHVRLGQMR 178
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
+R LFD+M +R VSW ++ISGY R + +AL++FREMQ I+P E +++S+L ACA
Sbjct: 179 RARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACA 238
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
KLGA+ G+WIH F N T + A+I+MY KCGC ++A Q+F+ + + + W++
Sbjct: 239 KLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWST 298
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
M+ GLA +G EAI +F ++ +N+KP+ I+F+ +L+AC H+G + YF M + +
Sbjct: 299 MIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDF 358
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
I+P I+HY +VD LGRAG L +A ++ MP PD+ IWGSLLS+CR H NIE+A A
Sbjct: 359 HIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIA 418
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
+ + EL+ +++ YVL+SN+YA ++++ R L++ +++K PGCSLIEV+ E
Sbjct: 419 MEHLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNNVAQE 478
Query: 473 FVAGGRLHPKAPEVYLLLNDLGL 495
FV+G P + E++ LL L
Sbjct: 479 FVSGDDSKPYSKEIFWLLELLAF 501
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/527 (37%), Positives = 307/527 (58%), Gaps = 35/527 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ LK +HA +I GL + + ++++FC AGD+ YA +F QI +PN F++N++I
Sbjct: 1 MRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S S P +A+LLF M + S + P T P + KA + +HG +K G+
Sbjct: 61 RGYSNSDDPIDAVLLFRRM-ICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGI 119
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVD----------------------------- 150
F+ N +I +Y CG + AR +FD++
Sbjct: 120 GSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLIDIIVRNALVDMYAKCGNLHSAQAI 179
Query: 151 ----TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEAL 206
E +VV+W SMI A+ G I+ +R++FD+M +N VSWNSMIS Y+R +++EAL
Sbjct: 180 FDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREAL 239
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
+LF +M+ + P E T+VS+L AC++LG + G+ IHN++++N + ++IDMY
Sbjct: 240 DLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMY 299
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG AL +F +P K L WN ++ LA++G EAIKLF +Q+ PD I+
Sbjct: 300 AKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLT 359
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+L+AC+HSG V+ YF M Y++ I+HY+CMVD LGR GLL EA +LI MP
Sbjct: 360 GLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPM 419
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
PD ++WG+LL ACR HGN+E+ KQ KQ++EL+ + YVL+SN+Y + ++E+ +
Sbjct: 420 KPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKI 479
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
R LM + I+K S IE+DG ++EF+ + H + +Y +L+ L
Sbjct: 480 RKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQL 526
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/530 (36%), Positives = 315/530 (59%), Gaps = 40/530 (7%)
Query: 1 MKDLKKIHAHLIKTGLAK-DP-IAASRILAFCTSPAGDINYAYLVFTQ-IKKPNLFIWNT 57
M+ L +I A +I + + DP I A + + +S G++ ++ L+F + PN+F +N
Sbjct: 37 MRQLFEIQAQIIASPIPSIDPNIIAVKFIGV-SSSHGNLRHSVLIFNHFLSFPNIFAYNA 95
Query: 58 IIRGFSQSSTPRNAILLFIDMLV--TSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
+++ FSQ + I F + LV +P P T+ S+ KA A L +G ++H V
Sbjct: 96 LLKAFSQHNAWHTTISYFNNQLVLPNAP-NPDEYTFTSVLKACAGLAQVLEGQKVHCFVT 154
Query: 116 KQGLEFDQFIHNTIIYMY----ANC---------------------------GFLSEARL 144
K G E + F+ N+++ +Y NC G + +AR+
Sbjct: 155 KYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARM 214
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+FD + E ++V+W++MI G A+ G ++E+R+LF+ M RN VSWN+MI+GY +N K+ +
Sbjct: 215 VFDGM-MEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYAD 273
Query: 205 ALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
A+ELFR+MQ E + P++ T+VS+L+ACA LGA+ G+WIH F+ N E+ + A+
Sbjct: 274 AIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALA 333
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY KCGC A VF+ + ++ + W+ ++ GLAM GY NEA F+ + L+P+ I
Sbjct: 334 DMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDI 393
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
SF+ +LTAC H+G V++ +YF +M + Y I P I+HY C+VD L RAG L++AE LI S
Sbjct: 394 SFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINS 453
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
MP P+ I+WG+LL CR + + E ++ +I+ELD N S V ++N+YA+ + ++A
Sbjct: 454 MPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDA 513
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
RL M++ K K PGCS IE++ V+EF G HP++ +Y ++ +L
Sbjct: 514 ASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIREL 563
>gi|449452160|ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cucumis sativus]
Length = 532
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 195/504 (38%), Positives = 302/504 (59%), Gaps = 8/504 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+ HA ++K+GL SR+L FC S G +++A+ +F I+ P + I+NT+I
Sbjct: 18 MNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMI 77
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ NAI +F + + I P T P + KA A++ G +H +K G
Sbjct: 78 KALLLRGEFLNAIAVF-SAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGS 136
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
++F+ N+++ MY + + AR +FDE+ E V+W MI G A G++D +R LFD
Sbjct: 137 AVNEFVGNSLLVMYRSFDNMRSARQVFDEM-PELSAVSWTVMIYGYANMGDVDTARELFD 195
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
++T W +MISGYV+N FKE L +FR MQ ++P E +V++L+ACA +GA+
Sbjct: 196 MATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDT 255
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G WIH +L L V T +IDMY KCG + A +FN + ++ CWN+M+ G+AM
Sbjct: 256 GIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAM 315
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G AIKLF ++ + +KPD I+FIAVL AC++SG V++ + M+ +KI+P +
Sbjct: 316 DGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRIWNRMSTVHKIEPKSE 375
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPS----DPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
HY C++D L R G EEAE +I+ +P +A+ W + LSAC KHG + A+ AA++
Sbjct: 376 HYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAER 435
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+ +L+++ S YVL+SN+YAA + E+A R +MK +EK PGCS I+V+G V+EF+A
Sbjct: 436 LFQLERH-SGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIA 494
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQE 499
G + H ++L+L +L I E
Sbjct: 495 GEKTHRHIDNIHLVLEELNKQIVE 518
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 308/505 (60%), Gaps = 15/505 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K LK+IH +I G ++ ++L+F + +G++ A+ VF +I+ P+ +WN +IR
Sbjct: 31 IKKLKQIHTQIIVNGFSQKNFLLVKLLSFYIT-SGNLLNAHKVFERIENPSTTVWNQMIR 89
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G SQS TP + L+ + +V + +P TY L A+ L R+G Q+HGRVV G
Sbjct: 90 GHSQSETPHKLVELY-NRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYC 148
Query: 121 FDQFIHNTIIYMYANCGF---LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
+ F+ +++ +YA G + +AR +FDE+ + ++V+WNS++ G +CG++D +RR+
Sbjct: 149 TNVFVRTSLVNLYAIAGGYDGVRKARRVFDEI-VDRNIVSWNSLLAGYVRCGDVDGARRI 207
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD+M RN VSW +MI+G + + K+AL LF EM+ +K + +V+ L+ACA+LG +
Sbjct: 208 FDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDL 267
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAI----IDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ G WIH+++ N ++ ++ I MY CG ++A +VF + ++ W SM
Sbjct: 268 KLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSM 327
Query: 294 VFGLAMNGYENEAIKLFSGLQ---SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
+ G A G+ EA+ +F +Q + +PD I+FI VL AC+H+G V+Q + +F M +
Sbjct: 328 ITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNK 387
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
+ I P I+HY CMVD L RAG L+EA +LI SMP P+ +WG+LL CR H N E+A
Sbjct: 388 KWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELAS 447
Query: 411 QAAKQI-IELDKNESCGY-VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
A+++ +EL +++ GY VL+SN+YA + ++++ R M E+ + K G S ++++G
Sbjct: 448 HVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQING 507
Query: 469 EVHEFVAGGRLHPKAPEVYLLLNDL 493
VH+FVAG H A VY +L+ +
Sbjct: 508 VVHDFVAGDWTHKHASSVYEMLSKI 532
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 368 bits (944), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 183/505 (36%), Positives = 300/505 (59%), Gaps = 15/505 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++ A LI G A+ A ++L FCT +++YA +F ++ PN++++ +I
Sbjct: 68 LNHLKQLQAFLITLGHAQTHFYAFKLLRFCTLALSNLSYARFIFDHVESPNVYLYTAMIT 127
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++ S +A+LL+ +M+ P YP + K+ Q+ +H +V++ G E
Sbjct: 128 AYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGSARMVHCQVLRSGFE 187
Query: 121 FDQFIHNTIIYMYANCGFLSE---ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
+ ++ Y F S+ ARL+FDE+ TE +VV+W +MI G + G+I + L
Sbjct: 188 QYPVVQTALLDAYLR--FWSDVESARLLFDEM-TERNVVSWTAMISGYTRLGQIGNAVLL 244
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-------QEQNIKPSEFTMVSLLNA 230
F++M R+ SWN++I+GY +N F EAL LFR M Q +P++ T V L+A
Sbjct: 245 FEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQVTAVCSLSA 304
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
C G +R G+WIH ++ N L++ V A++DMY KCGC + A +VF+ ++ L+ W
Sbjct: 305 CGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTLERSLTSW 364
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQS--SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
NSM+ LA++G AI +F + + S +KPD ++FI +L AC H G V + YF LM
Sbjct: 365 NSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYFELM 424
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
T+ Y I+P I+HY C+VD LGRAG EEA +++R M +PD +IWGSLL+ C+ HG+ ++
Sbjct: 425 TQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDL 484
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
A+ + K++I++D N ++++N+Y +++E + R ++KE K PGCS IE+D
Sbjct: 485 AEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPGCSWIEIDN 544
Query: 469 EVHEFVAGGRLHPKAPEVYLLLNDL 493
+VH+F + + HP+ E+Y L L
Sbjct: 545 QVHQFYSVDKTHPRTEEIYNTLESL 569
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 186/498 (37%), Positives = 301/498 (60%), Gaps = 7/498 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDIN-YAYLVFTQIKKPNLFIWNTII 59
+ +K++HAH+ + GL + +++L T ++ Y LVF Q++ PN F+W +I
Sbjct: 52 INQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALI 111
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR-VVKQG 118
RG++ ++LL+ M I P T+ +L KA + G Q+H + ++ G
Sbjct: 112 RGYALQGPFMESVLLYNSMR-RQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGG 170
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D ++ NT+I MY CG L +FDE+ + DV++W S+I+ AK G ++ + LF
Sbjct: 171 FGSDLYVGNTLIDMYVKCGCLGCGHRVFDEM-LDRDVISWTSLIVAYAKVGNMEAASELF 229
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D + ++ V+W +M++GY +N + +EALE+F MQ +K E T+V +++ACA+LGA +
Sbjct: 230 DGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAK 289
Query: 239 QGEWIHNFLVTNCF--ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
W+ + + F N +V +A+IDMY KCG E A +VF + ++ + ++SM+ G
Sbjct: 290 YANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVG 349
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
AM+G A++LF + + +KP+ ++FI VLTAC+H+G V Q + F +M E + + P
Sbjct: 350 FAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAP 409
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
S HY+CMVD LGRAG LEEA L++ MP +P +WG+LL ACR HGN +MA+ AA +
Sbjct: 410 SEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHL 469
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE-VDGEVHEFVA 475
EL+ N Y+L+SN+YA++ ++++ + R LM+ ++K PGCS +E G +HEF A
Sbjct: 470 FELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFA 529
Query: 476 GGRLHPKAPEVYLLLNDL 493
G HPK+ E+ L DL
Sbjct: 530 GDMSHPKSREIKQALEDL 547
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 292/505 (57%), Gaps = 41/505 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASR-ILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ +K++HA ++ G D A I A G +A LVF +I P+ F++NT+I
Sbjct: 21 LRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFMYNTLI 80
Query: 60 RGFSQSSTPRNAILLFIDMLVTSP------IQPQRLTYPSLFKAYAQLGLARDGAQLHGR 113
RG + S PR+A+ ++ M S ++P + T+P + +A A +G GAQ+H
Sbjct: 81 RGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQVHAH 140
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI-- 171
VVK G E D F+ N +I M+A G L A +FD E D VAW++MI G A+ G+I
Sbjct: 141 VVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEARE-DAVAWSAMISGFARRGDIGA 199
Query: 172 -----DES------------------------RRLFDKMVSRNTVSWNSMISGYVRNVKF 202
DES R LFD R+ VSWN+MISGYVR
Sbjct: 200 ARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSR 259
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN--TIVVT 260
K+A+ELF +MQ KP TM+SLL+ACA G + G +H FL + T +
Sbjct: 260 KQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRFSRIGPTTALGN 319
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
A+IDMY KCG AL+VF + K +S WNS++ GLA++G+ E+I +F + N+KP
Sbjct: 320 ALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKP 379
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
D I+F+AVL AC+H G V++ +YF+LM + Y+I+P+IKHY CMVD L R GLL+EA +
Sbjct: 380 DEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEF 439
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQF 440
I +M +P+ +IW +LL ACR HG IE+A+ A +++++ + S +VL+SN+YA+ ++
Sbjct: 440 IGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNIYASVGEW 499
Query: 441 EEAMEERLLMKEVKIEKEPGCSLIE 465
+ R LM + + KE G ++I+
Sbjct: 500 PGSENMRKLMDDSGVNKEAGRAVID 524
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 183/488 (37%), Positives = 303/488 (62%), Gaps = 2/488 (0%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+ KKI+A +I GL++ ++++ FC D++YA +F Q+ PN+F++N+IIR +
Sbjct: 25 EWKKINASIIIHGLSQSSFMVTKMVDFCDKIE-DMDYATRLFNQVSNPNVFLYNSIIRAY 83
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ +S + I ++ +L S P R T+P +FK+ A LG G Q+HG + K G F
Sbjct: 84 THNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFH 143
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
N +I MY L +A +FDE+ E DV++WNS++ G A+ G++ +++ LF M+
Sbjct: 144 VVTENALIDMYMKFDDLVDAHKVFDEM-YERDVISWNSLLSGYARLGQMKKAKGLFHLML 202
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+ VSW +MISGY + EA++ FREMQ I+P E +++S+L +CA+LG++ G+W
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKW 262
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH + F T V A+I+MY KCG +A+Q+F + K + W++M+ G A +G
Sbjct: 263 IHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGN 322
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+ AI+ F+ +Q + +KP+ I+F+ +L+AC+H G + YF +M + Y+I+P I+HY
Sbjct: 323 AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYG 382
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C++D L RAG LE A ++ ++MP PD+ IWGSLLS+CR GN+++A A ++EL+
Sbjct: 383 CLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPE 442
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+ YVL++N+YA ++E+ R +++ ++K PG SLIEV+ V EFV+G P
Sbjct: 443 DMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPF 502
Query: 483 APEVYLLL 490
E+ ++L
Sbjct: 503 WTEISIVL 510
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 367 bits (942), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 292/505 (57%), Gaps = 41/505 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASR-ILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ +K++HA ++ G D A I A G +A LVF +I P+ F++NT+I
Sbjct: 21 LRQIKQVHALMVLQGFLSDSSALRELIFASAVGVRGGTAHARLVFDRIPHPDRFMYNTLI 80
Query: 60 RGFSQSSTPRNAILLFIDMLVTSP------IQPQRLTYPSLFKAYAQLGLARDGAQLHGR 113
RG + S PR+A+ ++ M S ++P + T+P + +A A +G GAQ+H
Sbjct: 81 RGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQVHAH 140
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI-- 171
VVK G E D F+ N +I M+A G L A +FD E D VAW++MI G A+ G+I
Sbjct: 141 VVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEARE-DAVAWSAMISGFARRGDIGA 199
Query: 172 -----DES------------------------RRLFDKMVSRNTVSWNSMISGYVRNVKF 202
DES R LFD R+ VSWN+MISGYVR
Sbjct: 200 ARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSR 259
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN--TIVVT 260
K+A+ELF +MQ KP TM+SLL+ACA G + G +H FL + T +
Sbjct: 260 KQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRFSRIGPTTALGN 319
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
A+IDMY KCG AL+VF + K +S WNS++ GLA++G+ E+I +F + N+KP
Sbjct: 320 ALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKP 379
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
D I+F+AVL AC+H G V++ +YF+LM + Y+I+P+IKHY CMVD L R GLL+EA +
Sbjct: 380 DEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEF 439
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQF 440
I +M +P+ +IW +LL ACR HG IE+A+ A +++++ + S +VL+SN+YA+ ++
Sbjct: 440 IGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNIYASVGEW 499
Query: 441 EEAMEERLLMKEVKIEKEPGCSLIE 465
+ R LM + + KE G ++I+
Sbjct: 500 PGSENMRKLMDDSGVNKEAGRAVID 524
>gi|222624265|gb|EEE58397.1| hypothetical protein OsJ_09562 [Oryza sativa Japonica Group]
Length = 523
Score = 367 bits (941), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 196/483 (40%), Positives = 294/483 (60%), Gaps = 42/483 (8%)
Query: 15 GLAKDPIAASRILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAI 72
G DP + R L F ++ A G I +AYLVF QI +P+ F++NT+IRG + ++ PR+A+
Sbjct: 5 GFLSDP-SELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAV 63
Query: 73 LLFIDMLVTSP---IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
L+ ML ++P +LT+P + +A +G G Q+H VVK G E D F+ N +
Sbjct: 64 SLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNAL 123
Query: 130 IYMYANCGFL-------------------------------SEARLMFDEVDTEFDVVAW 158
I M+A+CG L AR +FDE + D+V+W
Sbjct: 124 IGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVK-DLVSW 182
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
N MI AK G++ +R LFD++ R+ VSWN MISGYVR ALELF +MQ K
Sbjct: 183 NVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEK 242
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN---TIVVTAIIDMYCKCGCPERA 275
P TM+SLL+ACA G + G+ +H+ L ++ F N ++ A+IDMY KCG + A
Sbjct: 243 PDIVTMLSLLSACADSGDLDVGQRLHSSL-SDMFSRNGFPVVLGNALIDMYAKCGSMKSA 301
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+VF ++ K +S WNS+V GLA++G+ E+I +F + ++PD I+F+AVL AC+H
Sbjct: 302 HEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHG 361
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
G V++ +++F LM Y+++P+IKHY CMVD LGRAGLL+EA + I +M +P+++IW +
Sbjct: 362 GMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRT 421
Query: 396 LLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
LLSACR HG IE+AK A +Q+++ +ES YVL+SN+YA+ ++ + + R LM + +
Sbjct: 422 LLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGV 481
Query: 456 EKE 458
KE
Sbjct: 482 NKE 484
>gi|108706388|gb|ABF94183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 823
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/483 (40%), Positives = 294/483 (60%), Gaps = 42/483 (8%)
Query: 15 GLAKDPIAASRILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAI 72
G DP + R L F ++ A G I +AYLVF QI +P+ F++NT+IRG + ++ PR+A+
Sbjct: 5 GFLSDP-SELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAV 63
Query: 73 LLFIDMLVTSP---IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
L+ ML ++P +LT+P + +A +G G Q+H VVK G E D F+ N +
Sbjct: 64 SLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNAL 123
Query: 130 IYMYANCGFL-------------------------------SEARLMFDEVDTEFDVVAW 158
I M+A+CG L AR +FDE + D+V+W
Sbjct: 124 IGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVK-DLVSW 182
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
N MI AK G++ +R LFD++ R+ VSWN MISGYVR ALELF +MQ K
Sbjct: 183 NVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEK 242
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN---TIVVTAIIDMYCKCGCPERA 275
P TM+SLL+ACA G + G+ +H+ L ++ F N ++ A+IDMY KCG + A
Sbjct: 243 PDIVTMLSLLSACADSGDLDVGQRLHSSL-SDMFSRNGFPVVLGNALIDMYAKCGSMKSA 301
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+VF ++ K +S WNS+V GLA++G+ E+I +F + ++PD I+F+AVL AC+H
Sbjct: 302 HEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHG 361
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
G V++ +++F LM Y+++P+IKHY CMVD LGRAGLL+EA + I +M +P+++IW +
Sbjct: 362 GMVDKGREFFNLMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRT 421
Query: 396 LLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
LLSACR HG IE+AK A +Q+++ +ES YVL+SN+YA+ ++ + + R LM + +
Sbjct: 422 LLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGV 481
Query: 456 EKE 458
KE
Sbjct: 482 NKE 484
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 192/476 (40%), Positives = 302/476 (63%), Gaps = 13/476 (2%)
Query: 37 INYAYLVFTQIKKPNL--FIWNTIIRGFSQSSTP--RNAILLFIDMLVTSPIQPQRLTYP 92
I+YA +F I+ L F+WN IIR + +P R++ + + + P T+P
Sbjct: 7 ISYANPIF-HIRHLKLESFVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFP 65
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE 152
L ++ G + H +++ GL+ D F+ +++ MY++CG LS A +FDE ++
Sbjct: 66 FLLPSFHNPIHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSK 125
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
D+ AWNS++ AK G I+ +R+LFD+M RN +SW+ +I+GYV K+KEAL+LFREM
Sbjct: 126 -DLPAWNSVVNAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 184
Query: 213 Q-----EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
Q E + P++FTM ++L+AC +LGA+ QG+W+H+++ E++ ++ TA+IDMY
Sbjct: 185 QLPKPNEVFVSPNKFTMSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYA 244
Query: 268 KCGCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN-LKPDYISF 325
KCG ERA +VF+ + KK + +++M+ LAM G +E ++FS + +SN + P+ ++F
Sbjct: 245 KCGSLERAKRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTF 304
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ +L AC H G +N+ K YF +MTE + I PSI+HY CMVD GR+GL++EAE I SMP
Sbjct: 305 VGILGACVHRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP 364
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+PD +IWGSLLS R G+I+ + A K++IELD S YVL+SN+YA + ++ E
Sbjct: 365 MEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKR 424
Query: 446 ERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R M+ I+K PGCS +EV+G VHEFV G ++ +Y +L ++ ++E G
Sbjct: 425 IRHEMEVKGIKKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAG 480
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 142/334 (42%), Gaps = 68/334 (20%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTS------------------------------PA 34
++ HA ++ GL KDP + +L +S A
Sbjct: 81 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKA 140
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSP----IQPQRLT 90
G IN+A +F ++ + N+ W+ +I G+ + A+ LF +M + P + P + T
Sbjct: 141 GLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFVSPNKFT 200
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
++ A +LG G +H + K G+E D + +I MYA CG L A+ +FD +
Sbjct: 201 MSTVLSACGRLGALEQGKWVHSYIDKYGVEIDIVLGTALIDMYAKCGSLERAKRVFDALG 260
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
++ DV A+++MI LA G DE ++F +M + N
Sbjct: 261 SKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSN------------------------- 295
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCK 268
NI P+ T V +L AC G I +G+ ++T F + + ++D+Y +
Sbjct: 296 -----NINPNSVTFVGILGACVHRGLINKGKSYFK-MMTEEFGITPSIQHYGCMVDLYGR 349
Query: 269 CGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
G + A ++P + + W S++ G M G
Sbjct: 350 SGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 383
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 307/505 (60%), Gaps = 15/505 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K LK+IH +I G ++ ++L+F + +G++ A+ VF +I+ P+ +WN +IR
Sbjct: 47 IKKLKQIHTQIIVNGFSQKNFLLVKLLSFYIT-SGNLLNAHKVFERIENPSTTVWNQMIR 105
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G SQS TP + L+ + +V + +P TY L A+ L R+G Q+HGRVV G
Sbjct: 106 GHSQSETPHKLVELY-NRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVANGYC 164
Query: 121 FDQFIHNTIIYMYANCGF---LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
+ F+ +++ +YA G + +AR +FDE+ + ++V+WNS++ G +CG++D +RR+
Sbjct: 165 TNVFVRTSLVNLYAIAGGYDGVRKARRVFDEI-VDRNIVSWNSLLAGYVRCGDVDGARRI 223
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD+M RN VSW +MI+G + + K+AL LF EM+ +K + +V+ L+ACA+LG +
Sbjct: 224 FDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDL 283
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAI----IDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ G WIH+++ N ++ ++ I MY CG ++A +VF + ++ W SM
Sbjct: 284 KLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSM 343
Query: 294 VFGLAMNGYENEAIKLFSGLQ---SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
+ G A G+ EA+ +F +Q + +PD I+FI VL AC+H+G V+Q + +F M +
Sbjct: 344 ITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNK 403
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
+ I P I+HY CMVD L RAG L+EA +L SMP P+ +WG+LL CR H N E+A
Sbjct: 404 KWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIHKNAELAS 463
Query: 411 QAAKQ-IIELDKNESCGY-VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
A++ ++EL +++ GY VL+SN+YA + ++++ R M E+ + K G S ++++G
Sbjct: 464 HVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQING 523
Query: 469 EVHEFVAGGRLHPKAPEVYLLLNDL 493
VH+FVAG H A VY +L+ +
Sbjct: 524 VVHDFVAGDWTHKHASSVYEMLSKI 548
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/459 (38%), Positives = 287/459 (62%), Gaps = 3/459 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A VF + ++ W T+I G++ A+ +F ++++ S ++P +T ++
Sbjct: 306 GLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVF-ELMLLSHVEPNEVTLIAV 364
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A + +G G ++H +V ++ + +HN ++ MY C L +AR +FD + T+ D
Sbjct: 365 VSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK-D 423
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V +W SM+ G AKCG+++ +RR FD+ +N V W++MI+GY +N K KE+L+LF EM E
Sbjct: 424 VYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMME 483
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHN-FLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ + P E T+VS+L+AC +L + G+WIH F+V L+ + AI+DMY KCG +
Sbjct: 484 RGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSID 543
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A +VF+T+P++ L WN+M+ G A NG +AI +F +++ +P+ I+F+++LTAC+
Sbjct: 544 AATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACS 603
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
H G +++ ++YF M Y IKP HY+CMVD LGR GLLEEA KLI +MP P W
Sbjct: 604 HGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAW 663
Query: 394 GSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEV 453
G+LL+ACR HGN+E+A+ +A ++ LD +S YVL++N A ++ + R LMK+
Sbjct: 664 GALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDK 723
Query: 454 KIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLND 492
++K PG SLIE+DG EF+ HP++ E+Y L D
Sbjct: 724 GVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYKLECD 762
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 208/447 (46%), Gaps = 75/447 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ LK+I A + TG+ SR++AFC + +GD++YA+ +F ++++PN F+WNT+I
Sbjct: 170 MRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMI 229
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+ + P A F+ M ++ ++ KA Q +G ++ V K G
Sbjct: 230 RGYQNARKPIFAFSFFVYMFQLR-VEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGF 288
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA--KCGEIDESRRL 177
+ + + N +I+ YA G L AR +FDE ++ DVV W +MI G A C E
Sbjct: 289 DCELLVRNGLIHFYAERGLLKNARQVFDE-SSDKDVVTWTTMIDGYAAHDCSE------- 340
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
EA+E+F M +++P+E T++++++AC+ +G +
Sbjct: 341 --------------------------EAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNL 374
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC-------------------------- 271
G+ +H + + + A++DMY KC C
Sbjct: 375 EMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGY 434
Query: 272 -----PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
E A + F+ P+K CW++M+ G + N E++KLF + + P + +
Sbjct: 435 AKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLV 494
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKP-SIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+VL+AC +N D+ KI P S+ + +VD + G ++ A ++ +MP
Sbjct: 495 SVLSACGQLTCLNLG-DWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMP 553
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQA 412
+ + I W ++++ +G AKQA
Sbjct: 554 -ERNLISWNTMIAGYAANGR---AKQA 576
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 160/351 (45%), Gaps = 14/351 (3%)
Query: 141 EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNV 200
+AR+ + T V+ LA G++ + +F+++ NT WN+MI GY
Sbjct: 177 QARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNAR 236
Query: 201 KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
K A F M + ++ + V L AC + + +GE ++ + F+ +V
Sbjct: 237 KPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRN 296
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
+I Y + G + A QVF+ K + W +M+ G A + EA+++F + S+++P
Sbjct: 297 GLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEP 356
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
+ ++ IAV++AC+ G + K + E ++ S+ ++ ++D + L +A +L
Sbjct: 357 NEVTLIAVVSACSDMGNLEMGKRVHEKVEEK-NMRCSLSLHNALLDMYVKCDCLVDAREL 415
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC------GYVLMSNLY 434
M + D W S+++ K G++E A++ Q KN C GY +
Sbjct: 416 FDRMATK-DVYSWTSMVNGYAKCGDLESARRFFDQTPR--KNAVCWSAMIAGYSQNNKPK 472
Query: 435 AASYQFEEAMEERLL-MKEVKIEKEPGC---SLIEVDGEVHEFVAGGRLHP 481
+ F E ME ++ ++ + C + + + +H++ G++ P
Sbjct: 473 ESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIP 523
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 191/485 (39%), Positives = 308/485 (63%), Gaps = 24/485 (4%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCT--SPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+L++IHA +IKT L SR++AFC+ +G ++YA VF++I+ PN FI+ +I+
Sbjct: 21 ELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSFIFFALIK 80
Query: 61 GFSQSSTPRNAILLFIDML----VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
GFS +S P +++L+ ML +S ++ + PS+ KA +L +G Q+HG+V+K
Sbjct: 81 GFSDTSNPVESLILYARMLSCLNYSSGVE---FSIPSVLKACGKLLAFDEGRQVHGQVLK 137
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
L FD F+ N+++ MY + G + AR +FD + DVV+WNSMI G K GEI+ +
Sbjct: 138 THLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNR-DVVSWNSMIAGYLKAGEIELASE 196
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
LFD+M R+ VS N+MI GY +EM ++P +VS+L+A A LG
Sbjct: 197 LFDEMPERDLVSCNAMIDGY------------GKEMLSLGLRPDGPAIVSVLSAIADLGF 244
Query: 237 IRQGEWIHNFLVTNCFELNT-IVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMV 294
+ +G+W+H ++ N EL++ + +A+IDMY KCG E A VF ++ ++ + WNSM+
Sbjct: 245 VEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMI 304
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLA++G EA+ +F ++ +++P+ I+F+ +L+ C+H G V + + YF M E YKI
Sbjct: 305 SGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKI 364
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P I+HY CM+D GRAG LE+A +I++MP + D + W ++LSA KHG+IE+ K AA
Sbjct: 365 VPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAAL 424
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+ IEL ++S YVL+SN+YA + ++++ + RL+M++ ++K GCS + V+G+VHEF+
Sbjct: 425 RAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSMLVNGKVHEFL 484
Query: 475 AGGRL 479
G L
Sbjct: 485 LGKEL 489
>gi|449486568|ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Cucumis sativus]
Length = 532
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/504 (38%), Positives = 301/504 (59%), Gaps = 8/504 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+ HA ++K+GL SR+L FC S G +++A+ +F I+ P + I+NT+I
Sbjct: 18 MNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFKLFQHIQHPTICIFNTMI 77
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ NAI +F + + I P T P + KA A++ G +H +K G
Sbjct: 78 KALLLRGEFLNAIAVF-SAIFRNGIHPDTYTLPYVLKASARMTNIHLGESIHACTIKLGS 136
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
++F+ N+++ MY + + AR +FDE+ E V+W MI G A G++D +R LFD
Sbjct: 137 AVNEFVGNSLLVMYRSFDNMRSARQVFDEM-PELSAVSWTVMIYGYANMGDVDTARELFD 195
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
++T W +MISGYV+N FKE L +FR MQ ++P E +V++L+ACA +GA+
Sbjct: 196 MATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTILSACAHMGALDT 255
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G WIH +L L V T +IDMY KCG + A +FN + ++ CWN+M+ G+AM
Sbjct: 256 GIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQRDNVCWNAMISGMAM 315
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G AIKLF ++ + +KPD I+FIAV AC++SG V++ + M+ +KI+P +
Sbjct: 316 DGDGEGAIKLFMEMEKAGIKPDNITFIAVWXACSNSGMVDEGIRIWNRMSTVHKIEPKSE 375
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPS----DPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
HY C++D L R G EEAE +I+ +P +A+ W + LSAC KHG + A+ AA++
Sbjct: 376 HYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSACCKHGQTQQAEVAAER 435
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+ +L+++ S YVL+SN+YAA + E+A R +MK +EK PGCS I+V+G V+EF+A
Sbjct: 436 LFQLERH-SGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEKVPGCSSIKVNGVVNEFIA 494
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQE 499
G + H ++L+L +L I E
Sbjct: 495 GEKTHRHIDNIHLVLEELNKQIVE 518
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/490 (38%), Positives = 301/490 (61%), Gaps = 3/490 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
KK+H H++K GL + + L S G ++ A VF + K ++F WN +I G+++
Sbjct: 155 KKLHCHVVKFGLGSN-LYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+I L ++M + + P +T + A +++ ++H V + E
Sbjct: 214 MKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ YA CG + A +F + DV++W S++ G + G + +R FD+M R
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SW MI GY+R F E+LE+FREMQ + P EFTMVS+L ACA LG++ GEWI
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N + + +V A+IDMY KCGC E+A +VF+ + ++ W +MV GLA NG
Sbjct: 392 TYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQ 451
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EAIK+F +Q +++PD I+++ VL+ACNHSG V+QA+ +F M ++I+PS+ HY CM
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAGL++EA +++R MP +P++I+WG+LL A R H + MA+ AAK+I+EL+ +
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNG 571
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
Y L+ N+YA ++++ E R + +V I+K PG SLIEV+G HEFVAG + H ++
Sbjct: 572 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 631
Query: 485 EVYLLLNDLG 494
E+Y+ L +L
Sbjct: 632 EIYMKLEELA 641
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 209/428 (48%), Gaps = 26/428 (6%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
K++H+ I G+A +P ++ F C+ G ++YAY +F +I +P++ +WN +I+G+
Sbjct: 50 FKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGW 109
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA------QLHGRVVK 116
S+ + L+++ML + P T+P L GL RDG +LH VVK
Sbjct: 110 SKVDCDGEGVRLYLNML-KEGVTPDSHTFPFLLN-----GLKRDGGALACGKKLHCHVVK 163
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
GL + ++ N ++ MY+ CG + AR +FD E DV +WN MI G + E +ES
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE-DVFSWNLMISGYNRMKEYEESIE 222
Query: 177 LFDKMVSRNTVSWNS----MISGYVRNVKFKEALELFRE-MQEQNIKPSEFTMVSLLNAC 231
L +M RN VS S ++ VK K+ + E + E +PS +L+NA
Sbjct: 223 LLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY 281
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A G + I + + I T+I+ Y + G + A F+ +P + W
Sbjct: 282 AACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
M+ G G NE++++F +QS+ + PD + ++VLTAC H G + + ++ +
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL-EIGEWIKTYIDK 396
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
KIK + + ++D + G E+A+K+ M D W +++ +G + A +
Sbjct: 397 NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM-DQRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 412 AAKQIIEL 419
Q+ ++
Sbjct: 456 VFFQMQDM 463
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 140/279 (50%), Gaps = 8/279 (2%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G + + +LF K+ + V WN+MI G+ + E + L+ M ++ + P T LL
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 229 NACAKLG-AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
N + G A+ G+ +H +V N V A++ MY CG + A VF+ K+ +
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 288 SCWNSMVFGL-AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
WN M+ G M YE E+I+L ++ + + P ++ + VL+AC+ + K
Sbjct: 202 FSWNLMISGYNRMKEYE-ESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI 406
++E K +PS++ + +V+A G ++ A ++ RSM + D I W S++ + GN+
Sbjct: 261 YVSEC-KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNL 318
Query: 407 EMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
++A+ Q+ D+ + +M + Y + F E++E
Sbjct: 319 KLARTYFDQMPVRDR---ISWTIMIDGYLRAGCFNESLE 354
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 166/350 (47%), Gaps = 20/350 (5%)
Query: 2 KDL-KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
KDL K++H ++ + + + L + G+++ A +F +K ++ W +I++
Sbjct: 252 KDLCKRVHEYVSECK-TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVK 310
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ + + A F M P++ R+++ + Y + G + ++ + G+
Sbjct: 311 GYVERGNLKLARTYFDQM----PVR-DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 121 FDQFIHNTIIYMYANCGFLSEA---RLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
D+F +++ A+ G L + D+ + DVV N++I KCG ++++++
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
F M R+ +W +M+ G N + +EA+++F +MQ+ +I+P + T + +L+AC G +
Sbjct: 426 FHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMV 485
Query: 238 RQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
Q ++ + E + + ++DM + G + A ++ +P NS+V+G
Sbjct: 486 DQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNP----NSIVWG 541
Query: 297 LAMNG---YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
+ + +E + + + L+PD + A+L CN + KD
Sbjct: 542 ALLGASRLHNDEPMAELAAKKILELEPDNGAVYALL--CNIYAGCKRWKD 589
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 296/504 (58%), Gaps = 4/504 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K++K+IHA L+ G+ +P + +A +++YA + P LF N++I
Sbjct: 22 LKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNPTLFTLNSMI 81
Query: 60 RGFSQSSTPRNAILLFIDMLVTSP--IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
R +S+SSTP + + ++L ++ + P T+ L + AQL G +HG V+K
Sbjct: 82 RAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGAVIKH 141
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G E D + +++MYA G LS +FD E D+V +M+ AKCG+ID +R++
Sbjct: 142 GFELDPHVQTGLVFMYAELGCLSSCHNVFDGA-VEPDLVTQTAMLNACAKCGDIDFARKM 200
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD+M R+ V+WN+MI+GY + + +EAL++F MQ + +K +E +MV +L+AC L +
Sbjct: 201 FDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVL 260
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G W+H ++ + + TA++DMY KCG +RA+QVF + ++ + W+S + GL
Sbjct: 261 DHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGL 320
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AMNG+ E++ LF+ ++ ++P+ I+FI+VL C+ G V + + +F M Y I P
Sbjct: 321 AMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVYGIGPQ 380
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
++HY MVD GRAG L+EA I SMP P W +LL ACR + N E+ + A ++I+
Sbjct: 381 LEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIAQRKIV 440
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
EL+ YVL+SN+YA +E R MK ++K PGCS+IEVDGEVHEF+ G
Sbjct: 441 ELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCSVIEVDGEVHEFIVGD 500
Query: 478 RLHPKAPEVYLLLNDLGLLIQEMG 501
+ HP+ E+ + L ++ ++ G
Sbjct: 501 KSHPRYDEIEMKLEEISKCLRLSG 524
>gi|218192167|gb|EEC74594.1| hypothetical protein OsI_10176 [Oryza sativa Indica Group]
Length = 523
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/483 (40%), Positives = 294/483 (60%), Gaps = 42/483 (8%)
Query: 15 GLAKDPIAASRILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAI 72
G DP + R L F ++ A G I +AYLVF QI +P+ F++NT+IRG + ++ PR+A+
Sbjct: 5 GFLSDP-SELRELLFASAVAVRGAIAHAYLVFDQIPRPDRFMYNTLIRGAAHTAAPRDAV 63
Query: 73 LLFIDMLVTSP---IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
L+ ML ++P +LT+P + +A +G G Q+H VVK G E D F+ N +
Sbjct: 64 SLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCESDAFVKNAL 123
Query: 130 IYMYANCGFL-------------------------------SEARLMFDEVDTEFDVVAW 158
I M+A+CG L AR +FDE + D+V+W
Sbjct: 124 IGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDECPVK-DLVSW 182
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
N MI AK G++ +R LFD++ R+ VSWN MISGYVR ALELF +MQ K
Sbjct: 183 NVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEK 242
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN---TIVVTAIIDMYCKCGCPERA 275
P TM+SLL+ACA G + G+ +H+ L ++ F N ++ A+IDMY KCG + A
Sbjct: 243 PDIVTMLSLLSACADSGDLDVGQRLHSSL-SDMFSRNGFPVVLGNALIDMYAKCGSMKSA 301
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+VF ++ K +S WNS+V GLA++G+ E+I +F + ++PD I+F+AVL AC+H
Sbjct: 302 HEVFWSMRDKDVSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHG 361
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
G V++ +++F LM Y+++P+IKHY C+VD LGRAGLL+EA + I +M +P+++IW +
Sbjct: 362 GMVDKGREFFNLMQHKYRVEPNIKHYGCIVDMLGRAGLLKEAFEFIDTMKCEPNSVIWRT 421
Query: 396 LLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
LLSACR HG IE+AK A +Q+++ +ES YVL+SN+YA+ ++ + + R LM + +
Sbjct: 422 LLSACRVHGEIELAKHANRQLLKARNDESGDYVLLSNIYASVGEWFGSEKMRKLMDDSGV 481
Query: 456 EKE 458
KE
Sbjct: 482 NKE 484
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 185/494 (37%), Positives = 302/494 (61%), Gaps = 8/494 (1%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+LK IHAH+IK L++ ++++ C D+ YA L+F Q+K+PN +++N +IR
Sbjct: 29 ELKSIHAHVIKYSLSQSSFLVTKMVDVCDKTE-DLGYASLLFKQVKEPNGYLYNAMIRAH 87
Query: 63 SQSSTPRNAILLFIDML------VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+ + AIL + +ML +PI P R T+P + K+ + L G Q+H + K
Sbjct: 88 THNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGKQVHAHLCK 147
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G + + + N +I MY C L +A +FD + E D ++WNS+I G G++ ++
Sbjct: 148 FGPKSNITMENALIDMYTKCASLLDAHKVFDGM-VERDAISWNSIISGHVGVGQMRKAGA 206
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
LFD M R VSW +MISGY R + +AL +FR+MQ ++P E +++S+L ACA+LGA
Sbjct: 207 LFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGA 266
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G+WIH + N T + A+++MY KCGC +A Q+F+ + K + W++M+ G
Sbjct: 267 LEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGG 326
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA +G EAI+LF ++ + ++P+ I+F+ +L+AC H+G N+ YF M++ Y I+P
Sbjct: 327 LANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSMSKDYHIEP 386
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++HY C+VD LGRAG L +A +I MP PD+ IWGSLLS+CR H N+++A A + +
Sbjct: 387 EVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDIAIIAMEHL 446
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
EL+ +++ YVL+SN+YA +++ R L+K ++K PG SLI+++ V EFV+
Sbjct: 447 EELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSLIDINNVVQEFVSW 506
Query: 477 GRLHPKAPEVYLLL 490
P + +++ LL
Sbjct: 507 DDSKPFSRDIFWLL 520
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 190/490 (38%), Positives = 301/490 (61%), Gaps = 3/490 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
KK+H H++K GL + + L S G ++ A VF + K ++F WN +I G+++
Sbjct: 155 KKLHCHVVKFGLGSN-LYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+I L ++M + + P +T + A +++ ++H V + E
Sbjct: 214 MKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ YA CG + A +F + DV++W S++ G + G + +R FD+M R
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SW MI GY+R F E+LE+FREMQ + P EFTMVS+L ACA LG++ GEWI
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N + + +V A+IDMY KCGC E+A +VF+ + ++ W +MV GLA NG
Sbjct: 392 TYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQ 451
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EAIK+F +Q +++PD I+++ VL+ACNHSG V+QA+ +F M ++I+PS+ HY CM
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAGL++EA +++R MP +P++I+WG+LL A R H + MA+ AAK+I+EL+ +
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNG 571
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
Y L+ N+YA ++++ E R + +V I+K PG SLIEV+G HEFVAG + H ++
Sbjct: 572 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 631
Query: 485 EVYLLLNDLG 494
E+Y+ L +L
Sbjct: 632 EIYMKLEELA 641
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 202/413 (48%), Gaps = 26/413 (6%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
K++H+ I G+A +P ++ F C+ G ++YAY +F +I +P++ +WN +I+G+
Sbjct: 50 FKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGW 109
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA------QLHGRVVK 116
S+ + L+++ML + P T+P L GL RDG +LH VVK
Sbjct: 110 SKVDCDGEGVRLYLNML-KEGVTPDSHTFPFLLN-----GLKRDGGALACGKKLHCHVVK 163
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
GL + ++ N ++ MY+ CG + AR +FD E DV +WN MI G + E +ES
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE-DVFSWNLMISGYNRMKEYEESIE 222
Query: 177 LFDKMVSRNTVSWNS----MISGYVRNVKFKEALELFRE-MQEQNIKPSEFTMVSLLNAC 231
L +M RN VS S ++ VK K+ + E + E +PS +L+NA
Sbjct: 223 LLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY 281
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A G + I + + I T+I+ Y + G + A F+ +P + W
Sbjct: 282 AACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
M+ G G NE++++F +QS+ + PD + ++VLTAC H G + + ++ +
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL-EIGEWIKTYIDK 396
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
KIK + + ++D + G E+A+K+ M D W +++ +G
Sbjct: 397 NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM-DQRDKFTWTAMVVGLANNG 448
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 140/279 (50%), Gaps = 8/279 (2%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G + + +LF K+ + V WN+MI G+ + E + L+ M ++ + P T LL
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 229 NACAKLG-AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
N + G A+ G+ +H +V N V A++ MY CG + A VF+ K+ +
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 288 SCWNSMVFGL-AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
WN M+ G M YE E+I+L ++ + + P ++ + VL+AC+ + K
Sbjct: 202 FSWNLMISGYNRMKEYE-ESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI 406
++E K +PS++ + +V+A G ++ A ++ RSM + D I W S++ + GN+
Sbjct: 261 YVSEC-KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNL 318
Query: 407 EMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
++A+ Q+ D+ + +M + Y + F E++E
Sbjct: 319 KLARTYFDQMPVRDR---ISWTIMIDGYLRAGCFNESLE 354
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 166/350 (47%), Gaps = 20/350 (5%)
Query: 2 KDL-KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
KDL K++H ++ + + + L + G+++ A +F +K ++ W +I++
Sbjct: 252 KDLCKRVHEYVSECK-TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVK 310
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ + + A F M P++ R+++ + Y + G + ++ + G+
Sbjct: 311 GYVERGNLKLARTYFDQM----PVR-DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 121 FDQFIHNTIIYMYANCGFLSEA---RLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
D+F +++ A+ G L + D+ + DVV N++I KCG ++++++
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
F M R+ +W +M+ G N + +EA+++F +MQ+ +I+P + T + +L+AC G +
Sbjct: 426 FHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMV 485
Query: 238 RQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
Q ++ + E + + ++DM + G + A ++ +P NS+V+G
Sbjct: 486 DQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNP----NSIVWG 541
Query: 297 LAMNG---YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
+ + +E + + + L+PD + A+L CN + KD
Sbjct: 542 ALLGASRLHNDEPMAELAAKKILELEPDNGAVYALL--CNIYAGCKRWKD 589
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 179/491 (36%), Positives = 304/491 (61%), Gaps = 36/491 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSP-AGDINYAYLVFTQIKKPNLFIWNTI 58
+ ++++ HA ++KTGL D +AS+++AF T+P ++YA+ + +I PN F N++
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IR ++ SSTP A+ +F +ML+ P+ P + ++ + KA A +G Q+HG +K G
Sbjct: 112 IRAYANSSTPEVALTVFREMLL-GPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 119 LEFDQFIHNTIIYMYANCGF-------------------------------LSEARLMFD 147
L D F+ NT++ +Y G+ + EAR +FD
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFD 230
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
E++ E +V +WN MI G A G + E++ +FD M R+ VSWN+M++ Y + E LE
Sbjct: 231 EME-ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLE 289
Query: 208 LFREMQEQNI-KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
+F +M + + KP FT+VS+L+ACA LG++ QGEW+H ++ + E+ + TA++DMY
Sbjct: 290 VFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMY 349
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG ++AL+VF K+ +S WNS++ L+++G +A+++FS + KP+ I+FI
Sbjct: 350 SKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFI 409
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
VL+ACNH G ++QA+ F +M+ Y+++P+I+HY CMVD LGR G +EEAE+L+ +P+
Sbjct: 410 GVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPA 469
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
D +I+ SLL AC++ G +E A++ A +++EL+ +S GY MSNLYA+ ++E+ ++
Sbjct: 470 DEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDG 529
Query: 447 RLLMKEVKIEK 457
R M+ ++ +
Sbjct: 530 RRNMRAERVNR 540
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 364 bits (934), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 184/500 (36%), Positives = 315/500 (63%), Gaps = 3/500 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M++ K++HAHLI +GL + +++ TS + +++A L+F + P+ +++NT+ R
Sbjct: 1 MQEAKRLHAHLITSGLHQQENHLRKLITLYTSSSSSLHHARLLFDAVYHPSTYLYNTMFR 60
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++ S TP +A+LL M P P T+P L KA + L G +LH + +K GL
Sbjct: 61 VYAASPTPLHALLLHRHMFRHGP-PPDTYTFPFLLKACSALAHLLKGQELHCQALKFGLG 119
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
F+ N++I++Y + + AR +FD + D+ +W +++ A ++ +R++FD+
Sbjct: 120 GHVFVENSLIHLYGSNSRMDSARRVFDGMGYR-DIASWTTLLACYANSCSVEAARKVFDE 178
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VS+++M++ YVR +F+EALELFRE+ I+PS+ ++S+L ACA LGA+ G
Sbjct: 179 MPERSVVSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCACANLGALDVG 238
Query: 241 EWIHNFLVTNCFE-LNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
W+++F+ + + +++ + TA+IDM+ KCG E AL VF +K + W +M+ GLAM
Sbjct: 239 RWVYSFVCHSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLAM 298
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G + I+ F + S +KPD ++F+A+L+ C+HSG VN+ YF M + ++P+++
Sbjct: 299 HGLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTVE 358
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
H+ C+VD LGRAGL+++A +LI MP +P+A IWG+LL+ACR + N+E+ + AA+ +I+
Sbjct: 359 HFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVEVGELAAQWLIKD 418
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ Y+ + +LY + +++E + +L MKEV K PGCSLIEV G +EFV G +
Sbjct: 419 EPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDKS 478
Query: 480 HPKAPEVYLLLNDLGLLIQE 499
HP A E+ L L+ + +E
Sbjct: 479 HPCAVEICLNLSKANMEFKE 498
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 193/479 (40%), Positives = 298/479 (62%), Gaps = 24/479 (5%)
Query: 34 AGDINYAYLVFTQIKKPNL--FIWNTIIRGFSQ--SSTPRNAILLFIDMLVTSPIQPQRL 89
A I YA +F I+ L F+WN IIR SS R++ + + + P
Sbjct: 5 AAIIAYANPIF-HIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFH 63
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T+P L ++ G + H +++ GL+ D F+ +++ MY++CG L A+ +FD+
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
++ D+ AWNS++ AK G ID++R+LFD+M RN +SW+ +I+GYV K+KEAL+LF
Sbjct: 124 GSK-DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLF 182
Query: 210 REMQ-----EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
REMQ E ++P+EFTM ++L+AC +LGA+ QG+W+H ++ E++ ++ TA+ID
Sbjct: 183 REMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALID 242
Query: 265 MYCKCGCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS-NLKPDY 322
MY KCG ERA +VFN + KK + +++M+ LAM G +E +LFS + +S N+ P+
Sbjct: 243 MYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNS 302
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
++F+ +L AC H G +N+ K YF +M E + I PSI+HY CMVD GR+GL++EAE I
Sbjct: 303 VTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA 362
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEE 442
SMP +PD +IWGSLLS R G+I+ + A K++IELD S YVL+SN+YA + ++ E
Sbjct: 363 SMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME 422
Query: 443 AMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
I K PGCS +EV+G VHEFV G ++ +Y +L+++ ++E G
Sbjct: 423 G-----------INKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAG 470
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 139/335 (41%), Gaps = 70/335 (20%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++ HA ++ GL KDP + +L +S GD+ A VF +L WN+++ +++
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSS-CGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 65 SS------------TPRN-------------------AILLFIDMLVTSP----IQPQRL 89
+ RN A+ LF +M + P ++P
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T ++ A +LG G +H + K +E D + +I MYA CG L A+ +F+ +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
++ DV A+++MI LA G DE +LF +M + +
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD------------------------ 296
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYC 267
NI P+ T V +L AC G I +G+ ++ F + + ++D+Y
Sbjct: 297 ------NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE-FGITPSIQHYGCMVDLYG 349
Query: 268 KCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
+ G + A ++P + + W S++ G M G
Sbjct: 350 RSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 363 bits (933), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 307/540 (56%), Gaps = 48/540 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ LK +HA +I GL + + ++++FC AGD+ YA +F QI +PN F++N++I
Sbjct: 127 MRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 186
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S S P +A+LLF M + S + P T P + KA + +HG +K G+
Sbjct: 187 RGYSNSDDPIDAVLLFRRM-ICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGI 245
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVD----------------------------- 150
F+ N +I +Y CG + AR +FD++
Sbjct: 246 GSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWNSMIEITGVKIDIIVRNALXDM 305
Query: 151 -----------------TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMI 193
E +VV+W SMI A+ G I+ +R++FD+M +N VSWNSMI
Sbjct: 306 YAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMI 365
Query: 194 SGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFE 253
S Y+R +++EAL+LF +M+ + P E T+VS+L AC++LG + G+ IHN++++N
Sbjct: 366 SCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGA 425
Query: 254 LNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL 313
+ ++IDMY KCG AL +F +P K L WN ++ LA++G EAIKLF +
Sbjct: 426 YGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEM 485
Query: 314 QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGL 373
Q+ PD I+ +L+AC+HSG V+ YF M Y++ I+HY+CMVD LGR GL
Sbjct: 486 QADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVXREIEHYACMVDLLGRGGL 545
Query: 374 LEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNL 433
L EA +LI MP PD ++WG+LL ACR HGN+E+ KQ KQ++EL+ + YVL+SN+
Sbjct: 546 LGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNI 605
Query: 434 YAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
Y + ++E+ + R LM + I+K S IE+DG ++EF+ + H + +Y +L+ L
Sbjct: 606 YWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQL 665
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/541 (36%), Positives = 306/541 (56%), Gaps = 40/541 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTII 59
++ +K+I A + KT L P+ + ++L C D ++YA +F I+ P++F++NT+I
Sbjct: 18 LRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDVFMYNTLI 77
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG S S TP NA+ LF++M S P ++ L KA A +G QLH V GL
Sbjct: 78 RGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVGYGL 137
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNS------------------- 160
+ F+ T+I MYA C L AR +FDE+ E ++VAWN+
Sbjct: 138 DSHLFVGTTLISMYAECACLVFARKVFDEM-IEPNIVAWNAIVAACFRCEGVKDAEQVFR 196
Query: 161 ------------MIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
M+ G K GE+ +R +F KM ++ VSW++MI G+ N F +A
Sbjct: 197 CMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAF 256
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
FRE++ + ++P+E ++ +L+ACA+ GA G +H F+ + F V A+ID Y K
Sbjct: 257 FREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSK 316
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG + A VF+ + ++ W +M+ G+AM+GY EAI+LF+ ++ SN+KPD I+FI++
Sbjct: 317 CGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISI 376
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC+H+G V+ YF+ M TY I+P I+HY CMVD GRAG L++A + MP P
Sbjct: 377 LYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISP 436
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
+ I+W +LL AC HGN+ +A Q +Q+ ELD S +VL+SN+YA + ++++ R
Sbjct: 437 NDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRR 496
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGR-------LHPKAPEVYLLLNDLGLLIQEMG 501
M +++K PG S+IEV+ ++ FVAG + H K E+ L G + E+G
Sbjct: 497 SMTHQRLKKTPGWSMIEVNRIIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVG 556
Query: 502 S 502
S
Sbjct: 557 S 557
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/501 (36%), Positives = 295/501 (58%), Gaps = 12/501 (2%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+DL + H ++ L++ A++I+ C + +A VF QI PNL + N +I+
Sbjct: 24 RDLLRAHGLAVRLCLSQSSYVATQIVHICNAHG-RAAHAARVFAQIPAPNLHLHNAMIKA 82
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQ--------RLTYPSLFKAYAQLGLARDGAQLHGR 113
++Q+ R+A+ +++ ML P P R TYP L KA L +R G Q+H
Sbjct: 83 YAQNHLHRDAVEVYVRMLRCLP-HPSTAGFSVGDRFTYPFLLKACGALAASRLGRQVHAH 141
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
V + G E + N++I MY CG LS AR FD + E DVV+WN++I A+ G++
Sbjct: 142 VARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGM-REKDVVSWNTLISAHARMGQMRR 200
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R LF M + VSW +++SGY F A+E+FR MQ + +P + ++V++L ACA+
Sbjct: 201 ARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVAVLPACAQ 260
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LGA+ G WI+ + + + A+++MY KCGC E ALQ+F+ + +K + W++
Sbjct: 261 LGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTA 320
Query: 294 VFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
+ GLA +G EA++LF + + + P+ I+F+ +L+AC+H+G V++ Y M E Y
Sbjct: 321 IGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVDEGLRYLDQMKEDY 380
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
++P ++HY C+VD LGR+G ++ A IR MP PD IWGSLLSACR HG++E A A
Sbjct: 381 GVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLSACRSHGDVETAVVA 440
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A++++EL+ + V+++N+Y A+ ++ E R ++ K PGCS+IEVD V E
Sbjct: 441 AERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTRKTPGCSMIEVDNVVRE 500
Query: 473 FVAGGRLHPKAPEVYLLLNDL 493
FVAG L P+ + +L+ L
Sbjct: 501 FVAGQDLGPELGGIATVLDIL 521
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/501 (38%), Positives = 299/501 (59%), Gaps = 7/501 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFI--WNTIIRGF 62
K +H IKT D + ++ F S G ++ AYLVF I+ N I WN+++ GF
Sbjct: 260 KAVHGMAIKTSFGDDVFVLNSLIHFYAS-CGHLDLAYLVFEMIEGNNKDIVSWNSMVTGF 318
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
Q P A+ LF + + + P +T S+ A A+ G ++ + + + +
Sbjct: 319 VQGGYPDKALDLF-ERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMN 377
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ N I M+ CG + AR +FD ++ DVV+W ++I G AK E +R +FD M
Sbjct: 378 LNVCNATIDMFVKCGEVEIARGLFDNMEKR-DVVSWTTIIDGYAKMSEHGIARDIFDSMP 436
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQ--EQNIKPSEFTMVSLLNACAKLGAIRQG 240
++ +WN +ISGY ++ + KEAL +FRE+Q + +P + T++S L+ACA+LGA+ G
Sbjct: 437 RKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIG 496
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
EWIH ++ +LN + T++IDMY K G E+A++VF+++ K + W++M+ GLAM+
Sbjct: 497 EWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMH 556
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G AI+LF +Q + +KP+ ++F +L AC+HSG V++ K F M Y + P KH
Sbjct: 557 GRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKH 616
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
YSCMVD LGRAG LEEA K I MP P A +WG+LL AC HGN+E+A++A +++E++
Sbjct: 617 YSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIE 676
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
YVL+SNLYA + +E E R M++ ++KE GCS IE+DG VHEF+ G H
Sbjct: 677 PGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAH 736
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P + ++Y L+++ ++ G
Sbjct: 737 PLSRDIYAKLDEIMARLRSHG 757
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 217/443 (48%), Gaps = 68/443 (15%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K LK+IHA +++T DP AAS + A S ++YA VF QI +PNL+ WN +IR
Sbjct: 153 KQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIR 212
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ SS P ++L+FI ML SP P + T+P L KA A+ G +HG +K
Sbjct: 213 ALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFG 272
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVD-TEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F+ N++I+ YA+CG L A L+F+ ++ D+V+WNSM+ G + G D
Sbjct: 273 DDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPD------- 325
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+AL+LF M+ + + P+ TMVS+++ACAK +
Sbjct: 326 ------------------------KALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTL 361
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE--RAL--------------------- 276
G + +++ N +N V A IDM+ KCG E R L
Sbjct: 362 GRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAK 421
Query: 277 --------QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ--SSNLKPDYISFI 326
+F+++P+K + WN ++ G +G EA+ +F LQ S +PD ++ +
Sbjct: 422 MSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLL 481
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+ L+AC G ++ ++ + +I+ + + ++D ++G +E+A ++ S+
Sbjct: 482 STLSACAQLGAMDIG-EWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSI-G 539
Query: 387 DPDAIIWGSLLSACRKHGNIEMA 409
+ D +W ++++ HG E A
Sbjct: 540 NKDVFVWSAMIAGLAMHGRGEAA 562
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/504 (37%), Positives = 299/504 (59%), Gaps = 6/504 (1%)
Query: 1 MKDL---KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
+KDL KK+ +++ + G+ I + ++ GDI A +F + NL ++NT
Sbjct: 244 LKDLELGKKVCSYISELGMELSTIMVNALVDM-YMKCGDICAARQIFDECANKNLVMYNT 302
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
I+ + + +++ +ML P +P ++T S A AQLG G H V++
Sbjct: 303 IMSNYVHHEWASDVLVILDEMLQKGP-RPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRN 361
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GLE I N II MY CG A +F+ + + VV WNS+I GL + G+++ + R+
Sbjct: 362 GLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNK-TVVTWNSLIAGLVRDGDMELAWRI 420
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD+M+ R+ VSWN+MI V+ F+EA+ELFREMQ Q I TMV + +AC LGA+
Sbjct: 421 FDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGAL 480
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
+W+ ++ N ++ + TA++DM+ +CG P A+ VF + K+ +S W + + +
Sbjct: 481 DLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVM 540
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AM G AI+LF+ + +KPD + F+A+LTAC+H G V+Q + F M + + I+P
Sbjct: 541 AMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPH 600
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I HY CMVD LGRAGLLEEA LI+SMP +P+ ++WGSLL+ACRKH N+E+A AA+++
Sbjct: 601 IVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLT 660
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+L +VL+SN+YA++ ++ + RL MKE ++K PG S IEV G +HEF +G
Sbjct: 661 QLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGD 720
Query: 478 RLHPKAPEVYLLLNDLGLLIQEMG 501
H + + L+L ++ + E G
Sbjct: 721 ESHAENTHIGLMLEEINCRLSEAG 744
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 238/485 (49%), Gaps = 85/485 (17%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKK----------- 49
+K+LK++H ++K GL C PA ++N QI
Sbjct: 38 LKELKQLHCDMMKKGL------------LCHKPASNLNKLIASSVQIGTLESLDYARNAF 85
Query: 50 -------PNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
+LF++N +IRG++ + AILL++ MLV I P + T+P L A +++
Sbjct: 86 GDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMG-IVPDKYTFPFLLSACSKIL 144
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+G Q+HG V+K GLE D F+ N++I+ YA
Sbjct: 145 ALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYA---------------------------- 176
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
+CG++D R+LFD M+ RN VSW S+I+GY KEA+ LF +M E ++P+
Sbjct: 177 ----ECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPV 232
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
TMV +++ACAKL + G+ + +++ EL+TI+V A++DMY KCG A Q+F+
Sbjct: 233 TMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDEC 292
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
K L +N+++ + + ++ + + + +PD ++ ++ + AC G ++ K
Sbjct: 293 ANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGK 352
Query: 343 DYFTLMTETYKIKPSIKHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
+ Y ++ ++ + + ++D + G E A K+ MP + + W SL++
Sbjct: 353 S-----SHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMP-NKTVVTWNSLIA 406
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQ---FEEAMEERLLMKEVKI 455
+ G++E+A + +++E D V + + A Q FEEA+E L +E++
Sbjct: 407 GLVRDGDMELAWRIFDEMLERD------LVSWNTMIGALVQVSMFEEAIE---LFREMQN 457
Query: 456 EKEPG 460
+ PG
Sbjct: 458 QGIPG 462
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 307/525 (58%), Gaps = 34/525 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +L + A +IKT +D + ++ + ++Y FTQ++ PN+F++N +I+
Sbjct: 52 INELHGLCASMIKTNAIQDCFLVHQFIS-ASFALNSVHYPVFAFTQMENPNVFVYNAMIK 110
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GF P A+ ++ ML S + P T+ SL KA + G +H + K+G E
Sbjct: 111 GFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFE 170
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
F+ ++ Y+ LSEAR +FDE+ E D AW +M+ LA+ G++D +R+LF++
Sbjct: 171 SHLFVQTALVDFYSKLEILSEARKVFDEM-CERDAFAWTAMLSALARVGDMDSARKLFEE 229
Query: 181 MVSRNTVSWNSMISGYVR-------------------------------NVKFKEALELF 209
M RNT +WN+MI GY R N ++++AL ++
Sbjct: 230 MPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIY 289
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
EM+ I P E TM ++ +ACA +GA+ G+ IH+++++ L+ + +A++DMY KC
Sbjct: 290 SEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKC 349
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G + +L +F + K L CWN+++ GLA++GY +A+++F+ ++ + P+ ++FI++L
Sbjct: 350 GSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISIL 409
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
+AC H+G V++ + F MT Y I+P I+HY CMVD L ++G L EA +LI+SM +P+
Sbjct: 410 SACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPN 469
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
+IIWG+LL+ C+ HGN E+A+ A +Q++ L+ S Y L+ ++YA + E R +
Sbjct: 470 SIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSM 529
Query: 450 MKEVKIEKE-PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
MKE +EK+ PG S IE++G +H+F A HP + ++Y +L +L
Sbjct: 530 MKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFILTEL 574
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/506 (36%), Positives = 303/506 (59%), Gaps = 40/506 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKD-PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ LK+IHA ++ GL + + I + S G + YA+ +F +I KP++ I N ++
Sbjct: 25 IRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVL 84
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG +QS P + L+ +M + P R T+ + KA ++L +G HG+VV+ G
Sbjct: 85 RGSAQSMKPEKTVSLYTEM-EKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF 143
Query: 120 EFDQFIHNTIIYMYANCGFL-------------------------------SEARLMFDE 148
++++ N +I +ANCG L EA +FDE
Sbjct: 144 VLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDE 203
Query: 149 VDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
+ + D VAWN MI G KC E+D +R LFD+ ++ V+WN+MISGYV KEAL +
Sbjct: 204 MPYK-DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGI 262
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL-----VTNCFELNTIVVTAII 263
F+EM++ P T++SLL+ACA LG + G+ +H ++ V++ + T + A+I
Sbjct: 263 FKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALI 322
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY KCG +RA++VF V + LS WN+++ GLA++ E +I++F +Q + P+ +
Sbjct: 323 DMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEV 381
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+FI V+ AC+HSG+V++ + YF+LM + Y I+P+IKHY CMVD LGRAG LEEA + S
Sbjct: 382 TFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVES 441
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
M +P+AI+W +LL AC+ +GN+E+ K A ++++ + K+ES YVL+SN+YA++ Q++
Sbjct: 442 MKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGV 501
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGE 469
+ R + + +++K G SLIE D +
Sbjct: 502 QKVRKMFDDTRVKKPTGVSLIEEDDD 527
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/554 (35%), Positives = 314/554 (56%), Gaps = 64/554 (11%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTIIR 60
++ ++HA IKT P +SR+LA P ++ YA+ +F I++P L WN +I+
Sbjct: 29 REANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIK 88
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ ++ +AI LF +L P T P + K A+LG ++G Q+HG V+K G
Sbjct: 89 CYIENQRSNDAIALFCKLLCD--FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFG 146
Query: 121 FDQFIHNTIIYM-------------------------------YANCGFLSEARLMFDEV 149
D+F+ ++++ M YA CG + A MF+E+
Sbjct: 147 VDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEM 206
Query: 150 DTE------------------------FD------VVAWNSMIIGLAKCGEIDESRRLFD 179
+ FD V+WN+MI G K G+ + ++ LFD
Sbjct: 207 PEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFD 266
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M R+ V+WNSMI+GY RN +F +AL+LF M ++I P+ T++ ++A + + ++
Sbjct: 267 QMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGT 326
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G W+H+++V + F+ + ++ T +I+MY KCG + AL+VF ++PKK L W S++ GL M
Sbjct: 327 GRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGM 386
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G + ++LF + + LKP I+FI VL AC+H+G A YF +MT Y IKPSI+
Sbjct: 387 HGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIE 446
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY C++D L RAG LEEA+ I MP + +IW SLLS RKHGNI M + AA+ +I+L
Sbjct: 447 HYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDL 506
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ + YV++SN+YAA+ +E+ + R +MK+ ++K+PGCS IE G +HEF+ G +
Sbjct: 507 APDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKS 566
Query: 480 HPKAPEVYLLLNDL 493
HP+ E+Y+ L ++
Sbjct: 567 HPQTEEIYIKLCEM 580
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 178/489 (36%), Positives = 290/489 (59%), Gaps = 34/489 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH + I++G+ D + + ++ + G++N A+ +F ++ ++ WN II G+S
Sbjct: 241 KQIHCYAIRSGIESDVLVVNGLVNM-YAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSL 299
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+S A+ F M V I+P +T S+ A A L G Q+HG ++ G E +
Sbjct: 300 NSQHHEALAFFNRMQVRG-IKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDV 358
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MYA KCG ++ + +LF++M +
Sbjct: 359 VGNALVNMYA--------------------------------KCGNVNSAYKLFERMPKK 386
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N V+WN++ISGY ++ EAL LF EMQ Q IKP F +VS+L ACA A+ QG+ IH
Sbjct: 387 NVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIH 446
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + + FE N +V T ++D+Y KCG A ++F +P++ + W +M+ ++G+
Sbjct: 447 GYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGE 506
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A+ LFS +Q + K D+I+F A+LTAC+H+G V+Q YF M Y + P ++HY+C+
Sbjct: 507 DALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACL 566
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L+EA +I++M +PDA +WG+LL ACR H NIE+ +QAAK + ELD + +
Sbjct: 567 VDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNA 626
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+SN+YA + ++E+ + R +MKE ++K+PGCS++ V +V F+ G R HP++
Sbjct: 627 GYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSE 686
Query: 485 EVYLLLNDL 493
++Y +L L
Sbjct: 687 QIYAMLEIL 695
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 188/384 (48%), Gaps = 52/384 (13%)
Query: 44 FTQIK-KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
FTQ + N +W I G+ ++ A+ L+ M T I P +L + S+ KA
Sbjct: 76 FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTG-INPDKLVFLSVIKACGSQS 134
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ G ++H ++ +G E D + + MY
Sbjct: 135 DLQAGRKVHEDIIARGFESDVIVGTALASMYT---------------------------- 166
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
KCG ++ +R++FD+M R+ VSWN++I+GY +N + EAL LF EMQ IKP+
Sbjct: 167 ----KCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSS 222
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T+VS++ CA L A+ QG+ IH + + + E + +VV +++MY KCG A ++F +
Sbjct: 223 TLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERM 282
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
P + ++ WN+++ G ++N +EA+ F+ +Q +KP+ I+ ++VL AC H + Q +
Sbjct: 283 PIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQ 342
Query: 343 DYFTLMTETYKIKPSIKHYSCMVDAL----GRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
Y I+ + + +AL + G + A KL MP + + W +++S
Sbjct: 343 Q-----IHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKK-NVVAWNAIIS 396
Query: 399 ACRKHGN--------IEMAKQAAK 414
+HG+ IEM Q K
Sbjct: 397 GYSQHGHPHEALALFIEMQAQGIK 420
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 203/555 (36%), Positives = 324/555 (58%), Gaps = 64/555 (11%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ LK++HA +I + ++A L+ + + YA +F ++ P ++N++IR
Sbjct: 109 LRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNPPPSLYNSLIR 168
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S S TP A+ L+ ML S ++P +TYP + KA + + G +H VVK G E
Sbjct: 169 ALSSSKTPLEALPLYHTML-QSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFE 227
Query: 121 FDQFIHNTIIYMYAN-------------C-------------GF-----LSEARLMFDEV 149
D +I +++I++YAN C G+ + AR++FD +
Sbjct: 228 CDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRM 287
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR--NV------- 200
DV++WN+MI G A G+IDE++RLFD+M RN VSWNSM++G+V+ NV
Sbjct: 288 VCR-DVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLF 346
Query: 201 ----------------------KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
K EAL LF +M+ +KP+E T+VSLL+ACA LGA+
Sbjct: 347 SEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALD 406
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+G +H ++ N E+N+IV TA++DMY KCG A QVFN + K + WN+++ G+A
Sbjct: 407 KGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMA 466
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G EA +LF ++ + ++P+ I+F+A+L+AC+H+G V++ + M+ +Y I+P +
Sbjct: 467 IHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKV 526
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C++D L RAG LEEA +LI +MP +P+ G+LL CR HGN E+ + K++I
Sbjct: 527 EHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLIN 586
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L S Y+L+SN+YAA+ ++++A + R LMK I K PG S+IE+ G VH FVAG
Sbjct: 587 LQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDW 646
Query: 479 LHPKAPEVYLLLNDL 493
HP++ ++Y LN++
Sbjct: 647 SHPESNKIYEKLNEI 661
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 184/482 (38%), Positives = 294/482 (60%), Gaps = 18/482 (3%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+I H++ G D ++ ++ S GD++ A +F + +L WN++I G+ +
Sbjct: 100 EILGHVLHLGFDSDIFVSNAVIHLLVS-CGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 158
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
A+ + +M V I+P +T + + AQL G + H + + GL+ +
Sbjct: 159 GWAYEALNFYREMKVEG-IKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPL 217
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
N ++ MY CG L AR +FD + T +V+W +M LFD+M ++
Sbjct: 218 ANALMDMYMKCGNLESARKLFDSM-TNKTMVSWTTM---------------LFDEMPDKD 261
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
V WN+MI GYV + KEAL LF EMQ NI P E TMVS L+AC++LGA+ G WIH+
Sbjct: 262 VVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHH 321
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + LN + TA+IDMY KCG +A+QVF +P + W +++ GLA++G +
Sbjct: 322 YIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHG 381
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AI FS + +++ PD ++F+ +L+AC H G V + + YF+ M+ + + P +KHYSCMV
Sbjct: 382 AIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMV 441
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAGLLEEAE+LI+SMP + DA++WG+L ACR HGN+ M ++AA +++++D ++S
Sbjct: 442 DLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSG 501
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL++N+Y + ++EA + R LM++ +EK PGCS IEV+G V+EF+ + HP++ +
Sbjct: 502 IYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQ 561
Query: 486 VY 487
+Y
Sbjct: 562 IY 563
Score = 217 bits (553), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 218/425 (51%), Gaps = 51/425 (12%)
Query: 11 LIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPR 69
++ TGL +D A+SR++AFC S D++Y + + PN F WN IRGF S PR
Sbjct: 1 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPR 60
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
A++L+ +L +P TYP LFKA A+L L R G+++ G V+ G + D F+ N +
Sbjct: 61 EAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAV 120
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 189
I++ +CG L AR MFD+ D+V+WNS
Sbjct: 121 IHLLVSCGDLDGARKMFDKSCVR-DLVSWNS----------------------------- 150
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
MI+GYVR EAL +REM+ + IKP E TM+ ++++CA+L + G H ++
Sbjct: 151 --MINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEE 208
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNT----------------VPKKGLSCWNSM 293
N +L + A++DMY KCG E A ++F++ +P K + WN+M
Sbjct: 209 NGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAM 268
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ G EA+ LF+ +Q+ N+ PD ++ ++ L+AC+ G ++ + E ++
Sbjct: 269 IGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGI-WIHHYIEKHE 327
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
+ ++ + ++D + G + +A ++ + +P +++ W +++S HGN A
Sbjct: 328 LSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGNAHGAIAYF 386
Query: 414 KQIIE 418
++I+
Sbjct: 387 SEMID 391
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 307/525 (58%), Gaps = 34/525 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +L + A +IKT +D + ++ + ++Y FTQ++ PN+F++N +I+
Sbjct: 149 INELHGLCASMIKTNAIQDCFLVHQFIS-ASFALNSVHYPVFAFTQMENPNVFVYNAMIK 207
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GF P A+ ++ ML S + P T+ SL KA + G +H + K+G E
Sbjct: 208 GFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFE 267
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
F+ ++ Y+ LSEAR +FDE+ E D AW +M+ LA+ G++D +R+LF++
Sbjct: 268 SHLFVQTALVDFYSKLEILSEARKVFDEM-CERDAFAWTAMVSALARVGDMDSARKLFEE 326
Query: 181 MVSRNTVSWNSMISGYVR-------------------------------NVKFKEALELF 209
M RNT +WN+MI GY R N ++++AL ++
Sbjct: 327 MPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIY 386
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
EM+ I P E TM ++ +ACA +GA+ G+ IH+++++ L+ + +A++DMY KC
Sbjct: 387 SEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKC 446
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G + +L +F + K L CWN+++ GLA++GY +A+++F+ ++ + P+ ++FI++L
Sbjct: 447 GSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISIL 506
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
+AC H+G V++ + F MT Y I+P I+HY CMVD L ++G L EA +LI+SM +P+
Sbjct: 507 SACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPN 566
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
+IIWG+LL+ C+ HGN E+A+ A +Q++ L+ S Y L+ ++YA + E R +
Sbjct: 567 SIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSM 626
Query: 450 MKEVKIEKE-PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
MKE +EK+ PG S IE++G +H+F A HP + ++Y +L +L
Sbjct: 627 MKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFVLTEL 671
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 361 bits (927), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 190/492 (38%), Positives = 302/492 (61%), Gaps = 18/492 (3%)
Query: 1 MKDLKKIHAHLIKTGL--AKDPIAA-SRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWN 56
+K++K IH H++K+ + +D +R+L FC+ S NYA VF IK P L ++N
Sbjct: 32 LKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYANNVFHMIKYPELRVYN 91
Query: 57 TIIR------GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD-GAQ 109
+IR G S+ A++L+ ML I P LT+P L K ++L G
Sbjct: 92 IMIRSYGCIEGGDDSNCCYKALMLYKQML-NKGIVPNNLTFPFLVKGCSRLQYGGTVGEV 150
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
+H V+K G D F+ N++I ++ N G AR +FDE+ DVV+WNSM++G + G
Sbjct: 151 IHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVR-DVVSWNSMVVGYLRNG 209
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ----EQNIKPSEFTMV 225
E++ + LF KM RN ++WNS+I+G V+ KE+LE+F EMQ + +KP + T+
Sbjct: 210 EVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIA 269
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
S+L+ACA LG+I G+W+H +L N E + ++ TA+++MY KCG ++A+++FN +P+K
Sbjct: 270 SVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEK 329
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
S W +M+ A++G+ +A F ++ + +KP++++F+ +L+AC+HSG V Q + F
Sbjct: 330 DASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCF 389
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+M Y I+P I HY+CMVD L RA L +EA LIRSMP PD +WG+LL C+ HGN
Sbjct: 390 DVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGN 449
Query: 406 IEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE-KEPGCSLI 464
I++ ++ A +I+L+ + Y+ + ++Y + +++ A R MKE IE K PGCS+I
Sbjct: 450 IKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCSII 509
Query: 465 EVDGEVHEFVAG 476
E++G V EF G
Sbjct: 510 EINGVVQEFSVG 521
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 177/463 (38%), Positives = 284/463 (61%), Gaps = 2/463 (0%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ GD+ A VF + +L WN +I G+ + AI ++ ++ + ++P +T
Sbjct: 202 ASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVY-KLMESEGVKPDDVTM 260
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
L + + LG G + + V + GL + N ++ M++ CG + EAR +FD ++
Sbjct: 261 IGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK 320
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+V+W +MI G A+CG +D SR+LFD M ++ V WN+MI G V+ + ++AL LF+E
Sbjct: 321 R-TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ N KP E TM+ L+AC++LGA+ G WIH ++ LN + T+++DMY KCG
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
AL VF+ + + + +++ GLA++G + AI F+ + + + PD I+FI +L+A
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H G + +DYF+ M + + P +KHYS MVD LGRAGLLEEA++L+ SMP + DA
Sbjct: 500 CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAA 559
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+WG+LL CR HGN+E+ ++AAK+++ELD ++S YVL+ +Y + +E+A R +M
Sbjct: 560 VWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMN 619
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLG 494
E +EK PGCS IEV+G V EF+ + P++ ++Y L+ LG
Sbjct: 620 ERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLG 662
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 219/449 (48%), Gaps = 68/449 (15%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+I A +I GL DP A+SR++AFC S + ++Y+ + I+ PN+F WN IRGF
Sbjct: 69 LKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGF 128
Query: 63 SQSSTPRNAILLFIDMLVTSPIQ--PQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S+S P+ + LL+ ML + P TYP LFK A L L+ G + G V+K LE
Sbjct: 129 SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+HN I+M+A+CG + AR +FDE D+V+WN +I G K GE +
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVR-DLVSWNCLINGYKKIGEAE-------- 239
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+A+ +++ M+ + +KP + TM+ L+++C+ LG + +G
Sbjct: 240 -----------------------KAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRG 276
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ + ++ N + +V A++DM+ KCG A ++F+ + K+ + W +M+ G A
Sbjct: 277 KEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 301 GYEN-------------------------------EAIKLFSGLQSSNLKPDYISFIAVL 329
G + +A+ LF +Q+SN KPD I+ I L
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
+AC+ G ++ + E Y + ++ + +VD + G + EA + + + +
Sbjct: 397 SACSQLGALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT-RN 454
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
++ + +++ HG+ A ++I+
Sbjct: 455 SLTYTAIIGGLALHGDASTAISYFNEMID 483
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 141/294 (47%), Gaps = 11/294 (3%)
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI---KPS 220
L++ +D S ++ + + N SWN I G+ + KE+ L+++M +P
Sbjct: 96 ALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPD 155
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
FT L CA L G I ++ EL + V A I M+ CG E A +VF+
Sbjct: 156 HFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD 215
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
P + L WN ++ G G +AI ++ ++S +KPD ++ I ++++C+ G +N+
Sbjct: 216 ESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNR 275
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSAC 400
K+++ + E ++ +I + ++D + G + EA ++ ++ + W +++S
Sbjct: 276 GKEFYEYVKEN-GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT-IVSWTTMISGY 333
Query: 401 RKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
+ G ++++++ + E D VL + + S Q + + L +E++
Sbjct: 334 ARCGLLDVSRKLFDDMEEKD------VVLWNAMIGGSVQAKRGQDALALFQEMQ 381
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 317/569 (55%), Gaps = 79/569 (13%)
Query: 1 MKDLKKIHAHLIKTGLAKDP--IAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNT 57
+K LK+IHA +IKT + D ++R+ A C S D YA + Q++ PNL ++N
Sbjct: 35 IKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNA 94
Query: 58 IIRGF------------------SQSSTPRNAILLFI----------------------- 76
IIRG S+ P N + F+
Sbjct: 95 IIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKM 154
Query: 77 ----DMLVTSPI-------------------QPQR--LTYPSLFKAYAQLGLARDGAQLH 111
D+ V++ + PQR +++ ++ + Y ++G AR+G L
Sbjct: 155 GLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLF 214
Query: 112 GRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL-------MFDEVDTEFDVVAWNSMIIG 164
+ + L+ D T++ + ++C L + RL + + DV N+++
Sbjct: 215 FEMCGENLQADGM---TLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDM 271
Query: 165 LAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
KCG+ + +R++F +M +N VSWNSMISG + +FKE+L +FR+MQ +KP + T+
Sbjct: 272 YLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTL 331
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
V++LN+CA LG + G+W+H +L N + + A++DMY KCG ++A VF + +
Sbjct: 332 VAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNR 391
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
K + + +M+ GLAM+G +A+ LFS + ++PD ++F+ VLTAC+H G V + + Y
Sbjct: 392 KDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKY 451
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
F M+ Y ++P ++HY CMVD LGRAGL+ EAE+ IR+MP +PDA + G+LL AC+ HG
Sbjct: 452 FEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHG 511
Query: 405 NIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
+E+ + K+I +++ + YVLMSN+Y+++ ++ +A++ R MKE +EK PGCS I
Sbjct: 512 KVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSI 571
Query: 465 EVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
E+DG +HEF G + HPK E+Y LL+++
Sbjct: 572 ELDGVIHEFQKGDKSHPKIKEIYKLLDEI 600
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 361 bits (926), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 186/502 (37%), Positives = 296/502 (58%), Gaps = 13/502 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H+ + K+ D S ++ S G++N A VF ++ N+ WN++I F Q+
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDM-YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 231
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQF 124
A+ +F M++ S ++P +T S+ A A L + G ++HGRVVK L D
Sbjct: 232 GPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII 290
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N + MYA C + EAR +FD + +V+A SMI G A +R +F KM R
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSWN++I+GY +N + +EAL LF ++ +++ P+ ++ ++L ACA L + G H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 245 NFLVTNCFELNT------IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
++ + F+ + V ++IDMY KCGC E VF + ++ WN+M+ G A
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
NGY NEA++LF + S KPD+I+ I VL+AC H+G V + + YF+ MT + + P
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
HY+CMVD LGRAG LEEA+ +I MP PD++IWGSLL+AC+ H NI + K A++++E
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 589
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
++ + S YVL+SN+YA ++E+ M R M++ + K+PGCS I++ G H F+ +
Sbjct: 590 VEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDK 649
Query: 479 LHPKAPEVYLLLNDLGLLIQEM 500
HP+ +++ LL+ +LI EM
Sbjct: 650 SHPRKKQIHSLLD---ILIAEM 668
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 167/312 (53%), Gaps = 5/312 (1%)
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
+H V+K G + FI N +I Y+ CG L + R +FD++ + ++ WNS++ GL K G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM-PQRNIYTWNSVVTGLTKLG 100
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
+DE+ LF M R+ +WNSM+SG+ ++ + +EAL F M ++ +E++ S+L+
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
AC+ L + +G +H+ + + F + + +A++DMY KCG A +VF+ + + +
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WNS++ NG EA+ +F + S ++PD ++ +V++AC + ++ +
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD----PDAIIWGSLLSACRKHGN 405
+ K++ I + VD + ++EA + SMP ++I G ++A K
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 406 IEMAKQAAKQII 417
+ K A + ++
Sbjct: 341 LMFTKMAERNVV 352
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 210/487 (43%), Gaps = 111/487 (22%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
++ +HA +IK+G + + +R++ S G + VF ++ + N++ WN+++ G +
Sbjct: 39 VRYVHASVIKSGFSNEIFIQNRLID-AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 64 QSSTPRNAILLFIDM----------LVTSPIQPQR--------------------LTYPS 93
+ A LF M +V+ Q R ++ S
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ A + L G Q+H + K D +I + ++ MY+ CG +++A+ +FDE+
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR- 216
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+VV+WN S+I+ + +N EAL++F+ M
Sbjct: 217 NVVSWN-------------------------------SLITCFEQNGPAVEALDVFQMML 245
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT-AIIDMYCKCGCP 272
E ++P E T+ S+++ACA L AI+ G+ +H +V N N I+++ A +DMY KC
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 273 ERALQVFNTVP-------------------------------KKGLSCWNSMVFGLAMNG 301
+ A +F+++P ++ + WN+++ G NG
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
EA+ LF L+ ++ P + SF +L AC + A+ + + + +K K
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKAC-----ADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 362 S----------CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
S ++D + G +EE + R M + D + W +++ ++G A +
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 412 AAKQIIE 418
++++E
Sbjct: 480 LFREMLE 486
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 227 LLNAC--AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
LL++C +KL AI ++H ++ + F + +ID Y KCG E QVF+ +P+
Sbjct: 25 LLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQ 83
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL-------------------------- 318
+ + WNS+V GL G+ +EA LF + +
Sbjct: 84 RNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMM 143
Query: 319 -KPDYI----SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGL 373
K ++ SF +VL+AC+ +N+ +L+ ++ + S +VD + G
Sbjct: 144 HKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS-PFLSDVYIGSALVDMYSKCGN 202
Query: 374 LEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ +A+++ M D + + W SL++ ++G
Sbjct: 203 VNDAQRVFDEM-GDRNVVSWNSLITCFEQNG 232
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 361 bits (926), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 303/505 (60%), Gaps = 40/505 (7%)
Query: 2 KDLKKIHAHLIKTGLAKD-PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ L +IHA ++ GL + + I + S G + YA+ +F +I KP++ I N ++R
Sbjct: 26 RTLMQIHAFMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFEEIPKPDVSICNHVLR 85
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G +QS P + L+ +M + P R T+ + KA ++L +G +HG+VV+ G
Sbjct: 86 GSAQSLKPEKTVALYTEM-EKRGVSPDRYTFTFVLKACSKLEWRSNGFAIHGKVVRHGFL 144
Query: 121 FDQFIHNTIIYMYANCGFL-------------------------------SEARLMFDEV 149
++++ N +I +ANCG L EA +FDE+
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
+ D VAWN MI G KC E+D +R LFD+ ++ V+WN+MISGYV KEAL +F
Sbjct: 205 PDK-DQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALSIF 263
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL-----VTNCFELNTIVVTAIID 264
+EM++ P T++SLL+ACA LG + G+ +H ++ V++ + T + A+ID
Sbjct: 264 KEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALID 323
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
MY KCG +RA++VF + + LS WN+++ GLA++ E ++++F +Q + P+ ++
Sbjct: 324 MYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALHHAEG-SVEMFEEMQRLKVWPNEVT 382
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
FI V+ AC+HSG+V++ + YF+LM + Y I+P+IKHY CMVD LGRAGLLEEA + SM
Sbjct: 383 FIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGLLEEAFMFVESM 442
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
+P+AI+W +LL AC+ +GN+E+ K A ++++ + K+ES YVL+SN+YA++ Q++
Sbjct: 443 KIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQ 502
Query: 445 EERLLMKEVKIEKEPGCSLIEVDGE 469
+ R + + +++K G SLIE D +
Sbjct: 503 KVRKMFDDTRVKKPTGISLIEEDDD 527
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 151/334 (45%), Gaps = 22/334 (6%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G + + +LF+++ + N ++ G +++K ++ + L+ EM+++ + P +T +L
Sbjct: 60 GALKYAHKLFEEIPKPDVSICNHVLRGSAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVL 119
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
AC+KL G IH +V + F LN V A+I + CG A ++F+ K
Sbjct: 120 KACSKLEWRSNGFAIHGKVVRHGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
W+SM G A G +EA++LF + D +++ ++T C +++ A++ F
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPDK----DQVAWNVMITGCLKCREMDSARELFDRF 235
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLLSACRKHGN 405
TE + ++ M+ G +EA + + M PD + SLLSAC G+
Sbjct: 236 TE-----KDVVTWNAMISGYVNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 406 IEMAKQAAKQIIELDKNESCGYV------LMSNLYAASYQFEEAMEERLLMKEVKIEKEP 459
+E K+ I+E S YV + ++YA + A+E MK+ +
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRDLSTWN 350
Query: 460 ----GCSLIEVDGEVHEFVAGGRLHPKAPEVYLL 489
G +L +G V F RL EV +
Sbjct: 351 TLIVGLALHHAEGSVEMFEEMQRLKVWPNEVTFI 384
>gi|334187520|ref|NP_001190262.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
gi|223635618|sp|P0C8Q7.1|PP369_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08305
gi|332003897|gb|AED91280.1| pentatricopeptide repeat (PPR) family protein [Arabidopsis
thaliana]
Length = 534
Score = 360 bits (925), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 189/498 (37%), Positives = 306/498 (61%), Gaps = 7/498 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +L KIH LI GL+++ S+ L+F S +GD++YAY +++ P + WN +I
Sbjct: 21 MSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVI 80
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGFS S P +I ++I ML + P +TYP L K+ ++L + G LH VVK GL
Sbjct: 81 RGFSNSRNPEKSISVYIQMLRFG-LLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGL 139
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E+D FI NT+I+MY + + AR +FDE+ + ++V WNS++ AK G++ +R +FD
Sbjct: 140 EWDLFICNTLIHMYGSFRDQASARKLFDEMPHK-NLVTWNSILDAYAKSGDVVSARLVFD 198
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIR 238
+M R+ V+W+SMI GYV+ ++ +ALE+F +M + K +E TMVS++ ACA LGA+
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALN 258
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF--NTVPKKGLSCWNSMVFG 296
+G+ +H +++ L I+ T++IDMY KCG A VF +V + WN+++ G
Sbjct: 259 RGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGG 318
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA +G+ E+++LF ++ S + PD I+F+ +L AC+H G V +A +F + E+ +P
Sbjct: 319 LASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEP 377
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+HY+CMVD L RAGL+++A I MP P + G+LL+ C HGN+E+A+ K++
Sbjct: 378 KSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKL 437
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
IEL + YV ++N+YA + QF A R M++ ++K G S++++DG H F+A
Sbjct: 438 IELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAH 497
Query: 477 GRLHPKAPEVYLLLNDLG 494
+ H + ++Y +L G
Sbjct: 498 DKTHFHSDKIYAVLQLTG 515
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 360 bits (924), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 179/490 (36%), Positives = 305/490 (62%), Gaps = 4/490 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H IK+ + D A+ ++ C GD++ A VFT IK+ ++ WN++I GF Q
Sbjct: 153 QSLHGMAIKSAVGSDVFVANSLI-HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 211
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+P A+ LF M + ++ +T + A A++ G ++ + + + +
Sbjct: 212 KGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLT 270
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MY CG + +A+ +FD ++ E D V W +M+ G A + + +R + + M +
Sbjct: 271 LANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNAMPKK 329
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+ V+WN++IS Y +N K EAL +F E+Q ++NIK ++ T+VS L+ACA++GA+ G WI
Sbjct: 330 DIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWI 389
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H+++ N ++N V +A+I MY KCG E+A +VFN+V K+ + W++M+ GLAM+G
Sbjct: 390 HSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCG 449
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+EA+ +F +Q +N+KP+ ++F V AC+H+G V++A+ F M +Y I P KHY+C
Sbjct: 450 SEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYAC 509
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+VD LGR+G LE+A K I +MP P +WG+LL AC+ H N+ +A+ A +++EL+
Sbjct: 510 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRN 569
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
+VL+SN+YA S +++ E R M+ ++KEPGCS IE+DG +HEF++G HP +
Sbjct: 570 DGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMS 629
Query: 484 PEVYLLLNDL 493
+VY L+++
Sbjct: 630 EKVYGKLHEV 639
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 214/438 (48%), Gaps = 68/438 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ LK+ HAH+I+TG+ DP +AS++ A S + YA VF +I +PN F WNT+I
Sbjct: 44 LRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLI 103
Query: 60 RGFSQSSTPRNAILLFIDMLVT-SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
R ++ P +I F+DM+ + S P + T+P L KA A++ G LHG +K
Sbjct: 104 RAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSA 163
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ D F+ N++I+ Y +CG L A +F + E DVV+WNSMI G + G D
Sbjct: 164 VGSDVFVANSLIHCYFSCGDLDSACKVFTTI-KEKDVVSWNSMINGFVQKGSPD------ 216
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+ALELF++M+ +++K S TMV +L+ACAK+ +
Sbjct: 217 -------------------------KALELFKKMESEDVKASHVTMVGVLSACAKIRDLE 251
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF------------------- 279
G + +++ N +N + A++DMY KCG E A ++F
Sbjct: 252 FGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 311
Query: 280 ------------NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYISFI 326
N +PKK + WN+++ NG NEA+ +F LQ N+K + I+ +
Sbjct: 312 ISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLV 371
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+ L+AC G + + + + + IK + S ++ + G LE+A ++ S+
Sbjct: 372 STLSACAQVGALELGRWIHSYIKKN-GIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEK 430
Query: 387 DPDAIIWGSLLSACRKHG 404
D +W +++ HG
Sbjct: 431 R-DVFVWSAMIGGLAMHG 447
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 149/298 (50%), Gaps = 10/298 (3%)
Query: 162 IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM--QEQNIKP 219
I L+ ++ +R++FD++ N+ +WN++I Y ++ F +M E P
Sbjct: 72 IAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYP 131
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
+++T L+ A A++ ++ G+ +H + + + V ++I Y CG + A +VF
Sbjct: 132 NKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 191
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
T+ +K + WNSM+ G G ++A++LF ++S ++K +++ + VL+AC +
Sbjct: 192 TTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLE 251
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ + + E ++ ++ + M+D + G +E+A++L +M + D + W ++L
Sbjct: 252 FGRRVCSYIEEN-RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM-EEKDNVTWTTMLDG 309
Query: 400 CRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK 457
+ E A++ + + D V + L +A Q + E L+ E++++K
Sbjct: 310 YAISEDYEAAREVLNAMPKKD------IVAWNALISAYEQNGKPNEALLVFHELQLQK 361
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 187/493 (37%), Positives = 303/493 (61%), Gaps = 16/493 (3%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKK-PNLFIWNTIIRGFSQSST-P 68
++ L D + SR + C+S G +YAY +FT I P+++++N II+ S S T P
Sbjct: 1 MLLRALDTDNLLLSRFIHACSS-LGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHP 59
Query: 69 RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNT 128
+ +I L+ ++ + ++P ++P KA + + G QLH + ++ GL D +
Sbjct: 60 KASIFLYNNIQLAG-LRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTA 118
Query: 129 IIYMYAN--CGFLSEARLMFDEVD-TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ MY++ G + +AR MFD + + DV WN+M+ G AK G++ +R LF++M RN
Sbjct: 119 FVQMYSSFGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRN 178
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
+SW ++I+GY + + +A+ LFR MQ +N++P E M+ L ACA+LGA+ GEWI +
Sbjct: 179 VISWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRH 238
Query: 246 F-----LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ L+T LN A+IDMY K G + ALQVF + K + W +M+ GLA++
Sbjct: 239 YIDRLGLLTTNIPLNN----ALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALH 294
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA+++FS ++ + +KP+ I+FIA+L+AC+H G V + YF M Y I+P I+H
Sbjct: 295 GLGTEALEMFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEH 354
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CM+D LGRAG L+EA+ L+ MP +P+A+IWGSLL+AC HG+ E+ + A + ++EL+
Sbjct: 355 YGCMIDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELE 414
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ S Y L+SN+YA+ ++ E+ R +M + ++K PG SLIEV+ VHEF+AG H
Sbjct: 415 PDNSGNYALLSNIYASRGRWNESRVVRKVMWDAGVKKMPGGSLIEVNNRVHEFIAGEISH 474
Query: 481 PKAPEVYLLLNDL 493
+ + +L+ +
Sbjct: 475 SQFDRIQEVLSKI 487
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
I ++ + GL I + L + +GDI A VF + + W T+I G +
Sbjct: 236 IRHYIDRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHG 295
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQFI 125
A+ +F M + ++P +T+ ++ A + +GL + G R++ + G+E
Sbjct: 296 LGTEALEMFSRM-ERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEH 354
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
+ +I + G L EA+ + ++ E + V W S+ LA C
Sbjct: 355 YGCMIDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSL---LAAC 394
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 191/561 (34%), Positives = 312/561 (55%), Gaps = 69/561 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIK-KPNLFIWNTII 59
++ LK+IHAHLI +GL D S++ F G ++YA+ Q +NT+I
Sbjct: 18 IRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQTDLHVGTLPYNTLI 77
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
++ S TP+ A L++ +V + P T+P + KA + ++G Q+HG VK G
Sbjct: 78 AAYASSCTPKAAFLVY-GRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGF 136
Query: 120 EFDQFIHNTIIYM-------------------------------YANCGFLSEARLMFDE 148
D ++ N++++ Y G EA +F +
Sbjct: 137 LCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLK 196
Query: 149 VDTEFDVVAWNSMI-------------------------IGLA----------KCGEIDE 173
+D +V + S++ IGL KC + E
Sbjct: 197 MDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCE 256
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R+LFD++ R+ VSW S+ISG V+ + K++LELF +MQ ++P + S+L+ACA
Sbjct: 257 ARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACAS 316
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LGA+ G W+ ++ E + + TA++DMY KCGC E AL +FN +P + + WN++
Sbjct: 317 LGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNAL 376
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF-TLMTETY 352
+ GLAM+G+ +EA+K F + + ++P+ ++F+A+LTAC HSG V + + YF ++++ +
Sbjct: 377 LGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPF 436
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
P ++HY CM+D L RAGLL+EA K IR+MP PD +IWG+LLSAC+ +GN+E++++
Sbjct: 437 NFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEI 496
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
++EL +S YVL+SN+YA + ++++ R LMK+ I K PG S+IEVDGE HE
Sbjct: 497 LSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVDGEAHE 556
Query: 473 FVAGGRLHPKAPEVYLLLNDL 493
F+ G H + ++++LLN L
Sbjct: 557 FLVGDTNHSRNEDIHILLNIL 577
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 187/489 (38%), Positives = 305/489 (62%), Gaps = 5/489 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKP-NLFIWNTII 59
+K L + HA ++ L D + S + +S G YAY +FT + P N+F++NTII
Sbjct: 24 LKHLHQTHAFMLCRALDHDNLLLSLFIQ-SSSSLGFSLYAYSLFTSLTHPPNIFLYNTII 82
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R S S P +I LF + + ++ ++P ++P KA +L + G Q H + ++ GL
Sbjct: 83 RALSLSPQPSLSIFLF-NRIQSARLRPDSYSFPFALKAVIRLSATKTGLQFHSQAIRFGL 141
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVD-TEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ ++I MY++ +S+AR +FD + T +V WN+M+ AK ++ ++ LF
Sbjct: 142 HSHLHVLVSLIRMYSS-SHISDARKLFDGIPLTARNVALWNAMLTSYAKICDMPNAQHLF 200
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D M RN +SW ++ISGY + +A+ +FR MQ QN+ P E T++++L+ACA+LGA+
Sbjct: 201 DSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQLQNVVPDEITLLAVLSACAQLGALE 260
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
GEWI N++ + N + A+IDMY K G +RAL +F ++ K + W +M+ GLA
Sbjct: 261 LGEWIRNYIDIHGLHRNVPLHNALIDMYAKSGNIKRALLIFESMKHKTIVTWTTMIAGLA 320
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G +A+++FS ++ +KP+ I+FIAVL+AC+H G V A+ +FT M Y I+P I
Sbjct: 321 LHGLGTQALEMFSRMERDRVKPNEITFIAVLSACSHVGLVQLARSFFTNMRSRYTIQPKI 380
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CM+D LGRAG L+EA++L++ MP +P+A IWGSLL+A HG+ + ++ K +IE
Sbjct: 381 EHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAIWGSLLAASYTHGDAMLGERTLKHLIE 440
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ N S Y L+SN+YA+ +++ + R +M++ ++K PG S IEV+ V+EF+AG
Sbjct: 441 LEPNNSGNYALLSNIYASLGRWKASRIVRKMMRDRGVKKIPGGSFIEVNNRVNEFIAGET 500
Query: 479 LHPKAPEVY 487
HP+ E+Y
Sbjct: 501 SHPQFDEIY 509
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/496 (37%), Positives = 298/496 (60%), Gaps = 4/496 (0%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H IK D + ++ F GD++ A +F I ++ WN++I F+Q +
Sbjct: 148 VHGMAIKLSFGMDLYILNSLVRF-YGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGN 206
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
P +A+ LF+ M + P +T + A A+ G + + ++G++ D +
Sbjct: 207 CPEDALELFLKM-ERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLC 265
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N ++ MY CG + +A+ +FDE+ E DV +W M+ G AK G+ D +R +F+ M +
Sbjct: 266 NAMLDMYTKCGSVDDAQKLFDEM-PERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEI 324
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNI-KPSEFTMVSLLNACAKLGAIRQGEWIHN 245
+WN +IS Y +N K KEAL +F E+Q I KP E T+VS L+ACA+LGAI G WIH
Sbjct: 325 AAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHV 384
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ LN ++++++DMY KCG E+AL+VF +V ++ + W++M+ GL M+G
Sbjct: 385 YIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKA 444
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AI LF +Q + +KP+ ++F VL AC+H+G V++ + +F M Y + P +KHY+CMV
Sbjct: 445 AIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMV 504
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAG LEEA +LI M + P A +WG+LL AC H N+E+ + A+ Q+++L+
Sbjct: 505 DILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHG 564
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
VL+SN+YA + ++E+ E R LM++ +++KEPGCS IE +G VHEF+ G HP +
Sbjct: 565 AIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSN 624
Query: 486 VYLLLNDLGLLIQEMG 501
+Y L ++ ++ +G
Sbjct: 625 IYSKLEEIATKLKSVG 640
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 218/436 (50%), Gaps = 67/436 (15%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K LK++HA +++TGL DP +AS++ A S ++YA +F QI +PNL+ WNT+IR
Sbjct: 39 KQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIR 98
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++ SS P + ++F+D+L P + T+P + KA ++L +R G +HG +K
Sbjct: 99 AYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFG 158
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D +I N+++ Y CG LS A +F + + DVV+WNSMI A+ G E
Sbjct: 159 MDLYILNSLVRFYGACGDLSMAERLFKGISCK-DVVSWNSMISAFAQ-GNCPE------- 209
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ALELF +M+ +N+ P+ TMV +L+ACAK + G
Sbjct: 210 -----------------------DALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFG 246
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGC-----------PER--------------- 274
W+ +++ +++ + A++DMY KCG PER
Sbjct: 247 RWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKM 306
Query: 275 -----ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL-KPDYISFIAV 328
A VFN +P K ++ WN ++ NG EA+ +F+ LQ S + KPD ++ ++
Sbjct: 307 GDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVST 366
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC G ++ + + + I + S +VD + G LE+A ++ S+ +
Sbjct: 367 LSACAQLGAIDLG-GWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSV-EER 424
Query: 389 DAIIWGSLLSACRKHG 404
D +W ++++ HG
Sbjct: 425 DVYVWSAMIAGLGMHG 440
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 297/483 (61%), Gaps = 11/483 (2%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+DL ++H H+++ +++ A++I+ C + + +A VF Q++ PNL + N +I+
Sbjct: 28 RDLLRVHGHVVRLRISQSSYLATQIVHLCNAHR-RVTHAARVFAQVRDPNLHLHNAMIKA 86
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQP-------QRLTYPSLFKAYAQLGLARDGAQLHGRV 114
++Q+ R+A+ ++I ML P P R TYP L KA G Q+H V
Sbjct: 87 YAQNHQHRDAVAVYIRML-RCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHV 145
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
V+ G + + N++I MY G L+ A +FDE+ E DVV+WN +I A+ G++ ++
Sbjct: 146 VRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM-RERDVVSWNMLISAHARLGQMRKA 204
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
LF+ M + V+W +M+SGY + A++ FR MQ + +P + ++V++L ACA+L
Sbjct: 205 TALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQL 264
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA+ G WI+ + + +T + A+++MY KCGC ++ALQ+F+ + K + W++++
Sbjct: 265 GALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVI 324
Query: 295 FGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
GLA +G +EA+ LF+ ++ ++P+ I+F+ +L+AC+++G V++ +F M + Y
Sbjct: 325 GGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYG 384
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
++P ++HY C+VD LGR+G + A L+R MP DA +WGSLLSACR HG+++ A AA
Sbjct: 385 VEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAVLAA 444
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
++++EL+ ++ V+++N+YAA+ ++ + R ++ + K PGCSLIEV V EF
Sbjct: 445 ERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREF 504
Query: 474 VAG 476
VAG
Sbjct: 505 VAG 507
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 169/483 (34%), Positives = 297/483 (61%), Gaps = 11/483 (2%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+DL ++H H+++ +++ A++I+ C + + +A VF Q++ PNL + N +I+
Sbjct: 28 RDLLRVHGHVVRLRISQSSYLATQIVHLCNAHR-RVTHAARVFAQVRDPNLHLHNAMIKA 86
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQP-------QRLTYPSLFKAYAQLGLARDGAQLHGRV 114
++Q+ R+A+ ++I ML P P R TYP L KA G Q+H V
Sbjct: 87 YAQNHQHRDAVAVYIRML-RCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHV 145
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
V+ G + + N++I MY G L+ A +FDE+ E DVV+WN +I A+ G++ ++
Sbjct: 146 VRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM-RERDVVSWNMLISAHARLGQMRKA 204
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
LF+ M + V+W +M+SGY + A++ FR MQ + +P + ++V++L ACA+L
Sbjct: 205 TALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQL 264
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA+ G WI+ + + +T + A+++MY KCGC ++ALQ+F+ + K + W++++
Sbjct: 265 GALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVI 324
Query: 295 FGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
GLA +G +EA+ LF+ ++ ++P+ I+F+ +L+AC+++G V++ +F M + Y
Sbjct: 325 GGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYG 384
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
++P ++HY C+VD LGR+G + A L+R MP DA +WGSLLSACR HG+++ A AA
Sbjct: 385 VEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAVLAA 444
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
++++EL+ ++ V+++N+YAA+ ++ + R ++ + K PGCSLIEV V EF
Sbjct: 445 ERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREF 504
Query: 474 VAG 476
VAG
Sbjct: 505 VAG 507
>gi|356514477|ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 526
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/502 (37%), Positives = 299/502 (59%), Gaps = 11/502 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAF--CTSPAGDINYAYLVFTQIKKPNLFIWNTI 58
+ LK++HAH+++ + P A + +L+ ++ A +YA +F + N F+ NT+
Sbjct: 18 LTQLKQLHAHILRCRINDTPYALAPLLSVLATSNDASFFSYARSIFRHLTNRNTFMHNTM 77
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD----GAQLHGRV 114
IRG+ Q +P +A+ ++ ML + + T+P L KA L + G +HG V
Sbjct: 78 IRGYLQCRSPLHAVSCYLSML-QNGVAVNNYTFPPLIKACIALLPSSPSNIVGRLVHGHV 136
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
VK GL D ++ + I Y+ + AR++FDE + DVV +M+ G K G + +
Sbjct: 137 VKFGLRNDPYVVSAFIEFYSVSREVDTARVLFDETSYK-DVVLGTAMVDGYGKMGNVKSA 195
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R +FDKM RN VSW++M++ Y R FKE L LF EMQ + +P+E +V++L ACA L
Sbjct: 196 REVFDKMPERNAVSWSAMMAAYSRVSDFKEVLALFTEMQNEGTEPNESILVTVLTACAHL 255
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA+ QG W+H++ E N I+ TA++DMY KCGC E AL VF+ + K WN+M+
Sbjct: 256 GALTQGLWVHSYARRFHLESNPILATALVDMYSKCGCVESALSVFDCIVDKDAGAWNAMI 315
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G A+NG ++++LF + +S KP+ +F+AVLTAC H+ V Q F M+ Y +
Sbjct: 316 SGEALNGDAGKSLQLFRQMAASRTKPNETTFVAVLTACTHAKMVQQGLWLFEEMSSVYGV 375
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMP---SDPDAIIWGSLLSACRKHGNIEMAKQ 411
P ++HY+C++D L RAG++EEAEK + + DA +WG+LL+ACR H NI + +
Sbjct: 376 VPRMEHYACVIDLLSRAGMVEEAEKFMEEKMGGLTAGDANVWGALLNACRIHKNIHVGNR 435
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
K+++++ + +VL N+Y + EA + R ++EV ++K+PGCS+IEVD EV
Sbjct: 436 VWKKLVDMGVTDCGTHVLTYNIYREAGWDVEANKVRSRIEEVGMKKKPGCSIIEVDNEVE 495
Query: 472 EFVAGGRLHPKAPEVYLLLNDL 493
EF+AG HP+A E+ LL+ +
Sbjct: 496 EFLAGDHSHPQAQEMCKLLDSI 517
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/503 (38%), Positives = 301/503 (59%), Gaps = 17/503 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKD-----PIAASRILAFCTSPAGDINYAYLVFTQIKK-PNLFI 54
+ +K+IHA ++ GLA++ P+ S I ++++A +VF Q P I
Sbjct: 68 LTQIKQIHAQVVTHGLAQNTSLLGPLIHSYI------GCRNLSFARIVFDQFPSLPPTII 121
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTS-PIQPQRLTYPSLFKAYAQLGLARD-GAQLHG 112
WN +I+ +S++ + + ++ LF ML P + T+ +F A ++ R G +HG
Sbjct: 122 WNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHG 181
Query: 113 RVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID 172
VVK G E D F+ N+++ MY+ + +A+ +FDE+ + DV+ W S++ G A GE+
Sbjct: 182 MVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEM-PQRDVITWTSVVKGYAMRGELV 240
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNAC 231
+R LFD M RN VSW M++GYV + + EAL+ F +M +KP+E +VS+L+AC
Sbjct: 241 RARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSAC 300
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A LGA+ QG+WIH ++ N L++ + TA+IDMY KCG + A +VF+ + K+ L W
Sbjct: 301 AHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWT 360
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
SM+ GL+M+G E + FS + + KPD I+ + VL C+HSG V + F M
Sbjct: 361 SMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPL 420
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ I P ++HY C++D LGRAG LE A + I+SMP +PD + W +LLSACR HG++++ ++
Sbjct: 421 WGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGER 480
Query: 412 AAKQIIEL-DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
I EL + GYVL+SNLYA+ Q+E + R M + E PGCS IE+DG V
Sbjct: 481 IINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCPGCSWIEIDGVV 540
Query: 471 HEFVAGGRLHPKAPEVYLLLNDL 493
HEF+A +LHP+ E+ LN++
Sbjct: 541 HEFLAADKLHPRISEINKKLNEV 563
>gi|357519199|ref|XP_003629888.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355523910|gb|AET04364.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 515
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 191/506 (37%), Positives = 301/506 (59%), Gaps = 11/506 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
MK K+IHAH I L + +SRILAF SP GD YA +FT I PN+F +N+II
Sbjct: 1 MKQTKQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSII 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
++ +S +F ML T+ I+P T+ +L KA L Q+ +K G
Sbjct: 61 TSYTTNSQFHKLFFVFTKMLNTN-IRPNSHTFTTLVKACVSLSSLE---QVFTLSMKLGN 116
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D + +++I ++ + AR +FDE +VV W S++ G CG ++E+R +FD
Sbjct: 117 SSDVYFVSSVINAFSKHSAIHLARQVFDECSNR-NVVCWTSLVSGYCSCGLVNEARDVFD 175
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-----IKPSEFTMVSLLNACAKL 234
KM RN S+++M+SGYVRN F E ++LFRE+++++ +K + +VS+LNAC +
Sbjct: 176 KMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMV 235
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA +G+WIH+++ N E + + TA+ID Y KCG + A +VFN +P K ++ W++M+
Sbjct: 236 GAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMI 295
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLA+NG A++LF ++ KP+ ++F+ VLTACNH ++ F +M+E Y I
Sbjct: 296 LGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNI 355
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
PSI+HY C+VD L R+G +++A I SM +PD IWGSLL+ C HG+ E+ ++ K
Sbjct: 356 TPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGK 415
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+IE + S YVL++N+YA ++E E R LMK+ + G S IE+D +H+F
Sbjct: 416 YLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKFF 475
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEM 500
A + + E+Y +L+ LG ++++
Sbjct: 476 ADDKCCLYSREIYDVLSHLGKKVEDI 501
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/480 (36%), Positives = 304/480 (63%), Gaps = 6/480 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++ +K+HA ++KTGL DP + + + G + VF ++ + WN +I
Sbjct: 124 VREGEKVHAFVVKTGLEFDPYVCNSFMDM-YAELGLVEGFTQVFEEMPDRDAVSWNIMIS 182
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ + A+ ++ M S +P T S A A L G ++H + + L+
Sbjct: 183 GYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIASE-LD 241
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N ++ MY CG +S AR +FD + + +V W SM+ G CG++D++R LF++
Sbjct: 242 LTTIMGNALLDMYCKCGHVSVAREIFDAMTVK-NVNCWTSMVTGYVICGQLDQARNLFER 300
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
SR+ V W +MI+GYV+ +F+E + LF EMQ + +KP +F +V+LL CA+ GA+ QG
Sbjct: 301 SPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQG 360
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+WIHN++ N +++ +V TA+I+MY KCGC E++ ++FN + +K + W S++ GLAMN
Sbjct: 361 KWIHNYIDENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMN 420
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G +EA++LF +Q+ LKPD I+F+AVL+AC+H+G V + + F M+ Y I+P+++H
Sbjct: 421 GKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEH 480
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAII---WGSLLSACRKHGNIEMAKQAAKQII 417
Y C +D LGRAGLL+EAE+L++ +P+ + II +G+LLSACR +GNI+M ++ A +
Sbjct: 481 YGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALA 540
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
++ ++S + L++++YA++ ++E+ + R MK++ I+K PG S IEVDG+ + ++ G
Sbjct: 541 KVKSSDSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIEVDGKWQQRLSEG 600
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 214/437 (48%), Gaps = 69/437 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+I AH+ GL +D ++++AF S GD NYA +F I P+LFI+N +I
Sbjct: 21 MSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFNYIHDPSLFIYNLMI 80
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ F +S + R+AI LF L + P TYP + K +G R+G ++H VVK GL
Sbjct: 81 KAFVKSGSFRSAISLF-QQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKVHAFVVKTGL 139
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
EFD ++ N+ + MYA G + +F+E+ + D V+WN MI G
Sbjct: 140 EFDPYVCNSFMDMYAELGLVEGFTQVFEEM-PDRDAVSWNIMISG--------------- 183
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIR 238
YVR +F+EA++++R M E N KP+E T+VS L+ACA L +
Sbjct: 184 ----------------YVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLE 227
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+ IH+++ + +L TI+ A++DMYCKCG A ++F+ + K ++CW SMV G
Sbjct: 228 LGKEIHDYIASE-LDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYV 286
Query: 299 --------------------------MNGYEN-----EAIKLFSGLQSSNLKPDYISFIA 327
+NGY E I LF +Q +KPD +
Sbjct: 287 ICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVT 346
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
+LT C SG + Q K + E +IK + +++ + G +E++ ++ + +
Sbjct: 347 LLTGCAQSGALEQGKWIHNYIDEN-RIKVDAVVGTALIEMYAKCGCIEKSFEIFNGL-KE 404
Query: 388 PDAIIWGSLLSACRKHG 404
D W S++ +G
Sbjct: 405 KDTTSWTSIICGLAMNG 421
>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
Length = 719
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/525 (35%), Positives = 299/525 (56%), Gaps = 37/525 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +IHA +I L+ + +++++ +S IN++ VF K NLF +N +IRG +
Sbjct: 97 LHQIHAQIIIHNLSSSSLITTQLIS-SSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLT 155
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+S NAI F +++ S I+P RLTYP + K+ A L G +H +++ G+E D
Sbjct: 156 TNSHFFNAIFHF-RLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDS 214
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDV---------------------------- 155
F+ +++ MY L A +FDE FD
Sbjct: 215 FVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFK 274
Query: 156 -------VAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
V+W+++I G AK G++D + LFD+M +N VSW +M+ G+ RN ++AL +
Sbjct: 275 AMPKKENVSWSTLIDGFAKNGDMDRAMELFDQMPEKNVVSWTTMVDGFSRNGDSEKALSM 334
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
F +M E+ ++P+ FT+VS L+ACAK+G + G IH ++ N L + TA++DMY K
Sbjct: 335 FSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAK 394
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG E A +VF +K + W M++G A++G+ +AI F + + +KPD + F+A+
Sbjct: 395 CGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLAL 454
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
LTAC HSG+V+ ++F M Y I+PS+KHY+ +VD LGR+G L+EA + I MP +P
Sbjct: 455 LTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERMPMNP 514
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D +IWG+L ACR H +MAK A ++++L+ + Y+ +SN YAA Q+E+A R+
Sbjct: 515 DFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLSNAYAALGQWEDAERVRV 574
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
LM+ + K G S IEV+G+VH FV+G H + + L L ++
Sbjct: 575 LMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLEEI 619
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 358 bits (919), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 190/504 (37%), Positives = 293/504 (58%), Gaps = 9/504 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M LK+I A+ ++ G+ I++ P+ I YA+ +F I KP +F++N +I+
Sbjct: 1 MNRLKQIQAYTLRNGIEH---TKQLIVSLLQIPS--IPYAHKLFDFIPKPTVFLYNKLIQ 55
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+S L+ M + P ++ LF A A L + G LH VK G
Sbjct: 56 AYSSHGPHHQCFSLYTQMCLQG-CSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFG 114
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F ++ MYA G LS AR FDE+ T DV WNSMI G A+CG+++ + LF
Sbjct: 115 CDVFALTALVDMYAKLGLLSLARKQFDEM-TVRDVPTWNSMIAGYARCGDLEGALELFRL 173
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-IKPSEFTMVSLLNACAKLGAIRQ 239
M +RN SW +MISGY +N ++ +AL +F M+E+ ++P+E T+ S+L ACA LGA+
Sbjct: 174 MPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEV 233
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLA 298
GE I + N + N V A+++MY +CG ++A VF + ++ L WNSM+ GLA
Sbjct: 234 GERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLA 293
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G +EAI+LF + PD ++F+ VL AC H G V + + +F M + I P +
Sbjct: 294 VHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKL 353
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD LGRAG L EA LI MP +PD+++WG+LL AC HG++E+A++AA + E
Sbjct: 354 EHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFE 413
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ + YV++SN+YA + +++ R LMK KI K G S IE G +H+F+ R
Sbjct: 414 LEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAGYSFIEEGGHIHKFIVEDR 473
Query: 479 LHPKAPEVYLLLNDLGLLIQEMGS 502
H ++ E+Y LL+++ + ++ G+
Sbjct: 474 SHSRSDEIYALLDEVSMKMKLHGN 497
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 191/526 (36%), Positives = 300/526 (57%), Gaps = 34/526 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTII 59
+ K+IHA+++K GL DP A ++L C D ++YA +F P++F+ NT+I
Sbjct: 18 LTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYTPNPDVFMHNTLI 77
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG +S P++++L FI+M S P ++ + KA A L R G QLH + + GL
Sbjct: 78 RGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGL 137
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ F+ T+I MY CGF+ AR +FDE+ E + +AWN+M+ + G++ R LFD
Sbjct: 138 DTHLFVGTTLISMYGECGFVGFARKVFDEM-PEPNAIAWNAMVTACCRGGDMKGGRELFD 196
Query: 180 KMVSRNTVSWNSMISGYVR-------------------------------NVKFKEALEL 208
M RN +SWN M++GY + N F+EA
Sbjct: 197 LMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVSWSTMIVGFAHNGYFEEAFSF 256
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
FRE+Q + ++P+E ++ +L+ACA+ GA+ G+ +H F+ + V A++D Y K
Sbjct: 257 FRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSK 316
Query: 269 CGCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIA 327
CG A VF + ++ + W SM+ LAM+G+ EAI +F ++ S ++PD I+FI+
Sbjct: 317 CGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFIS 376
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
+L AC+H+G V Q +YF M Y I+PSI+HY CMVD GRAG L++A + + MP
Sbjct: 377 LLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIP 436
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEER 447
AIIW +LL AC HG++++A+Q +++ ELD N S +VL+SN YA + ++++A R
Sbjct: 437 CTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVR 496
Query: 448 LLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
M E +I K PG S+IEVD ++ F+AG + + E Y L ++
Sbjct: 497 RSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEEAYKKLKEI 542
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 296/483 (61%), Gaps = 11/483 (2%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+DL ++H H+++ +++ A++I+ C + + +A VF Q++ PNL + N +I+
Sbjct: 28 RDLLRVHGHVVRLRISQSSYLATQIVHLCNAHR-RVTHAARVFAQVRDPNLHLHNAMIKA 86
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQP-------QRLTYPSLFKAYAQLGLARDGAQLHGRV 114
++Q+ R+A+ ++I ML P P R TYP L KA G Q+H V
Sbjct: 87 YAQNHQHRDAVAVYIRML-RCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHV 145
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
V+ G + + N++I MY G L+ A +FDE+ E DVV+WN +I A+ G++ ++
Sbjct: 146 VRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM-RERDVVSWNMLISAHARLGQMRKA 204
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
LF+ M + V+W +M+SGY + A++ FR MQ + +P + ++V++L ACA+L
Sbjct: 205 TALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQL 264
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G + G WI+ + + +T + A+++MY KCGC ++ALQ+F+ + K + W++++
Sbjct: 265 GTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVI 324
Query: 295 FGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
GLA +G +EA+ LF+ ++ ++P+ I+F+ +L+AC+++G V++ +F M + Y
Sbjct: 325 GGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYG 384
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
++P ++HY C+VD LGR+G + A L+R MP DA +WGSLLSACR HG+++ A AA
Sbjct: 385 VEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAVLAA 444
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
++++EL+ ++ V+++N+YAA+ ++ + R ++ + K PGCSLIEV V EF
Sbjct: 445 ERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREF 504
Query: 474 VAG 476
VAG
Sbjct: 505 VAG 507
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 358 bits (918), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 186/488 (38%), Positives = 285/488 (58%), Gaps = 34/488 (6%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
KIH ++K G D + ++ + G + A+ VF I N+ W II G+
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLVCL-YAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGV 191
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
R AI +F +L + + P T + A QLG G +H +++ G+ + F+
Sbjct: 192 GKFREAIDMFRRLLEMN-LAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFV 250
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+++ MYA KCG ++++R +FD M ++
Sbjct: 251 GTSLVDMYA--------------------------------KCGNMEKARSVFDGMPEKD 278
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSW +MI GY N KEA++LF +MQ +N+KP +T+V +L+ACA+LGA+ GEW+
Sbjct: 279 IVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSG 338
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+ N F N ++ TA+ID+Y KCG RA +VF + +K WN+++ GLAMNGY
Sbjct: 339 LVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKI 398
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
+ LF ++ +KPD +FI +L C H+G V++ + YF M + + PSI+HY CMV
Sbjct: 399 SFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMV 458
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAGLL+EA +LIR+MP + +AI+WG+LL ACR H + ++A+ A KQ+IEL+ S
Sbjct: 459 DLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSG 518
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL+SN+Y+A+ +++EA + RL M E +I+K PGCS IEVDG VHEF+ G + HP + +
Sbjct: 519 NYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEK 578
Query: 486 VYLLLNDL 493
+Y L++L
Sbjct: 579 IYAKLDEL 586
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 219/419 (52%), Gaps = 42/419 (10%)
Query: 13 KTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAI 72
+ GL D + IL C+ D NY +F QIK+PN+F+WNT+IRG + +AI
Sbjct: 39 RFGLCHDNYLLNMILR-CSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAI 97
Query: 73 LLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYM 132
F ++ + P T+P + KA A+L + G ++H VVK G + D F+ +++ +
Sbjct: 98 E-FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCL 156
Query: 133 YANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
YA CG+L +A +FD++ + +VV+W ++I
Sbjct: 157 YAKCGYLEDAHKVFDDIPDK-NVVSWTAII------------------------------ 185
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
SGY+ KF+EA+++FR + E N+ P FT+V +L+AC +LG + GEWIH ++
Sbjct: 186 -SGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGM 244
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
N V T+++DMY KCG E+A VF+ +P+K + W +M+ G A+NG EAI LF
Sbjct: 245 VRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQ 304
Query: 313 LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-YKIKPSIKHYSCMVDALGRA 371
+Q N+KPD + + VL+AC G + + L+ + P + + ++D +
Sbjct: 305 MQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLG--TALIDLYAKC 362
Query: 372 GLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA----KQAAKQIIELDKNESCG 426
G + A ++ + M + D ++W +++S +G ++++ Q K I+ D N G
Sbjct: 363 GSMSRAWEVFKGM-KEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIG 420
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 191/509 (37%), Positives = 310/509 (60%), Gaps = 16/509 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL--AFCTSPAGDINYAYLVFTQIKKPNLFIWNTI 58
M+ +K+ HA LI T L P++A+++L A C S ++YA+ +F QI +P+LFI+NT+
Sbjct: 29 MQQIKQTHAQLITTALISHPVSANKLLKLAACAS----LSYAHKLFDQIPQPDLFIYNTM 84
Query: 59 IRGFSQS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
I+ S S + N++++F + + P R ++ F A ++G Q+ VK
Sbjct: 85 IKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKV 144
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GLE + F+ N +I MY G + E++ +F + + D+ +WN++I G + ++ L
Sbjct: 145 GLENNVFVVNALIGMYGKWGLVGESQKVF-QWAVDRDLYSWNTLIAAYVGSGNMSLAKEL 203
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD M R+ VSW+++I+GYV+ F EAL+ F +M + KP+E+T+VS L AC+ L A+
Sbjct: 204 FDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVAL 263
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF-NTVPKKGLSCWNSMVFG 296
QG+WIH ++ ++N ++ +IIDMY KCG E A +VF K+ + WN+M+ G
Sbjct: 264 DQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGG 323
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
AM+G NEAI +F ++ + P+ ++FIA+L AC+H V + K YF LM Y I P
Sbjct: 324 FAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITP 383
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
I+HY CMVD L R+GLL+EAE +I SMP PD IWG+LL+ACR + ++E + + I
Sbjct: 384 EIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDMERGYRIGRII 443
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE----PGCSLIEVDGEVHE 472
+D N +VL+SN+Y+ S ++ EA R+L ++ +I ++ PGCS IE+ G H+
Sbjct: 444 KGMDPNHIGCHVLLSNIYSTSGRWNEA---RILREKNEISRDRKKIPGCSSIELKGTFHQ 500
Query: 473 FVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
F+ G + HP++ E+Y L+++ ++ G
Sbjct: 501 FLVGDQSHPQSREIYSFLDEMTTKLKSAG 529
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 312/493 (63%), Gaps = 4/493 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTII 59
M++ K++HAHLI +GL + +++ TS + +++A L+F I P+ +++NT+
Sbjct: 1 MQEAKRLHAHLITSGLHQQENHLRKLITLYTSSSSSSLHHARLLFDAIHHPSTYLYNTMF 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R ++ S TP +A+LL ML P P T+P L KA + L G +LH + +K GL
Sbjct: 61 RVYAASPTPLHALLLHRHMLRHGP-PPDTYTFPFLLKACSALAHLPKGQELHCQALKFGL 119
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
F+ N++I++Y + + AR +FD + D+ +W +++ A + +R++FD
Sbjct: 120 GGHVFVENSLIHLYGSNSGMDSARRVFDGMGYR-DIASWTTLLACYANSCSVKAARKVFD 178
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M R+ +S+++MI+ YVR +F+EAL+LFRE+ I+PS+ ++S+L ACA LGA+
Sbjct: 179 EMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCACANLGALDV 238
Query: 240 GEWIHNFLVTNCFE-LNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G W+++++ + + +++ + TA+IDM+ KCG E AL VF +K + W +M+ GLA
Sbjct: 239 GRWVYSYVCQSKGDYVDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVGEWTAMLSGLA 298
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
M+G + I+ F + S +KP+ ++F+A+L+ C+HSG VN+ YF M + ++P++
Sbjct: 299 MHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRMESDFGVEPTV 358
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+H+ C+VD LGRAGL+++A +LI MP +P+A IWGSLL+ACR + N+E+ + AA+ +I+
Sbjct: 359 EHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIGELAAQWLIK 418
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
+ Y+ + +LY + +++E + +L MKEV K PGCSLIEV G +EFV G +
Sbjct: 419 DEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSLIEVGGICYEFVVGDK 478
Query: 479 LHPKAPEVYLLLN 491
HP A E+ L L+
Sbjct: 479 SHPCAVEICLNLS 491
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 187/502 (37%), Positives = 294/502 (58%), Gaps = 13/502 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IH+ + K+ D S ++ S G++N A VF ++ N+ WN++I + Q+
Sbjct: 173 QIHSLIAKSPCLSDVYIGSALVDM-YSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQN 231
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QGLEFDQF 124
A+ +F ML S ++P +T S+ A A L + G ++H RVVK L D
Sbjct: 232 GPAVEALKVFQVML-ESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDII 290
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N + MYA C + EAR +FD + +V+A SM+ G A +R +F KM R
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMVSGYAMAASTKAARLMFTKMAER 349
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSWN++I+GY +N + +EAL LF ++ +++ P+ +T ++L ACA L + G H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAH 409
Query: 245 NFLVTNCFELNT------IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
++ + F+ + V ++IDMY KCGC E VF + ++ WN+M+ G A
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
NGY NEA++LF + S KPD+I+ I VL+AC H+G V + + YF+ MT + + P
Sbjct: 470 QNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
HY+CMVD LGRAG LEEA+ +I MP PD++IWGSLL+AC+ H NI + K A+++ E
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFE 589
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
++ + S YVL+SN+YA ++ +AM R LM++ + K+PGCS I++ G H F+ +
Sbjct: 590 VETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDK 649
Query: 479 LHPKAPEVYLLLNDLGLLIQEM 500
HP+ +++ LL+ +LI EM
Sbjct: 650 SHPRKKQIHSLLD---ILIAEM 668
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 166/312 (53%), Gaps = 5/312 (1%)
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
+H V+K G + FI N +I YA CG L + R +FD++ + +V WNS++ GL K G
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM-PQRNVFTWNSVVTGLTKLG 100
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
+DE+ LF M R+ +WNSM+SG+ ++ + +EAL F M ++ +E+T S L+
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLS 160
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
AC+ L + +G IH+ + + + + +A++DMY KCG A QVF+ + + +
Sbjct: 161 ACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVS 220
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WNS++ NG EA+K+F + S ++PD ++ +V++AC + ++ +
Sbjct: 221 WNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVV 280
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD----PDAIIWGSLLSACRKHGN 405
+ K++ I + VD + ++EA + SMP +++ G ++A K
Sbjct: 281 KMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAAR 340
Query: 406 IEMAKQAAKQII 417
+ K A + ++
Sbjct: 341 LMFTKMAERNVV 352
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 215/506 (42%), Gaps = 113/506 (22%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
D++ +HA +IK+G + + +R++ + G + +F ++ + N+F WN+++ G
Sbjct: 38 DVRCVHASVIKSGFSNEVFIQNRLID-AYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGL 96
Query: 63 SQSSTPRNAILLFIDM----------LVTSPIQPQR--------------------LTYP 92
++ A LF M +V+ Q R T+
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFA 156
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE 152
S A + L G Q+H + K D +I + ++ MY+ CG +++A+ +FDE+
Sbjct: 157 SGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDR 216
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
+VV+WN S+I+ Y +N EAL++F+ M
Sbjct: 217 -NVVSWN-------------------------------SLITCYEQNGPAVEALKVFQVM 244
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT-AIIDMYCKCGC 271
E ++P E T+ S+++ACA L AI+ G+ +H +V N I+++ A +DMY KC
Sbjct: 245 LESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSR 304
Query: 272 PERALQVFNTVP-------------------------------KKGLSCWNSMVFGLAMN 300
+ A +F+++P ++ + WN+++ G N
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA+ LF L+ ++ P + +F +L AC + A + + + +K K
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYTFANILKAC-----ADLADLHLGMQAHVHVLKHGFKF 419
Query: 361 YS----------CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
S ++D + G +EE + R M + D + W +++ ++G A
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAA 436
+ +++ LD E ++ M + +A
Sbjct: 479 ELFREM--LDSGEKPDHITMIGVLSA 502
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 176/466 (37%), Positives = 294/466 (63%), Gaps = 15/466 (3%)
Query: 46 QIKKPNL--FIWNTIIRGFSQSSTPRNA----ILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
+ PN+ F+WN +IR ++S A + L++ M + + + P T+P L ++
Sbjct: 16 HLSHPNIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHA-VLPDLHTFPFLLQS-- 72
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
+ G QLH +++ GL D F+ ++I MY++CG + AR FDE+ T+ D+ +WN
Sbjct: 73 -INTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEI-TQPDLPSWN 130
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE---QN 216
++I AK G I +R+LFD+M +N +SW+ MI GYV ++K AL LFR +Q
Sbjct: 131 AIIHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQ 190
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
++P+EFTM S+L+ACA+LGA++ G+W+H ++ +++ ++ T++IDMY KCG ERA
Sbjct: 191 LRPNEFTMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAK 250
Query: 277 QVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+F+ + P+K + W++M+ +M+G E ++LF+ + + ++P+ ++F+AVL AC H
Sbjct: 251 CIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHG 310
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
G V++ +YF M Y + P I+HY CMVD RAG +E+A +++SMP +PD +IWG+
Sbjct: 311 GLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGA 370
Query: 396 LLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
LL+ R HG++E + A +++ELD S YVL+SN+YA ++ E R LM+ I
Sbjct: 371 LLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGI 430
Query: 456 EKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+K PGCSL+EVDG + EF AG HP+ +Y++L+++ +++ G
Sbjct: 431 KKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHG 476
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 143/333 (42%), Gaps = 74/333 (22%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTI------ 58
+++HA ++ GLA DP + ++ +S G +A F +I +P+L WN I
Sbjct: 80 RQLHAQILLLGLANDPFVQTSLINMYSS-CGTPTFARQAFDEITQPDLPSWNAIIHANAK 138
Query: 59 -------------------------IRGFSQSSTPRNAILLF--IDMLVTSPIQPQRLTY 91
I G+ + A+ LF + L S ++P T
Sbjct: 139 AGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTM 198
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
S+ A A+LG + G +H + K G++ D + ++I MYA CG + A+ +FD +
Sbjct: 199 SSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGP 258
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
E DV+AW++MI + G +E LELF
Sbjct: 259 EKDVMAWSAMITAFSMHGLSEE-------------------------------CLELFAR 287
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIV--VTAIIDMYCK 268
M ++P+ T V++L AC G + +G E+ + N + ++ ++ ++D+Y +
Sbjct: 288 MVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMM--NEYGVSPMIQHYGCMVDLYSR 345
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
G E A V ++P + + M++G +NG
Sbjct: 346 AGRIEDAWNVVKSMPMEP----DVMIWGALLNG 374
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 180/483 (37%), Positives = 290/483 (60%), Gaps = 4/483 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKD-PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K+LK+IH L+ GL + + + + ++ Y+ + Q KP LF N++I
Sbjct: 22 LKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLLYSNQILDQCAKPTLFALNSMI 81
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPI-QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
R +S+S TP + + +L ++ + P T+ L + AQ G +HG ++K G
Sbjct: 82 RAYSKSLTPHKSFQFYNKILQSNDVMSPDNYTFNFLVRTCAQ-SACEAGPAVHGALIKHG 140
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
E+D + + +I+MYA LS +F+ V D+V +M+ AKCG+I +R LF
Sbjct: 141 FEYDPHVESGLIFMYAEMSCLSSCHRVFESVQKP-DLVCQTTMVSACAKCGDIGFARNLF 199
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D M R+ VSWN+MI+GY + + +EAL LF+ MQ +K +E +M+S++ AC LGA+
Sbjct: 200 DSMPQRDFVSWNAMIAGYAQRGQSREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALD 259
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
QG+W H ++ N ++ + TA++DMY KCG +RAL+VF + +K + W++ + GLA
Sbjct: 260 QGKWAHAYIEKNKIQMTVNLGTALVDMYFKCGNVDRALKVFWEMNEKNVYTWSTAIGGLA 319
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
MNGY + ++LFS ++ + P+ I+FI+VL C+ G V++ + +F M + I+P +
Sbjct: 320 MNGYGQKCLELFSFMKHEGIAPNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRL 379
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD GRAG LEEA I +MP P A WG+LL+ACR + N+E+ + A++++IE
Sbjct: 380 EHYGCMVDLYGRAGRLEEALNFINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIE 439
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
++ YV +SN+YA + ++ R MK I K PGCS++EV+GEVHEF +G +
Sbjct: 440 VEGKNHGAYVSLSNIYADTGNWDRVSNVRQSMKAEGISKLPGCSVMEVNGEVHEFFSGDK 499
Query: 479 LHP 481
HP
Sbjct: 500 SHP 502
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 177/471 (37%), Positives = 300/471 (63%), Gaps = 6/471 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++ +KIHA ++KTGL DP + ++ + G + VF ++ + + WN +I
Sbjct: 124 VREGEKIHAFVVKTGLEFDPYVCNSLMDM-YAELGLVEGFTQVFEEMPERDAVSWNIMIS 182
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ + A+ ++ M + S +P T S A A L G ++H + + L+
Sbjct: 183 GYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIANE-LD 241
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N ++ MY CG +S AR +FD + + +V W SM+ G CG++D++R LF++
Sbjct: 242 LTPIMGNALLDMYCKCGCVSVAREIFDAMIVK-NVNCWTSMVTGYVICGQLDQARYLFER 300
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
SR+ V W +MI+GYV+ F++A+ LF EMQ + ++P +F +V+LL CA+LGA+ QG
Sbjct: 301 SPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQG 360
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+WIHN++ N +++ +V TA+I+MY KCGC E++L++FN + + W S++ GLAMN
Sbjct: 361 KWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMN 420
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G +EA++LF +Q+ LKPD I+F+AVL+AC H+G V + + F M+ Y I+P+++H
Sbjct: 421 GKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEH 480
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAII---WGSLLSACRKHGNIEMAKQAAKQII 417
Y C +D LGRAGLL+EAE+L++ +P + II +G+LLSACR +GNI+M ++ A +
Sbjct: 481 YGCFIDLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALA 540
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
++ ++S + L++++YA++ ++E+ + R MK++ I+K PG S IEVDG
Sbjct: 541 KVKSSDSSLHTLLASIYASADRWEDVRKVRSKMKDLGIKKVPGYSAIEVDG 591
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 216/442 (48%), Gaps = 69/442 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+I AH+ GL +D ++++AF S GD NYA +F I P+LFI+N +I
Sbjct: 21 MSQLKQIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIHHPSLFIYNLMI 80
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ F + + R+AI LF L + P TYP + K +G R+G ++H VVK GL
Sbjct: 81 KAFVKRGSLRSAISLF-QQLRERGVWPDNYTYPYVLKGIGCIGEVREGEKIHAFVVKTGL 139
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
EFD ++ N+++ MYA G + +F+E+ E D V+WN MI G
Sbjct: 140 EFDPYVCNSLMDMYAELGLVEGFTQVFEEM-PERDAVSWNIMISG--------------- 183
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIR 238
YVR +F+EA++++R MQ E N KP+E T+VS L+ACA L +
Sbjct: 184 ----------------YVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLE 227
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+ IH++ + N +L I+ A++DMYCKCGC A ++F+ + K ++CW SMV G
Sbjct: 228 LGKEIHDY-IANELDLTPIMGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYV 286
Query: 299 --------------------------MNGYEN-----EAIKLFSGLQSSNLKPDYISFIA 327
+NGY +AI LF +Q ++PD +
Sbjct: 287 ICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVT 346
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
+LT C G + Q K + E +IK + +++ + G +E++ ++ + D
Sbjct: 347 LLTGCAQLGALEQGKWIHNYIDEN-RIKMDAVVSTALIEMYAKCGCIEKSLEIFNGL-KD 404
Query: 388 PDAIIWGSLLSACRKHGNIEMA 409
D W S++ +G A
Sbjct: 405 MDTTSWTSIICGLAMNGKTSEA 426
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 133/280 (47%), Gaps = 13/280 (4%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G+ + + R+F+ + + +N MI +V+ + A+ LF++++E+ + P +T +L
Sbjct: 56 GDFNYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVL 115
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+G +R+GE IH F+V E + V +++DMY + G E QVF +P++
Sbjct: 116 KGIGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAV 175
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
WN M+ G EA+ ++ +Q SN KP+ + ++ L+AC + K+
Sbjct: 176 SWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDY 235
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ + P + + ++D + G + A ++ +M + W S+++ G ++
Sbjct: 236 IANELDLTPIMGN--ALLDMYCKCGCVSVAREIFDAMIV-KNVNCWTSMVTGYVICGQLD 292
Query: 408 MAKQAAKQIIELDKNESCGYVL---MSNLYAASYQFEEAM 444
A+ +++ S VL M N Y FE+A+
Sbjct: 293 QARYL------FERSPSRDVVLWTAMINGYVQFNHFEDAI 326
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 357 bits (917), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 289/485 (59%), Gaps = 9/485 (1%)
Query: 6 KIHAHLIKTGLAKDPIAAS---RILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+IH K G DP + R+ A C G I A L+F ++ ++ W+ +I G+
Sbjct: 143 EIHGLAAKLGFDSDPFVQTGLVRMYAAC----GRIAEARLMFDKMFHRDVVTWSIMIDGY 198
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
QS +A+LLF +M ++P + ++ A + G G +H +++ + D
Sbjct: 199 CQSGLFNDALLLFEEM-KNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVD 257
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ + ++ MYA+CG + A +F+++ T ++VA +M+ G +K G+I+ +R +F++MV
Sbjct: 258 PHLQSALVTMYASCGSMDLALNLFEKM-TPKNLVASTAMVTGYSKLGQIENARSVFNQMV 316
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
++ V W++MISGY + +EAL LF EMQ IKP + TM+S++ ACA LGA+ Q +W
Sbjct: 317 KKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKW 376
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH F+ N F + A+I+MY KCG ERA ++F+ +P+K + W M+ AM+G
Sbjct: 377 IHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGD 436
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
A++ F ++ N++P+ I+F+ VL AC+H+G V + + F M + I P HY
Sbjct: 437 AGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYG 496
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD GRA LL EA +L+ +MP P+ IIWGSL++ACR HG IE+ + AAK+++ELD +
Sbjct: 497 CMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPD 556
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+V +SN+YA + ++E+ + R LMK I KE GCS E++ E+HEF+ R H
Sbjct: 557 HDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKH 616
Query: 483 APEVY 487
A E+Y
Sbjct: 617 ADEIY 621
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 228/469 (48%), Gaps = 67/469 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++HA ++++ L + +++ + + ++YA VF I KP + N +R
Sbjct: 36 LTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLR 95
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S+S P +L++ + + T + R ++P L KA +++ +G ++HG K G +
Sbjct: 96 ELSRSEEPEKTLLVY-ERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFD 154
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ ++ MYA CG ++EARLMFD++ DVV W+ MI G
Sbjct: 155 SDPFVQTGLVRMYAACGRIAEARLMFDKM-FHRDVVTWSIMIDG---------------- 197
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
Y ++ F +AL LF EM+ N++P E + ++L+AC + G + G
Sbjct: 198 ---------------YCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYG 242
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQ----------------------- 277
+ IH+F++ N ++ + +A++ MY CG + AL
Sbjct: 243 KMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKL 302
Query: 278 --------VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
VFN + KK L CW++M+ G A + EA+ LF+ +QS +KPD ++ ++V+
Sbjct: 303 GQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVI 362
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
TAC H G ++QAK + L + ++ + +++ + G LE A ++ MP +
Sbjct: 363 TACAHLGALDQAK-WIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPR-KN 420
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASY 438
I W ++SA HG+ A + Q +E + E G + LYA S+
Sbjct: 421 VISWTCMISAFAMHGDAGSALRFFHQ-MEDENIEPNGITFVGVLYACSH 468
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 136/287 (47%), Gaps = 11/287 (3%)
Query: 161 MIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS 220
+I A +D + +F+ + T N + R+ + ++ L ++ M+ Q +
Sbjct: 62 VISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVD 121
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
F+ LL A +++ ++ +G IH F+ + V T ++ MY CG A +F+
Sbjct: 122 RFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFD 181
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
+ + + W+ M+ G +G N+A+ LF +++ N++PD + VL+AC +G ++
Sbjct: 182 KMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSY 241
Query: 341 AK---DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLL 397
K D+ +M + P ++ S +V G ++ A L M + + + +++
Sbjct: 242 GKMIHDF--IMENNIVVDPHLQ--SALVTMYASCGSMDLALNLFEKM-TPKNLVASTAMV 296
Query: 398 SACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
+ K G IE A+ Q+++ K+ C ++S YA S +EA+
Sbjct: 297 TGYSKLGQIENARSVFNQMVK--KDLVCWSAMISG-YAESDSPQEAL 340
>gi|224118458|ref|XP_002331487.1| predicted protein [Populus trichocarpa]
gi|222873565|gb|EEF10696.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 197/535 (36%), Positives = 303/535 (56%), Gaps = 45/535 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+I AH+ KT L SR+LAFC S +GDIN+A+L+F+Q++ PN +IWNT+I
Sbjct: 63 MLQLKQIQAHMTKTALISHTFPVSRVLAFCALSDSGDINHAHLLFSQLQNPNTYIWNTMI 122
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S++ + L F M V ++ ++ KA Q +G +H V K G
Sbjct: 123 RGYSKAKMGQTGFLFFCQM-VQKGVEMDCRSFVFALKACEQFLGVLEGKSVHCVVWKMGF 181
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ + N +++ Y G L ARL+FDE+ +E DVV+W SMI G +K DE+ +LFD
Sbjct: 182 VYTLLVQNGLVHFYGLRGCLGLARLVFDEI-SERDVVSWTSMIDGYSKHKWCDEALKLFD 240
Query: 180 KM----------------------------------------VSRNTVSWNSMISGYVRN 199
M V+R+ N+++ YV+
Sbjct: 241 SMLMYGVVEPNEVTMIAVLSSCSQKGDLILGKTFLEYVKTRNVTRSLNLMNAILDMYVKC 300
Query: 200 VKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH-NFLVTNCFELNTIV 258
A E+F M P E T+ +L C +LG + G+WIH N++ E++ I+
Sbjct: 301 GCLDSAREIFDTMGAA-FAPMENTLACVLPVCGQLGCLDVGQWIHRNYVRMRYNEISVIL 359
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
A+IDMY KCG A +VFN +P++ L WNSM+ A +G+ +A+ +F + S
Sbjct: 360 ANALIDMYAKCGVIHEAAKVFNDMPERNLVSWNSMITAYASHGHAKQALSVFERMISGGF 419
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
KPD I+ + VL+AC+H G V + ++YF M Y I+P +HY+CM+D LGR GLLE+A
Sbjct: 420 KPDDITLVGVLSACSHGGLVAEGQEYFQNMKRKYGIEPKNEHYACMIDLLGRVGLLEDAY 479
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASY 438
+LI MP +P A WG+L+ ACR HGN+E+AK AA +++ELD +S YVL++N+ A+
Sbjct: 480 ELITKMPMEPSAAAWGALVHACRMHGNVEVAKIAAPRLLELDPEDSGIYVLLANICASGR 539
Query: 439 QFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
++ + R +M+E +++K PG S++EV+G+ HEF+AG HP++ +Y L+ L
Sbjct: 540 RWGDVKMARRMMRERRVKKIPGRSIVEVEGQFHEFLAGDESHPQSEGIYNALDQL 594
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 295/501 (58%), Gaps = 11/501 (2%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+DL + H ++ L++ A++I+ C G +A VF + PNL + N +I+
Sbjct: 24 RDLLRAHGLAVRLCLSQSSYVATQIVHVCNGH-GRAAHAARVFAHVPAPNLHLHNAMIKA 82
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQP--------QRLTYPSLFKAYAQLGLARDGAQLHGR 113
++Q+ R+A+ +++ ML P R TYP L KA L ++ G Q+H
Sbjct: 83 YAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAASQLGRQVHAH 142
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
V + G E + N++I MY CG LS AR +FD + E D V+WN++I A+ G++ +
Sbjct: 143 VARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGM-REKDAVSWNTLISAHARMGQMRK 201
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R LF M + VSW +++SGY F A+E+FR+MQ + +P + ++V++L ACA+
Sbjct: 202 ARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPDDVSIVAVLPACAQ 261
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LGA+ G WI+ + + + A+++MY KCGC E ALQ+F+ + +K + W++
Sbjct: 262 LGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTA 321
Query: 294 VFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
+ GLA +G EA+KLF + + + P+ I+F+ +L+AC+H+G +++ YF M E Y
Sbjct: 322 IGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGLLDEGLRYFDRMKEEY 381
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
++PS++HY C+VD LGR+G ++ A I MP PD IWGSLLSACR H +++ A A
Sbjct: 382 GVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSLLSACRSHSDVDTAVVA 441
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A++++EL+ + V+++N+YAA+ ++ R ++ K PGCS+IEVD V E
Sbjct: 442 AERLVELEPEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRSTRKTPGCSMIEVDNVVRE 501
Query: 473 FVAGGRLHPKAPEVYLLLNDL 493
FVAG L P+ + +++ L
Sbjct: 502 FVAGEDLGPELGGIAAIIDIL 522
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 190/506 (37%), Positives = 297/506 (58%), Gaps = 46/506 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDP-IAASRILAFC---TSPAGDINYAYLVFTQIKKPNLFIWN 56
+ LK+ HA +++TG +D IA S + ++ T+ + VF ++KPN+F+WN
Sbjct: 68 LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 127
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+I+ +++ P AILL+ +M+V +P + TYP++ KA + G+ +G Q+H +VK
Sbjct: 128 CMIKVCIENNEPFKAILLYYEMMVAH-FRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVK 186
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
GL D I ++ I MYA+ G L EAR + D+ E D V
Sbjct: 187 HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVC------------------- 227
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
M R F EALE+F +MQ++ I+P +F + S+L+ACA LGA
Sbjct: 228 ----MPDRKGC--------------FMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGA 269
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ QG WIH + N +L+ ++ T+++DMY KCG + A +VF + K +S WN+M+ G
Sbjct: 270 LDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG 329
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LAM+G +AI LFS + ++ P+ I+F+ VL AC H G V + F M + Y ++P
Sbjct: 330 LAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEP 386
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
I+HY C+VD LGRAGLL EAEK++ S+P++P +WG+LL ACRKHGN+E+ ++ K +
Sbjct: 387 QIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKIL 446
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD-GEVHEFVA 475
+EL+ S Y L+SN+YA + ++EE E R LMKE I+ PG S+I++ GEVH+F+
Sbjct: 447 LELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFII 506
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQEMG 501
G HP+ ++Y +L+ + +Q G
Sbjct: 507 GDGSHPQVKDIYQMLDKVKERLQMEG 532
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 302/490 (61%), Gaps = 4/490 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H +K+ + D A+ ++ C GD++ A VFT IK+ ++ WN++I GF Q
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLI-HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+P A+ LF M + ++ +T + A A++ G Q+ + + + +
Sbjct: 210 KGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MY CG + +A+ +FD ++ E D V W +M+ G A + + +R + + M +
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+ V+WN++IS Y +N K EAL +F E+Q ++N+K ++ T+VS L+ACA++GA+ G WI
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H+++ + +N V +A+I MY KCG E++ +VFN+V K+ + W++M+ GLAM+G
Sbjct: 388 HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 447
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
NEA+ +F +Q +N+KP+ ++F V AC+H+G V++A+ F M Y I P KHY+C
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+VD LGR+G LE+A K I +MP P +WG+LL AC+ H N+ +A+ A +++EL+
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRN 567
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
+VL+SN+YA ++E E R M+ ++KEPGCS IE+DG +HEF++G HP +
Sbjct: 568 DGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMS 627
Query: 484 PEVYLLLNDL 493
+VY L+++
Sbjct: 628 EKVYGKLHEV 637
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 209/437 (47%), Gaps = 67/437 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ LK+ H H+I+TG DP +AS++ A S + YA VF +I KPN F WNT+I
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLI 102
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R ++ P +I F+DM+ S P + T+P L KA A++ G LHG VK +
Sbjct: 103 RAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV 162
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F+ N++I+ Y +CG L A +F + E DVV+WNSMI G + G D++ LF
Sbjct: 163 GSDVFVANSLIHCYFSCGDLDSACKVFTTI-KEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
K M+ +++K S TMV +L+ACAK+ +
Sbjct: 222 K-------------------------------MESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF-------------------- 279
G + +++ N +N + A++DMY KCG E A ++F
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310
Query: 280 -----------NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYISFIA 327
N++P+K + WN+++ NG NEA+ +F LQ N+K + I+ ++
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
L+AC G + + + + + I+ + S ++ + G LE++ ++ S+
Sbjct: 371 TLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 429
Query: 388 PDAIIWGSLLSACRKHG 404
D +W +++ HG
Sbjct: 430 -DVFVWSAMIGGLAMHG 445
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/489 (37%), Positives = 296/489 (60%), Gaps = 4/489 (0%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFC--TSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
LK+I +HL T KDP AA++I++ ++ + YA +F ++ + FIWNT+++
Sbjct: 27 LKQIQSHLTVTATLKDPYAAAKIISLHAHSNARSSLFYAERLFLCLQNKSTFIWNTMMQA 86
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
F + + A L+ ML ++ + P T+ + +A + + G HG+VVK G E
Sbjct: 87 FVEKNEAVRAFSLYKHMLESNYL-PNNFTFSFVIRACIDVFNLQMGLCFHGQVVKFGWES 145
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
F+ N +I++YANCGF+ AR MFD + + DVV W +I G G++ +R LFD+M
Sbjct: 146 YDFVQNGLIHLYANCGFMDLARNMFD-MSIKRDVVTWTCLISGYLNSGQVLIARELFDRM 204
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+N VSW ++I+GYVR FKEALE+F +MQ + + ++V L ACA LGA+ QG
Sbjct: 205 PEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQGR 264
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
WIH ++ + L+ ++ TA+IDMY KCGC E A VF+ + + + + ++ GLA +
Sbjct: 265 WIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVYAFTCLISGLANHD 324
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
AI LF+ +Q + P+ ++F+ VL AC+ G V++ F M+ Y I+P I+HY
Sbjct: 325 KSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQIQHY 384
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
C+VD LGRAG +EEA++++R MP PD+ G+LL ACR HG++++ ++ +++
Sbjct: 385 GCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGEEMVDSLVQRCL 444
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ +VL+SN+YA++ ++E+A + R M++ I K PGCS IEV+G V EFV G R +
Sbjct: 445 DHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCSSIEVNGTVCEFVTGDRSYA 504
Query: 482 KAPEVYLLL 490
++ LL
Sbjct: 505 LEEDIMFLL 513
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/564 (35%), Positives = 305/564 (54%), Gaps = 73/564 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ LK+IHA I + L+ ++I+ S A ++YA VF Q ++P+ FI+N +IR
Sbjct: 19 IQQLKQIHAKSIISSLSYTQFIITKIINSFLSHAC-LDYATQVFNQTQEPDGFIYNAMIR 77
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+S S TP AI ++ M I + TYP +FKA A G ++HG +V+ G E
Sbjct: 78 AYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYE 137
Query: 121 -------------------------FDQF------IHNTIIYMYANCGFLSEARLMFDEV 149
FD+F N +I YA G + ++ +F E+
Sbjct: 138 LDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEM 197
Query: 150 DTEFDVVAWNSMIIGL----------------------------------------AKCG 169
+V ++GL KCG
Sbjct: 198 VEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCG 257
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
+D +R+LFD++ +NTV WNS+I GY + E +EL REM N+KP FT+ +L+
Sbjct: 258 YLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLS 317
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
ACA++GA G W+H F + + TA+IDMY KCG A +VF+ + ++ ++
Sbjct: 318 ACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVAT 376
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WN+++ G A +G AI+LFS ++ S +PD I+F+AVL AC HSG V K YF LM
Sbjct: 377 WNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLML 436
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ YKI P ++HY CMVD LGRAGLL+EA +LI+ M +P+ ++WG+LLSAC HGNIE+
Sbjct: 437 QYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIG 496
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGE 469
+ AA +I+L+ + YV+++NLYA++ +F R +M E I K GCS+IE+
Sbjct: 497 EWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGDV 556
Query: 470 VHEFVAGGRLHPKAPEVYLLLNDL 493
VHEFV ++HP++ E+Y +L++L
Sbjct: 557 VHEFVVADKMHPRSEEIYSVLDEL 580
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 185/492 (37%), Positives = 296/492 (60%), Gaps = 7/492 (1%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA +I+T +D ++ C S ++YAY VF+ + PN++++ +I GF S
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVC-STLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSG 106
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
+ + L+ M+ S + P S+ KA L + R ++H +V+K G + +
Sbjct: 107 RSADGVSLYHRMIHNS-VLPDNYVITSVLKA-CDLKVCR---EIHAQVLKLGFGSSRSVG 161
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
++ +Y G L A+ MFDE+ + D VA MI ++CG I E+ LF + ++T
Sbjct: 162 LKMMEIYGKSGELVNAKKMFDEM-PDRDHVAATVMINCYSECGFIKEALELFQDVKIKDT 220
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
V W +MI G VRN + +ALELFREMQ +N+ +EFT V +L+AC+ LGA+ G W+H+F
Sbjct: 221 VCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSF 280
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ EL+ V A+I+MY +CG A +VF + K + +N+M+ GLAM+G EA
Sbjct: 281 VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
I F + + +P+ ++ +A+L AC+H G ++ + F M + ++P I+HY C+VD
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVD 400
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR G LEEA + I ++P +PD I+ G+LLSAC+ HGN+E+ ++ AK++ E + +S
Sbjct: 401 LLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGT 460
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
YVL+SNLYA+S +++E+ E R M++ IEKEPGCS IEVD ++HEF+ G HP +
Sbjct: 461 YVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAI 520
Query: 487 YLLLNDLGLLIQ 498
Y L +L +++
Sbjct: 521 YQRLQELNRILR 532
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/503 (37%), Positives = 299/503 (59%), Gaps = 11/503 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++HA + K+ + D S ++ S G + A VF+ + + NL WN++I + Q+
Sbjct: 168 QVHALVSKSRYSTDVYMGSALIDM-YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQN 226
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQF 124
A+ +F+ M+ S ++P +T S+ A A L ++G Q+H RVVK D
Sbjct: 227 GPASEALEVFVRMM-DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MYA C ++EAR +FD + +VV+ SM+ G A+ + +R +F KM R
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDRMSIR-NVVSETSMVSGYARAASVKAARFMFSKMTQR 344
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSWN++I+GY +N + +EAL LFR ++ ++I P+ +T +LL+ACA L + G H
Sbjct: 345 NVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAH 404
Query: 245 NFLVTNCFELNT------IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
++ FE + V ++IDMY KCG E +VF + ++ WN+++ G A
Sbjct: 405 THVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYA 464
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
NGY EA+++F + KPD+++ I VL AC+H+G V + + YF M E + + P
Sbjct: 465 QNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLK 523
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
HY+CMVD LGRAG L EA+ LI +MP +PDA++WGSLL+AC+ HGNIEM K AA++++E
Sbjct: 524 DHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLE 583
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
+D S YVL+SN+YA ++ + + R LM++ + K+PGCS IEV+ VH F+ +
Sbjct: 584 IDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDK 643
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
HP ++Y +L L ++ +G
Sbjct: 644 SHPHRKQIYSVLKMLTEQMKRVG 666
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 172/332 (51%), Gaps = 2/332 (0%)
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
LV P + L + + AR +H R++ + FI N +I +Y C
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
L +AR +FD + + + WNS+I L K G +DE+ RLF M + SWNSM+SG+ +
Sbjct: 66 LDDARKLFDRM-PQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQ 124
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
+ +F+E+LE F +M ++ +E++ S L+ACA L + G +H + + + + +
Sbjct: 125 HDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYM 184
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
+A+IDMY KCG A +VF+ + ++ L WNS++ NG +EA+++F + S L
Sbjct: 185 GSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGL 244
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
+PD ++ +V++AC + + + +T K + + + +VD + + EA
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
++ M S + + S++S + +++ A+
Sbjct: 305 RVFDRM-SIRNVVSETSMVSGYARAASVKAAR 335
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 209/461 (45%), Gaps = 57/461 (12%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+ + +HA ++ T + + +R++ ++ A +F ++ + N F WN++I
Sbjct: 32 RGTRLVHARILMTQFSMEIFIQNRLIDV-YGKCDCLDDARKLFDRMPQRNTFTWNSLISV 90
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++S A LF M P +P + ++ S+ +AQ + + ++ ++
Sbjct: 91 LTKSGFLDEAARLFGSM----P-EPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLL 145
Query: 122 DQFIHNTIIYMYA---NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+++ + + A + ++ + + DV +++I +KCG + + +F
Sbjct: 146 NEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVF 205
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
M+ RN V+WNS+I+ Y +N EALE+F M + ++P E T+ S+++ACA L A++
Sbjct: 206 SGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALK 265
Query: 239 QGEWIHNFLV-TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-------------- 283
+G IH +V TN F + ++ A++DMY KC A +VF+ +
Sbjct: 266 EGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGY 325
Query: 284 -----------------KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
++ + WN+++ G NG EA++LF L+ ++ P + +F
Sbjct: 326 ARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFG 385
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS----------CMVDALGRAGLLEE 376
+L+AC N A T+ +K + S ++D + G +E+
Sbjct: 386 NLLSAC-----ANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIED 440
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
++ M + D + W +++ ++G A Q ++++
Sbjct: 441 GSRVFEKM-KERDCVSWNAIIVGYAQNGYGAEALQIFRKML 480
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 164/423 (38%), Gaps = 111/423 (26%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL----AFCT------------------------- 31
+K+ +IHA ++KT +D + L A C+
Sbjct: 264 LKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVS 323
Query: 32 --SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRL 89
+ A + A +F+++ + N+ WN +I G++Q+ A+ LF +L I P
Sbjct: 324 GYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLF-RLLKRESIWPTHY 382
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF------DQFIHNTIIYMYANCGFLSEAR 143
T+ +L A A L G Q H V+KQG EF D F+ N++I MY CG + +
Sbjct: 383 TFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGS 442
Query: 144 LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+F+++ E D V+WN++I+G Y +N
Sbjct: 443 RVFEKM-KERDCVSWNAIIVG-------------------------------YAQNGYGA 470
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTA 261
EAL++FR+M KP TM+ +L AC+ G + +G H F L + T
Sbjct: 471 EALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGR--HYFFSMEEHGLIPLKDHYTC 528
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
++D+ + GC A + +P + PD
Sbjct: 529 MVDLLGRAGCLNEAKNLIEAMP----------------------------------VNPD 554
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTET--YKIKPSIKHYSCMVDALGRAGLLEEAEK 379
+ + ++L AC G + K + E + P + S M LGR G + K
Sbjct: 555 AVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVL-LSNMYAELGRWGDVVRVRK 613
Query: 380 LIR 382
L+R
Sbjct: 614 LMR 616
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 304/497 (61%), Gaps = 7/497 (1%)
Query: 9 AHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTP 68
H++K G D + + S G+++ AY VF + + +L WN++I G +
Sbjct: 182 GHVLKFGFECDIFVHNASITMLLS-CGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLA 240
Query: 69 RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNT 128
AI ++ +M ++P +T + + +Q+ G + H + + GLEF + N
Sbjct: 241 IEAIKIYKEM-EAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNA 299
Query: 129 IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS 188
++ MY CG L AR++FD + + +V+W +M++G A+ G +D +R + K+ ++ V
Sbjct: 300 LMDMYVKCGELLTARVLFDNM-AQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVP 358
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
WN++ISG V+ + KEAL LF EMQ + I+P + TMV+ L+AC++LGA+ G WIH+++
Sbjct: 359 WNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIE 418
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
+ ++ + TA++DMY KCG RALQVF +P++ W +++ GLA++G +A+
Sbjct: 419 RHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALS 478
Query: 309 LFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL 368
FS + + PD I+F+ VL+AC H G V + + YF+ M+ + + P +KHYSCMVD L
Sbjct: 479 YFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLL 538
Query: 369 GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYV 428
GRAG LEEAE+L+++MP DA + G+L ACR +GN+++ ++ A +++E+D +S YV
Sbjct: 539 GRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYV 598
Query: 429 LMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY- 487
L++++Y+ + ++EA R LM + +EK PGCSL+E++G VHEFV HP++ +Y
Sbjct: 599 LLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYE 658
Query: 488 ---LLLNDLGLLIQEMG 501
L L +++++ G
Sbjct: 659 CLVTLTKQLDVIVRKHG 675
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 212/448 (47%), Gaps = 66/448 (14%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+I A ++ TGL ++ AASR++AFC S + +++Y + +IK+ N+F WN IRG+
Sbjct: 73 LKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGY 132
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+S +L+ ML+ ++P TYP L K + G + G V+K G E D
Sbjct: 133 VESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECD 192
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+HN I M +CG LS A +F++ D+V WNSMI G K
Sbjct: 193 IFVHNASITMLLSCGELSVAYDVFNKSRVR-DLVTWNSMITGCVK--------------- 236
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R + EA+++++EM+ + ++P+E TM+ ++++C+++ + G+
Sbjct: 237 ---------------RGLAI-EAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKE 280
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
H ++ + E + A++DMY KCG A +F+ + +K L W +MV G A G+
Sbjct: 281 FHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGF 340
Query: 303 EN-------------------------------EAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ EA+ LF +Q ++PD ++ + L+A
Sbjct: 341 LDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSA 400
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C+ G ++ + E +K+ + + +VD + G + A ++ +P + +
Sbjct: 401 CSQLGALDVGI-WIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQR-NCL 458
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIEL 419
W +++ HGN + A ++I +
Sbjct: 459 TWTAVICGLALHGNAQDALSYFSKMIHI 486
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 182/467 (38%), Positives = 282/467 (60%), Gaps = 3/467 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G I+ A +F + NL ++NTI+ +++ R A+ + +ML P +P R+T S
Sbjct: 281 GAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGP-RPDRVTMLSA 339
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A AQL G HG V++ GLE I N II MY CG A +FD + +
Sbjct: 340 ISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNK-T 398
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
VV+WNS+ G + G+++ + +F+++ RN V WN+MISG V+ F++A+ELFREMQ
Sbjct: 399 VVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQG 458
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+ IK TM+ + +AC LGA +W+H ++ N + + TA++DM+ +CG P+
Sbjct: 459 EGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQS 518
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A+QVFN + ++ +S W + + +AM G A LF+ + +KPD + F+ VLTAC+H
Sbjct: 519 AMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSH 578
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
G+V Q F+LM E + I P I+HY CMVD LGRAGLL EA LI+SMP +P+ ++WG
Sbjct: 579 GGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWG 637
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
SLL+ACR H N+EMA AA++I EL + +VL+SN+YA++ ++ + RL ++E
Sbjct: 638 SLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKG 697
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ K PG S ++V+G +HEF +G HP+ + L+L ++ + G
Sbjct: 698 VRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAG 744
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 231/468 (49%), Gaps = 58/468 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKP-----NL 52
+ LK++H + K GL + P ++++ A SP ++YA F K+ L
Sbjct: 38 LNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPE-SLDYARKAFELFKEDVRSDDAL 96
Query: 53 FIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHG 112
F+ N++IRG+S + R AILL++ MLV + P T+P + ++ +G Q+HG
Sbjct: 97 FMLNSLIRGYSSAGLGREAILLYVRMLVLG-VTPNHYTFPFVLSGCTKIAAFCEGIQVHG 155
Query: 113 RVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID 172
VVK GLE D FI N +I+ YA +CG +D
Sbjct: 156 SVVKMGLEEDVFIQNCLIHFYA--------------------------------ECGHMD 183
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
++F+ M RN VSW S+I GY R + KEA+ LF EM E I+PS TMV +++ACA
Sbjct: 184 HGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACA 243
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
KL + GE + ++ +LN ++V A++DMY KCG + A ++F+ + L +N+
Sbjct: 244 KLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNT 303
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
++ A G EA+ + + +PD ++ ++ ++A ++ + Y
Sbjct: 304 ILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISA-----SAQLVDLFYGKVCHGY 358
Query: 353 KIKPSIKHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
I+ ++ + + ++D + G E A ++ M S+ + W SL + ++G++E
Sbjct: 359 VIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLM-SNKTVVSWNSLTAGFIRNGDVES 417
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
A + QI E +N ++S L S FE+A+E L +E++ E
Sbjct: 418 AWEVFNQIPE--RNAVFWNTMISGLVQKSL-FEDAIE---LFREMQGE 459
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 186/503 (36%), Positives = 301/503 (59%), Gaps = 14/503 (2%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +IHA L++ GL PI + L + G ++++ +F + PN+F+W II +
Sbjct: 39 LLQIHAALLRRGLHHHPILNFK-LQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHA 97
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+A+ + ML T PIQP T SL KA L AR +H +K GL
Sbjct: 98 HFDLFHHALSYYSQML-THPIQPNAFTLSSLLKA-CTLHPAR---AVHSHAIKFGLSSHL 152
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
++ ++ YA G ++ A+ +FD + E +V++ +M+ AK G + E+R LF+ M
Sbjct: 153 YVSTGLVDAYARGGDVASAQKLFDAM-PERSLVSYTAMLTCYAKHGMLPEARVLFEGMGM 211
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQ-------NIKPSEFTMVSLLNACAKLGA 236
++ V WN MI GY ++ EAL FR+M ++P+E T+V++L++C ++GA
Sbjct: 212 KDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGA 271
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G+W+H+++ N ++N V TA++DMYCKCG E A +VF+ + K + WNSM+ G
Sbjct: 272 LECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMG 331
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
++G+ +EA++LF + +KP I+F+AVLTAC H+G V++ + F M + Y ++P
Sbjct: 332 YGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEP 391
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++HY CMV+ LGRAG ++EA L+RSM +PD ++WG+LL ACR H N+ + ++ A+ +
Sbjct: 392 KVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEIL 451
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+ S YVL+SN+YAA+ + + R +MK +EKEPGCS IEV VHEFVAG
Sbjct: 452 VSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAG 511
Query: 477 GRLHPKAPEVYLLLNDLGLLIQE 499
R HP++ ++Y +L + ++E
Sbjct: 512 DRRHPRSKDIYSMLEKMNGWLKE 534
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/570 (35%), Positives = 311/570 (54%), Gaps = 71/570 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K LK IHA L++ GL +D +++L F + G+ NY++ + Q K+PN+F++NT+IR
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRF-SFNFGNTNYSFRILDQTKEPNIFLFNTMIR 81
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G + + +I ++ M + P T+P + KA A++ + G ++H VVK G E
Sbjct: 82 GLVLNDCFQESIEIYHSMR-KEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCE 140
Query: 121 FDQ--------------FIHNTI-----------------IYMYANCGFLSEARLMF--- 146
D FI N I Y G EA MF
Sbjct: 141 ADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRL 200
Query: 147 -------------------------------DEVDTE----FDVVAWNSMIIGLAKCGEI 171
DE TE +V +++ KCG +
Sbjct: 201 LEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNM 260
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
+ +R +FD M+ +N VSW+SMI GY N KEAL+LF +M + +KP + MV +L +C
Sbjct: 261 ERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSC 320
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A+LGA+ G+W N + N F N+++ TA+IDMY KCG +RA +VF + KK WN
Sbjct: 321 ARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWN 380
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+ + GLAM+G+ +A+ LF ++ S +KPD +F+ +L AC H+G V + + YF M
Sbjct: 381 AAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECV 440
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ + P I+HY CMVD LGRAG L+EA +LI+SMP + +AI+WG+LL CR H + ++ +
Sbjct: 441 FTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEV 500
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
K++I L+ S YVL+SN+YAAS+++EEA + R +M E ++K PG S IEVDG VH
Sbjct: 501 VLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGVVH 560
Query: 472 EFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+F+ G HP + ++Y L +L ++ G
Sbjct: 561 QFLVGDTSHPLSEKIYAKLGELAKDLKAAG 590
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/418 (41%), Positives = 261/418 (62%), Gaps = 2/418 (0%)
Query: 86 PQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLM 145
P ++P + KA A+L L G ++H +K G+ D F+ N +I +++CG + AR +
Sbjct: 8 PDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAV 67
Query: 146 FDEVDTEF-DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
FD + DVV+WNSMI G + + + ++FD++ RNTV W SMI+GY ++ FKE
Sbjct: 68 FDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDLFKE 127
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
A+ELFREMQ T+ +L+AC GA+ QG WIH + N E++ A+I
Sbjct: 128 AIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIG 187
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYI 323
MY KCG ++AL++F+ + + + W++++ GLAMNG ++A+ LFS ++ S+++P+ I
Sbjct: 188 MYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEI 247
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F+ VL ACNH G V++ YF MT+ Y + P I+HY CMVD LGRA LL EAEK IR+
Sbjct: 248 TFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRT 307
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
+P PD +IW SLL ACR HGNIE+A+ AAKQI EL+ VL+SN+YA++ ++ +
Sbjct: 308 LPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDV 367
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R M +I+K+PGCS +E+DG VHE R HP+ +Y + + +Q G
Sbjct: 368 KRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINKALQSKG 425
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 12/195 (6%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S GDI A +F + +P++F W+ +I G + + A+ LF M + S I+P +T+
Sbjct: 190 SKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITF 249
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVK-----QGLEFDQFIHNTIIYMYANCGFLSEARLMF 146
+ A G G + + G+E + ++ + L EA
Sbjct: 250 LGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEH----YGCMVDLLGRANLLVEAEKFI 305
Query: 147 DEVDTEFDVVAWNSMIIGLAKCGEIDESR---RLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+ + DVV W S++ G I+ + + +++ R + + + Y ++
Sbjct: 306 RTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWG 365
Query: 204 EALELFREMQEQNIK 218
+ + ++M Q IK
Sbjct: 366 DVKRVRKDMATQRIK 380
>gi|356544269|ref|XP_003540576.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 522
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/503 (37%), Positives = 298/503 (59%), Gaps = 21/503 (4%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M+++K+IH H I GLA+ +S++LAF D+ YA+ +F+ I PNLF +NTII
Sbjct: 17 MREMKQIHGHAITHGLARFAFISSKLLAFYAR--SDLRYAHTLFSHIPFPNLFDYNTIIT 74
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
FS P + L FI ML + + P T+ L + QLH ++++G
Sbjct: 75 AFS----PHYSSLFFIQML-NAAVSPNSRTFSLLLSKSSPSLPFLH--QLHSHIIRRGHV 127
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ +++ Y+N G AR +FD+ + +V W S++ G G ++++R LFD
Sbjct: 128 SDFYVITSLLAAYSNHGSTRAARRLFDQSPYK-NVACWTSLVTGYCNNGLVNDARNLFDA 186
Query: 181 MVSR--NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+ R N VS+++M+SGYV+N F+E ++LFRE++++N+KP+ + S+L+ACA +GA
Sbjct: 187 IPERERNDVSYSAMVSGYVKNGCFREGIQLFRELKDRNVKPNNSLLASVLSACASVGAFE 246
Query: 239 QGEWIHNFLVTN---CF-ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
+G+WIH ++ N C+ EL + TA+ID Y KCGC E A +VF + K ++ W++MV
Sbjct: 247 EGKWIHAYVDQNKSQCYYELE--LGTALIDFYTKCGCVEPAQRVFGNMKTKDVAAWSAMV 304
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLA+N EA++LF ++ +P+ ++FI VLTACNH +A F M++ Y I
Sbjct: 305 LGLAINAKNQEALELFEEMEKVGPRPNAVTFIGVLTACNHKDLFGEALKLFGYMSDKYGI 364
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
SI+HY C+VD L R+G +EEA + I+SM +PD +IWGSLL+ C H NIE+ + K
Sbjct: 365 VASIEHYGCVVDVLARSGKIEEALEFIKSMEVEPDGVIWGSLLNGCFLHNNIELGHKVGK 424
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
++EL+ YVL+SN+YA ++E +E R MK+ + G S IE+ VH+F+
Sbjct: 425 YLVELEPGHGGRYVLLSNVYATMGKWEAVLETRKFMKDRGVPAVSGSSFIEIHQTVHKFL 484
Query: 475 AGGRLH---PKAPEVYLLLNDLG 494
H EVY +LN LG
Sbjct: 485 VHDNNHHCGSYPAEVYRVLNHLG 507
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 132/301 (43%), Gaps = 12/301 (3%)
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
Q R+ Q+HG + GL FI + ++ YA L A +F + ++ +N
Sbjct: 13 QCSSMREMKQIHGHAITHGLARFAFISSKLLAFYARSD-LRYAHTLFSHIPFP-NLFDYN 70
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
++I + ++ + VS N+ +++ ++S ++ F +L + +
Sbjct: 71 TIITAFSPHYSSLFFIQMLNAAVSPNSRTFSLLLSKSSPSLPFLH--QLHSHIIRRGHVS 128
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
+ + SLL A + G+ R L N T+++ YC G A +F
Sbjct: 129 DFYVITSLLAAYSNHGSTRAARR----LFDQSPYKNVACWTSLVTGYCNNGLVNDARNLF 184
Query: 280 NTVPKKGLS--CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK 337
+ +P++ + +++MV G NG E I+LF L+ N+KP+ +VL+AC G
Sbjct: 185 DAIPERERNDVSYSAMVSGYVKNGCFREGIQLFRELKDRNVKPNNSLLASVLSACASVGA 244
Query: 338 VNQAKDYFTLMTET-YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
+ K + + + ++ + ++D + G +E A+++ +M + D W ++
Sbjct: 245 FEEGKWIHAYVDQNKSQCYYELELGTALIDFYTKCGCVEPAQRVFGNMKTK-DVAAWSAM 303
Query: 397 L 397
+
Sbjct: 304 V 304
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 294/475 (61%), Gaps = 17/475 (3%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L+++HA +I+ GL +D S+ L C S + + +Y VF + P+ +WNT I+G+S
Sbjct: 89 LEQVHARIIRKGLHQDHFIISQFLTLCNSLS-NFSYTTSVFNGVSSPSTVLWNTYIKGYS 147
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
++ + + LFI M + + P + TYPSL KA +++ ++G HG V+ G+ D
Sbjct: 148 ENYSVSLTVSLFIRMKRSDAV-PDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDV 206
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ ++I +Y CG + AR +FDE+ E +VV+W +MI G A ++ E+R+LFD+M
Sbjct: 207 FVMTSLIDLYGKCGEILCARKVFDEMG-ERNVVSWTAMIAGYASFSDLVEARKLFDEMPE 265
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQN-------------IKPSEFTMVSLLNA 230
+N VSWN++ISGYV+ + A ++F EM +N +KP EF MVSL++A
Sbjct: 266 KNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVVAWSALISGNVKPDEFIMVSLMSA 325
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTI-VVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
C+++G++ +W+ +++ + +++ V+ A+IDM KCG +RA ++F +PK+ L
Sbjct: 326 CSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLIS 385
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
+ SM+ GL+++G +A+ LFS + + L PD ++F +LTAC+ +G V++ YF M
Sbjct: 386 YCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMK 445
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
Y I PS HY+CMVD LGRAG L+EA +L++SMP +P A WG+LL AC+ H +IE+
Sbjct: 446 TDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELG 505
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
+ A Q+ EL+ + YVL+SN+YAA+ Q+ + R M+E I K PGCS I
Sbjct: 506 EVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 560
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/492 (37%), Positives = 305/492 (61%), Gaps = 8/492 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+H +++K+G D + ++ G + A VF +I + ++ WN +I +
Sbjct: 136 EKVHGYVVKSGF--DACVCNSVMGM-YGALGKMEVAKKVFDEIPERDVVSWNVLISSYVG 192
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+AI +F M S ++ T S A + L G ++H R V LE
Sbjct: 193 HRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIH-RYVDAELEMTTK 251
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I N ++ MY CG + +AR +FDE+ + +V+ W SM+ G A G +DE+R LF++ R
Sbjct: 252 IGNALLDMYCKCGCVDKARAIFDEMGNK-NVICWTSMVSGYASNGSLDEARELFERSPVR 310
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V W +MI+GYV+ F EAL+LFR+MQ Q ++P F +V+LL CA+ GA+ QG+W+H
Sbjct: 311 DIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLH 370
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N L+ +V TA++D+Y KCGC E+AL+VF + ++ + W S+++GLA+NG +
Sbjct: 371 GYIHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTS 430
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A+ FS ++ + +PD I+FI VLTACNH G V + + YF MT+TYKI+P +HYSC+
Sbjct: 431 KALDFFSQMEEAGFRPDDITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCL 490
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAII---WGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+D L RAGLL+EAE L+ +P + I+ + SLLSACR +GN++M+++ +++ ++
Sbjct: 491 IDLLCRAGLLDEAELLLEMIPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEV 550
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+S + L++++YA++ ++E+ R MKE+ I K PGCS IEV+G +HEF+ GG H
Sbjct: 551 KDSSVHTLLASVYASANRWEDVTTVRRKMKELGIRKFPGCSSIEVNGVLHEFMVGGPSHM 610
Query: 482 KAPEVYLLLNDL 493
+ +++ +L +
Sbjct: 611 EMDDIHSVLGQV 622
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 206/430 (47%), Gaps = 71/430 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTII 59
M L +IHA + + GL + ++I+ FCT P+ G I YA V ++ P L ++N +I
Sbjct: 29 MAHLTQIHAKIFRVGLQDNMDTLTKIVLFCTDPSRGSIRYAERVLGFVQSPCLVMYNLMI 88
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ ++ R ++LF + L + P T P +FKA LG +G ++HG VVK G
Sbjct: 89 KAVAKDENFRKVLVLFSE-LRKQGLNPDNFTLPPVFKAMGCLGKVVEGEKVHGYVVKSG- 146
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
FD + N+++ MY G + A+ +FDE+ E DVV+W
Sbjct: 147 -FDACVCNSVMGMYGALGKMEVAKKVFDEI-PERDVVSW--------------------- 183
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIR 238
N +IS YV + KF++A+ +FR M +E N+K E T+VS L+AC+ L
Sbjct: 184 ----------NVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQE 233
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
GE IH ++ E+ T + A++DMYCKCGC ++A +F+ + K + CW SMV G A
Sbjct: 234 VGEEIHRYVDAE-LEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYA 292
Query: 299 MNG--------YE-----------------------NEAIKLFSGLQSSNLKPDYISFIA 327
NG +E +EA+KLF +Q L+PD +
Sbjct: 293 SNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVT 352
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
+L C +G + Q K + E I + +VD + G +E+A ++ M +
Sbjct: 353 LLKGCAQTGALEQGKWLHGYIHEN-SITLDRVVGTALVDVYAKCGCVEKALEVFYEM-KE 410
Query: 388 PDAIIWGSLL 397
D W S++
Sbjct: 411 RDTASWTSVI 420
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 144/290 (49%), Gaps = 12/290 (4%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G I + R+ + S V +N MI ++ F++ L LF E+++Q + P FT+ +
Sbjct: 64 GSIRYAERVLGFVQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVF 123
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
A LG + +GE +H ++V + F + V +++ MY G E A +VF+ +P++ +
Sbjct: 124 KAMGCLGKVVEGEKVHGYVVKSGF--DACVCNSVMGMYGALGKMEVAKKVFDEIPERDVV 181
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
WN ++ + +AI +F + + SNLK D + ++ L+AC+ ++
Sbjct: 182 SWNVLISSYVGHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRY 241
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ ++ I + ++D + G +++A + M + + I W S++S +G+++
Sbjct: 242 VDAELEMTTKIGN--ALLDMYCKCGCVDKARAIFDEM-GNKNVICWTSMVSGYASNGSLD 298
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK 457
A++ ++ D + M N Y F+EA++ L ++++I++
Sbjct: 299 EARELFERSPVRD---IVLWTAMINGYVQFNLFDEALK---LFRKMQIQR 342
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 355 bits (911), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 307/503 (61%), Gaps = 8/503 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K LK+ H +I TGL +D + ++ + C S AG + YAY VFT PN ++ NT+IR
Sbjct: 28 LKTLKQSHCFMIITGLNRDNLNVAKFIEAC-SNAGHLRYAYSVFTHQPFPNTYLHNTMIR 86
Query: 61 GFSQSSTPRNAILLFIDM---LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
S RNA + I + +P T+P + K ++ G Q+HG+ V
Sbjct: 87 ALSLVD-ERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQAVVF 145
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G + + +I MY++CG L +AR +FDE+ DV WN+++ G K GE+DE+R L
Sbjct: 146 GFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVR-DVNVWNALLAGYGKVGEMDEARGL 204
Query: 178 FDKMVS--RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+ M RN VSW +ISGY R+ + EA+E+F+ M +N+ P E T++++L+ACA LG
Sbjct: 205 LEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLG 264
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
++ GE I +++ + A+IDMY K G +AL+VF +V ++ + W +++
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIIT 324
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
GLA +G+ EA+ +F + + +KP+ ++FIA+L+AC+H G V+ +F M Y I
Sbjct: 325 GLATHGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGIN 384
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P+I+HY CM+D LGRAG L EAE++I+SMP + +A IWGSLL+A H +I++ ++A Q
Sbjct: 385 PNIEHYGCMIDLLGRAGKLREAEEVIKSMPFESNAAIWGSLLAASNVHHDIDVGERALYQ 444
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+I+L+ N S Y+L++NLY+ +++E+ R +MK + ++K G S IEV+ V++F++
Sbjct: 445 LIKLEPNNSGNYMLLANLYSNLGRWDESRMMRKMMKGIGVKKLAGESSIEVENRVYKFIS 504
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQ 498
G HP+ +++ LL ++ L IQ
Sbjct: 505 GDLSHPQVEKIHELLQEMDLQIQ 527
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 185/485 (38%), Positives = 284/485 (58%), Gaps = 38/485 (7%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA LI+ G ++DP +L C S I+YA +F PN++++ +I GF S
Sbjct: 51 IHAQLIRNGHSQDPFMVFELLRSC-SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSG 109
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
+AI L+ ML S I P S+ KA R+G ++H R +K GL ++ +
Sbjct: 110 NYFDAIQLYSRMLHDS-ILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVR 168
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM----V 182
I+ +Y KCGE+ ++RR+F++M V
Sbjct: 169 LRIMELYG--------------------------------KCGELGDARRVFEEMPEDVV 196
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+++TV W +MI G+VRN + ALE FR MQ +N++P+EFT+V +L+AC++LGA+ G W
Sbjct: 197 AKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRW 256
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H+++ ELN V A+I+MY +CG + A VF+ + + + +N+M+ GL+MNG
Sbjct: 257 VHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGK 316
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+AI+LF + L+P ++F+ VL AC+H G V+ F MT Y ++P I+HY
Sbjct: 317 SRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYG 376
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD LGR G LEEA LIR+M PD I+ G+LLSAC+ H N+E+ +Q AK + + +
Sbjct: 377 CMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQA 436
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+S YVL+S++YA+S +++EA + R MKE ++KEPGCS IEV+ E+HEF+ G HP+
Sbjct: 437 DSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPR 496
Query: 483 APEVY 487
+Y
Sbjct: 497 KERIY 501
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 131/287 (45%), Gaps = 39/287 (13%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKK----PNLFIWN 56
+++ +++H+ +K GL+ + + RI+ G++ A VF ++ + + W
Sbjct: 146 LREGREVHSRALKLGLSSNRLVRLRIMEL-YGKCGELGDARRVFEEMPEDVVAKDTVCWT 204
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+I GF ++ A+ F M + ++P T + A +QLG G +H + K
Sbjct: 205 AMIDGFVRNEEMNRALEAFRGMQGEN-VRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK 263
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
+E + F+ N +I MY+ CG + EA+ +FDE+ + DV+ +N+MI GL+ G
Sbjct: 264 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEM-KDRDVITYNTMISGLSMNG------- 315
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
K ++A+ELFR M + ++P+ T V +LNAC+ G
Sbjct: 316 ------------------------KSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGL 351
Query: 237 IRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
+ G + H+ E ++D+ + G E A + T+
Sbjct: 352 VDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM 398
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 174/453 (38%), Positives = 278/453 (61%), Gaps = 9/453 (1%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A LV + + + + + + +IR + S P+ A+ L+ L+ + + P T PSL K+ A
Sbjct: 41 AALVTSGLLRRSAELHDALIRAHASSGRPQAALPLYAH-LIRAGLFPTPHTLPSLLKSLA 99
Query: 100 QLGLARDGAQ-----LHGRVVKQGLEFDQFIHNTIIYMYANC-GFLSEARLMFDEVDTEF 153
L A GA+ +H V+ GL ++N +I ++A G L++A L+
Sbjct: 100 -LSPAVPGARRLALAVHAHAVRLGLAGFLLVNNALIRVHAGLLGRLADAHLLL-RTSAAV 157
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
D +N++I A+ G + ++R LFD+M RN VSW++M++GYV+ +EAL +F +MQ
Sbjct: 158 DASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGREALGVFSQMQ 217
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
Q ++P + +V +L ACA+LGA+ QG+W+H +L N + + TA++DMY KCG +
Sbjct: 218 AQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCGEVQ 277
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
++VF + K + W +M+ GLAM+G ++++ LFS ++SS +KPD I+FI L AC
Sbjct: 278 LGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALCACT 337
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
H+G V++ ++ F M Y IKP I+HY CMVD L R GLL EA ++ MP PDA+IW
Sbjct: 338 HTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKPDALIW 397
Query: 394 GSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEV 453
G+L++ CR H N+E+A+ K IEL+ ++S YVL+ N+Y+AS + A E R LM+E
Sbjct: 398 GALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIRNLMREK 457
Query: 454 KIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
+EK PGCS +E+ G +H+F+ G HP+ ++
Sbjct: 458 GVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDI 490
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G++ VF +K N+ W T+I+G + +++ LF M +S ++P + +
Sbjct: 274 GEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQM-ESSGVKPDDIAFIGA 332
Query: 95 FKAYAQLGLARDGAQLHGRVVKQ-GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
A GL G +L +V G++ + ++ + A G LSEAR M +++ +
Sbjct: 333 LCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMPMKP 392
Query: 154 DVVAWNSMIIG 164
D + W +++ G
Sbjct: 393 DALIWGALMAG 403
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 177/433 (40%), Positives = 274/433 (63%), Gaps = 4/433 (0%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S +G ++ A +F +I ++ W TII G+ Q A+ ++ ML T + P +
Sbjct: 261 SKSGLVDLARDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTG-VGPNEVMI 319
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
L A + +G Q HG +V+ G + FI TII+ YA CG ++ A L F E+ +
Sbjct: 320 VDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQF-ELGS 378
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ V +WN++I G + G I+++R+LFD+M R+ SW+SMISGY +N + AL+LF E
Sbjct: 379 KDHVSSWNALISGFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHE 438
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M ++P+E TMVS+ +A A LG + +G W H ++++N LN + A+IDMY KCG
Sbjct: 439 MVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGS 498
Query: 272 PERALQVFNTVPKK--GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
ALQ+F + + +S WN+++ GLAM+G+ N ++KLFS LQ +KP+ I+FI VL
Sbjct: 499 ITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVL 558
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
+AC H+G V+ + YF M Y I+P+IKHY CM+D LGRAG L+EA ++IR MP D
Sbjct: 559 SACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKAD 618
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
+IWG+LL+ACR HGN+E+ ++AA+ + +LD + G VL+SN+YA + ++++A R
Sbjct: 619 VVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRA 678
Query: 450 MKEVKIEKEPGCS 462
M+ +++K PGCS
Sbjct: 679 MQSQRMKKSPGCS 691
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 214/439 (48%), Gaps = 38/439 (8%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRN 70
L T DP++ + +LA +G ++ A +F ++ + T++ G +Q++
Sbjct: 109 LFDTCSVLDPVSCNIMLAGYVK-SGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLE 167
Query: 71 AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTII 130
AI +F DM I P +T S+ AY+ +G + LH K GLE + ++
Sbjct: 168 AIGVFKDMRFAGVI-PNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLV 226
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
+MY C L AR++FDE+ E +VV WN M+ G +K G +D +R LF+++ +++ VSW
Sbjct: 227 HMYCVCSSLGNARVLFDEI-PERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWG 285
Query: 191 SMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN 250
++I GYV+ + EAL ++R M + P+E +V L++AC + A+ +G+ H +V
Sbjct: 286 TIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRT 345
Query: 251 CFELNTIVVTAIIDMYCKC-------------------------------GCPERALQVF 279
F+ + II Y C G E+A Q+F
Sbjct: 346 GFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLF 405
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+ +P++ + W+SM+ G + N + A++LF + + ++P+ I+ ++V +A G +
Sbjct: 406 DEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLM 465
Query: 340 QAK-DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII-WGSLL 397
+ + + +++ + + ++ + ++D + G + A +L + ++ W +++
Sbjct: 466 EGRWAHEYILSNSIPLNDNLN--AALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAII 523
Query: 398 SACRKHGNIEMAKQAAKQI 416
HG+ ++ + Q+
Sbjct: 524 CGLAMHGHANVSLKLFSQL 542
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 192/422 (45%), Gaps = 69/422 (16%)
Query: 89 LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE 148
LT S K+ + L G Q+H V K GL + F+ N++I Y C +S AR +FD
Sbjct: 53 LTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDT 112
Query: 149 VDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
D V+ N M+ G K G +D +R LF+KM + VS+ +M+ G +N + EA+ +
Sbjct: 113 CSV-LDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
F++M+ + P+E T+ S+++A + +G I +H E IV T ++ MYC
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCV 231
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMV--------------------------FGLAMNGY 302
C A +F+ +P++ + WN M+ +G ++GY
Sbjct: 232 CSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGY 291
Query: 303 E-----NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET----YK 353
EA++++ + + + P+ + + +++AC + V++ + + ++ T Y
Sbjct: 292 VQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYD 351
Query: 354 -IKPSIKHY-------------------------SCMVDALGRAGLLEEAEKLIRSMPSD 387
I+ +I H+ + ++ R G++E+A +L MP +
Sbjct: 352 FIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMP-E 410
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQIIE--LDKNESCGYVLMSNLYAASYQFEEAME 445
D W S++S ++ ++A Q +++ + NE + M ++++A ME
Sbjct: 411 RDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNE----ITMVSVFSAIATLGTLME 466
Query: 446 ER 447
R
Sbjct: 467 GR 468
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 43/236 (18%)
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC----------- 269
E T+VS L +C+ L A+ QG+ IH+ + + N V ++I Y KC
Sbjct: 52 ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111
Query: 270 --------------------GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
G + A +F +P KG + +MV GLA N EAI +
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY----FTLMTETYKI-KPSIKHYSCM 364
F ++ + + P+ ++ +V++A +H G + + F L E I ++ H C+
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCV 231
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+LG A +L + +P + + + W +L+ K G +++A+ ++I D
Sbjct: 232 CSSLGNARVLFD------EIP-ERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKD 280
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 200/504 (39%), Positives = 297/504 (58%), Gaps = 47/504 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAA---SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
M LK+IHA +++ L SRIL F S D+NYAY VF Q+ PN F+WN
Sbjct: 35 MSQLKQIHALSLRSTLPNHSTTLFLYSRILHF--SSLHDLNYAYRVFDQVDNPNSFMWNI 92
Query: 58 IIRGFSQSST---PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
+IR +QS + R AILL+ ML S P T+P + KA A L +G Q H +
Sbjct: 93 LIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLKACAYLFALFEGKQAHAHL 152
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
+K G + D +I+N++I+ YA+ CG ++ +
Sbjct: 153 LKLGFQSDVYINNSLIHFYAS--------------------------------CGSLESA 180
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
+ +FDKM R+ VSWN+MI +V +F+ AL+LF + Q+Q +P +T+ S++NACA L
Sbjct: 181 KNVFDKMPQRSLVSWNAMIDAFVLFGEFETALQLFVQFQQQFFEPDGYTIQSVINACAGL 240
Query: 235 GAIRQGEWIHNFLVTNC----FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
A+ G W H FL+ NC + +V +++DMYCKCG + A Q+F + K ++ W
Sbjct: 241 CALSLGMWAHAFLLRNCGVSVARDHVLVNNSLLDMYCKCGSLDIATQIFEGMQKHDVTSW 300
Query: 291 NSMVFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
NSM+ G AM+G A++ F + + S P+ I+F+ VL+ACNH VN+ + YF +M
Sbjct: 301 NSMILGFAMHGKGELALECFERMIRISRFVPNSITFVGVLSACNHRYMVNEGRKYFDMMV 360
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLL-SACRKHGNIEM 408
YKI+P ++HY C+VD L RAGL++EA +L+ SMP PD +IW SLL S C+K+ ++E+
Sbjct: 361 NEYKIEPQLEHYGCLVDILARAGLIDEALELVASMPMKPDVVIWRSLLDSCCKKNASVEL 420
Query: 409 AKQAAKQIIELDKNESCG-YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
++ A+QI+E ++ +S G YVL+S +YA++ ++ + R LM I KEPGCSLIEVD
Sbjct: 421 SENIARQILESEEADSSGVYVLLSRVYASASRWNDVGLVRKLMTNNGILKEPGCSLIEVD 480
Query: 468 GEVHEFVAGGRLHPKAPEVYLLLN 491
G HEF AG HP+ E+Y +LN
Sbjct: 481 GVTHEFFAGDTSHPQTKEIYQVLN 504
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 354 bits (908), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 267/423 (63%), Gaps = 1/423 (0%)
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
+V ++P + T ++ KA A + G Q H ++K G E D + +++MYA CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
L +A +FD++ +E WN+MI G A+ ++ ++ +LF +M R+ VSW ++I+GY +
Sbjct: 61 LEDAGHVFDKM-SERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQ 119
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
N E+L +F +M++ +K F M S+L+ACA L A+ G H ++V + F L+ +V
Sbjct: 120 NGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVV 179
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
+A++DMY K G E A QVF+ +P++ WNS++ G A +G N+A+ LF + + +
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGI 239
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
KP+ ISF+ VL+AC+H+G VN+ + YF LMT+ Y I P + HY+CM+D LGRAG L+EAE
Sbjct: 240 KPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAE 299
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASY 438
I MP +PD +WG+LL ACR HGN E+AK+ A+ ++ ++ + YVL+SN+YAA+
Sbjct: 300 NFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAG 359
Query: 439 QFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQ 498
Q+++A + R LMK+ + K+PG S IEV +H FVAG HP+ E++ L L ++
Sbjct: 360 QWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMK 419
Query: 499 EMG 501
G
Sbjct: 420 AAG 422
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++ HA+++++G A D + S ++ + +G + A VF ++ + N WN+II G +Q
Sbjct: 162 RQFHAYVVQSGFALDIVVGSALVDM-YAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQ 220
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQ 123
+A+LLF ML + I+P +++ + A + GL +G + + G+ D
Sbjct: 221 HGRGNDAVLLFEQML-QAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDV 279
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ +I + G L EA + + E DV W +++ G + ++R+ + ++
Sbjct: 280 SHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLG 339
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 183/483 (37%), Positives = 287/483 (59%), Gaps = 34/483 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ + A+ +K GL D S ++ S GD+ A LVF ++ + +WN I+ + +
Sbjct: 140 RGVQAYAVKRGLVADRFVLSSLIHMYAS-CGDVAAARLVFDAAEESGVVMWNAIVAAYLK 198
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ + +F ML + +T S+ A ++G A+ G + G V ++GL +
Sbjct: 199 NGDWMEVVEMFKGMLEVG-VAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPK 257
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA KCGEI ++RRLFD M SR
Sbjct: 258 LVTALMDMYA--------------------------------KCGEIGKARRLFDGMQSR 285
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V+W++MISGY + + +EAL LF EMQ ++P++ TMVS+L+ACA LGA+ G+W+H
Sbjct: 286 DVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVH 345
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+++ L TI+ TA++D Y KCGC + A++ F ++P K W +++ G+A NG
Sbjct: 346 SYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGR 405
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA++LFS ++ + ++P ++FI VL AC+HS V + + +F M Y IKP ++HY CM
Sbjct: 406 EALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCM 465
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAGL++EA + IR+MP +P+A+IW +LLS+C H N+ + ++A KQII L+ + S
Sbjct: 466 VDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHS 525
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+SN+YA++ Q+++A R MK+ IEK PGCSLIE+DG V EF A HP+
Sbjct: 526 GDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELR 585
Query: 485 EVY 487
E+Y
Sbjct: 586 EIY 588
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 100/217 (46%), Gaps = 4/217 (1%)
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM--QEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+T +N ++ ++ ++AL LF EM + T L +C+++ A+ G
Sbjct: 82 STPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRG 141
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+ + V + V++++I MY CG A VF+ + G+ WN++V NG
Sbjct: 142 VQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGD 201
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
E +++F G+ + D ++ ++V+TAC G K + + + + K +
Sbjct: 202 WMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGK-WVAGHVDEEGLARNPKLVT 260
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
++D + G + +A +L M S D + W +++S
Sbjct: 261 ALMDMYAKCGEIGKARRLFDGMQSR-DVVAWSAMISG 296
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 353 bits (907), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 185/503 (36%), Positives = 307/503 (61%), Gaps = 8/503 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K LK+ H ++I TGL +D + ++ + C S AG + YAY VFT PN ++ NT+IR
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEAC-SNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 61 GFSQSSTPRN---AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
S P AI ++ + +P T+P + K ++ G Q+HG+VV
Sbjct: 87 ALSLLDEPNAHSIAITVYRKLWALCA-KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 145
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G + + +I MY +CG L +AR MFDE+ + DV WN+++ G K GE+DE+R L
Sbjct: 146 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK-DVNVWNALLAGYGKVGEMDEARSL 204
Query: 178 FDKMVS--RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+ M RN VSW +ISGY ++ + EA+E+F+ M +N++P E T++++L+ACA LG
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
++ GE I +++ + A+IDMY K G +AL VF V ++ + W +++
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
GLA +G+ EA+ +F+ + + ++P+ ++FIA+L+AC+H G V+ K F M Y I
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIH 384
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P+I+HY CM+D LGRAG L EA+++I+SMP +A IWGSLL+A H ++E+ ++A +
Sbjct: 385 PNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSE 444
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+I+L+ N S Y+L++NLY+ +++E+ R +MK + ++K G S IEV+ V++F++
Sbjct: 445 LIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFIS 504
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQ 498
G HP+ ++ +L ++ L IQ
Sbjct: 505 GDLTHPQVERIHEILQEMDLQIQ 527
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 186/486 (38%), Positives = 288/486 (59%), Gaps = 40/486 (8%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA LI+ G ++DP +L C S I+YA +F PN++++ +I GF S
Sbjct: 58 IHAQLIRNGHSQDPFMVFELLRSC-SKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSG 116
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY-AQLGLARDGAQLHGRVVKQGLEFDQFI 125
AI L+ ML S I P S+ KA +QL L R+G ++H R +K G ++ +
Sbjct: 117 NYLEAIQLYSRMLHES-ILPDNYLMASILKACGSQLAL-REGREVHSRALKLGFSSNRLV 174
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM---- 181
I+ +Y KCGE+ ++RR+F++M
Sbjct: 175 RLRIMELYG--------------------------------KCGELGDARRVFEEMPEDV 202
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
V+++TV W +MI G+VRN + ALE FR MQ +N++P+EFT+V +L+AC++LGA+ G
Sbjct: 203 VAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGR 262
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
W+H+++ ELN V A+I+MY +CG + A VF+ + + + +N+M+ GL+MNG
Sbjct: 263 WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNG 322
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+AI+LF + L+P ++F+ VL AC+H G V+ + F M Y+++P I+HY
Sbjct: 323 KSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHY 382
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD LGR G LEEA LIR+M PD I+ G+LLSAC+ H N+E+ +Q AK++ + +
Sbjct: 383 GCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQ 442
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+S YVL+S++YA+S +++EA + R MKE ++KEPGCS IEV+ E+HEF+ G HP
Sbjct: 443 ADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGDLRHP 502
Query: 482 KAPEVY 487
+ +Y
Sbjct: 503 QKERIY 508
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 39/287 (13%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKK----PNLFIWN 56
+++ +++H+ +K G + + + RI+ G++ A VF ++ + + W
Sbjct: 153 LREGREVHSRALKLGFSSNRLVRLRIMEL-YGKCGELGDARRVFEEMPEDVVAKDTVCWT 211
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+I GF ++ A+ F M + ++P T + A +QLG G +H + K
Sbjct: 212 AMIDGFVRNEETNRALEAFRGMQGEN-VRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK 270
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
+E + F+ N +I MY+ CG + EA+ +FDE+ + DV+ +N+MI GL+ G
Sbjct: 271 FEIELNLFVGNALINMYSRCGSIDEAQTVFDEM-KDRDVITYNTMISGLSMNG------- 322
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
K ++A+ELFR M + ++P+ T V +LNAC+ G
Sbjct: 323 ------------------------KSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGL 358
Query: 237 IRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
+ G E H+ E ++D+ + G E A + T+
Sbjct: 359 VDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM 405
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 300/503 (59%), Gaps = 45/503 (8%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTS--------PAGDINYAYLVFTQIKKPNLFIW 55
LK+IHA +I GL + + R L T+ + I YA +F QI +P+ F+W
Sbjct: 17 LKQIHALMIVNGLTSN-VGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDTFMW 75
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
NT IRG SQS P +A+ L+ M S ++P T+P + KA +L G+ +HGRV+
Sbjct: 76 NTYIRGSSQSHDPVHAVALYAQMDQRS-VKPDNFTFPFVLKACTKLFWVNTGSAVHGRVL 134
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA--------- 166
+ G + + NT++ +A CG L A +FD+ D + DVVAW+++I G A
Sbjct: 135 RLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSD-KGDVVAWSALIAGYAQRGDLSVAR 193
Query: 167 ----------------------KCGEIDESRRLFDKMVSRNTVSWNSMISGYV-RNVKFK 203
K GE++ +RRLFD+ ++ VSWN++I GYV RN+ +
Sbjct: 194 KLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLN-R 252
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV-TNCFELNTIVVTAI 262
EALELF EM P E TM+SLL+ACA LG + GE +H ++ N +L+T++ A+
Sbjct: 253 EALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEMNKGKLSTLLGNAL 312
Query: 263 IDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
+DMY KCG +A++VF + K + WNS++ GLA +G+ E++ LF ++ + + PD
Sbjct: 313 VDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCPDE 372
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
++F+ VL AC+H+G V++ YF LM YKI+P+I+H C+VD LGRAGLL+EA I
Sbjct: 373 VTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNFIA 432
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEE 442
SM +P+AI+W SLL AC+ HG++E+AK+A +Q++ + ++S YVL+SN+YA+ +++
Sbjct: 433 SMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLSNVYASQGEWDG 492
Query: 443 AMEERLLMKEVKIEKEPGCSLIE 465
A R LM + + K G S +E
Sbjct: 493 AENVRKLMDDNGVTKNRGSSFVE 515
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 175/421 (41%), Positives = 265/421 (62%), Gaps = 4/421 (0%)
Query: 84 IQPQRLTYPSLFKAYAQLGLA--RDGAQLHGRVVKQGLEFDQFIHNT-IIYMYANCGFLS 140
++P +T+ +L A L R G +H V K GL+ + + T ++ MY+ CG L
Sbjct: 85 VRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLD 144
Query: 141 EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNV 200
A LMFDE+ + V+WN+MI G + GE+ E+ LFD+M R+ +SW SMI G+V+
Sbjct: 145 LAWLMFDEMHVR-NSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKG 203
Query: 201 KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
F++ALE FREMQ ++P T++S+L ACA LGA+ G WI+ F++ F+ N +
Sbjct: 204 CFEQALEWFREMQLAGVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISN 263
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
++IDMY +CGC A QVF +PK+ L WNSM+ G A+NG+ EA++ F+ ++ +P
Sbjct: 264 SLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRP 323
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
D +SF LTAC+HSG V++ +F +M T KI P I+HY C+VD RAG LE+A +
Sbjct: 324 DGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNV 383
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQF 440
I +MP P+ ++ GSLL+ACR HG++ +A++ K + E+D YVL+SN+YAA ++
Sbjct: 384 IANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRW 443
Query: 441 EEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEM 500
+ A + R MK + I K+PG S IE+DG +HEFVAG + H + +Y +L+ L L ++
Sbjct: 444 DGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHVETQNIYAMLDHLFLELRIC 503
Query: 501 G 501
G
Sbjct: 504 G 504
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 36/257 (14%)
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK--LGAIRQGEWIH 244
VSW S I+ + RN + EA F MQ ++P+ T ++LL+AC L +R G IH
Sbjct: 55 VSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIH 114
Query: 245 NFLVTNCFEL-NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
++ + N +V TA++DMY KCG + A +F+ + + WN+M+ G NG
Sbjct: 115 AYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEV 174
Query: 304 NEAIKLFSG-------------------------------LQSSNLKPDYISFIAVLTAC 332
EAI LF +Q + ++PDY++ I+VL AC
Sbjct: 175 GEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAAC 234
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+ G + + K +IK + ++D R G + A ++ MP +
Sbjct: 235 ANLGALGLGL-WINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKR-SLVS 292
Query: 393 WGSLLSACRKHGNIEMA 409
W S++ +G+ E A
Sbjct: 293 WNSMIVGFALNGHAEEA 309
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 127/310 (40%), Gaps = 63/310 (20%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA++ K GL + + L S G ++ A+L+F ++ N WNT+I G ++
Sbjct: 113 IHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNG 172
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
AI+LF M + + ++P +T S+
Sbjct: 173 EVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLA 232
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A LG G ++ V+KQ + + I N++I MY+ CG + AR +F+++ +V
Sbjct: 233 ACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKR-SLV 291
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNSMI+G A G + EALE F M+++
Sbjct: 292 SWNSMIVGFALNGHAE-------------------------------EALEFFNLMRKEG 320
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFL-VTNCFELNTIVVTAIIDMYCKCGCPERA 275
+P + L AC+ G + +G + + T ++D+Y + G E A
Sbjct: 321 FRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDA 380
Query: 276 LQVFNTVPKK 285
L V +P K
Sbjct: 381 LNVIANMPMK 390
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/456 (39%), Positives = 284/456 (62%), Gaps = 10/456 (2%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
I A L Q+ + ++ + + +IR S+S+ P A+ L+ +L + + P T PSL K
Sbjct: 23 IQAALLTSGQLPR-SVELHDALIRALSRSARPHLALPLYAHLL-RAGLLPTPHTLPSLLK 80
Query: 97 AYAQLGLARDGA-----QLHGRVVKQGLEFDQFIHNTIIYMYAN-CGFLSEARLMFDEVD 150
+ A L A GA +H VK GL+ + N +I ++A G L++ L+
Sbjct: 81 SMA-LSPAVPGAAVLALTVHTHAVKLGLDRFVLVSNALIRVHAGFLGSLADGLLLL-RTA 138
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
D +N++I A+ G + ++R LFD+M +RN VSW++M++GYV+ +EAL +F
Sbjct: 139 AAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAGDGREALRIFA 198
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
MQ ++++P + +V +L ACA+ GA+ QG+W+H +L + ++N TA++DMY KCG
Sbjct: 199 RMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYLKAHGIKINLFFGTALVDMYSKCG 258
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
+ A+ VF + K + W +M+ GLAM+G +EA+ LF+ ++SS ++PD I+FI VL
Sbjct: 259 EVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGIRPDDIAFIGVLC 318
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC H+G V++ ++ F M Y IKP I+HY CMVD L R G L EA+++I+ MP +PDA
Sbjct: 319 ACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMPMEPDA 378
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
+IWG+L++ CR H N+E A+ AK I L+ ++S YVL+SN+YAAS + A E R LM
Sbjct: 379 LIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASGRHASAREIRHLM 438
Query: 451 KEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
+E ++K PGCS +EV+G +H+F+ G HP+ ++
Sbjct: 439 REKGVDKTPGCSTVEVNGVIHQFIVGDLSHPRIKDI 474
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S G++ A VF +++ N+ W T+I+G + A++LF M +S I+P + +
Sbjct: 255 SKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQM-ESSGIRPDDIAF 313
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
+ A GL G +L +V++ G++ + ++ + A GFL EA+ M ++
Sbjct: 314 IGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAKEMIQKMP 373
Query: 151 TEFDVVAWNSMIIG 164
E D + W +++ G
Sbjct: 374 MEPDALIWGALMAG 387
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 191/533 (35%), Positives = 299/533 (56%), Gaps = 35/533 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ + KKIH H +K D ++ S + A +F +I P++ +WN IIR
Sbjct: 24 LTEAKKIHQHFLKNTSNADSSVLHKLTRLYLS-CNQVVLARRLFDEIPNPSVILWNQIIR 82
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++ + AI L+ ML ++P + TYP + KA + L DG ++H GLE
Sbjct: 83 AYAWNGPFDGAIDLYHSMLHLG-VRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLE 141
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES------ 174
D F+ ++ YA CG L EA+ +F + + DVVAWN+MI G + G D++
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSM-SHRDVVAWNAMIAGCSLYGLCDDAVQLIMQ 200
Query: 175 --------------------------RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
R++FD M RN VSW++MI GYV + KEAL++
Sbjct: 201 MQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDI 260
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
FR MQ I P TM+ +L AC+ L A++ G H +L+ F +T++ A+IDMY K
Sbjct: 261 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSK 320
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG A +VFN + + + WN+M+ G ++G EA+ LF L + LKPD I+FI +
Sbjct: 321 CGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICL 380
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L++C+HSG V + + +F M+ + I P ++H CMVD LGRAGL++EA IR+MP +P
Sbjct: 381 LSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEP 440
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D IW +LLSACR H NIE+ ++ +K+I L + +VL+SN+Y+A+ ++++A R+
Sbjct: 441 DVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRI 500
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
K+ ++K PGCS IE++G VH FV G + H + ++ L +L + ++ +G
Sbjct: 501 TQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLG 553
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 134/314 (42%), Gaps = 43/314 (13%)
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
Y L +A Q + ++H +K D + + + +Y +C + AR +FDE+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
V+ WN +I Y N F A++L+
Sbjct: 70 PNP-SVILWN-------------------------------QIIRAYAWNGPFDGAIDLY 97
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
M ++P+++T +L AC+ L AI G IH+ E + V TA++D Y KC
Sbjct: 98 HSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKC 157
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G A ++F+++ + + WN+M+ G ++ G ++A++L +Q + P+ + + VL
Sbjct: 158 GILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP---S 386
C + A+ F +M ++ +S M+ + ++EA + R M
Sbjct: 218 PTCQ---CLLYARKIFDVMGVRNEVS-----WSAMIGGYVASDCMKEALDIFRMMQLSGI 269
Query: 387 DPDAIIWGSLLSAC 400
DPD +L AC
Sbjct: 270 DPDLTTMLGVLPAC 283
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
+ LL AC + ++ + + IH + N ++ V+ + +Y C A ++F+ +P
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
+ WN ++ A NG + AI L+ + ++P+ ++ VL AC+ + +
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ + + ++ + + +VD + G+L EA++L SM S D + W ++++ C +G
Sbjct: 132 HS-HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSM-SHRDVVAWNAMIAGCSLYG 189
Query: 405 NIEMAKQAAKQIIE 418
+ A Q Q+ E
Sbjct: 190 LCDDAVQLIMQMQE 203
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 181/501 (36%), Positives = 299/501 (59%), Gaps = 10/501 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH H++K GL DP + ++ + G++ YA LVF++ + + +I G++
Sbjct: 152 KQIHGHVLKLGLESDPFVHTSLINM-YAQNGELGYAELVFSKSSLRDAVSFTALITGYTL 210
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+A LF ++ V + ++ ++ YAQ G + + + + ++
Sbjct: 211 RGCLDDARRLFEEIPVRDAV-----SWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNES 265
Query: 125 IHNTIIYMYANCGFL---SEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
T++ A G L + R ++ ++ N++I +KCG++D++R LF+ +
Sbjct: 266 TMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGI 325
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ +SWN MI GY +KEAL LFR+MQ+ N++P++ T VS+L ACA LGA+ G+
Sbjct: 326 CEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGK 385
Query: 242 WIHNFLVTNCFEL-NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
WIH ++ L NT + T++IDMY KCG E A QVF + K L WN+M+ GLAM+
Sbjct: 386 WIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMH 445
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ N A++LF ++ +PD I+F+ VL+AC+H+G V + F+ M E Y I P ++H
Sbjct: 446 GHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQH 505
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CM+D LGRAGL +EAE L+++M PD IWGSLL ACR HGN+E+ + AAK + EL+
Sbjct: 506 YGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELE 565
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
YVL+SN+YA + ++++ R + + ++K PGCS IEVD VHEF+ G ++H
Sbjct: 566 PENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVH 625
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
++ ++Y +L+++ L+++ G
Sbjct: 626 EQSQDIYKMLDEIDQLLEKAG 646
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/540 (34%), Positives = 309/540 (57%), Gaps = 55/540 (10%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++LK+IH+ +IKTGL A S+++ FC SP G+++YA L+F I++PN FIWNT+IR
Sbjct: 46 QNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIR 105
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G S SS+P AI ++ ML+ ++P T+P L K+ A++G ++G Q+HG V+K GLE
Sbjct: 106 GNSLSSSPVGAIDFYVRMLLCG-VEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLE 164
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+H ++I MYA G L A L+F + D V++ ++I G G +D++RRLF++
Sbjct: 165 SDPFVHTSLINMYAQNGELGYAELVFSKSSLR-DAVSFTALITGYTLRGCLDDARRLFEE 223
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ R+ VSWN+MI+GY ++ +F+EAL F+EM+ N+ P+E TMV++L+ACA+ G++ G
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG 283
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA-M 299
W+ +++ + N +V A+IDMY KCG ++A +F + +K + WN M+ G + M
Sbjct: 284 NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM 343
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK----------------D 343
N Y+ EA+ LF +Q SN++P+ ++F+++L AC + G ++ K
Sbjct: 344 NSYK-EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTS 402
Query: 344 YFTLMTETYK--------------IKP-SIKHYSCMVDALGRAGLLEEAEKLIRSMPS-- 386
+T + + Y +KP S+ ++ M+ L G A +L R M
Sbjct: 403 LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 387 -DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG---YVLMSNLYAASYQFEE 442
+PD I + +LSAC G +E+ +Q ++E D + S Y M +L + F+E
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVE-DYDISPKLQHYGCMIDLLGRAGLFDE 521
Query: 443 AMEERLLMKEVKIEKEP-------GCSLIEVDGEVHEFVAGG--RLHPKAPEVYLLLNDL 493
A LMK ++++ + G + + E+ EF A L P+ P Y+LL+++
Sbjct: 522 A---EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNI 578
>gi|357466867|ref|XP_003603718.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355492766|gb|AES73969.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 629
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 189/506 (37%), Positives = 300/506 (59%), Gaps = 11/506 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
MK K+IHAH I L + +SRILAF SP GD YA +FT + PN+F +N+II
Sbjct: 37 MKQTKQIHAHAIANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMPNPNIFDYNSII 96
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
++ +S ++ +F ML + I+P T+ +L K+ L Q+ +K G
Sbjct: 97 TSYTTNSQFDKSLSVFTKMLNMN-IRPNSHTFTTLVKSCVTLSSLE---QVFTLTMKSGN 152
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D + +++I +++ G + AR +FDE +VV W S++ G CG ++E R +FD
Sbjct: 153 SSDVYFVSSVINVFSKHGAIHLARQVFDESSNR-NVVCWTSLVSGYCSCGLVNEVRDVFD 211
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-----IKPSEFTMVSLLNACAKL 234
KM RN S ++M+SGYVRN F E ++LFRE+++++ +K + +VS+LNAC +
Sbjct: 212 KMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVM 271
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA +G+WIH+++ N E + + TA+ID Y KCG + A +VF+ + K ++ W++M+
Sbjct: 272 GAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMI 331
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLA+NG A++LF ++ KP+ ++F+ VLTACNH ++ F +M+E Y I
Sbjct: 332 LGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNI 391
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
PSI+HY C+VD L R+G +++A I SM +PD IWGSLL+ C HG+ E+ ++ K
Sbjct: 392 TPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGK 451
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+IE D S YVL++N+YA ++E E R LMK+ + G S IE+D +H+F
Sbjct: 452 YLIEFDPEHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVVIVYGWSFIEIDQTLHKFS 511
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEM 500
A + + E+Y +L+ LG ++E
Sbjct: 512 ADDKCCLYSGEIYEVLSHLGKKVEEF 537
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 295/490 (60%), Gaps = 2/490 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH +K G + + L + ++ A VF ++ + ++ W T++ G+++
Sbjct: 162 EAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYAR 221
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A LF M+V ++P +T + A Q+GL G LH V + G+
Sbjct: 222 AGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVN 281
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ M+ CG + AR +FD ++ + DV +W SM+ AKCG+++ + +LF M R
Sbjct: 282 LDNALVDMFGKCGCVRYAREVFDGMEVK-DVYSWTSMVNAYAKCGDLESAEQLFKDMPRR 340
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSW+ MI+ Y + + +EA+ LFREM + P + T+VS+L+ACA+LG + G WI+
Sbjct: 341 NVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIY 400
Query: 245 -NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
N++V+N L + A+IDM+ KCG A ++F+ + ++ + WN+M+ A++G
Sbjct: 401 ENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQS 460
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EAI+LF L+ N+ PD I+F+ +L +C+HSG V++ + YF M Y+I+P ++HY+C
Sbjct: 461 EEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYAC 520
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
M+D LG+ GLLEEA ++ R MP + D WG+LL+ACR HGN+E+ A +++ELD ++
Sbjct: 521 MIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSD 580
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S YVLMS +YA+ ++++ R+ M++ ++K PGCS IEV+G+ H+F+ H +
Sbjct: 581 SGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDFLVADVSHACS 640
Query: 484 PEVYLLLNDL 493
E+Y L ++
Sbjct: 641 EEIYSALKNI 650
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 204/429 (47%), Gaps = 21/429 (4%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFC--TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+ L ++HA L TGLA ASR+LAFC ++P + A ++ PN ++ T++
Sbjct: 49 RRLLQLHALLTVTGLAAHRFPASRLLAFCALSTPPRLAHAAAILARASPGPNAYMLGTMM 108
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL------GLARDGAQLHGR 113
RGF ++ P A+ LF +V + T+ KA A G G +H
Sbjct: 109 RGFLRARLPARALGLF-RRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIHCA 167
Query: 114 VVKQGLEFDQ-FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID 172
+K G + + N +++ YAN L +A +FDE+ E DVV+W +++ G A+ G D
Sbjct: 168 ALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEM-PERDVVSWTTLVDGYARAGLAD 226
Query: 173 ESRRLFDKMV-----SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
E+ RLF +MV N V+ + +S + + L + + E + S +L
Sbjct: 227 EAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNAL 286
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
++ K G +R + + + + T++++ Y KCG E A Q+F +P++ +
Sbjct: 287 VDMFGKCGCVRYAREVFDGMEVK----DVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNV 342
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
W+ M+ + EA+ LF + ++ + P + ++VL+AC G ++ + +
Sbjct: 343 VSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYEN 402
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ KI ++ + ++D + G + EA KL M ++ + + W +++ A HG E
Sbjct: 403 YIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEM-AERNVVSWNTMIMAHAVHGQSE 461
Query: 408 MAKQAAKQI 416
A + +Q+
Sbjct: 462 EAIRLFEQL 470
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/485 (37%), Positives = 290/485 (59%), Gaps = 39/485 (8%)
Query: 21 IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLV 80
+ I + S G + YA+ +F +I KP++ I N ++RG +QS P + L+ +M
Sbjct: 12 VVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEM-E 70
Query: 81 TSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLS 140
+ P R T+ + KA ++L +G HG+VV+ G ++++ N +I +ANCG L
Sbjct: 71 KRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLG 130
Query: 141 -------------------------------EARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
EA +FDE+ + D VAWN MI G KC
Sbjct: 131 IASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK-DQVAWNVMITGCLKCK 189
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
E+D +R LFD+ ++ V+WN+MISGYV KEAL +F+EM++ P T++SLL+
Sbjct: 190 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 249
Query: 230 ACAKLGAIRQGEWIHNFL-----VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
ACA LG + G+ +H ++ V++ + T + A+IDMY KCG +RA++VF V
Sbjct: 250 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 309
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
+ LS WN+++ GLA++ E +I++F +Q + P+ ++FI V+ AC+HSG+V++ + Y
Sbjct: 310 RDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKY 368
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
F+LM + Y I+P+IKHY CMVD LGRAG LEEA + SM +P+AI+W +LL AC+ +G
Sbjct: 369 FSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYG 428
Query: 405 NIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
N+E+ K A ++++ + K+ES YVL+SN+YA++ Q++ + R + + +++K G SLI
Sbjct: 429 NVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 488
Query: 465 EVDGE 469
E D +
Sbjct: 489 EEDDD 493
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 145/378 (38%), Gaps = 87/378 (23%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H +++ G + + ++ F + GD+ A +F K + W+++ G+++
Sbjct: 101 HGKVVRHGFVLNEYVKNALILFHAN-CGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGK 159
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
A+ LF +M P + Q + + + + +L R ++ D N
Sbjct: 160 IDEAMRLFDEM----PYKDQ-VAWNVMITGCLKCKEMDSARELFDRFTEK----DVVTWN 210
Query: 128 TIIYMYANCGFLSEARLMFDEV---DTEFDVVA--------------------------- 157
+I Y NCG+ EA +F E+ DVV
Sbjct: 211 AMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILET 270
Query: 158 -------------WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
WN++I AKCG ID + +F + R+ +WN++I G + +
Sbjct: 271 ASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEG 329
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
++E+F EMQ + P+E T + ++ AC+ G + +G F L + D
Sbjct: 330 SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR--------KYFSL-------MRD 374
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
MY N P + + MV L G EA F ++S ++P+ I
Sbjct: 375 MY-------------NIEPN--IKHYGCMVDMLGRAGQLEEA---FMFVESMKIEPNAIV 416
Query: 325 FIAVLTACNHSGKVNQAK 342
+ +L AC G V K
Sbjct: 417 WRTLLGACKIYGNVELGK 434
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/504 (37%), Positives = 301/504 (59%), Gaps = 41/504 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKD-PIAASRILAFCTSPAGDI------NYAYLVFTQIKKPNLF 53
+K LK+IHA +I G + +L TS G NYA+ +F QI +P+ F
Sbjct: 15 LKTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDTF 74
Query: 54 IWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR 113
++N +IRG SQS P AI L+ +M ++ T+P + KA +L G+ +HG
Sbjct: 75 MYNVMIRGSSQSPNPLRAISLYTEMH-RHFVKGDSYTFPFVLKACTRLFWVNTGSAVHGM 133
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
V++ G + + NT++ +A CG L+ A +FD+ + DVVAW+S+I G A+ G++
Sbjct: 134 VLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDD-SCKGDVVAWSSLIAGYARRGDLKV 192
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKF------------------------------- 202
+R+LF++M R+ VSWN MI+GYV+ +
Sbjct: 193 ARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLS 252
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH-NFLVTNCFELNTIVVTA 261
K+ALELF EM + P E T++SLL+ACA LG + G+ +H + + +L+T++ A
Sbjct: 253 KQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNA 312
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
+IDMY KCG + +L VF ++ K + WNS++ G+A++G+ E++ LF +Q + + P+
Sbjct: 313 LIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPN 372
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
I+F+ VL AC+H+G++++ YF LM+ YKI+P+I+H CMVD LGRAGLL+EA K I
Sbjct: 373 EITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFI 432
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
SM +P+AIIW +LL+AC+ HG++E+AK A +++ + K+ S YVLMSNLYA+ +++
Sbjct: 433 DSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEWD 492
Query: 442 EAMEERLLMKEVKIEKEPGCSLIE 465
A + R LM + + K G S +E
Sbjct: 493 GAEKVRKLMDDSGVTKIRGSSFVE 516
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 299/500 (59%), Gaps = 34/500 (6%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
DLK I AH+++ L +D S+++ + + +G + YA+ +F+ PNLF+WNTIIRG
Sbjct: 22 DLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRG 81
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+S S +P AI L+ DM + I P T+ + KA +L +G +LH ++VK GL+F
Sbjct: 82 YSISDSPITAIALYRDMFLCG-ISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDF 140
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ + N +I +YA CG +D + +FD+M
Sbjct: 141 ETPLVNGLIKLYA--------------------------------ACGCMDYACVMFDEM 168
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ SW++M+SGY +N + EAL+LFREMQ +N+ FT+ S++ C LGA+ G+
Sbjct: 169 PEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGK 228
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
W+H+++ +++ ++ TA++ MY KCG + AL+VF + ++ ++ W++M+ G A++G
Sbjct: 229 WVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHG 288
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ +A++LF ++ S P+ ++F +VL+AC+HSG V + F M YKI P IKHY
Sbjct: 289 HGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHY 348
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD RAG++ A K I++MP +P+ ++W +LL AC+ HG ++ + +++I++LD
Sbjct: 349 GCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDP 408
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ YVL+SN+YA+ ++ + R LMK+ +K+ G S IE++ VH+F+ G HP
Sbjct: 409 SSPENYVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHP 468
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
+ ++Y +L+ + ++++G
Sbjct: 469 EREKIYGMLHQMARKLKQVG 488
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 291/493 (59%), Gaps = 19/493 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL-----AFC----------TSPAGDINYAYLVFT 45
+K L ++HAH I TGL +S +L AF T+PA YA VF
Sbjct: 28 LKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNASPTTPAALTGYALSVFN 87
Query: 46 QIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLAR 105
+I P+ F +NT+IR + S+P A+++F+ M S + P T+P KA + L
Sbjct: 88 RIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLS-VPPDTHTFPFCLKACSLLPALS 146
Query: 106 DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL 165
LH + K G D F+ NT+I++Y+ L A +F+E + DVV++N++I G
Sbjct: 147 LAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLK-DVVSYNALIGGF 205
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKF-KEALELFREMQEQNIKPSEFTM 224
K G+ D +RRLFDKM R+ VSW ++++GY ++ +A++LF M ++P +
Sbjct: 206 IKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLISTVRPDNIAL 265
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
VS L+ACA+LG + QG+ IH ++ N +N + T ++D+Y KCGC E A ++F + P
Sbjct: 266 VSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIETAREIFESSPD 325
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
K L WN+++ GL M+G + ++ FS + + +KPD +SF+ +L C H+G V +A+++
Sbjct: 326 KNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAGLVCEARNF 385
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
F M Y++ +KHY CM D LGRAGL+ EA ++I MP D +WG +L CR HG
Sbjct: 386 FQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWGGVLGGCRIHG 445
Query: 405 NIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
N+E+A++AA+ ++ L+ + Y +M+++YA + ++E+ R LM +++K PGCSL+
Sbjct: 446 NVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMHSRQVKKNPGCSLV 505
Query: 465 EV-DGEVHEFVAG 476
++ +G H FVAG
Sbjct: 506 QLNNGVFHGFVAG 518
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 293/505 (58%), Gaps = 37/505 (7%)
Query: 1 MKDLKKIHAHLIKTGL--AKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNT 57
M+ L+++HAH++ L + A S+I+AFC SP G+INYA VF QI PN+F WN+
Sbjct: 1 MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
Query: 58 IIRGFSQSST-PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+I+G+SQ T + I LF + T P T + KA A + +G Q+H V+K
Sbjct: 61 LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G F+ +++ Y KC EI +R+
Sbjct: 121 DGFGSSLFVQTSLVNFYG--------------------------------KCEEIGFARK 148
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F++M RN V+W +MISG+ R EA+ELFREMQ+ I+P T+VS+++ACA GA
Sbjct: 149 VFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGA 208
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G W+H ++ + + TA++DMY KCGC ERA QVF +P K + W+SM+ G
Sbjct: 209 LDIGYWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMG 268
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
A +G +AI F + + + PD+++F+AVL+AC H G V++ + +++LM E + I+P
Sbjct: 269 FAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLE-FGIEP 327
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
S++HY C VD L R+GL+EEA ++ +M P+A W SLL C+K + + + A+ +
Sbjct: 328 SVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYL 387
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+EL+ + Y+++SNLY++ Q+E+ E R +MKE I+ PGCS IEVDG VHEFV G
Sbjct: 388 LELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMG 447
Query: 477 GRLHPKAPEVYLLLNDLGLLIQEMG 501
+ HP+ + + ++ + +++ G
Sbjct: 448 DQSHPEVKMLREFMEEMSMRVRDSG 472
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 187/497 (37%), Positives = 292/497 (58%), Gaps = 7/497 (1%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++HA +++ GL D A R L + +G ++++ + + K P + + I S
Sbjct: 42 ELHAAVVRKGLDSDRAVAFR-LQRAYAASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSR 100
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ L DML + + P T + A L L R LH K L D ++
Sbjct: 101 GLHLPGLALLSDML-SEGLLPTAHTLSASLPACRGLSLGR---ALHAYAFKLALSGDSYV 156
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
++ MYA G + AR +FDE+ + VV+ +M+ A G +D++RRLFD + ++
Sbjct: 157 ATALLSMYARAGDAAAARALFDEM-PDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKD 215
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
+ WN+MI GY ++ K EAL+LFR M + +P E T+V +L+A A+LG + G+W+H+
Sbjct: 216 FICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHS 275
Query: 246 FLV-TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ + C +LN V TA++DMYCKCG E A+ VF+ + K + WN+M+ G AM+G
Sbjct: 276 YVKNSRCVQLNVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIVVWNAMINGYAMHGDSR 335
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A+++F L+ L P I+FI +L AC+HSG V + + +F M Y I P I+HY CM
Sbjct: 336 KALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSMEHEYGIDPKIEHYGCM 395
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAGL+EEA L++S+ PDA++W SLL+ACR H N+ + ++ A ++ S
Sbjct: 396 VDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMALGQRIADFLVANGLANS 455
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
Y+L+SN+YAA ++EE R +MK I+KEPGCS IE+D +V+EFVAG HP
Sbjct: 456 GMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCSAIEIDRKVYEFVAGDMSHPCTD 515
Query: 485 EVYLLLNDLGLLIQEMG 501
E+Y +L+ + L++E G
Sbjct: 516 EIYAMLDKMNALVKEHG 532
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 143/352 (40%), Gaps = 70/352 (19%)
Query: 99 AQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAW 158
A AR ++LH VV++GL+ D+ + + Y
Sbjct: 32 AACSTARRASELHAAVVRKGLDSDRAVAFRLQRAY------------------------- 66
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
A G +D S L + T+ + S I + L L +M + +
Sbjct: 67 -------AASGRLDHSLTLLGRTKDPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLL 119
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM------------- 265
P+ T+ + L AC L G +H + ++ V TA++ M
Sbjct: 120 PTAHTLSASLPACRGLS---LGRALHAYAFKLALSGDSYVATALLSMYARAGDAAAARAL 176
Query: 266 ------------------YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
Y G + A ++F+ +P+K CWN+M+ G +G NEA+
Sbjct: 177 FDEMPDPHVVSVTAMLTCYANMGALDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEAL 236
Query: 308 KLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
+LF + S+ +PD ++ + VL+A G V K + + + ++ +++ + +VD
Sbjct: 237 QLFRRMLRSSAEPDEVTVVLVLSAVAQLGTVESGKWLHSYVKNSRCVQLNVRVATALVDM 296
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
+ G LE+A + + + D ++W ++++ HG+ +++A + ++L
Sbjct: 297 YCKCGSLEDAVAVFHGI-GNKDIVVWNAMINGYAMHGD---SRKALEMFVQL 344
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 185/499 (37%), Positives = 288/499 (57%), Gaps = 33/499 (6%)
Query: 4 LKKIHAHLIKTGLA-KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+IHA I+ G+ ++P ++ S + +++A +F QI+ PN+F WNT+IRGF
Sbjct: 51 LKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGF 110
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++S P A+ LF M S I P T+P LFKA A+L G +H VV+ G +
Sbjct: 111 AESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSL 170
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+F+ N++++MY+ GF A ++F+ M
Sbjct: 171 RFVQNSLVHMYSVFGFAESAY--------------------------------QVFEIMS 198
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ V+WNS+I+G+ N EAL L+REM + ++P FTMVSLL+AC +LGA+ GE
Sbjct: 199 YRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGER 258
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H ++V N A++D+Y KCG A +VF+ + ++ + W S++ GLA+NG
Sbjct: 259 VHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGL 318
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
NEA+KLF L+ LKP I+F+ VL AC+H G +++ +YF M E Y I P I+H+
Sbjct: 319 GNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHG 378
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD L RAG + +A IR+MP P+A+IW +LL AC HG++E+ + A +I L++
Sbjct: 379 CMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQR 438
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
S +VL+SNLYA+ ++ + R +M ++K PG SL+E+ V+EF+ G R HP+
Sbjct: 439 HSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQ 498
Query: 483 APEVYLLLNDLGLLIQEMG 501
+ E Y +L + L++ G
Sbjct: 499 SEETYAMLAKITQLLKIEG 517
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 350 bits (899), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 274/455 (60%), Gaps = 9/455 (1%)
Query: 38 NYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA 97
+ A LV + + + + N +IR + S+ P A+ L+ +L P T PSL K+
Sbjct: 157 DQAALVTSGWLRRSADLHNALIRALAGSARPHLALPLYAHLLRAGH-HPTPHTLPSLLKS 215
Query: 98 YAQLGLARDGAQ-----LHGRVVKQGLEFDQFIHNTIIYMYANC-GFLSEARLMFDEVDT 151
A L A GA+ +H VK GL + N +I ++A G LS+A L+
Sbjct: 216 LA-LSPAVPGARGLALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDA-LVLLRTAA 273
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
D +N++I A+ G + ++R LFD+M +RN VSW++M++GYV+ +EAL LF
Sbjct: 274 SVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFAR 333
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ ++P + +V +L ACA+LG + QG+W+H +L N + + TA++DMY KCG
Sbjct: 334 MQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGE 393
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ A++VF + +K + W +M+ GLAM+G +EA++LFS ++ +KPD I+FI L A
Sbjct: 394 MQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCA 453
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H+G V++ ++ F M Y IKP I+HY CMVD L R GLL EA +++ MP PDA+
Sbjct: 454 CTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDAL 513
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IWG+L++ CR H N+E+A+ K IEL+ ++S YVL+ N+YAAS + A E R LM+
Sbjct: 514 IWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMR 573
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
E ++K PGCS +E+ G +H+F+ G HP E+
Sbjct: 574 EKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEI 608
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G++ A VF +K+ N+ W T+I+G + A+ LF M ++P + +
Sbjct: 392 GEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLG-VKPDDIAFIGA 450
Query: 95 FKAYAQLGLARDGAQLHGRVVKQ-GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
A GL G +L +V++ G++ + ++ + A G L+EAR M +++ +
Sbjct: 451 LCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKP 510
Query: 154 DVVAWNSMIIG 164
D + W +++ G
Sbjct: 511 DALIWGALMAG 521
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 290/495 (58%), Gaps = 35/495 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT--SPAGDINYAYLVFTQIKKPNLFIWNTI 58
+++LK++ A IKT L D ++ + FC+ + +A+ +F QI +P++ ++NT+
Sbjct: 33 LRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTM 92
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG++++ TP A LF +L S + P T+PSL KA A +G QLH +K G
Sbjct: 93 ARGYARTDTPLRAFTLFTQILF-SGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLG 151
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L + ++ T+I MY C E+D +RR+F
Sbjct: 152 LSENVYVCPTLINMYT--------------------------------ACNEMDCARRVF 179
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
DK+ V++N+MI+GY R + EAL LFRE+Q +N+KP++ TM+S+L++CA LGA+
Sbjct: 180 DKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALD 239
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+W+H ++ N F V TA+IDMY KCG + A+ VF + + W++M+ A
Sbjct: 240 LGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYA 299
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G+ +A+ LF ++ + +PD I+F+ +L AC+H+G V + +YF M + Y + P I
Sbjct: 300 IHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGI 359
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
KHY CMVD LGRAG LEEA + I +P P I+W +LLSAC HGN+E+ K+ +QI E
Sbjct: 360 KHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFE 419
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD + Y+++SNL A + ++E+ R LM E + K PGCS +EV+ VHEF +G
Sbjct: 420 LDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDG 479
Query: 479 LHPKAPEVYLLLNDL 493
+H + +++ L++L
Sbjct: 480 VHSVSTKLHQALDEL 494
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 350 bits (899), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 183/491 (37%), Positives = 287/491 (58%), Gaps = 38/491 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCT-SP-AGDINYAYLVFTQIKKPNLFIWNTIIRG 61
L + HAHLI +GLA P +R+LA SP A D+ +A +F P+ F++NTII
Sbjct: 27 LHQAHAHLIVSGLASHPFTVTRLLACAALSPSASDLPHAKTIFLHTHNPSPFMFNTIIMA 86
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
SS +++ ++ ML P T+P L K+ + + G QLH VVK GL+
Sbjct: 87 ---SSRTLDSVTFYVCMLHAGHF-PDNFTFPFLIKSSSASPTSLLGHQLHAHVVKFGLDR 142
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+ N +I +Y++ L AR +FDE + DVV+W ++I G + G+IDE+R++FD M
Sbjct: 143 DVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTLITGFSNSGQIDEARKIFDLM 202
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN------------------------- 216
+NTVSWN+MISGY + + EA +LF EM +++
Sbjct: 203 PLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWSAMVSGYSQLGMCNEALDLFM 262
Query: 217 -------IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
+ P+E +VS ++ACA+L A+ +G W+H+++ +N + T ++DMY KC
Sbjct: 263 EMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKEKKLRINVTLGTVLLDMYGKC 322
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G A VFN + ++ ++ WNSM+ GLA+NG EA+ LF +Q P+ I+FIA+L
Sbjct: 323 GSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEALALFWKMQFVGPSPNAITFIALL 382
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
T C+HSG + + + F++MT+ Y IKP +KHY CMVD LGRAGL++EA + MP P
Sbjct: 383 TGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDLLGRAGLVKEALDFVEKMPMKPH 442
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
+ +WG+L+ ACR HG +E+ ++ K++I+L+ + Y L+ N++AA+ ++++ R L
Sbjct: 443 SELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRYALLCNIFAAAQRWDDVAMVRDL 502
Query: 450 MKEVKIEKEPG 460
K K+ K PG
Sbjct: 503 EKGRKVLKNPG 513
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 172/465 (36%), Positives = 283/465 (60%), Gaps = 3/465 (0%)
Query: 38 NYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA 97
N L + K N+F WN++I ++S A+ F M S ++P R T+P K+
Sbjct: 27 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLS-LKPNRSTFPCAIKS 85
Query: 98 YAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVA 157
+ L G Q H + + G E D F+ + ++ MY+ CG L +AR +FDE+ + ++V+
Sbjct: 86 CSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEI-SHRNIVS 144
Query: 158 WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQN 216
W SMI G + + + R+FD M R+ +SWNS+I+ Y +N E++E+F M ++
Sbjct: 145 WTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGE 204
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
I + T+ ++L ACA G+ R G+ IH+ ++ E N V T+IIDMYCKCG E A
Sbjct: 205 INYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMAR 264
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
+ F+ + +K + W++MV G M+G+ EA+++F + + +KP+YI+F++VL AC+H+G
Sbjct: 265 KAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAG 324
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
+ + +F M+ + ++P ++HY CMVD LGRAG L+EA LI+ M PD ++WG+L
Sbjct: 325 LLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGAL 384
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
L ACR H N+++ + +A+++ ELD YVL+SN+YA + ++E+ R+LMK +
Sbjct: 385 LGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLV 444
Query: 457 KEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
K PG SL+++ G VH F+ G R HP+ ++Y L L + +QE+G
Sbjct: 445 KPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVG 489
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 157/368 (42%), Gaps = 74/368 (20%)
Query: 19 DPIAASRILAFCTSPAG-----DINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAIL 73
D I+ I+++ + G D + A VF + + ++ WN+II ++Q+ ++
Sbjct: 135 DEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESME 194
Query: 74 LFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMY 133
+F M+ I +T ++ A A G R G +H +V+K GLE + F+ +II MY
Sbjct: 195 IFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMY 254
Query: 134 ANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMI 193
CG + AR FD + E +V +W++M+ G G
Sbjct: 255 CKCGKVEMARKAFDRM-REKNVKSWSAMVAGYGMHGHA---------------------- 291
Query: 194 SGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFE 253
KEALE+F EM +KP+ T VS+L AC+ G + +G W H F +
Sbjct: 292 ---------KEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG-W-HWFKAMS--- 337
Query: 254 LNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL 313
F+ P G+ + MV L GY EA L G+
Sbjct: 338 -----------------------HEFDVEP--GVEHYGCMVDLLGRAGYLKEAFDLIKGM 372
Query: 314 QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP-SIKHYSCMVDALGRAG 372
+ L+PD++ + A+L AC V+ + + +++ P + +Y + + AG
Sbjct: 373 K---LRPDFVVWGALLGACRMHKNVDLGE---ISARKLFELDPKNCGYYVLLSNIYADAG 426
Query: 373 LLEEAEKL 380
E+ E++
Sbjct: 427 RWEDVERM 434
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/497 (38%), Positives = 288/497 (57%), Gaps = 45/497 (9%)
Query: 6 KIHAHLIKTGLAKDPIAASR----ILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++HA ++K+ DP +R + F SPAGD+ YA+L+ + N F NT+IR
Sbjct: 11 QLHAQILKS---PDPKKQTRNLTPLFTFAALSPAGDLTYAHLILNSLSTQNSFFHNTMIR 67
Query: 61 GFSQSSTPRNAILLFIDMLV--TSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
+SQ+ P A+ LF+ ML TSP +P + TYP L K+ A+L R G QLHG + K G
Sbjct: 68 AYSQTPDPTQALHLFLSMLCQPTSP-RPDKFTYPFLLKSCARLKQPRVGKQLHGLIYKSG 126
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
LE D+++ N +I+MY++CG K G + ++F
Sbjct: 127 LESDRYVSNGLIHMYSSCG-----------------------------KSGR---AYKVF 154
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
KM R+ VSW SMI G+V + + EA+ LF EM E ++P+E T+VS+L ACA GA+
Sbjct: 155 GKMRDRDVVSWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVG 214
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G + + L V TA+IDMY KCG A +VF+ + K + W +M+ GLA
Sbjct: 215 MGRRVQGVIEERKIGLEANVRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLA 274
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G EA+ LF ++S L+PD + AVL+AC ++G ++ YF M Y IKP+I
Sbjct: 275 NHGLCEEAVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTI 334
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ--I 416
+HY CMVD L R G L+EAE+ IR MP +PD ++W +L+ A + HG+I+ ++Q K +
Sbjct: 335 QHYGCMVDLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGDIDRSEQLMKDRGL 394
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+++D ++ YVL+ N+YA++ ++ + + R LM + + K PGCS IEVDG VHEF AG
Sbjct: 395 LKMDSDDCGSYVLLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCSRIEVDGLVHEFAAG 454
Query: 477 GRLHPKAPEVYLLLNDL 493
H +A ++Y L+++
Sbjct: 455 DSGHIEAEKIYAKLDEV 471
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 172/466 (36%), Positives = 290/466 (62%), Gaps = 3/466 (0%)
Query: 9 AHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTP 68
H++K G D + + S G+++ AY VF + + +L WN++I G +
Sbjct: 182 GHVLKFGFECDIFVHNASITMLLS-CGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLA 240
Query: 69 RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNT 128
AI ++ +M ++P +T + + +Q+ G + H + + GLEF + N
Sbjct: 241 IEAIKIYKEM-EAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNA 299
Query: 129 IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS 188
++ MY CG L AR++FD + + +V+W +M++G A+ G +D +R + K+ ++ V
Sbjct: 300 LMDMYVKCGELLTARVLFDNM-AQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVP 358
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
WN++ISG V+ + KEAL LF EMQ + I+P + TMV+ L+AC++LGA+ G WIH+++
Sbjct: 359 WNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIE 418
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
+ ++ + TA++DMY KCG RALQVF +P++ W +++ GLA++G +A+
Sbjct: 419 RHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALS 478
Query: 309 LFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL 368
FS + + PD I+F+ VL+AC H G V + + YF+ M+ + + P +KHYSCMVD L
Sbjct: 479 YFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLL 538
Query: 369 GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYV 428
GRAG LEEAE+L+++MP DA + G+L ACR +GN+++ ++ A +++E+D +S YV
Sbjct: 539 GRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYV 598
Query: 429 LMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
L++++Y+ + ++EA R LM + +EK PGCSL+E++G VHEFV
Sbjct: 599 LLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFV 644
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 212/448 (47%), Gaps = 66/448 (14%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+I A ++ TGL ++ AASR++AFC S + +++Y + +IK+ N+F WN IRG+
Sbjct: 73 LKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGY 132
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+S +L+ ML+ ++P TYP L K + G + G V+K G E D
Sbjct: 133 VESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECD 192
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+HN I M +CG LS A +F++ D+V WNSMI G K
Sbjct: 193 IFVHNASITMLLSCGELSVAYDVFNKSRVR-DLVTWNSMITGCVK--------------- 236
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R + EA+++++EM+ + ++P+E TM+ ++++C+++ + G+
Sbjct: 237 ---------------RGLAI-EAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKE 280
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
H ++ + E + A++DMY KCG A +F+ + +K L W +MV G A G+
Sbjct: 281 FHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGF 340
Query: 303 EN-------------------------------EAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ EA+ LF +Q ++PD ++ + L+A
Sbjct: 341 LDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSA 400
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C+ G ++ + E +K+ + + +VD + G + A ++ +P + +
Sbjct: 401 CSQLGALDVGI-WIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQR-NCL 458
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIEL 419
W +++ HGN + A ++I +
Sbjct: 459 TWTAVICGLALHGNAQDALSYFSKMIHI 486
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/440 (40%), Positives = 274/440 (62%), Gaps = 7/440 (1%)
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
++ N++ +F+ M+ S P R T+ +FKA +G Q+ +K GLE + F+
Sbjct: 10 TSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFV 69
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
N +I MYAN G + EAR +FD + D+ +WN MI G GEI ++ +FD+M R+
Sbjct: 70 TNAMIRMYANWGLVDEARRVFD-WSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERD 128
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSW ++I+GYV+ FKEAL+LF EM + P+EFT+ S L ACA L A+ QG WIH
Sbjct: 129 VVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHV 188
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC----WNSMVFGLAMNG 301
++ + ++N ++ +++DMY KCG + A +VF+ + GL WN+M+ G AM+G
Sbjct: 189 YIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHD--EYGLKLKVWPWNAMIGGYAMHG 246
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
EAI LF ++ + P+ ++F+A+L AC+H V + + YF M +Y I+P I+HY
Sbjct: 247 KSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHY 306
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD LGR+GLL+EAE+ + +MP PDA IWG+LL ACR H +IE ++ K I ELD
Sbjct: 307 GCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDS 366
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ +VL++NLY+AS Q++EA R ++ +K PGCS IE++G H+F+ G R HP
Sbjct: 367 DHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHP 426
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
+ ++YL L+++ ++ G
Sbjct: 427 QTKQLYLFLDEMTTKLKNAG 446
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 35/264 (13%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
+G+I A +F ++ + ++ W TII G+ Q + A+ LF +ML T P P T S
Sbjct: 111 SGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGP-PPNEFTLAS 169
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLS-EARLMFDEVDTE 152
A A L G +H + K ++ ++ + +++ MYA CG + A++ DE +
Sbjct: 170 ALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLK 229
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
V WN+MI G A G K KEA++LF +M
Sbjct: 230 LKVWPWNAMIGGYAMHG-------------------------------KSKEAIDLFEQM 258
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGE-WIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
+ + + P++ T V+LLNAC+ + +G + + + E ++D+ + G
Sbjct: 259 KVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGL 318
Query: 272 PERALQ-VFNTVPKKGLSCWNSMV 294
+ A + VFN + W +++
Sbjct: 319 LKEAEETVFNMPMAPDATIWGALL 342
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/459 (38%), Positives = 274/459 (59%), Gaps = 14/459 (3%)
Query: 47 IKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD 106
+ P +WN +IRG+++S TP A+ + M V+S +P T+ SL A A+ GL ++
Sbjct: 1 MDNPTTTVWNHVIRGYARSHTPWKAVECYTHM-VSSKAEPDGFTHSSLLSACARGGLVKE 59
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G Q+H V+ +G + F+ ++I YA G + AR +FD + + VV+WNSM+ G
Sbjct: 60 GEQVHATVLVKGYCSNVFVDTSLITFYAGRGGVERARHVFDGM-PQRSVVSWNSMLAGYV 118
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
+C + D +RR+FD M RN VSW +M++G RN K ++AL LF EM+ ++ + +V+
Sbjct: 119 RCADFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVA 178
Query: 227 LLNACAKLGAIRQGEWIH-----NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
L+ACA+LG ++ G WIH F+ N + + + A+I MY CG A QVF
Sbjct: 179 ALSACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVK 238
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLF-----SGLQSSNLKPDYISFIAVLTACNHSG 336
+P+K W SM+ A G EA+ LF G++ ++PD I+FI VL AC+H+G
Sbjct: 239 MPRKSTVSWTSMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAG 298
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
V++ F M T+ I PSI+HY CMVD L RAGLL+EA LI +MP +P+ IWG+L
Sbjct: 299 FVDEGHQIFASMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGAL 358
Query: 397 LSACRKHGNIEMAKQAAKQII-ELDKNESCGY-VLMSNLYAASYQFEEAMEERLLMKEVK 454
L CR H N E+A Q +++ EL+ +++ GY VL+SN+YA ++++ + R M E+
Sbjct: 359 LGGCRIHRNSELASQVENKLVPELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIEMG 418
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
++K PG S I+++G VH F+AG H + +Y L D+
Sbjct: 419 VKKPPGRSWIQINGVVHNFIAGDMTHKHSSFIYETLRDV 457
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 42/258 (16%)
Query: 36 DINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLF 95
D + A VF + N+ W T++ G +++ R A+LLF +M + ++ ++ +
Sbjct: 122 DFDGARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMR-RACVELDQVALVAAL 180
Query: 96 KAYAQLGLARDGAQLHGRVVKQGLEFDQ-----FIHNTIIYMYANCGFLSEARLMFDEVD 150
A A+LG + G +H V ++ + + ++N +I+MYA+CG L EA +F ++
Sbjct: 181 SACAELGDLKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMP 240
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
+ V+W SMI+ AK G E+ LF M+S
Sbjct: 241 RK-STVSWTSMIMAFAKQGLGKEALDLFKTMLSDG------------------------- 274
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI-----HNFLVTNCFELNTIVVTAIIDM 265
++ ++P E T + +L AC+ G + +G I H + ++ E ++D+
Sbjct: 275 -VKVDGVRPDEITFIGVLCACSHAGFVDEGHQIFASMKHTWGISPSIEH----YGCMVDL 329
Query: 266 YCKCGCPERALQVFNTVP 283
+ G + A + T+P
Sbjct: 330 LSRAGLLDEARGLIETMP 347
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 199/533 (37%), Positives = 305/533 (57%), Gaps = 42/533 (7%)
Query: 1 MKDLKKIHAHL-IKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K LK IHA L I++ +A +++L S G +YA+ VF +I +PN ++W ++I
Sbjct: 15 LKSLKSIHARLLIESSVASSEFVINKLLRL-YSRFGATDYAHKVFDEITQPNAYLWTSLI 73
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G+ ++ A LFI M PI T S+ KA A+L + G ++G +
Sbjct: 74 HGYVENRQYDEAFSLFIQMR-REPISVLNFTISSVLKALARLTRFKGGQAVYGFAFDEMC 132
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES----- 174
E D N +I Y N + AR FD + E +VV+W SMI G K G++ E+
Sbjct: 133 EKDIVSWNMMISGYGNNDRVDIARKFFDRM-PERNVVSWTSMICGYVKAGDMAEAQVLFD 191
Query: 175 ---------------------------RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
R LFD+M +N V+W++MI GY RN + +ALE
Sbjct: 192 SMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALE 251
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE-WIHNFLVTNCFELNTIVVTAIIDMY 266
LF +EQ+IKP E ++ +++AC++LG I E IHN++ + + V T++IDMY
Sbjct: 252 LFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLS-DLRVFTSLIDMY 310
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG E+ALQ+F K L C+++M+ LA +G +AI LF +Q +N+KPD ++F+
Sbjct: 311 AKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFL 370
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
VLTACNH G V++ + YF MTE + I+PS KHY+C+VD LGR G LEEA LIR+MP
Sbjct: 371 GVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPI 430
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
P +++WG+LL+ACR H N+++A+ AA ++ +++ + S Y+L+SN+YAA+ ++ +
Sbjct: 431 APHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKV 490
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV----YLLLNDLGL 495
R ++E ++ K G S IE+ VHEFV G H + + YLL D+ L
Sbjct: 491 RAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILYLLCEDMKL 543
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/499 (37%), Positives = 288/499 (57%), Gaps = 33/499 (6%)
Query: 4 LKKIHAHLIKTGLA-KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+IHA I+ G+ ++P ++ S + +++A +F QI+ PN+F WNT+IRGF
Sbjct: 51 LKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGF 110
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++S P A+ LF M S I P T+P LFKA A+L G +H VV+ G +
Sbjct: 111 AESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSL 170
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+F+ N++++MY+ G L A ++F+ M
Sbjct: 171 RFVQNSLVHMYSVLGSLXSAY--------------------------------QVFEIMS 198
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ V+WNS+I+G+ N EAL L+REM + ++P FTMVSLL+AC +LGA+ GE
Sbjct: 199 YRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGER 258
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H ++V N A++D+Y KCG A +VF+ + ++ + W S++ GLA+NG
Sbjct: 259 VHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGL 318
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
NEA+KLF L+ LKP I+F+ VL AC+H G +++ +YF M E Y I P I+H+
Sbjct: 319 GNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHG 378
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD L RAG + +A IR+MP P+A+IW +LL AC HG++E+ + A +I L++
Sbjct: 379 CMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQR 438
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
S +VL+SNLYA+ ++ + R +M ++K PG SL+E+ V+EF+ G R HP+
Sbjct: 439 HSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQ 498
Query: 483 APEVYLLLNDLGLLIQEMG 501
+ E Y +L + L++ G
Sbjct: 499 SEETYAMLAKITQLLKIEG 517
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/499 (36%), Positives = 290/499 (58%), Gaps = 34/499 (6%)
Query: 4 LKKIHAHLIKTGLA-KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+IHA I+ G++ +P ++ S + ++YAY VFT I PN+F WNTIIRG+
Sbjct: 34 LKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGY 93
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++S P A L + M+V S ++P TYP L KA ++ R+G +H ++ G E
Sbjct: 94 AESDNPSPAFLFYRQMVV-SCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESL 152
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ N+++++YA CG+ + + ++F+ M
Sbjct: 153 VFVQNSLLHIYA--------------------------------ACGDTESAYKVFELMK 180
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ V+WNSMI+G+ N + EAL LFREM + ++P FT+VSLL+A A+LGA+ G
Sbjct: 181 ERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRR 240
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H +L+ N+ V +++D+Y KCG A +VF+ + ++ W S++ GLA+NG+
Sbjct: 241 VHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGF 300
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
EA++LF ++ L P I+F+ VL AC+H G +++ +YF M E I P I+HY
Sbjct: 301 GEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYG 360
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD L RAGL+++A + I++MP P+A+IW +LL AC HG++ + + A ++ L+
Sbjct: 361 CMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPK 420
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
S YVL+SNLYA+ ++ + R M + ++K PG SL+E+ V+EF G R HP+
Sbjct: 421 HSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQ 480
Query: 483 APEVYLLLNDLGLLIQEMG 501
+ +VY LL + L++ G
Sbjct: 481 SQDVYALLEKITELLKLEG 499
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/535 (36%), Positives = 304/535 (56%), Gaps = 38/535 (7%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRIL-AFCT-SPAGDINYAYLVFTQIKKP-NLFIWNTI 58
KDL ++H LIKT L K+ A R+L +F + G +NYA +F + P N F++ T+
Sbjct: 45 KDLIQLHTLLIKTSLIKEKYAFGRLLLSFASFDNLGSLNYAQKLFDTVDIPRNSFMYTTM 104
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
I+ ++ PR A + ML + P T+ +F A ++ +G Q H +++K
Sbjct: 105 IKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTFTYVFSACSKFNGVFEGKQAHAQMIKF 164
Query: 118 GLEF--------------------------------DQFIHNTIIYMYANCGFLSEARLM 145
EF D N +I Y G L EAR +
Sbjct: 165 PFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEARRL 224
Query: 146 FDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEA 205
FDE+ E DVV+W M++G A G + E+ LFD+M RN VSW+++I GY++ + +A
Sbjct: 225 FDEM-PERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKA 283
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
LELF+EMQ +K E + +LL+ACA+LGA+ QG W+H ++ + +++ + TA+IDM
Sbjct: 284 LELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDM 343
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y KCG + A +VF K + W+SM+ GLAM+ + +AI+LF+ + ++P I++
Sbjct: 344 YSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITY 403
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
I +L AC HSG V+ F M E K KP ++HY C+VD LGRAGLL +A +++ +MP
Sbjct: 404 INILAACTHSGLVDVGLQIFNRMVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMP 463
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
D IW +LLSAC+ H N+E+ +Q + +I+++ YVL SN+YAA +++ + +
Sbjct: 464 VKADPAIWRALLSACKLHRNVELGEQVGRILIKMEPQNDMNYVLFSNVYAAVNRWDISGK 523
Query: 446 ERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL-GLLIQE 499
R MK ++K PGCS IE++G VHEFV+ HP++ +Y LL+ L ++QE
Sbjct: 524 LRREMKVRGMQKNPGCSSIELNGAVHEFVSRDHSHPQSQVIYELLHILTNHMVQE 578
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 274/455 (60%), Gaps = 9/455 (1%)
Query: 38 NYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA 97
+ A LV + + + + N +IR + S+ P A+ L+ +L P T PSL K+
Sbjct: 157 DQAALVTSGWLRRSADLHNALIRALAGSARPHLALPLYAHLLRAGH-HPTPHTLPSLLKS 215
Query: 98 YAQLGLARDGAQ-----LHGRVVKQGLEFDQFIHNTIIYMYANC-GFLSEARLMFDEVDT 151
A L A GA+ +H VK GL + N +I ++A G LS+A L+
Sbjct: 216 LA-LSPAVPGARGLALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDA-LVLLRTAA 273
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
D +N++I A+ G + ++R LFD+M +RN VSW++M++GYV+ +EAL LF
Sbjct: 274 SVDASTFNTLITAYARAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFAR 333
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ ++P + +V +L ACA+LG + QG+W+H +L N + + TA++DMY KCG
Sbjct: 334 MQADGVRPDDTVLVGVLAACAQLGVLEQGKWVHGYLKANNIRITVFLGTALVDMYAKCGE 393
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ A++VF + +K + W +M+ GLAM+G +EA++LFS ++ +KPD I+FI L A
Sbjct: 394 MQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCA 453
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H+G V++ ++ F M Y IKP I+HY CMVD L R GLL EA +++ MP PDA+
Sbjct: 454 CTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDAL 513
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IWG+L++ CR H N+E+A+ K IEL+ ++S YVL+ N+YAAS + A E R LM+
Sbjct: 514 IWGALMAGCRFHKNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMR 573
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
E ++K PGCS +E+ G +H+F+ G HP E+
Sbjct: 574 EKGVDKTPGCSTVEIKGVIHQFIVGDLSHPFIEEI 608
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G++ A VF +K+ N+ W T+I+G + A+ LF M ++P + +
Sbjct: 392 GEMQLAMEVFKVMKEKNVLAWTTMIKGLAMHGRGSEALELFSQMERLG-VKPDDIAFIGA 450
Query: 95 FKAYAQLGLARDGAQLHGRVVKQ-GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
A GL G +L +V++ G++ + ++ + A G L+EAR M +++ +
Sbjct: 451 LCACTHTGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKP 510
Query: 154 DVVAWNSMIIG 164
D + W +++ G
Sbjct: 511 DALIWGALMAG 521
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/495 (36%), Positives = 287/495 (57%), Gaps = 9/495 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M LK+IHA+ ++ GL ++L D+ YA +F QI KP+++++N I+
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQL-----PDLPYACTLFDQIPKPSVYLYNKFIQ 55
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
FS P LL+ M + P + ++ LF A A L G LH K G
Sbjct: 56 TFSSIGHPHRCWLLYCQM-CSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFA 114
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F ++ MYA G L AR +FDE+ D+ WNS+I G A+ G ++ + LF+K
Sbjct: 115 SDMFAMTALLDMYAKLGMLRSARQLFDEMPVR-DIPTWNSLIAGYARSGHMEAALELFNK 173
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQ 239
M RN +SW ++ISGY +N K+ +ALE+F ++ E+ KP+E ++ S+L AC++LGA+
Sbjct: 174 MPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDI 233
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV-PKKGLSCWNSMVFGLA 298
G+ I + N F N V A+++++ +CG E A QVF+ + K+ L WN+M+ GLA
Sbjct: 234 GKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLA 293
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G +A++L+ + ++PD ++F+ +L AC H G V + + F M +++ P +
Sbjct: 294 VHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKL 353
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C+VD LGRAG L+EA LI++MP PD++IWG+LL AC HGN+E+ + AA+ + +
Sbjct: 354 EHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFK 413
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ YV++SN+YA + + R +MK I K G S IEV +HEF+ R
Sbjct: 414 LEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVEDR 473
Query: 479 LHPKAPEVYLLLNDL 493
H K+ E+Y LL+ +
Sbjct: 474 SHLKSGEIYALLHKI 488
>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g37380, chloroplastic; Flags: Precursor
gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 632
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/500 (38%), Positives = 294/500 (58%), Gaps = 10/500 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+IHA +++ L P L + A G I ++ +F Q P+LF++ I S
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ A LL++ +L +S I P T+ SL K+ + + G +H V+K GL D
Sbjct: 107 INGLKDQAFLLYVQLL-SSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDP 161
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
++ ++ +YA G + A+ +FD + E +V+ +MI AK G ++ +R LFD M
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRM-PERSLVSSTAMITCYAKQGNVEAARALFDSMCE 220
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ VSWN MI GY ++ +AL LF+++ E KP E T+V+ L+AC+++GA+ G W
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH F+ ++ LN V T +IDMY KCG E A+ VFN P+K + WN+M+ G AM+GY
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 303 ENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+A++LF+ +Q + L+P I+FI L AC H+G VN+ F M + Y IKP I+HY
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
C+V LGRAG L+ A + I++M D D+++W S+L +C+ HG+ + K+ A+ +I L+
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI 460
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
S YVL+SN+YA+ +E + R LMKE I KEPG S IE++ +VHEF AG R H
Sbjct: 461 KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHS 520
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
K+ E+Y +L + I+ G
Sbjct: 521 KSKEIYTMLRKISERIKSHG 540
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 63/270 (23%)
Query: 2 KDLKKIHAHLIKTGLAKDP------------------------------IAASRILAFCT 31
K K IH H++K GL DP + +S + C
Sbjct: 143 KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 202
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ G++ A +F + + ++ WN +I G++Q P +A++LF +L +P +T
Sbjct: 203 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 262
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
+ A +Q+G G +H V + + + +I MY+ CG L EA L+F++
Sbjct: 263 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 322
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ D+VAWN+MI G A + GY ++AL LF E
Sbjct: 323 K-DIVAWNAMIAGYA--------------------------MHGYS-----QDALRLFNE 350
Query: 212 MQE-QNIKPSEFTMVSLLNACAKLGAIRQG 240
MQ ++P++ T + L ACA G + +G
Sbjct: 351 MQGITGLQPTDITFIGTLQACAHAGLVNEG 380
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/500 (36%), Positives = 301/500 (60%), Gaps = 7/500 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH ++K GL +D + L + YA LVF ++ + ++ W+T+IR S+
Sbjct: 144 KEIHGFVLKKGLDRD-VFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSR 202
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ L +M ++P + S+ +A R G +H V++
Sbjct: 203 NKEFDMALELIREMNFMQ-VRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG 261
Query: 125 IHNT--IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ T ++ MYA CG L AR +F+ + T+ VV+W +MI G + ++E+R LFD
Sbjct: 262 VPTTTALLDMYAKCGHLGLARQLFNGL-TQKTVVSWTAMIAGCIRSNRLEEARALFDSTQ 320
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+R+ + W +M+S Y + +A LF +M+ ++P++ T+VSLL+ CA GA+ G+W
Sbjct: 321 NRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKW 380
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H+++ E++ I+ TA++DMY KCG A ++F + + WN+++ G AM+GY
Sbjct: 381 VHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGY 440
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
EA+ +F+ ++ +KP+ I+FI +L AC+H+G V + K F M T+ + P I+HY
Sbjct: 441 GEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYG 500
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD LGRAGLL+EA ++I+SMP P+ I+WG+L++ACR H N ++ + AA Q++E++
Sbjct: 501 CMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEP- 559
Query: 423 ESCGY-VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
E+CGY VLMSN+YAA+ ++ +A R MK V ++KEPG S+IEV+G VHEF+ G + HP
Sbjct: 560 ENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHP 619
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
+ + +L ++ + E G
Sbjct: 620 QIRRINEMLAEMRRKLNEAG 639
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 206/450 (45%), Gaps = 64/450 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ K+IHAH+IKT A +I P D Q WN +I
Sbjct: 56 LEQTKQIHAHIIKTHFHH----ALQI------PLNDFPSGLSPSAQ--------WNFVIT 97
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+++ + PRNA+ ++ L + PS+ KA Q+ + G ++HG V+K+GL+
Sbjct: 98 SYTKRNQPRNALNVYAQ-LRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLD 156
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ N ++ MY C + ARL+FD++ E DVV+W++MI L+
Sbjct: 157 RDVFVGNALMLMYGECACVEYARLVFDKM-MERDVVSWSTMIRSLS-------------- 201
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
RN +F ALEL REM ++PSE MVS++N A +R G
Sbjct: 202 -----------------RNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 244
Query: 241 EWIHNFLV--TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+ +H +++ +N + TA++DMY KCG A Q+FN + +K + W +M+ G
Sbjct: 245 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 304
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+ EA LF Q+ D + + A+L+A + ++QA + F M T ++P+
Sbjct: 305 RSNRLEEARALFDSTQNR----DVMIWTAMLSAYAQANCIDQAFNLFDQM-RTSGVRPTK 359
Query: 359 KHYSCMVDALGRAGLLEEAE---KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
++ AG L+ + I + D I+ +L+ K G+I A +
Sbjct: 360 VTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDI---NAAGRL 416
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAME 445
IE + C + + +A EEA++
Sbjct: 417 FIEAISRDICMWNAIITGFAMHGYGEEALD 446
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/530 (36%), Positives = 293/530 (55%), Gaps = 32/530 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTII 59
+K K+IHA + KTGL DP+ ++L C D ++YA +F P+ F+ NT+I
Sbjct: 15 LKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNPDTFMHNTLI 74
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R S S TP +++ FI + + P T+ KA A R G QLH + + G
Sbjct: 75 RSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGF 134
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEV-------------------DTE-------- 152
+ F+ T+I MYA CG AR +FDE+ D E
Sbjct: 135 DAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFGC 194
Query: 153 ---FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
++ +WN M+ G AK GE+ +RR+F +M R+ VSW++MI G+ N F EA F
Sbjct: 195 MPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFF 254
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
RE+ + I+ +E ++ +L+ACA+ GA G+ +H F+ F V A+ID Y KC
Sbjct: 255 RELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKC 314
Query: 270 GCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G A VF +P + + W S++ GLAM+G EAI+LF ++ S ++PD I+FI++
Sbjct: 315 GNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISL 374
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC+HSG V + F+ M Y I+P+I+HY CMVD GRA L++A + I MP P
Sbjct: 375 LYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSP 434
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
+AIIW +LL AC HGNIEMA+ ++ E+D + S +VL+SN+YA + ++++ R
Sbjct: 435 NAIIWRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRR 494
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQ 498
M E ++K PG S+IE+D ++ FVAG + + E + L ++ L ++
Sbjct: 495 TMTEHSMKKTPGWSMIEIDKVIYGFVAGEKPNEVTEEAHEKLREIMLRLR 544
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/492 (36%), Positives = 298/492 (60%), Gaps = 8/492 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+H + +K GL D ++ ++ S G I + VF ++ + ++ WN +I +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYAS-LGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ +AI +F M S ++ T S A + L G +++ VV + E
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVR 183
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I N ++ M+ CG L +AR +FD + + +V W SM+ G G IDE+R LF++ +
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDK-NVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V W +M++GYV+ +F EALELFR MQ I+P F +VSLL CA+ GA+ QG+WIH
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N ++ +V TA++DMY KCGC E AL+VF + ++ + W S+++GLAMNG
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A+ L+ +++ ++ D I+F+AVLTACNH G V + + F MTE + ++P +H SC+
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAI---IWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+D L RAGLL+EAE+LI M + D ++ SLLSA R +GN+++A++ A+++ +++
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL-- 479
++S + L++++YA++ ++E+ R MK++ I K PGCS IE+DG HEF+ G L
Sbjct: 483 SDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLS 542
Query: 480 HPKAPEVYLLLN 491
HPK E+ +L+
Sbjct: 543 HPKMDEINSMLH 554
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 192/390 (49%), Gaps = 68/390 (17%)
Query: 47 IKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD 106
++ P+L ++N +++ + + + LF + L + P T P + K+ +L +
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGE-LRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G ++HG VK GLEFD ++ N+++ MYA+ G + +FDE+ + DVV+W
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEM-PQRDVVSW-------- 115
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMV 225
N +IS YV N +F++A+ +F+ M QE N+K E T+V
Sbjct: 116 -----------------------NGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIV 152
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
S L+AC+ L + GE I+ F+VT FE++ + A++DM+CKCGC ++A VF+++ K
Sbjct: 153 STLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK 211
Query: 286 GLSCWNSMVFGLA--------------------------MNGYE-----NEAIKLFSGLQ 314
+ CW SMVFG MNGY +EA++LF +Q
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 271
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
++ ++PD +++LT C +G + Q K + E ++ + +VD + G +
Sbjct: 272 TAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN-RVTVDKVVGTALVDMYAKCGCI 330
Query: 375 EEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
E A ++ + + D W SL+ +G
Sbjct: 331 ETALEVFYEIK-ERDTASWTSLIYGLAMNG 359
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 127/261 (48%), Gaps = 13/261 (4%)
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
+N M+ F + L LF E++ Q + P FT+ +L + +L + +GE +H + V
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
E ++ V +++ MY G E +VF+ +P++ + WN ++ NG +AI
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 309 LFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
+F + Q SNLK D + ++ L+AC+ + + + + +++ S++ + +VD
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNALVDM 191
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGY 427
+ G L++A + SM D + W S++ G I+ A+ + +++
Sbjct: 192 FCKCGCLDKARAVFDSM-RDKNVKCWTSMVFGYVSTGRIDEAR------VLFERSPVKDV 244
Query: 428 VL---MSNLYAASYQFEEAME 445
VL M N Y +F+EA+E
Sbjct: 245 VLWTAMMNGYVQFNRFDEALE 265
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 303/539 (56%), Gaps = 41/539 (7%)
Query: 1 MKDLKKIHAHL-IKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K L K+H+ + I L DP A +++ S G+ + A +F + + N+ +N +I
Sbjct: 51 IKTLNKLHSKIVINEHLRIDPTLAIKLMR-AYSAQGETSVARYIFDRSLEKNVVFFNVMI 109
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R + ++ A+ +F ML + P T+P + KA + L R G Q+H +VK GL
Sbjct: 110 RSYVNNNLYVEALSIFQVML-SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL 168
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES----- 174
+ + FI N ++ MY CG L EAR + D++ DVV+WNSM+ G A+ G+ D++
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICK 227
Query: 175 --------------------------------RRLFDKMVSRNTVSWNSMISGYVRNVKF 202
+F++M +N +SWN MI+ YV N
Sbjct: 228 EMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMP 287
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAI 262
EA+ LF +M+E +KP T+ SLL AC L A+ G +H ++ + N ++ A+
Sbjct: 288 NEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENAL 347
Query: 263 IDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
+DMY KCGC E A VF+ + + + W SM+ +G +A+ LF+ + S PD
Sbjct: 348 LDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDS 407
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
I+F++VL+AC+H+G ++Q + YF +MTE Y I P I+H++CMVD GRAG +EEA I+
Sbjct: 408 IAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIK 467
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEE 442
MP +P+ +WG+LLSACR H +++ AA + +L +S YVL+SN+YA + +++
Sbjct: 468 QMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKD 527
Query: 443 AMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
M R MK++ I+K PG S +E++G+VH F+AG + HP+A +Y L+ L ++E+G
Sbjct: 528 VMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELG 586
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 184/511 (36%), Positives = 303/511 (59%), Gaps = 45/511 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDP---IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
+ LK++HA I+T + P SRIL F S D+ YA+ VF QI+ PN F+WN
Sbjct: 39 ISQLKQLHAQTIRTTSSHHPNTFFLYSRILHF--SSLHDLRYAFRVFHQIENPNSFMWNA 96
Query: 58 IIRGFSQSSTPR-NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR ++S+ + +AI L+ ML + + T+P + KA A L +G Q+H +++K
Sbjct: 97 LIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILK 156
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G + D +I+N++++ YA C +D ++
Sbjct: 157 LGFDSDVYINNSLVHFYAT--------------------------------CDRLDFAKG 184
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M R+ VSWN +I +VR +F AL LF EMQ + +P +T+ S+ NACA +G+
Sbjct: 185 VFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQ-KFFEPDGYTIQSIANACAGMGS 243
Query: 237 IRQGEWIHNFLVT--NCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ G W H FL+ + +N +++ T+++DMYCKCG E ALQ+F+ +PK+ ++ WNSM
Sbjct: 244 LSLGMWAHVFLLKKFDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSM 303
Query: 294 VFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
+ G + +G A++ F + ++ L P+ I+F+ VL+ACNH G V++ + YF +M Y
Sbjct: 304 ILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEY 363
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA-CRKHGNIEMAKQ 411
KIKP ++HY C+VD L RAGL++EA ++ +MP PD +IW SLL A C+++ +E++++
Sbjct: 364 KIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEE 423
Query: 412 AAKQIIELDKNESCG-YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
A++++E + G YVL+S +YA++ ++ + R LM + + KEPGCS IE+DG
Sbjct: 424 MARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVA 483
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
HEF AG HP+ E+Y L+ + ++ +G
Sbjct: 484 HEFFAGDTSHPQTEEIYSALDVIEERVERVG 514
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 296/496 (59%), Gaps = 4/496 (0%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H +IK L+ D + ++ F S +G + A+ VFT + ++ WN +I F+
Sbjct: 195 LHGMVIKASLSSDLFILNSLINFYGS-SGAPDLAHRVFTNMPGKDVVSWNAMINAFALGG 253
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
P A+LLF +M + ++P +T S+ A A+ G + + G ++
Sbjct: 254 LPDKALLLFQEMEMKD-VKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILN 312
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N ++ MY CG +++A+ +F+++ +E D+V+W +M+ G AK G DE+ +FD M + T
Sbjct: 313 NAMLDMYVKCGCINDAKDLFNKM-SEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWT 371
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
+WN++IS Y +N K + AL LF EMQ ++ KP E T++ L A A+LGAI G WIH
Sbjct: 372 AAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHV 431
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + LN + T+++DMY KCG +A++VF+ V +K + W++M+ LAM G
Sbjct: 432 YIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKA 491
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+ LFS + + +KP+ ++F +L ACNH+G VN+ + F M Y I P I+HY C+V
Sbjct: 492 ALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVV 551
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D GRAGLLE+A I MP P A +WG+LL AC +HGN+E+A+ A + ++EL+
Sbjct: 552 DIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHG 611
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
+VL+SN+YA + +E+ R LM++ ++KEP CS I+V+G VHEF+ G HP + +
Sbjct: 612 AFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQK 671
Query: 486 VYLLLNDLGLLIQEMG 501
+Y L+++ + +G
Sbjct: 672 IYSKLDEISEKFKPIG 687
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 217/448 (48%), Gaps = 67/448 (14%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+IHAH+++T DP AS++L A+ S + YA VF QI +PNL+ WNT+IRG+
Sbjct: 88 LKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGY 147
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ SS P + L+F+ ML + P + T+P LFKA ++L + G+ LHG V+K L D
Sbjct: 148 ASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSD 207
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
FI N++I Y + G A +F + + DVV+WN+MI A G D
Sbjct: 208 LFILNSLINFYGSSGAPDLAHRVFTNMPGK-DVVSWNAMINAFALGGLPD---------- 256
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+AL LF+EM+ +++KP+ TMVS+L+ACAK + G W
Sbjct: 257 ---------------------KALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRW 295
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN---------------------- 280
I +++ N F + I+ A++DMY KCGC A +FN
Sbjct: 296 ICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGN 355
Query: 281 ---------TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYISFIAVLT 330
+P K + WN+++ NG A+ LF +Q S + KPD ++ I L
Sbjct: 356 YDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALC 415
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
A G ++ + + + + I + + ++D + G L +A ++ ++ D
Sbjct: 416 ASAQLGAIDFGH-WIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERK-DV 473
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+W +++ A +G + A ++E
Sbjct: 474 YVWSAMIGALAMYGQGKAALDLFSSMLE 501
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 185/503 (36%), Positives = 294/503 (58%), Gaps = 35/503 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTS--PAGDINYAYLVFTQIKKPNLFIWNTI 58
+K+LK+I A IKT L D ++++ CT ++YA+ +F I +P++ ++N++
Sbjct: 39 LKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNSM 98
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG+S+S+ P AI LFI L + + P T+PSL KA + G QLH +K G
Sbjct: 99 FRGYSRSNAPLKAISLFIKALNYN-LLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLG 157
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L + ++ T+I MYA C ++D ++R+F
Sbjct: 158 LNENPYVCPTLINMYAGCN--------------------------------DVDGAQRVF 185
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D+++ VS+N++I+GY R+ + EAL LFR++Q + +KP++ T++S+L++CA LGA+
Sbjct: 186 DEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALD 245
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+WIH ++ N + V TA+IDMY KCG + A+ VF ++ + W++M+ A
Sbjct: 246 LGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYA 305
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
M+G + + +F + + ++PD I+F+ +L AC+H+G V++ YF M+E Y I P I
Sbjct: 306 MHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGI 365
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
KHY CMVD LGRAGLL EA K I +P P I+W +LLS+C HGN+E+AKQ QI+E
Sbjct: 366 KHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILE 425
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD + YV++SNL A + ++E+ R LM K PGCS IEVD VHEF +G
Sbjct: 426 LDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDG 485
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
+H + ++ L++L ++ +G
Sbjct: 486 VHYVSTALHRALDELVKELKSVG 508
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 180/471 (38%), Positives = 286/471 (60%), Gaps = 9/471 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+IHAH + T L + ++L F SP+GD+ YA +F Q+ +PN F +NTII
Sbjct: 29 MNHLKQIHAHSLLTDLHNHSVILGKMLRFAAVSPSGDLPYAQRLFDQMPQPNTFFYNTII 88
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA------QLHGR 113
RG+++SS+P + LF + + + + P T+ L KA +++ + ++HG
Sbjct: 89 RGYAKSSSPSYCVNLF-NQMRQNHVDPDEFTFNFLIKARSRVHKVHNFPSTLECDEIHGA 147
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
V K G F+ N +I +YA G + A +F+E DVV+W+ +++ + GE++
Sbjct: 148 VFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNET-VGVDVVSWSGLVLAHVRGGELEL 206
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R++FD M ++ VSW +M+SGY + +EALELF EM + I+P E T+VS+++AC
Sbjct: 207 ARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVISACTN 266
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LG + G +H+++ N F + A+I+MY KCGC +RA +VFN + +K L WNSM
Sbjct: 267 LGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVDRAWRVFNNMKRKSLITWNSM 326
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ A +GY +A +LFS + +S + PD I+F+A+L A H G V++ F +M Y
Sbjct: 327 ISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERDYG 386
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
I+ SI+HY C+VD LGRAG LEEA +LI +MP + I+WG+LL+ACR +G++ M ++
Sbjct: 387 IEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVWGALLAACRIYGDVNMGERVV 446
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
K+++EL +E Y+L+ ++Y AS + EA R M+E K PG S +
Sbjct: 447 KKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQESGAMKNPGYSWV 497
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 348 bits (893), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/556 (35%), Positives = 305/556 (54%), Gaps = 72/556 (12%)
Query: 4 LKKIHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFI--WNTIIR 60
L ++HA LIK+G L P +L + + YA +F +P L +N ++R
Sbjct: 32 LPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMR 91
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ P +A+ LF++ML + + P + T K+ +++ G + VK+GL
Sbjct: 92 ALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLM 151
Query: 121 FDQF-----IH--------------------------NTIIYMYANCGFLSEARLMFD-- 147
D+F IH N II Y G E MF
Sbjct: 152 ADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGM 211
Query: 148 -EVDTEFDVVAWNSMII---------------------GL--------------AKCGEI 171
EV FD + S++ GL AKCGE+
Sbjct: 212 LEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGEL 271
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
++RRLFD M SR+ V+W++MISGY + + +EAL LF EMQ ++P++ TMVS+L+AC
Sbjct: 272 GKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSAC 331
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A LGA+ G+W+H+++ L I+ TA++D Y KCGC + A++ F ++P K W
Sbjct: 332 AVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWT 391
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+++ G+A NG EA++LFS ++ ++++P ++FI VL AC+HS V + + +F MT+
Sbjct: 392 ALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQD 451
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
Y IKP +HY C+VD LGRAGL++EA + IR+MP +P+A+IW +LLS+C H N+E+ ++
Sbjct: 452 YGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEE 511
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
A KQI+ L+ + S Y+L+SN+YA+ Q++ A R MK+ IEK PGCSLIE+DG V
Sbjct: 512 ALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVVV 571
Query: 472 EFVAGGRLHPKAPEVY 487
EF A HP+ E+Y
Sbjct: 572 EFFAEDSDHPQLKEIY 587
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 188/539 (34%), Positives = 302/539 (56%), Gaps = 41/539 (7%)
Query: 1 MKDLKKIHAHL-IKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K L K+H+ + I L DP A +++ S G+ + A +F + + N+ +N +I
Sbjct: 51 IKTLNKLHSKIVINEHLRIDPTLAIKLMR-AYSAQGETSVARYIFDRSLEKNVVFFNVMI 109
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R + ++ A+ +F ML + P T+P + KA + L R G Q+H +VK GL
Sbjct: 110 RSYVNNNLYVEALSIFQVML-SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGL 168
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES----- 174
+ + FI N ++ MY CG L EAR + D++ DVV+WNSM+ G A+ G+ D++
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICK 227
Query: 175 --------------------------------RRLFDKMVSRNTVSWNSMISGYVRNVKF 202
+F++M +N +SWN MI+ YV N
Sbjct: 228 EMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMP 287
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAI 262
EA+ LF +M+E +KP T+ SLL AC L A+ G +H ++ N ++ A+
Sbjct: 288 NEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENAL 347
Query: 263 IDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
+DMY KCGC E A VF+ + + + W SM+ +G +A+ LF+ + S PD
Sbjct: 348 LDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDS 407
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
I+F++VL+AC+H+G ++Q + YF +MTE Y I P I+H++CMVD GRAG +EEA I+
Sbjct: 408 IAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIK 467
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEE 442
MP +P+ +WG+LLSACR H +++ AA + +L +S YVL+SN+YA + +++
Sbjct: 468 QMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKD 527
Query: 443 AMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
M R MK++ I+K PG S +E++G+VH F+AG + HP+A +Y L+ L ++E+G
Sbjct: 528 VMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELG 586
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 195/570 (34%), Positives = 313/570 (54%), Gaps = 77/570 (13%)
Query: 1 MKDLKKIHAHLIKTG-LAKDP-----IAASRILAFCTSPAGDINYAYLVFTQIKKP--NL 52
++D+ ++HA L+K+G + P + + L + + ++YA +F P +
Sbjct: 76 LRDVPQLHATLLKSGAMTTSPDSFHSLLEAAALPAPATSSAHLSYAIRLFRLGPHPPRSA 135
Query: 53 FIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHG 112
+N +IR F ++ P +A+ LF++ML + + P + T + K+ +++ G +
Sbjct: 136 RSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQA 195
Query: 113 RVVKQGLEFDQF-----IH--------------------------NTIIYMYANCGFLSE 141
K+G DQF IH N +I Y G E
Sbjct: 196 YAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKE 255
Query: 142 ARLMFD---EVDTEFDVVA------------------W-----------------NSMII 163
MF EV FD V W +++
Sbjct: 256 VVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVD 315
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFT 223
AKCGE+D++RRLFD+M SR+ V+W++MISGY ++ + +EAL +F EMQ + P++ T
Sbjct: 316 MYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVT 375
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
MVS+L+ACA LGA+ G+W+H+++ L I+ TA++D Y KCGC + A++ F ++P
Sbjct: 376 MVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMP 435
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
+ W +++ G+A NG EA++LFS + +N++P ++FI VL AC+H V + +
Sbjct: 436 VRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVEEGRR 495
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
+FT MT+ Y I P I+HY CMVD LGRAGL++EA + IR+MP +P+A++W +LLSAC H
Sbjct: 496 HFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVH 555
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
N+E+ ++A KQI+ LD S Y+L+SN YA+ Q++ A R MKE +EK PGCSL
Sbjct: 556 KNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIPGCSL 615
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
IE++G + EF A HP+ E+Y ++++
Sbjct: 616 IELEGTIFEFFAEDSEHPQLTEIYEKVHEM 645
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 180/503 (35%), Positives = 297/503 (59%), Gaps = 23/503 (4%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++HA ++ TGL+ S +L TS YA+ +F I P LF++NT+I
Sbjct: 18 LNTLKQVHAQMLTTGLSFQTYYLSHLLN--TSSKFASTYAFTIFNHIPNPTLFLYNTLIS 75
Query: 61 GFSQSSTPRN-AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QG 118
+ S + A L+ +L +QP T+PSLFKA A + G LH V+K
Sbjct: 76 SLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQ 135
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+D F+ N+++ YA G L +R +FD++ +E D+ WN+M+ A+
Sbjct: 136 PPYDPFVQNSLLNFYAKYGKLCVSRYLFDQI-SEPDLATWNTMLAAYAQ----------- 183
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
S + VS+++ ++ EAL LF +MQ IKP+E T+V+L++AC+ LGA+
Sbjct: 184 ----SASHVSYSTSFEDADMSL---EALHLFCDMQLSQIKPNEVTLVALISACSNLGALS 236
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
QG W H +++ N +LN V TA++DMY KCGC A Q+F+ + + C+N+M+ G A
Sbjct: 237 QGAWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFA 296
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G+ N+A++L+ ++ +L PD + + + AC+H G V + + F M + ++P +
Sbjct: 297 VHGHGNQALELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKL 356
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C++D LGRAG L+EAE+ ++ MP P+AI+W SLL A + HGN+EM + A K +IE
Sbjct: 357 EHYGCLIDLLGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIE 416
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ S YVL+SN+YA+ ++ + R+LMK+ ++K PG SL+E++G +HEF+ G +
Sbjct: 417 LEPETSGNYVLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSLVEINGAMHEFLTGDK 476
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
HP + E+Y + ++ + E G
Sbjct: 477 AHPFSKEIYSKIGEINRRLLEYG 499
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 183/500 (36%), Positives = 284/500 (56%), Gaps = 36/500 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKK--PNLFIWNTIIRGF 62
++IH+ +K G+ D + +++ S G + A VF + ++ WN++I G+
Sbjct: 147 REIHSSTLKLGVHLDVFVQNALIS-AFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGY 205
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
QS A+ +F ++L + P +T S +LGL G ++HG G D
Sbjct: 206 LQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLD 265
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ +++I MY+ KCG+I+++R++FD++
Sbjct: 266 VFVGSSLIDMYS--------------------------------KCGQIEDARKVFDRIP 293
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
RNTV W SMI+GY ++ FKEA+ELFREMQ T+ +L+AC GA+ QG W
Sbjct: 294 HRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRW 353
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH + N E++ A+I MY KCG ++AL++F+ + + + W++++ GLAMNG
Sbjct: 354 IHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGE 413
Query: 303 ENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
++A+ LFS ++ S+++P+ I+F+ VL ACNH G V++ YF MT+ Y + P I+HY
Sbjct: 414 SDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHY 473
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD LGRA LL EAEK IR++P PD +IW SLL ACR HGNIE+A+ AAKQI EL+
Sbjct: 474 GCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEP 533
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
VL+SN+YA++ ++ + R M +I+K+PGCS +E+DG VHE R HP
Sbjct: 534 RRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVHELFVADRSHP 593
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
+ +Y + + +Q G
Sbjct: 594 EMGAIYETMISINKALQSKG 613
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 216/417 (51%), Gaps = 36/417 (8%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+ +I +H I +G+ +DP+ +S++L + S D ++ +F QI KPN+F WN + R
Sbjct: 42 RSFNQILSHAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRA 101
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+S+SS P I L+ ++++ + P ++P + KA A+L L G ++H +K G+
Sbjct: 102 YSRSSFPAETIALY-NLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHL 160
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEF-DVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ N +I +++CG + AR +FD + DVV+WNS
Sbjct: 161 DVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNS-------------------- 200
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFRE-MQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
MISGY+++ +++ AL++F E + + ++ P E T+VS L+ C +LG +
Sbjct: 201 -----------MISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDL 249
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ IH + F L+ V +++IDMY KCG E A +VF+ +P + CW SM+ G A
Sbjct: 250 GKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQ 309
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+ EAI+LF +Q D + VL+AC H G + Q + + L E I+ +
Sbjct: 310 SDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGR-WIHLYCERNSIEMDLN 368
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ ++ + G +++A ++ + + PD W +++S +G + A Q+
Sbjct: 369 ARNALIGMYSKCGDIQKALEIFHGL-TQPDIFSWSAVISGLAMNGESDKALHLFSQM 424
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 348 bits (892), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 281/475 (59%), Gaps = 10/475 (2%)
Query: 35 GDINYAYLVFTQIK----KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLT 90
G ++ A +F+++ +PNL WN +I GF+ S A+L+F+DM + +P T
Sbjct: 194 GCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRG-FEPDGTT 252
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
S+ A L G +HG V+KQGL D+ + + +I MY C SE +FD++D
Sbjct: 253 ISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMD 312
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLF----DKMVSRNTVSWNSMISGYVRNVKFKEAL 206
DV + N+ I GL++ G+++ S RLF D+ + N VSW SMI+ +N + EAL
Sbjct: 313 -HMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEAL 371
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
ELFREMQ +KP+ T+ LL AC + A+ G+ H F + + V +A+IDMY
Sbjct: 372 ELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY 431
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG + + F+ +P K L CWN+++ G AM+G EA+++F +Q S KPD ISF
Sbjct: 432 AKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFT 491
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
VL+AC+ SG + YF M+ Y I+ ++HY+CMV L RAG LE+A +IR MP
Sbjct: 492 CVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPV 551
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
+PDA +WG+LLS+CR H N+ + + AA+++ EL+ + Y+L+SN+YA+ + E
Sbjct: 552 NPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRV 611
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R +MK + K PGCS IEV +VH +AG + HP+ ++ L+ L + ++++G
Sbjct: 612 RDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLG 666
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 238/463 (51%), Gaps = 22/463 (4%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYA--YLVFTQIKKPNLFIWNTI 58
+ ++ HAH++KTGL D A+++L + A ++ +A LV + +PN+F ++T+
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHLATKLL---SHYANNMCFADATLVLDLVPEPNVFSFSTL 85
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
I FS+ +A+ F ML T + P PS KA A L + Q+HG G
Sbjct: 86 IYAFSKFHQFHHALSTFSQML-TRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSG 144
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ D F+ +++++MY C + +A +FD + E DVV+W++++ A+ G +DE++RLF
Sbjct: 145 FDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 179 DKM----VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
+M V N +SWN MI+G+ + + EA+ +F +M + +P T+ S+L A L
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
+ G IH +++ + V +A+IDMY KC C QVF+ + + N+ +
Sbjct: 264 EDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFI 323
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
FGL+ NG +++LF L+ ++ + +S+ +++ C+ +G+ +A + F M + +
Sbjct: 324 FGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREM-QIAGV 382
Query: 355 KPSIKHYSCMVDALGRAGLLEEAE-----KLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
KP+ C++ A G L + L R + + D + +L+ K G I+ +
Sbjct: 383 KPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGIST--DVYVGSALIDMYAKCGRIQAS 440
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
+ I KN C +++ YA + +EAME LM+
Sbjct: 441 RICFDGIPT--KNLVCWNAVIAG-YAMHGKAKEAMEIFDLMQR 480
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 182/475 (38%), Positives = 281/475 (59%), Gaps = 10/475 (2%)
Query: 35 GDINYAYLVFTQIK----KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLT 90
G ++ A +F+++ +PNL WN +I GF+ S A+L+F+DM + +P T
Sbjct: 194 GCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRG-FEPDGTT 252
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
S+ A L G +HG V+KQGL D+ + + +I MY C SE +FD++D
Sbjct: 253 ISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMD 312
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLF----DKMVSRNTVSWNSMISGYVRNVKFKEAL 206
DV + N+ I GL++ G+++ S RLF D+ + N VSW SMI+ +N + EAL
Sbjct: 313 -HMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEAL 371
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
ELFREMQ +KP+ T+ LL AC + A+ G+ H F + + V +A+IDMY
Sbjct: 372 ELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY 431
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG + + F+ +P K L CWN+++ G AM+G EA+++F +Q S KPD ISF
Sbjct: 432 AKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFT 491
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
VL+AC+ SG + YF M+ Y I+ ++HY+CMV L RAG LE+A +IR MP
Sbjct: 492 CVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPV 551
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
+PDA +WG+LLS+CR H N+ + + AA+++ EL+ + Y+L+SN+YA+ + E
Sbjct: 552 NPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRV 611
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R +MK + K PGCS IEV +VH +AG + HP+ ++ L+ L + ++++G
Sbjct: 612 RDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLG 666
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 238/463 (51%), Gaps = 22/463 (4%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYA--YLVFTQIKKPNLFIWNTI 58
+ ++ HAH++KTGL D A+++L + A ++ +A LV + +PN+F ++T+
Sbjct: 29 LSQTRQAHAHILKTGLFNDTHLATKLL---SHYANNMCFADATLVLDLVPEPNVFSFSTL 85
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
I FS+ +A+ F ML T + P PS KA A L + Q+HG G
Sbjct: 86 IYAFSKFHQFHHALSTFSQML-TRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSG 144
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ D F+ +++++MY C + +A +FD + E DVV+W++++ A+ G +DE++RLF
Sbjct: 145 FDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAAYARQGCVDEAKRLF 203
Query: 179 DKM----VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
+M V N +SWN MI+G+ + + EA+ +F +M + +P T+ S+L A L
Sbjct: 204 SEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDL 263
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
+ G IH +++ + V +A+IDMY KC C QVF+ + + N+ +
Sbjct: 264 EDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFI 323
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
FGL+ NG +++LF L+ ++ + +S+ +++ C+ +G+ +A + F M + +
Sbjct: 324 FGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREM-QIAGV 382
Query: 355 KPSIKHYSCMVDALGRAGLLEEAE-----KLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
KP+ C++ A G L + L R + + D + +L+ K G I+ +
Sbjct: 383 KPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGIST--DVYVGSALIDMYAKCGRIQAS 440
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
+ I KN C +++ YA + +EAME LM+
Sbjct: 441 RICFDGIPT--KNLVCWNAVIAG-YAMHGKAKEAMEIFDLMQR 480
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 182/495 (36%), Positives = 291/495 (58%), Gaps = 36/495 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTS--PAGDINYAYLVFTQIKKPNLFIWNTI 58
+++LK+I A+ IKT +P ++++ FCTS +++A+ +F +I +P++ ++NT+
Sbjct: 48 LRELKQIQAYTIKTH-QNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNTM 106
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG+++ P AILL +L S + P T+ SL KA A+L +G QLH VK G
Sbjct: 107 ARGYARFDDPLRAILLCSQVLC-SGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLG 165
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ + ++ T+I MY C ++D +RR+F
Sbjct: 166 VGDNMYVCPTLINMYT--------------------------------ACNDVDAARRVF 193
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
DK+ V++N++I+ RN + EAL LFRE+QE +KP++ TM+ L++CA LGA+
Sbjct: 194 DKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALD 253
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G WIH ++ N F+ V TA+IDMY KCG + A+ VF +P++ W++M+ A
Sbjct: 254 LGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYA 313
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G+ ++AI + ++ + ++PD I+F+ +L AC+H+G V + +YF MT Y I PSI
Sbjct: 314 THGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSI 373
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
KHY CM+D LGRAG LEEA K I +P P I+W +LLS+C HGN+EMAK ++I E
Sbjct: 374 KHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFE 433
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD + YV++SNL A + ++++ R +M + K PGCS IEV+ VHEF +G
Sbjct: 434 LDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDG 493
Query: 479 LHPKAPEVYLLLNDL 493
+H + ++ L++L
Sbjct: 494 VHSTSTILHHALDEL 508
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 270/450 (60%), Gaps = 42/450 (9%)
Query: 53 FIWNTIIRGF----SQSSTPRNA-ILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG 107
F+WNT+IR +Q + P ++ I +F+ M +QP T+P L +++A L G
Sbjct: 25 FLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHG-VQPDFHTFPFLLQSFASPSLLHLG 83
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
+H ++++ GL D F+ ++I MY++ G
Sbjct: 84 RSVHAQILRFGLAIDPFVQTSLISMYSSSGL----------------------------- 114
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE---QNIKPSEFTM 224
+D +R LF M RN +SW+ MI+GYVR ++KEAL LFREMQ +++P+EFTM
Sbjct: 115 ---VDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTM 171
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF-NTVP 283
+L AC +LGA+ G+W H ++ ++ ++ TA+IDMY KCG E+A VF N P
Sbjct: 172 SGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGP 231
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
K + W++M+ GLAM+G E + LFS + + ++P+ ++F+AV AC H G V++ KD
Sbjct: 232 NKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKD 291
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
Y MTE Y I P+I+HY CMVD GRAG ++EA +++SMP +PD ++WG+LLS R H
Sbjct: 292 YLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMH 351
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
G+IE + A K++IEL+ S YVL+SN+YA ++E+ R LM+ + I+K PGCSL
Sbjct: 352 GDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSL 411
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
IEV G +HEF G HP+ +++++L ++
Sbjct: 412 IEVGGVLHEFFVGDDSHPETRQIHMMLEEI 441
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 140/301 (46%), Gaps = 36/301 (11%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +HA +++ GLA DP + +++ +S +G ++ A +F + + N+ W+ +I G+ +
Sbjct: 84 RSVHAQILRFGLAIDPFVQTSLISMYSS-SGLVDMARNLFAVMPERNVISWSCMINGYVR 142
Query: 65 SSTPRNAILLF--IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ A+ LF + ML + ++P T + A +LG G H + K G+ D
Sbjct: 143 CGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVD 202
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ +I MYA CG + +A +F + DV+AW++MI GLA G +E LF KM+
Sbjct: 203 VVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMI 262
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+ Q ++P+ T +++ AC G + +G+
Sbjct: 263 N-------------------------------QGVRPNAVTFLAVFCACVHGGLVSEGKD 291
Query: 243 IHNFLVTNCFELNTIV-VTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMN 300
+ + + TI ++D+Y + G + A V ++P + + W +++ G M+
Sbjct: 292 YLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMH 351
Query: 301 G 301
G
Sbjct: 352 G 352
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 9/220 (4%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPN--LFIWNTIIRGF 62
K HA++ K G+ D + + ++ + G + A VF+ + PN + W+ +I G
Sbjct: 188 KWAHAYIDKCGMPVDVVLGTALIDM-YAKCGSVEKATWVFSNLG-PNKDVMAWSAMISGL 245
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ + LF M + ++P +T+ ++F A GL +G R+ +
Sbjct: 246 AMHGLAEECVGLFSKM-INQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIP 304
Query: 123 QFIH-NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
H ++ +Y G + EA + + E DV+ W +++ G G+I+ K+
Sbjct: 305 TIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKL 364
Query: 182 VS---RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
+ N+ ++ + + Y + ++++ + M+ IK
Sbjct: 365 IELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIK 404
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 184/501 (36%), Positives = 290/501 (57%), Gaps = 12/501 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAF----CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
++HA +++TGL A R +AF + +G ++ + + + + P + + I
Sbjct: 307 ELHAAVLRTGLLD---ATDRAVAFRLQRAYAASGRLDLSLALLRRTRDPTAIFYTSAIHA 363
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
S A+ L DML + P T + A L R LHG K L
Sbjct: 364 HSSRGHRLPALALLSDMLAQG-LLPTAHTLSASLPACRGLSPGR---ALHGYAFKLALAG 419
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D ++ ++ MYA G + AR +FD++ + VV+ +M+ A G +D++R LFD +
Sbjct: 420 DSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDARSLFDGL 479
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+++ V WN+MI GY ++ + EAL LFR M ++P E T+V +L+A A+LG + G+
Sbjct: 480 PTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQLGTVESGK 539
Query: 242 WIHNFLV-TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
W+H+++ + +L+ V TA+IDMYCKCG A+ VF+ + K + WN+M+ G AM+
Sbjct: 540 WLHSYVKNSRRVQLSVRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNAMINGYAMH 599
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G +A+++F + L P I+FI +L AC+HSG V + +++F M Y I P I+H
Sbjct: 600 GDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREYGIDPKIEH 659
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGRAGL++EA L++SM PDA++W SLL+ACR H N+ + +Q A ++
Sbjct: 660 YGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQIADYLVAKG 719
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
S Y+L+SN+YAA + E R +MK I+KEPGCS IE+D EV+EFVAG H
Sbjct: 720 LANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCSSIEIDREVYEFVAGDMSH 779
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ E+Y++L+ + L++E G
Sbjct: 780 PRTDEIYVMLDKMNGLVKEHG 800
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 302/507 (59%), Gaps = 12/507 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD----INYAYLVFTQIKKPNLFIWN 56
++ LK+IHAHL+KT L++ P A + +L + D +YA +F +++ N+F++N
Sbjct: 20 VQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQRNIFMYN 79
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL--GLARDGAQLHGRV 114
++IRG+ S P+ AIL ++D L+ + T+P L KA A + L R G +H V
Sbjct: 80 SMIRGYFLSRFPKQAILCYLD-LMDRGFLANKYTFPPLIKACALVYRELKRIGYLVHAHV 138
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
+ G E D F+ + ++ Y+ L AR++FD+ + DVV W M+ G K G+I+ +
Sbjct: 139 IVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKSSGK-DVVVWTVMVDGYGKVGDIESA 196
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R LFD+M RN +SW++M++ Y R F+E L LFR+MQ++NI P++ + S+L ACA L
Sbjct: 197 RVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIASVLTACAHL 256
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GAI QG W+H++ + N I+ TA++DMY KCG E AL+VF + K WN+M+
Sbjct: 257 GAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAWNAMI 316
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G AM G ++++LF + +S + +F+++L AC H+ V + ++F M Y++
Sbjct: 317 SGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQMYPVYRV 376
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMP---SDPDAIIWGSLLSACRKHGNIEMAKQ 411
+P +HY+C+VD + RAG++E+AEK + S+ DA +WG++LSACR++ NIE+ +
Sbjct: 377 QPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYRNIEIGDR 436
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
++ L + VL N+++ + + A E R E + +K PGCS+I VDG V
Sbjct: 437 IWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKKIPGCSVIVVDGAVQ 496
Query: 472 EFVAGGRLHPKAPEVYLLLNDLGLLIQ 498
EF+AG HP+ + +L L +++
Sbjct: 497 EFLAGDLSHPQVQHICEMLGFLSKMVK 523
>gi|147810325|emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
Length = 805
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/448 (39%), Positives = 268/448 (59%), Gaps = 7/448 (1%)
Query: 51 NLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD--GA 108
N+F++N++IRG+ S +P AIL ++DML + T+P L KA LG + G
Sbjct: 348 NIFMYNSMIRGYVLSHSPTRAILCYLDML-NYGLLANNYTFPPLIKACTTLGSSSKLIGC 406
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
+H VV G + D F+ + +I Y+ + AR +FD + DVV W +MI G K
Sbjct: 407 LVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNR-DVVLWTAMIDGYGKM 465
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G+++ +R LF+ M RN +SW+++++ Y R FKE L LFR MQE P+E +VS+L
Sbjct: 466 GDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESVLVSVL 525
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
ACA LGA+ QG W+H++ F+ N I+ TA++DMY KCGC E AL F +P K
Sbjct: 526 TACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAG 585
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN+M+ G+AMNG ++++LF+ + S+ +P +F+AVLTAC H+ V + F M
Sbjct: 586 AWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVREGLKLFEQM 645
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGN 405
+ Y ++P +HY+C+VD + RAG+L EAEK I DA +WG+ L ACR +GN
Sbjct: 646 SSNYGVEPQXEHYACLVDLMARAGMLAEAEKFIEEKMGGLGRGDANVWGAXLGACRTYGN 705
Query: 406 IEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 465
IE+ + K++ ++ + +VL NLY + EA R L+ E ++K+PGCS+IE
Sbjct: 706 IEVGNRVWKKLADMGVADCGTHVLSYNLYREAGWDMEAKRVRRLISEXGMKKKPGCSIIE 765
Query: 466 VDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
VDG V EF+AG H +AP++ L+ L
Sbjct: 766 VDGTVEEFLAGDLSHSQAPQICKTLDSL 793
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+HAH++ G +DP S ++ F S D+ A +F +I ++ +W +I G+ +
Sbjct: 408 VHAHVVTFGFDEDPFVVSALIEF-YSLNFDMGTARTLFDRIPNRDVVLWTAMIDGYGKMG 466
Query: 67 TPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+A +LF DM P+R +++ ++ AY+++G ++ L R+ + G ++
Sbjct: 467 DVEHARILFEDM-------PERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNES 519
Query: 125 IHNTIIYMYANCGFLSEARLMFD---EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ +++ A+ G L++ + + + + + + +++ +KCG ++ + F +
Sbjct: 520 VLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGI 579
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+++ +WN+MISG N ++LELF +M +P+E T V++L AC +R+G
Sbjct: 580 PNKDAGAWNAMISGVAMNGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVREG 638
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 42/330 (12%)
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
++ R+ QG ++ ++ +L++ ++ E D V + S +GL +
Sbjct: 278 VYKRITIQGFLAADLMNGYTDFISTTQDYLNDGKIQVIE-DISQGVESIPSAFVGLFRGD 336
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
+ + L RN +NSMI GYV + A+ + +M + + +T L+
Sbjct: 337 NVGKKINL----SLRNIFMYNSMIRGYVLSHSPTRAILCYLDMLNYGLLANNYTFPPLIK 392
Query: 230 ACAKLGAIRQ--GEWIHNFLVTNCFELNTIVV---------------------------- 259
AC LG+ + G +H +VT F+ + VV
Sbjct: 393 ACTTLGSSSKLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDV 452
Query: 260 ---TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
TA+ID Y K G E A +F +P++ W++++ + G E + LF +Q +
Sbjct: 453 VLWTAMIDGYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEA 512
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE-TYKIKPSIKHYSCMVDALGRAGLLE 375
P+ ++VLTAC H G + Q + + + P + + +VD + G +E
Sbjct: 513 GTMPNESVLVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILA--TALVDMYSKCGCVE 570
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
A + +P + DA W +++S +G+
Sbjct: 571 SALSTFQGIP-NKDAGAWNAMISGVAMNGD 599
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/495 (37%), Positives = 289/495 (58%), Gaps = 16/495 (3%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
I+A +I+ +DP +L C S I YA +F+ + PN++++ +I G S
Sbjct: 51 IYAKIIRNHHHQDPFVVFELLRVC-SNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSC 109
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
+ I L+ M + S + P S+ KA ++G ++H +V+K GL ++ I
Sbjct: 110 YYTDGIHLYYQM-INSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIR 168
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+I +Y CG +AR +FDE+ E DVVA MI FD + ++T
Sbjct: 169 IKLIELYGKCGAFEDARRVFDEM-PERDVVASTVMI------------NYYFDHGI-KDT 214
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
V W +MI G VRN + ALE+FR MQ +++ P+E T+V +L+AC++LGA++ G W+ ++
Sbjct: 215 VCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSY 274
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ + ELN V A+I+MY +CG + A +VF + +K + +NSM+ G A++G EA
Sbjct: 275 MDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEA 334
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
++LF GL P ++F+ VL AC+H G + F M + Y I+P I+HY CMVD
Sbjct: 335 VELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVD 394
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR G LEEA IR M PD ++ G+LLSAC+ HGN+E+A++ AK ++ +S
Sbjct: 395 LLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGT 454
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
Y+L+SN Y++S +++EA E R M+E IEKEPGCS IEV+ E+HEF+ G HP+ ++
Sbjct: 455 YILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIEVNNEIHEFLLGDLRHPQKEKI 514
Query: 487 YLLLNDLGLLIQEMG 501
Y L +L +++ G
Sbjct: 515 YKKLEELNQILRLEG 529
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/511 (36%), Positives = 288/511 (56%), Gaps = 44/511 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++HAH+I TGL SRIL ++ +A +F I P +F++NT+I
Sbjct: 22 LDTLKQVHAHMITTGLIFHTYPLSRILLISSTIV--FTHALSIFNHIPNPTIFLYNTLIS 79
Query: 61 GFSQSSTPRN-AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ + A L+ +L + ++P T+PSLFKA R G LH V+K
Sbjct: 80 SLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVLK--- 136
Query: 120 EFDQFIHNTIIYMYANCG-FLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
++ C F+ A L + AKCG++ R LF
Sbjct: 137 -----------FLEPTCDPFVQAALLNY------------------YAKCGKVGACRYLF 167
Query: 179 DKMVSRNTVSWNSMISGYVRN-------VKFK-EALELFREMQEQNIKPSEFTMVSLLNA 230
+++ + SWNS++S YV N V E L LF EMQ+ IK +E T+V+L++A
Sbjct: 168 NQISKPDLASWNSILSAYVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISA 227
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA+LGA+ QG W H +++ + +LN V TA+IDMY KCGC + A Q+F+ +P + C+
Sbjct: 228 CAELGALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCY 287
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N+M+ G A++GY ++A+ LF + L PD ++ + + +C+H G V + D F M E
Sbjct: 288 NAMIGGFAIHGYGHQALDLFKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKE 347
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
Y ++P ++HY C+VD LGRAG L EAE+ + +MP P+A+IW SLL A R HGN+E+ +
Sbjct: 348 VYGVEPKLEHYGCLVDLLGRAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGE 407
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
K +I+L+ S YVL+SN+YA+ ++++ R LMK+ I K PG SL+EV G +
Sbjct: 408 VVLKHLIQLEPETSGNYVLLSNMYASINRWDDVKRVRKLMKDHGINKVPGSSLVEVGGAM 467
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
HEF+ G + HP++ E+YL L ++ + E G
Sbjct: 468 HEFLMGDKTHPRSKEIYLKLEEMSRRLHEYG 498
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/501 (37%), Positives = 292/501 (58%), Gaps = 5/501 (0%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K ++ IH H IKT ++DP A +L +C I++A +F + PN++++ ++I
Sbjct: 41 KHVQSIHCHAIKTRTSQDPFVAFELLRVYC--KVNYIDHAIKLFRCTQNPNVYLYTSLID 98
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GF + +AI LF M V + ++ KA G ++HG V+K GL
Sbjct: 99 GFVSFGSYTDAINLFCQM-VRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLG 157
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D+ I ++ +Y CG L +AR MFD + E DVVA MI CG ++E+ +F++
Sbjct: 158 LDRSIALKLVELYGKCGVLEDARKMFDGM-PERDVVACTVMIGSCFDCGMVEEAIEVFNE 216
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +R+TV W +I G VRN +F LE+FREMQ + ++P+E T V +L+ACA+LGA+ G
Sbjct: 217 MGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELG 276
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
WIH ++ E+N V A+I+MY +CG + A +F+ V K +S +NSM+ GLA++
Sbjct: 277 RWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIGGLALH 336
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA++LFS + ++P+ I+F+ VL AC+H G V+ + F M + I+P ++H
Sbjct: 337 GKSIEAVELFSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEH 396
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGR G LEEA I M + D + SLLSAC+ H NI M ++ AK + E
Sbjct: 397 YGCMVDILGRVGRLEEAFDFIGRMGVEADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHY 456
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ +S ++++SN YA+ ++ A E R M++ I KEPGCS IEV+ +HEF +G H
Sbjct: 457 RIDSGSFIMLSNFYASLGRWSYAAEVREKMEKGGIIKEPGCSSIEVNNAIHEFFSGDLRH 516
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ +Y L +L L + G
Sbjct: 517 PERKRIYKKLEELNYLTKFEG 537
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 303/495 (61%), Gaps = 8/495 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTS-PAGDIN-YAYLVFTQIKKPNLFIWNTIIRGF 62
K++HA + L + +++L T+ P ++ Y L+F+Q+ PN F W +IR +
Sbjct: 25 KEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFAWTALIRAY 84
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR-VVKQGLEF 121
+ P + L F + + P T+ +LF A A + + GAQLH + ++ G
Sbjct: 85 ALRG-PLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSS 143
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D +++N +I MY CG L AR++FDE+ E DV++W +I+ + G++ +R LFD +
Sbjct: 144 DLYVNNAVIDMYVKCGSLRCARMVFDEM-PERDVISWTGLIVAYTRIGDMRAARDLFDGL 202
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ V+W +M++GY +N +ALE+FR ++++ ++ E T+V +++ACA+LGA +
Sbjct: 203 PVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYAN 262
Query: 242 WIHNFLVTNCFEL--NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
WI + ++ F + N +V +A+IDMY KCG E A VF + ++ + ++SM+ G A+
Sbjct: 263 WIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAI 322
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G AIKLF + + +KP++++F+ VLTAC+H+G V+Q + F M + Y + P+ +
Sbjct: 323 HGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAE 382
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
Y+CM D L RAG LE+A +L+ +MP + D +WG+LL A HGN ++A+ A+K++ EL
Sbjct: 383 LYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFEL 442
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV-DGEVHEFVAGGR 478
+ + Y+L+SN YA++ ++++ + R L++E ++K PG S +E +G +H+FVAG
Sbjct: 443 EPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVAGDV 502
Query: 479 LHPKAPEVYLLLNDL 493
HPK E+ LNDL
Sbjct: 503 SHPKINEIKKELNDL 517
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/511 (36%), Positives = 295/511 (57%), Gaps = 13/511 (2%)
Query: 1 MKDLK---KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
+KDLK +IH + K+ + D S ++ F S G + A VF +++ N+ WN
Sbjct: 169 LKDLKLGAQIHGLISKSKYSLDVFMGSGLIDF-YSKCGLVGCARRVFDGMEEKNVVSWNC 227
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+I + Q+ A+ F M +P +T S+ A A L ++G Q+H RVVK
Sbjct: 228 LITCYEQNGPAIEALEAFGRM-TELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKS 286
Query: 118 G-LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
D + N ++ MYA CG ++EAR +FD + + V+ +M+ G AK + +R
Sbjct: 287 DKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR-NAVSETTMVSGYAKSASVKAARS 345
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F + ++ VSWN++I+GY +N + +EAL LFR ++ +++ P+ +T +LLNA A L
Sbjct: 346 MFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLAD 405
Query: 237 IRQGEWIHNFLVTNCF------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
+ G H+ +V + F E + V ++IDMY KCG E L+VF + +K W
Sbjct: 406 LELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSW 465
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N+M+ G A NGY EA++LF + S KPD+++ I L AC+H+G V + + YF MT+
Sbjct: 466 NTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTK 525
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
+ + P HY+CMVD LGRAG LEEA+ LI SMP PDA++W SLLSAC+ H NI + K
Sbjct: 526 EHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGK 585
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
A++I E+D S YVL++N+Y+ ++ +A+ R LM+ + K+PGCS I++ V
Sbjct: 586 YVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWIDIQSNV 645
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
H F+ + HP+ E+Y +L L +++ G
Sbjct: 646 HVFMVKDKRHPQKKEIYSILKLLTKHMRQAG 676
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 173/330 (52%), Gaps = 2/330 (0%)
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
+ L +L +RD +HGR+++ + FI N +I +Y CG+L AR +FD +
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRM- 85
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
+E +V ++NS+I L + G +DES LF M ++ SWNSMI+G+ ++ +F+EAL+ F
Sbjct: 86 SERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFV 145
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
M + ++++ S L+AC++L ++ G IH + + + L+ + + +ID Y KCG
Sbjct: 146 RMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCG 205
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
A +VF+ + +K + WN ++ NG EA++ F + KPD ++ +V++
Sbjct: 206 LVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVS 265
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC + + ++ K + + + +VD + G + EA + MP +A
Sbjct: 266 ACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPV-RNA 324
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ +++S K +++ A+ I + D
Sbjct: 325 VSETTMVSGYAKSASVKAARSMFATIKQKD 354
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 201/471 (42%), Gaps = 103/471 (21%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFI------- 54
+D + +H LI+T ++ +R++ G ++YA VF ++ + N+F
Sbjct: 41 RDARSVHGRLIQTPFCEEVFIQNRLIDV-YGKCGYLDYARKVFDRMSERNVFSFNSIIST 99
Query: 55 ------------------------WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLT 90
WN++I GF+Q A+ F+ M + +
Sbjct: 100 LMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLND-YS 158
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
+ S A ++L + GAQ+HG + K D F+ + +I Y+ CG + AR +FD ++
Sbjct: 159 FGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGME 218
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
E +VV+W N +I+ Y +N EALE F
Sbjct: 219 -EKNVVSW-------------------------------NCLITCYEQNGPAIEALEAFG 246
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV-TNCFELNTIVVTAIIDMYCKC 269
M E KP E T+ S+++ACA L A ++G IH +V ++ F + I+ A++DMY KC
Sbjct: 247 RMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKC 306
Query: 270 G-----------CPER--------------------ALQVFNTVPKKGLSCWNSMVFGLA 298
G P R A +F T+ +K + WN+++ G
Sbjct: 307 GRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYT 366
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT-LMTETYKIK-- 355
NG EA+ LF L+ ++ P + +F +L A + + + + ++ ++ +
Sbjct: 367 QNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSG 426
Query: 356 --PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
P I + ++D + G +EE ++ +M + D + W +++ ++G
Sbjct: 427 EEPDIFVGNSLIDMYMKCGSVEEGLRVFENM-VEKDHVSWNTMIIGYAQNG 476
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 302/555 (54%), Gaps = 63/555 (11%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K+ +IH LI +GL + P+AA R + S + +A +F +++P+ FI NTI+R
Sbjct: 73 KEFNQIHTQLIVSGLLQQPLAAGRAVKTLCSFPDSVQHAVSLFEGLEEPDAFICNTIMRT 132
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ + P A+ + + +V + P T+P L K ++G DG ++H R++K G E
Sbjct: 133 YVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFEL 192
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFD------------------------------EVDT 151
D F+ N++I+MY+ CG + +AR MF+ E
Sbjct: 193 DLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMP 252
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
E D+ +WNSMI G G++ + LF+KM R+ VSWN MI GY + + A ELF
Sbjct: 253 ERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNW 312
Query: 212 MQEQNI------------------------------KPSEFTMVSLLNACAKLGAIRQGE 241
M +N+ P+E T+VS+L ACA LG + +G+
Sbjct: 313 MPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGK 372
Query: 242 WIHNFLVTN-CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
WIH+++ N E + ++ TA++ MY KCG + A VF+ + + + WNSM+ G M+
Sbjct: 373 WIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMH 432
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G ++A+++F ++ P+ +FI VL+AC HSG + + YF LM YKI+P ++H
Sbjct: 433 GQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEH 492
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGRAGL+++ E+LIR MP + +WG+LLSACR H N E+A+ AK++IEL+
Sbjct: 493 YGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELE 552
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG-EVHEFVAGGRL 479
+ Y+L+SN+YAA ++++ R +MKE + K G S + ++ FV +
Sbjct: 553 PRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWVHIEEFGTQSFVEKASV 612
Query: 480 HPKAPEVYLLLNDLG 494
H K+ +Y +L+D+
Sbjct: 613 HRKS-MMYSILSDMA 626
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 187/518 (36%), Positives = 296/518 (57%), Gaps = 51/518 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAA---SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
M LK++HA ++T ++P +IL +S D+NYA+ VF I+ + F+WNT
Sbjct: 38 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQL-SSSFSDVNYAFRVFDSIENHSSFMWNT 96
Query: 58 IIRGFSQS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR + S A +L+ ML P + T+P + KA A + +G Q+H ++VK
Sbjct: 97 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 156
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G D +++N +I++Y +C G +D +R+
Sbjct: 157 HGFGGDVYVNNGLIHLYGSC--------------------------------GCLDLARK 184
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M R+ VSWNSMI VR ++ AL+LFREMQ ++ +P +TM S+L+ACA LG+
Sbjct: 185 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGS 243
Query: 237 IRQGEWIHNFLVTNC---FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ G W H FL+ C ++ +V ++I+MYCKCG A QVF + K+ L+ WN+M
Sbjct: 244 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 303
Query: 294 VFGLAMNGYENEAIKLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+ G A +G EA+ F + + N++P+ ++F+ +L ACNH G VN+ + YF +M
Sbjct: 304 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 363
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAK 410
Y I+P+++HY C+VD + RAG + EA ++ SMP PDA+IW SLL AC K G ++E+++
Sbjct: 364 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 423
Query: 411 QAAKQIIEL-DKNESC------GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
+ A+ II + NES YVL+S +YA++ ++ + R LM E I KEPGCS
Sbjct: 424 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 483
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
IE++G HEF AG HP+ ++Y L + ++ +G
Sbjct: 484 IEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIG 521
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 186/518 (35%), Positives = 295/518 (56%), Gaps = 51/518 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAA---SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
M LK++HA ++T ++P +IL +S D+NYA+ VF I+ + F+WNT
Sbjct: 118 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQL-SSSFSDVNYAFRVFDSIENHSSFMWNT 176
Query: 58 IIRGFSQS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR + S A +L+ ML P + T+P + KA A + +G Q+H ++VK
Sbjct: 177 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 236
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G D +++N +I++Y +C G +D +R+
Sbjct: 237 HGFGGDVYVNNGLIHLYGSC--------------------------------GCLDLARK 264
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M R+ VSWNSMI VR ++ AL+LFREMQ ++ +P +TM S+L+ACA LG+
Sbjct: 265 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGS 323
Query: 237 IRQGEWIHNFLVTNC---FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ G W H FL+ C ++ +V ++I+MYCKCG A QVF + K+ L+ WN+M
Sbjct: 324 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 383
Query: 294 VFGLAMNGYENEAIKLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+ G A +G EA+ F + + N++P+ ++F+ +L ACNH G VN+ + YF +M
Sbjct: 384 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 443
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAK 410
Y I+P+++HY C+VD + RAG + EA ++ SMP PDA+IW SLL AC K G ++E+++
Sbjct: 444 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 503
Query: 411 QAAKQII-------ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
+ A+ II + N S YVL+S +YA++ ++ + R LM E I KEPGCS
Sbjct: 504 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 563
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
IE++G HEF AG HP+ ++Y L + ++ +G
Sbjct: 564 IEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIG 601
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 295/498 (59%), Gaps = 4/498 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IHAHLI+ + K+ I + L S G +NYA +F ++ + N + WN++I G+ Q
Sbjct: 499 RQIHAHLIRANITKNIIVETE-LVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQ 557
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ + A+ LF M + I+P + S+ + L ++ G +LH +V+ +E +
Sbjct: 558 NGETQEALRLFKQMQLNG-IKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 616
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA CG + A ++D+ + DV+ N M+ G ++++ LFD+M R
Sbjct: 617 LQVVLVDMYAKCGSMDYAWKVYDQT-IKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQR 675
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
NT WNS+++GY KE+ F EM E +I+ TMV+++N C+ L A+ G+ +H
Sbjct: 676 NTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLH 735
Query: 245 NFLVTNCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
+ ++ F ++V+ TA++DMY KCG +A VF+ + K + WN+M+ G + +G
Sbjct: 736 SLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCS 795
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ L+ + + P+ ++F+A+L+AC+H+G V + FT M E Y I+ +HY+C
Sbjct: 796 KEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTC 855
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG LE+A++ + MP +P+ WG+LL ACR H +++M + AA+++ ELD
Sbjct: 856 MVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQN 915
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
YV+MSN+YAA+ +++E + R +MK ++K+PG S IE++ E+ F AG + HPK
Sbjct: 916 PGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKT 975
Query: 484 PEVYLLLNDLGLLIQEMG 501
E+Y L L L + +G
Sbjct: 976 EEIYNNLRHLTLQSKGLG 993
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 190/413 (46%), Gaps = 37/413 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H+ LI G D + ++ + D VF ++ + N WN+II +Q
Sbjct: 296 KQVHSKLIACGFKGDTFVGNALIDM-YAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQ 354
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+A++LF+ M S + R S+ A A L G +LHG +V+ L D
Sbjct: 355 FGHFNDALVLFLRM-QESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDII 413
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ + ++ MY+ KCG ++E+ ++F ++ R
Sbjct: 414 LGSALVDMYS--------------------------------KCGMVEEAHQVFRSLLER 441
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N VS+N++++GYV+ K +EALEL+ +MQ E I+P +FT +LL CA QG I
Sbjct: 442 NEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQI 501
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H L+ N IV T ++ MY +CG A ++FN + ++ WNSM+ G NG
Sbjct: 502 HAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGET 561
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA++LF +Q + +KPD S ++L++C + ++ + + I
Sbjct: 562 QEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQV-V 620
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+VD + G ++ A K + D I+ ++SA G AK Q+
Sbjct: 621 LVDMYAKCGSMDYAWK-VYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQM 672
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 196/417 (47%), Gaps = 37/417 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M ++++ + ++K GL + ++ + G ++ A +I+ ++ WN +I
Sbjct: 191 MGGVRQLQSSVVKAGLNCNLFVGGALVD-GYARFGWMDDAVTSLDEIEGTSVVTWNAVIA 249
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ + + A +F D ++ + P T+ S + L G Q+H +++ G +
Sbjct: 250 GYVKILSWEEAWGIF-DRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFK 308
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ N +I MYA KC + + ++FD+
Sbjct: 309 GDTFVGNALIDMYA--------------------------------KCDDEESCLKVFDE 336
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M RN V+WNS+IS + F +AL LF MQE K + F + S+L A A L I +G
Sbjct: 337 MGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKG 396
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H LV N + I+ +A++DMY KCG E A QVF ++ ++ +N+++ G
Sbjct: 397 RELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQE 456
Query: 301 GYENEAIKLFSGLQSSN-LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
G EA++L+ +QS + ++PD +F +LT C + NQ + + I +I
Sbjct: 457 GKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA-NITKNII 515
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ +V G L A+++ M ++ +A W S++ +++G + A + KQ+
Sbjct: 516 VETELVHMYSECGRLNYAKEIFNRM-AERNAYSWNSMIEGYQQNGETQEALRLFKQM 571
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 134/332 (40%), Gaps = 41/332 (12%)
Query: 82 SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSE 141
S + P L Y SL + + G +H +++ G D ++ I+ +YA G L +
Sbjct: 67 SDVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDD 124
Query: 142 ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVK 201
+ +R+LF++M RN +WN+MI Y R
Sbjct: 125 -----------------------------LCYARKLFEEMPERNLTAWNTMILAYARVDD 155
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNAC---AKLGAIRQGEWIHNFLVTNCFELNTIV 258
+ E L L+ M+ +FT S++ AC +G +RQ + + +V N V
Sbjct: 156 YMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQ---LQSSVVKAGLNCNLFV 212
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
A++D Y + G + A+ + + + WN+++ G EA +F + +
Sbjct: 213 GGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGV 272
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFT-LMTETYKIKPSIKHYSCMVDALGRAGLLEEA 377
PD +F + L C + K + L+ +K + + ++D + E
Sbjct: 273 CPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVG--NALIDMYAKCDDEESC 330
Query: 378 EKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
K+ M + + + W S++SA + G+ A
Sbjct: 331 LKVFDEM-GERNQVTWNSIISAEAQFGHFNDA 361
>gi|297810935|ref|XP_002873351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319188|gb|EFH49610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1281
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 180/478 (37%), Positives = 288/478 (60%), Gaps = 6/478 (1%)
Query: 20 PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDML 79
P++ R D+NYAY + +++ P + WN +IRGFS S P +I ++I +L
Sbjct: 787 PVSVDRNYLLAVDATSDVNYAYKLLSKLSNPPDYGWNFVIRGFSNSKNPEKSIRVYIQIL 846
Query: 80 VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFL 139
S P +TYP L K+ ++L G LH VVK GLE+D FI NT+I+MY +
Sbjct: 847 -RSGFSPDHMTYPFLLKSSSRLSNREIGGSLHCSVVKTGLEWDLFISNTLIHMYGSFRDK 905
Query: 140 SEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRN 199
+ AR +FDE+ + ++V WNS++ AK G++ +R +FD+M R+ V+W+SMI GYV++
Sbjct: 906 ASARKLFDEMPYK-NLVTWNSILDSYAKSGDVVSARLVFDEMTMRDVVTWSSMIDGYVKS 964
Query: 200 VKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
++ EALE+F +M + K +E TMVS+L ACA LG + +G+ +H +++ L I+
Sbjct: 965 GEYNEALEIFDQMMRMGSSKANEVTMVSVLCACAHLGELNRGKVVHRYILDVHLPLTVIL 1024
Query: 259 VTAIIDMYCKCGCPERALQVF--NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
T++IDMY KCG A VF +V K WN+M+ GLA +G+ E++ LF ++ S
Sbjct: 1025 QTSLIDMYAKCGSIGDAWGVFCGASVKKTDALMWNAMIGGLASHGFIRESLLLFHKMRES 1084
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE 376
+ PD I+F+ +L AC+H G V +A +FT + E+ +P +HY+CMVD L RAGL+++
Sbjct: 1085 EIDPDEITFLCLLAACSHGGLVKEAWHFFTSLKES-GAEPKSEHYACMVDVLSRAGLVKD 1143
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAA 436
A I M P + G+L + C HGN+E+A+ K++IEL + YV ++N+YA
Sbjct: 1144 AHDFISEMLIKPTGSVLGALFNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAI 1203
Query: 437 SYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLG 494
+ QF A R M++ ++K G S+I+++G H F+A + H + ++Y +L +G
Sbjct: 1204 NKQFGAARSMREAMEKKGVKKIAGHSIIKLNGTSHRFIAHDQTHFHSDKIYAVLQLIG 1261
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/394 (18%), Positives = 168/394 (42%), Gaps = 37/394 (9%)
Query: 48 KKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG 107
K P++ + ++I G S P AI + +M P R+T+ +L + G + +
Sbjct: 680 KNPDVITYTSLIHGLCASRRPSEAISRWNEM-KGKDCYPNRITFMALIQGLCNCGWSSEA 738
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV--DTEFDVVAWNSMIIGL 165
+ ++ +E D ++ +++ + + +S +F E+ F V + ++ +
Sbjct: 739 LVYFREMEEKEMEPDSAVYLSLVSSFLSSENISAGFGIFREMVHKGRFPVSVDRNYLLAV 798
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 225
+++ + +L K+ + WN +I G+ + ++++ ++ ++ P T
Sbjct: 799 DATSDVNYAYKLLSKLSNPPDYGWNFVIRGFSNSKNPEKSIRVYIQILRSGFSPDHMTYP 858
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
LL + ++L G +H +V E + + +I MY A ++F+ +P K
Sbjct: 859 FLLKSSSRLSNREIGGSLHCSVVKTGLEWDLFISNTLIHMYGSFRDKASARKLFDEMPYK 918
Query: 286 GLSCWN-------------------------------SMVFGLAMNGYENEAIKLFSG-L 313
L WN SM+ G +G NEA+++F +
Sbjct: 919 NLVTWNSILDSYAKSGDVVSARLVFDEMTMRDVVTWSSMIDGYVKSGEYNEALEIFDQMM 978
Query: 314 QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGL 373
+ + K + ++ ++VL AC H G++N+ K + + + + ++ + ++D + G
Sbjct: 979 RMGSSKANEVTMVSVLCACAHLGELNRGKVVHRYILDVH-LPLTVILQTSLIDMYAKCGS 1037
Query: 374 LEEAEKLI-RSMPSDPDAIIWGSLLSACRKHGNI 406
+ +A + + DA++W +++ HG I
Sbjct: 1038 IGDAWGVFCGASVKKTDALMWNAMIGGLASHGFI 1071
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 174/412 (42%), Gaps = 29/412 (7%)
Query: 26 ILAFCTSPAGDINYAYLVFTQIKK----PNLFIWNTIIRGFSQSSTPRNAILLFIDMLVT 81
I+ C A +N A + I + P+L ++N II G + ++ L +M
Sbjct: 444 IVIDCLVKANKVNMAVTLLHDIVQNGLIPSLMMYNNIIEGMCKEGRSEESLKLLAEM-KD 502
Query: 82 SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANC--GFL 139
+ ++P + T ++ A+ L ++ G F+ +I +T + C G
Sbjct: 503 AGVEPSQYTLNCIYGCLAERCDFAGALDLLKKMRFYG--FEPWIKHTTCLVKKLCENGKA 560
Query: 140 SEARLMFDEVDTE---FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR----NTVSWNSM 192
+A D+V E +V++ + I GL + +D LF + + ++++ +
Sbjct: 561 VDACKYIDDVAGEGFLRHMVSYTAAIEGLIRNEGVDRGLELFRDTCANGHCPDVIAYHVL 620
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
I + + EA LF EM + +KPS T S+++ K G I +G + +
Sbjct: 621 IKALCKACRTTEADNLFNEMVSKGLKPSVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEK 680
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW-NSMVF-----GLAMNGYENEA 306
+ I T++I C P A+ +N + KG C+ N + F GL G+ +EA
Sbjct: 681 NPDVITYTSLIHGLCASRRPSEAISRWNEM--KGKDCYPNRITFMALIQGLCNCGWSSEA 738
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI-KHYSCMV 365
+ F ++ ++PD +++++++ S ++ F M + S+ ++Y V
Sbjct: 739 LVYFREMEEKEMEPDSAVYLSLVSSFLSSENISAGFGIFREMVHKGRFPVSVDRNYLLAV 798
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
DA A KL+ + + PD W ++ N E + + QI+
Sbjct: 799 DATSDVNY---AYKLLSKLSNPPD-YGWNFVIRGFSNSKNPEKSIRVYIQIL 846
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 203 KEALELFREMQEQNI-KPSEFTMVSLLNACAKLGAIRQGEWIHNFL--VTNC-FELNTIV 258
+EA +F ++E + P+ +T LL A +K + E + L + +C F +
Sbjct: 158 EEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNS-SSVELVEARLKEMRDCGFHFDKFT 216
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCW------NSMVFGLAMNGYENEAIKLFSG 312
+T ++ +YC G ERAL VFN + +G W +V G ++A +L
Sbjct: 217 LTPVLQVYCNNGKSERALSVFNEILSRG---WLDEHISTILVVSFCKWGQVDKAFELIEM 273
Query: 313 LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAG 372
L+ +++ +Y +F ++ ++++A F M + P I Y ++ L +
Sbjct: 274 LEERHIRLNYKTFCVLIHGFVKESRIDKAFQLFEKMRRM-GMNPDIALYDVLIGGLCKHK 332
Query: 373 LLEEAEKL---IRSMPSDPDAIIWGSLLSA 399
LE A L I+ PD I G LL +
Sbjct: 333 DLEMALSLYLEIKRSGIPPDRGILGKLLCS 362
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 79/422 (18%), Positives = 164/422 (38%), Gaps = 77/422 (18%)
Query: 30 CTSPAGDINYAYLVFTQIKK-----PNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPI 84
C AG + A VF ++++ PN + +N ++ S+S++
Sbjct: 150 CLGNAGLVEEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSS---------------- 193
Query: 85 QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL 144
S+ A+L RD G FD+F ++ +Y N G A
Sbjct: 194 --------SVELVEARLKEMRDC----------GFHFDKFTLTPVLQVYCNNGKSERALS 235
Query: 145 MFDEVDTE--FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR----NTVSWNSMISGYVR 198
+F+E+ + D +++ K G++D++ L + + R N ++ +I G+V+
Sbjct: 236 VFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERHIRLNYKTFCVLIHGFVK 295
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
+ +A +LF +M+ + P L+ K + ++ + + + +
Sbjct: 296 ESRIDKAFQLFEKMRRMGMNPDIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGI 355
Query: 259 VTAIIDMYCKCGCPERALQVF--NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL--- 313
+ ++ + + R +V + K + + S++ G N +EA L
Sbjct: 356 LGKLLCSFSEESELSRITKVIIGDIDTKSVMLLYKSLLEGFIRNDLVHEAYNFIQNLMGN 415
Query: 314 ---------------QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK--IKP 356
Q+ + PD S V+ + KVN A TL+ + + + P
Sbjct: 416 HESDGMSEIVKLLKDQNKAILPDSDSLSIVIDCLVKANKVNMA---VTLLHDIVQNGLIP 472
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPS---DPDA----IIWGSLLSACRKHGNIEMA 409
S+ Y+ +++ + + G EE+ KL+ M +P I+G L C G +++
Sbjct: 473 SLMMYNNIIEGMCKEGRSEESLKLLAEMKDAGVEPSQYTLNCIYGCLAERCDFAGALDLL 532
Query: 410 KQ 411
K+
Sbjct: 533 KK 534
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 291/487 (59%), Gaps = 27/487 (5%)
Query: 2 KDLKKIHAHLIKTGL-AKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+++K++HA + +GL P+ A R+L A+ T I YA+ +F +I P++F++NT+I
Sbjct: 27 QEVKQLHAQFVVSGLLGYHPLCARRLLEAYVT--MSQIYYAFSIFERIPSPDVFVYNTMI 84
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG + + TY + KA + L +G Q+H +++K G+
Sbjct: 85 RGLTMDN----------------------FTYTFVLKACSHLKAPFEGKQVHCQIIKAGI 122
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D IH+++I+MY N G + +A + E E + +A N+MI G G +D++R++FD
Sbjct: 123 VPDTHIHSSLIHMYTNSGSIDDAERVLGEFSEE-NTLAKNAMISGYLTEGRVDKARKMFD 181
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M +++ SW+++I+GY +N EAL LF++M +I P+E +VSLL+AC +LG + Q
Sbjct: 182 DMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEAALVSLLSACGQLGTLHQ 241
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G WIH ++ ++T + TA+IDMY K G E +F + ++ + W M+ A+
Sbjct: 242 GRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQKMARRDVVTWGVMISAFAI 301
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G+ ++ +LF + + ++P+ + F+A+L+AC+H+G V + + YF+ M + IKPSI+
Sbjct: 302 HGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGCVEEGRQYFSQMEHGFGIKPSIE 361
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAGLL +AE+LI SMP P++IIWGSLL ACR H +++ A + ++EL
Sbjct: 362 HYGCMVDLLGRAGLLADAEQLILSMPKQPNSIIWGSLLGACRTHNDLKRGTWAFENLMEL 421
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ + L ++A + + EEA + R ++ E ++ G S IEV+G VHEF G +
Sbjct: 422 EPTSGDRHKLAGLMFANAGEKEEAAKIRKMIHEKEMVTTCGSSFIEVEGAVHEFTVGYTV 481
Query: 480 HPKAPEV 486
H KA ++
Sbjct: 482 HNKARDI 488
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 172/450 (38%), Positives = 278/450 (61%), Gaps = 3/450 (0%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+LK++HAHL+KT + SR+ + C + +YA L+F + + WNT +R F
Sbjct: 30 ELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSS-FSYAKLIFQLLDASEVTHWNTCLRSF 88
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++ +P +AI LF L I P T + KA ++L R+G +HG V K GL+ +
Sbjct: 89 AEGDSPADAISLFYR-LREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSN 147
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ N I+++YA CG + AR +FD++ + DV+ WN MI L K G+ + + +LF +M
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKM-PQRDVITWNIMIARLVKMGDAEGAYKLFAEMP 206
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
RN SW SMI GY + K KEA++LF EM++ + P+E T+V++L ACA +G + G
Sbjct: 207 ERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRR 266
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH+F + +E N V +IDMY KCGC E A ++F+ + ++ + W++M+ GLA +G
Sbjct: 267 IHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGR 326
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+A+ LF+ + ++ +KP+ ++FI +L AC+H G V + + YF MT Y I P I+HY
Sbjct: 327 AEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYG 386
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD RAGLL+EA + I +MP P+ ++WG+LL C+ H N+++A++A + + +LD
Sbjct: 387 CMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPL 446
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
YV++SN+YA + ++E+ R LM++
Sbjct: 447 NDGYYVVLSNIYAEAGRWEDVARVRKLMRD 476
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 189/500 (37%), Positives = 294/500 (58%), Gaps = 10/500 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+IHA +++ L P L + A G I ++ +F Q P+LF++ I S
Sbjct: 45 QIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 104
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ A LL++ +L +S I P T+ S+ K+ + + G +H V+K GL D
Sbjct: 105 INGLKDQAFLLYVQLL-SSQINPNEFTFSSILKSCS----TKSGKLIHTHVLKFGLGLDP 159
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
++ ++ +YA G + A+ +FD + E +V+ +MI AK G ++ +R LFD+M
Sbjct: 160 YVATGLVDIYAKGGDVVSAQKVFDRM-PERSLVSSTAMITCYAKQGNVEAARALFDRMCE 218
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ VSWN MI GY ++ +AL LF+++ + KP E T+V+ L+AC+++GA+ G W
Sbjct: 219 RDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRW 278
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH F+ ++ LN V TA+IDMY KCG E A+ VFN P+K + WN+M+ G AM+GY
Sbjct: 279 IHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGY 338
Query: 303 ENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+A++LF +Q + L+P I+FI L AC H+G VN+ F M + Y IKP I+HY
Sbjct: 339 SQDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHY 398
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
C+V LGRAG L+ A ++I++M + D+++W S+L +C+ HG + K+ A+ +I +
Sbjct: 399 GCLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNI 458
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ S YVL+SN+YA +E + R LMKE I KEPG S IE+D +VHEF AG R H
Sbjct: 459 SNSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHL 518
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
K+ E+Y +L + I+ G
Sbjct: 519 KSKEIYTMLRKMSERIKSHG 538
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 61/269 (22%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAF------------------------------CT 31
K K IH H++K GL DP A+ ++ C
Sbjct: 141 KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 200
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ G++ A +F ++ + ++ WN +I G+SQ P +A++LF +L +P +T
Sbjct: 201 AKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITV 260
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
+ A +Q+G G +H V + + + +I MY+ CG L EA L+F++
Sbjct: 261 VAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPR 320
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ D+VAWN+MI G A G ++ RLFD+M I+G
Sbjct: 321 K-DIVAWNAMITGYAMHGYSQDALRLFDEMQG---------ITG---------------- 354
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
++P++ T + L ACA G + +G
Sbjct: 355 -----LQPTDITFIGTLQACAHAGLVNEG 378
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 183/467 (39%), Positives = 277/467 (59%), Gaps = 36/467 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTII 59
MKDLK+IHA +I+ G ++ +++ FC + GD+NYA VF +I P+ FI+NT+I
Sbjct: 1 MKDLKQIHARVIQLGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFNTMI 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGF +++ PR A + M + T+ L K QLGL G +H +K+GL
Sbjct: 61 RGFGKANDPRKAFDYYKRMQERGLVS-DSFTFSFLLKVCGQLGLVLLGRLMHCSTLKRGL 119
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
F+ NT+++MY G K +I+ SR+LF+
Sbjct: 120 NSHVFVRNTLVHMY------------------------------GTFK--DIEASRQLFE 147
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
++ + V+WN +I +V KF EALE+F M + I+P E T V +L+AC+ LGA+
Sbjct: 148 EIPNPELVAWNIIIDCHVSCGKFNEALEMFSRMLKFGIEPDEATFVVILSACSALGALDF 207
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G W+H+ + T V +++DMY KCG + A ++FN + KK WN+M+ GLA
Sbjct: 208 GRWVHSCISNIGHGCITEVNNSLLDMYAKCGALQEAFEIFNGMNKKNTVTWNTMILGLAS 267
Query: 300 NGYENEAIKLFSGLQSSNL-KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+GY NEA+ LFS + L PD I+F+ VL+AC+H G V++ +F +M + Y I+P+I
Sbjct: 268 HGYANEALALFSNMLEQKLWAPDDITFLVVLSACSHGGMVDKGWRFFDIMKKEYHIQPTI 327
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
KHY CMVD LGRAG +EEA +LI +MP +AI+W +LL+ACR HGN+E+ KQ KQ++E
Sbjct: 328 KHYGCMVDILGRAGFVEEAYRLISNMPMQCNAIVWRTLLAACRLHGNVELGKQVRKQLLE 387
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK-EPGCSLI 464
L+ + S YVL++N YA++ ++ EAM R M + ++K EPG S++
Sbjct: 388 LEPDHSSDYVLLANTYASAGRWNEAMRVRKTMHKRGVQKPEPGNSVV 434
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 192/503 (38%), Positives = 282/503 (56%), Gaps = 9/503 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRI-LAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ ++HA ++ G+ D R+ A+ S D+ L T P + + I
Sbjct: 48 LRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLT--PDPTTVFYTSAI 105
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
S A+ L +ML I P T S A L L R LH K L
Sbjct: 106 HAHSSRGLHLAALALLSEMLGRGLI-PTSHTLSSSLPACHGLALGR---ALHAYAFKLAL 161
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D ++ ++ MYA G AR +FDE+ + VV +M+ AK G +D++R LFD
Sbjct: 162 AGDSYVATALLGMYARGGDADAARALFDEM-PDPHVVPVTAMLTCYAKMGALDDARELFD 220
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M S++ + WN+MI GY ++ + EAL LFR M + P E ++ L+A A+LG
Sbjct: 221 GMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAES 280
Query: 240 GEWIHNFLV-TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G W+H+++ + +LN V TA+IDMYCKCG E A+ VFN++ K + WN+M+ G A
Sbjct: 281 GRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYA 340
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
M+G +A+++FS L+S L P I+FI +L AC+HSG V++ +F M E Y I P I
Sbjct: 341 MHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKI 400
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD LGRAGL+EEA L++SM PD ++W SLL+ACR H N+ + +Q A ++
Sbjct: 401 EHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVA 460
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
S Y+L+SN+YAA +EE R +MK I+KEPGCS IEV +V+EFVAG
Sbjct: 461 GGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDM 520
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
HP+ E+Y +L + +++E G
Sbjct: 521 SHPRTDEIYAMLEKMNGIVKEQG 543
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 192/503 (38%), Positives = 282/503 (56%), Gaps = 9/503 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRI-LAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ ++HA ++ G+ D R+ A+ S D+ L T P + + I
Sbjct: 47 LRRTGELHAAAVRAGVDGDRAVGFRLQRAYAASDRLDLTVTLLRLT--PDPTTVFYTSAI 104
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
S A+ L +ML I P T S A L L R LH K L
Sbjct: 105 HAHSSRGLHLAALALLSEMLGRGLI-PTSHTLSSSLPACHGLALGR---ALHAYAFKLAL 160
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D ++ ++ MYA G AR +FDE+ + VV +M+ AK G +D++R LFD
Sbjct: 161 AGDSYVATALLGMYARGGDADAARALFDEM-PDPHVVPVTAMLTCYAKMGALDDARELFD 219
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M S++ + WN+MI GY ++ + EAL LFR M + P E ++ L+A A+LG
Sbjct: 220 GMPSKDFICWNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAES 279
Query: 240 GEWIHNFLV-TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G W+H+++ + +LN V TA+IDMYCKCG E A+ VFN++ K + WN+M+ G A
Sbjct: 280 GRWLHSYVKNSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYA 339
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
M+G +A+++FS L+S L P I+FI +L AC+HSG V++ +F M E Y I P I
Sbjct: 340 MHGDSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKI 399
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD LGRAGL+EEA L++SM PD ++W SLL+ACR H N+ + +Q A ++
Sbjct: 400 EHYGCMVDLLGRAGLIEEAFHLVQSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVA 459
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
S Y+L+SN+YAA +EE R +MK I+KEPGCS IEV +V+EFVAG
Sbjct: 460 GGLANSGMYILLSNIYAAVGNWEEVARVRSMMKASGIQKEPGCSAIEVGRKVYEFVAGDM 519
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
HP+ E+Y +L + +++E G
Sbjct: 520 SHPRTDEIYAMLEKMNGIVKEQG 542
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 186/518 (35%), Positives = 295/518 (56%), Gaps = 51/518 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAA---SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
M LK++HA ++T ++P +IL +S D+NYA+ VF I+ + F+WNT
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQL-SSSFSDVNYAFRVFDSIENHSSFMWNT 119
Query: 58 IIRGFSQS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR + S A +L+ ML P + T+P + KA A + +G Q+H ++VK
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 179
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G D +++N +I++Y +C G +D +R+
Sbjct: 180 HGFGGDVYVNNGLIHLYGSC--------------------------------GCLDLARK 207
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M R+ VSWNSMI VR ++ AL+LFREMQ ++ +P +TM S+L+ACA LG+
Sbjct: 208 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGS 266
Query: 237 IRQGEWIHNFLVTNC---FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ G W H FL+ C ++ +V ++I+MYCKCG A QVF + K+ L+ WN+M
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 326
Query: 294 VFGLAMNGYENEAIKLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+ G A +G EA+ F + + N++P+ ++F+ +L ACNH G VN+ + YF +M
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAK 410
Y I+P+++HY C+VD + RAG + EA ++ SMP PDA+IW SLL AC K G ++E+++
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Query: 411 QAAKQII-------ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
+ A+ II + N S YVL+S +YA++ ++ + R LM E I KEPGCS
Sbjct: 447 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 506
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
IE++G HEF AG HP+ ++Y L + ++ +G
Sbjct: 507 IEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIG 544
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 291/494 (58%), Gaps = 6/494 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M +LKKIHAH++K L+ ++++ C G+ YA L+F ++ PN F++N +IR
Sbjct: 1 MVELKKIHAHVVKFSLSXSSFLVTKMVDMCNH-HGETEYANLLFKRVADPNAFLYNAMIR 59
Query: 61 GFSQSSTPRNAILLFIDMLVTS----PIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+ + AI + ML S P P + T+P + K A L G Q+HG K
Sbjct: 60 AYKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLGKQVHGHAFK 119
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G + + I N+++ MY C L +A +F+E+ TE D V+WN++I G + G++ +R
Sbjct: 120 FGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEM-TERDAVSWNTLISGHVRLGQMRRARA 178
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+++ + SW +++SGY R ALE FR MQ +I+ E ++VS+L ACA+LGA
Sbjct: 179 IFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVLPACAQLGA 238
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G+WIH + F + V A+I++Y K G + ++F+ + ++ + W++M+ G
Sbjct: 239 LELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERDVISWSTMIVG 298
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA +G EAI+LF +Q + ++P+ I+F+ +L+AC H+G +N+ YF M I+P
Sbjct: 299 LANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFESMERDDNIEP 358
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++HY C+V+ LG +G L++A +LI+ MP PD+ IWG L S+CR HGN+E+ A + +
Sbjct: 359 GVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNLEIVAIAMEHL 418
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+EL+ +++ Y+ +SNLYA +++ R LM + K PGCS IEVD V E+ +G
Sbjct: 419 LELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCSSIEVDNMVQEYASG 478
Query: 477 GRLHPKAPEVYLLL 490
P + +Y +L
Sbjct: 479 DDSKPFSKAIYRVL 492
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 344 bits (883), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 187/518 (36%), Positives = 296/518 (57%), Gaps = 51/518 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAA---SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
M LK++HA ++T ++P +IL +S D+NYA+ VF I+ + F+WNT
Sbjct: 52 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQL-SSSFSDVNYAFRVFDSIENHSSFMWNT 110
Query: 58 IIRGFSQS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR + S A +L+ ML P + T+P + KA A + +G Q+H ++VK
Sbjct: 111 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 170
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G D +++N +I++Y +C G +D +R+
Sbjct: 171 HGFGGDVYVNNGLIHLYGSC--------------------------------GCLDLARK 198
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M R+ VSWNSMI VR ++ AL+LFREMQ ++ +P +TM S+L+ACA LG+
Sbjct: 199 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGS 257
Query: 237 IRQGEWIHNFLVTNC---FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ G W H FL+ C ++ +V ++I+MYCKCG A QVF + K+ L+ WN+M
Sbjct: 258 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 317
Query: 294 VFGLAMNGYENEAIKLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+ G A +G EA+ F + + N++P+ ++F+ +L ACNH G VN+ + YF +M
Sbjct: 318 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 377
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAK 410
Y I+P+++HY C+VD + RAG + EA ++ SMP PDA+IW SLL AC K G ++E+++
Sbjct: 378 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 437
Query: 411 QAAKQIIEL-DKNESC------GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
+ A+ II + NES YVL+S +YA++ ++ + R LM E I KEPGCS
Sbjct: 438 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 497
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
IE++G HEF AG HP+ ++Y L + ++ +G
Sbjct: 498 IEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIG 535
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 298/501 (59%), Gaps = 8/501 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+H + +KTGL D + ++ + G + + VF ++ + ++ WN +I +
Sbjct: 50 EKVHGYAVKTGLESDSYVCNSLMGM-YAALGKMEITHKVFDEMPERDVVSWNGLISSYVG 108
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+AI +F M S ++ T S A + L G +++ VV + E
Sbjct: 109 HGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTE-FEMSVR 167
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
N ++ M+ CG L +AR +FD + + +V W SM+ G G DE+R LF++ +
Sbjct: 168 TGNALVDMFCKCGCLDKARAIFDSMRDK-NVKCWTSMVSGYVSNGRTDEARELFERSPVK 226
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V W +M++GYV+ +F EALELFR MQ I+P F +VSLL CA+ GA+ QG+WIH
Sbjct: 227 DVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIH 286
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N ++ +V TA++DMY KCGC E AL VF + ++ + W S+++GLA NG
Sbjct: 287 GYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIYGLATNGMSG 346
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A+ L+ +++ ++ D I+F+AVLTAC+H G V + + F MTE +KI+P +HYSC+
Sbjct: 347 RALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCL 406
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAI---IWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+D L RAGLL+EAE+LI M + D ++ SLLSA R +GN+++A++ A+++ +++
Sbjct: 407 IDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 466
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG--RL 479
++S + L++++YA++ ++E+ R MK++ I K PGCS IEVDG HEF+ G
Sbjct: 467 SDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEVDGVSHEFIVGNDPSS 526
Query: 480 HPKAPEVYLLLNDLGLLIQEM 500
HPK E+ +L+ L+ ++
Sbjct: 527 HPKMDEINSMLHQTTHLMLDL 547
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 181/379 (47%), Gaps = 68/379 (17%)
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+++ ++S + + LF + L + P T P + K+ +L +G ++HG VK
Sbjct: 1 MLKSLAESKSFTKVLALFGE-LRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKT 59
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GLE D ++ N+++ MYA G + +FDE+ E DVV+WN
Sbjct: 60 GLESDSYVCNSLMGMYAALGKMEITHKVFDEM-PERDVVSWN------------------ 100
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGA 236
+IS YV + +F++A+ +F+ M +E N+K E T+VS L+AC+ L
Sbjct: 101 -------------GLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKN 147
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ GE I+ ++VT FE++ A++DM+CKCGC ++A +F+++ K + CW SMV G
Sbjct: 148 LEIGERIYRYVVTE-FEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSG 206
Query: 297 LA--------------------------MNGYE-----NEAIKLFSGLQSSNLKPDYISF 325
MNGY +EA++LF +Q++ ++PD
Sbjct: 207 YVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVL 266
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+++LT C +G + Q K + E ++ + +VD + G +E A + M
Sbjct: 267 VSLLTGCAQTGALEQGKWIHGYIREN-RVTVDKVVGTALVDMYAKCGCIETALGVFYEMK 325
Query: 386 SDPDAIIWGSLLSACRKHG 404
+ D W SL+ +G
Sbjct: 326 -ERDTASWTSLIYGLATNG 343
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 131/268 (48%), Gaps = 7/268 (2%)
Query: 192 MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
M+ + F + L LF E++ Q + P FT+ +L + +L + +GE +H + V
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
E ++ V +++ MY G E +VF+ +P++ + WN ++ +G +AI +F
Sbjct: 61 LESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQ 120
Query: 312 GL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGR 370
+ + SNLK D + ++ L+AC+ + + + + +++ S++ + +VD +
Sbjct: 121 RMSRESNLKADEGTIVSTLSACSVLKNLEIGERIYRYVVTEFEM--SVRTGNALVDMFCK 178
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLM 430
G L++A + SM D + W S++S +G + A++ ++ D + M
Sbjct: 179 CGCLDKARAIFDSM-RDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKD---VVLWTAM 234
Query: 431 SNLYAASYQFEEAMEERLLMKEVKIEKE 458
N Y +F+EA+E M+ +I +
Sbjct: 235 MNGYVQFNRFDEALELFRCMQTARIRPD 262
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 295/503 (58%), Gaps = 10/503 (1%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IH + K+ + D S ++ S + A F + N+ WN++I + Q+
Sbjct: 172 QIHGLIAKSRYSLDVYMGSALVDM-YSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQN 230
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQF 124
A+ +F+ M+ I+P +T S+ A A L R+G Q+H RV+K D
Sbjct: 231 GPAGKALEVFVRMM-NCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLV 289
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MYA C ++EARL+FD + DVV+ SM+ G AK + +R +F M+ R
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLR-DVVSETSMVSGYAKASSVKAARLMFSNMMER 348
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSWN++I+GY +N + +EA+ LF ++ ++I P+ +T +LLNACA L ++ G H
Sbjct: 349 NVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAH 408
Query: 245 NFLVTNCF------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
++ + F + + V ++IDMY KCG E VF + ++ WN+M+ G A
Sbjct: 409 THILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYA 468
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
NGY EA+++F + S +PD+++ I VL+AC+H+G V + + YF MT + + P
Sbjct: 469 QNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVK 528
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
HY+CMVD LGRAG L+EA LI++MP +PDA++WGSLL+AC+ HGNI + K A++++E
Sbjct: 529 DHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLE 588
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
+D S YVL+SN+YA ++++ + R M+++ + K+PGCS I + +H F+ +
Sbjct: 589 IDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDK 648
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
HP ++YL+L L ++ +G
Sbjct: 649 RHPHKKDIYLILKILTEQMKRVG 671
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 177/346 (51%), Gaps = 5/346 (1%)
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
+H R++K + FI N ++ +Y CGFL +AR +FD + + +WN+++ L K G
Sbjct: 41 VHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQR-NTFSWNAVLGALTKFG 99
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
+DE+ LF M R+ SWN+M+SG+ + +F+EAL +M ++ +E++ S L+
Sbjct: 100 ALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALS 159
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
ACA L + G IH + + + L+ + +A++DMY KC A + F+ + + +
Sbjct: 160 ACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVS 219
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WNS++ NG +A+++F + + ++PD I+ +V +AC + + +
Sbjct: 220 WNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVM 279
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ K + + + +VD + + EA + MP D + S++S K +++ A
Sbjct: 280 KHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL-RDVVSETSMVSGYAKASSVKAA 338
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
+ ++E +N L++ Y + + EEA+ LL+K I
Sbjct: 339 RLMFSNMME--RNVVSWNALIAG-YTQNGENEEAVRLFLLLKRESI 381
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 192/441 (43%), Gaps = 76/441 (17%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++D +K+ H+ + ++ + + +L T G ++ A +F + + + WN ++
Sbjct: 70 LEDARKVFDHMQQ----RNTFSWNAVLGALTK-FGALDEALNLFKCMPERDQCSWNAMVS 124
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GF+Q A+ +DM + ++ S A A L G Q+HG + K
Sbjct: 125 GFAQRDRFEEALRFVVDMH-SEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYS 183
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ + ++ MY+ C ++ A+ FD++D ++V+W
Sbjct: 184 LDVYMGSALVDMYSKCRVVASAQRAFDDMDVR-NIVSW---------------------- 220
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
NS+I+ Y +N +ALE+F M I+P E T+ S+ +ACA L AIR+G
Sbjct: 221 ---------NSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREG 271
Query: 241 EWIHNFLVTNCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVP---------------- 283
IH ++ + N +V+ A++DMY KC A VF+ +P
Sbjct: 272 LQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAK 331
Query: 284 ---------------KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
++ + WN+++ G NG EA++LF L+ ++ P + +F +
Sbjct: 332 ASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNL 391
Query: 329 LTACNHSGKVNQAKDYFT-LMTETYKIK----PSIKHYSCMVDALGRAGLLEEAEKLIRS 383
L AC + + + T ++ + K I + ++D + GL+E+ +
Sbjct: 392 LNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFER 451
Query: 384 MPSDPDAIIWGSLLSACRKHG 404
M + D + W +++ ++G
Sbjct: 452 ML-ERDNVSWNAMIVGYAQNG 471
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%)
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
LL+ C K ++ + +H ++ F + ++D+Y KCG E A +VF+ + ++
Sbjct: 25 LLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRN 84
Query: 287 LSCWNSMVFGLAMNGYENEAIKLF 310
WN+++ L G +EA+ LF
Sbjct: 85 TFSWNAVLGALTKFGALDEALNLF 108
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 297/509 (58%), Gaps = 51/509 (10%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L+++HA +I+ GL +D S+ L C S + + +Y VF + P+ +WNT I+G+S
Sbjct: 41 LEQVHARIIRKGLHQDHFLISQFLTLCNSLS-NFSYTTSVFNGVSSPSTVLWNTYIKGYS 99
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
++ + + LFI M + + P + TYPSL KA +++ ++G HG V+ G+ D
Sbjct: 100 ENYSVSLTVSLFIRMKRSDAV-PDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDV 158
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ ++I +Y CG + AR +FDE+ E +VV+W +MI G A ++ E+R+LFD+M
Sbjct: 159 FVMTSLIDLYGKCGEILCARKVFDEMG-ERNVVSWTAMIAGYASFSDLVEARKLFDEMPE 217
Query: 184 RNTVSWNSMISGYV-----------------RNVK---------------------FKEA 205
+N VSWN++ISGYV RNV F+EA
Sbjct: 218 KNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEA 277
Query: 206 LE---------LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
E +FR E N+KP EF MVSL++AC+++G++ +W+ +++ + +++
Sbjct: 278 PERDVVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHR 337
Query: 257 I-VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
V+ A+IDM KCG +RA ++F +PK+ L + SM+ GL+++G +A+ LFS + +
Sbjct: 338 AHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLN 397
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLE 375
L PD ++F +LTAC+ +G V++ YF M Y I PS HY+CMVD LGRAG L+
Sbjct: 398 EGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLK 457
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYA 435
EA +L++SMP +P A WG+LL AC+ H +IE+ + A Q+ EL+ + YVL+SN+YA
Sbjct: 458 EAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYA 517
Query: 436 ASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
A+ Q+ + R M+E I K PGCS I
Sbjct: 518 AAEQWLDVSLLRNKMRERGIRKIPGCSWI 546
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 299/524 (57%), Gaps = 66/524 (12%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L+++HA +I+ GL +D S+ L C S + + +Y VF + P+ +WNT I+G+S
Sbjct: 41 LEQVHARIIRKGLHQDHFIISQFLTLCNSLS-NFSYTTSVFNGVSSPSTVLWNTYIKGYS 99
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
++ + + LFI M + + P + TYPSL KA +++ ++G HG V+ G+ D
Sbjct: 100 ENYSVSLTVSLFIRMKRSDAV-PDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDV 158
Query: 124 FIHNTIIYMYANCG-------------------------------FLSEARLMFDEVDTE 152
F+ ++I +Y CG L EAR +FDE+ E
Sbjct: 159 FVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEM-PE 217
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS------------------------ 188
+ V+WN++I G KCG++ +R++FD+M RN VS
Sbjct: 218 KNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEEA 277
Query: 189 -------WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
W+++ISGYV+N + EA+++F EM +N+KP EF MVSL++AC+++G++ +
Sbjct: 278 PERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSLELAK 337
Query: 242 WIHNFLVTNCFELNTI-VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
W+ +++ + +++ V+ A+IDM KCG +RA ++F +PK+ L + SM+ GL+++
Sbjct: 338 WVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIH 397
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G +A+ LFS + + L PD ++F +LTAC+ +G V++ YF M Y I PS H
Sbjct: 398 GCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDH 457
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+CMVD LGRAG L+EA +L++SMP +P A WG+LL AC+ H +IE+ + A Q+ EL+
Sbjct: 458 YACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELE 517
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
+ YVL+SN+YAA+ Q+ + R M+E I K PGCS I
Sbjct: 518 PQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 175/447 (39%), Positives = 267/447 (59%), Gaps = 33/447 (7%)
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
+V + + P T+ SL KA + + G +HG + K G + F+ ++ Y N G
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
+ EAR +FDE+ +E DV AW +MI A+ G++ +R+LFD+M RNT SWN+MI GY R
Sbjct: 61 IVEARRVFDEM-SERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSR 119
Query: 199 -------------------------------NVKFKEALELFREMQEQNIKPSEFTMVSL 227
N +F+EAL +F EMQ I P E TM ++
Sbjct: 120 LRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATI 179
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
++ACA LGA+ G+ IH + + F+L+ + +A+IDMY KCG +++L VF + KK L
Sbjct: 180 ISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNL 239
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
CWNS++ GLA++GY EA+ +FS +Q +KP+ ++FI+VL AC H+G V + + F
Sbjct: 240 FCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLS 299
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
M+ + I P I+HY CMVD LG+AGLLE+A +L+RSM +P+++IWG+LL C+ H N++
Sbjct: 300 MSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLK 359
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK-EPGCSLIEV 466
+A+ A + L+ N S Y L+ N+YA ++ E R MKE+ +EK PG S IE+
Sbjct: 360 IAQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIEM 419
Query: 467 DGEVHEFVAGGRLHPKAPEVYLLLNDL 493
D ++H+F A + H + E+Y LL +L
Sbjct: 420 DRKIHQFAASDKSHLASDEIYTLLVEL 446
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 161/338 (47%), Gaps = 31/338 (9%)
Query: 19 DPIAASRILAFCT-----SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAIL 73
D ++ + A+ T + GD++ A +F ++ N WN +I G+S+ +A L
Sbjct: 69 DEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAEL 128
Query: 74 LFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIY 131
LF M P R +++ ++ Y+Q R+ + + G++ D+ TII
Sbjct: 129 LFSQM-------PNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIIS 181
Query: 132 MYANCGFLS---EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS 188
A+ G L E L E+ + DV +++I AKCG +D+S +F K+ +N
Sbjct: 182 ACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFC 241
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL- 247
WNS+I G + +EAL +F MQ + IKP+ T +S+L AC G + +G FL
Sbjct: 242 WNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGR--KRFLS 299
Query: 248 VTNCFELNTIV--VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG---Y 302
++ F + + ++D+ K G E AL++ ++ + NS+++G + G +
Sbjct: 300 MSRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEP----NSVIWGALLGGCKLH 355
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
N I + +S L+P+ + +L N +VN+
Sbjct: 356 RNLKIAQVAVNESKVLEPNNSGYYTLLV--NMYAEVNR 391
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH + ++ G D S ++ + G ++ + +VF +++K NLF WN+II G +
Sbjct: 193 KEIHLYAMEMGFDLDVYIGSALIDM-YAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAV 251
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD-- 122
A+ +F M I+P +T+ S+ A GL +G + R + +F
Sbjct: 252 HGYAEEALAMFSRMQ-REKIKPNGVTFISVLGACTHAGLVEEGRK---RFLSMSRDFSIP 307
Query: 123 -QFIH-NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG 164
+ H ++ + G L +A + + E + V W +++ G
Sbjct: 308 PEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGG 351
>gi|10178273|emb|CAC08331.1| putative protein [Arabidopsis thaliana]
Length = 1280
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 177/478 (37%), Positives = 290/478 (60%), Gaps = 6/478 (1%)
Query: 20 PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDML 79
P++ R + D++YAY +++ P + WN +IRGFS S P +I ++I ML
Sbjct: 787 PVSVDRNYMLAVNVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQML 846
Query: 80 VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFL 139
+ P +TYP L K+ ++L + G LH VVK GLE+D FI NT+I+MY +
Sbjct: 847 RFG-LLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQ 905
Query: 140 SEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRN 199
+ AR +FDE+ + ++V WNS++ AK G++ +R +FD+M R+ V+W+SMI GYV+
Sbjct: 906 ASARKLFDEMPHK-NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKR 964
Query: 200 VKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
++ +ALE+F +M + K +E TMVS++ ACA LGA+ +G+ +H +++ L I+
Sbjct: 965 GEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVIL 1024
Query: 259 VTAIIDMYCKCGCPERALQVF--NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
T++IDMY KCG A VF +V + WN+++ GLA +G+ E+++LF ++ S
Sbjct: 1025 QTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRES 1084
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE 376
+ PD I+F+ +L AC+H G V +A +F + E+ +P +HY+CMVD L RAGL+++
Sbjct: 1085 KIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKD 1143
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAA 436
A I MP P + G+LL+ C HGN+E+A+ K++IEL + YV ++N+YA
Sbjct: 1144 AHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAI 1203
Query: 437 SYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLG 494
+ QF A R M++ ++K G S++++DG H F+A + H + ++Y +L G
Sbjct: 1204 NKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQLTG 1261
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/413 (17%), Positives = 179/413 (43%), Gaps = 39/413 (9%)
Query: 48 KKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG 107
K P++ + ++I G S P AI + +M P R+T+ +L + + G + +
Sbjct: 680 KNPDVITYTSLIHGLCASGRPSEAIFRWNEM-KGKDCYPNRITFMALIQGLCKCGWSGEA 738
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV--DTEFDVVAWNSMIIGL 165
+ ++ +E D ++ +++ + + ++ +F E+ F V + ++ +
Sbjct: 739 LVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAV 798
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 225
++D + + K+ WN +I G+ + ++++ ++ +M + P T
Sbjct: 799 NVTSDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYP 858
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
L+ + ++L + G +H +V + E + + +I MY A ++F+ +P K
Sbjct: 859 FLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHK 918
Query: 286 GLSCWN-------------------------------SMVFGLAMNGYENEAIKLFSG-L 313
L WN SM+ G G N+A+++F +
Sbjct: 919 NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMM 978
Query: 314 QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGL 373
+ + K + ++ ++V+ AC H G +N+ K + + + + ++ + ++D + G
Sbjct: 979 RMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH-LPLTVILQTSLIDMYAKCGS 1037
Query: 374 LEEAEKLI-RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE--LDKNE 423
+ +A + R+ + DA++W +++ HG I + Q ++ E +D +E
Sbjct: 1038 IGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDE 1090
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 125/291 (42%), Gaps = 12/291 (4%)
Query: 71 AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTII 130
A+ L D +V + + P + Y ++ + + G + + +L G + G+E QF N I
Sbjct: 458 AVTLLHD-IVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIY 516
Query: 131 YMYA-NCGFLSEARLMFDEVDTEFD--VVAWNSMIIGLAKCGEIDESRRLFDKMVSR--- 184
A C F+ L+ F+ + ++ L + G ++ + D +
Sbjct: 517 GCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFL 576
Query: 185 -NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+ V+ + I G ++N LELFR++ P L+ A K + + +
Sbjct: 577 GHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADIL 636
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL----QVFNTVPKKGLSCWNSMVFGLAM 299
N +V+ + ++ID +CK G +R L +++ + + S++ GL
Sbjct: 637 FNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCA 696
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
+G +EAI ++ ++ + P+ I+F+A++ G +A YF M E
Sbjct: 697 SGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEE 747
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 176/399 (44%), Gaps = 44/399 (11%)
Query: 37 INYAYLVFTQIKK----PNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYP 92
I+ A+ +F ++++ ++ +++ +I G + A+ L+++ + S I P R
Sbjct: 299 IDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLE-IKRSGIPPDRGILG 357
Query: 93 SLFKAYAQLG-LARDGAQLHGRVVKQGLE------FDQFIHNTIIYM-----------YA 134
L ++++ L+R + G + K+ + F+ FI N +++ Y
Sbjct: 358 KLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYE 417
Query: 135 NCGFLSEARLMFDEVDTEF-DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS----W 189
+ G +L+ D D + + +I L K ++D + L +V + +
Sbjct: 418 SDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMY 477
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM----VSLLNACAKLGAIRQGEWIHN 245
N++I G + + +E+L+L EM++ ++PS+FT+ L C +GA+ + +
Sbjct: 478 NNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRF 537
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG----LSCWNSMVFGLAMNG 301
+ FE T ++ C+ G A + + V +G + + + GL N
Sbjct: 538 Y----GFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNE 593
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ ++LF + ++ PD I++ ++ A + + +A F M + +KP++ Y
Sbjct: 594 GVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMV-SKGLKPTVATY 652
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLL 397
+ M+D + G ++ I M D PD I + SL+
Sbjct: 653 NSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI 691
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 20/231 (8%)
Query: 204 EALELFREMQEQNI-KPSEFTMVSLLNACAKLGAIRQGEWIHNFL--VTNC-FELNTIVV 259
EA +F ++E + P+ +T LL A +K + E + L + +C F + +
Sbjct: 159 EASSVFDRVREMGLCVPNAYTYNCLLEAISKSNS-SSVELVEARLKEMRDCGFHFDKFTL 217
Query: 260 TAIIDMYCKCGCPERALQVFNTVPKKGLSCW------NSMVFGLAMNGYENEAIKLFSGL 313
T ++ +YC G ERAL VFN + +G W +V G ++A +L L
Sbjct: 218 TPVLQVYCNTGKSERALSVFNEILSRG---WLDEHISTILVVSFCKWGQVDKAFELIEML 274
Query: 314 QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGL 373
+ +++ +Y ++ ++ ++++A F M + I Y ++ L +
Sbjct: 275 EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRM-GMNADIALYDVLIGGLCKHKD 333
Query: 374 LEEAEKL---IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
LE A L I+ PD I G LL C E+++ I ++DK
Sbjct: 334 LEMALSLYLEIKRSGIPPDRGILGKLL--CSFSEESELSRITEVIIGDIDK 382
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 83/199 (41%), Gaps = 45/199 (22%)
Query: 30 CTSPAGDINYAYLVFTQIKK-----PNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPI 84
C AG ++ A VF ++++ PN + +N ++ S+S++
Sbjct: 150 CLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSS---------------- 193
Query: 85 QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL 144
S+ A+L RD G FD+F ++ +Y N G A
Sbjct: 194 --------SVELVEARLKEMRDC----------GFHFDKFTLTPVLQVYCNTGKSERALS 235
Query: 145 MFDEVDTE--FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR----NTVSWNSMISGYVR 198
+F+E+ + D +++ K G++D++ L + + R N ++ +I G+V+
Sbjct: 236 VFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVK 295
Query: 199 NVKFKEALELFREMQEQNI 217
+ +A +LF +M+ +
Sbjct: 296 ESRIDKAFQLFEKMRRMGM 314
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/460 (36%), Positives = 279/460 (60%), Gaps = 5/460 (1%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
+ I+ A +F ++ + +L W T++ G+ Q ++ LF M + I P + +
Sbjct: 315 SNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVI-PDEVALVT 373
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ A L G +H +V G+ D F+ N ++ +YA CG L EA F+++ +
Sbjct: 374 VLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCK- 432
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+WNSM+ G + G +D++R F+K+ ++ VSWN+M++ YV++ F E+ E+F +MQ
Sbjct: 433 SAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQ 492
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
N+KP + T++SLL++CAK+GA+ G W++ ++ N ++ ++ TA+IDMY KCGC E
Sbjct: 493 SSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVE 552
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A ++F + +K + W +M+ AM G EAI L+ ++ +KPD+++FIA+L AC+
Sbjct: 553 MAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACS 612
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
H G V++ YF + Y I P+I HY CMVD LGR G LEE K I MP +PD IW
Sbjct: 613 HGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIW 672
Query: 394 GSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEV 453
SL+ ACR H N+E+A+QA KQ+IE+D + +VL+SN+YA + ++++ + R + E
Sbjct: 673 SSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHET 732
Query: 454 KIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+ K+PG ++IE +G VHEFVA + + ++ +L D+
Sbjct: 733 GVPKQPGFTMIEQNGVVHEFVASNLV---SADILCMLQDI 769
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 217/426 (50%), Gaps = 36/426 (8%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H ++K G ++ + ++ S G + +F ++ ++ WNT+I +
Sbjct: 154 EVHGRILKCGFGRNKSLNNNLMGL-YSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLK 212
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
R A+ LF +MLV S + P +T SL A+L G +LH +V L +
Sbjct: 213 GMYREALDLFDEMLV-SGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSL 271
Query: 126 HNTIIYMYANCGFLSEARLMFDEVD-TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
N ++ MY+ CG + EA + D +E DVV W +++ G K +ID++R+LFDKM R
Sbjct: 272 LNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNER 331
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSW +M+SGYV+ + E+LELF++M+ +N+ P E +V++L+AC L G +H
Sbjct: 332 SLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVH 391
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG--- 301
F+VT ++ + A++D+Y KCG + AL+ F +P K + WNSM+ G +G
Sbjct: 392 AFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVD 451
Query: 302 ----------------------------YENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
NE+ ++F +QSSN+KPD + I++L++C
Sbjct: 452 KARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCA 511
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
G +N + + E +I + ++D G+ G +E A ++ + + + +W
Sbjct: 512 KVGALNHGI-WVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQII-EKNVFVW 569
Query: 394 GSLLSA 399
++++A
Sbjct: 570 TAMMAA 575
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/530 (25%), Positives = 239/530 (45%), Gaps = 79/530 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++ IHAHLI L DP S++LAF S +++ A+ + + +P IWNT++
Sbjct: 48 IREFSPIHAHLITANLIHDPEITSQVLAFLLS-VNNLDCAHQILSYSHEPESIIWNTLLE 106
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ P+ + + M VT + T+ L A + + G+++HGR++K G
Sbjct: 107 NKLKEGCPQEVLECYYHM-VTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFG 165
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
++ ++N ++ +Y+ CG L E +F+++ T DV++WN+M
Sbjct: 166 RNKSLNNNLMGLYSKCGKLKEVCQLFEKM-THRDVISWNTM------------------- 205
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
IS YV ++EAL+LF EM + P E TMVSL++ CAKL + G
Sbjct: 206 ------------ISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMG 253
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCG-----------CPE---------------- 273
+ +H ++V N + ++ ++DMY KCG C E
Sbjct: 254 KRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYV 313
Query: 274 ------RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIA 327
+A Q+F+ + ++ L W +M+ G GY E+++LF ++ N+ PD ++ +
Sbjct: 314 KSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVT 373
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
VL+AC H + + + TY + + ++D + G L+EA + +P
Sbjct: 374 VLSACVHLEDFDLGRSVHAFIV-TYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPC- 431
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEER 447
A W S+L + G ++ A+ +I E D + M N Y F E+ E
Sbjct: 432 KSAASWNSMLDGFCRSGGVDKARDFFNKIPEKD---IVSWNTMVNAYVKHDLFNESFEIF 488
Query: 448 LLMKE--VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGL 495
M+ VK +K SL+ +V G H VY+ N++G+
Sbjct: 489 CKMQSSNVKPDKTTLISLLSSCAKV-----GALNHGIWVNVYIEKNEIGI 533
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 191/501 (38%), Positives = 289/501 (57%), Gaps = 43/501 (8%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTS-----PAGDI---NYAYLVFTQIKKPNLFIW 55
L++IHA +I G + + R L T+ PA YA +F QI +P+ F+W
Sbjct: 17 LRQIHALMIVNGFTSN-VGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIPQPDTFMW 75
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
NT IRG SQS P +A+ L+ M S ++P T+P + KA +L G+ +HGRV
Sbjct: 76 NTYIRGSSQSHDPVHAVALYAQMTHRS-VKPDNFTFPLVLKACTKLFWVNTGSVVHGRVF 134
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT------------------------ 151
+ G + + NT++ +A CG L A +FD+ D
Sbjct: 135 RLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRGDLSVARK 194
Query: 152 ------EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEA 205
+ D+V+WN MI K GE++ +RRLFD+ ++ VSWN+M+ GYV + +EA
Sbjct: 195 LFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVGGYVLHNLNQEA 254
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH-NFLVTNCFELNTIVVTAIID 264
LELF EM E P E TM+SLL+ACA LG GE +H + N +L+T++ A++D
Sbjct: 255 LELFDEMCEVGECPDEVTMLSLLSACADLG--DXGEKVHAKIMELNKGKLSTLLGNALVD 312
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
MY KCG + + VF + K + WNS++ GLA +G+ E++ LF +Q + + PD I+
Sbjct: 313 MYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCPDEIT 372
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
F+ VL AC+H+G V++ YF LM YKI+P+I+H C+VD L RAGLL+EA I SM
Sbjct: 373 FVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDFIASM 432
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
+P+AI+W SLL AC+ HG++E+AK+A +Q++ + ++S YVL+SN+YA+ +++ A
Sbjct: 433 KIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEWDGAE 492
Query: 445 EERLLMKEVKIEKEPGCSLIE 465
R LM + + K G S +E
Sbjct: 493 NVRKLMDDNGVTKTRGSSFVE 513
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 193/425 (45%), Gaps = 62/425 (14%)
Query: 19 DPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM 78
D +A S ++A + GD++ A +F ++ K +L WN +I +++ A LF +
Sbjct: 172 DVVAWSALIA-GYAQRGDLSVARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDE- 229
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
+P++ +++ ++ Y L ++ +L + + G D+ +++ A+ G
Sbjct: 230 ---APMK-DVVSWNAMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLGD 285
Query: 139 LSE---ARLMFDEVDT-EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMIS 194
E A++M E++ + + N+++ AKCG I + +F + ++ VSWNS+I
Sbjct: 286 XGEKVHAKIM--ELNKGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIG 343
Query: 195 GYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFEL 254
G + +E+L LFREMQ + P E T V +L AC+ G + +G + +L+ N +++
Sbjct: 344 GLAFHGHAEESLGLFREMQRTKVCPDEITFVGVLAACSHTGNVDEGN-RYFYLMKNKYKI 402
Query: 255 NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ 314
+ CGC +V LA G EA F +
Sbjct: 403 EPNIR--------HCGC---------------------VVDMLARAGLLKEA---FDFIA 430
Query: 315 SSNLKPDYISFIAVLTACNHSG---------------KVNQAKDYFTLMTETYKIKPSIK 359
S ++P+ I + ++L AC G +V+Q+ DY L++ Y
Sbjct: 431 SMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDY-VLLSNVYASHGEWD 489
Query: 360 HYSCMVDALGRAGLLE-EAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ + G+ + + + +P+ + +LL AC +G++E+AK+ ++++
Sbjct: 490 GAENVRKLMDDNGVTKTRGSSFVEAYRIEPNPVNGRTLLGACIVYGDVELAKRVNEELLR 549
Query: 419 LDKNE 423
L ++E
Sbjct: 550 LRRDE 554
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 42/216 (19%)
Query: 234 LGAIRQGEWIHNFLVTNCFELNT-----IVVTAIIDMY---CKCGCPERALQVFNTVPKK 285
LG +RQ IH ++ N F N +V+T + M + A+Q+F +P+
Sbjct: 14 LGTLRQ---IHALMIVNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIPQP 70
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN-----HSGKVNQ 340
WN+ + G + + A+ L++ + ++KPD +F VL AC ++G V
Sbjct: 71 DTFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNTGSVVH 130
Query: 341 AKDYF-----------TLMTETYKI--------------KPSIKHYSCMVDALGRAGLLE 375
+ + TL+ K K + +S ++ + G L
Sbjct: 131 GRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRGDLS 190
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
A KL MP D + W +++A KHG +E A++
Sbjct: 191 VARKLFDEMPK-RDLVSWNVMITAYTKHGEMECARR 225
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 288/502 (57%), Gaps = 9/502 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M LK+IHA+ ++ GL ++L D+ YA +F QI KP+++++N I+
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQL-----PDLPYACTLFDQIPKPSVYLYNKFIQ 55
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
FS P LL+ M + P + ++ LF A A L G LH K G
Sbjct: 56 TFSSIGHPHRCWLLYCQM-CSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFA 114
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F ++ MYA G L AR +FDE+ D+ WNS+I G A+ G ++ + LF+K
Sbjct: 115 SDMFAMTALLDMYAKLGMLRSARQLFDEMPVR-DIPTWNSLIAGYARSGHMEAALELFNK 173
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQ 239
M RN +SW ++ISGY +N K+ +ALE+F ++ E+ KP+E ++ S+L AC++LGA+
Sbjct: 174 MPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDI 233
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV-PKKGLSCWNSMVFGLA 298
G+ I + N F N V A+++++ +CG E A QVF+ + K+ L WN+M+ GLA
Sbjct: 234 GKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLA 293
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G +A++L+ + ++PD ++F+ +L AC H G V + + F M +++ P +
Sbjct: 294 VHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKL 353
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C+VD LGRAG L+EA LI++MP PD++IWG+LL AC HGN+E+ + AA+ + +
Sbjct: 354 EHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFK 413
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ YV++SN+YA + + R +MK I K G S IEV +HEF+ R
Sbjct: 414 LEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYSYIEVGDGIHEFIVEDR 473
Query: 479 LHPKAPEVYLLLNDLGLLIQEM 500
+ + + +LLL + L Q +
Sbjct: 474 ITSRCVQPFLLLLHVTLAPQPV 495
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/494 (35%), Positives = 294/494 (59%), Gaps = 10/494 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTS-PAGDIN-YAYLVFTQIKKPNLFIWNTIIRGF 62
K++HAH+ + L + + +L F T+ P ++ Y +L+F+Q+ PN F+++ +IR +
Sbjct: 28 KQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSALIRAY 87
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+++ ++I L+ ML + + P T+ +LF L G+QLH G D
Sbjct: 88 ARNGPFHHSIRLYTSML-NNNVSPVSFTFSALFSLLKNPSL---GSQLHLHAFLFGFVND 143
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
++ NTII+MY G L AR +FDE+ DVV W +I+ A+ G++D + LF +
Sbjct: 144 LYVGNTIIHMYVKFGVLDCARKVFDEMPHR-DVVTWTELIVAYARSGDMDSACELFVGLP 202
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
++ V+W SM++GY +N K+AL+ FR+M+E + E T+V ++ACA+LG +W
Sbjct: 203 VKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADW 262
Query: 243 IHNFLVTNCFEL--NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
I ++ F N V +A+IDMY KCG E A VF + + + ++SM+ G A++
Sbjct: 263 IREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVH 322
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G AIKLF + + +KP++++F+ + TAC+H+G V Q + F M E Y + P+ H
Sbjct: 323 GRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADH 382
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+CM D LGRAG LE+A +L+++MP +P+ +WG+LL A HGN ++A+ A++ + EL+
Sbjct: 383 YACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELE 442
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV-DGEVHEFVAGGRL 479
+ Y+L+S YA + ++++ R LM+E ++ K PGCS +E +G +HEF AG
Sbjct: 443 PDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVK 502
Query: 480 HPKAPEVYLLLNDL 493
HP+ E+ L+DL
Sbjct: 503 HPEINEIKKALDDL 516
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 286/473 (60%), Gaps = 39/473 (8%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD A VF +I + ++ WN +I G+ ++ A+ LF +M+ T+ ++P T S+
Sbjct: 144 GDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN-VRPDEGTLVSV 202
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A AQ G +E + +H+ + + GF S +++
Sbjct: 203 VSACAQSG---------------SIELGRQVHSWVDDDDDDHGFSSSLKIV--------- 238
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
N++I +KCG+++ + LF+ + ++ VSWN++I GY +KEAL LF+EM
Sbjct: 239 ----NALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLR 294
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL------VTNCFELNTIVVTAIIDMYCK 268
P++ T++S+L ACA LGAI G WIH ++ VTN T + T++IDMY K
Sbjct: 295 SGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTN----ETSLRTSLIDMYAK 350
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG E A QVFN++ + LS WN+M+FG AM+G N A LFS ++ + ++PD I+F+ +
Sbjct: 351 CGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGL 410
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC+HSG ++ + F MT+ Y + P ++HY CM+D LG +GL +EAE++I +MP +P
Sbjct: 411 LSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEP 470
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D +IW SLL AC+KHGN+E+A+ A+++I+++ S YVL+SN+YA + ++E+ R
Sbjct: 471 DGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRG 530
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ ++K PGCS IEVD VHEF+ G +LHP+ E+Y +L ++ + ++E G
Sbjct: 531 VLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAG 583
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/502 (36%), Positives = 282/502 (56%), Gaps = 32/502 (6%)
Query: 21 IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLV 80
+A + + G I A L+F +I PN+ WN II G++Q+ + A LF M V
Sbjct: 458 VATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPV 517
Query: 81 TSPIQ------------------------------PQRLTYPSLFKAYAQLGLARDGAQL 110
+ P ++ S A A +G G +
Sbjct: 518 KNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVI 577
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
H +K G +F+ ++ N +I MYA CG + + +F + + D V+WNS+I GL++
Sbjct: 578 HSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK-DTVSWNSLISGLSENYM 636
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
+D++R +F+KM R+ VSW ++IS YV+ + AL+LF +M + IKP++ T+ SLL+A
Sbjct: 637 LDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSA 696
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
C LGAI+ GE H + F+ V ++I MY KCG E VF +P+ L W
Sbjct: 697 CGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGY-EDGFCVFEEMPEHDLITW 755
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N+++ G A NG EAIK+F ++ + PD +SF+ VL AC+H+G V++ +F MT+
Sbjct: 756 NAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQ 815
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
Y I P + HY+CMVD LGRAG L EAE LI +MP PD++IW +LL ACR H N+E+ +
Sbjct: 816 KYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQ 875
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
+ A+++ ++ K +S YVL+SNL+A+ +++ E R LMK+ + KEPG S I+V ++
Sbjct: 876 RVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKL 935
Query: 471 HEFVAGGRLHPKAPEVYLLLND 492
H FV G R H + E+Y L +
Sbjct: 936 HCFVTGDRTHDQIEEIYSALKE 957
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 176/369 (47%), Gaps = 47/369 (12%)
Query: 12 IKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNA 71
IKTG D + S IL T G ++ A F + + N + W T+I
Sbjct: 388 IKTGYEGDVVVGSAILNAYTR-NGSLDLAMHFFETMPERNEYSWTTMI------------ 434
Query: 72 ILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIY 131
A+AQ G D QL+ RV +Q + ++
Sbjct: 435 ------------------------AAFAQCGRLDDAIQLYERVPEQTVA----TKTAMMT 466
Query: 132 MYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNS 191
YA G + +ARL+FDE+ +VVAWN++I G + G + E++ LF KM +N+ SW +
Sbjct: 467 AYAQVGRIQKARLIFDEILNP-NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAA 525
Query: 192 MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
MI+G+V+N + +EALEL E+ PS+ + S L+ACA +G + G IH+ +
Sbjct: 526 MIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTG 585
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
+ N+ V+ +I MY KCG E VF T+ K WNS++ GL+ N ++A +F
Sbjct: 586 CQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFE 645
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA 371
+ K D +S+ A+++A +G A D F M IKP+ + ++ A G
Sbjct: 646 KMP----KRDVVSWTAIISAYVQAGHGEVALDLFLDML-ARGIKPNQLTVTSLLSACGNL 700
Query: 372 GLLEEAEKL 380
G ++ E+
Sbjct: 701 GAIKLGEQF 709
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 197/390 (50%), Gaps = 23/390 (5%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A VF ++ + ++ WN++I G+SQ+ A LLF D V I+ T+ L
Sbjct: 185 GRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF-DAFVGKNIR----TWTIL 239
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
YA+ G + + V + E + N +I Y G L AR +FDE+ E +
Sbjct: 240 LTGYAKEGRIEEARE----VFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEM-PEKN 294
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V +WNS++ G C + E+R LFD+M RN+VSW MISGYV + EA ++F +M
Sbjct: 295 VASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCR 354
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+P + V +L+A L + + + +E + +V +AI++ Y + G +
Sbjct: 355 TVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDL 414
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A+ F T+P++ W +M+ A G ++AI+L+ + + A++TA
Sbjct: 415 AMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATK----TAMMTAYAQ 470
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
G++ +A+ F + + P++ ++ ++ + G+L+EA+ L + MP A W
Sbjct: 471 VGRIQKARLIFDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSA-SWA 524
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNES 424
++++ ++ E +++A + +IEL ++ S
Sbjct: 525 AMIAGFVQN---EESREALELLIELHRSGS 551
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 130/258 (50%), Gaps = 24/258 (9%)
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
N+ I L + G ++E+RR+F++M+ R+ VSWNSMI+GY +N K EA LF +NI+
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR 234
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
T LL AK G I + + + E N + A+I Y + G + A ++
Sbjct: 235 ----TWTILLTGYAKEGRIEEAREVFESMT----ERNVVSWNAMISGYVQNGDLKNARKL 286
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
F+ +P+K ++ WNS+V G +EA +LF + N +S++ +++ H
Sbjct: 287 FDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERN----SVSWMVMISGYVHISDY 342
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS-------DPDAI 391
+A D F M T +P + ++ A+ LE LI S+ + D +
Sbjct: 343 WEAWDVFVKMCRTVA-RPDQSIFVVVLSAITGLDDLE----LIGSLRPIAIKTGYEGDVV 397
Query: 392 IWGSLLSACRKHGNIEMA 409
+ ++L+A ++G++++A
Sbjct: 398 VGSAILNAYTRNGSLDLA 415
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/496 (36%), Positives = 292/496 (58%), Gaps = 39/496 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAF----CTSPAGDINYAYLVFTQIKKP-NLFIWNTI 58
L++IHA I+ G++ + L F SP ++YA+ VF++I+KP N+FIWNT+
Sbjct: 33 LRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPP-PMSYAHKVFSKIEKPINVFIWNTL 91
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IRG+++ +A L+ +M V+ ++P TYP L KA + R G +H V++ G
Sbjct: 92 IRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 151
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
++ N+++++YANC G++ + ++F
Sbjct: 152 FGSLIYVQNSLLHLYANC--------------------------------GDVASAYKVF 179
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
DKM ++ V+WNS+I+G+ N K +EAL L+ EM + IKP FT+VSLL+ACAK+GA+
Sbjct: 180 DKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT 239
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+ +H +++ N ++D+Y +CG E A +F+ + K W S++ GLA
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 299 MNGYENEAIKLFSGLQSS-NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
+NG+ EAI+LF ++S+ L P I+F+ +L AC+H G V + +YF M E YKI+P
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 359
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+H+ CMVD L RAG +++A + I+SMP P+ +IW +LL AC HG+ ++A+ A QI+
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQIL 419
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+L+ N S YVL+SN+YA+ ++ + + R M ++K PG SL+EV VHEF+ G
Sbjct: 420 QLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGD 479
Query: 478 RLHPKAPEVYLLLNDL 493
+ HP++ +Y L ++
Sbjct: 480 KSHPQSDAIYAKLKEM 495
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 289/487 (59%), Gaps = 4/487 (0%)
Query: 6 KIHAHLIKTGL-AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+IH K G DP S ++A + G I A +F ++ ++ WN +I G+SQ
Sbjct: 136 EIHGLASKFGFFHADPFIQSALIAMYAA-CGRIMDARFLFDKMSHRDVVTWNIMIDGYSQ 194
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ + + L+ +M TS +P + ++ A A G G +H + G
Sbjct: 195 NAHYDHVLKLYEEM-KTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSH 253
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I +++ MYANCG + AR ++D++ ++ VV+ +M+ G AK G + ++R +FD+MV +
Sbjct: 254 IQTSLVNMYANCGAMHLAREVYDQLPSKHMVVS-TAMLSGYAKLGMVQDARFIFDRMVEK 312
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V W++MISGY + + EAL+LF EMQ + I P + TM+S+++ACA +GA+ Q +WIH
Sbjct: 313 DLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIH 372
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ N F + A+IDMY KCG +A +VF +P+K + W+SM+ AM+G +
Sbjct: 373 TYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDAD 432
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
AI LF ++ N++P+ ++FI VL AC+H+G V + + +F+ M ++I P +HY CM
Sbjct: 433 SAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCM 492
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD RA L +A +LI +MP P+ IIWGSL+SAC+ HG IE+ + AA +++EL+ +
Sbjct: 493 VDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHD 552
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
V++SN+YA ++++ R LMK + KE CS IEV+ EVH F+ R H ++
Sbjct: 553 GALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSD 612
Query: 485 EVYLLLN 491
E+Y L+
Sbjct: 613 EIYKKLD 619
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 223/475 (46%), Gaps = 74/475 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAF-----CTSPAGDINYAYLVFTQIKKPNLFIW 55
++ +K+IHA ++++ + + +++ SP+ ++YA +F+ I P
Sbjct: 25 LRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSA-LDYALSLFSHIPNPPTRFS 83
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N ++R FS+ TP N + L++ L + R ++P L KA ++L G ++HG
Sbjct: 84 NQLLRQFSRGPTPENTLSLYLH-LRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLAS 142
Query: 116 KQG-LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
K G D FI + +I MYA CG + +AR +FD++ + DVV WN MI G
Sbjct: 143 KFGFFHADPFIQSALIAMYAACGRIMDARFLFDKM-SHRDVVTWNIMIDG---------- 191
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
Y +N + L+L+ EM+ +P + ++L+ACA
Sbjct: 192 ---------------------YSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHA 230
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP----------- 283
G + G+ IH F+ N F + + + T++++MY CG A +V++ +P
Sbjct: 231 GNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAML 290
Query: 284 --------------------KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
+K L CW++M+ G A + EA++LF+ +Q + PD I
Sbjct: 291 SGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQI 350
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+ ++V++AC + G + QAK + + ++ + ++D + G L +A ++ +
Sbjct: 351 TMLSVISACANVGALVQAK-WIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFEN 409
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASY 438
MP + I W S+++A HG+ + A ++ E + E G + LYA S+
Sbjct: 410 MPRK-NVISWSSMINAFAMHGDADSAIALFHRMKEQNI-EPNGVTFIGVLYACSH 462
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/500 (37%), Positives = 302/500 (60%), Gaps = 14/500 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +K+ HA+LI T P+ A++ L + YA+ +F QI +P+LFI+NT+I+
Sbjct: 192 INQIKQTHANLITTAQITLPVIANKFLK--NVALASLTYAHKLFDQIPQPDLFIYNTMIK 249
Query: 61 GFSQS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
S S + ++I +F ++ S P R ++ F A R+G Q+ VK GL
Sbjct: 250 SHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGL 309
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDE-VDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ + F+ N +I M+ G + +AR +FD VD +F +WN+MI G + ++ LF
Sbjct: 310 DGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDF--YSWNTMIGAYVGSGNMVLAKELF 367
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D+M R+ VSW+++I+GYV+ F EAL+ F +M + +KP+E+TMVS L AC+ L A+
Sbjct: 368 DEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALD 427
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGL 297
QG+WIH ++ + ++N ++ ++IDMY KCG + A VF+ K+ + WN+M+ G
Sbjct: 428 QGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGF 487
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AM+G EAI +F ++ + P+ ++FIA+L AC+H V + K YF LM Y I P
Sbjct: 488 AMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPE 547
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY CMVD L R+G L+++E++I SMP PD IWG+LL+ACR + ++E + + I
Sbjct: 548 IEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIK 607
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI----EKEPGCSLIEVDGEVHEF 473
E+D N VL+ N+Y+ S ++ EA R++ ++ +I +K PG S IE++G HEF
Sbjct: 608 EIDPNHIGCNVLLGNIYSTSGRWNEA---RMVREKNEINSDRKKIPGFSSIELNGVFHEF 664
Query: 474 VAGGRLHPKAPEVYLLLNDL 493
+ G R HP++ E+Y L+++
Sbjct: 665 LVGDRSHPQSREIYSFLDEM 684
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 191/563 (33%), Positives = 303/563 (53%), Gaps = 65/563 (11%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +K+IHA ++K L ++ +++A S + A VF QI+ P++ ++NT+IR
Sbjct: 30 LNQVKQIHAQVLKANLHRESFVGQKLIA-AFSLCRQMTLAVNVFNQIQDPDVLLYNTLIR 88
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++S P A +F +M S + TYP L KA + R +H +V K G
Sbjct: 89 AHVRNSEPLLAFSVFFEMQ-DSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFC 147
Query: 121 FDQFIHNTIIYMYANCGF---------------------------------LSEARLMFD 147
D F+ N++I Y CG L EAR +FD
Sbjct: 148 LDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFD 207
Query: 148 EV--------DTEFD----------------------VVAWNSMIIGLAKCGEIDESRRL 177
E+ +T D VV+W++M++G +K G++D +R L
Sbjct: 208 EMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARIL 267
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FDKM +N V W MISGY K+A+ L+ +M+E +K + T++S+L+ACA G +
Sbjct: 268 FDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLL 327
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G+ +H + F+ +T V A+IDMY KCG E AL +F+ + +K + WN+++ GL
Sbjct: 328 GLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGL 387
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AM+G+ +A++LFS ++ PD ++F+ VL AC H+G V++ YF M Y + P
Sbjct: 388 AMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPE 447
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
++HY CMVD LGR G L+EA +L+ SMP +P+AIIWG+LL ACR H +A++ +++
Sbjct: 448 VEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLV 507
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+ + ++S ++SN+YAA+ ++ RL MK I+K G S IEVD EVHEF
Sbjct: 508 KSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFD 567
Query: 478 RLHPKAPEVYLLLNDLGLLIQEM 500
R HPK+ +Y ++ LG I ++
Sbjct: 568 RSHPKSDRIYKTIDGLGQHINKL 590
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 182/501 (36%), Positives = 284/501 (56%), Gaps = 18/501 (3%)
Query: 5 KKIHAHLIKTGL----AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
IH L+K GL A P A A SP ++A +F ++ + L + R
Sbjct: 30 SSIHCLLLKAGLLHVGAHLPTALLSAYAALGSP----DHARRLFDEMPEQGLVPRTAMAR 85
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG--LAR--DGAQLHGRVVK 116
S AI +F DM V + P + A G AR G ++H +V
Sbjct: 86 AHVASGQAAQAIAVFGDM-VADGVFPDNVALAVALGACHGAGSWTARRNPGKKIHALIVT 144
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G+E D F+ +I +Y CG L+ +R +FD++ + + WN+M+ A+ G++D +
Sbjct: 145 SGIEPDVFVSTELIRVYGECGKLAVSRRVFDDMPSR-STITWNAMLHQYARHGKVDTAYE 203
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN---IKPSEFTMVSLLNACAK 233
LF M R+ VSWN++++GY + +EAL LFR+M + + P+ TM ++L ACA
Sbjct: 204 LFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAG 263
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK-GLSCWNS 292
G + G W+H ++ N + + +IDMYCKCG + ALQVF P+K L W +
Sbjct: 264 AGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKRDLFSWTT 323
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
++ GLAM+G +A+++F +Q + + PD ++ + VL AC H G V++ YF M +
Sbjct: 324 VICGLAMHGRATDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKF 383
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+I P I+HY CM+D LGR G L+EA +IR+MP DP+ +IWG+ LSAC+ HGN+E+ K A
Sbjct: 384 RITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIA 443
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A+++ LD ++ G V++S++YA + + ER M ++++K PGCS IE+ GEVHE
Sbjct: 444 AEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEVHE 503
Query: 473 FVAGGRLHPKAPEVYLLLNDL 493
FVAGG HP+ E+ +L D+
Sbjct: 504 FVAGGSQHPQYAEICSVLQDV 524
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/495 (36%), Positives = 286/495 (57%), Gaps = 43/495 (8%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H ++K G D I + +L F + GD+ A VF + + ++ N +I S+
Sbjct: 33 HCQIMKMGFEYDMILQTGLLDF-YAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGY 91
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
A LF +M E + N
Sbjct: 92 VEEARNLFDNMT----------------------------------------ERNSCSWN 111
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS-RNT 186
++I Y G ++ ARLMFD + DVV+WN++I G K ++ ++ LF M S RN+
Sbjct: 112 SMITCYCKLGDINSARLMFD-CNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNS 170
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
V+WN+MIS YV+ +F A+ +F++MQ +N+KP+E TMVSLL+ACA LGA+ GEWIH +
Sbjct: 171 VTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGY 230
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ T +++ ++ A+IDMYCKCG E A+ VF+ + +K + CWNS++ GL MNG EA
Sbjct: 231 IRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEA 290
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
I F ++ +KPD ++F+ +L+ C+HSG ++ + YF+ M Y ++P ++HY CMVD
Sbjct: 291 IAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVD 350
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGRAG L+EA +LIR+MP P++++ GSLL AC+ H + ++ +Q +Q++ELD +
Sbjct: 351 LLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGN 410
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
YV +SNLYA+ ++++ R LM + + K PGCS IEV+ VHEFVAG HP+ ++
Sbjct: 411 YVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQI 470
Query: 487 YLLLNDLGLLIQEMG 501
L+++ ++ G
Sbjct: 471 NAFLDEIAKELKGQG 485
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 147/336 (43%), Gaps = 45/336 (13%)
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
++ + + P + ++ + ++ A G A+ G H +++K G E+D + ++ YA
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYA---- 56
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
K G++ ++R+F M R+ V+ N+MIS +
Sbjct: 57 ----------------------------KVGDLKCAKRVFMGMPRRDVVANNAMISALSK 88
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
+ +EA LF M E+N + S++ KLG I L+ +C + +V
Sbjct: 89 HGYVEEARNLFDNMTERN----SCSWNSMITCYCKLGDINSAR-----LMFDCNPVKDVV 139
Query: 259 V-TAIIDMYCKCGCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
AIID YCK A ++F + + WN+M+ G AI +F +QS
Sbjct: 140 SWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSE 199
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE 376
N+KP ++ +++L+AC H G ++ ++ T ++K + + ++D + G LE
Sbjct: 200 NVKPTEVTMVSLLSACAHLGALDMG-EWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEA 258
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
A + + S + W S++ +G E A A
Sbjct: 259 AIDVFHGL-SRKNIFCWNSIIVGLGMNGRGEEAIAA 293
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M ++ PS+ + +L +CA G + GE H ++ FE + I+ T ++D Y K G
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ A +VF +P++ + N+M+ L+ +GY EA LF + N S+ +++T
Sbjct: 61 LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERN----SCSWNSMITC 116
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
G +N A+ LM + +K + ++ ++D ++ L A++L M S +++
Sbjct: 117 YCKLGDINSAR----LMFDCNPVKDVVS-WNAIIDGYCKSKQLVAAQELFLLMGSARNSV 171
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQI 416
W +++SA + G A +Q+
Sbjct: 172 TWNTMISAYVQCGEFGTAISMFQQM 196
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Query: 7 IHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
IH ++ L D + + ++ +C G + A VF + + N+F WN+II G +
Sbjct: 227 IHGYIRTKRLKIDVVLGNALIDMYC--KCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMN 284
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QGLEFDQF 124
AI FI ++ I+P +T+ + + GL G + ++ GLE
Sbjct: 285 GRGEEAIAAFI-VMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVE 343
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG-LAKCGEIDESRRLFDKMVS 183
+ ++ + G+L EA + + + NSM++G L + +I + +L +++
Sbjct: 344 HYGCMVDLLGRAGYLKEALELIRAMPMKP-----NSMVLGSLLRACQIHKDTKLGEQVTQ 398
Query: 184 R 184
+
Sbjct: 399 Q 399
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/504 (35%), Positives = 297/504 (58%), Gaps = 14/504 (2%)
Query: 1 MKDLKKIHAHLIKT---GLAKDPIAASRILAFCTSPAGD------INYAYLVFTQIKKPN 51
+ L ++HA+ I P ++ L T+ A ++YA +F I+ P+
Sbjct: 29 ISQLHQLHAYTITNTPLSFHSSPSLLTKFLYTLTTKAKSKSSTSLLHYAKSIFNSIQNPS 88
Query: 52 LFIWNTIIRGFSQSSTPRNAILLFIDML-VTSPIQPQRLTYPSLFKAYAQLGLARDGAQL 110
F +NTIIR + S P A+ F M ++ P+ ++P KA AQLG L
Sbjct: 89 TFCYNTIIRVHTLLSFPIPALHFFTQMRRLSVPLDSH--SFPFTLKACAQLGGVFSARCL 146
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
H +V+K G D ++ N++I+ Y ++A +FDE + DVV++N +I G K G+
Sbjct: 147 HCQVLKFGFLSDLYVMNSLIHGYMVSDMSNDAYKVFDE-SPQRDVVSYNVLIDGFVKAGD 205
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
+ ++R LFD M R++VSWN++I+G + +EA+ELF M + I+P +VS L+A
Sbjct: 206 VVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAIELFDFMMDLEIRPDNVALVSTLSA 265
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA+LG + +G+ IH+++ N +++T + T ++D Y KCGC + AL++F++ K L W
Sbjct: 266 CAQLGELEKGKKIHDYIERNAMKVDTFLSTGLVDFYAKCGCVDIALKIFDSSSDKNLFTW 325
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N+M+ GLAM+GY ++ FS + + +KPD IS + VL C+HSG V++A+ F M
Sbjct: 326 NAMLVGLAMHGYGELLLEYFSRMIEAGVKPDGISILGVLVGCSHSGLVDEARKLFDEMES 385
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
Y + KHY CM D LGRAGL+++ ++I+ MP D +W LL CR HG++E+A+
Sbjct: 386 VYGVPREPKHYGCMADLLGRAGLIKKVMEMIKDMPRGGDMSVWSGLLGGCRIHGDVEIAE 445
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME-ERLLMKEVKIEKEPGCSLIEVDGE 469
+AAK ++EL ++ Y +++N+YA + ++E+ M R L + K G SLI++DG
Sbjct: 446 KAAKHLMELKPDDGGVYSILANVYANAERWEDVMNIRRSLSSNRVVTKIAGFSLIQLDGV 505
Query: 470 VHEFVAGGRLHPKAPEVYLLLNDL 493
HEF+AG LH ++ ++YL+LN +
Sbjct: 506 AHEFIAGDSLHSESDKIYLVLNGI 529
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 288/504 (57%), Gaps = 51/504 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAA---SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
M LK++HA ++T +P +IL +S D+NYA+ VF I+ + F+WNT
Sbjct: 42 MSQLKQLHAFTLRTTYPDEPATLFLYGKILQL-SSSFSDVNYAFRVFDSIENHSSFMWNT 100
Query: 58 IIRGFSQS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR + S A +L+ ML P + T+P + KA A + +G Q+H ++VK
Sbjct: 101 LIRACAHDVSRKEEAFMLYRKMLERGESAPDKHTFPFVLKACAYIFGLSEGKQVHCQIVK 160
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G D +++N +I+ Y +C G +D +R+
Sbjct: 161 HGFSGDVYVNNGLIHFYGSC--------------------------------GCLDLARK 188
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M R+ VSWNSMI VR ++ AL+LFR+MQ ++ +P +TM S+L+ACA LG+
Sbjct: 189 VFDEMPERSLVSWNSMIDALVRVGEYDSALQLFRDMQ-KSFEPDGYTMQSVLSACAGLGS 247
Query: 237 IRQGEWIHNFLVTNC---FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ G W H FL+ NC ++ ++ ++I+MYCKCG A QVF + K L+ WN+M
Sbjct: 248 LSLGTWSHVFLLRNCDVDVAMDVLIKNSLIEMYCKCGSLRMAEQVFQGMRKHDLASWNAM 307
Query: 294 VFGLAMNGYENEAIKLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+ G A +G EA+ F + + N+KP+ ++F+A+L ACNH G VN+ + YF +M
Sbjct: 308 ILGFATHGKAEEAMNCFDCMVKEGKNVKPNSVTFVALLIACNHRGMVNKGRQYFDMMVRE 367
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAK 410
Y I+P+++HY C++D L RAG + EA ++ SMP PDA+IW SLL AC K G ++E+++
Sbjct: 368 YGIEPALEHYGCIIDLLARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 427
Query: 411 QAAKQII-------ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
+ A+ II + N S YVL+S +YA++ ++ + R LM + I KEPGCS
Sbjct: 428 EIARNIIGTMEDNQSSNSNCSGAYVLLSRVYASANRWNDVGIVRKLMSDHGIRKEPGCSS 487
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVY 487
IE++G +EF AG HP+ ++Y
Sbjct: 488 IEINGISNEFFAGDTSHPQTKQIY 511
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/494 (35%), Positives = 296/494 (59%), Gaps = 23/494 (4%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IH H++K G D + +++ + G + A+ VF + ++ + +I G++
Sbjct: 86 QQIHGHVLKLGYEPDLYVHTSLISM-YAQNGRLEDAHKVFDRSSHRDVVSYTALITGYAS 144
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S R+A +F ++ V + ++ ++ YA+ G ++ +L ++K + D+
Sbjct: 145 SGNIRSAQEMFDEIPVKDVV-----SWNAMISGYAETGSYKEALELFKEMMKTNVRPDEG 199
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVD-----TEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
T++ A + R + +D + +V N++I +KCG+++ + LF+
Sbjct: 200 TMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIV--NALIDLYSKCGQVETACGLFE 257
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+ ++ VSWN++I GY +KEAL LF+EM P++ T+VS+L ACA LGAI
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 240 GEWIHNFL------VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
G WIH ++ VTN L T ++IDMY KCG E A QVFN++ K LS WN+M
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRT----SLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAM 373
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+FG AM+G N LFS ++ + ++PD I+F+ +L+AC+HSGK++ + F MT+ Y
Sbjct: 374 IFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYD 433
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
I P ++HY CM+D LG +GL +EA+++I++MP +PD +IW SLL ACR+HGN+E+A+ A
Sbjct: 434 ITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFA 493
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
+ +++++ YVL+SN+YA + +++E + R L+ ++K PGCS IE+D EVHEF
Sbjct: 494 RNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEF 553
Query: 474 VAGGRLHPKAPEVY 487
+ G +LHP+ E+Y
Sbjct: 554 IVGDKLHPRNREIY 567
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 275/522 (52%), Gaps = 61/522 (11%)
Query: 24 SRILAFCT-SPAGD-INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVT 81
S++L FC SP D YA VF I++PN IWNT++RG++ SS P +A+ L++ ++++
Sbjct: 1 SKLLEFCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYV-VMIS 59
Query: 82 SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSE 141
+ P T+P L K+ A+ +G Q+HG V+K G E D ++H ++I MYA G L +
Sbjct: 60 LGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLED 119
Query: 142 ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVK 201
A +FD + DVV++ ++I G A G I ++ +FD++ ++ VSWN+MISGY
Sbjct: 120 AHKVFDR-SSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGS 178
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTA 261
+KEALELF+EM + N++P E TMV++L+ACA+ ++ G +H+++ + F N +V A
Sbjct: 179 YKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNA 238
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
+ID+Y KCG E A +F + K + WN+++ G EA+ LF + S P+
Sbjct: 239 LIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPN 298
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKI---KPSIKHYSCMVDALGRAGLLEEAE 378
++ +++L AC H G ++ + + + K PS++ + ++D + G +E A
Sbjct: 299 DVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAH 356
Query: 379 KLIRSMPS----------------------------------DPDAIIWGSLLSACRKHG 404
++ SM +PD I + LLSAC G
Sbjct: 357 QVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSG 416
Query: 405 NIEMAKQAAKQIIE----LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP- 459
+++ + K + + K E Y M +L S F+EA E ++K + +E +
Sbjct: 417 KLDLGRHIFKSMTQDYDITPKLEH--YGCMIDLLGHSGLFKEAKE---MIKTMPMEPDGV 471
Query: 460 -GCSLIEV-----DGEVHEFVAGG--RLHPKAPEVYLLLNDL 493
CSL++ + E+ E A ++ P+ P Y+LL+++
Sbjct: 472 IWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNI 513
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 342 bits (876), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 176/495 (35%), Positives = 297/495 (60%), Gaps = 15/495 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IHAH++K G D + ++ + +G++N A LVF Q + + +I G++
Sbjct: 149 KQIHAHVLKLGFVSDVFIHTSLINM-YAQSGEMNNAQLVFDQSNFRDAISFTALIAGYAL 207
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A LF +M V + ++ ++ YAQ+G +++ L + K + ++
Sbjct: 208 WGYMDRARQLFDEMPVKDVV-----SWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNE- 261
Query: 125 IHNTIIYMYANCG------FLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+TI+ + + C + R ++ ++ N++I +KCG++ +R LF
Sbjct: 262 --STIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELF 319
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D M+ R+ +SWN MI GY +KEAL LFREM ++P+E T +S+L +CA LGAI
Sbjct: 320 DDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAID 379
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+WIH ++ N ++T + T++ID+Y KCG A QVF+ + K L+ WN+M+ GLA
Sbjct: 380 LGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLA 439
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
M+G ++A +LFS + S ++P+ I+F+ +L+AC H+G V+ + +F+ M + YKI P
Sbjct: 440 MHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKS 499
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CM+D LGRAGL EEAE L+++M PD IWGSLL ACR HG +E+ + A+++ E
Sbjct: 500 QHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFE 559
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ + YVL+SN+YA + ++++ R + + ++K PGC+ IEVD VHEF+ G +
Sbjct: 560 LEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDK 619
Query: 479 LHPKAPEVYLLLNDL 493
+HP++ ++Y +L ++
Sbjct: 620 VHPQSEDIYRMLEEV 634
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 178/537 (33%), Positives = 296/537 (55%), Gaps = 48/537 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ K+IHAH+IKTGL A S+++ F S +GDI+YA +F I++PNLFIWN++I
Sbjct: 42 IRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMI 101
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG S S +P A++ F+ M + S ++P T+P L K+ A+L A +G Q+H V+K G
Sbjct: 102 RGLSMSLSPALALVFFVRM-IYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGF 160
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D FIH ++I MYA G ++ A+L+FD+ + D +++ ++I G A G +D +R+LFD
Sbjct: 161 VSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFR-DAISFTALIAGYALWGYMDRARQLFD 219
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M ++ VSWN+MI+GY + + KEAL LF +M++ N+ P+E T+VS+L+ACA+ A+
Sbjct: 220 EMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDL 279
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G + +++ N +V A+IDMY KCG + A ++F+ + ++ + WN M+ G
Sbjct: 280 GNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTH 339
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY------- 352
EA+ LF + +S ++P I+F+++L +C H G ++ K + + +
Sbjct: 340 MCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSL 399
Query: 353 ------------------------KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD- 387
KIK S+ ++ M+ L G ++A +L M SD
Sbjct: 400 STSLIDLYAKCGNIVAARQVFDGMKIK-SLASWNAMICGLAMHGQADKAFELFSKMSSDG 458
Query: 388 --PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK--NESCGYVLMSNLYAASYQFEEA 443
P+ I + +LSAC+ G +++ +Q +++ K +S Y M +L + FEEA
Sbjct: 459 IEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEA 518
Query: 444 MEERLLMKEVKIEKEPGCSLIEV-----DGEVHEFVAGG--RLHPKAPEVYLLLNDL 493
E L EVK + SL+ E+ E VA L P P Y+LL+++
Sbjct: 519 -ESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNI 574
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 157/354 (44%), Gaps = 66/354 (18%)
Query: 79 LVTSPIQPQRL--TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANC 136
++ S P R+ +PSL K ++ R Q+H ++K GL HNT+ +
Sbjct: 16 VLPSSDPPYRVLQEHPSL-KLLSKCQSIRTFKQIHAHIIKTGL------HNTLFAL---- 64
Query: 137 GFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY 196
++L+ EF V+ + G+I + LF+ + N WNSMI G
Sbjct: 65 -----SKLI------EFSAVS---------RSGDISYAISLFNSIEEPNLFIWNSMIRGL 104
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
++ AL F M ++P+ +T LL +CAKL + +G+ IH ++ F +
Sbjct: 105 SMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDV 164
Query: 257 IVVTAIIDMYCKC-------------------------------GCPERALQVFNTVPKK 285
+ T++I+MY + G +RA Q+F+ +P K
Sbjct: 165 FIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVK 224
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
+ WN+M+ G A G EA+ LF ++ +N+ P+ + ++VL+AC S ++
Sbjct: 225 DVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMR 284
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ + E + ++K + ++D + G L+ A +L M + D I W ++
Sbjct: 285 SWI-EDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDML-ERDVISWNVMIGG 336
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/464 (38%), Positives = 284/464 (61%), Gaps = 8/464 (1%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +IHAH+++ L + S ++ C + + YA LVF Q + PNL ++N++I+G+S
Sbjct: 25 LPQIHAHILRHHLHQSNQILSHFISVCGA-LDKMGYANLVFHQTQNPNLLLFNSMIKGYS 83
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
N++LLF M I P T+ L K+ + G+ + V + F++
Sbjct: 84 LCGPSENSLLLFSQM-KNRGIWPDEFTFAPLLKSCS--GICDNRIGKGVHGVVIVVGFER 140
Query: 124 F--IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
F I II +Y +CG + +A+ +FDE+ + DV+ WN MI G K G+I+ RLF +M
Sbjct: 141 FSSIRIGIIDLYTSCGRMEDAKKVFDEM-LDRDVIVWNMMIRGFCKVGDIEMGFRLFRQM 199
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ VSWNSMI+G ++ + EALELFREM + +P + T+V++L CA+LGA+ GE
Sbjct: 200 RDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGE 259
Query: 242 WIHNFLVTNCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
WIH++ ++ + I V +++D YCKCG E A +VFN +P+K + WN+M+ GL N
Sbjct: 260 WIHSYAESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFN 319
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G LF + + ++P+ +F+ VL+ C H+G V + ++ FT MT +K++P ++H
Sbjct: 320 GKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLEH 379
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ CMVD L R G +EEA L+R+MP P+A++WGSLLSA R G+++ A+ A K++IEL+
Sbjct: 380 FGCMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAECAVKELIELE 439
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
S YVL+SN+YA +++E + R LMKE I K PG S++
Sbjct: 440 PWNSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 483
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 172/431 (39%), Positives = 265/431 (61%), Gaps = 4/431 (0%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
AG ++ A +F ++ ++ W T+I G+ + A++++ ML S + + +
Sbjct: 480 AGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAML-RSGLALNEILVVN 538
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
L A +L DG QLHG VVK+G + FI TII+ YA CG + A L F EV +
Sbjct: 539 LVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQF-EVGAKD 597
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+ +WN+++ G K +D++R++FD M R+ SW++MISGY + + + ALELF +M
Sbjct: 598 HLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMV 657
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
IKP+E TMVS+ +A A LG +++G W H ++ LN + A+IDMY KCG
Sbjct: 658 ASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSIN 717
Query: 274 RALQVFNTVPKKGLSC--WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
ALQ FN + K S WN+++ GLA +G+ + + +FS +Q N+KP+ I+FI VL+A
Sbjct: 718 SALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSA 777
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H+G V + F +M Y ++P IKHY CMVD LGRAGLLEEAE++IRSMP D +
Sbjct: 778 CCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKADIV 837
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IWG+LL+ACR HG++ + ++AA+ + L + G VL+SN+YA + ++E+ R ++
Sbjct: 838 IWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRAIQ 897
Query: 452 EVKIEKEPGCS 462
++E+ PGCS
Sbjct: 898 NQRMERMPGCS 908
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 124/218 (56%), Gaps = 1/218 (0%)
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE 152
+L A + G QLH V+K GL + FI N++I MYA G + +A+L+FD T
Sbjct: 274 ALVSALKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPT- 332
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
+ ++ N M+ G AK G++D +R+LFD M + VS+ +MI G V+N F+EALE+F++M
Sbjct: 333 LNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDM 392
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+ + P++ T+V+++ AC+ G I IH + E +V T ++ YC C
Sbjct: 393 RSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGV 452
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLF 310
A ++F+ +P+ L WN M+ G A G + A +LF
Sbjct: 453 GEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELF 490
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 128/273 (46%), Gaps = 25/273 (9%)
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+ + F SL+N AK G+I+ + L C LN I ++ Y K G + A
Sbjct: 300 LHSNTFIQNSLINMYAKRGSIKDAQ----LLFDACPTLNPISCNIMVCGYAKAGQLDNAR 355
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
++F+ +P KG + +M+ GL N EA+++F ++S + P+ ++ + V+ AC+H G
Sbjct: 356 KLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFG 415
Query: 337 KVNQAKDYFTLMTETYK-----IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
++ + + + + + ++ C+ +G EA +L MP + + +
Sbjct: 416 EILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVG------EARRLFDRMP-EVNLV 468
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELD----KNESCGYVLMSNLYAASYQFEEAMEER 447
W +L+ K G ++MA++ +++ + D GY+LM+ L+ A + +
Sbjct: 469 SWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSG 528
Query: 448 LLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
L + E+ + +L+ G ++ G +LH
Sbjct: 529 LALNEILV-----VNLVSACGRLNAIGDGWQLH 556
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 180/491 (36%), Positives = 296/491 (60%), Gaps = 6/491 (1%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+++++IHA I +GL P A R+L S + I YA LVF +I P++F +N +IRG
Sbjct: 39 QEVRQIHAQFIVSGLLARPPNAGRLLDSYVSMS-QIYYALLVFNRIPSPDVFAYNAMIRG 97
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ + P +++LL+ +L+ + P TY + K + L +G Q+H +V+K G+
Sbjct: 98 LTLGNCPYDSLLLYNKLLLGG-LTPDNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAP 156
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D IH ++I+MYA L+ A + E E +V+A NSMI G G ++++R +FDKM
Sbjct: 157 DTHIHTSLIHMYAKSDCLACAEGVLAECSQE-NVLAINSMISGYMSQGHVEKARAMFDKM 215
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREM---QEQNIKPSEFTMVSLLNACAKLGAIR 238
+++ +W+ MI+GY +N +EAL +FREM ++P+E +VS L+A A LGA+
Sbjct: 216 GAKDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGVQPNESALVSSLSATACLGALD 275
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
QG WIH ++ +++ + T ++DMY KCG + ++F + ++ + W M+ G A
Sbjct: 276 QGRWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYKLFREMQQRDVVTWGVMMSGFA 335
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
M+G + +LF + + +P+ + F+A+L+AC+H+G + YF M + I+PS+
Sbjct: 336 MHGQARKCFQLFDEMVAGGTRPNEVIFVAILSACSHAGYLELGHHYFNQMVTDFGIRPSV 395
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD LGRAG L EAE+LI SMP +P A+IWG+LLSACR H ++ ++A +Q+++
Sbjct: 396 EHYGCMVDLLGRAGQLAEAEELIISMPEEPTAVIWGALLSACRIHKDLRRGRRAFRQLMQ 455
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ Y L +++++ + EEA +KE ++E G S IE++G VHEFV G
Sbjct: 456 LEPLRGDRYKLAGQMFSSAGEKEEADNVTRFIKENELETTRGSSFIEINGVVHEFVVGDA 515
Query: 479 LHPKAPEVYLL 489
H KA E+Y +
Sbjct: 516 DHHKAREMYRM 526
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 290/492 (58%), Gaps = 7/492 (1%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++HAH++ GL + S+++AF S +GDI+ + VF I +P+ ++N++IR +++
Sbjct: 91 QVHAHMLLRGLQPTALVGSKMVAFYAS-SGDIDSSVSVFNGIGEPSSLLFNSMIRAYARY 149
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ + M + T+P + K+ +L G +HG +++ GL+FD ++
Sbjct: 150 GFAERTVATYFSMH-SWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYV 208
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
++I +Y CG +++A +FD + T DV +WN+++ G K G ID + +F++M RN
Sbjct: 209 ATSLIILYGKCGEINDAGKVFDNM-TIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRN 267
Query: 186 TVSWNSMISGYVRNVKFKEALELFREM--QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
VSW +MISGY ++ ++AL LF EM ++ ++P+ T++S+L ACA+L + +G I
Sbjct: 268 IVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQI 327
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK--KGLSCWNSMVFGLAMNG 301
H N V+ A+ MY KCG A F+ + + K L WN+M+ A G
Sbjct: 328 HELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYG 387
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ +A+ F + + ++PD I+F +L+ C+HSG V+ YF M+ TY I P ++HY
Sbjct: 388 HGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHY 447
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+C+ D LGRAG L EA KL+ MP IWGSLL+ACRKH N+EMA+ AA+++ L+
Sbjct: 448 ACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEP 507
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ YVL+SN+YA + +++E + R ++K +K PGCS IE++G+ H F+ G HP
Sbjct: 508 ENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHP 567
Query: 482 KAPEVYLLLNDL 493
+ E+Y+ L L
Sbjct: 568 QGKEIYMFLEAL 579
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/376 (18%), Positives = 155/376 (41%), Gaps = 73/376 (19%)
Query: 80 VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFL 139
+++P P L+Y +F+ L + + G Q+H ++ +GL+ + + ++ YA+
Sbjct: 62 LSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYAS---- 117
Query: 140 SEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRN 199
G+ID S +F+ + +++ +NSMI Y R
Sbjct: 118 ----------------------------SGDIDSSVSVFNGIGEPSSLLFNSMIRAYARY 149
Query: 200 VKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV 259
+ + + M FT +L + +L ++ G+ +H ++ + + V
Sbjct: 150 GFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVA 209
Query: 260 TAIIDMYCKC-------------------------------GCPERALQVFNTVPKKGLS 288
T++I +Y KC GC + AL +F +P + +
Sbjct: 210 TSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIV 269
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
W +M+ G + +G +A+ LF + + S ++P++++ ++VL AC + + +
Sbjct: 270 SWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHE 329
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEA----EKLIRSMPSDPDAIIWGSLLSACRK 402
L + + + + G L +A +KL R ++ + I W ++++A
Sbjct: 330 LACRM-GLNSNASVLIALTAMYAKCGSLVDARNCFDKLNR---NEKNLIAWNTMITAYAS 385
Query: 403 HGNIEMAKQAAKQIIE 418
+G+ A +++I+
Sbjct: 386 YGHGLQAVSTFREMIQ 401
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 192/568 (33%), Positives = 299/568 (52%), Gaps = 73/568 (12%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
LK IHA L++ L +D + IL C G NY+ LVF+Q+K+PN+F+WNT+IRG
Sbjct: 32 LKHIHARLLRLHLDQDNYLLNLILC-CALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLV 90
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+AI L+ M P T P + KA A+ R G ++H +VK G + D
Sbjct: 91 SKDCFDDAIHLYGSMR-GGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG------------------- 164
F+ +++ +Y C +A +FD++ + +VV+W ++I G
Sbjct: 150 FVKTSLLSLYVKCDNFDDALKVFDDIPDK-NVVSWTAIITGYISSGHFREAIGAFKKLLE 208
Query: 165 -------------LAKCGEIDE-------SRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
LA C + + R + D + RN S++ YV+ +
Sbjct: 209 MGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLER 268
Query: 205 ALELFREM-------------------------------QEQNIKPSEFTMVSLLNACAK 233
A +F M Q +N+KP +TMV +L+ACA
Sbjct: 269 ANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACAT 328
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LGA+ G W + + N F N ++ TA+IDMY KCG +A ++F + KK WN+M
Sbjct: 329 LGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAM 388
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ GL+MNG+ LFS ++ ++PD +FI +L C H G VN+ + +F M +
Sbjct: 389 MVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFS 448
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
+ PSI+HY CMVD LGRAGLL EA +LI +MP P+A++WG+LL C+ H + +A+Q
Sbjct: 449 LTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVL 508
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
K++IEL+ S YV +SN+Y+ ++++EEA + R MKE +I+K CS IE+DG VHEF
Sbjct: 509 KKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEF 568
Query: 474 VAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ G + H + ++Y L++LG ++ +G
Sbjct: 569 LVGDKSHWLSEKIYAKLDELGRELKAVG 596
>gi|225452668|ref|XP_002276684.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g28640-like [Vitis vinifera]
Length = 511
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 181/503 (35%), Positives = 293/503 (58%), Gaps = 40/503 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ K IHA I GL + A S++++FC S +G ++YA L+F+QI+ PNLF +NT+I
Sbjct: 17 MRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQIQNPNLFAYNTLI 76
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R +S+SSTP+ A+ F ML + P + T+P + A G Q+H V+K G+
Sbjct: 77 RAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLGKQIHNWVLKNGV 136
Query: 120 -EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D+ + ++ YA C + +AR +LF
Sbjct: 137 ASSDRHVQTALVRFYAECCAMGDAR--------------------------------KLF 164
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D++ + + V WN +++GYVR EAL FR M ++P EF + + L CA+LGA++
Sbjct: 165 DEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQ 224
Query: 239 QGEWIHNFLVTN-CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
QG+WIH ++ E + + TA++DMY KCGC +R+++VF + K+ + W++M+ G
Sbjct: 225 QGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGF 284
Query: 298 AMNGYENEAIKLFSGLQSSN-LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
A++G+ +A++ +Q + L+PD + + V+ AC H+G + + M Y I P
Sbjct: 285 ALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILP 344
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+HYSCMVD L RAG L+EA KLIR MP P A +WG+LLS CR H N+++A+ AA+++
Sbjct: 345 KHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCRTHNNVDLAELAAREL 404
Query: 417 IEL---DKNESCG-YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
+ + D E G YV +SN+Y A+ + E+A R ++ + +I+ +PGCSLIEV+GEV++
Sbjct: 405 LMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQ 464
Query: 473 FVAGGRLHPKAPEVYLLLNDLGL 495
FV+G HP +++ +L+ + L
Sbjct: 465 FVSGDISHPCLAQIHEMLDLVSL 487
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 181/512 (35%), Positives = 299/512 (58%), Gaps = 47/512 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K++++ + K+GL P S+I++F + SP G + YA +F N F+ NT+I
Sbjct: 125 VKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTAMDNPFVCNTMI 184
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA-------------QLGLARD 106
R +++S P AI L+ + + I+ TYP KA A QL +A
Sbjct: 185 RAYAKSVFPIKAIYLY-NFMHRKDIKSDHFTYPFGLKACARVLWCNEGDIKCTQLDIACK 243
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD---------------- 150
GA++H R+ + GL+ D FI N+++Y+Y+ CGFL AR +FDE+
Sbjct: 244 GAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARCVFDEMTEKTITSWNVMISAYDQ 303
Query: 151 -TEFD-------------VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY 196
+FD VV+WN +I + G+I++++ +F +M R+ VSWNSMI+GY
Sbjct: 304 INDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKVVFQEMPERDAVSWNSMIAGY 363
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
V+ + AL LFREM+ N++ ++ T++S+L ACA+ GA+ G IH L +++
Sbjct: 364 VQIKDYARALALFREMEIANVEATDITLISVLGACAETGALEIGRKIHLSLKQREYKIEG 423
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
+ A++DMY KCG A +VF+ + K +SCWN+M+ LA++GY EA++LFS ++ S
Sbjct: 424 YLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMIVSLAVHGYCEEALRLFSTMEMS 483
Query: 317 --NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
+P+ ++FI VL AC+H G V++ + +F M YKI P IKHY CMVD L R GLL
Sbjct: 484 VDGARPNRVTFIGVLIACSHKGLVDEGRTFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLL 543
Query: 375 EEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLY 434
+EA +I++MP + ++++W +LL ACR H ++++A+++ +Q+ +++ YVL+SN+Y
Sbjct: 544 KEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIY 603
Query: 435 AASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
A + ++ + R M + K+PG S I +
Sbjct: 604 AEAQRWNDVERVRSEMIGSGVPKKPGSSHIGI 635
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 190/555 (34%), Positives = 293/555 (52%), Gaps = 67/555 (12%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+K++HA +IK L D A ++++ S +N A VF QI+ PN+ ++NT+IR
Sbjct: 39 IKEVHAQIIKRNLHNDLYVAPKLIS-AFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRAHV 97
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
Q+S A F DM + + TYP L KA G +H V K G D
Sbjct: 98 QNSQSLKAFATFFDM-QKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDL 156
Query: 124 FIHNTIIYMYANCGFLS---------------------------------EARLMFDEVD 150
F+ N++I Y+ CG L AR +FDE+
Sbjct: 157 FVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEM- 215
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKF-------- 202
E D V+WN+++ G K GE+ ++ LF+KM RN VSW++M+SGY +
Sbjct: 216 AERDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFD 275
Query: 203 -----------------------KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
KEA L+ +M+ +KP + T++S+L ACA+ G +
Sbjct: 276 KMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVL 335
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ +H + + + V A++DMY KCG ++AL +FN + + L WN M+ GLAM
Sbjct: 336 GKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAM 395
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G+ +AI+LFS +Q KPD ++ IA+L AC H+G V+Q YF M + I P I+
Sbjct: 396 HGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIE 455
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CM+D LGR G LEEA +L++SMP +P+ +IWG+LL ACR H + +A++ ++I L
Sbjct: 456 HYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVLDRLITL 515
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
++++ Y ++SN++AA+ + RL MK ++K G S IE+D EVHEF +
Sbjct: 516 EQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIELDDEVHEFTVFDKS 575
Query: 480 HPKAPEVYLLLNDLG 494
HP+ ++Y +L LG
Sbjct: 576 HPETDKIYQILVKLG 590
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 305/538 (56%), Gaps = 40/538 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K LK +H+ + ++P +++ + G+ A VF I + N+ +N +IR
Sbjct: 48 IKTLKNVHSKVFNLSFHENPSLGIKLMR-AYAARGEPGLARNVFDVIPERNVIFYNVMIR 106
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ + +A+L+F DM V+ P TYP + KA + R G QLHG V K GL+
Sbjct: 107 SYMNNHLYDDALLVFRDM-VSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLD 165
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK----------CGE 170
+ F+ N +I +Y CG L EAR + DE+ ++ DVV+WNSM+ G A+ C E
Sbjct: 166 LNLFVGNGLIALYGKCGCLPEARCVLDEMQSK-DVVSWNSMVAGYAQNMQFDDALDICRE 224
Query: 171 IDESRR---------------------------LFDKMVSRNTVSWNSMISGYVRNVKFK 203
+D R+ +F + ++ VSWN MIS Y++N
Sbjct: 225 MDGVRQKPDACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPG 284
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
++++L+ +M + ++P T S+L AC L A+ G IH ++ N ++ ++I
Sbjct: 285 KSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLI 344
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY +CGC E A +VF+ + + ++ W S++ M G A+ LF+ +Q+S PD I
Sbjct: 345 DMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSI 404
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F+A+L+AC+HSG +N+ K YF MT+ YKI P I+H++C+VD LGR+G ++EA +I+
Sbjct: 405 AFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQ 464
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
MP P+ +WG+LLS+CR + N+++ AA ++++L ES YVL+SN+YA + ++ E
Sbjct: 465 MPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEV 524
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R LMK +I K PG S +E++ +VH F+AG HP++ E+Y L+ L ++E+G
Sbjct: 525 TAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELG 582
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 340 bits (873), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 283/467 (60%), Gaps = 1/467 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A + Q + N+ W ++I G+S++ P +A+ F ML + ++P +
Sbjct: 183 GLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCML-SDGVEPDEVAVIGA 241
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A ++L G LH V K+ ++ + T+I MYA CG +++A+ +FD V
Sbjct: 242 LSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQK 301
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
WN +I G K G +D +R LFD+M +R+ +++NSMI+GY+ + + ++AL+LF +++
Sbjct: 302 PEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRR 361
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
++ FT+VSLL ACA LGA+ QG +H + E + +VTA++DMY KCG +
Sbjct: 362 HGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDE 421
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VF+ + ++ + W++M+ GLA NG +A++ F ++ +P +++IAVLTAC+H
Sbjct: 422 ATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSH 481
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
S +N+ + +F M +K+ P I+HY CM+D L R+GLL+EA L+++MP P+A+IW
Sbjct: 482 SSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWA 541
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
S+LSACR H NI++A+ AA+ +++L E YV + N+Y S Q+ EA R+LM+E
Sbjct: 542 SILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQG 601
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++K G S I V G+VH+FV + HP E+ ++ ++ ++ G
Sbjct: 602 VKKTAGYSSITVAGQVHKFVVNDQSHPWTLEIITMMEEIARRLKSAG 648
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 204/437 (46%), Gaps = 45/437 (10%)
Query: 1 MKDLKKIHAHLIKTG-LAKDPIAASRI--LAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
++ ++HA L +G +A P A + L C S + Y +F ++ P F+ +T
Sbjct: 12 VRQASQLHAILTTSGRIAHRPSAEHLLNSLTNCLSAPRHLRYVLSLFDRLPHPTTFLHDT 71
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK---AYAQLGLARDGAQLHGRV 114
+R Q+S + +L + + ++ T+ +F+ A A GL R LH
Sbjct: 72 ALRACLQASAGADHPVLILRRMRRGGVRMSAFTFHFVFRCCAAGAGAGLCR---MLHAAC 128
Query: 115 VKQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
++ L + + N +I+MYA+ G +AR FDEV + D V W ++I GL + G +DE
Sbjct: 129 LRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVK-DAVVWATVIGGLVRWGLLDE 187
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+RRL + RN VSW S+I+GY R + +A+ F M ++P E ++ L+AC+K
Sbjct: 188 ARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSK 247
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK--------- 284
L + G +H + ++ +V +IDMY KCG +A VF+ V +
Sbjct: 248 LKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNV 307
Query: 285 -----------------------KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
+ + +NSM+ G +G +A++LF L+ ++ D
Sbjct: 308 IIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRAD 367
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
+ +++LTAC G + Q + + E ++ + + +VD + G ++EA +
Sbjct: 368 NFTVVSLLTACASLGALPQGRALHASI-EQRIVEEDVYLVTALVDMYMKCGRVDEATAVF 426
Query: 382 RSMPSDPDAIIWGSLLS 398
M + D W ++++
Sbjct: 427 HRM-GERDVHTWSAMIA 442
>gi|296087773|emb|CBI35029.3| unnamed protein product [Vitis vinifera]
Length = 1596
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 181/503 (35%), Positives = 294/503 (58%), Gaps = 40/503 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ K IHA I GL + A S++++FC S +G ++YA L+F+QI+ PNLF +NT+I
Sbjct: 17 MRQFKAIHALFIVNGLHLNNYAISKLISFCALSNSGSLSYASLIFSQIQNPNLFAYNTLI 76
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R +S+SSTP+ A+ F ML + P + T+P + A G Q+H V+K G+
Sbjct: 77 RAYSRSSTPQLALHYFQLMLDDENVGPDQHTFPFIISACTNSLWMLLGKQIHNWVLKNGV 136
Query: 120 -EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D+ + ++ YA C + +AR +LF
Sbjct: 137 ASSDRHVQTALVRFYAECCAMGDAR--------------------------------KLF 164
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D++ + + V WN +++GYVR EAL FR M ++P EF + + L CA+LGA++
Sbjct: 165 DEIPNLDVVQWNVLLNGYVRRGLAPEALNAFRNMLVSGVEPDEFCLTTALKGCAQLGALQ 224
Query: 239 QGEWIHNFLVTNCF-ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
QG+WIH ++ + E + + TA++DMY KCGC +R+++VF + K+ + W++M+ G
Sbjct: 225 QGKWIHEYVTKRKWLEADVFIGTALVDMYAKCGCIDRSVEVFEGMTKRNVFSWSAMIGGF 284
Query: 298 AMNGYENEAIKLFSGLQSSN-LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
A++G+ +A++ +Q + L+PD + + V+ AC H+G + + M Y I P
Sbjct: 285 ALHGHVRKAMQCLERMQVEDGLRPDGVVLLGVIMACAHAGLQEEGQFLLENMEARYGILP 344
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+HYSCMVD L RAG L+EA KLIR MP P A +WG+LLS CR H N+++A+ AA+++
Sbjct: 345 KHEHYSCMVDLLCRAGQLDEALKLIRRMPMKPRAAVWGALLSGCRTHNNVDLAELAAREL 404
Query: 417 IEL---DKNESCG-YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
+ + D E G YV +SN+Y A+ + E+A R ++ + +I+ +PGCSLIEV+GEV++
Sbjct: 405 LMVGNGDGTEEDGAYVQLSNIYLAAQKCEDACRIRRMIGDKRIKTKPGCSLIEVEGEVNQ 464
Query: 473 FVAGGRLHPKAPEVYLLLNDLGL 495
FV+G HP +++ +L+ + L
Sbjct: 465 FVSGDISHPCLAQIHEMLDLVSL 487
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 174/511 (34%), Positives = 303/511 (59%), Gaps = 13/511 (2%)
Query: 1 MKDLK---KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
++DLK +IH+ + ++ D S ++ S G + YA VF ++ + WN+
Sbjct: 164 LQDLKLGSQIHSLVYRSNYLSDVYMGSALVDM-YSKCGRVEYAQSVFDEMTVRSRVSWNS 222
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK- 116
+I + Q+ A+ +F++M + ++P +T S+ A A + ++G Q+H RVVK
Sbjct: 223 LITCYEQNGPVDEALKIFVEM-IKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKC 281
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
D + N ++ MYA C ++EAR++FD + VV+ SM+ G AK ++ +R
Sbjct: 282 DEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIR-SVVSETSMVSGYAKASKVKVARY 340
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F M+ ++ ++WN++I+G +N + +EAL LFR ++ +++ P+ +T +LLNACA L
Sbjct: 341 MFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLAD 400
Query: 237 IRQGEWIHNFLVTNCFEL------NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
++ G H+ ++ + F + V ++IDMY KCG E +VF + +K W
Sbjct: 401 LQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSW 460
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N+M+ G A NG+ N+A+++F + S PD+++ I VL AC+H+G +++ + YF MT
Sbjct: 461 NAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTA 520
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
+ + P HY+CMVD LGRAG LEEA+ LI M PDAI+WGSLL+AC+ H NI++ +
Sbjct: 521 QHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGE 580
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
K+++E+D S YVL+SN+YA + ++ + R LM++ + K+PGCS IE+ GE+
Sbjct: 581 YVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWIEIQGEL 640
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ F+ + H + E+Y++L + +++ G
Sbjct: 641 NVFMVKDKRHARKKEIYMVLRTILQQMKQAG 671
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 181/367 (49%), Gaps = 41/367 (11%)
Query: 73 LLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYM 132
LLF+D +SP + L A+ ARD +++H ++K + FI N +I +
Sbjct: 14 LLFLD---SSP-------FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDV 63
Query: 133 YANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
Y CG + AR +FD + E ++ +WNS+I K G +D++ +F+KM + SWNSM
Sbjct: 64 YGKCGCVDVARKLFDRM-LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSM 122
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
ISG+ ++ +F EAL F +M +E++ S L+ACA L ++ G IH+ + + +
Sbjct: 123 ISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNY 182
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
+ + +A++DMY KCG E A VF+ + + WNS++ NG +EA+K+F
Sbjct: 183 LSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVE 242
Query: 313 LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAG 372
+ ++PD ++ +V++AC + + + + + + + + + ++D +
Sbjct: 243 MIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCN 302
Query: 373 LLEEAEKL-----IRSMPSDP-------------------------DAIIWGSLLSACRK 402
+ EA + IRS+ S+ D I W +L++ C +
Sbjct: 303 RINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQ 362
Query: 403 HGNIEMA 409
+G E A
Sbjct: 363 NGENEEA 369
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 204/459 (44%), Gaps = 78/459 (16%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+D ++HA +IK+ A + +R++ G ++ A +F ++ + N+F WN+II
Sbjct: 36 RDTSRVHACIIKSPFASETFIQNRLIDV-YGKCGCVDVARKLFDRMLERNIFSWNSIICA 94
Query: 62 FSQSSTPRNAILLFIDM----------LVTSPIQPQRL--------------------TY 91
F++S +A+ +F M +++ Q R ++
Sbjct: 95 FTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSF 154
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
S A A L + G+Q+H V + D ++ + ++ MY+ CG + A+ +FDE+ T
Sbjct: 155 GSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEM-T 213
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
V+WNS+I + G +D EAL++F E
Sbjct: 214 VRSRVSWNSLITCYEQNGPVD-------------------------------EALKIFVE 242
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT-NCFELNTIVVTAIIDMYCKCG 270
M + ++P E T+ S+++ACA + AI++G+ IH +V + F + I+ A++DMY KC
Sbjct: 243 MIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCN 302
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
A +F+ +P + + SMV G A A +FS + + D I++ A++
Sbjct: 303 RINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNM----MVKDVITWNALIA 358
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA--------LGRAGLLEEAEKLIR 382
C +G+ +A F L+ + P+ + +++A LGR + R
Sbjct: 359 GCTQNGENEEALILFRLLKRE-SVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFR 417
Query: 383 -SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
D D + SL+ K G++E + + ++E D
Sbjct: 418 FQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKD 456
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 287/487 (58%), Gaps = 3/487 (0%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+HA IK G+ + IL + I A VF I + WN++I G+S+
Sbjct: 159 VHAQAIKLGMGPHACVQNAILTAYVA-CRLILSARQVFDDISDRTIVSWNSMIAGYSKMG 217
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
AILLF +ML ++ T SL A ++ G +H +V G+E D +
Sbjct: 218 FCDEAILLFQEMLQLG-VEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVT 276
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N +I MYA CG L A+ +FD++ + DVV+W SM+ A G ++ + ++F+ M +N
Sbjct: 277 NALIDMYAKCGHLQFAKHVFDQM-LDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNV 335
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSWNS+I V+ ++ EA+ELF M + P + T+VS+L+ C+ G + G+ H +
Sbjct: 336 VSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCY 395
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ N ++ + ++IDMY KCG + A+ +F +P+K + WN ++ LA++G+ EA
Sbjct: 396 ICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEA 455
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
I++F +Q+S L PD I+F +L+AC+HSG V+ + YF +M T++I P ++HY+CMVD
Sbjct: 456 IEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVD 515
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR G L EA LI+ MP PD ++WG+LL ACR +GN+E+AKQ KQ++EL + S
Sbjct: 516 LLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGL 575
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
YVL+SN+Y+ S ++++ + R +M + I+K S IE+DG ++F+ + H + +
Sbjct: 576 YVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDGCCYQFMVDDKRHCASTGI 635
Query: 487 YLLLNDL 493
Y +L+ L
Sbjct: 636 YSILDQL 642
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/447 (28%), Positives = 218/447 (48%), Gaps = 67/447 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
MK LK +HA +I GLA + ++L+ C GD+ YA+L+F QI +PN F++N +IR
Sbjct: 52 MKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQE-GDLRYAHLLFDQIPQPNKFMYNHLIR 110
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+S S+ P ++LLF M+ P+ P + T+P + KA A + +H + +K G+
Sbjct: 111 GYSNSNDPMKSLLLFRQMVSAGPM-PNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMG 169
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N I+ Y C + AR +FD++ ++ +V+WNSMI G +K G D
Sbjct: 170 PHACVQNAILTAYVACRLILSARQVFDDI-SDRTIVSWNSMIAGYSKMGFCD-------- 220
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
EA+ LF+EM + ++ FT+VSLL+A +K + G
Sbjct: 221 -----------------------EAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLG 257
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKC------------------------------- 269
++H ++V E+++IV A+IDMY KC
Sbjct: 258 RFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQ 317
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G E A+Q+FN +P K + WNS++ L G EA++LF + S + PD + +++L
Sbjct: 318 GLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSIL 377
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
+ C+++G + K + + I S+ + ++D + G L+ A + MP + +
Sbjct: 378 SCCSNTGDLALGKQAHCYICDNI-ITVSVTLCNSLIDMYAKCGALQTAIDIFFGMP-EKN 435
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ W ++ A HG E A + K +
Sbjct: 436 VVSWNVIIGALALHGFGEEAIEMFKSM 462
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 177/484 (36%), Positives = 292/484 (60%), Gaps = 8/484 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ L++ ++ GL +D I +R + + ++ G +YAY VF +P++F +N +I
Sbjct: 43 LSHLQQTQGFMLTRGLDQDDILLARFI-YTSASLGLSSYAYSVFISNHRPSIFFYNNVIW 101
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S SS P AI LF + + + P ++P + KA L G Q+H + + GL+
Sbjct: 102 ALS-SSNPTRAISLF-NAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQIHCQAIVSGLD 159
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ +++ MY++C LS AR +FD + + WN+M+ G AK G + +R LF+
Sbjct: 160 SHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPL-WNAMLAGYAKVGNMSNARNLFEC 218
Query: 181 MV--SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
M R+ VSW ++ISGY + EA+ LFR M QN++P E ++++L+ACA LGA++
Sbjct: 219 MPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAILAVLSACADLGALQ 278
Query: 239 QGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
GEWIHN++ + +L V ++IDMY K G +A Q+F + K + W +++ G
Sbjct: 279 LGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHKTIITWTTVISG 338
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA++G+ EA+ +FS ++ + +KP+ ++ IAVL+AC+H G V ++ FT M Y I+P
Sbjct: 339 LALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGIEP 398
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
I+HY CM+D LGRAG L+EA +L+R MPS+ +A +WGSLLSA ++G+ +A +A + +
Sbjct: 399 KIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRYGDAALAAEALRHL 458
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
L+ + Y L+SN YAA ++EA R +M++ EK PG S +E++ V+EF+AG
Sbjct: 459 SVLEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVSFVELNNRVYEFIAG 518
Query: 477 GRLH 480
+L+
Sbjct: 519 DKLN 522
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/493 (36%), Positives = 293/493 (59%), Gaps = 6/493 (1%)
Query: 1 MKDLKKIHAHLIKTGL--AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTI 58
++ LK+IH + GL +K A ++L T ++ A VF I+ P++ W +
Sbjct: 16 LEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVD-AQKVFNHIQNPDIVSWTCL 74
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
I + +S P A +F L S ++P A +G +HG V +
Sbjct: 75 ISLYLHTSQPCKAFSIF-SHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFE 133
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L D + N +I MY+ G + A +F ++ + DV +W S++ G KC +I+ +RR+F
Sbjct: 134 LGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIK-DVSSWTSLLNGFIKCNDIEAARRIF 192
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAI 237
D+M RN+VSW +MI+GYV+ LELF+EM+ E P+ T+V++L+ CA +GA
Sbjct: 193 DEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAF 252
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G +H ++ +L+ V A++DMY K G AL++F +PK+ + W +M+ GL
Sbjct: 253 DLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGL 312
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A++G A++ FS + S + P+ ++ ++VL+AC+H+G V + + F M + + IKP
Sbjct: 313 ALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPK 372
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY CMVD LGRAGLL EA++LI MP PD++IW SLLSAC HGN+ +A+ A K II
Sbjct: 373 IQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMII 432
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
EL+ ++ Y+L+ N+Y ++ ++E+A++ R M++ +++K+PGCS +EV+G VHEF+A
Sbjct: 433 ELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLAED 492
Query: 478 RLHPKAPEVYLLL 490
+H +VY +L
Sbjct: 493 AVHCIRADVYTVL 505
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/502 (33%), Positives = 293/502 (58%), Gaps = 3/502 (0%)
Query: 2 KDLKKIHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K++++IHA L G L D + + A S ++YA + + KP LF N++IR
Sbjct: 28 KEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQILDRSDKPTLFALNSMIR 87
Query: 61 GFSQSSTPRNAILLFIDMLVT-SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+S P + + +L + + ++P T L +A LG+ G Q+HG +++G
Sbjct: 88 AHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGF 147
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D + +I +YA G L +F+ V D V +M+ A+CG++ +R+LF+
Sbjct: 148 DNDPHVQTGLISLYAELGCLDSCHKVFNSVSYP-DFVCRTAMVTACARCGDVAFARKLFE 206
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M ++ ++WN+MISGY + + +EAL LF MQ + +K + +M+S+L+AC +LGA+ Q
Sbjct: 207 GMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQ 266
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G W H+++ N ++ + T ++D+Y KCG ++A++VF + +K + W+S + GLAM
Sbjct: 267 GRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAM 326
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG+ + +KLFS ++ + P+ ++F++VL C+ G V++ + +F M + I+P +
Sbjct: 327 NGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLD 386
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY C+VD RAG LE+A +I+ MP A +W SLL A R + N+E+ A+K+++EL
Sbjct: 387 HYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLEL 446
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ + YVL+SN+YA S ++ R MK + K+PGCS++EV+GEVHEF G +
Sbjct: 447 ETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKS 506
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HPK E+ + D+ ++ G
Sbjct: 507 HPKYNEIDAVWKDISRRLRLAG 528
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 224/409 (54%), Gaps = 32/409 (7%)
Query: 85 QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL 144
+P +T+ S+ A G +G +HG V+K G+ + + N ++ +Y
Sbjct: 634 RPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYG---------- 683
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
K G++ S +LF+ + +N VSWN+MI +++N +E
Sbjct: 684 ----------------------KTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEE 721
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
L F + +KP + T +++L C +G +R + IH ++ F NT + TA++D
Sbjct: 722 GLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLD 781
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
+Y K G E + VF + W +M+ A +GY +AIK F + L PD+++
Sbjct: 782 LYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVT 841
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
F +L AC+HSG V + + YF M++ Y+I+P + HYSCMVD +GR+GLL++A LI+ M
Sbjct: 842 FTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEM 901
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
P +P + +WG+LL ACR + + ++ +AAK++ EL+ + Y+++SN+Y+AS +++A
Sbjct: 902 PMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDAS 961
Query: 445 EERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
R LMK+ + + G S IE ++H+FV G HP++ ++ L ++
Sbjct: 962 RIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEI 1010
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 8/249 (3%)
Query: 161 MIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVK--FKEALELFREM--QEQN 216
++ L CG+ + + K+ +R + + + ++ + + E+ M E
Sbjct: 573 IVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGRGYLGKCFEVLSRMMRSEVG 632
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+P+E T +S+++AC G +G IH ++ + VV A++++Y K G +
Sbjct: 633 FRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSC 692
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
++F + K L WN+M+ NG E + F+ + LKPD +F+AVL C G
Sbjct: 693 KLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIG 752
Query: 337 KVNQAKDYFTL-MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
V ++ L M + I + ++D + G LE++ + + S PD++ W +
Sbjct: 753 VVRLSQGIHGLIMFCGFNANTCIT--TALLDLYAKLGRLEDSSTVFLEITS-PDSMAWTA 809
Query: 396 LLSACRKHG 404
+L+A HG
Sbjct: 810 MLAAYATHG 818
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 34/236 (14%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH ++K+G+ ++ + L GD+ + +F + NL WNT+I Q+
Sbjct: 659 IHGLVMKSGVLEE-VKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNG 717
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
L + +M ++P + T+ ++ + +G+ R +HG ++ G + I
Sbjct: 718 LAEEG-LAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCIT 776
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
++ +YA G L ++ +F E+ T D +AW +M+ A
Sbjct: 777 TALLDLYAKLGRLEDSSTVFLEI-TSPDSMAWTAMLAAYA-------------------- 815
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
GY R +A++ F M + P T LLNAC+ G + +G +
Sbjct: 816 ------THGYGR-----DAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRY 860
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/515 (33%), Positives = 296/515 (57%), Gaps = 35/515 (6%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRN 70
+IKT +D ++ ++ C++ + IN A F ++ PN+ ++N +IRG
Sbjct: 1 MIKTNTTQDCFLVNQFISACSNLSC-INLAASAFANVQNPNVLVFNALIRGCVHCCYSEQ 59
Query: 71 AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTII 130
A++ ++ ML + + P ++ SL KA L + G +HG V K G + F+ T+I
Sbjct: 60 ALVHYMHML-RNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLI 118
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
Y+ G + +R +FD++ E DV AW +MI + G++ + RLFD+M +N +WN
Sbjct: 119 EFYSTFGDVGGSRRVFDDM-PERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWN 177
Query: 191 SMISGY-------------------------------VRNVKFKEALELFREMQEQNIKP 219
+MI GY RN ++KE + LF ++ ++ + P
Sbjct: 178 AMIDGYGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIP 237
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
E TM ++++ACA LGA+ G+ +H +LV F+L+ + +++IDMY KCG + AL VF
Sbjct: 238 DEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVF 297
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+ K L CWN ++ GLA +GY EA+++F ++ ++P+ ++FI++LTAC H+G +
Sbjct: 298 YKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIE 357
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ + +F M + Y I P ++HY CMVD L +AGLLE+A ++IR+M +P++ IWG+LL+
Sbjct: 358 EGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNG 417
Query: 400 CRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE- 458
C+ H N+E+A A + ++ L+ + S Y L+ N+YA ++ E + R MK++ +EK
Sbjct: 418 CKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRC 477
Query: 459 PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
PG S +E++ VH F A HP +++LLL +L
Sbjct: 478 PGSSWVEINKTVHLFAASDTYHPSYSQLHLLLAEL 512
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/504 (36%), Positives = 291/504 (57%), Gaps = 45/504 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAAS--RILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNT 57
M ++HA ++K+G ++ F SP+GD+NYA + + PN F +NT
Sbjct: 6 MTQAMQLHARILKSGAYDSNHGQDFHKLFTFSALSPSGDLNYARHILRTLHTPNSFYYNT 65
Query: 58 IIRGFSQSSTPRNAILLFI------DMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLH 111
+IR +S S+ P A LF+ D V P +P TYP + KA ++ G AR G Q+H
Sbjct: 66 MIRAYSDSTDPTRAFTLFLYMQNPDDASVAVP-RPDHFTYPFVLKACSKSGHARFGKQIH 124
Query: 112 GRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
G V K G+ D++I+N +I++Y+ GE
Sbjct: 125 GLVFKSGVGSDRYINNALIHLYS--------------------------------VSGEP 152
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
+ + ++FDKM R+ VSW S+I G+V N + EA+ LF M E I+P+E T+ S+L AC
Sbjct: 153 NLAYKVFDKMPDRDVVSWTSIIDGFVDNDRPIEAIRLFTHMIENGIEPNEVTVASVLRAC 212
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A GA+ GE IH+F+ F N V TA+IDMY KCGC + AL+VF+ +K + W
Sbjct: 213 ADTGALNTGERIHSFVKEKNFSSNANVSTALIDMYAKCGCIDGALEVFDETLEKDVYVWT 272
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+++ GLA +G +AI+ F ++ S++K D + AVL+A ++G V++ +F + +
Sbjct: 273 AIIAGLASHGLCMKAIEFFENMKKSDVKMDERAITAVLSAYRNAGLVSEGLLFFRRL-KK 331
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+KIKP+I+HY C+VD L RAG L++AE+ IR MP +PDA++W +L+ C+ G++E +++
Sbjct: 332 HKIKPTIQHYGCVVDMLTRAGRLKDAEEFIRKMPIEPDAVLWRTLIWGCKILGDVERSER 391
Query: 412 AAK--QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGE 469
+ +++ +D ++ YVL+ N+YAA+ ++EE + R LM + + K P CS IE+DG
Sbjct: 392 LVRELELLNMDSRDTGSYVLLENVYAATGKWEEKAKTRELMYQRGLMKPPACSRIEIDGV 451
Query: 470 VHEFVAGGRLHPKAPEVYLLLNDL 493
VHEF AG H +A VY L D+
Sbjct: 452 VHEFTAGDSRHDEATAVYEKLEDV 475
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/493 (36%), Positives = 292/493 (59%), Gaps = 6/493 (1%)
Query: 1 MKDLKKIHAHLIKTGL--AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTI 58
++ LK+IH + GL +K A ++L T ++ A VF I+ P++ W +
Sbjct: 267 LEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVD-AQKVFNHIQNPDIVSWTCL 325
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
I + +S P A +F L S ++P A +G +HG V +
Sbjct: 326 ISLYLHTSQPCKAFSIF-SHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFE 384
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L D + N +I MY+ G + A +F ++ + DV +W S++ G KC +I+ +RR+F
Sbjct: 385 LGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIK-DVSSWTSLLNGFIKCNDIEAARRIF 443
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLLNACAKLGAI 237
D+M RN+VSW +MI+GYV+ LELF+EM+ + P+ T+V++L+ CA +GA
Sbjct: 444 DEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAF 503
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G +H ++ +L+ V A++DMY K G AL++F +PK+ + W +M+ GL
Sbjct: 504 DLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGL 563
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A++G A++ FS + S P+ ++ ++VL+AC+H+G V + + F M + + IKP
Sbjct: 564 ALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPK 623
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY CMVD LGRAGLL EA++LI MP PD++IW SLLSAC HGN+ +A+ A K II
Sbjct: 624 IQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMII 683
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
EL+ ++ Y+L+ N+Y ++ ++E+A++ R M++ +++K+PGCS +EV+G VHEF+A
Sbjct: 684 ELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCSWVEVNGVVHEFLAED 743
Query: 478 RLHPKAPEVYLLL 490
+H +VY +L
Sbjct: 744 AVHCIRADVYTVL 756
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 191/568 (33%), Positives = 299/568 (52%), Gaps = 73/568 (12%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
LK IHA L++ L +D + IL C G NY+ LVF+Q+K+PN+F+WNT+IRG
Sbjct: 32 LKHIHARLLRLHLDQDNYLLNLILC-CALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLV 90
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+AI L+ M P T P + KA A+ R G ++H +VK G + D
Sbjct: 91 SKDCFDDAIHLYGSMR-GGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG------------------- 164
F+ +++ +Y C +A +FD++ + +VV+W ++I G
Sbjct: 150 FVKTSLLSLYVKCDNFDDALKVFDDIPDK-NVVSWTAIITGYISSGHFREAIGAFKKLLE 208
Query: 165 -------------LAKCGEIDE-------SRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
LA C + + R + D + RN S++ YV+ +
Sbjct: 209 MGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLER 268
Query: 205 ALELFREM-------------------------------QEQNIKPSEFTMVSLLNACAK 233
A +F M Q +N+KP +TMV +L+ACA
Sbjct: 269 ANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACAT 328
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LGA+ G W + + N F N ++ TA+IDMY KCG +A ++F + +K WN+M
Sbjct: 329 LGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAM 388
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ GL+MNG+ LFS ++ ++PD +FI +L C H G VN+ + +F M +
Sbjct: 389 MVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFS 448
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
+ PSI+HY CMVD LGRAGLL EA +LI +MP P+A++WG+LL C+ H + +A+Q
Sbjct: 449 LTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVL 508
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
K++IEL+ S YV +SN+Y+ ++++EEA + R MKE +I+K CS IE+DG VHEF
Sbjct: 509 KKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEF 568
Query: 474 VAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ G + H + ++Y L++LG ++ +G
Sbjct: 569 LVGDKSHWLSEKIYAKLDELGRELKAVG 596
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 180/504 (35%), Positives = 295/504 (58%), Gaps = 39/504 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAF----CTSPAGDINYAYLVFTQIKKP-NLFIWNTI 58
L++IHA I+ G++ + L F SP ++YA+ VF++I+KP N+FIWNT+
Sbjct: 33 LRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPP-PMSYAHKVFSKIEKPINVFIWNTL 91
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IRG+++ +A L+ +M V+ ++P TYP L KA + R G +H V++ G
Sbjct: 92 IRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 151
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
++ N+++++YANC G++ + ++F
Sbjct: 152 FGSLIYVQNSLLHLYANC--------------------------------GDVASAYKVF 179
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
DKM ++ V+WNS+I+G+ N K +EAL L+ EM + IKP FT+VSLL+ACAK+GA+
Sbjct: 180 DKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT 239
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+ +H +++ N ++D+Y +CG E A +F+ + K W S++ GLA
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 299 MNGYENEAIKLFSGLQSS-NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
+NG+ EAI+LF ++S+ L P I+F+ +L AC+H G V + +YF M E YKI+P
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 359
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+H+ CMVD L RAG +++A + I+SMP P+ +IW +LL AC HG+ ++A+ A QI+
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQIL 419
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+L+ N S YVL+SN+YA+ ++ + + R M ++K PG SL+EV VHEF+ G
Sbjct: 420 QLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGD 479
Query: 478 RLHPKAPEVYLLLNDLGLLIQEMG 501
+ HP++ +Y L ++ ++ G
Sbjct: 480 KSHPQSDAIYAKLKEMTGRLRSEG 503
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 289/507 (57%), Gaps = 12/507 (2%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+ ++HA ++ G+ +D R L + +G ++ A + + P + + I
Sbjct: 44 RRASELHAAAVRAGVDQDKAVDFR-LQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHA 102
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
S A+ L +ML++ + P T + A L + R LHG VK L
Sbjct: 103 HSSRGLHHAALALLSEMLLSHGLLPTAHTLSASLPACGGLAVGR---ALHGYAVKLALSG 159
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ ++ ++ MYA G + AR++FD + + VV+ +M+ AK G +D++R LFD +
Sbjct: 160 EPYVATALLGMYARAGDAAAARVLFDGMQPDPHVVSVTAMLTCYAKMGLLDDARSLFDGL 219
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
S++ + WN+M+ GY ++ + EAL LFR M ++P E ++V L+A A+LG G
Sbjct: 220 PSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVVLALSAVAQLGTAESGR 279
Query: 242 WIHNFLVTNC----FELNTIVVTAIIDMYCKCGCPERALQVFNTV--PKKGLSCWNSMVF 295
W+H+F VTN LN V TA+IDMY KCG E A+ VF + + + WN+MV
Sbjct: 280 WLHSF-VTNSSSRRVRLNARVGTALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVN 338
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
G AM+G+ EA+ F L++ L P I+FI VL AC+HSG V++ ++ F M E Y I+
Sbjct: 339 GYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIE 398
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMP-SDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P ++HY CMVD LGRAG +EEA +L++SM + PDA++W SLL+ACR H N+E+ ++ A
Sbjct: 399 PKVEHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHKNMELGQRIAD 458
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
++ S YVL+SN+YAA+ + E R +M+ I+KEPGCS +EV V EFV
Sbjct: 459 HLVANGLANSGTYVLLSNMYAAAGNWREVGRVRAMMRASGIQKEPGCSAVEVGRRVVEFV 518
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEMG 501
AG R HP+A E+Y L ++ + + G
Sbjct: 519 AGDRSHPRAAEIYAKLEEVNGMARARG 545
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 295/498 (59%), Gaps = 2/498 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M +++++HA + +GL R L +I+YA +F +I ++F++NT+IR
Sbjct: 1 MHEVRQLHAQFVVSGLLNHHSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTMIR 60
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G P +++LL + L+ ++P TY + KA + +G Q+H +++K G+
Sbjct: 61 GLMLGKRPYDSLLL-FNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGIS 119
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ IH+++I+MY + G + EA + E E + +A NSMI G G +D++R +FD+
Sbjct: 120 PNTHIHSSLIHMYTSSGSIVEAECVLREFSEE-NTLAKNSMISGYLSKGHVDKARAMFDQ 178
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +++ SW+++I+G +N EAL LF +M + P+E +VSLL+ACA LGA+ QG
Sbjct: 179 MKAKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQG 238
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
WIH ++ +++ + TA+IDMY KCG + + F +P++ + W +++ G A+
Sbjct: 239 RWIHAYIDRIGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIY 298
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G + +LF + + + P+ + F+A+L+AC+H+G V + K YF M I+PSI+H
Sbjct: 299 GQAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEH 358
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGRAG L+EAE+ I SMP P+++IWGS+LSACR H ++ A + +IEL+
Sbjct: 359 YGCMVDLLGRAGRLKEAEEFIISMPEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLIELE 418
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
Y L ++ + + +EA + R ++++ +E G S IEVDG +HEF+ G +H
Sbjct: 419 PRSGDRYKLAGLMFGNAGEKQEATKIRKMIEDQGMETTSGSSFIEVDGTIHEFLVGDTIH 478
Query: 481 PKAPEVYLLLNDLGLLIQ 498
+A E+Y + L L++
Sbjct: 479 NEAAEIYKVWKGLNGLLE 496
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 285/500 (57%), Gaps = 8/500 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M+ +K+IH + ++ G+ + I ++L +++YA+ V KP LF++N +I+
Sbjct: 1 MRQVKQIHGYTLRNGIDQTKILIEKLLEI-----PNLHYAHKVLHHSPKPTLFLYNKLIQ 55
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+S ++ ++ P + T+ LF A L G LH +K G E
Sbjct: 56 AYSSHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFE 115
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F ++ MY G L AR +FD++ V WN+M+ G A+ G++D + LF
Sbjct: 116 PDLFAATALLDMYTKVGTLELARKLFDQMPVR-GVPTWNAMMAGHARFGDMDVALELFRL 174
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M SRN VSW +MISGY R+ K+ EAL LF M QE+ + P+ T+ S+ A A LGA+
Sbjct: 175 MPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEI 234
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK-KGLSCWNSMVFGLA 298
G+ + + N F N V A+++MY KCG + A +VFN + + L WNSM+ GLA
Sbjct: 235 GQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLA 294
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G + +KL+ + PD ++F+ +L AC H G V + + F MT ++ I P +
Sbjct: 295 VHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKL 354
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD LGRAG L EA ++I+ MP PD++IWG+LL AC H N+E+A+ AA+ +
Sbjct: 355 EHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFA 414
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ YV++SN+YA++ Q++ + R +MK KI K G S IE G++H+F+ R
Sbjct: 415 LEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSFIEEGGQLHKFIVEDR 474
Query: 479 LHPKAPEVYLLLNDLGLLIQ 498
HP++ E++ LL+ + +I+
Sbjct: 475 SHPESNEIFALLDGVYEMIK 494
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/495 (36%), Positives = 298/495 (60%), Gaps = 40/495 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
K+ HA L++T L +P+ +S++++F S +GD+NYA +FTQ++ P+ FI NT+IRG++
Sbjct: 28 KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+S P A+ L+ +V + TYP + A A+LG + G + H V+K G D
Sbjct: 88 RSQNPYEAVSLYY-FMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDL 146
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ N +I Y NCG A C DES
Sbjct: 147 FVINALIQFYHNCGSFGCA-------------------------CDVFDES-------TV 174
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ V+WN MI+ ++ ++A +L EM + N++P E TMVSL+ ACA+LG + +G++
Sbjct: 175 RDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKF 234
Query: 243 IHNFLVT-NCFELNTIVV--TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
+H++ + FE+N +V TA++DMY KCG + ALQVF + + + WN+++ GLAM
Sbjct: 235 LHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAM 294
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G+ +AI LF ++ L PD ++FIA+L AC+H+G V++ F M ++I+P ++
Sbjct: 295 HGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRME 354
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY C+VD L RA +++A I +MP ++++W +LL ACR G+ ++A++ +++IEL
Sbjct: 355 HYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIEL 414
Query: 420 DKNESCG-YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
+ +SCG YV++SNLYA Q++ A++ R MK IEK PGCS IE++G +H+FVAG R
Sbjct: 415 EP-DSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDR 473
Query: 479 LHPKAPEVYLLLNDL 493
H + ++Y ++ ++
Sbjct: 474 SHLQTEQIYAMIEEM 488
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/563 (33%), Positives = 304/563 (53%), Gaps = 70/563 (12%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAG--DINYAYLVFTQIKKPNLFIWNTIIRG 61
L+K+ A +I G + A ++ TS G + +A +F P + +WN I RG
Sbjct: 41 LQKVQAQIITHGFQYNGYVAPNVV---TSWVGLKQMAHARHLFDHFPDPKVELWNAISRG 97
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ ++ R + LF M + ++P T+P + K+ A++G +G ++H V+K GLE
Sbjct: 98 YFHNAFYREVVFLFGKM-KSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEG 156
Query: 122 DQFIHNTIIYMYAN-------------------------------CGFLSEARLMFDEVD 150
+QF+ T+I +Y+ C ++ AR +FD +
Sbjct: 157 NQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFD-LA 215
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
E DVV WN M+ G + G++ +R+LFD M R+T+SWN+M++GY N + +LF
Sbjct: 216 PERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFE 275
Query: 211 EMQEQNI--------------------------------KPSEFTMVSLLNACAKLGAIR 238
EM E+N+ P++ T+V++L+ACA+LGA+
Sbjct: 276 EMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALD 335
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+W+H + T F+ + V A+IDMY KCG E A++VF ++ K L WNSM+ GLA
Sbjct: 336 LGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLA 395
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +A+ LF ++ + KPD I+FI VL +C H G V + YF M Y I P I
Sbjct: 396 THGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQI 455
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD GRAGLL+ A + ++ MP + DA+IW +LL ACR + NI++A+ A +++I
Sbjct: 456 EHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIV 515
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ YVL+SN+Y ++++ ++LM++ +K PGCSLIEV+ V EF +
Sbjct: 516 LEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDE 575
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
H ++ E+Y +L L L++ G
Sbjct: 576 RHSQSKEIYGVLKGLMKLLRSFG 598
>gi|357462223|ref|XP_003601393.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|358344321|ref|XP_003636238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490441|gb|AES71644.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502173|gb|AES83376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 486
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/470 (37%), Positives = 274/470 (58%), Gaps = 9/470 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M++ K IHAH +T L + + ++ F SP GD++YA+ +F Q+ +P F +NT+I
Sbjct: 20 MRNFKLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQPTTFFYNTLI 79
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA-QLGLARDGAQLHGRVVKQG 118
R S S+TP + L F M S I P ++ L K+ + + L D +HG V K G
Sbjct: 80 RAHSHSTTPSFSSLFFNRMRRNS-IAPDEFSFTFLLKSRSFTMPLVHD---IHGAVFKFG 135
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDE---VDTEFDVVAWNSMIIGLAKCGEIDESR 175
+ N +I++YA G AR +F++ V + D+V+W+ +++ AK GE+D +R
Sbjct: 136 FCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVAR 195
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
++FD M R+ VSW M+S Y + + E L+LF+EM+ + P E T++S+++ACA+LG
Sbjct: 196 KVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELG 255
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
G +H F+ N F + ++IDMY KCGC E A QVF+ +K L WN+M+
Sbjct: 256 DAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMM 315
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
A +GY +A +LF G+ S + PD ++ +A+L A H G V++ F M Y ++
Sbjct: 316 VCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVE 375
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P I+HY +VD LGR+G L+EA L+ SMP + +IWG+LL ACR HG++ M ++ K+
Sbjct: 376 PRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKK 435
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 465
++EL +E Y+L+ ++Y A+ + EA E R M K PGCS +E
Sbjct: 436 LLELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWVE 485
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 177/473 (37%), Positives = 281/473 (59%), Gaps = 42/473 (8%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+ A VF I + ++ WN +I G+ ++ A+ LF +M+ T+ ++P T S+
Sbjct: 163 GDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTN-VRPDEGTLVSV 221
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A AQ G G ++H V GF S +++
Sbjct: 222 LSACAQSGSIELGREIHTLVDDHH------------------GFGSSLKIV--------- 254
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
N+ I +KCG+++ + LF+ + ++ VSWN++I GY +KEAL LF+EM
Sbjct: 255 ----NAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLR 310
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL------VTNCFELNTIVVTAIIDMYCK 268
P++ TM+S+L ACA LGAI G WIH ++ VTN + + T++IDMY K
Sbjct: 311 SGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTN----GSALRTSLIDMYAK 366
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG E A QVFN++ K LS WN+M+FG AM+G N A LFS ++ + ++PD I+ + +
Sbjct: 367 CGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGL 426
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC+HSG ++ + F +T+ Y I P ++HY CM+D LG AGL +EAE++I MP +P
Sbjct: 427 LSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEP 486
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D +IW SLL AC+ HGN+E+A+ A++++E++ S YVL+SN+YA + ++E+ R
Sbjct: 487 DGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIRE 546
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ ++K PGCS IE+D VHEF+ G +LHP++ E+Y +L ++ +L++E G
Sbjct: 547 VLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAG 599
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 303/559 (54%), Gaps = 69/559 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +K++HA +I+ L +D A ++++ S N A VF Q+++PN+ + N++IR
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLIS-ALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+Q+S P A +F +M + TYP L KA + +H + K GL
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFG-LFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLS 149
Query: 121 FDQFIHNTIIYMYANCGFLS--EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D ++ N +I Y+ CG L +A +F+++ +E D V+WNSM+ GL K GE+ ++RRLF
Sbjct: 150 SDIYVPNALIDCYSRCGGLGVRDAMKLFEKM-SERDTVSWNSMLGGLVKAGELRDARRLF 208
Query: 179 D-------------------------------KMVSRNTVSWNSMISGY----------- 196
D KM RNTVSW++M+ GY
Sbjct: 209 DEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 197 --------VRNVK--------------FKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
+NV KEA L +M +K ++S+L AC +
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G + G IH+ L + N V+ A++DMY KCG ++A VFN +PKK L WN+M+
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTML 388
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GL ++G+ EAI+LFS ++ ++PD ++FIAVL +CNH+G +++ DYF M + Y +
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P ++HY C+VD LGR G L+EA K++++MP +P+ +IWG+LL ACR H +++AK+
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+++LD + Y L+SN+YAA+ +E + R MK + +EK G S +E++ +HEF
Sbjct: 509 NLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFT 568
Query: 475 AGGRLHPKAPEVYLLLNDL 493
+ HPK+ ++Y +L L
Sbjct: 569 VFDKSHPKSDQIYQMLGSL 587
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 10/220 (4%)
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
L CA L ++Q +H ++ + + +I C A++VFN V + +
Sbjct: 26 LPKCANLNQVKQ---LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
NS++ A N +A +FS +Q L D ++ +L AC+ + K
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLL--EEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+ E + I + ++D R G L +A KL M S+ D + W S+L K G
Sbjct: 143 I-EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKM-SERDTVSWNSMLGGLVKAGE 200
Query: 406 IEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+ + A + E+ + + + M + YA + +A E
Sbjct: 201 L---RDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFE 237
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 290/492 (58%), Gaps = 10/492 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IHA + K+ D S ++ S G + A F + N+ WN++I + Q+
Sbjct: 172 QIHALISKSRYLLDVYMGSALVDM-YSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQN 230
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQF 124
A+ +F+ M++ + ++P +T S+ A A R+G Q+H RVVK+ D
Sbjct: 231 GPAGKALEVFV-MMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLV 289
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MYA C ++EARL+FD + +VV+ SM+ G A+ + +R +F M+ +
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLR-NVVSETSMVCGYARAASVKAARLMFSNMMEK 348
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSWN++I+GY +N + +EA+ LF ++ ++I P+ +T +LLNACA L ++ G H
Sbjct: 349 NVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAH 408
Query: 245 NFLVTNCF------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
++ + F E + V ++IDMY KCG E VF + ++ + WN+M+ G A
Sbjct: 409 TQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYA 468
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
NGY A+++F + S KPD+++ I VL+AC+H+G V + + YF M + P
Sbjct: 469 QNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMK 528
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
H++CMVD LGRAG L+EA LI++MP PD ++WGSLL+AC+ HGNIE+ K A++++E
Sbjct: 529 DHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLME 588
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
+D S YVL+SN+YA ++++ + R M++ + K+PGCS IE+ VH F+ +
Sbjct: 589 IDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDK 648
Query: 479 LHPKAPEVYLLL 490
HP +++L+L
Sbjct: 649 RHPLKKDIHLVL 660
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 181/350 (51%), Gaps = 5/350 (1%)
Query: 106 DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL 165
D ++H R++K + FI N ++ Y CG+ +AR +FD + + + ++N+++ L
Sbjct: 37 DARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRM-PQRNTFSYNAVLSVL 95
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 225
K G++DE+ +F M + SWN+M+SG+ ++ +F+EAL F +M ++ +E++
Sbjct: 96 TKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFG 155
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
S L+ACA L + G IH + + + L+ + +A++DMY KCG A + F+ + +
Sbjct: 156 SALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVR 215
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
+ WNS++ NG +A+++F + + ++PD I+ +V++AC + +
Sbjct: 216 NIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIH 275
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+ + K + + + +VD + + EA + MP + + S++ + +
Sbjct: 276 ARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL-RNVVSETSMVCGYARAAS 334
Query: 406 IEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
++ A+ ++E KN L++ Y + + EEA+ LL+K I
Sbjct: 335 VKAARLMFSNMME--KNVVSWNALIAG-YTQNGENEEAVRLFLLLKRESI 381
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 188/447 (42%), Gaps = 101/447 (22%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRIL--------------AFCTSPA-------------- 34
D ++IHA +IKT + + +R++ F P
Sbjct: 37 DARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLT 96
Query: 35 --GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYP 92
G ++ A+ VF + +P+ WN ++ GF+Q A+ F+DM + ++
Sbjct: 97 KFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMH-SEDFVLNEYSFG 155
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE 152
S A A L G Q+H + K D ++ + ++ MY+ CG ++ A+ FD +
Sbjct: 156 SALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVR 215
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
++V+W NS+I+ Y +N +ALE+F M
Sbjct: 216 -NIVSW-------------------------------NSLITCYEQNGPAGKALEVFVMM 243
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV-TAIIDMYCKCGC 271
+ ++P E T+ S+++ACA AIR+G IH +V N +V+ A++DMY KC
Sbjct: 244 MDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRR 303
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A VF+ +P + + SMV G A A +FS + N+ +S+ A++
Sbjct: 304 VNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNV----VSWNALIAG 359
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
+G+ +A F L+ I P+ HY+
Sbjct: 360 YTQNGENEEAVRLFLLLKRE-SIWPT--HYT----------------------------- 387
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIE 418
+G+LL+AC ++++ +QA QI++
Sbjct: 388 -FGNLLNACANLADLKLGRQAHTQILK 413
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 33/209 (15%)
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG-----------CPER- 274
LL++C + + IH ++ F + ++D Y KCG P+R
Sbjct: 25 LLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRN 84
Query: 275 -------------------ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
A VF ++P+ WN+MV G A + EA++ F + S
Sbjct: 85 TFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHS 144
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLE 375
+ + SF + L+AC +N L++++ + + S +VD + G++
Sbjct: 145 EDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKS-RYLLDVYMGSALVDMYSKCGVVA 203
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
A++ M + + W SL++ ++G
Sbjct: 204 CAQRAFDGMAV-RNIVSWNSLITCYEQNG 231
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/542 (35%), Positives = 302/542 (55%), Gaps = 47/542 (8%)
Query: 1 MKDLKKIHAHL-IKTGLAKDP---IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWN 56
+K LKK+H+ + I L +P I R A C P + +F +I K N+ +N
Sbjct: 1040 IKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRH----IFDEIPKKNVVFFN 1095
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR + + +A+L+F +M I P TYP + KA + G Q+H VV+
Sbjct: 1096 VMIRSYVNNHLYSDALLVFKNM-AGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVR 1154
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES-- 174
GL+ + F+ N +I MY CG L EA + DZ+ DVV+WNS++ G A+ G+ D++
Sbjct: 1155 VGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCR-DVVSWNSLVAGCARNGQFDDALE 1213
Query: 175 -----------------------------------RRLFDKMVSRNTVSWNSMISGYVRN 199
+ +F K+ +++ VSWN MI+ Y+ N
Sbjct: 1214 VCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNN 1273
Query: 200 VKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV 259
EA+++F +M++ + P ++ S+L AC L A+ G IH ++V + N ++
Sbjct: 1274 SMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLE 1333
Query: 260 TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK 319
A+IDMY KCGC E A +VF+ + + + W SM+ MNG +A+ LFS +Q L
Sbjct: 1334 NALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLN 1393
Query: 320 PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
PD I+F++VL+AC+H+G +++ + YF LMTE KI P I+H+ CMVD LGRAG ++EA
Sbjct: 1394 PDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYG 1453
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQ 439
I+ MP +P+ +WG+LLSACR + N+ + AA Q+ +L +S YVL+SN+YA + +
Sbjct: 1454 FIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGR 1513
Query: 440 FEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQE 499
+E+ R +MK I+K PG S E+D VH F+AG + HP++ ++Y L+ L ++E
Sbjct: 1514 WEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKE 1573
Query: 500 MG 501
G
Sbjct: 1574 AG 1575
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/563 (33%), Positives = 304/563 (53%), Gaps = 70/563 (12%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAG--DINYAYLVFTQIKKPNLFIWNTIIRG 61
L+K+ A +I G + A ++ TS G + +A +F P + +WN I RG
Sbjct: 83 LQKVQAQIITHGFQYNGYVAPNVV---TSWVGLKQMAHARHLFDHFPDPKVELWNAISRG 139
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ ++ R + LF M + ++P T+P + K+ A++G +G ++H V+K GLE
Sbjct: 140 YFHNAFYREVVFLFGKM-KSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEG 198
Query: 122 DQFIHNTIIYMYAN-------------------------------CGFLSEARLMFDEVD 150
+QF+ T+I +Y+ C ++ AR +FD +
Sbjct: 199 NQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFD-LA 257
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
E DVV WN M+ G + G++ +R+LFD M R+T+SWN+M++GY N + +LF
Sbjct: 258 PERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFE 317
Query: 211 EMQEQNI--------------------------------KPSEFTMVSLLNACAKLGAIR 238
EM E+N+ P++ T+V++L+ACA+LGA+
Sbjct: 318 EMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALD 377
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+W+H + T F+ + V A+IDMY KCG E A++VF ++ K L WNSM+ GLA
Sbjct: 378 LGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLA 437
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +A+ LF ++ + KPD I+FI VL +C H G V + YF M Y I P I
Sbjct: 438 THGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQI 497
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD GRAGLL+ A + ++ MP + DA+IW +LL ACR + NI++A+ A +++I
Sbjct: 498 EHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIV 557
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ YVL+SN+Y ++++ ++LM++ +K PGCSLIEV+ V EF +
Sbjct: 558 LEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDE 617
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
H ++ E+Y +L L L++ G
Sbjct: 618 RHSQSKEIYGVLKGLMKLLRSFG 640
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 295/528 (55%), Gaps = 47/528 (8%)
Query: 1 MKDLKKIHAHL-IKTGLAKDP---IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWN 56
+K LKK+H+ + I L +P I R A C P + +F +I K N+ +N
Sbjct: 51 IKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRH----IFDEIPKKNVVFFN 106
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR + + +A+L+F +M I P TYP + KA + G Q+H VV+
Sbjct: 107 VMIRSYVNNHLYSDALLVFKNM-AGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVR 165
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES-- 174
GL+ + F+ N +I MY CG L EA + D++ DVV+WNS++ G A+ G+ D++
Sbjct: 166 VGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCR-DVVSWNSLVAGCARNGQFDDALE 224
Query: 175 -----------------------------------RRLFDKMVSRNTVSWNSMISGYVRN 199
+ +F K+ +++ VSWN MI+ Y+ N
Sbjct: 225 VCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNN 284
Query: 200 VKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV 259
EA+++F +M++ + P ++ S+L AC L A+ G IH ++V + N ++
Sbjct: 285 SMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLE 344
Query: 260 TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK 319
A+IDMY KCGC E A +VF+ + + + W SM+ MNG +A+ LFS +Q L
Sbjct: 345 NALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLN 404
Query: 320 PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
PD I+F++VL+AC+H+G +++ + YF LMTE KI P I+H+ CMVD LGRAG ++EA
Sbjct: 405 PDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYG 464
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQ 439
I+ MP +P+ +WG+LLSACR + N+ + AA Q+ +L +S YVL+SN+YA + +
Sbjct: 465 FIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGR 524
Query: 440 FEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
+E+ R +MK I+K PG S E+D VH F+AG + HP++ ++Y
Sbjct: 525 WEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIY 572
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 322/563 (57%), Gaps = 78/563 (13%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
K+ HA L++T L +P+ +S++++F S +GD+NYA +FTQ++ P+ FI NT+IRG++
Sbjct: 28 KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD- 122
+S P A+ L+ +V + TYP + A A+LG + G + H V+K G D
Sbjct: 88 RSQNPYEAVSLYY-FMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDL 146
Query: 123 -------QFIH-----------------------NTIIYMYANCGFLSEARLMFDEV--- 149
QF H N +I + N G +A + DE+
Sbjct: 147 FVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKL 206
Query: 150 -DTEFDVVAWNSMI---------------------IGL--------------AKCGEIDE 173
+ D V S++ +GL KC +I+
Sbjct: 207 DNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIES 266
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
++ +F+++ ++ +SW SM+SG ++ F+EAL LF++MQ I+ E T+V +L+ACA+
Sbjct: 267 AQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQ 326
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVV--TAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
GA+ QG++IH L+ + FE+N +V TA++DMY KCG + ALQVF + + + WN
Sbjct: 327 TGALDQGKYIH--LLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWN 384
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+++ GLAM+G+ +AI LF ++ L PD ++FIA+L AC+H+G V++ F M
Sbjct: 385 ALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNK 444
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
++I+P ++HY C+VD L RA +++A I +MP ++++W +LL ACR G+ ++A++
Sbjct: 445 FQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEK 504
Query: 412 AAKQIIELDKNESCG-YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
+++IEL+ +SCG YV++SNLYA Q++ A++ R MK IEK PGCS IE++G +
Sbjct: 505 IGRRVIELEP-DSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMI 563
Query: 471 HEFVAGGRLHPKAPEVYLLLNDL 493
H+FVAG R H + ++Y ++ ++
Sbjct: 564 HQFVAGDRSHLQTEQIYAMIEEM 586
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 293/502 (58%), Gaps = 3/502 (0%)
Query: 2 KDLKKIHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K++++IHA L G L D + + A S ++YA + + +KP LF N++IR
Sbjct: 20 KEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIR 79
Query: 61 GFSQSSTPRNAILLFIDMLVT-SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+S P + + +L + + ++P T L +A L + G Q+HG +++G
Sbjct: 80 AHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGF 139
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D + +I +YA G L +F+ + D V +M+ A+CG++ +R+LF+
Sbjct: 140 DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCP-DFVCRTAMVTACARCGDVVFARKLFE 198
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M R+ ++WN+MISGY + + +EAL +F MQ + +K + M+S+L+AC +LGA+ Q
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G W H+++ N ++ + T ++D+Y KCG E+A++VF + +K + W+S + GLAM
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAM 318
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG+ + ++LFS ++ + P+ ++F++VL C+ G V++ + +F M + I+P ++
Sbjct: 319 NGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLE 378
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY C+VD RAG LE+A +I+ MP P A +W SLL A R + N+E+ A+K+++EL
Sbjct: 379 HYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLEL 438
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ YVL+SN+YA S ++ R MK + K+PGCS++EV+GEVHEF G +
Sbjct: 439 ETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKS 498
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HPK ++ + D+ ++ G
Sbjct: 499 HPKYTQIDAVWKDISRRLRLAG 520
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 285/469 (60%), Gaps = 7/469 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ LK IHA + L + ++I F SP G ++YA +F+QI +PN F +NT+I
Sbjct: 254 MQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLI 313
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQ----LGLARDGAQLHGRVV 115
RG+S+SS+P ++ LF + + + + P T+ L K ++ L L ++HG V+
Sbjct: 314 RGYSKSSSPSQSVQLF-NQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVL 372
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G F F+ N +I++YA G + A +F+E+ DVV+W+ +++ + GE++ +R
Sbjct: 373 KLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEM-VGADVVSWSGLVVAHVRAGELELAR 431
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
++FD+M R+ VSW M+SGY + + +EALELFREM++ ++P E MV +++AC LG
Sbjct: 432 QVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLG 491
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+ G +H ++ N F + A+IDMY KCGC + A QVFN + +K L WNSM+
Sbjct: 492 DLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLITWNSMIS 551
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
A +G +A ++F+ + S ++PD ++F+A+LTA H G V+ F M Y ++
Sbjct: 552 ACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVE 611
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
++HY CMVD LGRAG LEEA KLI SM + ++WG+LL+ACR +G++EM ++ K+
Sbjct: 612 AGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGERVLKK 671
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
+IEL +E Y+L+ ++Y A+ + EA+E R M +K GCS +
Sbjct: 672 LIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 720
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 210/470 (44%), Gaps = 68/470 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ LK IHA + L + ++I F SP G ++YA +F+QI +PN F +NT+I
Sbjct: 100 MQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLI 159
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQ----LGLARDGAQLHGRVV 115
RG+S+SS+P ++ LF + + + + P T+ L K ++ L L ++HG
Sbjct: 160 RGYSKSSSPSQSVQLF-NQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHG--- 215
Query: 116 KQGLEFDQ------FIHNTIIYMYANCGFLS---------------EARLMFDEVDTEFD 154
G+++D+ +I N +++M L+ AR +
Sbjct: 216 -AGVDYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHAL 274
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V+A ++ G + + RLF ++ NT +N++I GY ++ ++++LF +M+
Sbjct: 275 VLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRR 334
Query: 215 QNIKPSEFTMVSLLNACAK----LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+ P FT LL ++ L I + IH ++ F + V+ A+I +Y G
Sbjct: 335 NCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARG 394
Query: 271 CP-------------------------------ERALQVFNTVPKKGLSCWNSMVFGLAM 299
P E A QVF+ +P++ + W MV G A
Sbjct: 395 VPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQ 454
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
EA++LF ++ ++PD ++ + V++AC G + + + E +
Sbjct: 455 AKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYIDEN-GFGWMVS 513
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ ++D + G ++ A ++ +M I W S++SAC HGN E A
Sbjct: 514 LCNALIDMYAKCGCMDLAWQVFNNMER-KSLITWNSMISACANHGNAEDA 562
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 165/409 (40%), Positives = 266/409 (65%), Gaps = 5/409 (1%)
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE 152
+L +AYA+ G A L + D F+ N ++ Y G ++EAR +FD + E
Sbjct: 80 ALVEAYAKAGRA----DLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGM-RE 134
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
D+V+WN+MI G A GE+D +R +F+ M R+ SW+SM+S Y + + K+ALEL+REM
Sbjct: 135 RDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREM 194
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+ + P TMVS+L+AC+ +GA+ G +H F+ +N EL+ + TA+IDMY KCG
Sbjct: 195 RAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDI 254
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
E +++VF+++P K + W+SM+ GLA +G+ ++A+ LFS + S L+P+ ++FI VL +C
Sbjct: 255 ENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISC 314
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H G V+ K YF+ M+ + + P ++HY CMVD LGR+G +EEA++LIR MP +PDA+I
Sbjct: 315 THLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVI 374
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
W +LL ACR + N+E+A++A ++ LD + YVL+SN+YA + +E E R ++
Sbjct: 375 WRALLGACRIYKNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRR 434
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+I++ PG S IE +HEF++G R HP++ E+Y +L ++ +++ G
Sbjct: 435 ERIQRIPGRSSIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAG 483
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 113/250 (45%), Gaps = 34/250 (13%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G+++ A VF + + F W++++ +++ ++A+ L+ +M + P T S+
Sbjct: 151 GEVDLAREVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAAC-VNPDCTTMVSV 209
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A + +G GA++H V G+E D + +I MYA CG + + +F + + D
Sbjct: 210 LSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVK-D 268
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V+ W+SMIIGLA G G+ +AL LF M
Sbjct: 269 VLTWSSMIIGLANHG------------------------FGH-------DALSLFSRMLS 297
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ ++P+E T + +L +C LG + G ++ + V + ++D+ + G E
Sbjct: 298 EGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIE 357
Query: 274 RALQVFNTVP 283
A Q+ +P
Sbjct: 358 EAKQLIRDMP 367
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 255 NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ 314
+ V TA+++ Y K G + A F+ P++ + N M+ G EA ++F G++
Sbjct: 74 DLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMR 133
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
+ D +S+ ++ +G+V+ A++ F M + +S M+ A +
Sbjct: 134 ----ERDMVSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFS-----WSSMMSAYTKGRRS 184
Query: 375 EEAEKLIRSMPS---DPDAIIWGSLLSACRKHGNIEMAKQAAKQI----IELD 420
++A +L R M + +PD S+LSAC G + + + + + +ELD
Sbjct: 185 KDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELD 237
>gi|356561772|ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Glycine max]
Length = 522
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 290/497 (58%), Gaps = 8/497 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++ A+L G A A +++ FCT ++ YA L+F I N ++ +I
Sbjct: 19 LNHLKQLQAYLTTLGHAHTHFYAFKLIRFCTLTLSNLTYARLIFDHIPSLNTHLFTAMIT 78
Query: 61 GFS-QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
++ +T +A+ LF ML + P +P +P K + A LH ++VK G
Sbjct: 79 AYAAHPATHPSALSLFRHMLRSQPPRPNHFIFPHALKTCPESCAAE---SLHAQIVKSGF 135
Query: 120 EFDQFIHNTIIYMYANC-GFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ ++ Y+ G L A+ +FDE+ ++ VV++ +M+ G A+ G+++ + R+F
Sbjct: 136 HEYPVVQTALVDSYSKVSGGLGNAKKVFDEM-SDRSVVSFTAMVSGFARVGDVESAVRVF 194
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+M+ R+ SWN++I+G +N F + +ELFR M + +P+ T+V L+AC +G ++
Sbjct: 195 GEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECNRPNGVTVVCALSACGHMGMLQ 254
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G WIH ++ N ++ V+ A++DMY KCG +A +VF P+KGL+ WNSM+ A
Sbjct: 255 LGRWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPEKGLTSWNSMINCFA 314
Query: 299 MNGYENEAIKLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
++G + AI +F + ++PD ++F+ +L AC H G V + YF +M + Y I+P
Sbjct: 315 LHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGLVEKGYWYFEMMVQEYGIEP 374
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
I+HY C++D LGRAG +EA +++ M +PD ++WGSLL+ C+ HG ++A+ AAK++
Sbjct: 375 QIEHYGCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKL 434
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
IE+D + ++++N+Y +++E +K+ K K PGCS IEVD +VH+F +
Sbjct: 435 IEIDPHNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKVPGCSWIEVDDQVHQFYSL 494
Query: 477 GRLHPKAPEVYLLLNDL 493
+ +PK ++Y++L L
Sbjct: 495 DKSNPKTEDLYIVLESL 511
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 182/508 (35%), Positives = 296/508 (58%), Gaps = 53/508 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKDP---IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
+ LK++HA I+T + P SRIL F S D+ YA+ VF QI+ PN F+WN
Sbjct: 39 ISQLKQLHAQTIRTTSSHHPNTFFLYSRILHF--SSLHDLRYAFRVFHQIENPNSFMWNA 96
Query: 58 IIRGFSQSSTPR-NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR ++S+ + +AI L+ ML + + T+P + KA A L +G Q+H +++K
Sbjct: 97 LIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILK 156
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G + D +I+N++++ YA C +D ++
Sbjct: 157 LGFDSDVYINNSLVHFYAT--------------------------------CDRLDFAKG 184
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M R+ VSWN +I +VR +F AL LF EMQ + +P +T+ S+ NACA +G+
Sbjct: 185 VFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQ-KFFEPDGYTIQSIANACAGMGS 243
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G + N LNT +++DMYCKCG E ALQ+F+ +PK+ ++ WNSM+ G
Sbjct: 244 LSLG-------IVNDVLLNT----SLVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILG 292
Query: 297 LAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
+ +G A++ F + ++ L P+ I+F+ VL+ACNH G V++ + YF +M YKIK
Sbjct: 293 FSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIK 352
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA-CRKHGNIEMAKQAAK 414
P ++HY C+VD L RAGL++EA ++ +MP PD +IW SLL A C+++ +E++++ A+
Sbjct: 353 PELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMAR 412
Query: 415 QIIELDKNESCG-YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
+++E + G YVL+S +YA++ ++ + R LM + + KEPGCS IE+DG HEF
Sbjct: 413 RVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEIDGVAHEF 472
Query: 474 VAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
AG HP+ E+Y L+ + ++ +G
Sbjct: 473 FAGDTSHPQTEEIYSALDVIEERVERVG 500
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 175/467 (37%), Positives = 273/467 (58%), Gaps = 2/467 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G I+ A +F + NL ++NTI+ + + R + + +ML P +P R+T S
Sbjct: 289 GAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGP-RPDRITMLSA 347
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A ++L G HG V++ GLE + N II MY CG A +FD + +
Sbjct: 348 VSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTR 407
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V +WNS+I G + G+++ + ++F M + VSWN+MI V+ FKEA+ELFR MQ
Sbjct: 408 V-SWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQS 466
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+ I + TMV + +AC LGA+ +WIH ++ + + TA++DM+ +CG P+
Sbjct: 467 EGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQS 526
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A+QVFN + K+ +S W + + +AM G AI+LF + +KPD + F+A+LTA +H
Sbjct: 527 AMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSH 586
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
G V Q F M + Y I P HY CMVD LGRAGLL EA LI SM +P+ +IWG
Sbjct: 587 GGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWG 646
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
SLL+ACR H N+++A AA++I ELD + +VL+SN+YA++ ++++ + RL +KE
Sbjct: 647 SLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKG 706
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
K PG S IE++G++ EF G HP+ + +L ++ ++++G
Sbjct: 707 AHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIG 753
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 216/480 (45%), Gaps = 91/480 (18%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAG--DINYAYLVFTQIKKPN-----LF 53
M +LK++H+ + K GL P++ + +++ CT + YA + N +
Sbjct: 46 MTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHY 105
Query: 54 IWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR 113
+++++IRGFS AI++F ++ + P T+P + A + +G Q+HG
Sbjct: 106 MFSSLIRGFSACGLGYKAIVVFRQLMCMGAV-PDNFTFPFVLSACTKSAALTEGFQVHGA 164
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
+VK G E D F+ N++I+ Y +CGEID
Sbjct: 165 IVKMGFERDMFVENSLIHFYG--------------------------------ECGEIDC 192
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
RR+FDKM RN VSW S+I GY + +KEA+ LF EM E I+P+ TMV +++ACAK
Sbjct: 193 MRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAK 252
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
L ++ GE + + E+N ++V A++DMY KCG ++A ++F+ K L +N++
Sbjct: 253 LQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTI 312
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH------------------- 334
+ G E + + + +PD I+ ++ ++AC+
Sbjct: 313 MSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGL 372
Query: 335 ----------------SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
GK A F M ++ ++ ++ R G +E A
Sbjct: 373 EGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVS-----WNSLIAGFVRNGDMESAW 427
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHG----NIEMAKQAAKQIIELDK------NESCGYV 428
K+ +MP D D + W +++ A + IE+ + + I DK +CGY+
Sbjct: 428 KIFSAMP-DSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYL 486
>gi|242042383|ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
gi|241922440|gb|EER95584.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
Length = 581
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 178/495 (35%), Positives = 286/495 (57%), Gaps = 10/495 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+ +L++ H+ LI+ G+A P A R+L+F P YA + P+ ++N +
Sbjct: 23 IAELRQHHSQLIRLGVASHPAHARRLLSFLARDPDSHFPYASRLLAHHPAPHPALFNPLF 82
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
S+ P + ++++ P+ P T+P + L L AQLH ++K G
Sbjct: 83 -----SALPTRHAARLLALMLSLPLHPDHFTFPRILPGAQPLHLV---AQLHALLLKLGF 134
Query: 120 E-FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
Q ++ + AN +R+ DVV+W +M+ GL K G +D++R LF
Sbjct: 135 HAHTQSLNALLAAYLANARPDLASRVFRGGGGDALDVVSWTTMVGGLVKLGRVDDARELF 194
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D M RN VSWN+M+SGYV+ +F +ALE+F EM+ + + + F + + AC GA+
Sbjct: 195 DGMPERNLVSWNAMMSGYVKTGRFLDALEVFDEMRARGVDGNAFVAATAVVACTGAGALA 254
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+G +H ++ + E++ + TA++DMYCKCGC E A +VF +P +GL+ WN M+ G A
Sbjct: 255 RGREVHRWVERSGIEMDDKLATAVVDMYCKCGCVEEAWRVFEALPARGLTSWNCMIGGFA 314
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G +A+ LF ++ + PD ++ + VLTAC H+G V++ + YF +++ Y I P +
Sbjct: 315 VHGRGEDALNLFGLMEREGVAPDDVTLVNVLTACAHAGMVSEGRHYFNYISQRYGIVPKM 374
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD GRAG LEEA+K+I+ MP +PD + G+L A + HG++++ + ++IE
Sbjct: 375 EHYGCMVDLYGRAGQLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIE 434
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD S YVL++NL A + ++E+ R LM E + KE G S+IEV GEV EF GG
Sbjct: 435 LDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGL 494
Query: 479 LHPKAPEVYLLLNDL 493
HP+A EVY + D+
Sbjct: 495 CHPQAEEVYAMARDM 509
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 171/486 (35%), Positives = 282/486 (58%), Gaps = 3/486 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K+ +++HA +++TG A + +L F + G + VF ++++P L +W IIR
Sbjct: 107 VKEGEEVHASVVRTGFACSEFVSGALLGFYVA-CGLVGKGRQVFDEMRQPGLVLWTLIIR 165
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ + P A+ LF M + P + ++ A LG +H + K G+E
Sbjct: 166 AYVCVTFPEKALELFRTMREVG-LTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIE 224
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ +T+I Y CG L A F E + ++V WN+MI + ++ ++LF
Sbjct: 225 VDAFVSSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQS 283
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VSWNSMI G+ R +++EAL F EM+ + P+ T++S L+ACA GA+ G
Sbjct: 284 MPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTG 343
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
WIH ++ N + + +++IDMY KCG ++A+Q+F ++ L W S+V GLAM+
Sbjct: 344 AWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMH 403
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G +A+ FS ++ + ++PD ++ + VL+AC H+G ++Q YF M + + + P ++H
Sbjct: 404 GRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEH 463
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGR G L+EA LI MP + + IIWG+ LSACR H N+E+ + AA++++ LD
Sbjct: 464 YGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLD 523
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ V++SN+YA +++ +M R +K+ ++K PGCS IEV+G VH F+ G H
Sbjct: 524 PRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSH 583
Query: 481 PKAPEV 486
P E+
Sbjct: 584 PCYTEI 589
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 178/438 (40%), Gaps = 89/438 (20%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +IH + I T +DP AASR+ N+F+WNT+IR
Sbjct: 29 LPRIHGNTIAT--VEDPSAASRL---------------------DCANVFVWNTMIRKQV 65
Query: 64 QSS-TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++ R+ LL+ + + ++P T+ L KA ++G ++H VV+ G
Sbjct: 66 ENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACS 125
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+F+ ++ Y CG + + R +FDE M
Sbjct: 126 EFVSGALLGFYVACGLVGKGRQVFDE--------------------------------MR 153
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
V W +I YV ++ALELFR M+E + P + ++++AC LG + +
Sbjct: 154 QPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKA 213
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL-------------------------- 276
+H F+ + E++ V + +I Y +CG + A
Sbjct: 214 MHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNN 273
Query: 277 -----QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
Q+F ++P + + WNSM+ G A G EA+ F ++ S + P+ ++ ++ L+A
Sbjct: 274 LELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSA 333
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C G ++ + + + S ++D + G +++A ++ + D
Sbjct: 334 CASHGALDTGA-WIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE-STRRDLF 391
Query: 392 IWGSLLSACRKHGNIEMA 409
W S++ HG E A
Sbjct: 392 TWTSIVCGLAMHGRGEKA 409
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 7/262 (2%)
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQ--EQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
N WN+MI V N L MQ ++P+ T + LL A +++GE
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H +V F + V A++ Y CG + QVF+ + + GL W ++ +
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+A++LF ++ L PD ++ V++AC G + AK + E I+ S
Sbjct: 173 PEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFI-EKSGIEVDAFVSS 231
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
++ G G L+ A + + P + ++W +++ +H N+E+ KQ + + + D
Sbjct: 232 TLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQSMPDRD-- 288
Query: 423 ESCGYVLMSNLYAASYQFEEAM 444
+ M +A Q++EA+
Sbjct: 289 -VVSWNSMIGGFARIGQYQEAL 309
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 169/469 (36%), Positives = 284/469 (60%), Gaps = 3/469 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+KIH H +K G + + S L + G + +A +F + +L WNT+I G+SQ
Sbjct: 136 RKIHVHALKLGF-ESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQ 194
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ + + LF D + + I+ +T + A + LG + + + LE D +
Sbjct: 195 YNKYKEVLRLF-DAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVY 253
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ NT+I MY A+ +FD + E ++V+WN++++G AK G + +R+LFD M R
Sbjct: 254 LGNTLIDMYGRRSLAELAQGVFDRM-RERNIVSWNALVMGHAKVGNLTAARKLFDNMPKR 312
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SW SMI+GY + +F +A++LF+EM +KP + T+ S+L+ACA LG + G +H
Sbjct: 313 DVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVH 372
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+++ + + + V ++IDMYCKCG E+AL+VF+ + K W S++ GLA+NG+ N
Sbjct: 373 HYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFAN 432
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A+ LFS + ++P + +F+ +L AC H+G VN+ +YF M + + P++KHY C+
Sbjct: 433 SALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCV 492
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD L R+G +++A + I+ MP PD ++W LLSAC+ HGN+ +A+ A K+++ELD +S
Sbjct: 493 VDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDS 552
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
YVL+SN YA ++++AM+ R LM++ ++K G S IEVDG V +
Sbjct: 553 GNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEVDGMVSNY 601
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 207/433 (47%), Gaps = 70/433 (16%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HAHLI+T L DP S ++ + + +++ A+LVF QI+ P L +WN +IRG SQ
Sbjct: 34 KELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQ 93
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S P AI ++ M I LT LFKA A++ G ++H +K G E F
Sbjct: 94 SDHPVEAIHMYTRMH-HQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLF 152
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N +I+MYA CG L A+ MFD + + D+V+WN++I G ++ + E RLFD M +
Sbjct: 153 VSNALIHMYAMCGQLGFAQKMFDGM-LDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTA- 210
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
NIK TMV ++ AC+ LG + +
Sbjct: 211 ------------------------------ANIKADAVTMVKIILACSHLGDWEFADSMV 240
Query: 245 NFLVTNCFELNTIVVTAIIDMY-------------------------------CKCGCPE 273
++ N E++ + +IDMY K G
Sbjct: 241 KYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLT 300
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A ++F+ +PK+ + W SM+ G + ++A+KLF + ++ +KPD ++ +VL+AC
Sbjct: 301 AARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACA 360
Query: 334 HSGK--VNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
H GK V A ++ + ++ I + ++D + G++E+A ++ M D D++
Sbjct: 361 HLGKLDVGWAVHHY---IRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMK-DKDSV 416
Query: 392 IWGSLLSACRKHG 404
W S++S +G
Sbjct: 417 SWTSVISGLAVNG 429
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 174/392 (44%), Gaps = 52/392 (13%)
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYA-NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
+LH +++ L D F+ + +I Y+ + L +A L+F++++ VV
Sbjct: 35 ELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVV----------- 83
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
WN MI G ++ EA+ ++ M Q I + T++ L
Sbjct: 84 ---------------------WNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFL 122
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
ACA++ I G IH + FE V A+I MY CG A ++F+ + + L
Sbjct: 123 FKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDL 182
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
WN+++ G + E ++LF + ++N+K D ++ + ++ AC+H G A
Sbjct: 183 VSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKY 242
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ E ++ + + ++D GR L E A+ + M + + + W +L+ K GN+
Sbjct: 243 IKEN-NLEIDVYLGNTLIDMYGRRSLAELAQGVFDRM-RERNIVSWNALVMGHAKVGNLT 300
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME--ERLLMKEVKIEKEPGCSL-- 463
A+ K + K + + M Y+ + QF +A++ + ++ +VK +K S+
Sbjct: 301 AAR---KLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLS 357
Query: 464 -------IEVDGEVHEFVAGGRLHPKAPEVYL 488
++V VH ++ R H ++Y+
Sbjct: 358 ACAHLGKLDVGWAVHHYI---RRHGVQADIYV 386
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 290/502 (57%), Gaps = 8/502 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
++IH+H+ + GL D I A+ ++ +C + A +F ++ K ++ W+ +I G++
Sbjct: 278 RRIHSHISERGLETDMIVANALITMYC--KCNSVQEAREIFDRMSKRDVISWSAMIAGYA 335
Query: 64 QSSTPR----NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
QS + + ++ + + P ++T+ S+ +A G G Q+H + K G
Sbjct: 336 QSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGF 395
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D+ + I MYA CG + EA +F ++ + +VVAW S + KCG++ + ++F
Sbjct: 396 ELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANK-NVVAWTSFLSMYIKCGDLSSAEKVFS 454
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M +RN VSWN MI+GY +N + EL M+ + +P T++++L AC L + +
Sbjct: 455 EMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLER 514
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ +H V E +T+V T++I MY KCG A VF+ + + WN+M+ G
Sbjct: 515 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQ 574
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G EA+ LF + + P+ I+ AV++AC+ +G V + ++ F +M E +K+ P +
Sbjct: 575 HGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQ 634
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAG L+EAE+ I+SMP +PD +W +LL AC+ H N+++A++AA I+EL
Sbjct: 635 HYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILEL 694
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ + + Y+ +SN+YA + +++++ + R +M + ++K+ G S IE+DG +H FVA
Sbjct: 695 EPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCA 754
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+ ++ L L ++E G
Sbjct: 755 HPEIDAIHAELETLTKEMKEAG 776
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 208/416 (50%), Gaps = 43/416 (10%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+D K +H L + G+ D + ++ F S D+ A VF ++ ++ W+++I
Sbjct: 73 EDGKMVHKQLDELGVEIDIYLGNSLINF-YSKFEDVASAEQVFRRMTLRDVVTWSSMIAA 131
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++ ++ P A F + + + I+P R+T+ S+ KA + G ++H V G+E
Sbjct: 132 YAGNNHPAKAFDTF-ERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMET 190
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D + +I MY+ CG +S A +F ++ TE +VV+W ++I A + R+L
Sbjct: 191 DVAVATALITMYSKCGEISVACEVFHKM-TERNVVSWTAIIQANA------QHRKL---- 239
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
EA EL+ +M + I P+ T VSLLN+C A+ +G
Sbjct: 240 ---------------------NEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGR 278
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH+ + E + IV A+I MYCKC + A ++F+ + K+ + W++M+ G A +G
Sbjct: 279 RIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSG 338
Query: 302 YE-----NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-YKIK 355
Y+ +E +L ++ + P+ ++F+++L AC G + Q + +++ +++
Sbjct: 339 YKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELD 398
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
S++ + + + + G + EAE++ M ++ + + W S LS K G++ A++
Sbjct: 399 RSLQ--TAIFNMYAKCGSIYEAEQVFSKM-ANKNVVAWTSFLSMYIKCGDLSSAEK 451
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 193/438 (44%), Gaps = 74/438 (16%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+KIH + G+ D +A + L S G+I+ A VF ++ + N+ W II+ +Q
Sbjct: 177 RKIHTIVKAMGMETD-VAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQ 235
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A L+ ML + I P +T+ SL + G ++H + ++GLE D
Sbjct: 236 HRKLNEAFELYEQML-QAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMI 294
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N +I MY C + EAR +FD + ++ DV++W++MI G A+
Sbjct: 295 VANALITMYCKCNSVQEAREIFDRM-SKRDVISWSAMIAGYAQ----------------- 336
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
SGY E +L M+ + + P++ T +S+L AC GA+ QG IH
Sbjct: 337 ---------SGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIH 387
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT----------------------- 281
L FEL+ + TAI +MY KCG A QVF+
Sbjct: 388 AELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLS 447
Query: 282 --------VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+P + + WN M+ G A NG + +L S +++ +PD ++ I +L AC
Sbjct: 448 SAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACG 507
Query: 334 -----HSGKVNQAKDY-FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
GK+ A+ L ++T I YS + G + EA + M S+
Sbjct: 508 ALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYS-------KCGQVAEARTVFDKM-SN 559
Query: 388 PDAIIWGSLLSACRKHGN 405
D + W ++L+ +HG+
Sbjct: 560 RDTVAWNAMLAGYGQHGD 577
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 173/371 (46%), Gaps = 55/371 (14%)
Query: 102 GLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLM---FDEVDTEFDVVAW 158
G R+ QL G + ++GL + + +I A + +++ DE+ E D+
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
NS+I +K ++ + ++F +M R+ V+W+SMI+ Y N +A + F M + NI+
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
P+ T +S+L AC + +G IH + E + V TA+I MY KCG A +V
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEV 214
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN----- 333
F+ + ++ + W +++ A + NEA +L+ + + + P+ ++F+++L +CN
Sbjct: 215 FHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL 274
Query: 334 ------HS------------------------GKVNQAKDYFTLMTETYKIKPSIKHYSC 363
HS V +A++ F M+ K + +S
Sbjct: 275 NRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMS-----KRDVISWSA 329
Query: 364 MVDALGRAGL-----LEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
M+ ++G ++E +L+ M + P+ + + S+L AC HG +E +Q +
Sbjct: 330 MIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAE 389
Query: 416 I----IELDKN 422
+ ELD++
Sbjct: 390 LSKVGFELDRS 400
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 337 bits (865), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 166/502 (33%), Positives = 291/502 (57%), Gaps = 8/502 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
++IH+H+ + GL D + A+ ++ +C I A F ++ K ++ W+ +I G++
Sbjct: 300 RRIHSHISERGLETDVVVANALITMYCKCNC--IQDARETFDRMSKRDVISWSAMIAGYA 357
Query: 64 QSS----TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
QS + + ++ + + P ++T+ S+ KA + G G Q+H + K G
Sbjct: 358 QSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGF 417
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D+ + I MYA CG + EA +F +++ + +VVAW S++ KCG++ + ++F
Sbjct: 418 ESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK-NVVAWASLLTMYIKCGDLTSAEKVFS 476
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M +RN VSWN MI+GY ++ + EL M+ + +P T++S+L AC L A+ +
Sbjct: 477 EMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALER 536
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ +H V E +T+V T++I MY KCG A VF+ + + WN+M+ G
Sbjct: 537 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQ 596
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G EA+ LF + + P+ I+F AV++AC +G V + ++ F +M E +++KP +
Sbjct: 597 HGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQ 656
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAG L+EAE+ I+ MP +PD +W +LL AC+ H N+++A+ AA I+ L
Sbjct: 657 HYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRL 716
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ + + YV +SN+YA + +++++ + R +M + ++K+ G S IE+DG +H FVA
Sbjct: 717 EPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCA 776
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+ ++ L L ++E G
Sbjct: 777 HPEIDSIHAELEMLTKEMKEAG 798
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 237/498 (47%), Gaps = 54/498 (10%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+D K +H L + GLA D + ++ F S GD+ VF ++ ++ W+++I
Sbjct: 95 EDGKMVHKQLDELGLAIDIYLGNSLINF-YSKFGDVASVEQVFRRMTLRDVVTWSSMIAA 153
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++ ++ P A F + + + I+P R+T+ S+ KA + ++H V G+E
Sbjct: 154 YAGNNHPAKAFDTF-ERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMET 212
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D + +I MY+ KCGEI + +F KM
Sbjct: 213 DVAVATALITMYS--------------------------------KCGEISLACEIFQKM 240
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
RN VSW ++I ++ K EA EL+ +M + I P+ T VSLLN+C A+ +G
Sbjct: 241 KERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGR 300
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH+ + E + +V A+I MYCKC C + A + F+ + K+ + W++M+ G A +G
Sbjct: 301 RIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSG 360
Query: 302 YE-----NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-YKIK 355
Y+ +E +L ++ + P+ ++F+++L AC+ G + Q + +++ ++
Sbjct: 361 YQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESD 420
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
S++ + + + + G + EAE++ M + + + W SLL+ K G++ A+ K
Sbjct: 421 RSLQ--TAIFNMYAKCGSIYEAEQVFSKM-ENKNVVAWASLLTMYIKCGDLTSAE---KV 474
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK-EPG----CSLIEVDGEV 470
E+ + LM YA S + E L+ +K+E +P S++E G +
Sbjct: 475 FSEMSTRNVVSWNLMIAGYAQSGDIAKVFE---LLSSMKVEGFQPDRVTIISILEACGAL 531
Query: 471 HEFVAGGRLHPKAPEVYL 488
G +H +A ++ L
Sbjct: 532 SALERGKLVHAEAVKLGL 549
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 195/441 (44%), Gaps = 74/441 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ ++IH + +G+ D +A + L S G+I+ A +F ++K+ N+ W II+
Sbjct: 195 LEKAREIHTVVKASGMETD-VAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQ 253
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+Q A L+ ML + I P +T+ SL + G ++H + ++GLE
Sbjct: 254 ANAQHRKLNEAFELYEKML-QAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLE 312
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + N +I MY C + +AR FD + ++ DV++W++MI G A+
Sbjct: 313 TDVVVANALITMYCKCNCIQDARETFDRM-SKRDVISWSAMIAGYAQ------------- 358
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
SGY E +L M+ + + P++ T +S+L AC+ GA+ QG
Sbjct: 359 -------------SGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQG 405
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG-----------LSC 289
IH + FE + + TAI +MY KCG A QVF+ + K + C
Sbjct: 406 RQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKC 465
Query: 290 --------------------WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
WN M+ G A +G + +L S ++ +PD ++ I++L
Sbjct: 466 GDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISIL 525
Query: 330 TACN-----HSGKVNQAKDY-FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
AC GK+ A+ L ++T I YS + G + EA +
Sbjct: 526 EACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYS-------KCGEVTEARTVFDK 578
Query: 384 MPSDPDAIIWGSLLSACRKHG 404
+ S+ D + W ++L+ +HG
Sbjct: 579 I-SNRDTVAWNAMLAGYGQHG 598
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 167/356 (46%), Gaps = 41/356 (11%)
Query: 102 GLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLM---FDEVDTEFDVVAW 158
G ++ QL G + ++GL + + II A + +++ DE+ D+
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
NS+I +K G++ ++F +M R+ V+W+SMI+ Y N +A + F M++ NI+
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
P+ T +S+L AC + + IH + + E + V TA+I MY KCG A ++
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEI 236
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
F + ++ + W +++ A + NEA +L+ + + + P+ ++F+++L +CN +
Sbjct: 237 FQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296
Query: 339 NQAKDYFTLMT----------------------------ETYK--IKPSIKHYSCMVDAL 368
N+ + + ++ ET+ K + +S M+
Sbjct: 297 NRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGY 356
Query: 369 GRAGL-----LEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++G L+E +L+ M + P+ + + S+L AC HG +E +Q +I
Sbjct: 357 AQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI 412
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 337 bits (864), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 293/541 (54%), Gaps = 39/541 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTII 59
++ L +IH IK G+ D +++ C D + YA + +P+ F++NT++
Sbjct: 10 LRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLV 69
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S+S P N++ +F++M+ + P ++ + KA R G Q+H + +K GL
Sbjct: 70 RGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGL 129
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE------------------------FDV 155
E F+ T+I MY CG + AR +FDE+ FD
Sbjct: 130 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 189
Query: 156 V------AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
+ +WN M+ G K GE++ ++R+F +M R+ VSW++MI G N F E+ F
Sbjct: 190 MLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYF 249
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
RE+Q + P+E ++ +L+AC++ G+ G+ +H F+ + V A+IDMY +C
Sbjct: 250 RELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 309
Query: 270 GCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G A VF + K+ + W SM+ GLAM+G EA++LF+ + + + PD ISFI++
Sbjct: 310 GNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISL 369
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC+H+G + + +DYF+ M Y I+P I+HY CMVD GR+G L++A I MP P
Sbjct: 370 LHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPP 429
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
AI+W +LL AC HGNIE+A+Q +++ ELD N S VL+SN YA + ++++ R
Sbjct: 430 TAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRK 489
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGR-------LHPKAPEVYLLLNDLGLLIQEMG 501
M +I+K SL+EV +++F AG + H K E+ L L D E+
Sbjct: 490 SMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVA 549
Query: 502 S 502
S
Sbjct: 550 S 550
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 99/230 (43%), Gaps = 22/230 (9%)
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER---ALQVFNT 281
+SLLN+C L A+ Q IH + + ++ +I ++C + A ++
Sbjct: 1 LSLLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLC 56
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK-PDYISFIAVLTACNHSGKVNQ 340
P+ +N++V G + + + ++ +F + PD SF V+ A +
Sbjct: 57 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN---FRS 113
Query: 341 AKDYFTLMTETYK--IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
+ F + + K ++ + + ++ G G +E A K+ M P+ + W ++++
Sbjct: 114 LRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM-HQPNLVAWNAVIT 172
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNES------CGYVLMSNLYAASYQFEE 442
AC + ++ A++ ++ L +N + GY+ L +A F E
Sbjct: 173 ACFRGNDVAGAREIFDKM--LVRNHTSWNVMLAGYIKAGELESAKRIFSE 220
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/504 (33%), Positives = 291/504 (57%), Gaps = 34/504 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNL---FIWNT 57
+ L +IH H++K GL +P+ ++ + + A +F+ L F++NT
Sbjct: 42 LPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNT 101
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IR ++Q+ ++ L +++ I P + TYP + KA A L + G +HG VVK
Sbjct: 102 LIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKF 161
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G + D + NT+++MY+ C G I+ +R++
Sbjct: 162 GFDCDIHVQNTMVHMYSCCA-------------------------------GGINSARKV 190
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD+M ++V+W++MI GY R + EA+ LFREMQ + P E TMVS+L+AC LGA+
Sbjct: 191 FDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGAL 250
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G+WI ++ + V A+IDM+ KCG +AL++F + +K + W S++ G+
Sbjct: 251 ELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGM 310
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AM+G EA LF + SS + PD ++FI +L+AC+HSG V + ++YF M + YK+ P
Sbjct: 311 AMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPK 370
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY CMVD R GL++EA + +R+MP +P+ +I +L+SACR HG ++ ++ K ++
Sbjct: 371 IEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLM 430
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+ + YVL+SN+YA + +E+ + R +M+ ++K PG ++IE+D E++EFVAG
Sbjct: 431 KHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGD 490
Query: 478 RLHPKAPEVYLLLNDLGLLIQEMG 501
+ H + E+Y +++++G +++ G
Sbjct: 491 KSHKQHKEIYEMVDEMGREMKKSG 514
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/494 (36%), Positives = 278/494 (56%), Gaps = 42/494 (8%)
Query: 8 HAHL-------IKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKK-PNLFIWNTII 59
HAH+ I + D + +++ F S G A L+FTQ + + N++I
Sbjct: 56 HAHMNQMLSQMIMNYIPIDHLNLMKLIDFSVSSHGFAASA-LLFTQFYGFIDSDLCNSMI 114
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R ++ S+ +++ ++ M + I P T+P++ K+ AQL G +H +++ G
Sbjct: 115 RCYTDSNKHLHSVFIYTQMW-KNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGF 173
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E + ++ ++ MY C +S+A R++FD
Sbjct: 174 ESNVYVSTALVNMYGTCSSVSDA--------------------------------RQVFD 201
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
++ RN VSWN++I+GY N F++ +++FREMQ KP E TMV +L ACA LGA+ Q
Sbjct: 202 EIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQ 261
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G WI +++ N LN V TA+IDMY KCG + A ++F + K + WN ++ G AM
Sbjct: 262 GRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAM 321
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG A++ FS + KPD ++F+ VL AC H G VN+ + YFT M E + ++P I+
Sbjct: 322 NGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIE 381
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAG L+EA++LI++M PD IIW LL ACR HGNI++ + A K+++EL
Sbjct: 382 HYGCMVDLLGRAGFLDEAQQLIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIKKLLEL 441
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ N YVL++NLYA ++++ E R +M ++ K PGCS IE+D V+EFV +
Sbjct: 442 EPNNGENYVLLANLYARDQRWDKVGEVREMMDCRRVRKVPGCSSIEIDNVVYEFVVSNYI 501
Query: 480 HPKAPEVYLLLNDL 493
P EVY LL D+
Sbjct: 502 KPGFEEVYKLLADM 515
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/484 (35%), Positives = 288/484 (59%), Gaps = 2/484 (0%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFID 77
KD +A + +++ + G ++ A+ + N+ W +I G+S++ A+ F
Sbjct: 169 KDAVAWTTVISG-LAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNS 227
Query: 78 MLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCG 137
ML + I+P +T L A AQL G LH V ++G+ + +I MYA CG
Sbjct: 228 ML-SDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCG 286
Query: 138 FLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYV 197
+ A +FD + +WN+MI G K G +D +R LFD+M R+ V++NS+I+GY+
Sbjct: 287 DIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYI 346
Query: 198 RNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTI 257
+ +EAL LF +M+ +++ FTMVSLL ACA LGA+ QG +H + E++
Sbjct: 347 HGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIY 406
Query: 258 VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN 317
+ TA++DMY KCG E A VF + + + W++M+ GLA NG A++ F ++
Sbjct: 407 LGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDG 466
Query: 318 LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEA 377
+P+ +++IA+LTAC+HS +++ + YF M + I+P I+HY CM+D LGR+GLL+EA
Sbjct: 467 FQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEA 526
Query: 378 EKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
L+R+MP P+A+IW S+LSACR H + +A+ AA+ +++L+ +E YV + N+Y S
Sbjct: 527 MDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDS 586
Query: 438 YQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLI 497
Q+E+A + R LM+E ++K G S I V G+VH+F+ R HP+ E+ ++ ++ +
Sbjct: 587 RQWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRL 646
Query: 498 QEMG 501
+ +G
Sbjct: 647 KSVG 650
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 209/439 (47%), Gaps = 45/439 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKP-NLFIWN 56
++ ++HA L+ +G P +AS +L C +P ++ Y + + P + F+++
Sbjct: 12 VRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFLFD 71
Query: 57 TIIRG-FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD--GAQLHGR 113
T +R F SS P + ++L+ M T + T+ LFK A+ G A LH
Sbjct: 72 TALRACFRASSGPESPLILYRRMRRTG-VCTDAFTFHFLFKCCAR-GRAHVLLCQMLHAA 129
Query: 114 VVKQGLEFD-QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID 172
+ L + N II+MY G +AR FD++ + D VAW ++I GLAK G +D
Sbjct: 130 CFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVK-DAVAWTTVISGLAKLGLLD 188
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
++ L +RN +SW +ISGY R + EA++ F M I+P E T++ LL+ACA
Sbjct: 189 DAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACA 248
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK-------- 284
+L + G +H + ++ +V A+IDMY KCG RA +VF+ + +
Sbjct: 249 QLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWN 308
Query: 285 ------------------------KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
+ L +NS++ G G EA+ LF ++ +L+
Sbjct: 309 AMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRA 368
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
D + +++LTAC G + Q + + E ++ I + ++D + G +EEA +
Sbjct: 369 DNFTMVSLLTACASLGALPQGRALHACI-EQRLVEVDIYLGTALLDMYLKCGRVEEASLV 427
Query: 381 IRSMPSDPDAIIWGSLLSA 399
++M S D W ++++
Sbjct: 428 FQAM-SVRDVHTWSAMIAG 445
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/485 (35%), Positives = 279/485 (57%), Gaps = 39/485 (8%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+LKKIHAH++K L++ ++++ C G+ YA L+F + PN F++N +IR +
Sbjct: 74 ELKKIHAHIVKFSLSQSSFLVTKMVDVCNH-YGETEYANLLFKGVADPNAFLYNAMIRAY 132
Query: 63 SQSSTPRNAILLFIDMLVT----SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
+ AI ++ ML +PI P + T+P + K+ A L G Q+HG V K G
Sbjct: 133 KHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFG 192
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ + + N+++ MY KC +D++ R+F
Sbjct: 193 QKSNTVVENSLVEMYV--------------------------------KCDSLDDAHRVF 220
Query: 179 DKMVSRNTV--SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
++M R+ SW +++SGY R + +ALE FR MQ I+P E ++VS+L CA+LGA
Sbjct: 221 EEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGA 280
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G+WIH + F N V A+I+MY KCG ++ ++F+ + ++ + W++M+ G
Sbjct: 281 LELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVG 340
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA +G EAI+LF +Q + ++P I+F+ +LTAC H+G +N+ YF M Y I+P
Sbjct: 341 LANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEP 400
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++HY C+V+ LG +G L++A +L++ MP PD+ IWGSLLS+CR HGN+++A A + +
Sbjct: 401 GVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHL 460
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+EL+ ++ YVL+SNLYA +++ R LM+ ++K PGCS IEVD V EF +G
Sbjct: 461 LELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASG 520
Query: 477 GRLHP 481
P
Sbjct: 521 DDSKP 525
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 285/476 (59%), Gaps = 6/476 (1%)
Query: 2 KDLKKIHAHLIKTG-LAKDP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
K L +I A LI L+ P + A +++ C + A ++ +A L+F Q+ PN+F WN II
Sbjct: 25 KQLLQIQAQLITNPPLSLHPNLIAVKLIGACAANA-NLYHAQLIFAQLPNPNVFSWNAII 83
Query: 60 RGFSQSSTPRNAILLFIDML-VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
+ +A+ F L + S P Y SL KA A L DG ++H V+K G
Sbjct: 84 KAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSG 143
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L+ + + +++ MY + A +FDE+ DVV+WN+M+ G CG+++ +RR+F
Sbjct: 144 LDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLR-DVVSWNTMVSGYCLCGDLESARRVF 202
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGAI 237
D+M+ R+ +SWN+MI GYV+N K+ +A+E+F EMQ+ + P + T+VS+L+ACA +GA+
Sbjct: 203 DQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGAL 262
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G WI F+ LN + A+IDMY KCG E A ++F+ + ++ + W++M+ G
Sbjct: 263 DFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICGS 322
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
+G +EA +S + +KP+ ++F+ +L+AC+H+G V++ + F+ M + Y+I P
Sbjct: 323 GTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPK 382
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
+ HY C++D L RAG L+EAE LI SMP +P+ I+WG+LL CR H + ++ A+ ++
Sbjct: 383 VGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWGALLGGCRIHKDFRRGERVAQHLL 442
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
ELD + YV ++ A+ + ++A L M+ I K+PGCS IEV VHEF
Sbjct: 443 ELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQHKGIIKDPGCSKIEVHNTVHEF 498
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/503 (36%), Positives = 292/503 (58%), Gaps = 35/503 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGD-INYAYLVFTQIKKPNLFIWNTI 58
+ +LK+I A+ IKT L D ++++ FCT +P +++A+ +F QI ++ ++N +
Sbjct: 42 LNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIM 101
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG+++S++P A LF ++L S + P T+ SL KA A R+G LH VK G
Sbjct: 102 ARGYARSNSPYLAFSLFGELLC-SGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLG 160
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L + +I T+I MYA +C +++ +R +F
Sbjct: 161 LNHNIYICPTLINMYA--------------------------------ECNDMNAARGVF 188
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D+M VS+N++I+GY R+ + EAL LFRE+Q NI+P++ TM+S++ +CA LGA+
Sbjct: 189 DEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALD 248
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+WIH ++ F+ V TA+IDM+ KCG A+ +F + + W++M+ A
Sbjct: 249 LGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFA 308
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +AI +F ++ ++PD I+F+ +L AC+H+G V Q + YF M++TY I P I
Sbjct: 309 THGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGI 368
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
KHY CMVD LGRAG L+EA + + I+W +LLSAC HGN+EMAK+ ++I E
Sbjct: 369 KHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFE 428
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD YV++SNLYA ++E+ R LMK+ + K PGCS +EV+ VHEF +G
Sbjct: 429 LDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDG 488
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
+H + E+ L++L I+ +G
Sbjct: 489 VHCVSVELRRALDELMKEIKLVG 511
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 309/555 (55%), Gaps = 76/555 (13%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYL--------VFTQIKKP--NLF 53
++++HA ++K GL +P AA+R+++ YA L VF I+ P + F
Sbjct: 368 VRELHAQVLKQGLHLNPRAAARLVS---------AYALLRLLPSSRRVFDAIRDPHADAF 418
Query: 54 IWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLH 111
+ NT++R ++ PR+A+ F M P+R TY L KA + G+A A +H
Sbjct: 419 LANTMLRAYALGGAPRDALAAFSAM-------PRRDSFTYSFLIKALSAAGVAPVRA-VH 470
Query: 112 GRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
VVK G D F+ N +I Y+ G S+AR +FDE+ E DVV+WN+ + + + GE+
Sbjct: 471 SHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEM-PERDVVSWNTAMAAMVREGEL 529
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI-----------KPS 220
+R+LFD+M ++TVSWN+++ GY + + + A ELF+ M E+N+ K
Sbjct: 530 AGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKG 589
Query: 221 EFTM--------------------------------VSLLNACAKLGAIRQGEWIHNFLV 248
+ M VS+L ACA+ G++ G+ IH ++
Sbjct: 590 DLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVR 649
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNT--VPKKGLSCWNSMVFGLAMNGYENEA 306
+T V A+IDM+CKCGC RA VF+T V K +S WNS++ G AM+G+ ++A
Sbjct: 650 KRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVS-WNSIIGGFAMHGHGDKA 708
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
++LF+ ++ PD ++ I VL+AC H G V++ + YF+ M Y I P I+HY CM+D
Sbjct: 709 LELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMID 768
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR GL++EA LI+SMP +P+ +IWGSLLSACR H N+E A+ A ++ +L + +
Sbjct: 769 LLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGN 828
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
Y ++SN+YA + Q+ + + R+ MK +K G S +E++ HEF G R H + ++
Sbjct: 829 YAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQI 888
Query: 487 YLLLNDLGLLIQEMG 501
+++ L ++ +G
Sbjct: 889 SEMVDRLSSHVKHVG 903
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/448 (37%), Positives = 274/448 (61%), Gaps = 14/448 (3%)
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IRG SQS TP + L+ + +V + +P TY L A+ L R+G Q+HGRVV
Sbjct: 1 MIRGHSQSETPHKLVELY-NRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVAN 59
Query: 118 GLEFDQFIHNTIIYMYANCGF---LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
G + F+ +++ +YA G + +AR +FDE+ + ++V+WNS++ G +CG++D +
Sbjct: 60 GYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEI-VDRNIVSWNSLLAGYVRCGDVDGA 118
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
RR+FD+M RN VSW +MI+G + + K+AL LF EM+ +K + +V+ L+ACA+L
Sbjct: 119 RRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAEL 178
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAI----IDMYCKCGCPERALQVFNTVPKKGLSCW 290
G ++ G WIH+++ N ++ ++ I MY CG ++A +VF + ++ W
Sbjct: 179 GDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISW 238
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQ---SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
SM+ G A G+ EA+ +F +Q + +PD I+FI VL AC+H+G V+Q + +F
Sbjct: 239 TSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFEC 298
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
M + + I P I+HY CMVD L RAG L+EA +LI SMP P+ +WG+LL CR H N E
Sbjct: 299 MNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAE 358
Query: 408 MAKQAAKQI-IELDKNESCGY-VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 465
+A A+++ +EL +++ GY VL+SN+YA + ++++ R M E+ + K G S ++
Sbjct: 359 LASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWVQ 418
Query: 466 VDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
++G VH+FVAG H A VY +L+ +
Sbjct: 419 INGVVHDFVAGDWTHKHASSVYEMLSKI 446
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 140/332 (42%), Gaps = 71/332 (21%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD++ A +F ++ + N+ W T+I G +Q + A+ LF +M + ++ ++ +
Sbjct: 113 GDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMR-RAGVKLDQVALVAA 171
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQ----FIHNTIIYMYANCGFLSEARLMFDEVD 150
A A+LG + G +H + ++ +Q ++N++I+MYA+CG + +A +F +
Sbjct: 172 LSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQ 231
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
+ ++W SMI G AK G + EAL +F+
Sbjct: 232 -QRSTISWTSMITGFAKQGHAE-------------------------------EALGVFQ 259
Query: 211 EMQEQNI---KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAI----- 262
MQ +P T + +L AC+ G + QG H F C +V I
Sbjct: 260 WMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGR--HFF---ECMNKKWGIVPRIEHYGC 314
Query: 263 -IDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
+D+ + G + A ++ ++P K + W +++ G ++ A + L + LKP
Sbjct: 315 MVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELASHVAQKL-ALELKP 373
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
D QA Y L++ Y
Sbjct: 374 D------------------QAAGYLVLLSNVY 387
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLF--IDMLVTSPIQPQRL 89
+ G I+ AY VF +++ + W ++I GF++ A+ +F + L T +P +
Sbjct: 215 ASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGI 274
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH-NTIIYMYANCGFLSEARLMFDE 148
T+ + A + G G + K+ + H ++ + + GFL EA + +
Sbjct: 275 TFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIES 334
Query: 149 VDTEFDVVAWNSMIIG 164
+ + + W +++ G
Sbjct: 335 MPMKPNDAVWGALLGG 350
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 298/541 (55%), Gaps = 39/541 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTII 59
++ L +IH IK+G+ D +++ C D + YA + +P+ F++NT++
Sbjct: 185 LRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLV 244
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S+S P N++ +F++M+ I P ++ + KA A R G Q+H + +K GL
Sbjct: 245 RGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGL 304
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE------------------------FDV 155
+ F+ T+I MY CG + AR +FDE+ FD
Sbjct: 305 DSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREIFDK 364
Query: 156 V------AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
+ +WN M+ G K GE++ ++R+F +M R+ VSW++MI G+ N F E+ F
Sbjct: 365 MLVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYF 424
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
RE+ ++P+E ++ +L+AC++ GA G+ +H F+ + + V A+IDMY +C
Sbjct: 425 RELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRC 484
Query: 270 GCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G A VF + K+ + W SM+ GLAM+G+ EAI++F+ + S + PD ISFI++
Sbjct: 485 GNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISL 544
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC+H+G + + + YF+ M Y I+P+++HY CMVD GR+G L++A I MP P
Sbjct: 545 LYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPP 604
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
AI+W +LL AC HGNIE+A+Q +++ ELD N S VL+SN+YA + ++++ R
Sbjct: 605 TAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRK 664
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGR-------LHPKAPEVYLLLNDLGLLIQEMG 501
M +I+K SL+EV +++F A + H K E+ L L D E+
Sbjct: 665 SMIVQRIKKITAWSLVEVGKTMYKFTACEKKKEIDIEAHEKLKEIILRLRDEAGYAPEVA 724
Query: 502 S 502
S
Sbjct: 725 S 725
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 293/541 (54%), Gaps = 39/541 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTII 59
++ L +IH IK G+ D +++ C D + YA + +P+ F++NT++
Sbjct: 18 LRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLV 77
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S+S P N++ +F++M+ + P ++ + KA R G Q+H + +K GL
Sbjct: 78 RGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGL 137
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE------------------------FDV 155
E F+ T+I MY CG + AR +FDE+ FD
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 156 V------AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
+ +WN M+ G K GE++ ++R+F +M R+ VSW++MI G N F E+ F
Sbjct: 198 MLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYF 257
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
RE+Q + P+E ++ +L+AC++ G+ G+ +H F+ + V A+IDMY +C
Sbjct: 258 RELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 317
Query: 270 GCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G A VF + K+ + W SM+ GLAM+G EA++LF+ + + + PD ISFI++
Sbjct: 318 GNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISL 377
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC+H+G + + +DYF+ M Y I+P I+HY CMVD GR+G L++A I MP P
Sbjct: 378 LHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPP 437
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
AI+W +LL AC HGNIE+A+Q +++ ELD N S VL+SN YA + ++++ R
Sbjct: 438 TAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRK 497
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGR-------LHPKAPEVYLLLNDLGLLIQEMG 501
M +I+K SL+EV +++F AG + H K E+ L L D E+
Sbjct: 498 SMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVA 557
Query: 502 S 502
S
Sbjct: 558 S 558
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 99/230 (43%), Gaps = 22/230 (9%)
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER---ALQVFNT 281
+SLLN+C L A+ Q IH + + ++ +I ++C + A ++
Sbjct: 9 LSLLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLC 64
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK-PDYISFIAVLTACNHSGKVNQ 340
P+ +N++V G + + + ++ +F + PD SF V+ A +
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN---FRS 121
Query: 341 AKDYFTLMTETYK--IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
+ F + + K ++ + + ++ G G +E A K+ M P+ + W ++++
Sbjct: 122 LRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM-HQPNLVAWNAVIT 180
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNES------CGYVLMSNLYAASYQFEE 442
AC + ++ A++ ++ L +N + GY+ L +A F E
Sbjct: 181 ACFRGNDVAGAREIFDKM--LVRNHTSWNVMLAGYIKAGELESAKRIFSE 228
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/501 (36%), Positives = 276/501 (55%), Gaps = 40/501 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
LKK HA + GL D SRIL A I+ A +VF I P F+WN +IR
Sbjct: 736 LKKTHAKIFAYGLQYD----SRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIR 791
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GF+ +++ L+ M+ ++P + +P K+ A L + G +H +V G
Sbjct: 792 GFATDGRFLSSLELYSKMM-EKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCS 850
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ ++ MYA KCG+I+ +R +FDK
Sbjct: 851 NDLFVDAALVDMYA--------------------------------KCGDIEAARLVFDK 878
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VSW SMISGY N E L F M+ + P+ +++S+L AC LGA+R+G
Sbjct: 879 MAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG 938
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
EW H++++ FE + +V TAI+DMY KCG + A +F+ K L CW++M+ ++
Sbjct: 939 EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIH 998
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ +AI LF + + ++P +++F VL+AC+HSG + + K YF LMTE + I + +
Sbjct: 999 GHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSN 1058
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+CMVD LGRAG L EA LI +MP +PDA IWGSLL ACR H N+++A++ A + LD
Sbjct: 1059 YACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLD 1118
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ +VL+SN+YAA ++ E + R +M K G SL+E D +VH+F G R H
Sbjct: 1119 PVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSH 1178
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ ++Y L +L ++ +G
Sbjct: 1179 PQWEKLYAKLEELAAPMKHLG 1199
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/532 (28%), Positives = 265/532 (49%), Gaps = 70/532 (13%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S G + A VF + ++P+ +W +++ G+ Q++ P A+ LF M++ + +T
Sbjct: 150 SKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTL 209
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGL-------------------------------E 120
S+ A AQL + G+ +HG V+++ E
Sbjct: 210 VSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPE 269
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEV------------------------------- 149
D +T+I YAN +EA +F E+
Sbjct: 270 KDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKI 329
Query: 150 -------DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKF 202
E D ++I KC DE+ LF ++ ++ VSW +++SGY +N
Sbjct: 330 HKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMA 389
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAI 262
+++ +FR M I+P +V +L A ++LG +Q +H ++V + F N V ++
Sbjct: 390 YKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASL 449
Query: 263 IDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL-QSSNLKPD 321
I++Y KCG A+++F + + + W+SM+ ++G EA+++F + ++S ++P+
Sbjct: 450 IELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPN 509
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
++F+++L+AC+H+G V + F M Y+++P +H+ MVD LGR G L +A +I
Sbjct: 510 NVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDII 569
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
MP +WG+LL ACR H NIEM + AAK + LD + + Y+L+SN+YA +++
Sbjct: 570 NRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWD 629
Query: 442 EAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
E R +KE ++K G S++EV G VH F+A R HP + ++Y LL L
Sbjct: 630 NVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKL 681
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 126/513 (24%), Positives = 222/513 (43%), Gaps = 84/513 (16%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+ + ++H+ + KTG+ D A+++ + A + A VF + PN+ +WN+ +R
Sbjct: 18 RSVSQLHSQVFKTGILHDTFFATKLNSLYAKCA-SLQAARKVFDETPHPNVHLWNSTLRS 76
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LE 120
+ + + LF M+ T+ P T P KA A L + G +HG K +
Sbjct: 77 YCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIG 136
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ + ++ +Y+ CG + EA +F+E D V W SM+ G + + +E+ LF +
Sbjct: 137 SDMFVGSALVELYSKCGQMGEALKVFEEFQRP-DTVLWTSMVTGYQQNNDPEEALALFSQ 195
Query: 181 MVSRNTVSW----------------------------------------NSMISGYVRNV 200
MV + V NS+++ Y +
Sbjct: 196 MVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTG 255
Query: 201 KFKEALELFREMQEQNI-------------------------------KPSEFTMVSLLN 229
K A LF +M E+++ +P+ T+VS L
Sbjct: 256 CEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQ 315
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
ACA + +G+ IH V FEL+ V TA+IDMY KC CP+ A+ +F +PKK +
Sbjct: 316 ACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVS 375
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
W +++ G A NG +++ +F + S ++PD ++ + +L A + G QA L
Sbjct: 376 WVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQA-----LCL 430
Query: 350 ETYKIKPSIKHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
Y ++ + +++ + G L +A KL + M D +IW S+++A HG
Sbjct: 431 HGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIV-RDVVIWSSMIAAYGIHGR 489
Query: 406 IEMAKQAAKQIIELDKNESCGYVLMSNLYAASY 438
A + Q+++ +S L A S+
Sbjct: 490 GGEALEIFDQMVKNSTVRPNNVTFLSILSACSH 522
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H +++++G + + ++ S G + A +F + ++ IW+++I +
Sbjct: 430 LHGYVVRSGFNSNVFVGASLIEL-YSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHG 488
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
A+ +F M+ S ++P +T+ S+ A + GL +G ++ R+V
Sbjct: 489 RGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMV 537
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 285/469 (60%), Gaps = 7/469 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ LK IHA + L + ++I F SP G ++YA +F+QI +PN F +NT+I
Sbjct: 8 MQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLI 67
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQ----LGLARDGAQLHGRVV 115
RG+S+SS+P ++ LF + + + + P T+ L K ++ L L ++HG V+
Sbjct: 68 RGYSKSSSPSQSVQLF-NQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVL 126
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G F F+ N +I++YA G + A +F+E+ DVV+W+ +++ + GE++ +R
Sbjct: 127 KLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEM-VGADVVSWSGLVVAHVRAGELELAR 185
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
++F +M R+ VSW M+SGY + + +EALELFREM++ ++P E MVS+++AC LG
Sbjct: 186 QVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTSLG 245
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+ G +H ++ N F + A+IDMY KCGC + A QVFN + +K L WNSM+
Sbjct: 246 DLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLITWNSMIS 305
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
A +G +A ++F+ + S ++PD ++F+A+LTA H G V+ F M Y ++
Sbjct: 306 ACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVE 365
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
++HY CMVD LGRAG LEEA KLI SM + ++WG+LL+ACR +G++EM ++ K+
Sbjct: 366 AGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGERVLKK 425
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
+IEL +E Y+L+ ++Y A+ + EA+E R M +K GCS +
Sbjct: 426 LIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 474
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/410 (40%), Positives = 256/410 (62%), Gaps = 4/410 (0%)
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR 143
I P LTYP L KA ++L G +HG V+K G E D+F+ N++I+MY +CG + AR
Sbjct: 6 IYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGDIVYAR 65
Query: 144 LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+FD + ++V+WNSM+ G AKCG +D +R LFD M R+ SW+ +I GY ++ +
Sbjct: 66 KVFDGTPVK-NLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYG 124
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
+A+ +F +M+ K +E TMVS+L ACA LGA+ +G +H +LV N FELN ++ T++I
Sbjct: 125 DAMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLI 184
Query: 264 DMYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
DMY KCG E A VF V K + WN+M+ GLA +G E++ L++ +Q + +KPD
Sbjct: 185 DMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVKESLDLYTEMQIAGIKPD 244
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
I+F+ +L+AC H G V QA F + + + P +HY+CMVD + RAG + EA + +
Sbjct: 245 EITFLCLLSACAHGGLVKQASYVFEGLGKN-GMTPKTEHYACMVDVMARAGQVAEAYQFL 303
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
MP +P A + G+LLS C HG +++A+ K++IELD YV +SN+YA +++
Sbjct: 304 CQMPLEPTASMLGALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNVYAIGRRWD 363
Query: 442 EAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLN 491
EA R M+ ++K PG S +E+ G H F+A + HP + ++Y +L+
Sbjct: 364 EARIMREAMERRGVKKTPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLS 413
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 128/309 (41%), Gaps = 65/309 (21%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT--------- 57
IH H+IK+G D A+ ++ S GDI YA VF NL WN+
Sbjct: 32 IHGHVIKSGFEIDRFVANSLIHMYGS-CGDIVYARKVFDGTPVKNLVSWNSMVDGYAKCG 90
Query: 58 ----------------------IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLF 95
+I G+++S +A+ +F M + P + +T S+
Sbjct: 91 YLDLARGLFDLMPERDVRSWSCLIDGYAKSGNYGDAMAVFEKMRTSGP-KANEVTMVSVL 149
Query: 96 KAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD-TEFD 154
A A LG G +H +V G E + + ++I MYA CG + EA +F V + D
Sbjct: 150 CACAHLGALDKGRMMHQYLVDNGFELNLVLRTSLIDMYAKCGAVEEAFAVFRGVSLRKSD 209
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V+ WN+MI GLA G + KE+L+L+ EMQ
Sbjct: 210 VLIWNAMIGGLATHGLV-------------------------------KESLDLYTEMQI 238
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
IKP E T + LL+ACA G ++Q ++ L N T ++D+ + G
Sbjct: 239 AGIKPDEITFLCLLSACAHGGLVKQASYVFEGLGKNGMTPKTEHYACMVDVMARAGQVAE 298
Query: 275 ALQVFNTVP 283
A Q +P
Sbjct: 299 AYQFLCQMP 307
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 35/229 (15%)
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + I P T L A ++L G IH ++ + FE++ V ++I MY CG
Sbjct: 1 MLQVGIYPDHLTYPFLAKATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGD 60
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN--------------------------- 304
A +VF+ P K L WNSMV G A GY +
Sbjct: 61 IVYARKVFDGTPVKNLVSWNSMVDGYAKCGYLDLARGLFDLMPERDVRSWSCLIDGYAKS 120
Query: 305 ----EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-YKIKPSIK 359
+A+ +F +++S K + ++ ++VL AC H G +++ + + + +++ ++
Sbjct: 121 GNYGDAMAVFEKMRTSGPKANEVTMVSVLCACAHLGALDKGRMMHQYLVDNGFELNLVLR 180
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMP-SDPDAIIWGSLLSACRKHGNIE 407
+ ++D + G +EEA + R + D +IW +++ HG ++
Sbjct: 181 --TSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMIGGLATHGLVK 227
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/433 (39%), Positives = 269/433 (62%), Gaps = 4/433 (0%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S AG ++ A +VF +I +L W TII G+ + A++++ M +++ +P +
Sbjct: 275 SKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSM-ISAGWEPNDVMM 333
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
L + +G QL VVK G + FI +TII++YA CG ++EA L F + +
Sbjct: 334 VDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQF-RIGS 392
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ +V +WN++I G + ID + LF++M R+ SW++MISGY +N + ALELF +
Sbjct: 393 KENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHK 452
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M IKP+E TMVS+L+A A G +++G W H ++ N ++ + AIIDMY KCG
Sbjct: 453 MVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGS 512
Query: 272 PERALQVFNTVPKKG--LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
AL+VF + +K +S WN+++ GLA++G+ N ++K+FS L+ ++K + I+FI VL
Sbjct: 513 INNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVL 572
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
TAC H G V K +F M + I P IKHY CMVD LGRAG LEEAE++IRSMP D
Sbjct: 573 TACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKAD 632
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
+IWG+LL+ACR HGN+++ ++AA+ + L+ + VL+SN+YA + ++E+A R
Sbjct: 633 VVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRA 692
Query: 450 MKEVKIEKEPGCS 462
M+ ++++ PG S
Sbjct: 693 MQSHRMQRLPGYS 705
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 207/423 (48%), Gaps = 36/423 (8%)
Query: 19 DPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM 78
DP++ + +++ +G ++YA +F ++ + T+I GFSQ+ A+ LF M
Sbjct: 131 DPVSYNVMISGYVK-SGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQM 189
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
+ P +T +L AY+ G LHG V+K E + ++ MY C
Sbjct: 190 RNVG-VVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSS 248
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
L EAR +FDE+ E ++V+WN M+ G +K G +D +R +F+++ +++ V+W ++I GYVR
Sbjct: 249 LVEARALFDEM-PEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVR 307
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
+ EAL ++R M +P++ MV L++ C + A+ +G+ + + +V F+ +
Sbjct: 308 VERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFI 367
Query: 259 VTAIIDMYCKCG-------------------------------CPERALQVFNTVPKKGL 287
+ II +Y CG +RA+++FN +P++ +
Sbjct: 368 QSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDV 427
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
W++M+ G N N A++LF + +S +KP+ ++ ++VL+A SG + + + +
Sbjct: 428 FSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGR-WAHE 486
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII-WGSLLSACRKHGNI 406
I S + ++D + G + A ++ + + W +++ HG+
Sbjct: 487 YVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHA 546
Query: 407 EMA 409
++
Sbjct: 547 NLS 549
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 148/278 (53%), Gaps = 6/278 (2%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G Q+H V K GL + FI N++I MY CG L +A+ +FD V D V++N MI G
Sbjct: 85 GKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFD-VCPRSDPVSYNVMISGYV 143
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
K G++D + LFD+M + VS+ +MI G+ +N + +A+ELF++M+ + P+E T+ +
Sbjct: 144 KSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIAT 203
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
L++A + G I +H ++ FE +V T ++ MYC C A +F+ +P+K
Sbjct: 204 LVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKN 263
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
+ WN M+ G + G+ + A +F + + D +++ ++ ++N+A +
Sbjct: 264 IVSWNVMLNGYSKAGFVDSARVVFERIPNK----DLVTWGTIIDGYVRVERINEALMMYR 319
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
M +P+ ++ GR + E ++L+ ++
Sbjct: 320 SMISA-GWEPNDVMMVDLISGCGRTMAMTEGQQLLSAV 356
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 41/235 (17%)
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG---------- 270
E +VS L C+ + QG+ IH + + N + ++I+MY KCG
Sbjct: 66 ELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFD 125
Query: 271 -CP--------------------ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
CP + A ++F+ +P KG + +M+ G + N N+A++L
Sbjct: 126 VCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVEL 185
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
F +++ + P+ ++ +++A +H G + + M IK + + + L
Sbjct: 186 FKQMRNVGVVPNEVTIATLVSAYSHFGGIWACR-----MLHGLVIKMLFEEFVLVSTNLL 240
Query: 370 R----AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
R L EA L MP + + + W +L+ K G ++ A+ ++I D
Sbjct: 241 RMYCVCSSLVEARALFDEMP-EKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKD 294
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 302/532 (56%), Gaps = 40/532 (7%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K L+ A +IKT ++ ++ + C+S ++ A TQ++KPN+F++N +I+G
Sbjct: 794 KLLESALAAMIKTSQTQNCYLMNQFITACSS-FNRLDLAVSFMTQMQKPNVFVYNALIKG 852
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA-QLGLARDGAQLHGRVVKQGLE 120
F S P ++ ++ ML S + P TY SL +A A G G L + K G
Sbjct: 853 FVTCSHPIRSLEFYVRMLRDS-VSPSSYTYSSLVQASAFASGF---GESLQAHIWKFGFG 908
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV------------------------ 156
F I T+I Y+ G + EAR +FDE+ DV
Sbjct: 909 FHVQIQTTLIGFYSASGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLANQM 968
Query: 157 ------AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
WN +I G + G ++ + LF++M ++ +SW +MI+GY RN +++EA+ +F
Sbjct: 969 PEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFY 1028
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M E+ I P E TM ++++ACA LG + G+ +H + V N F L+ + +A++DMY KCG
Sbjct: 1029 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCG 1088
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
ERAL VF +PKK L CWNS++ GLA +G+ EA+K+F+ ++ ++KP+ ++F++V T
Sbjct: 1089 SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFT 1148
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC H+G V + + + M + Y I +++HY CMV +AGL+ EA +LI SM +P+A
Sbjct: 1149 ACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNA 1208
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
+IWG+LL CR H N+E+A+ A +++ L+ S Y L+ ++YA ++ + E R M
Sbjct: 1209 VIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRM 1268
Query: 451 KEVKIEKE-PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+E+ IEK PG S I +D H F A + H + EV LLL++ + ++MG
Sbjct: 1269 RELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDE---IYEQMG 1317
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/450 (40%), Positives = 268/450 (59%), Gaps = 13/450 (2%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ G ++ A +F I ++ W T+I G+ Q R A+ ++ ML T P +
Sbjct: 262 AKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGH-GPNEVMI 320
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
+L A + DG QLHG VVK+G + FI TIIY YA CG + A L F EV
Sbjct: 321 VNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQF-EVGV 379
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ + +WN++ G K G +D + + FDKM R+ SW++MISGY ++ K ALELF +
Sbjct: 380 KDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHK 439
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M IKP+E TMVS+ +A A LG +++G+ H ++ + N + A+IDMY KCG
Sbjct: 440 MLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGS 499
Query: 272 PERALQVFNTVPKK--GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
ALQ FN + + +S WN+++ GLA +G+ + +++FS +Q ++KP+ I+FI VL
Sbjct: 500 INSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVL 559
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
+AC H+G V K F M Y ++P IKHY CM+D LGRAGLLEEAE++IRSMP + D
Sbjct: 560 SACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEAD 619
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
+IWG+LL+ACR HGN+ + ++AA+ + L + G VL+SN+YA + ++EE R +
Sbjct: 620 IVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSV 679
Query: 450 MKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
M+ +++EPG S FVAG L
Sbjct: 680 MQGQTMDREPGYS---------GFVAGSDL 700
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 167/313 (53%), Gaps = 6/313 (1%)
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
P++ I +F + L S K+ + L G Q+H + K GL F+ FI N
Sbjct: 33 PQHFIHIFTNARNHQNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQN 92
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
++I MYA CG + A+L+FD T D V+ N M+ G + G+ID +R+LFD M ++ V
Sbjct: 93 SLINMYAKCGDIKNAQLLFDGFAT-LDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCV 151
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
S+ +MI G+V+N F+EALE+F++M+ + P++ T+V++++AC+ LG + +H +
Sbjct: 152 SYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLV 211
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
V IV T ++ YC C A ++F+ +P++ L WN M+ G A G +EA
Sbjct: 212 VKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEAR 271
Query: 308 KLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
+LF G+ D IS+ ++ G++ +A + + M +T P+ +V A
Sbjct: 272 ELFDGI----CDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGH-GPNEVMIVNLVSA 326
Query: 368 LGRAGLLEEAEKL 380
GR + + +L
Sbjct: 327 CGRGTAIVDGWQL 339
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 203/439 (46%), Gaps = 39/439 (8%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
D+K +A L+ G A + I+ G I+ A +F + + T+I GF
Sbjct: 103 DIK--NAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGF 160
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
Q+ R A+ +F DM + + P LT ++ A + LG + +HG VVK +
Sbjct: 161 VQNGFFREALEVFKDMR-SCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGL 219
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ +++ Y C + EAR +FDE+ E ++V WN M+ G AK G +DE+R LFD +
Sbjct: 220 VIVSTNLMHAYCLCSGVREARRLFDEM-PERNLVTWNVMLNGYAKTGLVDEARELFDGIC 278
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
++ +SW +MI GY++ + +EALE++R M + P+E +V+L++AC + AI G
Sbjct: 279 DKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQ 338
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H +V F+ + T II Y CG + A F K L WN++ G NG
Sbjct: 339 LHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGM 398
Query: 303 ENEAIK-------------------------------LFSGLQSSNLKPDYISFIAVLTA 331
+ A+K LF + + +KP+ ++ ++V +A
Sbjct: 399 MDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSA 458
Query: 332 CNHSGKVNQAKDYFTLM-TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
G + + K M +E+ +++ + ++D + G + A + + + +
Sbjct: 459 IATLGTLQEGKLAHEYMRSESIPFNDNLR--AALIDMYAKCGSINSALQFFNQIRDEVSS 516
Query: 391 II-WGSLLSACRKHGNIEM 408
+ W +++ HG+ M
Sbjct: 517 VSPWNAIICGLASHGHASM 535
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 285/469 (60%), Gaps = 7/469 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ LK IHA + L + ++I F SP G ++YA +F+QI +PN F +NT+I
Sbjct: 195 MQALKLIHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLI 254
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQ----LGLARDGAQLHGRVV 115
RG+S+SS+P ++ LF + + + + P T+ L K ++ L L ++HG V+
Sbjct: 255 RGYSKSSSPSQSVQLF-NQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVL 313
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G F F+ N +I++YA G + A +F+E+ DVV+W+ +++ + GE++ +R
Sbjct: 314 KLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEM-VGADVVSWSGLVVAHVRAGELELAR 372
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
++F +M R+ VSW M+SGY + + +EALELFREM++ ++P E MVS+++AC LG
Sbjct: 373 QVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTSLG 432
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+ G +H ++ N F + A+IDMY KCGC + A QVFN + +K L WNSM+
Sbjct: 433 DLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLITWNSMIS 492
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
A +G +A ++F+ + S ++PD ++F+A+LTA H G V+ F M Y ++
Sbjct: 493 ACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVE 552
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
++HY CMVD LGRAG LEEA KLI SM + ++WG+LL+ACR +G++EM ++ K+
Sbjct: 553 AGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGERVLKK 612
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
+IEL +E Y+L+ ++Y A+ + EA+E R M +K GCS +
Sbjct: 613 LIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 661
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/357 (18%), Positives = 150/357 (42%), Gaps = 66/357 (18%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF------ 222
GE++ R++ K + VSW M+S Y + + +E LELFRE+++ ++P++
Sbjct: 103 GELELPRQVMMKYL--GDVSWTVMVSMYAQAKRSREPLELFREIRDVRVRPTDVVTMGVD 160
Query: 223 -----------------------TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV 259
++ S+ AC + A++ IH + +V+
Sbjct: 161 YDKYKTLKSYISNKVMHMLPTSQSLASMAEACLTMQALKL---IHALAFRANLHHHALVL 217
Query: 260 TAIIDMYCKC--GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN 317
I GC A ++F+ + + +N+++ G + + +++++LF+ ++ +
Sbjct: 218 AKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNC 277
Query: 318 LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY---------SCMVDAL 368
+ PD +F +L G+ D L+ + +I ++ + ++
Sbjct: 278 VDPDGFTFTFLL-----KGRSRMRID-LPLIVASDEIHGAVLKLGFCFHLFVMNALIHLY 331
Query: 369 GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYV 428
G+ A ++ M D + W L+ A + G +E+A+Q E+ + + +
Sbjct: 332 AARGVPAAAHQVFNEMVG-ADVVSWSGLVVAHVRAGELELARQV---FYEMPERDVVSWT 387
Query: 429 LMSNLYAASYQFEEAMEERLLMKEVKIEKE--------PGCSL---IEVDGEVHEFV 474
+M + YA + + EA+E M++V + + C+ +E EVH ++
Sbjct: 388 VMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYI 444
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 282/460 (61%), Gaps = 1/460 (0%)
Query: 42 LVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL 101
L+ +Q ++ W ++I +S+++ R A+ F ML + I P +T ++ A A+L
Sbjct: 194 LLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML-SHGIAPDEVTVIAVLSACAKL 252
Query: 102 GLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM 161
G LH V ++G+ + + +I MYA CG A+ +FD + +WN++
Sbjct: 253 KDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAI 312
Query: 162 IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSE 221
I G K G +D +R LFD+M R+ +++NSM++GY+ + + +EAL LF M+ +++
Sbjct: 313 IDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDN 372
Query: 222 FTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
FT+V+LL ACA LGA++QG +H + E + + TA++DMY KCG + A VF
Sbjct: 373 FTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQR 432
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+ K+ + W +M+ GLA NG A++ F ++ +P+ +S+IAVLTAC+HS +N+
Sbjct: 433 MGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEG 492
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
+ YF M Y I P I+HY CM+D LGR+GLL+EA L+++MP P+A+IW S+LSACR
Sbjct: 493 RLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACR 552
Query: 402 KHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGC 461
H +I++A+ AA+ +++L+ +E YV + N+Y S Q+E A + R+LM+E +++K G
Sbjct: 553 VHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGY 612
Query: 462 SLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
S I V G+VH+FV + HP+ E+ +L ++ ++ +G
Sbjct: 613 SSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLG 652
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 215/461 (46%), Gaps = 50/461 (10%)
Query: 1 MKDLKKIHAHLIKTG-LAKDPIAASRIL---AFCTSPAG-DINYAYLVFTQIKKPNLFIW 55
++ ++HA L +G L P +A +L C P + YA +F ++ P+ F++
Sbjct: 12 VRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMP-PSTFLF 70
Query: 56 NTIIRGFSQS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD---GAQLH 111
+T +R S++ S P LLF M + ++P T+ LFK + LH
Sbjct: 71 DTALRACSRAGSDPHRPFLLFRRMR-RAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLH 129
Query: 112 GRVVKQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
++ L F+ N++I+MY G ++AR FDE+ + D VAW +I GLAK G
Sbjct: 130 AACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVK-DAVAWTMLISGLAKMGM 188
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
+ +++ L + R+ +SW S+I+ Y R + +EA+ F+ M I P E T++++L+A
Sbjct: 189 LCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSA 248
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK------ 284
CAKL + G +H + + +V A+IDMY KCG A QVF+ + +
Sbjct: 249 CAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQS 308
Query: 285 --------------------------KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
+ + +NSM+ G +G EA+ LF ++ +L
Sbjct: 309 WNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDL 368
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
+ D + + +LTAC G + Q + + E ++ I + ++D + G ++EA
Sbjct: 369 RVDNFTVVNLLTACASLGALQQGRALHACI-EQRLVEADIYLGTALLDMYMKCGRVDEAT 427
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
+ + M D W ++++ +G M K A + ++
Sbjct: 428 IVFQRM-GKRDVHTWTAMIAGLAFNG---MGKAALEHFYQM 464
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 299/560 (53%), Gaps = 64/560 (11%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +I A ++ GL + A + C S I++A +F +I +PN WN + RG+
Sbjct: 28 LHQIQAQIVTHGLEHNDFVAPNFITTC-SRFKRIHHARKLFDKIPQPNTATWNAMFRGYL 86
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
Q+ R+ ++LF ++ + + P T+P + K+ +L R+G ++H K G + +
Sbjct: 87 QNGHHRDTVVLFGELNRIAGM-PNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNS 145
Query: 124 F-------------------------------IHNTIIYMYANCGFLSEARLMFD---EV 149
F + II Y CG + R +FD E
Sbjct: 146 FVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPER 205
Query: 150 DTEF---------------------------DVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
D D ++WN+M+ G A GE++ ++FD+M
Sbjct: 206 DVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMP 265
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
RN SWN +I GYV+N F E LE F+ M E ++ P++FT+V++L+AC++LGA+ G+
Sbjct: 266 ERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGK 325
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
W+H + + ++ N V +IDMY KCG E A+ VFN + +K + WN+++ GLA++G
Sbjct: 326 WVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHG 385
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ +A+ +F ++S +PD ++F+ +L+AC H G V YF M + Y I P I+HY
Sbjct: 386 HAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHY 445
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD LGRAGLL++A IR MP +PDA+IW +LL ACR + N+E+A+ A +++IEL+
Sbjct: 446 GCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEP 505
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
N +V++SN+Y + E+ ++ M++ K PGCS+IE + V EF + H
Sbjct: 506 NNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHS 565
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
+ +Y +L L +L++ G
Sbjct: 566 ETESIYRVLKGLTMLLRSHG 585
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 100/226 (44%), Gaps = 9/226 (3%)
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
E ++LL +C + Q I +VT+ E N V I + A ++F+
Sbjct: 12 EEKFITLLRSCKNYERLHQ---IQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFD 68
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
+P+ + WN+M G NG+ + + LF L P+ +F ++ +C V +
Sbjct: 69 KIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVRE 128
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSAC 400
++ T+ + K + + ++D + G +E+A K+ M + + ++W ++++
Sbjct: 129 GEEVHCCATK-HGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEM-HERNVVVWTAIINGY 186
Query: 401 RKHGNIEMAKQ----AAKQIIELDKNESCGYVLMSNLYAASYQFEE 442
G++ ++ A ++ + + GY+ N+ AA F++
Sbjct: 187 ILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDK 232
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 291/497 (58%), Gaps = 23/497 (4%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
++ ++IH H++K G D + ++A G A VF Q ++ + +I+G
Sbjct: 120 REGQQIHGHVLKLGCDLDLYVHTSLIAMYVK-NGRXEDARKVFDQSSHRDVVSYTALIKG 178
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++ + +A +F ++ V + ++ +L YA+ G ++ +L ++K ++
Sbjct: 179 YASNGYIXSAQKMFDEIPVKDVV-----SWNALISGYAETGNYKEALELFKEMMKTNVKP 233
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVD-----TEFDVVAWNSMIIGLAKCGEIDESRR 176
D+ T++ A + R + +D + +V N++I KCGE++ +
Sbjct: 234 DESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIV--NALIDLYIKCGEVETASG 291
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
LF+ + ++ +SWN++I GY +KEAL LF+EM P+E TM+S+L ACA LGA
Sbjct: 292 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGA 351
Query: 237 IRQGEWIHNFL------VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
I G WIH ++ V+N L T ++IDMY KCG E A QVF+++ + LS W
Sbjct: 352 IDIGRWIHVYIDKRLKGVSNPSSLRT----SLIDMYAKCGDIEAAQQVFDSMLNRSLSSW 407
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N+M+FG AM+G N A +FS ++ ++PD I+F+ +L+AC+HSG ++ + F MTE
Sbjct: 408 NAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTE 467
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
YKI P ++HY CM+D LG +GL +EAE++I SM DPD +IW SLL AC+ HGN+E+ +
Sbjct: 468 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGE 527
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
A+ +I+++ S YVL+SN+YA + ++ E + R L+ + ++K PGCS IE+D V
Sbjct: 528 SFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVV 587
Query: 471 HEFVAGGRLHPKAPEVY 487
HEF+ G +LHP+ E+Y
Sbjct: 588 HEFIIGDKLHPRNREIY 604
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 287/540 (53%), Gaps = 51/540 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGD-INYAYLVFTQIKKPNLFIWNTI 58
++ L+ IHA +IKTGL A S+++ F SP D + YA VF I++PNL IWNT+
Sbjct: 15 LQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTM 74
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG + SS P +A+ L++ M ++ + P T+P L KA A+ R+G Q+HG V+K G
Sbjct: 75 FRGHALSSDPVSALYLYVCM-ISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLG 133
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ D ++H ++I MY G +AR +FD+ + DVV++ ++I G A G I ++++F
Sbjct: 134 CDLDLYVHTSLIAMYVKNGRXEDARKVFDQ-SSHRDVVSYTALIKGYASNGYIXSAQKMF 192
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D++ ++ VSWN++ISGY +KEALELF+EM + N+KP E TMV++L+ACA+ +I
Sbjct: 193 DEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIE 252
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G +H+++ + F N +V A+ID+Y KCG E A +F + K + WN+++ G
Sbjct: 253 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYT 312
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK--IKP 356
EA+ LF + S P+ ++ +++L AC H G ++ + + + K P
Sbjct: 313 HMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNP 372
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSM----------------------PS-------- 386
S S ++D + G +E A+++ SM P+
Sbjct: 373 SSLRTS-LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMR 431
Query: 387 ----DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK--NESCGYVLMSNLYAASYQF 440
+PD I + LLSAC G +++ + + + E K + Y M +L S F
Sbjct: 432 KDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLF 491
Query: 441 EEAMEERLLMKEVKIEKEPGCSLIEV-----DGEVHEFVAGG--RLHPKAPEVYLLLNDL 493
+EA EE + E+ + CSL++ + E+ E A ++ PK Y+LL+++
Sbjct: 492 KEA-EEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNI 550
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/467 (38%), Positives = 279/467 (59%), Gaps = 63/467 (13%)
Query: 89 LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN------------- 135
+TYP + KA + + G +H VVK G E D +I N++I++YAN
Sbjct: 1 MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60
Query: 136 C------------------GFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
C G + R++FD + DV++WN++I G A G+IDE++RL
Sbjct: 61 CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCR-DVISWNTIINGYAIVGKIDEAKRL 119
Query: 178 FDKMVSRNTVSWNSMISGYVR--NV-----------------------------KFKEAL 206
FD+M RN VSWNSM+SG+V+ NV K EAL
Sbjct: 120 FDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEAL 179
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
LF +M+ +KP+E T+VSLL+ACA LGA+ +G +H ++ N E+N+IV TA++DMY
Sbjct: 180 ALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMY 239
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG A QVFN + K + WN+++ G+A++G+ EA +LF ++ ++++P+ I+F+
Sbjct: 240 AKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFV 299
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
A+L+AC+H+G V++ + M+ +Y I+P ++HY C++D L RAGLLEEA +LI +MP
Sbjct: 300 AMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPM 359
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
+P+ G+LL CR HGN E+ + K++I L S Y+L+SN+YAA+ ++++A +
Sbjct: 360 EPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKV 419
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
R LMK I K PG S+IE+ G VH FVAG HP++ ++Y LN++
Sbjct: 420 RNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEI 466
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 175/386 (45%), Gaps = 85/386 (22%)
Query: 7 IHAHLIKTGL----------------AKDPIAASRILAFCTS--------------PAGD 36
+H H++K+G KD AA ++ + C+ G+
Sbjct: 22 VHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGE 81
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYPSL 94
+ + +VF ++ ++ WNTII G++ A LF +M P+R +++ S+
Sbjct: 82 MGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEM-------PERNLVSWNSM 134
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV----- 149
+ + G + L + + D N+++ YA CG +EA +FD++
Sbjct: 135 LSGFVKCGNVEEAFGLFSEMPCR----DVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 190
Query: 150 -DTEFDVVAWNSM--------------------------IIGL------AKCGEIDESRR 176
TE VV+ S I+G AKCG+I + +
Sbjct: 191 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 250
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+ M S++ ++WN++I+G + KEA +LF+EM+E +++P++ T V++L+AC+ G
Sbjct: 251 VFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGM 310
Query: 237 IRQGEWIHNFLVTN-CFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMV 294
+ +G+ + + + ++ E +ID+ + G E A+++ T+P + S +++
Sbjct: 311 VDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALL 370
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKP 320
G ++G N + G + NL+P
Sbjct: 371 GGCRIHG--NFELGEMVGKRLINLQP 394
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/463 (38%), Positives = 266/463 (57%), Gaps = 3/463 (0%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +IHAH ++ GL S ++ CTS I YA +F PN+ ++N+II+ S
Sbjct: 25 LPQIHAHFLRHGLHHSNQILSHFVSVCTS-LHQIPYATTIFNHTHHPNILLFNSIIKAHS 83
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ F M +T I P T+P L KA + L G LH V G
Sbjct: 84 SFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLHAHVTALGFYRHS 143
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ ++ +Y+NCG + +A +FDE+ +VV WN MI G K G+++ +LF +M
Sbjct: 144 PVEIGLLEVYSNCGKMEDANKVFDEM-LHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQ 202
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ VSWN MIS + K EA +FREM EQ +P + T+V++L CA+LG + GEWI
Sbjct: 203 RSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWI 262
Query: 244 HNFLVTNCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
H++ I V +++D YCKCG E A +VFN + KK + WN+M+ GL +NG
Sbjct: 263 HSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGK 322
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
++LF + + P +F+ VL C H+G V++ ++ F MT +K+ P ++HY
Sbjct: 323 GELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYG 382
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C+VD LGR G ++EA LIR+MP P+A +WG+LLSACR HG+ E+A+ AAK+++ L+
Sbjct: 383 CVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRLEPG 442
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 465
S YVL+SN+YA ++ E + R+LM+ V I+K PG S ++
Sbjct: 443 NSGNYVLLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQSALQ 485
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/527 (33%), Positives = 295/527 (55%), Gaps = 38/527 (7%)
Query: 10 HLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPR 69
+L L +D + + +L+ + +G I F ++ + +NT I GFS +S P+
Sbjct: 79 NLFDKMLKRDIFSWNALLS-AYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQ 137
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
++ LF M +P T S+ A AQL R G Q+HG ++ + + FI N +
Sbjct: 138 ESLELFKRM-QREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNAL 196
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK---------------------- 167
MYA CG + +AR +FD + T+ ++V+WN MI G AK
Sbjct: 197 TDMYAKCGEIEQARWLFDCL-TKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPD 255
Query: 168 -------------CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
CG +DE+RR+F + ++ V W +M+ GY +N + ++AL LF EM
Sbjct: 256 QVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLL 315
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
++I+P +T+ S++++CAKL ++ G+ +H + N +V +A+IDMY KCG +
Sbjct: 316 EHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDD 375
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VFN +P + + WN+M+ G A NG++ +A++LF + KPD ++FI +L+AC H
Sbjct: 376 ARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLH 435
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+ Q ++YF +T + + P++ HY+CMV+ LGR G +E+A LI++M DPD +IW
Sbjct: 436 CNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWS 495
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
+LLS C G+I A+ AA+ + ELD + Y+++SN+YA+ ++++ R LMK
Sbjct: 496 TLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKN 555
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++K G S IE+D EVH F + R HP++ ++Y LN L +QE G
Sbjct: 556 VKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEG 602
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 162/284 (57%), Gaps = 9/284 (3%)
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+HN ++++YA G L +A+ +FD++ + D+ +WN+++ AK G I + FD+M
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKM-LKRDIFSWNALLSAYAKSGSIQNLKATFDRM 115
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R++VS+N+ I+G+ N +E+LELF+ MQ + +P+E+T+VS+LNA A+L +R G+
Sbjct: 116 PFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGK 175
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH ++ F N + A+ DMY KCG E+A +F+ + KK L WN M+ G A NG
Sbjct: 176 QIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNG 235
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ I L ++ S PD ++ ++ A G+V++A+ F+ E I +
Sbjct: 236 QPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-----KDIVCW 290
Query: 362 SCMVDALGRAGLLEEAEKLIRSM---PSDPDAIIWGSLLSACRK 402
+ M+ + G E+A L M +PD+ S++S+C K
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAK 334
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 288/497 (57%), Gaps = 29/497 (5%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++HA + K+ + D S ++ S G + A VF+ + + NL WN++I + Q+
Sbjct: 168 QVHALVSKSRYSTDVYMGSALIDM-YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQN 226
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQF 124
A+ +F+ M+ S ++P +T S+ A A L ++G Q+H RVVK D
Sbjct: 227 GPASEALEVFVRMM-DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MYA C ++EAR +FD + +VV+ SM+ G A+ + +R +F KM R
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDRMSIR-NVVSETSMVSGYARAASVKAARFMFSKMTQR 344
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSWN++I+GY +N + +EAL LFR ++ ++I P+ +T +LL +
Sbjct: 345 NVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKS-------------- 390
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ V ++IDMY KCG E +VF + ++ WN+++ G A NGY
Sbjct: 391 ----------DIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGA 440
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+++F + KPD+++ I VL AC+H+G V + + YF M E + + P HY+CM
Sbjct: 441 EALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCM 499
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L EA+ LI +MP +PDA++WGSLL+AC+ HGNIEM K AA++++E+D S
Sbjct: 500 VDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNS 559
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+SN+YA ++ + + R LM++ + K+PGCS IEV+ VH F+ + HP
Sbjct: 560 GPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRK 619
Query: 485 EVYLLLNDLGLLIQEMG 501
++Y +L L ++ +G
Sbjct: 620 QIYSVLKMLTEQMKRVG 636
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 172/332 (51%), Gaps = 2/332 (0%)
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
LV P + L + + AR +H R++ + FI N +I +Y C
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
L +AR +FD + + + WNS+I L K G +DE+ RLF M + SWNSM+SG+ +
Sbjct: 66 LDDARKLFDRM-PQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQ 124
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
+ +F+E+LE F +M ++ +E++ S L+ACA L + G +H + + + + +
Sbjct: 125 HDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYM 184
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
+A+IDMY KCG A +VF+ + ++ L WNS++ NG +EA+++F + S L
Sbjct: 185 GSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGL 244
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
+PD ++ +V++AC + + + +T K + + + +VD + + EA
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
++ M S + + S++S + +++ A+
Sbjct: 305 RVFDRM-SIRNVVSETSMVSGYARAASVKAAR 335
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 204/430 (47%), Gaps = 35/430 (8%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+HA ++ T + + +R++ ++ A +F ++ + N F WN++I ++S
Sbjct: 37 VHARILMTQFSMEIFIQNRLIDV-YGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSG 95
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A LF M P +P + ++ S+ +AQ + + ++ ++ +++
Sbjct: 96 FLDEAARLFGSM----P-EPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSF 150
Query: 127 NTII-----YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ + M N G ++ + + DV +++I +KCG + + +F M
Sbjct: 151 GSALSACAGLMDLNMG--TQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGM 208
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+ RN V+WNS+I+ Y +N EALE+F M + ++P E T+ S+++ACA L A+++G
Sbjct: 209 IERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGL 268
Query: 242 WIHNFLV-TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
IH +V TN F + ++ A++DMY KC A +VF+ + + + SMV G A
Sbjct: 269 QIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARA 328
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
A +FS + N+ +S+ A++ +G+ +A F L+ I P+ H
Sbjct: 329 ASVKAARFMFSKMTQRNV----VSWNALIAGYTQNGENEEALRLFRLLKRE-SIWPT--H 381
Query: 361 YS-------------CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
Y+ ++D + G +E+ ++ M + D + W +++ ++G
Sbjct: 382 YTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKM-KERDCVSWNAIIVGYAQNGYGA 440
Query: 408 MAKQAAKQII 417
A Q ++++
Sbjct: 441 EALQIFRKML 450
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 159/398 (39%), Gaps = 91/398 (22%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K+ +IHA ++KT +D + L + +N A VF ++ N+ +++
Sbjct: 264 LKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVS 323
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-- 118
G++++++ + A +F M Q +++ +L Y Q G + +L R++K+
Sbjct: 324 GYARAASVKAARFMFSKM-----TQRNVVSWNALIAGYTQNGENEEALRLF-RLLKRESI 377
Query: 119 ----------LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
L+ D F+ N++I MY CG + + +F+++ E D V+WN++I+G
Sbjct: 378 WPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKM-KERDCVSWNAIIVG---- 432
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
Y +N EAL++FR+M KP TM+ +L
Sbjct: 433 ---------------------------YAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVL 465
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCPERALQVFNTVPKKG 286
AC+ G + +G H F L + T ++D+ + GC A + +P
Sbjct: 466 CACSHAGLVEEGR--HYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMP--- 520
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
+ PD + + ++L AC G + K
Sbjct: 521 -------------------------------VNPDAVVWGSLLAACKVHGNIEMGKHAAE 549
Query: 347 LMTET--YKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
+ E + P + S M LGR G + KL+R
Sbjct: 550 KLLEIDPWNSGPYVL-LSNMYAELGRWGDVVRVRKLMR 586
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 282/460 (61%), Gaps = 1/460 (0%)
Query: 42 LVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL 101
L+ +Q ++ W ++I +S+++ R A+ F ML + I P +T ++ A A+L
Sbjct: 194 LLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML-SHGIAPDEVTVIAVLSACAKL 252
Query: 102 GLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM 161
G LH V ++G+ + + +I MYA CG A+ +FD + +WN++
Sbjct: 253 KDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAI 312
Query: 162 IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSE 221
I G K G +D +R LFD+M R+ +++NSM++GY+ + + +EAL LF M+ +++
Sbjct: 313 IDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDN 372
Query: 222 FTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
FT+V+LL ACA LGA++QG +H + E + + TA++DMY KCG + A VF
Sbjct: 373 FTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQR 432
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+ K+ + W +M+ GLA NG A++ F ++ +P+ +S+IAVLTAC+HS +N+
Sbjct: 433 MGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEG 492
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
+ YF M Y I P I+HY CM+D LGR+GLL+EA L+++MP P+A+IW S+LSACR
Sbjct: 493 RLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACR 552
Query: 402 KHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGC 461
H +I++A+ AA+ +++L+ +E YV + N+Y S Q+E A + R+LM+E +++K G
Sbjct: 553 VHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGY 612
Query: 462 SLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
S I V G+VH+FV + HP+ E+ +L ++ ++ +G
Sbjct: 613 SSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLG 652
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 183/359 (50%), Gaps = 18/359 (5%)
Query: 1 MKDLKKIHAHLIKTG-LAKDPIAASRIL---AFCTSPAG-DINYAYLVFTQIKKPNLFIW 55
++ ++HA L +G L P +A +L C P + YA +F ++ P+ F++
Sbjct: 12 VRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMP-PSTFLF 70
Query: 56 NTIIRGFSQS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD---GAQLH 111
+T +R S++ S P LLF M + ++P T+ LFK + LH
Sbjct: 71 DTALRACSRAGSDPHRPFLLFRRMR-RAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLH 129
Query: 112 GRVVKQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
++ L F+ N++I+MY G ++AR FDE+ + D VAW +I GLAK G
Sbjct: 130 AACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVK-DAVAWTMLISGLAKMGM 188
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
+ +++ L + R+ +SW S+I+ Y R + +EA+ F+ M I P E T++++L+A
Sbjct: 189 LCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSA 248
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL-SC 289
CAKL + G +H + + +V A+IDMY KCG A QVF+ + +
Sbjct: 249 CAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQS 308
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN+++ G +G+ + A LF ++ D I+F +++T HSG++ +A F M
Sbjct: 309 WNAIIDGYCKHGHVDVARSLFDEMEVR----DIITFNSMMTGYIHSGQLREALLLFMSM 363
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/451 (37%), Positives = 263/451 (58%), Gaps = 6/451 (1%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA---YAQLGLARDGAQLH 111
W T I + +S A F+ M + I+P +T+ +L A Y G +H
Sbjct: 59 WTTSIADYCKSGHLVKAASKFVQMR-EAAIEPNHITFITLLSACAHYPSRSSISFGTAIH 117
Query: 112 GRVVKQGLEF-DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
V K GL+ D + +I MYA CG + ARL FD++ ++V+WN+MI G + G+
Sbjct: 118 AHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVR-NLVSWNTMIDGYMRNGK 176
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
+++ ++FD + +N +SW ++I G+V+ +EALE FREMQ + P T+++++ A
Sbjct: 177 FEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAA 236
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA LG + G W+H ++T F N V ++IDMY +CGC + A QVF+ +P++ L W
Sbjct: 237 CANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSW 296
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
NS++ G A+NG +EA+ F+ +Q KPD +S+ L AC+H+G + + F M
Sbjct: 297 NSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKR 356
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
+I P I+HY C+VD RAG LEEA ++++MP P+ +I GSLL+ACR GNI +A+
Sbjct: 357 VRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLAE 416
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
+IELD YVL+SN+YAA +++ A + R MKE I+K+PG S IE+D +
Sbjct: 417 NVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSIEIDSSI 476
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
H+FV+G + H + +Y L L +Q G
Sbjct: 477 HKFVSGDKSHEEKDHIYAALEFLSFELQLCG 507
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 37/246 (15%)
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL---GAIRQGEWI 243
VSW + I+ Y ++ +A F +M+E I+P+ T ++LL+ACA +I G I
Sbjct: 57 VSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTAI 116
Query: 244 HNFLVTNCFELNTIVV-TAIIDMYCKCGCPER---------------------------- 274
H + ++N ++V TA+IDMY KCG E
Sbjct: 117 HAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGK 176
Query: 275 ---ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
ALQVF+ +P K W +++ G Y EA++ F +Q S + PDY++ IAV+ A
Sbjct: 177 FEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAA 236
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C + G + + + T + ++K + ++D R G ++ A ++ MP +
Sbjct: 237 CANLGTLGLGL-WVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQR-TLV 294
Query: 392 IWGSLL 397
W S++
Sbjct: 295 SWNSII 300
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 123/310 (39%), Gaps = 63/310 (20%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHAH+ K GL + + L + G + A L F Q+ NL WNT+I G+ ++
Sbjct: 116 IHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNG 175
Query: 67 TPRNAILLFIDMLVT------------------------------SPIQPQRLTYPSLFK 96
+A+ +F + V S + P +T ++
Sbjct: 176 KFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIA 235
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A LG G +H V+ Q + + N++I MY+ CG + AR +FD + + +V
Sbjct: 236 ACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRM-PQRTLV 294
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G D EAL F MQE+
Sbjct: 295 SWNSIIVGFAVNGLAD-------------------------------EALSYFNSMQEEG 323
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV-VTAIIDMYCKCGCPERA 275
KP + L AC+ G I +G I + L I ++D+Y + G E A
Sbjct: 324 FKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEA 383
Query: 276 LQVFNTVPKK 285
L V +P K
Sbjct: 384 LNVLKNMPMK 393
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/506 (36%), Positives = 293/506 (57%), Gaps = 48/506 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ K+IHAH+IKT A +I P D Q WN +I
Sbjct: 91 LEQTKQIHAHIIKTHFHH----ALQI------PLNDFPSGLSPSAQ--------WNFVIT 132
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+++ + PRNA+ ++ L + PS+ KA Q+ + G ++HG V+K+GL+
Sbjct: 133 SYTKRNQPRNALNVYAQ-LRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLD 191
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL----AKCGEIDESRR 176
D F+ N ++ MY C + ARL+FD++ E DVV+W L AKCG + +R+
Sbjct: 192 RDVFVGNALMLMYGECACVEYARLVFDKM-MERDVVSWIPTTTALLDMYAKCGHLGLARQ 250
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
LF+ + + VSW +MI+G +R+ + +E +LF MQE+NI P+E TM++
Sbjct: 251 LFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLN---------- 300
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
E++ I+ TA++DMY KCG A ++F + + WN+++ G
Sbjct: 301 ------------KERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITG 348
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
AM+GY EA+ +F+ ++ +KP+ I+FI +L AC+H+G V + K F M T+ + P
Sbjct: 349 FAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVP 408
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
I+HY CMVD LGRAGLL+EA ++I+SMP P+ I+WG+L++ACR H N ++ + AA Q+
Sbjct: 409 QIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQL 468
Query: 417 IELDKNESCGY-VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+E++ E+CGY VLMSN+YAA+ ++ +A R MK V ++KEPG S+IEV+G VHEF+
Sbjct: 469 LEIEP-ENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLM 527
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQEMG 501
G + HP+ + +L ++ + E G
Sbjct: 528 GDQSHPQIRRINEMLAEMRRKLNEAG 553
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 188/558 (33%), Positives = 297/558 (53%), Gaps = 69/558 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTS--PAGDINYAYLVFTQIKKPNLFIWNTI 58
++ ++IHA L+ +GL D S+++ F + GD YL + + F +N++
Sbjct: 18 LRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNTRLGS-FPFNSL 76
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
I G+ P+ A+ ++ M V P T+P L KA + +R+G Q+HG VVK G
Sbjct: 77 INGYVGGEFPQMAVSVYRRM-VRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLG 135
Query: 119 LEFDQFIHNTIIYMYANC-------------------------------GFLSEARLMFD 147
L D ++ N++I Y C G EA +F
Sbjct: 136 LLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFF 195
Query: 148 EVDTE----------------------------------FDVVAWNSMIIGLAKCGEIDE 173
+D E ++V N+M+ K G E
Sbjct: 196 RMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAMLDMYVKNGCFYE 255
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
++ +FD++ +R+ VSW MI+G V++ K++LELF M+ I P + S+L+ACA
Sbjct: 256 AKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACAS 315
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LG + G W+H ++ + + + TAI+DMY KCGC E AL++F ++ ++ WN++
Sbjct: 316 LGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNAL 375
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ GLAM+G +EA+ LF + S +KP+ I+F+A+LTAC H G V++ + YF M++ Y
Sbjct: 376 LCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYN 435
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
+ P ++HY CM+D RAGLLEEA +L R+MP PD +IWG LL+AC GNIE++ +
Sbjct: 436 LLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIELSHRIQ 495
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
I+ELD ++S +VL+SN+ A + ++ R LMK+ + K PG S+IEVDG+ HEF
Sbjct: 496 DYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDGKAHEF 555
Query: 474 VAGGRLHPKAPEVYLLLN 491
V G H + E+Y +LN
Sbjct: 556 VVGDISHLQTEEIYKVLN 573
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 288/499 (57%), Gaps = 39/499 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAF----CTSPAGDINYAYLVFTQIKKP-NLFIW 55
+ L++IHA I+ G++ + L F SP ++YA+ VF++I+KP N+FIW
Sbjct: 30 LTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPP-PMSYAHKVFSKIEKPINVFIW 88
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
NT+IRG+++ +A+ L+ +M + ++P TYP L KA ++ R G +H V+
Sbjct: 89 NTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVI 148
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
+ G ++ N+++++YANC G++ +
Sbjct: 149 RSGFGSLIYVQNSLLHLYANC--------------------------------GDVASAY 176
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
++FDKM ++ V+WNS+I+G+ N K +EAL L+ EM + IKP FT+VSLL+ACAK+G
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIG 236
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A+ G+ H +++ N ++D+Y +CG E A +F+ + K W S++
Sbjct: 237 ALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 296 GLAMNGYENEAIKLFSGLQSS-NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLA+NG EAI+LF ++S L P I+F+ +L AC+H G V + +YF M+E YKI
Sbjct: 297 GLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKI 356
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+P I+H+ CMVD L RAG +++A + I MP P+ +IW +LL AC HG+ ++A+ A
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARM 416
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+I++L+ N S YVL+SN+YA+ ++ + + R M + K PG SL+EV VHEF+
Sbjct: 417 KILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFL 476
Query: 475 AGGRLHPKAPEVYLLLNDL 493
G + HP+ +Y L ++
Sbjct: 477 MGDKSHPQNDMIYAKLKEM 495
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 186/529 (35%), Positives = 293/529 (55%), Gaps = 64/529 (12%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL----------------------------AFCTSPA-- 34
K++HAH++K GL + + ++ A T A
Sbjct: 148 KQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASK 207
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A +F +I ++ WN +I G++QS A+ F +M + + P T S+
Sbjct: 208 GFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMR-RAKVTPNVSTMLSV 266
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A AQ G QL G V+ +E + G S RL+
Sbjct: 267 LSACAQSG---SSLQL-GNWVRSWIE--------------DRGLGSNIRLV--------- 299
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
N +I KCG+++E+ LF+K+ +N VSWN MI GY +KEAL LFR M +
Sbjct: 300 ----NGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQ 355
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFEL-NTIVV-TAIIDMYCKCGCP 272
NI P++ T +S+L ACA LGA+ G+W+H ++ N + NT+ + T++IDMY KCG
Sbjct: 356 SNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDL 415
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
A ++F+ + K L+ WN+M+ G AM+G+ + A+ LFS + S PD I+F+ VLTAC
Sbjct: 416 AVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTAC 475
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H+G ++ + YF+ M + YK+ P + HY CM+D GRAGL +EAE L+++M PD I
Sbjct: 476 KHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAI 535
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
W SLL ACR H IE+A+ AK + EL+ YVL+SN+YA + ++E+ + R + +
Sbjct: 536 WCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLND 595
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+++K PGCS IEVD VHEF+ G ++HP++ E+Y +L+++ + +++ G
Sbjct: 596 NRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAG 644
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/539 (31%), Positives = 287/539 (53%), Gaps = 49/539 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ LK+IH+ +IKTGL A S+++ FC SP GD++YA +F I+ PN IWN +I
Sbjct: 41 LQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMI 100
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG S S +P A+ ++ M ++S +P T+PS+FK+ ++ A +G Q+H V+K GL
Sbjct: 101 RGLSSSESPFLALEYYVHM-ISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGL 159
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E + F+H ++I MYA G L ARL+FD+ D V++ ++I G A G +DE+R LFD
Sbjct: 160 EHNAFVHTSLINMYAQNGELVNARLVFDKSSMR-DAVSFTALITGYASKGFLDEARELFD 218
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
++ R+ VSWN+MISGY ++ + +EA+ F EM+ + P+ TM+S+L+ACA+ G+ Q
Sbjct: 219 EIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQ 278
Query: 240 -GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G W+ +++ N +V +IDMY KCG E A +F + K + WN M+ G
Sbjct: 279 LGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYT 338
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK-IKPS 357
EA+ LF + SN+ P+ ++F+++L AC + G ++ K + + K +K +
Sbjct: 339 HMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNT 398
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSD------------------------------ 387
+ ++ ++D + G L A+++ M +
Sbjct: 399 VALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTS 458
Query: 388 ----PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES--CGYVLMSNLYAASYQFE 441
PD I + +L+AC+ G + + ++ +I+ K Y M +L+ + F+
Sbjct: 459 EGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFD 518
Query: 442 EAMEERLLMKEVKIEKEPGCSL-----IEVDGEVHEFVAGG--RLHPKAPEVYLLLNDL 493
EA E + E+K + CSL I E+ E VA L P+ P Y+LL+++
Sbjct: 519 EA-ETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNI 576
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 164/380 (43%), Positives = 252/380 (66%), Gaps = 1/380 (0%)
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+ N ++ Y + ++EAR +FD + D+V+WN+MI G A GE+ +R +FD
Sbjct: 22 DVFLCNVMLAAYVSRSEVAEARKVFDGMPMR-DLVSWNTMIHGYAMRGEVGLAREIFDGT 80
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ SW+SMIS Y ++ + KEALEL+REM +I P T+VS+++AC+ LGA+ G
Sbjct: 81 EDRDAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGA 140
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H F+ +N EL+ + TA+IDMY KCG E A +VF+ +P+K + W+SM+ GLA +G
Sbjct: 141 EVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHG 200
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+E++ LFS + S +KP+ ++F+ VL AC H G V++ K YF M E + I+P+++HY
Sbjct: 201 LGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHY 260
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD LGR+G +EEA +LIRSM +PD IIW +LL ACR H N+E+A++A ++ LD
Sbjct: 261 GCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAKLRVLDP 320
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
YVL+SN+YA + +E E R ++ I++ PG S IE D ++HEFV+G RLHP
Sbjct: 321 LGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHP 380
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
++ E+Y +L ++ +++ G
Sbjct: 381 RSKEIYRVLEEMMDRLKQAG 400
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 137/309 (44%), Gaps = 66/309 (21%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G++ A +F + + F W+++I +++S + A+ L+ +M S I P +T S+
Sbjct: 68 GEVGLAREIFDGTEDRDAFSWSSMISAYAKSRRSKEALELWREMHAASII-PDCITLVSV 126
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A + LG GA++H V +E D + +I MYA CG + A+ +FD + E D
Sbjct: 127 VSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRM-PEKD 185
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V W+SMIIGLA G ES LF KM+S
Sbjct: 186 VQTWSSMIIGLANHGLGHESLSLFSKMIS------------------------------- 214
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+ +KP+ T V +L AC +G + +G+ F N E++ I T ++ Y GC
Sbjct: 215 EGMKPNGVTFVGVLIACTHVGLVSEGK--KYFRSMN--EVHGIEPT--VEHY---GC--- 262
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
MV L +G+ EA +L ++S +PD I + A+L AC
Sbjct: 263 ------------------MVDLLGRSGHVEEARQL---IRSMTFEPDTIIWRALLGACRI 301
Query: 335 SGKVNQAKD 343
V A++
Sbjct: 302 HKNVEIAEE 310
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
MY K G + A F+ P + + N M+ EA K+F G+ +L +S
Sbjct: 1 MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDL----VS 56
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
+ ++ G+V A++ F + +S M+ A ++ +EA +L R M
Sbjct: 57 WNTMIHGYAMRGEVGLAREIFDGTEDRDAFS-----WSSMISAYAKSRRSKEALELWREM 111
Query: 385 PSD---PDAIIWGSLLSACRKHGNIEMAKQAAKQI----IELDKNESCGYVLMSNLYAAS 437
+ PD I S++SAC G + + + + + IELD G L+ ++YA
Sbjct: 112 HAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLK--LGTALI-DMYAKC 168
Query: 438 YQFEEAME--ERLLMKEVK 454
E A +R+ K+V+
Sbjct: 169 GDIESAQRVFDRMPEKDVQ 187
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 181/501 (36%), Positives = 280/501 (55%), Gaps = 18/501 (3%)
Query: 5 KKIHAHLIKTGL----AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
IH L+K GL A P A A SP ++A +F ++ + L + R
Sbjct: 29 SSIHCLLLKAGLLHVGAHLPTALLSAYAALGSP----DHARRLFDEMPEQGLVPRTAMAR 84
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG--LAR--DGAQLHGRVVK 116
S AI +F DM V + P + A G AR G +H VV
Sbjct: 85 AHVASGQAAQAIAVFGDM-VADGVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVT 143
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G+ D F+ +I +Y G L +R +FD++ + + WN+M+ A+ G++D +
Sbjct: 144 SGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSR-STITWNAMLHQYARHGKVDTAYE 202
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN---IKPSEFTMVSLLNACAK 233
+F M R+ VSWN++++GY + +EAL LFR+M + + P+ TM ++L ACA
Sbjct: 203 MFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAG 262
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNS 292
G + G W+H ++ N + + +IDMYCKCG + ALQVF P KK L W +
Sbjct: 263 AGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTT 322
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
++ GLAM+G +A+++F +Q + + PD ++ + VL AC H G V++ YF M +
Sbjct: 323 VICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKF 382
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+I P I+HY CM+D LGR G L+EA +IR+MP DP+ +IWG+ LSAC+ HGN+E+ K A
Sbjct: 383 RITPKIEHYGCMIDLLGRVGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIA 442
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A+++ LD ++ G V++S++YA + + ER M ++++K PGCS IE+ GEVHE
Sbjct: 443 AEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEVHE 502
Query: 473 FVAGGRLHPKAPEVYLLLNDL 493
FVAGG HP+ E+ +L D+
Sbjct: 503 FVAGGSQHPQYAEICSVLQDV 523
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 280/467 (59%), Gaps = 1/467 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A L+ Q ++ W ++I +S++ + A+ F +ML + I P +T +
Sbjct: 188 GMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNML-SEGIAPDDVTVIGV 246
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A +QL G LH V ++G+ + + +I MYA CG AR +FD V
Sbjct: 247 LSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRR 306
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+WN++I G K G +D +R LFD+M R+ +++NSMI+GY+ + + +EAL LF M+
Sbjct: 307 PQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRR 366
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+++ FT+VSLL+ACA LGA+ QG +H + E + + TA++DMY KCG
Sbjct: 367 HDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNE 426
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VF + K+ + W +M+ GLA NG ++ F ++ +P+ +S+IAVLTAC+H
Sbjct: 427 ATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSH 486
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
S +N+ + YF M Y I P I+HY CM+D LGR+GLL+EA L+++MP P+++IW
Sbjct: 487 SCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWA 546
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
S+LSACR H I++A+ AA+ +++++ +E YV + N+ S ++E+A + R+LM+E +
Sbjct: 547 SILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQ 606
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++K G S + V G+VH+FV + HP+ E+ +L ++ ++ G
Sbjct: 607 VKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSAG 653
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 184/355 (51%), Gaps = 23/355 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKP-NLFIWN 56
++ ++HAHL +G P +A +L C P+ ++ Y + + P + F+++
Sbjct: 12 VRQAAELHAHLTTSGRLLHPPSAHHLLNSLVNCLPPSDPLHLRYALHLFDRMPASTFLFD 71
Query: 57 TIIRGFSQSST----PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA---- 108
T +R ++ T P +LF M + ++P T+ LFK + +R A
Sbjct: 72 TALRACFRAGTSSGDPDIPFVLFRRMR-RAAVRPDGFTFHFLFKCSSS---SRPRALLCT 127
Query: 109 QLHGRVVKQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
LH ++ L F+ N++I+MY G + R FDE+ + D V+W +I GLAK
Sbjct: 128 MLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVK-DAVSWTMVISGLAK 186
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
G + ++R L + R+ +SW S+I+ Y R + KEA++ F+ M + I P + T++ +
Sbjct: 187 MGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGV 246
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK-KG 286
L+AC++L + G +H+ + ++ +V A+IDMY KCG A +VF+ V + +
Sbjct: 247 LSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRR 306
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
WN+++ G +G+ + A LF ++ D I+F +++T HSG++ +A
Sbjct: 307 PQSWNAIIDGYCKHGHVDVARSLFDQMEVR----DIITFNSMITGYIHSGQLREA 357
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 204/465 (43%), Gaps = 37/465 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H ++K G I S L S GD I ++ WN+I+ ++
Sbjct: 915 RQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYAD 974
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ ML + P ++ SL + G + G Q+HG V K G
Sbjct: 975 RGHMKEAVYYLKQMLWHGKM-PSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSV 1033
Query: 125 -IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ T+I MY C + +F+E+ + I L C
Sbjct: 1034 HVQTTLIDMYGKCCCFDHSLAIFNEIPS-----------IALECC--------------- 1067
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA--IRQGE 241
NS+I+ +R F ALE+ M + + P + T + + A + + + +
Sbjct: 1068 ------NSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQ 1121
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H+ LV FE++ V +++I Y G + +F + + C+ +++ A G
Sbjct: 1122 MLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYG 1181
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
A++LF + SS LKPD ++F+ + C+ +G + + LM + ++ P +H+
Sbjct: 1182 DGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHF 1241
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+CMV+ L R G ++EA +++ P W SLL +C+ HG + K+AA +I++ +
Sbjct: 1242 ACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGR 1301
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
+ + +SN + E A+ + M VK K+ G SLIEV
Sbjct: 1302 KDPATTLQVSNFFNDIGDRETALRIK-EMTNVKEVKKSGHSLIEV 1345
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 187/426 (43%), Gaps = 59/426 (13%)
Query: 6 KIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
++H ++ GL +P S ++ SP ++ +F ++ N + N ++RG
Sbjct: 814 QLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLS----LFRELPLQNTAMCNVVLRGL 869
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA------QLHGRVVK 116
I F+DM + Q L L YA G ++G QLHG V+K
Sbjct: 870 GNLKLTEELICCFLDM------RRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLK 923
Query: 117 QG-LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
G + + F+ N+++ +Y+ G D VDT V A N ++
Sbjct: 924 AGWIPSNIFLSNSLVDLYSAIG---------DSVDT---VKALNDIL------------- 958
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
S + +SWNS++S Y KEA+ ++M PS + VSLL K G
Sbjct: 959 -------SEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTG 1011
Query: 236 AIRQGEWIHNFLVTNCFELNTI-VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
+ G IH + F +++ V T +IDMY KC C + +L +FN +P L C NS++
Sbjct: 1012 DWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLI 1071
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD---YFTLMTET 351
+ A+++ + + PD ++F A + A + S + + L+
Sbjct: 1072 TSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLG 1131
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+++ ++ S ++ A AG L + + + DP+ I + +++SAC ++G+ A +
Sbjct: 1132 FEMDMAV--CSSLITAYACAGQLSSSHLIFEGL-LDPNVICFTAIISACARYGDGARAME 1188
Query: 412 AAKQII 417
Q++
Sbjct: 1189 LFDQMV 1194
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 108/238 (45%), Gaps = 6/238 (2%)
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ S N MI+G++R+ A ++R M I+ + T ++L C+ A++
Sbjct: 757 MAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQ-- 814
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H ++ N V +A+++ Y P +L +F +P + + N ++ GL
Sbjct: 815 --LHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGNL 872
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK-VNQAKDYFTLMTETYKIKPSIK 359
E I F ++ L+ + +S+ + C +G+ + Q + ++ + I +I
Sbjct: 873 KLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIF 932
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
+ +VD G + K + + S+ D I W S+LS G+++ A KQ++
Sbjct: 933 LSNSLVDLYSAIGDSVDTVKALNDILSE-DVISWNSILSMYADRGHMKEAVYYLKQML 989
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 62/334 (18%), Positives = 129/334 (38%), Gaps = 41/334 (12%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N +I GF + A ++ +V S I+ P F + + QLHGRV+
Sbjct: 766 NRMITGFIRDGLADRARAVY-RWMVASGIRET----PHTFSTILGVCSTYEALQLHGRVL 820
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
GL + F+ + ++ Y + V++ S
Sbjct: 821 ALGLCCNPFVGSALVNHYMH-------------VESPH-------------------ASL 848
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALE-LFREMQEQNIKPSEFTMVSLLNACAKL 234
LF ++ +NT N ++ G + N+K E L F +M+ Q ++ + + + C +
Sbjct: 849 SLFRELPLQNTAMCNVVLRG-LGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQN 907
Query: 235 GA-IRQGEWIHNFLV-TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
G + QG +H ++ N + +++D+Y G ++ N + + + WNS
Sbjct: 908 GEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNS 967
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
++ A G+ EA+ + P SF+++L +G ++ +
Sbjct: 968 ILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLG 1027
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
S+ + ++D G+ + + + +PS
Sbjct: 1028 FSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPS 1061
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 292/538 (54%), Gaps = 40/538 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K L+ +H+ +I L + +++ S D+ A VF +I + N+ I N +IR
Sbjct: 56 LKTLRTVHSRIISEDLRYNSSLGVKLMRAYAS-LKDVATARKVFDEIPERNVIIINVMIR 114
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ + R I +F M + ++P T+P + KA + G G ++HG K GL
Sbjct: 115 SYVNNGFYREGIQVFGTM-CSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLS 173
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES------ 174
F+ N ++ MY CGFLSEARL+ DE+ + DVV+WNS++ G A+ D++
Sbjct: 174 STLFVGNGLVSMYGKCGFLSEARLVLDEM-SRRDVVSWNSLVAGYAQNQRFDDALEVCRE 232
Query: 175 -------------------------------RRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+ +F KM ++ VSWN MI Y++N
Sbjct: 233 MESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 292
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
EA+EL+ M+ +P ++ S+L AC A+ G+ IH ++ N ++ A+I
Sbjct: 293 EAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 352
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY KCGC +RA VF + + + W +M+ +G +A+ LFS +Q S L PD I
Sbjct: 353 DMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSI 412
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F+ L AC+H+G + + + F LMT+ YKI P ++H +CMVD LGRAG ++EA K I+
Sbjct: 413 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQE 472
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
MP +P+ +WG+LL ACR H N ++ AA ++ +L +S YVL+SN+YA + ++EE
Sbjct: 473 MPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 532
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R +MK ++K PG S +EV+ +H F+ G R HP++ E+Y L+ L ++E+G
Sbjct: 533 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELG 590
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 284/525 (54%), Gaps = 65/525 (12%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A+ VF QI +PN IWN + RG+SQ+ + ++ I+LF M + P T+P + K+
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLD-VMPNCFTFPVILKSCV 62
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYM--------------------------- 132
++ ++G ++H V+K G + F+ T+I M
Sbjct: 63 KINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122
Query: 133 ----YANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS----- 183
Y C L AR +FD + E D+V WN+MI G + ++ +R LFDKM +
Sbjct: 123 MINGYITCCDLVTARRLFD-LAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMS 181
Query: 184 --------------------------RNTVSWNSMISGYVRNVKFKEALELFREM-QEQN 216
RN SWN++I GY RN F E L F+ M +
Sbjct: 182 WNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGT 241
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+ P++ T+V++L+ACA+LGA+ G+W+H + ++ ++ N V A++DMY KCG E AL
Sbjct: 242 VVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETAL 301
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
VF ++ K L WN+++ GLA++G+ +A+ LFS ++ + PD I+FI +L AC H G
Sbjct: 302 DVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMG 361
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
V YF MT+ Y I P I+HY C+VD LGRAGLL A IR MP + DA+IW +L
Sbjct: 362 LVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAAL 421
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
L ACR + N+E+A+ A +++IE + YV++SN+Y ++++ ++ M++ +
Sbjct: 422 LGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDTGFK 481
Query: 457 KEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
K PGCSLIEV+ + EF + HP+ ++Y L L L++ G
Sbjct: 482 KLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLRSSG 526
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 123/249 (49%), Gaps = 14/249 (5%)
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
++ + ++FD++ N WN+M GY +N K+ + LFR+M+ ++ P+ FT +L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
C K+ A+++GE +H F++ + F N V T +IDMY G A +VF + ++ + W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKP--DYISFIAVLTACNHSGKVNQAKDYFTLM 348
+M+ NGY L + + +L P D + + +++ + V +A++ F M
Sbjct: 121 TAMI-----NGYIT-CCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKM 174
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
+ ++ +++ G + E+L MP + + W +L+ ++G
Sbjct: 175 P-----NKDVMSWNTVLNGYASNGDVMACERLFEEMP-ERNVFSWNALIGGYTRNGCFSE 228
Query: 409 AKQAAKQII 417
A K+++
Sbjct: 229 VLSAFKRML 237
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 32/206 (15%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+ +F ++ + N+F WN +I G++++ + F MLV + P T ++
Sbjct: 193 GDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNV 252
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A A+LG G +H G + + ++ N ++ MYA CG + A +F +D + D
Sbjct: 253 LSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNK-D 311
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+++WN++I GLA G +AL LF M+
Sbjct: 312 LISWNTIIGGLAVHGH-------------------------------GADALNLFSHMKI 340
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQG 240
P T + +L AC +G + G
Sbjct: 341 AGENPDGITFIGILCACTHMGLVEDG 366
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 2/129 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A VF + +L WNTII G + +A+ LF M + P +T+ +
Sbjct: 295 GVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGE-NPDGITFIGI 353
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH-NTIIYMYANCGFLSEARLMFDEVDTEF 153
A +GL DG + + H I+ + G L+ A ++ E
Sbjct: 354 LCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEA 413
Query: 154 DVVAWNSMI 162
D V W +++
Sbjct: 414 DAVIWAALL 422
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 279/470 (59%), Gaps = 36/470 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+KDL ++HA +I+ G ++ +++ FC S GD+NYA +VF +I+ + F+WNT+I
Sbjct: 68 LKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADGFLWNTMI 127
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGF ++ A + ML I T+ L K QLG G QLH ++K GL
Sbjct: 128 RGFGRNRKLLMAFEFYKRML-EKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVNILKLGL 186
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ ++ NT+I+MY + +++ +R LFD
Sbjct: 187 DSHVYVRNTLIHMYG--------------------------------RLKDVNIARNLFD 214
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
++ + V+WN++I +V + EAL+LF +M + ++P E T+V ++AC+ LGA+
Sbjct: 215 ELPKTDLVAWNAVIDCHVSCGMYNEALDLFVQMLQSGVEPDEATLVVTISACSALGALDC 274
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G W+H+ + +N V ++IDMY KCG E A ++FN V K + WN+M+ GLA
Sbjct: 275 GRWVHSHVNSNDRGKTIAVFNSLIDMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLAT 334
Query: 300 NGYENEAIKLFSGLQSSNLK-PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +A+ LFS + + ++ PD ++F+AVL ACN+ GKV + + YF LMT+ + I+P++
Sbjct: 335 HGDAEDALTLFSNMLAERVETPDGVTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTL 394
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
KHY MVD LGRAG +EEA +LI+SMP + +A+IW +LL+AC+ HGN+E+ ++ + ++E
Sbjct: 395 KHYGSMVDILGRAGFVEEAYQLIKSMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLE 454
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK-EPGCSLIEVD 467
+ + S YVL++N+YA+S Q+ E ++ R M +EK EPG S +E++
Sbjct: 455 IVADHSSDYVLLANMYASSGQWNEMIKTRKSMHRKGVEKPEPGNSYLEIN 504
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 302/537 (56%), Gaps = 46/537 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +HA L+ G + ++R++ + GD++ + F QI + +++ WN++I +
Sbjct: 36 KCLHALLVVAGKVQSIFISTRLVNLYAN-LGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ AI F +L+ S I+P T+P + KA G DG ++H K G +++ F
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA---CGTLVDGRKIHCWAFKLGFQWNVF 151
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL------------------- 165
+ ++I+MY+ GF AR +FD++ D+ +WN+MI GL
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMISGLIQNGNAAQALDVLDEMRLE 210
Query: 166 --------------------AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEA 205
AK G +D + ++F+ + ++ +SWN++I+GY +N EA
Sbjct: 211 GIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEA 270
Query: 206 LELFREMQE-QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
+E+++ M+E + I P++ T VS+L A A +GA++QG IH ++ L+ V T +ID
Sbjct: 271 IEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLID 330
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
+Y KCG A+ +F VP++ WN+++ ++G+ + +KLF + +KPD+++
Sbjct: 331 VYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVT 390
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
F+++L+AC+HSG V + K F LM E Y IKPS+KHY CMVD LGRAG LE A I+ M
Sbjct: 391 FVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDM 449
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
P PDA IWG+LL ACR HGNIE+ K A+ ++ E+D YVL+SN+YA ++E
Sbjct: 450 PLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVD 509
Query: 445 EERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ R L +E ++K PG S IEV+ +V F G + HPK E+Y L L ++ +G
Sbjct: 510 KVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLG 566
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 177/500 (35%), Positives = 283/500 (56%), Gaps = 37/500 (7%)
Query: 5 KKIHAHLIKTGLAKDPI--AASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
K++HAHL TG + PI A S++L G++++A L F+QI+ P+ WN IIRGF
Sbjct: 21 KQLHAHLFTTGQFRLPISPARSKLLELYALSLGNLSFAILTFSQIRTPSTNDWNAIIRGF 80
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
QS P NA + M+ S + LT + KA A++ + Q+H +V++G D
Sbjct: 81 IQSPNPTNAFAWYKSMISKSR-KVDALTCSFVLKACARVLARLESIQIHTHIVRKGFIAD 139
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ T++ +YA K GEID + ++FD+MV
Sbjct: 140 ALLGTTLLDVYA--------------------------------KVGEIDSAEKVFDEMV 167
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ SWN++ISG+ + K EAL LF+ M+ KP+E +++ L+ACA+LG ++GE
Sbjct: 168 KRDIASWNALISGFAQGSKPTEALSLFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEK 227
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
IH ++ F++N V +IDMY KCG ++A VF ++ +K + WN+M+ AM+G
Sbjct: 228 IHGYIKVERFDMNAQVCNVVIDMYAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHG 287
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+A++LF + S + PD +S++AVL ACNH G V + F M E +KP++KHY
Sbjct: 288 EGCKALELFEKMDQSGVSPDDVSYLAVLCACNHGGLVEEGFRLFNSM-ENCGVKPNVKHY 346
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+VD LGRAG L EA ++ SMP+ PD ++W +LL A R H N+E+A+ +++++E+
Sbjct: 347 GSVVDLLGRAGRLHEAYDIVNSMPTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGS 406
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
N +VL+SN+YAA ++ + R MK ++K PG S IE +G +H+F + H
Sbjct: 407 NHCGDFVLLSNVYAARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHE 466
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
E+Y L+++ ++E G
Sbjct: 467 SWREIYAKLDEIRFRVKEYG 486
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 181/501 (36%), Positives = 280/501 (55%), Gaps = 18/501 (3%)
Query: 5 KKIHAHLIKTGL----AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
IH L+K GL A P A A SP ++A +F ++ + L + R
Sbjct: 29 SSIHCLLLKAGLLHVGAHLPTALLSAYAALGSP----DHARRLFDEMPEQGLVPRTAMAR 84
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG--LAR--DGAQLHGRVVK 116
S AI +F DM V + P + A G AR G +H VV
Sbjct: 85 AHVASGQAAQAIAVFGDM-VADGVFPDNVAVAVALGACHGAGSWTARRNPGKMIHALVVT 143
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G+ D F+ +I +Y G L +R +FD++ + + WN+M+ A+ G++D +
Sbjct: 144 SGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSR-STITWNAMLHQYARHGKVDTAYE 202
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN---IKPSEFTMVSLLNACAK 233
+F M R+ VSWN++++GY + +EAL LFR+M + + P+ TM ++L ACA
Sbjct: 203 MFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTMSTILGACAG 262
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNS 292
G + G W+H ++ N + + +IDMYCKCG + ALQVF P KK L W +
Sbjct: 263 AGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTT 322
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
++ GLAM+G +A+++F +Q + + PD ++ + VL AC H G V++ YF M +
Sbjct: 323 VICGLAMHGRTTDALRMFDMMQDNGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKF 382
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+I P I+HY CM+D LGR G L+EA +IR+MP DP+ +IWG+ LSAC+ HGN+E+ K A
Sbjct: 383 RITPKIEHYGCMIDLLGRIGRLQEAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIA 442
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A+++ LD ++ G V++S++YA + + ER M ++++K PGCS IE+ GEVHE
Sbjct: 443 AEELTRLDPDDPWGRVMLSSMYAKAQDWIGLARERREMNSMQVKKTPGCSSIELKGEVHE 502
Query: 473 FVAGGRLHPKAPEVYLLLNDL 493
FVAGG HP+ E+ +L D+
Sbjct: 503 FVAGGSQHPQYAEICSVLQDV 523
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 179/505 (35%), Positives = 293/505 (58%), Gaps = 14/505 (2%)
Query: 1 MKDLKKIHAHLIKTGL-----AKDPIAASRIL-AFCTSPAGD-----INYAYLVFTQIKK 49
+ L ++HA GL P ++IL A T P ++YA F I+
Sbjct: 40 INQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFSLLHYAVSTFDNIQN 99
Query: 50 PNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQ 109
P+ F +N IIR + S+ +A+ F+ M S + P +YP KA A L +
Sbjct: 100 PSTFCYNVIIRLHTLHSSALSALHFFLQMRRFS-VPPDFHSYPFALKACAHLRVLSLAQC 158
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
LH +V K G D ++ N++I++Y+ L+ A +FDE ++ DVV++N+++ G K G
Sbjct: 159 LHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDE-SSDRDVVSYNALVDGFVKAG 217
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
E ++R +FD M R++VSW S+I+GY + EA+ LF M ++P +VS L+
Sbjct: 218 EFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKLEPDNIALVSALS 277
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
ACA+LG + +G+ IH+++ N + ++ + T ++D Y K GC + A++VF P K L
Sbjct: 278 ACAQLGELEKGKQIHDYIKKNRIQADSFLSTGLVDFYAKSGCIDTAIKVFELSPDKSLIT 337
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WN+M+ G+AM+G + + FS + + +KPD ISF+ VL C+H G V++AK F M
Sbjct: 338 WNAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVGCSHGGLVDEAKKLFDEME 397
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
Y ++ +KHY CM D L RAGL++EA +L + +P D +W LL CR HGNIE+A
Sbjct: 398 SIYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGDIFVWSGLLGGCRIHGNIEIA 457
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK-IEKEPGCSLIEVDG 468
+QAAKQ++EL + Y +++N+YA + ++E+ ++ R M + ++K G S I++ G
Sbjct: 458 EQAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRSMSSNRAVKKNAGRSSIQLGG 517
Query: 469 EVHEFVAGGRLHPKAPEVYLLLNDL 493
HEF+AG LH ++ E+Y++L+ +
Sbjct: 518 LTHEFLAGESLHAQSSEIYMVLDGI 542
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 280/467 (59%), Gaps = 1/467 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A L+ Q ++ W ++I +S++ + A+ F +ML + I P +T +
Sbjct: 126 GMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNML-SEGIAPDDVTVIGV 184
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A +QL G LH V ++G+ + + +I MYA CG AR +FD V
Sbjct: 185 LSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRR 244
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+WN++I G K G +D +R LFD+M R+ +++NSMI+GY+ + + +EAL LF M+
Sbjct: 245 PQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRR 304
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+++ FT+VSLL+ACA LGA+ QG +H + E + + TA++DMY KCG
Sbjct: 305 HDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNE 364
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VF + K+ + W +M+ GLA NG ++ F ++ +P+ +S+IAVLTAC+H
Sbjct: 365 ATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSH 424
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
S +N+ + YF M Y I P I+HY CM+D LGR+GLL+EA L+++MP P+++IW
Sbjct: 425 SCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWA 484
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
S+LSACR H I++A+ AA+ +++++ +E YV + N+ S ++E+A + R+LM+E +
Sbjct: 485 SILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQ 544
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++K G S + V G+VH+FV + HP+ E+ +L ++ ++ G
Sbjct: 545 VKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSAG 591
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 203/465 (43%), Gaps = 37/465 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H ++K G I S L S GD I ++ WN+I+ ++
Sbjct: 853 RQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMYAD 912
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ ML + P ++ SL + G + G Q+HG V K G
Sbjct: 913 RGHMKEAVYYLKQMLWHGKM-PSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSV 971
Query: 125 -IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ T+I MY C + +F+E+ + I L C
Sbjct: 972 HVQTTLIDMYGKCCCFDHSLAIFNEIPS-----------IALECC--------------- 1005
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA--IRQGE 241
NS+I+ + F ALE+ M + + P + T + + A + + + +
Sbjct: 1006 ------NSLITSSLGCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQ 1059
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H+ LV FE++ V +++I Y G + +F + + C+ +++ A G
Sbjct: 1060 MLHSCLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYG 1119
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
A++LF + SS LKPD ++F+ + C+ +G + + LM + ++ P +H+
Sbjct: 1120 DGARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHF 1179
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+CMV+ L R G ++EA +++ P W SLL +C+ HG + K+AA +I++ +
Sbjct: 1180 ACMVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGR 1239
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
+ + +SN + E A+ + M VK K+ G SLIEV
Sbjct: 1240 KDPATTLQVSNFFNDIGDRETALRIK-EMTNVKEVKKSGHSLIEV 1283
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 158/299 (52%), Gaps = 19/299 (6%)
Query: 53 FIWNTIIRGFSQSST----PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA 108
F+++T +R ++ T P +LF M + ++P T+ LFK + +R A
Sbjct: 6 FLFDTALRACFRAGTSSGDPDIPFVLFRRMR-RAAVRPDGFTFHFLFKCSSS---SRPRA 61
Query: 109 ----QLHGRVVKQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMII 163
LH ++ L F+ N++I+MY G + R FDE+ + D V+W +I
Sbjct: 62 LLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVK-DAVSWTMVIS 120
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFT 223
GLAK G + ++R L + R+ +SW S+I+ Y R + KEA++ F+ M + I P + T
Sbjct: 121 GLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVT 180
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
++ +L+AC++L + G +H + ++ +V A+IDMY KCG A +VF+ V
Sbjct: 181 VIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVG 240
Query: 284 K-KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+ + WN+++ G +G+ + A LF ++ D I+F +++T HSG++ +A
Sbjct: 241 RGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVR----DIITFNSMITGYIHSGQLREA 295
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 187/426 (43%), Gaps = 59/426 (13%)
Query: 6 KIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
++H ++ GL +P S ++ SP + A +F ++ N + N ++RG
Sbjct: 752 QLHGRVLALGLCCNPFVGSALVNHYMHVESP----HAALSLFRELPLQNTAMCNVVLRGL 807
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA------QLHGRVVK 116
I F+DM + Q L L YA G ++G QLHG V+K
Sbjct: 808 GNLKLTEELICCFLDM------RRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLK 861
Query: 117 QG-LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
G + + F+ N+++ +Y+ G D VDT V A N ++
Sbjct: 862 AGWIPSNIFLSNSLVDLYSAIG---------DSVDT---VKALNDIL------------- 896
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
S + +SWNS++S Y KEA+ ++M PS + VSLL K G
Sbjct: 897 -------SEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTG 949
Query: 236 AIRQGEWIHNFLVTNCFELNTI-VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
+ G IH + F +++ V T +IDMY KC C + +L +FN +P L C NS++
Sbjct: 950 DWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLI 1009
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD---YFTLMTET 351
+ A+++ + + PD ++F A + A + S + + L+
Sbjct: 1010 TSSLGCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLG 1069
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+++ ++ S ++ A AG L + + + DP+ I + +++SAC ++G+ A +
Sbjct: 1070 FEMDMAV--CSSLITAYACAGQLSSSHLIFEGL-LDPNVICFTAIISACARYGDGARAME 1126
Query: 412 AAKQII 417
Q++
Sbjct: 1127 LFDQMV 1132
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 108/238 (45%), Gaps = 6/238 (2%)
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ S N MI+G++R+ A ++R M I+ + T ++L C+ A++
Sbjct: 695 MAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEALQ-- 752
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H ++ N V +A+++ Y P AL +F +P + + N ++ GL
Sbjct: 753 --LHGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGNL 810
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK-VNQAKDYFTLMTETYKIKPSIK 359
E I F ++ L+ + +S+ + C +G+ + Q + ++ + I +I
Sbjct: 811 KLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIF 870
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
+ +VD G + K + + S+ D I W S+LS G+++ A KQ++
Sbjct: 871 LSNSLVDLYSAIGDSVDTVKALNDILSE-DVISWNSILSMYADRGHMKEAVYYLKQML 927
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/334 (17%), Positives = 132/334 (39%), Gaps = 41/334 (12%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N +I GF + A ++ +V S I+ T+ ++ + + QLHGRV+
Sbjct: 704 NRMITGFIRDGLADRARAVY-RWMVASGIRETPHTFSTILGVCSTY----EALQLHGRVL 758
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
GL + F+ + ++ Y + V++ ++
Sbjct: 759 ALGLCCNPFVGSALVNHYMH-------------VESPHAALS------------------ 787
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALE-LFREMQEQNIKPSEFTMVSLLNACAKL 234
LF ++ +NT N ++ G + N+K E L F +M+ Q ++ + + + C +
Sbjct: 788 -LFRELPLQNTAMCNVVLRG-LGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQN 845
Query: 235 GA-IRQGEWIHNFLV-TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
G + QG +H ++ N + +++D+Y G ++ N + + + WNS
Sbjct: 846 GEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNS 905
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
++ A G+ EA+ + P SF+++L +G ++ +
Sbjct: 906 ILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLG 965
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
S+ + ++D G+ + + + +PS
Sbjct: 966 FSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPS 999
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 291/502 (57%), Gaps = 19/502 (3%)
Query: 2 KDLK---KIHAHLIKTGLAKD---PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIW 55
KDL+ ++H + ++ A D A + A C P A VF + + N+ W
Sbjct: 165 KDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVD----ARRVFDAMPERNVVSW 220
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N++I + Q+ A++LF++M+ T P +T S+ A A L R+G Q+H +V
Sbjct: 221 NSLITCYEQNGPVGEALVLFVEMMATG-FFPDEVTLSSVMSACAGLAAEREGRQVHAHMV 279
Query: 116 KQG-LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
K+ L D ++N ++ MYA CG EAR +FD + + VV+ S++ G AK ++++
Sbjct: 280 KRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSR-SVVSETSILAGYAKSANVEDA 338
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
+ +F +MV +N ++WN +I+ Y +N + +EA+ LF +++ +I P+ +T ++LNAC +
Sbjct: 339 QVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNI 398
Query: 235 GAIRQGEWIHNFLVTNCF------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
++ G+ H ++ F E + V +++DMY K G + +VF + +
Sbjct: 399 AVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNV 458
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN+M+ G A NG +A+ LF + SN PD ++ I VL+AC HSG V++ + +F M
Sbjct: 459 SWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFM 518
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
TE + I PS HY+CMVD LGRAG L+EAE+LI+ MP++PD+++W SLL ACR H N+E+
Sbjct: 519 TEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVEL 578
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
++ A ++ ELD S YVL+SN+YA ++ + R MK+ + K+PGCS IE+
Sbjct: 579 GERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGS 638
Query: 469 EVHEFVAGGRLHPKAPEVYLLL 490
+++ F+A HP E++ L
Sbjct: 639 KMNVFLARDNRHPCRNEIHSTL 660
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 188/384 (48%), Gaps = 17/384 (4%)
Query: 74 LFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMY 133
L + +SP+ + PSL A A HG V+K + + F+ NT++ Y
Sbjct: 13 LVAHLRASSPLADLLRSAPSLPGARAA----------HGCVLKSPVAGETFLLNTLVSTY 62
Query: 134 ANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMI 193
A G L EAR +FD + + ++N+++ A+ G DE+R LF+ + + S+N+++
Sbjct: 63 ARLGRLREARRVFDGIPLR-NTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVV 121
Query: 194 SGYVRNVKFK--EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
+ R+ + +AL M + + ++ S L+ACA +R GE +H + +
Sbjct: 122 AALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSP 181
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
+ + TA++DMY KC P A +VF+ +P++ + WNS++ NG EA+ LF
Sbjct: 182 HADDVHIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFV 241
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA 371
+ ++ PD ++ +V++AC + + M + +++ + + +VD +
Sbjct: 242 EMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKC 301
Query: 372 GLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMS 431
G EA + SMPS + S+L+ K N+E A+ Q++E KN VL++
Sbjct: 302 GRTWEARCIFDSMPSR-SVVSETSILAGYAKSANVEDAQVVFSQMVE--KNVIAWNVLIA 358
Query: 432 NLYAASYQFEEAMEERLLMKEVKI 455
YA + + EEA+ + +K I
Sbjct: 359 -AYAQNGEEEEAIRLFVQLKRDSI 381
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 71/413 (17%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNA-ILLFIDMLVTSPIQPQRLTYPS 93
G + A +F I P+ +N ++ ++ L F+ + ++ S
Sbjct: 97 GRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFAS 156
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
A A R G Q+HG V + D I ++ MYA C +AR +FD + E
Sbjct: 157 ALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAM-PER 215
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+VV+WNS +I+ Y +N EAL LF EM
Sbjct: 216 NVVSWNS-------------------------------LITCYEQNGPVGEALVLFVEMM 244
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT-NCFELNTIVVTAIIDMYCKCGCP 272
P E T+ S+++ACA L A R+G +H +V + + ++ A++DMY KCG
Sbjct: 245 ATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRT 304
Query: 273 ERALQVFNTVP-------------------------------KKGLSCWNSMVFGLAMNG 301
A +F+++P +K + WN ++ A NG
Sbjct: 305 WEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNG 364
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIK--PSI 358
E EAI+LF L+ ++ P + ++ VL AC + + + + ++ E ++ P
Sbjct: 365 EEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPES 424
Query: 359 KHY--SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ + +VD + G +++ K+ M + D + W +++ ++G + A
Sbjct: 425 DVFVGNSLVDMYLKTGSIDDGAKVFERMAAR-DNVSWNAMIVGYAQNGRAKDA 476
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 333 bits (855), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 299/561 (53%), Gaps = 77/561 (13%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
LK+ + LI +GLA S IL S D+ Y L+F ++ P +F+WNTIIRGFS
Sbjct: 24 LKQTTSILITSGLAHHTFFLSDIL---RSATKDLGYTLLLFDRLATPYIFLWNTIIRGFS 80
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
SS P+ +L+ L + P R T+P L KA+++L + Q + +VK GL+FD
Sbjct: 81 ASSQPQ-MVLVAYSRLRNHGVIPDRHTFPLLLKAFSKL-RNENPFQFYAHIVKFGLDFDA 138
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM-- 181
F+ N+++ +A+CG++ +R +F E + DVV+W ++I G + G E+ F +M
Sbjct: 139 FVQNSLVSAFAHCGYVDCSRRLFIETAKK-DVVSWTALINGCLRNGRAVEALECFVEMRS 197
Query: 182 ---------------------------------VSRNTVSWN-----SMISGYVRNVKFK 203
V V W+ +++ Y +
Sbjct: 198 SGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCD 257
Query: 204 EALELFREMQEQN-------------------------------IKPSEFTMVSLLNACA 232
+A+++F EM +N I+P++ T+ S L ACA
Sbjct: 258 DAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACA 317
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
+LG++ QG W+H ++ + LN+ + TA++DMY KCGC + AL VF +P K + W +
Sbjct: 318 QLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTA 377
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
M+ GLAM G ++ LFS + S ++P+ ++F+ VL+AC H G V++ + F LM Y
Sbjct: 378 MINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDY 437
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+++P++ HY CMVD LGRAG LEEA K I SMP +P +WG+L S C H E+ +
Sbjct: 438 RLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHI 497
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
+I+L + S Y+L++NLY+ ++E A R LMK ++K PGCS IEV+G +HE
Sbjct: 498 GNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWIEVNGVIHE 557
Query: 473 FVAGGRLHPKAPEVYLLLNDL 493
F+A + H ++ VY++L +
Sbjct: 558 FIAFDKSHTESINVYMMLESV 578
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 173/473 (36%), Positives = 273/473 (57%), Gaps = 43/473 (9%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G I A +F +I ++ WN +I G+ ++ + A+ LF +M+ T+ ++P T ++
Sbjct: 143 GYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTN-VRPDESTMVTV 201
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A A+ G G Q+H + G + I N +I Y+
Sbjct: 202 ISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYS-------------------- 241
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
KCGE++ + LF + ++ +SWN +I GY +KEAL LF+EM
Sbjct: 242 ------------KCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLR 289
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL------VTNCFELNTIVVTAIIDMYCK 268
P++ TM+S+L+ACA LGAI G WIH ++ VTN L T ++IDMY K
Sbjct: 290 SGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT----SLIDMYSK 345
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG E A QVFN++ K L WN+M+FG AM+G N A +FS ++ + +KPD I+F+ +
Sbjct: 346 CGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGL 405
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC+H+G ++ + F MT YKI P ++HY CM+D LG +GL +EAE++I +M +P
Sbjct: 406 LSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEP 465
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D +IW SLL AC+ HGN+E+ ++ A+ + +++ N YVL+SN+YA + ++ E R
Sbjct: 466 DGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRG 525
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
L+ + ++K PGCS IE+D VHEF+ G + HP+ E+Y +L ++ +L+QE G
Sbjct: 526 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAG 578
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 266/514 (51%), Gaps = 51/514 (9%)
Query: 27 LAFCT-SPAGD-INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPI 84
L FC SP + + YA VF I++PNL IWNT+ RG + S P +A+ L++ M ++ +
Sbjct: 1 LEFCILSPHFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCM-ISLGL 59
Query: 85 QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL 144
P T+P L K+ A+L +++G Q+HG V+K G E D ++H ++I MY L +A
Sbjct: 60 LPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHK 119
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+FD + DVV++ +++ G A G I+ +R +FD++ ++ VSWN+MISGYV +KE
Sbjct: 120 VFDR-SSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKE 178
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
ALELF+EM + N++P E TMV++++A A+ G+I G +H+++ + F N +V A+ID
Sbjct: 179 ALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALID 238
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
Y KCG E A +F + K + WN ++ G EA+ LF + S P+ ++
Sbjct: 239 FYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVT 298
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYK-IKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+++L AC H G ++ + + + K + + + ++D + G +E A ++ S
Sbjct: 299 MLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNS 358
Query: 384 M-----PS-----------------------------DPDAIIWGSLLSACRKHGNIEMA 409
M P+ PD I + LLSAC G +++
Sbjct: 359 MLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLG 418
Query: 410 KQAAKQIIELDK--NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
+ + + K + Y M +L S F+EA EE + ++ + CSL++
Sbjct: 419 RHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEA-EEMISTMTMEPDGVIWCSLLKA- 476
Query: 468 GEVHEFVAGG--------RLHPKAPEVYLLLNDL 493
++H V G ++ P P Y+LL+++
Sbjct: 477 CKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNI 510
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/492 (37%), Positives = 292/492 (59%), Gaps = 11/492 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH L+K + + + ++A GDI +A VF ++ + +N++I G+ +
Sbjct: 145 KQIHGLLMKLEIGSNLFLLNCLIAMYLR-CGDIEFARQVFDRMPIQDSVSYNSMIDGYVK 203
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRL-TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
S T A LF M P++ + L ++ S+ +AQ +DG L + ++ E D
Sbjct: 204 SGTIDLARELFDSM----PLEDKNLISWNSMLGGFAQ---TKDGIGLALELFEKMPERDL 256
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
NTII +A CG + A +F+ + DV++W++MI G AK G+I +R LFD+M
Sbjct: 257 VSWNTIIGGFAKCGRIEFAHSLFNRMPKR-DVISWSNMIDGYAKLGDIKVARTLFDEMPD 315
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQGEW 242
++ V++N++++GY +N + EALE+F EMQ Q N+ P E T+V L+A ++LG + +
Sbjct: 316 KDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAAS 375
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+HN+ + N + V A+IDMY KCG E A+ +F+ V +KG+ WN+M+ G+A NG
Sbjct: 376 MHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGL 435
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
A + + ++KPD I+FI VL AC H+G V + F LM + +K++P ++HY
Sbjct: 436 GKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYG 495
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD LG+AGL+E A K I MP +P+ IIW +LLSAC+ H N + + AK ++ +D
Sbjct: 496 CMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGELIAKHLMTMDSC 555
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
S YVL+SN+YA + A + R++MK+ + K PGCS IE++G VHEF+ + HP
Sbjct: 556 NSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWIELEGVVHEFLVRDKSHPY 615
Query: 483 APEVYLLLNDLG 494
E+Y +L+ G
Sbjct: 616 VSEIYSVLDGFG 627
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 232/451 (51%), Gaps = 59/451 (13%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRI-LAFCTSPAGD-INYA-YLVFTQ-----IKKPNL-- 52
D+ ++HA +IKTG K+ ++I L +SP + +A Y+ FT+ I++ +L
Sbjct: 29 DVNQVHARIIKTGYLKNSSLTTKIILNSISSPHKPLVEFARYVFFTRYAVQRIRRNHLDD 88
Query: 53 --FIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQL 110
F+WN +I+ +S + P A++LF M++ + + ++ + KA A++ L +G Q+
Sbjct: 89 DPFLWNAVIKSYSHGNEPVRALVLFC-MMLENGFCVDKFSFSLILKACARVCLVEEGKQI 147
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
HG ++K + + F+ N +I MY CG + AR +FD + + D V++NSMI G K G
Sbjct: 148 HGLLMKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQ-DSVSYNSMIDGYVKSGT 206
Query: 171 IDESRRLFDKMV--SRNTVSWNSMISGYVRNVK-FKEALELFREMQEQNIKPSEFTMVSL 227
ID +R LFD M +N +SWNSM+ G+ + ALELF +M E+++ + ++
Sbjct: 207 IDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMPERDL----VSWNTI 262
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
+ AK G I E+ H+ L + + I + +ID Y K G + A +F+ +P K +
Sbjct: 263 IGGFAKCGRI---EFAHS-LFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKDV 318
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYISFIAVLTACNHSGKVNQA---KD 343
+N+++ G A NGY EA+++F +Q SNL PD + + L+A + G V +A +
Sbjct: 319 VAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMHN 378
Query: 344 YF--TLMTETYKI-------------------------KPSIKHYSCMVDALGRAGLLEE 376
YF ++ T K+ + I H++ M+ + R GL +
Sbjct: 379 YFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQKGIDHWNAMISGMARNGLGKL 438
Query: 377 AEKLIRSM---PSDPDAIIWGSLLSACRKHG 404
A ++ M PD I + +L+AC G
Sbjct: 439 AFGMLLEMHRLSVKPDGITFIGVLNACAHAG 469
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 18/261 (6%)
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
WN++I Y + AL LF M E +F+ +L ACA++ + +G+ IH L+
Sbjct: 93 WNAVIKSYSHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEGKQIHGLLM 152
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
N ++ +I MY +CG E A QVF+ +P + +NSM+ G +G + A +
Sbjct: 153 KLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARE 212
Query: 309 LFSG--LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP--SIKHYSCM 364
LF L+ NL IS+ ++L G Q KD L E ++ P + ++ +
Sbjct: 213 LFDSMPLEDKNL----ISWNSML------GGFAQTKDGIGLALELFEKMPERDLVSWNTI 262
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
+ + G +E A L MP D I W +++ K G+I++A+ ++ DK+
Sbjct: 263 IGGFAKCGRIEFAHSLFNRMPKR-DVISWSNMIDGYAKLGDIKVARTLFDEMP--DKDVV 319
Query: 425 CGYVLMSNLYAASYQFEEAME 445
+M+ YA + + EA+E
Sbjct: 320 AFNTIMAG-YAQNGYYTEALE 339
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/431 (37%), Positives = 261/431 (60%), Gaps = 34/431 (7%)
Query: 73 LLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYM 132
L F ++ + + P + ++ + ++ A G A+ G H +++K G E+D + ++
Sbjct: 15 LGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDF 74
Query: 133 YANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT--VSWN 190
YA G+ ++E+R LFD M RN+ V+WN
Sbjct: 75 YAKHGY--------------------------------VEEARNLFDNMTERNSNSVTWN 102
Query: 191 SMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN 250
+MIS YV+ +F A+ +F++MQ +N+KP+E TMVSLL+ACA LGA+ GEWIH ++ T
Sbjct: 103 TMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTK 162
Query: 251 CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLF 310
+++ ++ A+IDMYCKCG E A+ VF+ + +K + CWNS++ GL MNG EAI F
Sbjct: 163 RLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAF 222
Query: 311 SGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGR 370
++ +KPD ++F+ +L+ C+HSG ++ + YF+ M Y ++P ++HY CMVD LGR
Sbjct: 223 IVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGR 282
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLM 430
AG L+EA +LIR+MP P++++ GSLL AC+ H + ++ +Q +Q++ELD + YV +
Sbjct: 283 AGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFL 342
Query: 431 SNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLL 490
SNLYA+ ++++ R LM + + K PGCS IEV+ VHEFVAG HP+ ++ L
Sbjct: 343 SNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFL 402
Query: 491 NDLGLLIQEMG 501
+++ ++ G
Sbjct: 403 DEIAKELKGQG 413
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Query: 7 IHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
IH ++ L D + + ++ +C G + A VF + + N+F WN+II G +
Sbjct: 155 IHGYIRTKRLKIDVVLGNALIDMYC--KCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMN 212
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QGLEFDQF 124
AI FI ++ I+P +T+ + + GL G + ++ GLE
Sbjct: 213 GRGEEAIAAFI-VMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVE 271
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG-LAKCGEIDESRRLFDKMVS 183
+ ++ + G+L EA + + + NSM++G L + +I + +L +++
Sbjct: 272 HYGCMVDLLGRAGYLKEALELIRAMPMK-----PNSMVLGSLLRACQIHKDTKLGEQVTQ 326
Query: 184 R 184
+
Sbjct: 327 Q 327
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 283/474 (59%), Gaps = 10/474 (2%)
Query: 26 ILAFCTSPAGDINYAYLVFTQIK--KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSP 83
I+ +C + G++ A +F Q++ + WN++I G++ + A+ +F D+L+
Sbjct: 215 IVGYCEN--GNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEG 272
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR 143
I+ T S+ A A + R G ++H + V +GL ++ F+ ++ MY+ C L A+
Sbjct: 273 IEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQ 332
Query: 144 LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM----VSRNTVSWNSMISGYVRN 199
L FD V TE D WN +I G A C +++ + L KM N +WN +ISG+V N
Sbjct: 333 LAFDGV-TERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVEN 391
Query: 200 VKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV 259
+ AL LF EMQ +++P +T+ +L ACA+L I +G+ +H + +EL+ +
Sbjct: 392 GHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIG 451
Query: 260 TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK 319
A++DMY KCG + A+QV+N + L N+M+ AM+G+ +E I LF + + +
Sbjct: 452 AALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFR 511
Query: 320 PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
PD+++F++VL++C H+G V ++F LMT Y + PS+KHY+C+VD L RAG L+EA +
Sbjct: 512 PDHVTFLSVLSSCVHAGAVETGHEFFDLMT-YYNVTPSLKHYTCIVDLLSRAGRLDEAYE 570
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQ 439
L++ +P PD+++WG+LL C GN+E+ + AA+ +IEL+ N + YVL++NLYA + +
Sbjct: 571 LVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGR 630
Query: 440 FEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+ + R ++K+ + K PGCS IE ++H F++ + H K ++Y L++L
Sbjct: 631 WHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNL 684
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 213/441 (48%), Gaps = 65/441 (14%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HAH +KTG +++L G ++ A LVF ++ + NL+ W I+
Sbjct: 79 KQVHAHTLKTGFHGHEFVETKLLQM-YGRFGCLDDANLVFVKMPQRNLYSWTAILSVHVD 137
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ LF + L I + +P + K L + G QLHG V+K+
Sbjct: 138 HGYFEEALSLF-EKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKR------- 189
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM--V 182
C + A +F + +VV++N+MI+G + G +++++ LFD+M V
Sbjct: 190 -----------CADMGSALKIFSGFSVK-NVVSYNTMIVGYCENGNVEKAKELFDQMELV 237
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFRE-MQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++T+SWNSMISGY N+ F EAL +FR+ + E+ I+ FT+ S+L ACA + ++R+G+
Sbjct: 238 GKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGK 297
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKC-----------GCPERALQVFNTVPKKGLSC- 289
+H V NT V A+++MY KC G ER +N V G +C
Sbjct: 298 EVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWN-VLISGYACC 356
Query: 290 ------------------------WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
WN ++ G NG+ A++LF+ +Q+S+L+PD +
Sbjct: 357 NQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTV 416
Query: 326 IAVLTACNHSGKVNQAKD-YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
+L AC + + K + + + Y++ I + +VD + G ++ A ++ +
Sbjct: 417 GIILPACARLATIARGKQVHAHSIRQGYELDVHIG--AALVDMYAKCGSIKHAMQVYNRI 474
Query: 385 PSDPDAIIWGSLLSACRKHGN 405
S+P+ + ++L+A HG+
Sbjct: 475 -SNPNLVSQNAMLTAYAMHGH 494
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T SLL +C L G+ +H + F + V T ++ MY + GC + A VF +
Sbjct: 64 TYASLLESCRTLNL---GKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKM 120
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN--------- 333
P++ L W +++ +GY EA+ LF LQ ++ ++ F VL C
Sbjct: 121 PQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGR 180
Query: 334 --HSGKVNQAKDYFTLMT--ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP-SDP 388
H + + D + + + +K + Y+ M+ G +E+A++L M
Sbjct: 181 QLHGVVIKRCADMGSALKIFSGFSVKNVVS-YNTMIVGYCENGNVEKAKELFDQMELVGK 239
Query: 389 DAIIWGSLLSA 399
D I W S++S
Sbjct: 240 DTISWNSMISG 250
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 179/460 (38%), Positives = 273/460 (59%), Gaps = 4/460 (0%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +IHAH ++ GL + + ++ C S I YA +F+Q PN+F++N+II+ S
Sbjct: 25 LTQIHAHFLRHGLHQSNQILAHFISVCAS-FNRIAYADRLFSQSHNPNIFLFNSIIKAHS 83
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
S ++LLF M I P + T+ L K+ A L G + V ++G
Sbjct: 84 LSVPFHQSLLLFSSM-KNHRIVPDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGFYCFG 142
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
I ++ +Y C + +A MFDE+ DVV WN MI G K G +D LF +M
Sbjct: 143 SIRIGVVELYVCCEKMEDAWKMFDEMSHR-DVVVWNLMIRGFCKTGNVDFGLCLFRQMSE 201
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ VSWN++IS +N + EALELF++M+E KP E T+V++L C++LGA+ G+ I
Sbjct: 202 RSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQRI 261
Query: 244 HNFLVTNCFELN-TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
H++ + + T V ++ID YCKCG E+A +F + K + WN+++ G A+NG
Sbjct: 262 HSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVSWNTIILGFALNGK 321
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
AI LF ++ LKP+ +F+AVLTAC HSG + + ++ F+ M E Y+I+P ++H+
Sbjct: 322 GEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHFG 381
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD LGR G +EEA KLI+SMP P+A +WG++L ACR HGN+++A+ A K++I L+
Sbjct: 382 CMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKLAEMAVKELISLEPW 441
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS 462
S YVL+SN+ A ++EE R M+E ++K PG S
Sbjct: 442 NSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 481
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 181/509 (35%), Positives = 299/509 (58%), Gaps = 20/509 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++ HA ++ GL + A++++A S +GD++ A +VF +I P+ ++N+IIR +++
Sbjct: 97 QQAHAQIVLHGLQPNAFLAAKMVAMYAS-SGDLDSAVVVFDRIDNPSSLLYNSIIRAYTR 155
Query: 65 SSTPRN--------AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
A + F+ +L T P + K+ A L G +HG+ ++
Sbjct: 156 HGXXXXXXXXLEAYARMHFLGLL------GDNFTLPFVLKSCADLSRVCMGRCVHGQGLR 209
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
GLE D ++ ++I MY CG + +AR +FD++ D+ +WN++I G K GEI +
Sbjct: 210 VGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMASWNALIAGYMKEGEIGVAED 268
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN--IKPSEFTMVSLLNACAKL 234
LF++M RN VSW +MISGY +N ++AL LF EM + +KP+ T+VS+L ACA+
Sbjct: 269 LFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQS 328
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG--LSCWNS 292
A+ +G IH+F LN+ V TA+ MY KC A F+ + + G L WN+
Sbjct: 329 AALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNT 388
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
M+ A +G EA+ +F + + ++PD ++F+ +L+ C+HSG ++ ++F M +
Sbjct: 389 MITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIH 448
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
++P ++HY+C+VD LGRAG L EA++LI MP +WG+LL+ACR H N+E+A+ A
Sbjct: 449 SVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELA 508
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A+++ L+ + S YVL+SNLYA + +EE + R L+K ++K PGCS IE++G+ H
Sbjct: 509 ARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHL 568
Query: 473 FVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
F+ + HP+A E+Y L L I+ G
Sbjct: 569 FMGADKSHPQAKEIYKFLEALPEKIKMAG 597
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 141/320 (44%), Gaps = 42/320 (13%)
Query: 67 TPRNAILLFIDMLVTSPIQ--PQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
TP+ ++ L + +L+ +Q P +Y +F+ + + G Q H ++V GL+ + F
Sbjct: 54 TPKPSLNLQLRILLQPILQHFPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAF 113
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA+ G L A ++FD +D
Sbjct: 114 LAAKMVAMYASSGDLDSAVVVFDRIDNP-------------------------------- 141
Query: 185 NTVSWNSMISGYVRN---VKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+++ +NS+I Y R+ LE + M + FT+ +L +CA L + G
Sbjct: 142 SSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGR 201
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H + E + V ++IDMY KCG A ++F+ + + ++ WN+++ G G
Sbjct: 202 CVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEG 261
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT-LMTETYKIKPSIKH 360
A LF ++ N+ +S+ A+++ +G QA F ++ + ++KP+
Sbjct: 262 EIGVAEDLFERMEHRNI----VSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVT 317
Query: 361 YSCMVDALGRAGLLEEAEKL 380
++ A ++ LE ++
Sbjct: 318 IVSVLPACAQSAALERGRRI 337
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 286/504 (56%), Gaps = 6/504 (1%)
Query: 1 MKDL---KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
+KDL KK+ + + G+ + + + +L GD+ +F + NL ++NT
Sbjct: 236 LKDLELGKKVCNLMTELGVKSNTLVVNALLDM-YMKCGDMYAVREIFDEFSDKNLVMYNT 294
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
I+ + Q +L+ +D ++ +P ++T S A AQLG G H V +
Sbjct: 295 IMSNYVQHGLA-GEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRN 353
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GLE I N II MY CG A +FD + + VV WNS+I GL + GE++ + R+
Sbjct: 354 GLERLDNISNAIIDMYMKCGKREAACKVFDSMSNK-TVVTWNSLIAGLVRDGELELALRI 412
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
F +M N VSWN+MI V+ F+EA++L REMQ Q IK TMV + +AC LGA+
Sbjct: 413 FGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGAL 472
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
+WI+ ++ N ++ + TA++DM+ +CG P A++VF + K+ +S W + +
Sbjct: 473 DLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVK 532
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A+ G AI+LF + ++K D F+A+LTA +H G V+Q + F M + + + P
Sbjct: 533 AVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQ 592
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I HY CMVD LGRAGLLEEA L++SMP P+ +IWGS L+ACRKH N+E A A ++I
Sbjct: 593 IVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKIT 652
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+L + +VL+SN+YA++ ++ + RL MKE +K G S IEV G + EF +G
Sbjct: 653 QLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGD 712
Query: 478 RLHPKAPEVYLLLNDLGLLIQEMG 501
H + ++ L+L ++ I ++G
Sbjct: 713 ESHTENAQIGLMLQEINCRISQVG 736
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 228/460 (49%), Gaps = 56/460 (12%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAG--DINYAYLVFTQIK--KPNLFIWNTI 58
+LK++H +++K G+ ++++A C +NYA F + + K +L+ NT+
Sbjct: 37 ELKQLHCNMLKKGV----FNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTL 92
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IRG++ S + AI +++ M++ I P T+P L A +++ +G Q+HG VVK G
Sbjct: 93 IRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMG 152
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L D F+ N++I+ YA CG++D R++F
Sbjct: 153 LVKDLFVANSLIHFYA--------------------------------ACGKVDLGRKVF 180
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D+M+ RN VSW S+I+GY KEA+ LF EM E ++P+ TMV ++ACAKL +
Sbjct: 181 DEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLE 240
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+ + N + + NT+VV A++DMY KCG ++F+ K L +N+++
Sbjct: 241 LGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYV 300
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G E + + + +PD ++ ++ + AC G ++ K + Y + +
Sbjct: 301 QHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKS-----SHAYVFRNGL 355
Query: 359 KHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+ + ++D + G E A K+ SM S+ + W SL++ + G +E+ A +
Sbjct: 356 ERLDNISNAIIDMYMKCGKREAACKVFDSM-SNKTVVTWNSLIAGLVRDGELEL---ALR 411
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
E+ ++ + M + FEEA++ L++E++
Sbjct: 412 IFGEMPESNLVSWNTMIGAMVQASMFEEAID---LLREMQ 448
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/501 (35%), Positives = 280/501 (55%), Gaps = 38/501 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+++H+ I+ GL D ++ A C S G + A +F QI N+F W +I G
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKC-SVDGSMCAARKIFDQILDHNVFSWTAMITG 349
Query: 62 FSQSST-PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ Q A+ LF M++T I P T+ S KA A L R G Q+ VK G
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVI-PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFS 408
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N++I MYA + G ID++R+ FD
Sbjct: 409 SVNCVANSLISMYA--------------------------------RSGRIDDARKAFDI 436
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ +N +S+N++I Y +N+ +EALELF E+++Q + S FT SLL+ A +G I +G
Sbjct: 437 LFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKG 496
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
E IH ++ + +LN V A+I MY +CG E A QVF + + + W S++ G A +
Sbjct: 497 EQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKH 556
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ +A++LF + ++P+ +++IAVL+AC+H G VN+ +F M + + P ++H
Sbjct: 557 GFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEH 616
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+CMVD LGR+G L EA + I SMP DA++W + L ACR HGN+E+ K AAK IIE +
Sbjct: 617 YACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQE 676
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
++ Y+L+SNLYA++ +++E R MKE + KE GCS +EV+ +VH+F G H
Sbjct: 677 PHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSH 736
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
PKA E+Y L +L + I+++G
Sbjct: 737 PKAAEIYDELQNLSVKIKKLG 757
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 195/415 (46%), Gaps = 36/415 (8%)
Query: 7 IHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
I ++KTG L D ++ GD+ A+ VF ++ + N W +I Q
Sbjct: 190 IFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
AI LF++M++ S +P R T + A A + L G QLH + ++ GL D+ +
Sbjct: 250 GYAGEAIDLFLEMIL-SGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCV 308
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+I MYA C VD G + +R++FD+++ N
Sbjct: 309 GCCLINMYAKC-----------SVD------------------GSMCAARKIFDQILDHN 339
Query: 186 TVSWNSMISGYVRNVKF-KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
SW +MI+GYV+ + +EAL+LFR M ++ P+ FT S L ACA L A+R GE +
Sbjct: 340 VFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF 399
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
V F V ++I MY + G + A + F+ + +K L +N+++ A N
Sbjct: 400 THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSE 459
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIKPSIKHYSC 363
EA++LF+ ++ + +F ++L+ G + + + + ++ K+ S+ +
Sbjct: 460 EALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSV--CNA 517
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
++ R G +E A ++ M D + I W S+++ KHG A + +++E
Sbjct: 518 LISMYSRCGNIESAFQVFEDM-EDRNVISWTSIITGFAKHGFATQALELFHKMLE 571
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 33/259 (12%)
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
++ +V P TY K + G +H ++ + L+ D N++I +Y+
Sbjct: 54 LEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSK 113
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
CG +A +F + + D+++W++M+ A
Sbjct: 114 CGQWEKATSIFQLMGSSRDLISWSAMVSCFAN---------------------------- 145
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV-TNCFEL 254
N+ F+ AL F +M E P+E+ + AC+ + G+ I F+V T +
Sbjct: 146 --NNMGFR-ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQS 202
Query: 255 NTIVVTAIIDMYCKC-GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL 313
+ V +IDM+ K G A +VF +P++ W M+ L GY EAI LF +
Sbjct: 203 DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEM 262
Query: 314 QSSNLKPDYISFIAVLTAC 332
S +PD + V++AC
Sbjct: 263 ILSGYEPDRFTLSGVISAC 281
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 5/211 (2%)
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
+ N + +A+ M Q P T L C + + G +H L + +L++
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
+ + ++I +Y KCG E+A +F + + L W++MV A N A+ F +
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL--GRAGL 373
+ P+ F A AC+ + V+ F + +T ++ + ++D GR L
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 374 LEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ A K+ MP + +A+ W +++ + G
Sbjct: 222 V-SAFKVFEKMP-ERNAVTWTLMITRLMQFG 250
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/459 (36%), Positives = 268/459 (58%), Gaps = 43/459 (9%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G IN A +F +I ++ WN +I G+ ++ + A+ L+ DM+ T+ ++P T ++
Sbjct: 145 GYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTN-VKPDESTMVTV 203
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A AQ G G QLH + G + I N +I +Y+
Sbjct: 204 VSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYS-------------------- 243
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
KCGE++ + LF + ++ +SWN++I G+ +KEAL LF+EM
Sbjct: 244 ------------KCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLR 291
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL------VTNCFELNTIVVTAIIDMYCK 268
P++ TM+S+L ACA LGAI G WIH ++ VTN L +T++IDMY K
Sbjct: 292 SGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSL----LTSLIDMYAK 347
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG E A QVF+++ + LS WN+M+FG AM+G N A LFS ++ + + PD I+F+ +
Sbjct: 348 CGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGL 407
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC+HSG ++ + F M++ YKI P ++HY CM+D LG GL +EA+++IR+MP +P
Sbjct: 408 LSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEP 467
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D +IW SLL AC+ H N+E+ + A+ +I+++ YVL+SN+YA + ++++ + R
Sbjct: 468 DGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRT 527
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
L+ + I+K PGCS IE+D VHEF+ G + HP+ E+Y
Sbjct: 528 LLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIY 566
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 126/267 (47%), Gaps = 36/267 (13%)
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+ + N + WN+M G+ N AL+L+ M + P+ ++ LL +CAK A
Sbjct: 21 IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ +G+ IH ++ ++L+ V T++I MY + G E A +VF+ + + + +++ G
Sbjct: 81 LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140
Query: 297 LAMNGYEN-------------------------------EAIKLFSGLQSSNLKPDYISF 325
A GY N EA++L+ + +N+KPD +
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ V++AC SG + + + + E + +IK + ++D + G +E A L + +
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWI-EDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGL- 258
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQA 412
+ D I W +L+ H ++ + K+A
Sbjct: 259 AKKDVISWNTLIGG---HTHMNLYKEA 282
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 184/508 (36%), Positives = 293/508 (57%), Gaps = 48/508 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDP--IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTI 58
+ LK+IHA I+ + SRIL S D +YA VF QI PN F+WNT+
Sbjct: 38 LSKLKQIHAQAIRNFSTHNSSLFLYSRILH--VSSLIDFDYACRVFNQIDNPNSFMWNTL 95
Query: 59 IRGFSQS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
I ++S AI +F ML ++P + T+P L KA A + +G Q H ++ K
Sbjct: 96 IGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKL 155
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GL+ D ++ N++I++Y A CG + + ++
Sbjct: 156 GLDLDVYVGNSLIHLY--------------------------------ASCGCLSMALKV 183
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
F+KM R+ VSWN MI YV++ F+ AL+LF EMQ + +P +TM S+++ACA +GA+
Sbjct: 184 FEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQ-NSFEPDGYTMQSIVSACAGIGAL 242
Query: 238 RQGEWIHNFLV---TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G W H +++ + + ++ ++++DMY KCG A QVF T+PK L+ WNSM+
Sbjct: 243 SLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMI 302
Query: 295 FGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
LAM+G A++ FS L + P+ ++F+ VL+ACNH G V + YF +M YK
Sbjct: 303 LALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNHGGMVADGRKYFDMMVNDYK 362
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSAC-RKHGNIEMAKQA 412
I+P ++HY C+VD L R+G ++EA +L+ +M PDA+IW SLL AC +++ +E++++
Sbjct: 363 IEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDACYKQNAGVELSEEV 422
Query: 413 AKQIIELDKNESCG-YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
A +I++ +K S G YV++S +YA++ Q+ + R +M ++ + KEPGCS IE+DG H
Sbjct: 423 AFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTDMGVTKEPGCSSIEIDGISH 482
Query: 472 EFVAGGRLHPKAPEVYLLLNDLGLLIQE 499
EF AG HP+ E+Y +++ LI+E
Sbjct: 483 EFFAGDTSHPRIKEIYGVID----LIEE 506
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 295/527 (55%), Gaps = 38/527 (7%)
Query: 10 HLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPR 69
+L L +D + + +L+ + +G I F ++ + +NT I GFS +S P+
Sbjct: 79 NLFDKMLKRDXFSWNALLS-AYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQ 137
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
++ LF M +P T S+ A AQL R G Q+HG ++ + + FI N +
Sbjct: 138 ESLELFKRM-QREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNAL 196
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK---------------------- 167
MYA CG + +AR +FD + T+ ++V+WN MI G AK
Sbjct: 197 TDMYAKCGEIEQARWLFDCL-TKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPD 255
Query: 168 -------------CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
CG +DE+RR+F + ++ V W +M+ GY +N + ++AL LF EM
Sbjct: 256 QVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLL 315
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
++I+P +T+ S++++CAKL ++ G+ +H + N +V +A+IDMY KCG +
Sbjct: 316 EHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDD 375
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VFN +P + + WN+M+ G A NG++ +A++LF + KPD ++FI +L+AC H
Sbjct: 376 ARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLH 435
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+ Q ++YF ++ + + P++ HY+CMV+ LGR G +E+A LI++M DPD +IW
Sbjct: 436 CNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWS 495
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
+LLS C G+I A+ AA+ + ELD + Y+++SN+YA+ ++++ R LMK
Sbjct: 496 TLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKN 555
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++K G S IE+D EVH F + R HP++ ++Y LN L +QE G
Sbjct: 556 VKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEG 602
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 161/284 (56%), Gaps = 9/284 (3%)
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+HN ++++YA G L +A+ +FD++ + D +WN+++ AK G I + FD+M
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKM-LKRDXFSWNALLSAYAKSGSIQNLKATFDRM 115
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R++VS+N+ I+G+ N +E+LELF+ MQ + +P+E+T+VS+LNA A+L +R G+
Sbjct: 116 PFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGK 175
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH ++ F N + A+ DMY KCG E+A +F+ + KK L WN M+ G A NG
Sbjct: 176 QIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNG 235
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ I L ++ S PD ++ ++ A G+V++A+ F+ E I +
Sbjct: 236 QPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKE-----KDIVCW 290
Query: 362 SCMVDALGRAGLLEEAEKLIRSM---PSDPDAIIWGSLLSACRK 402
+ M+ + G E+A L M +PD+ S++S+C K
Sbjct: 291 TAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAK 334
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/498 (34%), Positives = 291/498 (58%), Gaps = 35/498 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H+ ++ GL D + +LA + GD+ A +VF ++ + +L WNT+I G+++
Sbjct: 181 RRVHSEVVVCGLESDIYVGNSLLAM-YAKFGDMGTARMVFDRMAERDLTSWNTMISGYAK 239
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQ 123
++ A L+F D++ + + T L A A L ++G +HG V+ + +++
Sbjct: 240 NADSGTAFLVF-DLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNK 298
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F N++I MY NC N M+ ++RRLF+++
Sbjct: 299 FFTNSLIEMYCNC----------------------NCMV----------DARRLFERVRW 326
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
++TVSWNSMI GY RN E+L LFR M P + T +++L AC ++ A+R G I
Sbjct: 327 KDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSI 386
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H++LV F+ NTIV TA++DMY KCG + +VF+ +P K L W++MV G ++G
Sbjct: 387 HSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRG 446
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EAI + G++++++ PD F ++L+AC+H+G V + K+ F M + Y +KP++ HYSC
Sbjct: 447 REAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSC 506
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG L+EA +IR+M P + IW +LL+A R H NI++A+ +A+++ +++
Sbjct: 507 MVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKV 566
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
Y+ +SN+YAA ++++ R +++ ++K PGCS IE+D VH F+ G + H +
Sbjct: 567 VSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQT 626
Query: 484 PEVYLLLNDLGLLIQEMG 501
++Y LN+L ++E G
Sbjct: 627 EDIYAKLNELKQQLKEAG 644
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 195/408 (47%), Gaps = 44/408 (10%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K +++HAH+I + ++ + LA + G ++ A ++F I N F+WN +IRG
Sbjct: 76 KQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRG 135
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++ + P +++L+ +ML + TYP + KA L L G ++H VV GLE
Sbjct: 136 YASNGLPMKSLVLYREMLCFGQ-RADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLES 194
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D ++ N+++ MYA G + AR++FD + E D+ +WN+M
Sbjct: 195 DIYVGNSLLAMYAKFGDMGTARMVFDRM-AERDLTSWNTM-------------------- 233
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
ISGY +N A +F M + + T++ LL+ACA L A+++G+
Sbjct: 234 -----------ISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGK 282
Query: 242 WIHNFLVTNCF-ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
IH + V N N ++I+MYC C C A ++F V K WNSM+ G A N
Sbjct: 283 VIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARN 342
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G E+++LF + PD ++FIAVL AC+ + + + +Y +K
Sbjct: 343 GDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALR-----YGMSIHSYLVKKGFDA 397
Query: 361 Y----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ +VD + G L + ++ MP D + W ++++ HG
Sbjct: 398 NTIVGTALVDMYSKCGSLACSRRVFDEMP-DKSLVSWSAMVAGYGLHG 444
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 183/456 (40%), Gaps = 95/456 (20%)
Query: 83 PIQPQRLTY---PSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQFIHNTIIYMYANCGF 138
P+Q LT +L +++ + G QLH ++ LE + +++ + YA CG
Sbjct: 51 PLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGL 110
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
+S+A + +FD +V +N+ WN MI GY
Sbjct: 111 MSQAEV--------------------------------IFDGIVLKNSFLWNFMIRGYAS 138
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
N ++L L+REM + FT +L AC L + G +H+ +V E + V
Sbjct: 139 NGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYV 198
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
+++ MY K G A VF+ + ++ L+ WN+M+ G A N A +F + + L
Sbjct: 199 GNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGL 258
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY---------------SC 363
D + + +L+AC V + K + Y ++ SI +Y +C
Sbjct: 259 FADCTTLLGLLSACADLKAVKEGK-----VIHGYAVRNSIGNYNKFFTNSLIEMYCNCNC 313
Query: 364 MVDA-------------------LG--RAGLLEEAEKLIRSMPSD---PDAIIWGSLLSA 399
MVDA LG R G E+ +L R M D PD + + ++L A
Sbjct: 314 MVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGA 373
Query: 400 CRKHGNIEMAKQAAKQIIE--LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK 457
C + + +++ D N G L+ ++Y+ A R+ ++
Sbjct: 374 CDQIAALRYGMSIHSYLVKKGFDANTIVGTALV-DMYSKCGSL--ACSRRVF------DE 424
Query: 458 EPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
P SL+ VAG LH + E +L+ +
Sbjct: 425 MPDKSLVSWSA----MVAGYGLHGRGREAISILDGM 456
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/488 (35%), Positives = 288/488 (59%), Gaps = 47/488 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K++++ + K+GL P S+I++F + SP G + YA +F N F+ NT+I
Sbjct: 19 VKEVEQTQCLITKSGLFNHPFVISKIISFLSLSPLGSLVYAQAIFEDTTMDNPFVCNTMI 78
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA-------------QLGLARD 106
R +++S P AI L+ + + I+ YP KA A QL +A
Sbjct: 79 RAYAKSVFPIKAIYLY-NFMHRKDIKSDHFMYPFGLKACARVLWCNEGDIKCTQLDIACK 137
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD---------------- 150
GA++H R+ + GL+ D FI N+++Y+Y+ CGFL AR +FDE+
Sbjct: 138 GAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARRVFDEMTEKTITSWNVMISAYDQ 197
Query: 151 -TEFD-------------VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY 196
+FD VV+WN +I + G+I++++ +F +M R+ VSWNSMI+GY
Sbjct: 198 INDFDSADSLIGSMPGKNVVSWNMLIARYIRLGKIEDAKAVFQEMPERDAVSWNSMIAGY 257
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
V+ + AL LFREM+ N++ ++ T++S+L ACA+ GA+ G IH L +++
Sbjct: 258 VQIKDYARALALFREMEIANVEATDITLISVLGACAETGALEIGRKIHLSLKQREYKIEG 317
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
+ A++DMY KCG A +VF+ + K +SCWN+M+ LA++GY EA++LFS ++ S
Sbjct: 318 YLSNALVDMYAKCGHLNLAWEVFSELKMKHISCWNAMIVSLAVHGYCEEALRLFSTMEMS 377
Query: 317 --NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
+P+ ++FI VL AC+H G V++ + +F M YKI P IKHY CMVD L R GLL
Sbjct: 378 VDGARPNRVTFIGVLIACSHKGLVDEGRKFFNRMVNEYKIMPDIKHYGCMVDLLSRCGLL 437
Query: 375 EEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLY 434
+EA +I++MP + ++++W +LL ACR H ++++A+++ +Q+ +++ YVL+SN+Y
Sbjct: 438 KEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLGKMEPLRDGDYVLLSNIY 497
Query: 435 AASYQFEE 442
A + ++ +
Sbjct: 498 AEAQRWND 505
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/408 (40%), Positives = 252/408 (61%), Gaps = 5/408 (1%)
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
L ++YA LG L GR + F II+ +A G + A+ +FD + E
Sbjct: 68 LQRSYASLGRLDYSVALFGRTQNPSV----FFWTAIIHGHALRGDVVSAQQLFDTM-PEK 122
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+V+ +M+ AK GE+D +R LFD M R+ V WN MI GY +N EAL LFR M
Sbjct: 123 SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRML 182
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ KP+E T++S+L+AC +LGA+ G W+H+++ N + N V TA++DMY KCG E
Sbjct: 183 KAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLE 242
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A VF+ + K + WNSM+ G AM+G+ EA++LF + L P I+FI +L+AC
Sbjct: 243 DARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACG 302
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
HSG V + D F M + Y I+P I+HY CMV+ LGRAG +E+A +L+++M +PD ++W
Sbjct: 303 HSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLW 362
Query: 394 GSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEV 453
G+LL ACR HG I + ++ + +++ + S Y+L+SN+YAA ++ R +MK+
Sbjct: 363 GTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDS 422
Query: 454 KIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++KEPGCS IEV+ +VHEF+AGG HPK E+Y++L ++ ++ G
Sbjct: 423 GVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHG 470
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 146/321 (45%), Gaps = 66/321 (20%)
Query: 30 CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRL 89
C + G+++ A ++F +++ + WN +I G++Q+ P A++LF ML + +P +
Sbjct: 133 CYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRML-KAKAKPNEV 191
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T S+ A QLG G +H + G++F+ + ++ MY+ CG L +ARL+FD++
Sbjct: 192 TVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKI 251
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
D + DVVAWNSMI+G A G F +EAL+LF
Sbjct: 252 DDK-DVVAWNSMIVGYAMHG--------FS-----------------------QEALQLF 279
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
+ M + P+ T + +L+AC G + +G I N
Sbjct: 280 KSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFN------------------------ 315
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
+ + PK + + MV L G+ +A +L +++ N++PD + + +L
Sbjct: 316 ----KMKDEYGIEPK--IEHYGCMVNLLGRAGHVEQAYEL---VKNMNIEPDPVLWGTLL 366
Query: 330 TACNHSGKVNQAKDYFTLMTE 350
AC GK+ + L+ +
Sbjct: 367 GACRLHGKIALGEKIVELLVD 387
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH L + + + I+ + Y G + ++ +F + W +++ G A+ G
Sbjct: 49 IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGD 108
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
A +LF + +L +S A+LT G+++ A+ F M E + ++
Sbjct: 109 VVSAQQLFDTMPEKSL----VSLTAMLTCYAKHGELDAARVLFDGMEERDGVC-----WN 159
Query: 363 CMVDALGRAGLLEEAEKLIRSM---PSDPDAIIWGSLLSACRKHGNIEMAK 410
M+D + G+ EA L R M + P+ + S+LSAC + G +E +
Sbjct: 160 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGR 210
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 291/507 (57%), Gaps = 19/507 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+++H + ++ A D S ++ A C P A VF + + N+ WN++I
Sbjct: 171 EQVHGLVARSPHADDVHIRSALVDMYAKCERPED----ARRVFDAMPERNVVSWNSLITC 226
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QGLE 120
+ Q+ A++LF++M+ P +T S+ A A L R+G Q+H +VK L
Sbjct: 227 YEQNGPVGEALMLFVEMMAAG-FSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLR 285
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++N ++ MYA CG EAR +FD + + +V+ S++ G AK +++++ +F +
Sbjct: 286 DDMVLNNALVDMYAKCGRTWEARCIFDSMPSR-SIVSETSILTGYAKSANVEDAQVVFSQ 344
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
MV +N ++WN +I+ Y +N + +EA+ LF +++ +I P+ +T ++LNAC + ++ G
Sbjct: 345 MVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLG 404
Query: 241 EWIHNFLVTNCF------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
+ H ++ F E + V +++DMY K G + +VF + + WN+M+
Sbjct: 405 QQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMI 464
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G A NG +A+ LF + SN PD ++ I VL+AC HSG V++ + YF MTE + I
Sbjct: 465 VGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGI 524
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
PS HY+CMVD LGRAG L+EAE+LI MP +PD+++W SLL ACR H N+E+ + A
Sbjct: 525 TPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVELGEWTAG 584
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
++ ELD S YVL+SN+YA ++ E R MK+ + K+PGCS IE+ +++ F+
Sbjct: 585 RLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIEIGRKMNVFL 644
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEMG 501
A + HP E++ N L ++ EMG
Sbjct: 645 ARDKRHPCRNEIH---NTLRIIQMEMG 668
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 189/384 (49%), Gaps = 17/384 (4%)
Query: 74 LFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMY 133
L + +SP+ + P+L A A H R++K + + F+ NT++ Y
Sbjct: 13 LVAHLRASSPLADLLRSAPNLSGARAA----------HARILKSPVAGETFLLNTLVSTY 62
Query: 134 ANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMI 193
A G L +AR +FDE+ + ++N+++ A+ G DE+R LF+ + + S+N+++
Sbjct: 63 ARLGRLRDARRVFDEIPLR-NTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVV 121
Query: 194 SGYVRNVK--FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
+ R+ + +AL M + + ++ S L+ACA R GE +H + +
Sbjct: 122 AALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSP 181
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
+ + +A++DMY KC PE A +VF+ +P++ + WNS++ NG EA+ LF
Sbjct: 182 HADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFV 241
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA 371
+ ++ PD ++ +V++AC + + M + +++ + + +VD +
Sbjct: 242 EMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKC 301
Query: 372 GLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMS 431
G EA + SMPS + S+L+ K N+E A+ Q++E KN VL++
Sbjct: 302 GRTWEARCIFDSMPS-RSIVSETSILTGYAKSANVEDAQVVFSQMVE--KNVIAWNVLIA 358
Query: 432 NLYAASYQFEEAMEERLLMKEVKI 455
YA + + EEA+ + +K I
Sbjct: 359 -AYAQNGEEEEAIRLFVQLKRDSI 381
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 175/414 (42%), Gaps = 73/414 (17%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNA-ILLFIDMLVTSPIQPQRLTYPS 93
G + A +F I P+ +N ++ ++ A L F+ + ++ S
Sbjct: 97 GRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFAS 156
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
A A +R G Q+HG V + D I + ++ MYA C +AR +FD + E
Sbjct: 157 ALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAM-PER 215
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+VV+WNS +I+ Y +N EAL LF EM
Sbjct: 216 NVVSWNS-------------------------------LITCYEQNGPVGEALMLFVEMM 244
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFEL--NTIVVTAIIDMYCKCGC 271
P E T+ S+++ACA L A R+G +H +V C L + ++ A++DMY KCG
Sbjct: 245 AAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMV-KCDRLRDDMVLNNALVDMYAKCGR 303
Query: 272 PERALQVFNTVP-------------------------------KKGLSCWNSMVFGLAMN 300
A +F+++P +K + WN ++ A N
Sbjct: 304 TWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQN 363
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIK--PS 357
G E EAI+LF L+ ++ P + ++ VL AC + + + + ++ E ++ P
Sbjct: 364 GEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPE 423
Query: 358 IKHY--SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ + +VD + G +++ K+ M + D + W +++ ++G + A
Sbjct: 424 SDVFVGNSLVDMYLKTGSIDDGAKVFERMAA-RDNVSWNAMIVGYAQNGRAKDA 476
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/501 (34%), Positives = 294/501 (58%), Gaps = 13/501 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDIN-YAYLVFTQIKKPNLFIWNTII 59
+ +K++HA ++ GL + ++++ T ++ Y +F Q+ PN F++N +I
Sbjct: 59 LTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNALI 118
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA---QLGLARDGAQLHGR-VV 115
RG+ + + F ++ + P T+ +LFKA +GL R Q+HG+ ++
Sbjct: 119 RGYLIEERLKESTE-FYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGR---QIHGQTIL 174
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
G D + N++I MY CGFL R +FDE+ DV++W +I K G ++ +
Sbjct: 175 VGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNR-DVISWTELISAYVKSGNMESAG 233
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
LFD + ++ V+W M+SG+ +N K +EA+ F +MQE ++ E T++ +++ACA+LG
Sbjct: 234 ELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLG 293
Query: 236 AIRQGEWIHNFLVTNCF--ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
A + +WI + + F + + +V +A+IDMY KCG A +VF + ++ + ++SM
Sbjct: 294 AAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSM 353
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ G AM+G ++A+KLF + + +KP+ ++FI VLTAC+H+G V Q F LM + Y
Sbjct: 354 ILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYG 413
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
IKPS HY+CMVD LGRAG L+EA +L+++MP +P +WG+LL ACR H + ++A AA
Sbjct: 414 IKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAA 473
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD-GEVHE 472
+ EL+ Y+L++N+YA+ ++ + R LM+ + K P S IE + G VHE
Sbjct: 474 NHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHE 533
Query: 473 FVAGGRLHPKAPEVYLLLNDL 493
F +G HP++ E+ L DL
Sbjct: 534 FFSGDMTHPRSGEIKQALEDL 554
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 9/240 (3%)
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP--ERALQV 278
E +V+ L+ C L I+Q +H ++ N + + V+ +I K P L +
Sbjct: 46 ESQIVTTLDGCKNLTQIKQ---VHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSI 102
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
FN V +N+++ G + E+ + +S ++ + P +F A+ AC V
Sbjct: 103 FNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDV 162
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
+ + + M+D + G LE K+ MP + D I W L+S
Sbjct: 163 GLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMP-NRDVISWTELIS 221
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
A K GN+E A + L + + +M + +A + + EA+ M+E +E +
Sbjct: 222 AYVKSGNME---SAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETD 278
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/436 (37%), Positives = 267/436 (61%), Gaps = 15/436 (3%)
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQ-------RLTYPSLF-KAYAQLG---LARD-- 106
RG + +A++L LV P Q R +PS++ +A A+L L R
Sbjct: 37 RGGHRHPRLVSALILASLRLVPHPQQTSDHAAALLRRVHPSVYLRAAARLPSHLLRRSLL 96
Query: 107 GAQLHGRVVKQG-LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL 165
G QLH +++ G + D + +++ +Y C +++AR +F E+ DVVAWN MI G
Sbjct: 97 GPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVR-DVVAWNVMIAGY 155
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 225
K G++ +R LFD M RN VSW ++I GY + + +EA+E+FR MQ + I+P ++
Sbjct: 156 VKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALL 215
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
S+L+AC LGA+ GEW+H F+V ++ +IIDMY KCGC E+A++VF + +K
Sbjct: 216 SVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEK 275
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
+ W +++ G A++G +A+++F ++ N+ P+ ++F+A+L+AC+H G + + YF
Sbjct: 276 SVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRWYF 335
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+M Y+IKP ++HY CMVD LGRAG L+EA+ L++ MP +A IWG+LL+A R HG+
Sbjct: 336 NIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGD 395
Query: 406 IEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 465
++ ++A +IEL+ + S Y+L+SN++A ++++ + R MKE + PG S IE
Sbjct: 396 ADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPGASSIE 455
Query: 466 VDGEVHEFVAGGRLHP 481
VDG VHEF + HP
Sbjct: 456 VDGMVHEFTSRDGSHP 471
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 40/290 (13%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
AGD+ +A +F + + N+ W T+I G++Q P A+ +F M V I+P + S
Sbjct: 158 AGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEG-IEPDGVALLS 216
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ A LG G +H VV++GL + + N+II MY CG + +A +F+ ++ E
Sbjct: 217 VLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGME-EK 275
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
VV W ++I G A G +A+E+FR M+
Sbjct: 276 SVVTWTTLIAGFALHG-------------------------------LGLQAVEMFRRME 304
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGC 271
+N+ P++ T +++L+AC+ +G G W N +V+ + + V ++D+ + GC
Sbjct: 305 RENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQ-YRIKPQVEHYGCMVDLLGRAGC 363
Query: 272 PERALQVFNTVP-KKGLSCWNSMVFGLAMNGYEN---EAIKLFSGLQSSN 317
+ A + +P K + W +++ +G + EA+ L+ SN
Sbjct: 364 LKEAQDLVKDMPLKANAAIWGALLAASRTHGDADLGEEALVHLIELEPSN 413
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/487 (35%), Positives = 281/487 (57%), Gaps = 3/487 (0%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+HA K G+ + IL + G I A VF I + L WN++I G+S+
Sbjct: 156 VHAQSFKLGMGSHACVQNAILNIYVA-CGLITSARRVFDDISERTLVSWNSMINGYSKMG 214
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A+L+F +M ++P T L + G G +H +V G+E D +
Sbjct: 215 RSEEAVLMFREMQEVG-LEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVT 273
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N ++ MYA CG L A+ +FD++ + DVV+W MI A G ID + F++M +N
Sbjct: 274 NALMDMYAKCGNLKCAKSVFDQM-LDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNV 332
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSWNS+I +V+ + EA++LF M + + ++ T+V++L++C+ +G + G+ H++
Sbjct: 333 VSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSY 392
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ N L+ + AIIDMY KCG + A+ VF +P+K WN ++ LA++GY EA
Sbjct: 393 IFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEA 452
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
I++F +Q+S + PD I+F +L+AC+HSG V+ + YF +M T+ I P ++HY+CMVD
Sbjct: 453 IEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVD 512
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR GLL EA LI+ MP PD ++W +LL ACR +GN+ + KQ KQ++EL + S
Sbjct: 513 LLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGL 572
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
YVL+SN+Y+ S ++++ ++ + I+K S IE+DG ++F+ + H + +
Sbjct: 573 YVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGASTSI 632
Query: 487 YLLLNDL 493
Y +L L
Sbjct: 633 YSMLGQL 639
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 209/435 (48%), Gaps = 67/435 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K LK +HA +I GLA + ++++ + D+ YA+ +F QI +PN F++N +I+
Sbjct: 49 LKQLKHVHAQIILHGLATQVLTLGKLVS-SSVQLRDLRYAHKLFDQIPQPNKFMFNHLIK 107
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+S SS P ++LL+ M V I P + T P + KA A G +H + K G+
Sbjct: 108 GYSNSSDPIKSLLLYRRM-VCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMG 166
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N I+ +Y CG ++ AR +FD++ +E +V+WNSMI G +K G
Sbjct: 167 SHACVQNAILNIYVACGLITSARRVFDDI-SERTLVSWNSMINGYSKMG----------- 214
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ +EA+ +FREMQE ++P FT+V LL+ K G G
Sbjct: 215 --------------------RSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLG 254
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCG---CPER----------------------- 274
++H +V E+++IV A++DMY KCG C +
Sbjct: 255 RFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANH 314
Query: 275 -----ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
AL+ FN +P K + WNS+++ G EA+ LF + S + + + +A+L
Sbjct: 315 GLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAIL 374
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
++C+H G + K + + + I S + ++D + G L+ A + MP + +
Sbjct: 375 SSCSHMGDLALGKQAHSYIFDN-NITLSATLCNAIIDMYAKCGALQTAMDVFFGMP-EKN 432
Query: 390 AIIWGSLLSACRKHG 404
A+ W ++ A HG
Sbjct: 433 AVSWNVIIGALALHG 447
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/502 (35%), Positives = 291/502 (57%), Gaps = 12/502 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++ + +I +GL+ ++L FCT +++YA +F + PN ++ ++
Sbjct: 37 LNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLT 96
Query: 61 GFSQSSTPRNA--ILLFIDMLVTSPI-QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+S SS P +A F ++V + +P YP + K+ L A +H + K
Sbjct: 97 AYS-SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKS 155
Query: 118 GLEFDQFIHNTIIYMYAN-CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G + +++ YA+ ++ AR +FDE+ +E +VV+W +M+ G A+ G+I +
Sbjct: 156 GFHLYVVVQTALLHSYASSVSHITLARQLFDEM-SERNVVSWTAMLSGYARSGDISNAVA 214
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLG 235
LF+ M R+ SWN++++ +N F EA+ LFR M E +I+P+E T+V +L+ACA+ G
Sbjct: 215 LFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTG 274
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
++ + IH F + V +++D+Y KCG E A VF KK L+ WNSM+
Sbjct: 275 TLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMIN 334
Query: 296 GLAMNGYENEAIKLFSGLQSSNL---KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
A++G EAI +F + N+ KPD+I+FI +L AC H G V++ + YF LMT +
Sbjct: 335 CFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF 394
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
I+P I+HY C++D LGRAG +EA +++ +M D IWGSLL+AC+ HG++++A+ A
Sbjct: 395 GIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVA 454
Query: 413 AKQIIELDKNESCGYV-LMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
K ++ L+ N GYV +M+NLY +EEA R ++K K PG S IE+D EVH
Sbjct: 455 VKNLVALNPNNG-GYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVH 513
Query: 472 EFVAGGRLHPKAPEVYLLLNDL 493
+F + + HP+ E+Y++L+ L
Sbjct: 514 QFYSLDKSHPETEEIYMILDSL 535
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 294/495 (59%), Gaps = 7/495 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +K+IH I TGL + ++ G + A+ VF ++ P++ +N +I
Sbjct: 79 ISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLE-NGLVRLAHQVFEKMPSPDIVSFNVMIV 137
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV--VKQG 118
G+++ A+ LF +M V ++P T L + QLG + G +HG + K
Sbjct: 138 GYAKKGFGLEAMRLFHEM-VGLGLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPT 196
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ + + N ++ MY C + A F + E D+V+WN ++ G AK GE++++R F
Sbjct: 197 ISSNLILGNALLDMYVKCQKVELALRTFGAL-KEKDIVSWNMIVAGCAKVGELEQARLFF 255
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+M R+ VSWNS+++GY F EL +M + + P TM+SL++A + GA+
Sbjct: 256 YQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSAATESGALD 315
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
QG W H +++ +L+ + +A+IDMYCKCG ERA +VF + KK ++ W +M+ GLA
Sbjct: 316 QGRWAHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEINKKDVTVWTTMITGLA 375
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+GY ++A++LFS +Q ++ PD ++F++VL+AC+HSG V+Q F+ MT+ Y I+P +
Sbjct: 376 FHGYGSKALELFSEMQ-EDVSPDDVTFVSVLSACSHSGLVDQGIKVFSSMTD-YGIEPGV 433
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C+VD L R+G L EA+ +I MP P IWG++L+AC+ G++E+A+ A+++++
Sbjct: 434 EHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAMLNACQAQGDVELAEIASRELLN 493
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD E GY L+SN+YAAS ++ + + R M+ ++K GCS + VDG VH F++ +
Sbjct: 494 LDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGVKKTAGCSSVVVDGVVHNFISADK 553
Query: 479 LHPKAPEVYLLLNDL 493
HP ++ +LN L
Sbjct: 554 CHPGWVDISSILNCL 568
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 182/404 (45%), Gaps = 49/404 (12%)
Query: 24 SRILAF-CTSPAGDINYAYLVFTQIK-KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVT 81
SR + F S +++ A +F PNLFI+NT+I F SS + ++L++
Sbjct: 2 SRFIYFSAVSHPDNLDLAITLFNHFTPNPNLFIYNTLISAF--SSLKKIESFYLYNVLLS 59
Query: 82 SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSE 141
S P + T L +A + + Q+H + + GL ++ NT+I +Y G +
Sbjct: 60 SGECPDKQTLLYLLQAVNFISQVK---QIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRL 116
Query: 142 ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVK 201
A +F+++ + D+V++N MI+G AK G E+ RLF +MV
Sbjct: 117 AHQVFEKMPSP-DIVSFNVMIVGYAKKGFGLEAMRLFHEMVGL----------------- 158
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN--CFELNTIVV 259
++P EFT++ LL +C +LG ++ G+ +H ++ N I+
Sbjct: 159 --------------GLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILG 204
Query: 260 TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK 319
A++DMY KC E AL+ F + +K + WN +V G A G +A F +
Sbjct: 205 NALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCR--- 261
Query: 320 PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE--- 376
D +S+ +++T G K+ M K+ P +V A +G L++
Sbjct: 262 -DIVSWNSLVTGYACRGDFASVKELIVDMV-MEKVIPDTVTMISLVSAATESGALDQGRW 319
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
A + M DA + +L+ K G+IE A + K+I + D
Sbjct: 320 AHGWVIRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEINKKD 363
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 172/451 (38%), Positives = 266/451 (58%), Gaps = 39/451 (8%)
Query: 54 IWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR 113
+WNT+IRG+S+S PR AI+L++ M+ P T+P L + A+L G ++H
Sbjct: 1 MWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSH 60
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
++K G E D F+ N +I++Y+ +F G ++
Sbjct: 61 IIKHGFESDLFVRNALIHLYS----------VF----------------------GNLNL 88
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R LFD+ + R+ VS+N+MI GY + + AL LF EMQ + E T+V++L+ACA+
Sbjct: 89 ARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSD----EVTLVAVLSACAR 144
Query: 234 LGAIRQGEWI-HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK--KGLSCW 290
LGA G+ + H ++ F NTI+ A++DMY KCG + AL++F V K K +
Sbjct: 145 LGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVF 204
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
NSM+ GLA +G AI +F L S+ LKPD ++F+ VL AC HSG + + K F M
Sbjct: 205 NSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFN 264
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
Y IKP ++HY CMVD LGR G LEEA L++ MP + +++IW +LLSACR HGN+++ +
Sbjct: 265 AYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGE 324
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
A ++++E++ YVL+SN+ A + Q+EEA + R +M++ I K PG S IE+ G +
Sbjct: 325 IAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAI 384
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
H FVA + HP+ E+ L+L D+ + ++ G
Sbjct: 385 HRFVASDKSHPQGKEIELMLKDMAMRLKSAG 415
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 51/305 (16%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H+H+IK G D + ++ S G++N A +F + +L +NT+I+G+++
Sbjct: 56 EVHSHIIKHGFESDLFVRNALIHL-YSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEV 114
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ P +A+ LF +M + + T ++ A A+LG G +L+ + ++ G+ F
Sbjct: 115 NQPESALCLFGEMQNSDEV-----TLVAVLSACARLGAFDLGKRLYHQYIENGV----FN 165
Query: 126 HNTIIY-----MYANCGFLSEARLMFDEVDTEFDV-VAWNSMIIGLAKCGEIDESRRLFD 179
NTI+ MYA CG + A +F V +NSMI GLA+ G + E+
Sbjct: 166 QNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHG-LGET----- 219
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
A+ +FRE+ +KP E T V +L AC G I +
Sbjct: 220 -------------------------AITVFRELISTGLKPDEVTFVGVLCACGHSGLIEE 254
Query: 240 GEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCPERALQVFNTVPKKGLSC-WNSMVFG 296
G+ + + N + + + ++D+ + GC E A + +P + S W +++
Sbjct: 255 GKKLFESMF-NAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSA 313
Query: 297 LAMNG 301
+G
Sbjct: 314 CRTHG 318
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 288/492 (58%), Gaps = 2/492 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH K G + L + + + A +F ++ ++ W T++ G+++
Sbjct: 150 EAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYAR 209
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
P A +F M+V P +T + A Q+GL G +H VV+ G+
Sbjct: 210 GGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVN 269
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ M+ CG ++ A+ +FD + + DV +W SM+ AKCG+++ + +LF ++ +R
Sbjct: 270 LENALVDMFGKCGCVASAKEIFDGMPIK-DVYSWTSMVSAYAKCGDLENAGKLFKEIPNR 328
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSW+ M++ Y + +EA+ +F +M ++P + T+VS+L+ACA+LG + G ++
Sbjct: 329 NAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLY 388
Query: 245 N-FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
+ ++V++ EL + A IDM+ KCG A ++F + K + WN+M+ A++G
Sbjct: 389 DAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQS 448
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ LF ++ + PD I++I VL+AC+HSG V++ + +F M Y I+P +HY+C
Sbjct: 449 EEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYAC 508
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
M+D LG+ GLLEEA ++ RSMP D WG+LL+ACR HGN+E+ K AA +++ LD ++
Sbjct: 509 MIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLVGLDPSD 568
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S YVLMS +YA+ ++ + R +M++ ++K PGCS IEVDG+ HEF+A H +
Sbjct: 569 SGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKKNPGCSSIEVDGKFHEFLAADVSHAHS 628
Query: 484 PEVYLLLNDLGL 495
++Y L ++ L
Sbjct: 629 EDIYAALENIYL 640
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 197/430 (45%), Gaps = 69/430 (16%)
Query: 14 TGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKK-PNLFIWNTIIRGFSQSSTPRNA 71
+GLA ASR+LAFC S + +A V Q + PN ++ T++RGF ++ P +A
Sbjct: 57 SGLAAHRFPASRLLAFCALSDPPRLAHAAAVLAQCAEGPNAYMLATMMRGFLRAGKPAHA 116
Query: 72 ILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQFIHNTII 130
+ LF +L R +F A + +H K+G + + N ++
Sbjct: 117 LALFRRVLRDRLPADARTI---VFAVKAATTSSSPAEAIHCVAFKRGFIGQSVLVGNALV 173
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
+MYA+ L +AR +FDE+ + DVV+W +++ G A+ G DE+ R+F +MV W
Sbjct: 174 HMYASSMSLPDARKLFDEM-ADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGG-GW- 230
Query: 191 SMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN 250
P+E T+V+ +A ++G + G +H +V +
Sbjct: 231 ----------------------------PNEVTLVAAASAAGQIGLLGLGRMVHQCVVES 262
Query: 251 CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG-YEN----- 304
++ + A++DM+ KCGC A ++F+ +P K + W SMV A G EN
Sbjct: 263 GVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLF 322
Query: 305 -------------------------EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
EA+++F+ + ++ ++P + ++VL+AC G ++
Sbjct: 323 KEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLD 382
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ + ++K++ ++ + +D + G + A +L R+M D + + W +++ A
Sbjct: 383 VGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNM-EDKNVVSWNTMIVA 441
Query: 400 CRKHGNIEMA 409
HG E A
Sbjct: 442 HALHGQSEEA 451
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 295/529 (55%), Gaps = 32/529 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL---AFCTSP---------------------------A 34
KK+H+ ++K GL + ++ +L A C P
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQV 225
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A F Q+ + ++ WN++I G++Q A+ +F ML S + P R T S+
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASV 285
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT-EF 153
A A L G Q+H +V G + + N +I MY+ CG + AR + ++ T +
Sbjct: 286 LSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+ + +++ G K G+++E++ +FD + R+ V+W +MI GY ++ + EA+ LFR M
Sbjct: 346 KIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMV 405
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ +P+ +T+ ++L+ + L ++ G+ IH V + + V A+I MY K G
Sbjct: 406 GEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSIT 465
Query: 274 RALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
A + F+ + ++ W SM+ LA +G+ EA++LF + L+PD+I+++ V +AC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H+G VNQ + YF +M + KI P++ HY+CMVD GRAGLL+EA++ I MP +PD +
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
WGSLLSACR + NI++ K AA++++ L+ S Y ++NLY+A ++EEA + R MK+
Sbjct: 586 WGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKD 645
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+++KE G S IEV +VH F +HP+ E+Y+ + + I++MG
Sbjct: 646 GRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMG 694
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 200/409 (48%), Gaps = 37/409 (9%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD++ + F ++ + + W T+I G+ AI + +M+ I+P + T ++
Sbjct: 94 GDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMM-REGIEPSQFTLTNV 152
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
+ A G ++H +VK GL + + N+++ MYA CG A+++FD + + D
Sbjct: 153 LASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVK-D 211
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-Q 213
+ +WN+MI + G++D + F++M R+ V+WNSMISGY + AL++F +M +
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLR 271
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ + P FT+ S+L+ACA L + GE IH+ +VT F+++ IV+ A+I MY +CG E
Sbjct: 272 DSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 274 RALQ---------------------------------VFNTVPKKGLSCWNSMVFGLAMN 300
A + +F+++ + + W +M+ G +
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQH 391
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EAI LF + +P+ + A+L+ + + K ++ +I S+
Sbjct: 392 GLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIY-SVSV 450
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ ++ +AG + A + + + D + W S++ A +HG+ E A
Sbjct: 451 SNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 170/343 (49%), Gaps = 40/343 (11%)
Query: 104 ARDGAQL-HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
R AQL H RV+K GL F ++ N ++ +Y+ G+ AR +FDE+ +WN+++
Sbjct: 29 GRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR-TAFSWNTVL 87
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
AK G++D S FD++ R++VSW +MI GY ++ +A+ + EM + I+PS+F
Sbjct: 88 SAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQF 147
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T+ ++L + A + G+ +H+F+V N V ++++MY KCG P A VF+ +
Sbjct: 148 TLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRM 207
Query: 283 PKKGLS-------------------------------CWNSMVFGLAMNGYENEAIKLFS 311
K +S WNSM+ G GY+ A+ +FS
Sbjct: 208 VVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFS 267
Query: 312 G-LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT-LMTETYKIKPSIKHYSCMVDALG 369
L+ S L PD + +VL+AC + K+ + + ++T + I + + ++
Sbjct: 268 KMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIV--LNALISMYS 325
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWG--SLLSACRKHGNIEMAK 410
R G +E A +LI + D I G +LL K G++ AK
Sbjct: 326 RCGGVETARRLIEQRGT-KDLKIEGFTALLDGYIKLGDMNEAK 367
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 331 bits (849), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 281/483 (58%), Gaps = 32/483 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++ ++IHA IKTG+ + S L S G I+ VF + +L W T+I+
Sbjct: 126 IREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQ 185
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
F+++ A+ F++M ++ T + A + LG L
Sbjct: 186 AFTKAGLYSRAVEAFMEM-CDLRLRADGRTLVVVLSACSNLG---------------DLN 229
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
Q +H+ I + +D + DV N+++ KC +++ + ++FD+
Sbjct: 230 LGQKVHSYIRHY----------------IDMKADVFVGNALLDMYLKCDDLNSAYKVFDE 273
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +N V+WN+MISG +++EAL+ FR MQ++ +KP E T+V +LN+CA LG + G
Sbjct: 274 MPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIG 333
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+W+H ++ N + V A++DMY KCG + A +VF ++ ++ + + +M+FGLA++
Sbjct: 334 KWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALH 393
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G N A ++FS + ++P+ ++F+ +L AC+H G V + K YF M++ YK++P +H
Sbjct: 394 GEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEH 453
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CM+D LGRAGL++EAE++I M PD G+LL ACR HGN+++ + +++ ELD
Sbjct: 454 YGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELD 513
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+E Y+LM+NLY++ +++++A++ R MK K+ K PGCSLIEVDG VHEF G + H
Sbjct: 514 PDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSH 573
Query: 481 PKA 483
P++
Sbjct: 574 PRS 576
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 180/376 (47%), Gaps = 39/376 (10%)
Query: 52 LFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLH 111
L + N IIR S++S + + +MLV ++P T P + KA A + R+G Q+H
Sbjct: 75 LSLCNAIIRSISRNSINLSPMEFLNEMLVVG-LEPDGFTIPLVLKALALIQGIREGQQIH 133
Query: 112 GRVVKQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
R +K G+ F+ ++ NT++ +Y+ CG
Sbjct: 134 ARSIKTGMVGFNVYVSNTLMRLYS--------------------------------VCGS 161
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
I + +++FD+ R+ VSW ++I + + + A+E F EM + ++ T+V +L+A
Sbjct: 162 IHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSA 221
Query: 231 CAKLGAIRQGEWIHNFLVTNC-FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
C+ LG + G+ +H+++ + + V A++DMY KC A +VF+ +P K +
Sbjct: 222 CSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVT 281
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WN+M+ GLA G EA+ F +Q +KPD ++ + VL +C + G + K M
Sbjct: 282 WNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMR 341
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ + + ++D + G ++EA ++ SM D + +++ HG A
Sbjct: 342 RNHILADKFVG-NALLDMYAKCGSIDEAFRVFESMKRR-DVYSYTAMIFGLALHGEANWA 399
Query: 410 KQAAKQI--IELDKNE 423
Q ++ + ++ NE
Sbjct: 400 FQVFSEMFRVGIEPNE 415
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 167/505 (33%), Positives = 284/505 (56%), Gaps = 13/505 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++ LI G ++ A +++ FC D+ YA +F + PN+F++ +I
Sbjct: 56 LNHLKQLQGFLISHGHSQTQFFAFKLVRFCNLTLADLCYARYIFDNLTSPNVFLYTAMIT 115
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++ P+ A LL+ +M+ I+P YP + ++ + + +H +V+K G
Sbjct: 116 AYASYPDPKAAFLLYRNMVRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFG 175
Query: 121 FDQFIHNTIIYMYAN-CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ I+ Y+ + AR MFDE+ E VV+W +MI G A+ G D + LF+
Sbjct: 176 GYPVVQTAIVDSYSRFSSDIGSARQMFDEM-LERTVVSWTAMISGYARLGNFDSAIELFE 234
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREM---------QEQNIKPSEFTMVSLLNA 230
M R+ +WN++I+G +N F EA+ LF+ M ++ KP++ T+ S L+A
Sbjct: 235 SMPERDVPAWNALIAGCAQNGFFCEAIWLFKRMVLLALEGNNNDRENKPNKTTLGSALSA 294
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
C G + G+WIH ++ ++ + A++DMY KCG + A +VF+ + K L+ W
Sbjct: 295 CGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSW 354
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQ--SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
NS++ LA++G+ AI LF+ L +KP+ ++F+ VL AC H G V + YF +M
Sbjct: 355 NSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMM 414
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
Y I+P I+H+ C++D LGRAG EEA +++R M +PD ++WGSLL+AC+ HG ++
Sbjct: 415 RRDYDIEPQIEHFGCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDL 474
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
A+ + K++IE+D ++++N+YA +++E + R L+KE K PGCS IEVD
Sbjct: 475 AEYSVKKLIEMDPKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDN 534
Query: 469 EVHEFVAGGRLHPKAPEVYLLLNDL 493
+V++F + HP E+Y L +
Sbjct: 535 QVYQFYSFDMSHPSVEEIYKTLESM 559
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 175/485 (36%), Positives = 277/485 (57%), Gaps = 43/485 (8%)
Query: 9 AHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTP 68
AH + G + + + L + G I A +F +I ++ WN II G++ +
Sbjct: 157 AHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNN 216
Query: 69 RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNT 128
+ A+ LF +M+ T+ ++P T ++ A AQ G + G Q+H + GL + I N
Sbjct: 217 KEALDLFKEMMKTN-VKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNA 275
Query: 129 IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS 188
+I +Y+ KCGE++ + LF + +++ +S
Sbjct: 276 LIDLYS--------------------------------KCGEVETACGLFQGLSNKDVIS 303
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL- 247
WN+MI GY +KEAL LF+EM P++ TM+S+L ACA+LGAI G WIH ++
Sbjct: 304 WNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYID 363
Query: 248 -----VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
VTN L T ++IDMY KCG E A QVFN++ + LS N+M+FG AM+G
Sbjct: 364 KRIKGVTNASSLRT----SLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGR 419
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
N A +FS ++ + ++PD I+F+ +L+AC+HSG ++ + F MT+ YKI P ++HY
Sbjct: 420 ANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYG 479
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CM+D LG GL +EAE++I +M +PD +IW SLL AC+ HGN+E+ + A+++I+++
Sbjct: 480 CMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPE 539
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
YVL+SN+YA + ++ E R L+ + ++K PGCS IE+D VHEF+ G + HP+
Sbjct: 540 NPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPR 599
Query: 483 APEVY 487
E+Y
Sbjct: 600 NREIY 604
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 121/254 (47%), Gaps = 33/254 (12%)
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+ + N + WN+M G+ + A++L+ M + P+ +T LL +CAKL
Sbjct: 59 VFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKV 118
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC--------------------------- 269
++G+ IH ++ +EL+ V T++I MY K
Sbjct: 119 SKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITG 178
Query: 270 ----GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
G E A ++F+ +P K + WN+++ G A G EA+ LF + +N+KPD +
Sbjct: 179 YASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTM 238
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ V++AC SG + + + + + + + ++K + ++D + G +E A L + +
Sbjct: 239 VTVVSACAQSGSIQLGRQVHSWI-DDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGL- 296
Query: 386 SDPDAIIWGSLLSA 399
S+ D I W +++
Sbjct: 297 SNKDVISWNTMIGG 310
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 284/488 (58%), Gaps = 3/488 (0%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IH K G DP + ++A S I A L+F ++ P+ WN II G+ Q+
Sbjct: 142 EIHGLASKLGFVDDPFIQTGLIAMYAS-CRRIMDARLLFDKMCHPDAVAWNMIIDGYCQN 200
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+A+ LF DM +S ++P + ++ A G G +H V G D +
Sbjct: 201 GHYDDALRLFEDMR-SSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHL 259
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+I MYANCG + AR ++D + ++ +V+ +M+ G AK G + ++R +FD+M+ R+
Sbjct: 260 QTALINMYANCGAMDLARKIYDGLSSKHLIVS-TAMLSGYAKLGMVKDARFIFDQMIERD 318
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
V W++MISGY + + +EAL+LF EM ++ P + TM+S+++AC+ +GA+ Q WIH
Sbjct: 319 LVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHT 378
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + F V A+IDMY KCG +A +VF +P+K + W+SM+ AM+G +
Sbjct: 379 YVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADS 438
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AIKLF ++ N++P+ ++FI VL AC H+G V + + F+ M + I P+ +HY CMV
Sbjct: 439 AIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMV 498
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D RA L +A +LI +MP P+ IIWGSL+SAC+ HG E+ + AAK+++EL+ +
Sbjct: 499 DLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDG 558
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
V++SN+YA ++ + R M I KE S IE++ +VH F+ R H ++ E
Sbjct: 559 ALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDE 618
Query: 486 VYLLLNDL 493
+Y L+++
Sbjct: 619 IYEKLDEV 626
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 202/427 (47%), Gaps = 66/427 (15%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
VF+QI P+ N ++R S+SS P I L+ ++ + R ++PSL KA +++
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
G ++HG K G D FI +I MYA+C + +ARL+FD++ D VAWN +I
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKM-CHPDAVAWNMII 194
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G + G D++ RLF+ +M+ ++KP
Sbjct: 195 DGYCQNGHYDDALRLFE-------------------------------DMRSSDMKPDSV 223
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQ----- 277
+ ++L+AC G + G IH F+ N + +++ + TA+I+MY CG + A +
Sbjct: 224 ILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGL 283
Query: 278 --------------------------VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
+F+ + ++ L CW++M+ G A + EA+KLF
Sbjct: 284 SSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFD 343
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA 371
+ PD I+ ++V++AC+H G + QA ++ + ++ + ++D +
Sbjct: 344 EMLQKRSVPDQITMLSVISACSHVGALAQA-NWIHTYVDRSGFGRALSVNNALIDMYAKC 402
Query: 372 GLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMS 431
G L +A ++ +MP + I W S+++A HGN + A + +++ E++ E G +
Sbjct: 403 GNLVKAREVFENMPR-KNVISWSSMINAFAMHGNADSAIKLFRRMKEVNI-EPNGVTFIG 460
Query: 432 NLYAASY 438
LYA +
Sbjct: 461 VLYACGH 467
>gi|51535410|dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125596587|gb|EAZ36367.1| hypothetical protein OsJ_20695 [Oryza sativa Japonica Group]
gi|218197849|gb|EEC80276.1| hypothetical protein OsI_22264 [Oryza sativa Indica Group]
Length = 517
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 176/498 (35%), Positives = 278/498 (55%), Gaps = 35/498 (7%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASR--ILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+ +++IH HL+ G+A + R +L+ + G + YA VF I +P+LF+ N ++
Sbjct: 12 RAVRQIHGHLVVGGIAAARLQHLRELLLSCVATFRGRMGYARKVFDGIPRPDLFMHNAMV 71
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG++ + P +A ++ M S ++P T+ L +A A L +R G Q+HG VVK G
Sbjct: 72 RGYAHAGAPGDAFAVYRRMTEASRLRPDAFTFCYLLRACAGLPGSRAGRQVHGAVVKLGF 131
Query: 120 EFDQFIHNTIIYMYANCGFL-------------------------------SEARLMFDE 148
D ++ N +I M+A CG L + AR MFDE
Sbjct: 132 LKDAYVRNALINMFAKCGDLRVASVLLDEAGEGDVVAWSAVIAGHAARGDMAAARKMFDE 191
Query: 149 VDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
T D+V WN M+ AK GE++ +R LFD+ ++ VSWN++I+GY K ALE+
Sbjct: 192 C-THKDIVCWNVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGYAAQGMLKHALEV 250
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV-TAIIDMYC 267
F EM+ P E T+VSLL+ CA G + G IH+ L +IVV A++ MY
Sbjct: 251 FDEMRAAGWTPDEATIVSLLSCCANTGLLDAGRMIHHQLHLERRPWISIVVGNALVSMYA 310
Query: 268 KCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIA 327
KCG A++ FNT+ + WNS++ GLA +G ++++ F + + P+ ISF+
Sbjct: 311 KCGDLHTAVEGFNTMKDTDVWTWNSVIGGLAFHGQAEQSVRFFKKMLEKRIHPNEISFLC 370
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
VL AC+H+G V + +F LM + Y I+P+ +HYSC+VD LGRAGLL+EA ++ +M +
Sbjct: 371 VLGACSHAGLVEDGQKFFYLMKDRYGIEPNARHYSCIVDMLGRAGLLDEAYAIVSNMRCE 430
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEER 447
P A++W +LL ACR HGN+ + K ++++ ++++ S YVL+S +YA+S ++ ER
Sbjct: 431 PSAVVWRTLLGACRTHGNMTLGKLVREKLLNMNEDASADYVLLSGIYASSGEWLGVETER 490
Query: 448 LLMKEVKIEKEPGCSLIE 465
M I K G + I+
Sbjct: 491 RSMDRRGIRKAAGYAQID 508
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 172/481 (35%), Positives = 270/481 (56%), Gaps = 35/481 (7%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IHAH IKTGL+ + + ++ F + +G I VF Q +L W T+I+ +S+
Sbjct: 159 QIHAHSIKTGLSSNLFVKNTLMRF-YAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKM 217
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
P AI F M T+ R+T + A +QLG G ++
Sbjct: 218 GYPSEAIAAFFRMNCTA----DRMTLVVVLSACSQLGDFTLGKKI--------------- 258
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ YM + D DV N+++ KCG+ +R+LF M +N
Sbjct: 259 ---LAYMDHHL------------FDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKN 303
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSWNSMISG FKEAL +FR MQ +KP T+V +LN+CA LG + G+W+H+
Sbjct: 304 LVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHS 363
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ N + + V A++DMY KCG ++A VF + K + + +M+ G AM+G +
Sbjct: 364 YIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADR 423
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+ +FS + ++PD+++ + VL+AC+H+G + + + +F M+ Y ++P +HY CMV
Sbjct: 424 ALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMV 483
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAGL+ EAE MP PDA +WGSLL AC+ H +E+ + +++IE++
Sbjct: 484 DLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDG 543
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
Y+LMSN+Y+++ ++ +A++ R MK+ I+K PGCS IEVDG VHEF G + HPK+ E
Sbjct: 544 AYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRKGEKSHPKSRE 603
Query: 486 V 486
+
Sbjct: 604 M 604
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 290/504 (57%), Gaps = 35/504 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAY-LVFT--QIKKPNLFIWNT 57
+ L ++H H+IK G +P+ ++ + +S I YA LVF+ + + F+++T
Sbjct: 20 LPKLAQLHTHIIKLGFQNNPLVLTKFTS-ASSNLDAIPYAMSLVFSVEDARVYDAFLFST 78
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
IIR +++SS ++ + + ++++ I P + +P + KA A L G +HG +VK
Sbjct: 79 IIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKF 138
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G + D F+ NT+++MY C G ++ +R+L
Sbjct: 139 GFDDDIFVQNTMVHMYCCCS-------------------------------GGMEFARKL 167
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD+M + V+W +MI GY R + A+ LFR+MQ + P + TMVS+L+AC LGA+
Sbjct: 168 FDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGAL 227
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G+WI +++ + A++DM+ KCG ++AL +F + K+ + W S++ GL
Sbjct: 228 ELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGL 287
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AM+G EA+ LF +++S + P+ I+FI +L+AC+HSG V + + YF+ MT + I P
Sbjct: 288 AMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPK 347
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY CMVD L RAGL+ EA + + MP +P+ IIW +L+SACR HG +++ + +KQ+I
Sbjct: 348 IEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLI 407
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+ YVL+SN+Y +E+ + R+ M + I+K PG ++IE+D E+HEF+ G
Sbjct: 408 RNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGD 467
Query: 478 RLHPKAPEVYLLLNDLGLLIQEMG 501
R H + E+ ++N++G ++ G
Sbjct: 468 RSHNQYNEIIKMVNEMGREMKRAG 491
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 167/459 (36%), Positives = 267/459 (58%), Gaps = 43/459 (9%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G I A+ +F +I ++ WN I G++++ + A+ LF M+ T+ ++P T ++
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTN-VRPDESTMVTV 241
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A AQ G G Q+H + G + I N +I +Y+
Sbjct: 242 LSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYS-------------------- 281
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
KCGE++ + LF + +++ +SWN++I GY +KEAL LF++M
Sbjct: 282 ------------KCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLR 329
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL------VTNCFELNTIVVTAIIDMYCK 268
KP++ TM+S+L+ACA LGAI G WIH ++ VTN L T ++IDMY K
Sbjct: 330 SGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT----SLIDMYAK 385
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG E A QVF+++ + LS WN+M+FG AM+G N A +FS ++ + ++PD I+F+ +
Sbjct: 386 CGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGL 445
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC+HSG ++ + F MT YK+ P ++HY CM+D G +GL +EAEK+I +M +P
Sbjct: 446 LSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEP 505
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D +IW SLL AC+ HGN+E+ + A+ +I+++ YVL+SN+YA + ++ E + R
Sbjct: 506 DGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRA 565
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
L+ + ++K PGCS IE+D VHEF+ G + HP+ E+Y
Sbjct: 566 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 33/254 (12%)
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD + + WN+M G+ + AL+L+ M + P+ +T LL +CAK A
Sbjct: 59 VFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXA 118
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV------------------ 278
++G+ +H ++ F+L+ + T++I MY + G E A +V
Sbjct: 119 FKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITG 178
Query: 279 -------------FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
F+ +P K + WN+ + G A G EA++LF + +N++PD +
Sbjct: 179 YASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTM 238
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ VL+AC SG + + + + + + ++K + ++D + G LE A L + +
Sbjct: 239 VTVLSACAQSGSIELGRQVHSWIND-HGFGXNLKIVNALIDLYSKCGELETACGLFQGL- 296
Query: 386 SDPDAIIWGSLLSA 399
S+ D I W +L+
Sbjct: 297 SNKDVISWNTLIGG 310
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 182/499 (36%), Positives = 274/499 (54%), Gaps = 40/499 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT----SPAGDINYAYLVFTQIKKPNLFIW- 55
++ L ++HA +K+GL P +R+L CT +PA + YA VF +I P +W
Sbjct: 32 LRALAQLHAAAVKSGLGAHPALVTRLLTLCTKQGAAPA-HLAYARQVFDRIPTPGDVVWY 90
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
NT++RG+++SS + ++ + P T+ SL KA A +G Q HG V
Sbjct: 91 NTLLRGYARSSDGAAEAARVLARMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAV 150
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G +++ T+I MYA CG +AR +R
Sbjct: 151 KTGAADHEYVLPTLINMYAECG---DAR-----------------------------SAR 178
Query: 176 RLFDKMVSRN-TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
+F ++ + + VS+N+MI+ VR+ + EAL LFREMQ + +KP+ T+ S+L+ACA L
Sbjct: 179 AMFGRVPNGDCVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKPTSVTVTSVLSACALL 238
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA+ G WIH ++ + V TA+IDMY KCG E A+ VF + + W+ M+
Sbjct: 239 GALELGRWIHEYVRKAGLDSLVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSVMI 298
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
A + Y EAI LF ++ ++PD ++F+ VL AC+HSG V++ YF M E Y I
Sbjct: 299 VAYANHSYGREAISLFEEMKKQGIRPDAVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGI 357
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P IKHY C+ D L R+G LE+A K I +P P AI+W +LLSAC HG +++ K+ +
Sbjct: 358 VPGIKHYGCVTDLLARSGQLEKAYKFIDELPIQPTAILWRTLLSACGSHGAVDLGKRVFE 417
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+I+ELD YV+ SNL A + ++EE R LM E + K PGCS IE+D VHEF
Sbjct: 418 RILELDDTHGSDYVIFSNLCANTGKWEEMNRVRKLMNEKGVVKVPGCSSIEIDNRVHEFF 477
Query: 475 AGGRLHPKAPEVYLLLNDL 493
AG HP++ + +++ +
Sbjct: 478 AGDGRHPQSQDARRMVDQV 496
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 280/486 (57%), Gaps = 3/486 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K+ +++HA +++TG A + +L F + G + VF ++++P L +W IIR
Sbjct: 107 VKEGEEVHASVVRTGFACSEFVSGALLGFYVA-CGLVGKGRQVFDEMRQPGLVLWTLIIR 165
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ + P A+ LF M + P + ++ A LG +H + K G+E
Sbjct: 166 AYVCVTFPEKALELFRTMREVG-LTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIE 224
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ +T+I Y CG L A F E + ++V WN+MI + ++ ++LF
Sbjct: 225 VDAFVSSTLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQS 283
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VSWNSMI G+ R +++EAL F EM+ + P+ T++S L+ACA GA+ G
Sbjct: 284 MPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTG 343
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
WIH ++ N + + +++IDMY KCG ++A+Q+F ++ L W S+V GLAM+
Sbjct: 344 AWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMH 403
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G +A+ FS ++ + ++PD ++ + VL+AC H+G ++Q YF M + + + P ++H
Sbjct: 404 GRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEH 463
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y MVD LGR G L+EA LI MP + + IIWG+ LSACR H N+E+ + AA++++ L
Sbjct: 464 YGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLX 523
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ V++SN+YA +++ +M R +K+ ++K PGCS IEV+G VH F+ G H
Sbjct: 524 PRDPWARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSH 583
Query: 481 PKAPEV 486
P E+
Sbjct: 584 PCYTEI 589
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 178/438 (40%), Gaps = 89/438 (20%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +IH + I T +DP AASR+ N+F+WNT+IR
Sbjct: 29 LPRIHGNTIAT--VEDPSAASRL---------------------DCANVFVWNTMIRKQV 65
Query: 64 QSS-TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++ R+ LL+ + + ++P T+ L KA ++G ++H VV+ G
Sbjct: 66 ENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACS 125
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+F+ ++ Y CG + + R +FDE M
Sbjct: 126 EFVSGALLGFYVACGLVGKGRQVFDE--------------------------------MR 153
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
V W +I YV ++ALELFR M+E + P + ++++AC LG + +
Sbjct: 154 QPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKA 213
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL-------------------------- 276
+H F+ + E++ V + +I Y +CG + A
Sbjct: 214 MHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNN 273
Query: 277 -----QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
Q+F ++P + + WNSM+ G A G EA+ F ++ S + P+ ++ ++ L+A
Sbjct: 274 LELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSA 333
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C G ++ + + + S ++D + G +++A ++ + D
Sbjct: 334 CASHGALDTGA-WIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE-STRRDLF 391
Query: 392 IWGSLLSACRKHGNIEMA 409
W S++ HG E A
Sbjct: 392 TWTSIVCGLAMHGRGEKA 409
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 7/262 (2%)
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQ--EQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
N WN+MI V N L MQ ++P+ T + LL A +++GE
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H +V F + V A++ Y CG + QVF+ + + GL W ++ +
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+A++LF ++ L PD ++ V++AC G + AK + E I+ S
Sbjct: 173 PEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFI-EKSGIEVDAFVSS 231
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
++ G G L+ A + + P + ++W +++ +H N+E+ KQ + + + D
Sbjct: 232 TLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGKQLFQSMPDRD-- 288
Query: 423 ESCGYVLMSNLYAASYQFEEAM 444
+ M +A Q++EA+
Sbjct: 289 -VVSWNSMIGGFARIGQYQEAL 309
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 288/490 (58%), Gaps = 6/490 (1%)
Query: 17 AKDPIAASRILAFCTSPAGDINYAYL-----VFTQIKKPNLFIWNTIIRGFSQSSTPRNA 71
A D I A + + T G + + L + Q + N+ W ++I G+S++ P +A
Sbjct: 162 AFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADA 221
Query: 72 ILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIY 131
+ F ML + + P + A ++L G LH V ++ + + +I
Sbjct: 222 VYCFNCML-SDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALID 280
Query: 132 MYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNS 191
MYA CG +++A+ +FD V WN++I G K G +D +R LFD+M +R+ +++NS
Sbjct: 281 MYAKCGDIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNS 340
Query: 192 MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
MI+GY+ + + ++AL+LF +M+ ++ FT+VSLL ACA LGA+ G +H +
Sbjct: 341 MITGYIHSGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRI 400
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
E + + TA++DMY KCG + A VF+ + ++ + W +M+ GLA NG +A++ F
Sbjct: 401 VEEDVYLGTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFC 460
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA 371
++ +P +++IAVLTAC+HS +++ + +F M +K+ P ++HY CM+D L R+
Sbjct: 461 QMKRDGFQPTSVTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARS 520
Query: 372 GLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMS 431
GLL+EA L+++MP P+A+IWGS+LSACR H NI++A+ AA+ +++L E YV +
Sbjct: 521 GLLDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLY 580
Query: 432 NLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLN 491
N+Y S Q+ +A R+LM+E ++K G S I V G+VH+FVA + HP E+ ++
Sbjct: 581 NIYIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMME 640
Query: 492 DLGLLIQEMG 501
++ ++ +G
Sbjct: 641 EIACRLKSVG 650
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 210/460 (45%), Gaps = 44/460 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT---SPAGDINYAYLVFTQIKKPNLFIWNT 57
++ ++HA L +G +A +L+ T S + Y +F ++ F+++T
Sbjct: 12 VRQASQLHALLTTSGRIAHRPSAEHLLSSLTNTISAPRHLRYVLSLFDRLPHSTTFLFDT 71
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA--QLHGRVV 115
+R Q+S + +L + + + ++ T+ +F+ A AR G LH +
Sbjct: 72 ALRACLQASAGADHPVLLLRRMRSGGVRTGAFTFHFVFRCCAAGARARAGLCLMLHAACL 131
Query: 116 KQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
+ L + N +I+MYA+ G +AR FDE+ + D V W ++I GL + G +DE+
Sbjct: 132 RTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAK-DAVVWATVIGGLVRWGLLDEA 190
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
RRL + RN VSW S+I+GY R + +A+ F M + P E ++ L+AC+KL
Sbjct: 191 RRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKL 250
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK---------- 284
+ G +H + + +V A+IDMY KCG +A VF+ V +
Sbjct: 251 KNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNAI 310
Query: 285 ----------------------KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
+ + +NSM+ G +G +A++LF ++ ++ D
Sbjct: 311 IDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADN 370
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
+ +++LTAC G + + + E ++ + + ++D + G ++EA +
Sbjct: 371 FTVVSLLTACASLGALPHGRALHASI-EQRIVEEDVYLGTALLDMYMKCGRVDEATAVFH 429
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
M + D W ++++ +G M K A + ++ ++
Sbjct: 430 RM-GERDVHTWTAMIAGLAFNG---MGKDALESFCQMKRD 465
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 299/488 (61%), Gaps = 5/488 (1%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H+ + K G D + ++ G + +A +F + ++ W T+I G+++++
Sbjct: 174 VHSVIWKRGFDSDLFVQNGLIQNYVE-TGCLGFARQMFDESSVKDVVTWTTMINGYARNN 232
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
AI LF ML +S ++P +T +L A +Q G + G LH + ++ + +
Sbjct: 233 WLDEAIALFNSML-SSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLL 291
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N ++ MY CG L+ AR +F+ ++ DV +W S++ G AK G++ +R+LFD+M RN
Sbjct: 292 NAMLDMYVKCGCLTTAREIFNNMERR-DVFSWTSLLNGYAKNGDLGSARKLFDEMPERNI 350
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQGEWIH- 244
VSWN+MI+GY +N + EALELF M + + P+E T+V +L+A +LG + G+ IH
Sbjct: 351 VSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHC 410
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
N + +++ I+ A++DMY KCG + A ++F+++P+K L WNSM+ A G+
Sbjct: 411 NHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAK 470
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A+ LF + S LKPD+I+FI VL+AC++ G V++ + +F M + ++P +HY+CM
Sbjct: 471 KALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACM 530
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD L R GLL+EA +LI MP + WG+LL ACRKHGN+EMAK A ++++ELD +S
Sbjct: 531 VDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDS 590
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
Y L++N+ A ++++ R +M+E ++K PG SLIE++G+ HEF+ H ++
Sbjct: 591 GIYSLLANICADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIEGKFHEFLVADTSHTRSS 650
Query: 485 EVYLLLND 492
E+Y ++N+
Sbjct: 651 EIYRVVNE 658
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 212/454 (46%), Gaps = 75/454 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+I AH+ TGL ASR+LAFC S +GDI+YA+L+F Q + PN F WNT+I
Sbjct: 65 MFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCFFWNTMI 124
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+G+ +++ P F M + + + ++ KA Q G +H + K+G
Sbjct: 125 KGYCKANHPSMGFSFFRQM-IRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVIWKRGF 183
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D F+ N +I Y G L AR MFDE + DVV W +MI G A+ +DE+ LF+
Sbjct: 184 DSDLFVQNGLIQNYVETGCLGFARQMFDESSVK-DVVTWTTMINGYARNNWLDEAIALFN 242
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M+S ++KP+E TM++LL+AC++ G
Sbjct: 243 SMLS-------------------------------SDVKPNEVTMIALLSACSQKGDSEM 271
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ +H + + ++ A++DMY KCGC A ++FN + ++ + W S++ G A
Sbjct: 272 GKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAK 331
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG A KLF + N+ +S+ A++ + + + +A + F M + + P+
Sbjct: 332 NGDLGSARKLFDEMPERNI----VSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTED 387
Query: 360 HYSCMVDALGRAGLLE------------------------------------EAEKLIRS 383
C++ A G+ G LE A KL S
Sbjct: 388 TLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHS 447
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
MP + + + W S++SA +G+ + A Q+I
Sbjct: 448 MP-EKNLVSWNSMISAYASYGHAKKALTLFDQMI 480
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 130/282 (46%), Gaps = 5/282 (1%)
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFT 223
L+ G+I + +FD+ N WN+MI GY + FR+M + +
Sbjct: 95 ALSDSGDIHYAHLIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGS 154
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
V L AC + G +H+ + F+ + V +I Y + GC A Q+F+
Sbjct: 155 FVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESS 214
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
K + W +M+ G A N + +EAI LF+ + SS++KP+ ++ IA+L+AC+ G K
Sbjct: 215 VKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKT 274
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
+ I S+ + M+D + G L A ++ +M D W SLL+ K+
Sbjct: 275 LHEHIRRK-DITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERR-DVFSWTSLLNGYAKN 332
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
G++ A+ K E+ + + M Y+ + Q EA+E
Sbjct: 333 GDLGSAR---KLFDEMPERNIVSWNAMIAGYSQNSQPMEALE 371
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/495 (33%), Positives = 278/495 (56%), Gaps = 34/495 (6%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+HAHL+ + + + I+ + G ++ A +F ++ ++ W +I GFSQ++
Sbjct: 109 VHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNN 168
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
PR+A+LLF ML QP T SL KA G QLH +K G + ++
Sbjct: 169 RPRDALLLFPQMLRLG-FQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVG 227
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+ ++ MYA +CG +D ++ FD M +++
Sbjct: 228 SALVDMYA--------------------------------RCGHMDAAQLAFDGMPTKSE 255
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSWN++ISG+ R + + AL L +MQ +N +P+ FT S+L+ACA +GA+ QG+W+H
Sbjct: 256 VSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAH 315
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
++ + +L + ++DMY K G + A +VF+ + K + WN+M+ G A +G E
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKET 375
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+ F + ++P+ ISF+ VLTAC+HSG +++ YF LM + YK++P + HY VD
Sbjct: 376 LDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVD 434
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR GLL+ AE+ IR MP +P A +WG+LL ACR H N+E+ AA++ ELD ++S
Sbjct: 435 LLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGP 494
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
+L+SN+YA++ ++ + + R +MKE ++K+P CS +E++ VH FVA HP+ E+
Sbjct: 495 RMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEI 554
Query: 487 YLLLNDLGLLIQEMG 501
++ I+E+G
Sbjct: 555 RGKWEEISGKIKEIG 569
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +HAH+IK+GL + +L + AG I+ A VF ++ KP++ WNT++ G +Q
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMY-AKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ + F ML I+P +++ + A + GL +G + K +E D
Sbjct: 369 HGLGKETLDRFEQMLRIG-IEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVP 427
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ T + + G L A E+ E W +++
Sbjct: 428 HYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 288/490 (58%), Gaps = 9/490 (1%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H IK G+ + ++A G I+ A +F I L WN++I G++
Sbjct: 110 VHGLAIKLGIGSLVFVQNALIAVYVV-CGLIHCARKLFDDITDKTLVSWNSMIGGYAHMG 168
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD---GAQLHGRVVKQGLEFDQ 123
+ A LLF M ++P T+ +L +Q +RD G +H + G++ D
Sbjct: 169 NWKEAFLLFRKMR-EWGMEPDGFTFVNLLSVCSQ---SRDLDLGRYVHFCIEITGVKIDI 224
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ N ++ MYA CG L A+ +FD E +VV+W SMI A+ G I+ +R++FD+M
Sbjct: 225 IVRNALVDMYAKCGNLHSAQAIFDRTQ-EKNVVSWTSMISAYAQHGSIEVARQIFDQMPG 283
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+N VSWNSMIS Y+R +++EAL+LF +M+ + P E T+VS+L AC++LG + G+ I
Sbjct: 284 KNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKI 343
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
HN++++N + ++IDMY KCG AL +F +P K L WN ++ LA++G
Sbjct: 344 HNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCG 403
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EAIKLF +Q+ PD I+ +L+AC+HSG V+ YF M Y++ I+HY+C
Sbjct: 404 LEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYAC 463
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGR GLL EA +LI MP PD ++WG+LL ACR HGN+E+ KQ KQ++EL+ +
Sbjct: 464 MVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHS 523
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
YVL+SN+Y + ++E+ + R LM + I+K S IE+DG ++EF+ + H +
Sbjct: 524 GGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSIEIDGCIYEFMVDDKRHKIS 583
Query: 484 PEVYLLLNDL 493
+Y +L+ L
Sbjct: 584 SSIYAMLDQL 593
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 216/474 (45%), Gaps = 98/474 (20%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ LK +HA +I GL + + ++++FC AGD+ YA +F QI +PN F++N++I
Sbjct: 1 MRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S S P +A+LLF M + S + P T P + KA + +HG +K G+
Sbjct: 61 RGYSNSDDPIDAVLLFRRM-ICSGLSPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGI 119
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
F+ N +I +Y CG + AR +FD++ T+ +V+WNSMI G A G
Sbjct: 120 GSLVFVQNALIAVYVVCGLIHCARKLFDDI-TDKTLVSWNSMIGGYAHMG---------- 168
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+KEA LFR+M+E ++P FT V+LL+ C++ +
Sbjct: 169 ---------------------NWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDL 207
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKC------------------------------ 269
G ++H + +++ IV A++DMY KC
Sbjct: 208 GRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQ 267
Query: 270 -GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G E A Q+F+ +P K + WNSM+ G EA+ LF+ +++S + PD + +++
Sbjct: 268 HGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSI 327
Query: 329 LTACNHSGKVNQAKD----------------YFTLMTETYKIKPSIK------------- 359
L AC+ G + K Y +L+ K P +
Sbjct: 328 LAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNL 387
Query: 360 -HYSCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIEMA 409
++ ++ AL G EA KL M +D PD I LLSAC G ++M
Sbjct: 388 VSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMG 441
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 152/319 (47%), Gaps = 17/319 (5%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G++ ++R+FD++ N +NS+I GY + +A+ LFR M + P+EFT+ +L
Sbjct: 36 GDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVL 95
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
AC A + +H + V A+I +Y CG A ++F+ + K L
Sbjct: 96 KACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLV 155
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WNSM+ G A G EA LF ++ ++PD +F+ +L+ C+ S ++ + Y
Sbjct: 156 SWNSMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGR-YVHFC 214
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
E +K I + +VD + G L A+ I + + + W S++SA +HG+IE+
Sbjct: 215 IEITGVKIDIIVRNALVDMYAKCGNLHSAQA-IFDRTQEKNVVSWTSMISAYAQHGSIEV 273
Query: 409 AKQ-----AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPG--C 461
A+Q K ++ + SC Y Q+ EA++ M+ ++ +
Sbjct: 274 ARQIFDQMPGKNVVSWNSMISC--------YLREGQYREALDLFNKMRNSRVVPDEATLV 325
Query: 462 SLIEVDGEVHEFVAGGRLH 480
S++ ++ + V G ++H
Sbjct: 326 SILAACSQLGDLVMGKKIH 344
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 287/501 (57%), Gaps = 11/501 (2%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
L++ H+ LI+ G+A A R+L+F P YA + P+ ++N +
Sbjct: 21 LRQHHSQLIRLGVASHAAHARRLLSFLARDPDSHFPYASRLLAHHPDPHPALFNPLF--- 77
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
S+ P + ++++ P++P T+P + + L L AQLH ++K G
Sbjct: 78 --SALPTRHAARLLALMLSLPLRPDHFTFPQILPSAQPLHLV---AQLHALLLKLGFHAH 132
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
N ++ Y A +F DVV+W +M+ GL K G D++R LFD M
Sbjct: 133 TQSLNALLAAYLANARPDLASRVFRGGGGALDVVSWTTMVGGLLKLGLFDDARVLFDGMP 192
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
RN VSWN+M+SGYV+ +F +ALE+F EM+ + + + F + + AC GA+ +G
Sbjct: 193 ERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGRE 252
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGLAMN 300
+H ++ + +++ + TA++DMYCKCGC E A +VF +P KGL+ WN M+ G A++
Sbjct: 253 VHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVH 312
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G +A+KLF ++ + PD ++ + VLTAC H+G +++ + YF + + Y I+P ++H
Sbjct: 313 GRGQDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEH 372
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD GRAG LEEA+K+I+ MP +PD + G+L A + HG++++ + ++IELD
Sbjct: 373 YGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELD 432
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
S YVL++NL A + ++E+ R LM E + KE G S+IEV GEV EF GG H
Sbjct: 433 PQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCH 492
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+A EVY + +D+ I+ G
Sbjct: 493 PRAEEVYAMASDMMRKIRAEG 513
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/502 (33%), Positives = 292/502 (58%), Gaps = 34/502 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K L++IHA +I TGL + +++L+F + A I+Y +F I KP+ F+++++I
Sbjct: 32 LKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLIT 91
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S+ S P+ ++L + ML+ + I T+ ++ K+ A L G +H V G
Sbjct: 92 LTSKFSFPQESLLCYRRMLLAN-ISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYG 150
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ ++ YA K G + +R++FDK
Sbjct: 151 LDAYVQAALVSFYA--------------------------------KSGHVMIARKVFDK 178
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M + V+WNSMISGY +N KEA+ELF MQ+ +KP T VSLL+ACA++GAI G
Sbjct: 179 MPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLG 238
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
W+H ++ NCF+LN ++ TA+++MY +CG +A +VF+++ +K + W +M+ G M+
Sbjct: 239 FWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMH 298
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ ++AI+LF+ + +P+ ++F+AVL+AC H+G V++ + FT M + Y + PS++H
Sbjct: 299 GHGSQAIELFNEMSFDGPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEH 358
Query: 361 YSCMVDALGRAGLLEEAEKLIR-SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
CMVD LGRAG L EA + I+ + P +P +W ++L AC+ H N ++ + A+ ++ +
Sbjct: 359 QVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSI 418
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ YV++SN+YA + + + + R +M +++KE G S I+VD +V+ F G +
Sbjct: 419 EPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKS 478
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HPK ++YL L++L +E G
Sbjct: 479 HPKTNQIYLYLDELMSRCREAG 500
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 186/535 (34%), Positives = 295/535 (55%), Gaps = 44/535 (8%)
Query: 2 KDLKKIHAHLIKTGLAK-DPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K K +H HL TG + I A+ ++ D+ A VF ++ NL+ WN ++
Sbjct: 79 KGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVE-ARKVFDKMSVRNLYSWNHMLA 137
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQ-------LGLARD------- 106
G+++ NA LF M+ + +++ ++ AYA+ +GL RD
Sbjct: 138 GYAKLGDVNNARKLFDRMM-----EKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMG 192
Query: 107 ---------------------GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLM 145
Q+HG+V+ G + + ++I+ YA CG + AR +
Sbjct: 193 FNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTL 252
Query: 146 FDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEA 205
FDE+ + D+ AW +++ G AK G+++ + LF +M +N VSW+++ISGY RN EA
Sbjct: 253 FDEMLVK-DIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEA 311
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
L+ F +M + I P ++T S L ACA + A++ G+ +H +L+ F NTIVV+++IDM
Sbjct: 312 LDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDM 371
Query: 266 YCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
Y KCG E + VF+ + K+ + WN+M+ LA NG+ +A+++F+ + S LKPD I+
Sbjct: 372 YSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRIT 431
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
FI +L+AC+HSG V + +F MT + + P +HYSC++D LGRAG E + +M
Sbjct: 432 FIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENM 491
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
PD +W +LL CR H NIE+ ++ A+++IEL S YV +++LYA ++E
Sbjct: 492 SCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVE 551
Query: 445 EERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQE 499
+ R LM E I KE G S I+V + H F+A RLHP E+YLLL L +E
Sbjct: 552 KVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTEE 606
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 190/400 (47%), Gaps = 36/400 (9%)
Query: 51 NLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQL 110
+L I +++ SQ P L ++D L ++ + L + A+ + G +
Sbjct: 27 SLCIAQSLLDLSSQGRLPE--ALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCV 84
Query: 111 HGRVVKQGLEF-DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
H + G + + N +I MY CG EAR +FD++ ++ +WN M+ G AK G
Sbjct: 85 HLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSVR-NLYSWNHMLAGYAKLG 143
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
+++ +R+LFD+M+ ++ VSWN+++ Y + F EA+ L+R+ + ++ + F+ +L
Sbjct: 144 DVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLI 203
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG---CPE------------- 273
C KL ++ + +H ++ F N ++ ++I+D Y KCG C
Sbjct: 204 LCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHA 263
Query: 274 ---------------RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
A ++F+ +P+K W++++ G A N +EA+ F+ + +
Sbjct: 264 WTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGI 323
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
P+ +F + L AC + K + TY + + S ++D + G+LE +
Sbjct: 324 NPEQYTFSSCLCACASIAALKHGKQVHGYLIRTY-FRCNTIVVSSLIDMYSKCGMLEASC 382
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ M + D ++W +++SA ++G+ E A Q ++E
Sbjct: 383 CVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVE 422
>gi|326522230|dbj|BAK04243.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 293/511 (57%), Gaps = 20/511 (3%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L++IHAHL+ +G P + +A S + ++YA L+ Q + L N ++R +
Sbjct: 33 LREIHAHLLVSGRLASPSHHADFVASLASSS-HLSYARLLLPQ-RPATLLAHNGLLRALA 90
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY-------------AQLGLARDGAQL 110
+ P A F ++ P+ P ++ L +A + + +
Sbjct: 91 RGPCPGLAFAAFREL----PLAPDHYSFTFLVRAATSLAAAASATPVPTDVAVNLLAGSV 146
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
H + G D + + + MYA G + R F E+ + DVV +M+ L+ G+
Sbjct: 147 HAAAFQHGHATDPHVQSGAVSMYAAVGDVGAVRAAFAEIVSP-DVVCVTAMLGALSAGGD 205
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
+D +R LFD M R+ V+WN+M++GYVR + +EAL LF EMQ+ + SE T+VS+L A
Sbjct: 206 VDTARELFDGMPQRDHVAWNAMLTGYVRVGRSREALGLFDEMQKAGVAVSEVTLVSVLTA 265
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA++GA+ +G W+H+++ + ++ + TA++DMY KCG +++VF T+ ++ + W
Sbjct: 266 CAQMGALERGMWVHSYVCSRGMRVSVTLGTALVDMYSKCGVVTMSMEVFETMRERNIYTW 325
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
S + GLAMNG E ++LF ++S+ ++P+ ++F+AVL C+ +G V + + F M +
Sbjct: 326 TSALSGLAMNGMGEECLELFKRMESAGMEPNGVTFVAVLRGCSVAGLVEEGRACFDSMKD 385
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
+K++P ++HY CMVD GRAG L++A I SMP +P +WG+LL+A R H N+++ K
Sbjct: 386 KHKVEPWLEHYGCMVDLYGRAGRLDDAVDFINSMPVEPHEGVWGALLNASRIHNNVDLGK 445
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
A ++ E++ +VL+SN+YA S+ ++ + R +MK ++K PGCS IEVDG+V
Sbjct: 446 HAMHKLTEIESKNDAAHVLLSNIYAESHNWKGVSKVRNMMKSKGVKKMPGCSAIEVDGKV 505
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
HEF G + HP+ ++ +L ++ ++ G
Sbjct: 506 HEFFVGSKSHPRYKDIQTMLAEMSHRLRLQG 536
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 275/462 (59%), Gaps = 10/462 (2%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A +F QI +L WNT+I G++Q A LF + SP++ T+ ++ AY
Sbjct: 207 ARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE----SPVR-DVFTWTAMVYAYV 261
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
Q G+ + RV + + + +N +I YA + R +F+E+ ++ +WN
Sbjct: 262 QDGMLDEAR----RVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFP-NIGSWN 316
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
MI G + G++ ++R LFD M R++VSW ++I+GY +N ++EA+ + EM+
Sbjct: 317 IMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESL 376
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
+ T L+ACA + A+ G+ +H +V +E +V A++ MYCKCGC + A VF
Sbjct: 377 NRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVF 436
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
V K + WN+M+ G A +G+ +A+ +F + ++ +KPD I+ + VL+AC+H+G +
Sbjct: 437 QGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTD 496
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ +YF M + Y I P+ KHY+CM+D LGRAG LEEA+ LIR+MP +PDA WG+LL A
Sbjct: 497 RGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGA 556
Query: 400 CRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP 459
R HGN+E+ +QAA+ + +++ + S YVL+SNLYAAS ++ + + RL M+++ ++K P
Sbjct: 557 SRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTP 616
Query: 460 GCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G S +EV ++H F G HP+ +Y L +L L ++ G
Sbjct: 617 GYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEG 658
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 172/367 (46%), Gaps = 63/367 (17%)
Query: 89 LTYPSLFKAY---AQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLM 145
++Y ++ Y A+ LARD + + D F N ++ YA L +AR++
Sbjct: 65 VSYNAMISGYLRNAKFSLARD-------LFDKMPHKDLFSWNLMLTGYARNRRLRDARML 117
Query: 146 FDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEA 205
FD + E DVV+WN+M+ G + G +DE+R +FD+M +N++SWN +++ YVR+ + +EA
Sbjct: 118 FDSM-PEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEA 176
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
LF S++ ++S NC ++
Sbjct: 177 RRLFE-------SKSDWELIS----------------------CNC----------LMGG 197
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y K A Q+F+ +P + L WN+M+ G A +G ++A +LF + S ++ D ++
Sbjct: 198 YVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLF---EESPVR-DVFTW 253
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
A++ A G +++A+ F M + ++ Y+ M+ + ++ +L MP
Sbjct: 254 TAMVYAYVQDGMLDEARRVFDEMPQKREMS-----YNVMIAGYAQYKRMDMGRELFEEMP 308
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
P+ W ++S ++G++ A+ + + D S + + YA + +EEAM
Sbjct: 309 F-PNIGSWNIMISGYCQNGDLAQARNLFDMMPQRD---SVSWAAIIAGYAQNGLYEEAMN 364
Query: 446 ERLLMKE 452
+ MK
Sbjct: 365 MLVEMKR 371
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 178/388 (45%), Gaps = 65/388 (16%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQ 100
+F ++ +LF WN ++ G++++ R+A +LF M P++ +++ ++ Y +
Sbjct: 86 LFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSM-------PEKDVVSWNAMLSGYVR 138
Query: 101 LGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNS 160
G + + R+ + + N ++ Y G L EAR +F E +++++++ N
Sbjct: 139 SGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLEEARRLF-ESKSDWELISCNC 193
Query: 161 MIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS 220
++ G K + ++R+LFD++ R+ +SWN+MISGY ++ +A LF E +++
Sbjct: 194 LMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDV--- 250
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
FT W TA++ Y + G + A +VF+
Sbjct: 251 -FT------------------W-----------------TAMVYAYVQDGMLDEARRVFD 274
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
+P+K +N M+ G A + +LF + N+ S+ +++ +G + Q
Sbjct: 275 EMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIG----SWNIMISGYCQNGDLAQ 330
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL---L 397
A++ F +M + + ++ ++ + GL EEA ++ M D +++ + L
Sbjct: 331 ARNLFDMMPQRDSVS-----WAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCAL 385
Query: 398 SACRKHGNIEMAKQAAKQIIELDKNESC 425
SAC +E+ KQ Q++ + C
Sbjct: 386 SACADIAALELGKQVHGQVVRTGYEKGC 413
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 49/243 (20%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G D + +FD M RN+VS+N+MISGY+RN KF A +LF +M +++ F+ +L
Sbjct: 47 GHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDL----FSWNLML 102
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
A+ +R A +F+++P+K +
Sbjct: 103 TGYARNRRLRD-----------------------------------ARMLFDSMPEKDVV 127
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN+M+ G +G+ +EA +F + N IS+ +L A SG++ +A+ F
Sbjct: 128 SWNAMLSGYVRSGHVDEARDVFDRMPHKN----SISWNGLLAAYVRSGRLEEARRLFESK 183
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
++ I +C++ + +L +A +L +P D I W +++S + G++
Sbjct: 184 SDWELISC-----NCLMGGYVKRNMLGDARQLFDQIPV-RDLISWNTMISGYAQDGDLSQ 237
Query: 409 AKQ 411
A++
Sbjct: 238 ARR 240
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 255 NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ 314
+T+ T I + + G + AL VF+ +P + +N+M+ G N + A LF +
Sbjct: 32 HTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMP 91
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
+L S+ +LT + ++ A+ F M E + ++ M+ R+G +
Sbjct: 92 HKDL----FSWNLMLTGYARNRRLRDARMLFDSMPEK-----DVVSWNAMLSGYVRSGHV 142
Query: 375 EEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+EA + MP ++I W LL+A + G +E A++
Sbjct: 143 DEARDVFDRMPH-KNSISWNGLLAAYVRSGRLEEARR 178
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 286/506 (56%), Gaps = 16/506 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+++HA + K+ D + ++ A C P A VF + + N+ WN++I
Sbjct: 167 EQVHALVTKSSHGSDVYIGTALVDMYAKCERP----EEAQKVFDAMPERNIVSWNSLITC 222
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LE 120
+ Q+ A+ LF+ M+ + P +T S+ A A L R+G Q+H R+VK
Sbjct: 223 YEQNGPVDEALALFVRMMKDGFV-PDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFR 281
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++N ++ MYA CG EA+ +FD + VV+ SMI G AK + +++ +F +
Sbjct: 282 EDMVLNNALVDMYAKCGRTWEAKCVFDRMAIR-SVVSETSMITGYAKSANVGDAQAVFLQ 340
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
MV +N V+WN +I+ Y N + +EAL LF ++ +++ P+ +T ++LNACA L ++ G
Sbjct: 341 MVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLG 400
Query: 241 EWIHNFLVTNCF------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
+ H ++ F E + V +++DMY K G +VF + + WN+M+
Sbjct: 401 QQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMI 460
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G A NG +A+ LF + SN +PD ++ I VL+AC HSG V + + YF MTE + I
Sbjct: 461 VGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGI 520
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P+ HY+CM+D LGRAG L+E E+LI +MP +PDA++W SLL ACR H NI+M + AA
Sbjct: 521 IPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAG 580
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
++ ELD + S YVL+SN+YA ++ + R MK + K+PGCS IE+ +V+ F+
Sbjct: 581 KLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFL 640
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEM 500
A +HP E++ L + + + M
Sbjct: 641 ARDNIHPCRNEIHDTLRIIQMQMSRM 666
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 170/335 (50%), Gaps = 17/335 (5%)
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ F+ NT++ YA G L +AR +FD + + ++N+++ A+ G D++ LF +
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFDGMPHR-NTFSYNALLSACARLGRADDALALFGAI 107
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+ S+N++++ ++ + +AL M + + ++ S L+ACA A R GE
Sbjct: 108 PDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGE 167
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H + + + + TA++DMY KC PE A +VF+ +P++ + WNS++ NG
Sbjct: 168 QVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNG 227
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+EA+ LF + PD ++ +V++AC + + T M ++ + + +
Sbjct: 228 PVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLN 287
Query: 362 SCMVDALGRAGLLEEAEKL-----IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ +VD + G EA+ + IRS+ S+ S+++ K N+ A+ Q+
Sbjct: 288 NALVDMYAKCGRTWEAKCVFDRMAIRSVVSET------SMITGYAKSANVGDAQAVFLQM 341
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+E KN VL++ YA + + EEA+ RL ++
Sbjct: 342 VE--KNVVAWNVLIAT-YAHNSEEEEAL--RLFVR 371
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 172/412 (41%), Gaps = 71/412 (17%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A +F I P+ +N ++ +Q +A L F+ + ++ S
Sbjct: 95 GRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDA-LRFLAAMHADDFVLNAYSFASA 153
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A A +R G Q+H V K D +I ++ MYA C EA+ +FD + E +
Sbjct: 154 LSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAM-PERN 212
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+V+WNS+I + G +D EAL LF M +
Sbjct: 213 IVSWNSLITCYEQNGPVD-------------------------------EALALFVRMMK 241
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV-TNCFELNTIVVTAIIDMYCKCGCPE 273
P E T+ S+++ACA L A R+G +H +V ++ F + ++ A++DMY KCG
Sbjct: 242 DGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTW 301
Query: 274 RALQVFNTVP-------------------------------KKGLSCWNSMVFGLAMNGY 302
A VF+ + +K + WN ++ A N
Sbjct: 302 EAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSE 361
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIK--PSIK 359
E EA++LF L+ ++ P + ++ VL AC + + + + ++ E ++ P
Sbjct: 362 EEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESD 421
Query: 360 HY--SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ + +VD + G + + K+ M + D + W +++ ++G + A
Sbjct: 422 VFVGNSLVDMYLKTGSISDGAKVFERMAAR-DNVSWNAMIVGYAQNGRAKDA 472
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 278/488 (56%), Gaps = 34/488 (6%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H IK+G D + IL + AYLVF ++++ + WN II Q+
Sbjct: 359 QVHCLAIKSGFDVDVCVRNAILDLYGKCKALVE-AYLVFQEMEQRDSVSWNAIIAALEQN 417
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ I +ML ++P TY S+ KA A L G+ +HG+ +K GL D F+
Sbjct: 418 ECYEDTIAYLNEML-RYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFV 476
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+T++ MY KCG I E+++L D++ +
Sbjct: 477 SSTVVDMYC--------------------------------KCGMITEAQKLHDRIGGQE 504
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSWNS+ISG+ N + +EA + F EM + +KP FT ++L+ CA L I G+ IH
Sbjct: 505 LVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHG 564
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + + + ++DMY KCG +L +F K WN+M+ G A++G E
Sbjct: 565 QIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFE 624
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+++F +Q +N+ P++ +F+AVL AC+H G ++ YF LMT YK++P ++H++CMV
Sbjct: 625 ALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMV 684
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGR+ +EA K IRSMP + DA+IW +LLS C+ ++E+A+ AA ++ LD ++S
Sbjct: 685 DILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSS 744
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
Y+L+SN+YA S ++ + R LM++ +++KEPGCS IEV E+H F+AG ++HP++ E
Sbjct: 745 VYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSRE 804
Query: 486 VYLLLNDL 493
VY +LN+L
Sbjct: 805 VYEMLNNL 812
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 162/371 (43%), Gaps = 45/371 (12%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
AGD A +F + P++ WN ++ G+ Q R+++ L ++M + P R T
Sbjct: 83 AGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEM-ARRGVAPDRTTLAV 141
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
L KA L G Q+H VK GLE D + ++ MY
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYG------------------- 182
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
KC ++++ R F M RN+VSW + I+G V+N ++ LELF +MQ
Sbjct: 183 -------------KCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQ 229
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ S+ S+ +CA + + +H + N F + +V TAI+D+Y K
Sbjct: 230 RLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLV 289
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A + F ++P + N+M+ GL G EA++LF + S + D +S V +AC
Sbjct: 290 DARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSAC- 348
Query: 334 HSGKVNQAKDYFT-LMTETYKIKPSIKHYSC----MVDALGRAGLLEEAEKLIRSMPSDP 388
+ K Y L IK C ++D G+ L EA + + M
Sbjct: 349 -----AEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEM-EQR 402
Query: 389 DAIIWGSLLSA 399
D++ W ++++A
Sbjct: 403 DSVSWNAIIAA 413
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 177/408 (43%), Gaps = 50/408 (12%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++HAH IK + D + + I+ + A + A F + + N ++ G +
Sbjct: 257 RQLHAHAIKNKFSADRVVGTAIVDV-YAKADSLVDARRAFFSLPNHTVQACNAMMVGLVR 315
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ LF + S I ++ +F A A++ G Q+H +K G + D
Sbjct: 316 TGLGAEALQLF-QFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVC 374
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N I+ +Y C L EA L+F E++ + D V+WN++I L +
Sbjct: 375 VRNAILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAALEQ----------------- 416
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N +++ + EM ++P +FT S+L ACA L ++ G +H
Sbjct: 417 --------------NECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVH 462
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + L+ V + ++DMYCKCG A ++ + + + L WNS++ G ++N
Sbjct: 463 GKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSE 522
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA K FS + +KPD+ ++ VL C + + K + + + S +
Sbjct: 523 EAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYIS-STL 581
Query: 365 VDALGRAG-------LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
VD + G + E+A+KL D + W +++ HG
Sbjct: 582 VDMYAKCGNMPDSLLMFEKAQKL--------DFVSWNAMICGYALHGQ 621
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 142/301 (47%), Gaps = 8/301 (2%)
Query: 90 TYPSLFKAYAQLGLAR--DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFD 147
T+ L++ A G + G H R++ G F+ N ++ MYA CG + AR +FD
Sbjct: 4 TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
V D V+WN+M+ A G+ + LF M + VSWN+++SGY + F++++
Sbjct: 64 -VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVG 122
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
L EM + + P T+ LL AC L + G IH V E++ +A++DMY
Sbjct: 123 LSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYG 182
Query: 268 KCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIA 327
KC E AL+ F+ + ++ W + + G N ++LF +Q L ++ +
Sbjct: 183 KCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYAS 242
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLEEAEKLIRSMP 385
V +C ++ A+ L K K S + +VD +A L +A + S+P
Sbjct: 243 VFRSCAAITCLSTARQ---LHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLP 299
Query: 386 S 386
+
Sbjct: 300 N 300
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 188/485 (38%), Gaps = 80/485 (16%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAF---CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+IHA +KTGL D A S ++ C S + A F + + N W I G
Sbjct: 157 QIHAVAVKTGLEMDVRAGSALVDMYGKCRS----LEDALRFFHGMGERNSVSWGAAIAGC 212
Query: 63 SQSSTPRNAILLFIDM--LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
Q+ + LF+ M L QP Y S+F++ A + QLH +K
Sbjct: 213 VQNEQYTRGLELFVQMQRLGLGVSQP---AYASVFRSCAAITCLSTARQLHAHAIKNKFS 269
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D+ + I+ +YA K + ++RR F
Sbjct: 270 ADRVVGTAIVDVYA--------------------------------KADSLVDARRAFFS 297
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ + + N+M+ G VR EAL+LF+ M I ++ + +ACA++ QG
Sbjct: 298 LPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQG 357
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H + + F+++ V AI+D+Y KC A VF + ++ WN+++ L N
Sbjct: 358 LQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQN 417
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACN-----HSGKVNQAK--------DYFT- 346
+ I + + ++PD ++ +VL AC G V K D F
Sbjct: 418 ECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVS 477
Query: 347 -----------LMTETYKIKPSIK-----HYSCMVDALGRAGLLEEAEKLIRSMPS---D 387
++TE K+ I ++ ++ EEA+K M
Sbjct: 478 STVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVK 537
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEER 447
PD + ++L C IE+ KQ QII K E G +S+ Y M +
Sbjct: 538 PDHFTYATVLDTCANLATIELGKQIHGQII---KQEMLGDEYISSTLVDMYAKCGNMPDS 594
Query: 448 LLMKE 452
LLM E
Sbjct: 595 LLMFE 599
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/504 (35%), Positives = 282/504 (55%), Gaps = 12/504 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IHA ++ + +D A R L + +G ++ A + + P + + I S
Sbjct: 42 EIHAAAVRASVDQDKAVAFR-LQRAYAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSR 100
Query: 66 STPRNAILLFIDMLVTS-PIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
R A+ L +ML++ + P T + A L + R LHG VK L + +
Sbjct: 101 GLHRAALALLSEMLLSRHGLLPTAHTLSASLPACGCLAVGR---ALHGYAVKLALSGEPY 157
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA G + AR +FD + + VV+ +M+ AK G++D++R LFD + +
Sbjct: 158 VATALLGMYARAGEAAAARALFDGMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALPRK 217
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V WN+M+ GY ++ + EAL LFR+M ++P E ++V L+A A+LG G W+H
Sbjct: 218 DLVCWNAMMDGYTQHGRPSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLH 277
Query: 245 NFLVTNC----FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG---LSCWNSMVFGL 297
+F+ LN V TA++DMY KCG E A+ VF + G + WN+M+ G
Sbjct: 278 SFVANGGRRARVRLNARVGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGY 337
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AM+G EA++ F L++ L P I+FI VL AC+HSG V++ + F M E Y I P
Sbjct: 338 AMHGRSREALEAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPK 397
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
++HY CMVD LGRAG +EEA L++SM + PDA +W SLL ACR H N+ + ++ A ++
Sbjct: 398 VEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLV 457
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
S YVL+SN+YAA+ ++ E R +M+ ++KEPGCS +EV V EFVAG
Sbjct: 458 GNGLANSGTYVLLSNMYAAAGKWREVGRVRSMMRASGVQKEPGCSAVEVGRRVVEFVAGD 517
Query: 478 RLHPKAPEVYLLLNDLGLLIQEMG 501
R HP++ E+Y L ++ + + G
Sbjct: 518 RSHPRSAEIYAKLEEVNSIARARG 541
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/488 (33%), Positives = 288/488 (59%), Gaps = 2/488 (0%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H +K G + L + + +A +F ++ ++ W T++ G+++
Sbjct: 162 VHCVALKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRG 221
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A +F M+V +QP +T ++ A Q+GL G ++ V G+ +
Sbjct: 222 LADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLE 281
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N +I M+ G + AR +FD + + DV +W +M+ AKCG+++ + RLFD M RN
Sbjct: 282 NALIDMFGKFGCAASAREVFDSMAVK-DVYSWTTMVNAYAKCGDLESAARLFDDMPRRNA 340
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH-N 245
VSW+ MI+ Y + + +EA+ LF+ M E+ ++P +VS+L+ACA+LG + G WI+ N
Sbjct: 341 VSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDN 400
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++++ L + A ID+Y KCG + A ++F + ++ + WNSM+ A++G E
Sbjct: 401 YVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEE 460
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
++LF L+ + + PD I+F+ +L+AC+HSG V++ + YF M Y I+P +HY+CM+
Sbjct: 461 VLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMI 520
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LG+ GLLEEA ++ + MP + D WG+LL+ACR +GN+E+ + AA ++++L+ +S
Sbjct: 521 DLLGKIGLLEEAFEVAKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLVQLNPLDSG 580
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVLMS +YA+ ++++ R+LM+E ++K PGCS IEVDG+ HEF+ H + +
Sbjct: 581 IYVLMSQIYASKNKWDQVKILRVLMRERGVKKNPGCSSIEVDGKFHEFLVADVSHVHSED 640
Query: 486 VYLLLNDL 493
+Y L ++
Sbjct: 641 IYAALKNI 648
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 193/412 (46%), Gaps = 17/412 (4%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++HA L +GLA ASR+LAFC S +++A + + PN ++ T++R F +
Sbjct: 55 QLHALLTVSGLAAHRFPASRLLAFCALSTPPRVDHAAAILARASAPNAYMLATMMRAFLR 114
Query: 65 SSTPRNAILLFIDMLVTS-PIQPQRLTYPSLFKAYAQLGLARDGAQ-LHGRVVKQG-LEF 121
+ P A LF ++ S P + L + A + G + +H +K G +
Sbjct: 115 ARLPSRASALFRRVIRESLPADARTLVFAIKAAASEHEHHSPSGGEGVHCVALKWGHVAQ 174
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ N +++ YAN L+ AR +FDE+ + DVV+W +++ G A+ G DE+ R+F +M
Sbjct: 175 SVLVGNALVHFYANHRSLAHARNLFDEM-PDRDVVSWTTLVDGYARRGLADEAWRVFCRM 233
Query: 182 V-----SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG- 235
V N V+ +++S + ++R + + + S +L++ K G
Sbjct: 234 VVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGC 293
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A E + V + + T+V + Y KCG E A ++F+ +P++ W+ M+
Sbjct: 294 AASAREVFDSMAVKDVYSWTTMV-----NAYAKCGDLESAARLFDDMPRRNAVSWSCMIA 348
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
+ EA++LF + ++P ++VL+AC G ++ + + + K
Sbjct: 349 AYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAV 408
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
++ + +D + G + A KL M ++ + + W S++ A HG E
Sbjct: 409 LTVNLGNAFIDVYAKCGDFDAASKLFAEM-AERNVVSWNSMIMAHAVHGQSE 459
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 286/501 (57%), Gaps = 11/501 (2%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
L++ H+ LI+ G+A A R+L+F P YA + P+ ++N +
Sbjct: 21 LRQHHSQLIRLGVASHAAHARRLLSFLARDPDSHFPYASRLLAHHPDPHPALFNPLF--- 77
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
S+ P + ++++ P++P T+P + + L L AQLH ++K G
Sbjct: 78 --SALPTRHAARLLALMLSLPLRPDHFTFPQILPSAQPLHLV---AQLHALLLKLGFHAH 132
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
N ++ Y A +F DVV+W +M+ GL K G D++R LFD M
Sbjct: 133 TQSLNALLAAYLANARPDLASRVFRGGGGALDVVSWTTMVGGLLKLGLFDDARVLFDGMP 192
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
RN VSWN+M+SGYV+ +F +ALE+F EM+ + + + F + + AC GA+ +G
Sbjct: 193 ERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGRE 252
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGLAMN 300
+H ++ + +++ + TA++DMYCKCGC E A +VF +P KGL+ WN M+ G A++
Sbjct: 253 VHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVH 312
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G +A+KLF ++ + PD ++ + VLTAC H+G +++ + YF + + Y I+P ++H
Sbjct: 313 GRGEDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEH 372
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD GRAG LEEA+K+I+ MP +PD + G+L A + HG++++ + ++IELD
Sbjct: 373 YGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELD 432
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
S YVL++NL A + ++E+ R LM E + KE G S+IEV GEV EF GG H
Sbjct: 433 PQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQGEVCEFQCGGLCH 492
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+A EVY + D+ I+ G
Sbjct: 493 PRAEEVYAMARDMMREIRAEG 513
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 290/497 (58%), Gaps = 23/497 (4%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K+ ++IH H++K G D + +++ G + A+ VF + ++ + +I+G
Sbjct: 108 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ-NGRLEDAHKVFDESPHRDVVSYTALIKG 166
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++ NA +F ++ V + ++ ++ YA+ G ++ +L ++K +
Sbjct: 167 YASRGYIENAQKMFDEIPVKDVV-----SWNAMISGYAETGNYKEALELFKDMMKTNVRP 221
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVD-----TEFDVVAWNSMIIGLAKCGEIDESRR 176
D+ T++ A G + R + +D + +V N++I +KCGE++ +
Sbjct: 222 DESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIV--NALIDLYSKCGELETACG 279
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
LF+ + ++ +SWN++I GY +KEAL LF+EM P++ TM+S+L ACA LGA
Sbjct: 280 LFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 339
Query: 237 IRQGEWIHNFL------VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
I G WIH ++ V N L T ++IDMY KCG E A QVFN++ K LS W
Sbjct: 340 IDIGRWIHVYIDKRLKGVANASSLRT----SLIDMYAKCGDIEAAHQVFNSILHKSLSSW 395
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N+M+FG AM+G + + +FS ++ + ++PD I+F+ +L+AC+HSG ++ + F MT+
Sbjct: 396 NAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQ 455
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
YK+ P ++HY CM+D LG +GL +EAE++I +M +PD +IW SLL AC+ HGN+E+ +
Sbjct: 456 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGE 515
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
A+ +I+++ YVL+SN+YA + ++ E R L+ + ++K PGCS IE+D V
Sbjct: 516 SFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVV 575
Query: 471 HEFVAGGRLHPKAPEVY 487
HEF+ G + HP+ E+Y
Sbjct: 576 HEFIIGDKFHPRNREIY 592
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 33/254 (12%)
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+ + N + WN+M G+ + AL+L+ M + P+ +T LL +CAK A
Sbjct: 47 VFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKA 106
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG-----------CPER----------- 274
++G+ IH ++ +L+ V T++I MY + G P R
Sbjct: 107 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKG 166
Query: 275 ---------ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
A ++F+ +P K + WN+M+ G A G EA++LF + +N++PD +
Sbjct: 167 YASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 226
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ V++AC SG + + + + + + ++K + ++D + G LE A L +P
Sbjct: 227 VTVVSACAQSGSIELGRQVHSWI-DDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLP 285
Query: 386 SDPDAIIWGSLLSA 399
D I W +L+
Sbjct: 286 YK-DVISWNTLIGG 298
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/491 (35%), Positives = 291/491 (59%), Gaps = 3/491 (0%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
++K+IH H + GL L G A +F ++ N+ +NT+I GF
Sbjct: 80 EVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGF 139
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++ + LF DM + ++P T L QLG + G +H ++ K +
Sbjct: 140 AKVGNILGILELFHDMR-SHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSN 198
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
++N ++ MY C L AR +FD E D V+WN++I G AK GE++ + LF+++
Sbjct: 199 LILYNALLDMYVKCNELKLARKVFDG-PMEKDTVSWNTIIAGYAKVGELELACDLFNQIP 257
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+R+ VSWNS+ISGY +N + LF M +N+KP + T+V+L++A A++GA+ QG W
Sbjct: 258 TRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRW 317
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH V ++ +A+IDMYCKCG ERA +FN +P+K ++ W +M+ G A +G+
Sbjct: 318 IHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGF 377
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
N+A++LFS +Q+ KP+ ++F++VL AC+HSG V++ F+ M + Y I+P ++HY
Sbjct: 378 GNKALELFSVMQAET-KPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYG 436
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C+VD L R+G L +A +I MP +P IWG++LSACR H N+E+A++A ++++L+
Sbjct: 437 CLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALMELLKLEPE 496
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+ GY+L+SN+YA ++ + R +M ++K GCS + VDG VH+F A + HP+
Sbjct: 497 KEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMVHDFTASNKQHPR 556
Query: 483 APEVYLLLNDL 493
++ +L+ L
Sbjct: 557 WMDICSILSFL 567
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 188/417 (45%), Gaps = 78/417 (18%)
Query: 24 SRILAF-CTSPAGDINYAYLVFTQIKK-PNLFIWNTIIRGFSQSSTPRNAILLFIDMLVT 81
SR+L F S ++ A L+F PNL+I+NT+I GF S+ A ++ ML
Sbjct: 2 SRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILGFPFSN--EKAFTIYRSML-Q 58
Query: 82 SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQFIHNTIIYMYANCGFLS 140
+ P R T+ L + + + Q+H + G L ++++ N++I Y + G
Sbjct: 59 NGTYPDRQTFLYLLQTTKFVAEVK---QIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFE 115
Query: 141 EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNV 200
AR +FDE+ ++ +VV++N+MI+G AK G I
Sbjct: 116 CARQLFDEM-SDRNVVSYNTMILGFAKVGNI----------------------------- 145
Query: 201 KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
LELF +M+ ++P +FTM+ LL C +LG + G+ +H + + N I+
Sbjct: 146 --LGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYN 203
Query: 261 AIIDMYCKC-------------------------------GCPERALQVFNTVPKKGLSC 289
A++DMY KC G E A +FN +P + +
Sbjct: 204 ALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVS 263
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WNS++ G A NG LF+ + + N+KPD ++ + +++A G ++Q + L
Sbjct: 264 WNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAV 323
Query: 350 ETYKIKPSIKHY--SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
K+ I+ + S ++D + G +E A + +P + D W ++++ HG
Sbjct: 324 ---KMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIP-EKDVTTWTTMITGFAFHG 376
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 278/495 (56%), Gaps = 34/495 (6%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+HAHL+ + + + I+ + G ++ A +F ++ ++ W +I GFSQ++
Sbjct: 109 VHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNN 168
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
PR+A+LLF ML +QP T SL KA G QLH +K G + ++
Sbjct: 169 RPRDALLLFPQMLRLG-LQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVG 227
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+ ++ MYA +CG +D ++ FD M +++
Sbjct: 228 SALVDMYA--------------------------------RCGHMDAAQLAFDGMPTKSE 255
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSWN++ISG+ R + + AL L +MQ +N +P+ FT S+ +ACA +GA+ QG+W+H
Sbjct: 256 VSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAH 315
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
++ + +L + ++DMY K G + A +VF+ + K + WN+M+ G A +G E
Sbjct: 316 MIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKET 375
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+ F + ++P+ ISF+ VLTAC+HSG +++ YF LM + YK++P + HY VD
Sbjct: 376 LDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVD 434
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR GLL+ AE+ IR MP +P A +WG+LL ACR H N+E+ AA++ ELD ++S
Sbjct: 435 LLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGP 494
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
+L+SN+YA++ ++ + + R +MKE ++K+P CS +E++ VH FVA HP+ E+
Sbjct: 495 RMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEI 554
Query: 487 YLLLNDLGLLIQEMG 501
++ I+E+G
Sbjct: 555 RGKWEEISGKIKEIG 569
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +HAH+IK+GL + +L + AG I+ A VF ++ KP++ WNT++ G +Q
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDM-YAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ + F ML I+P +++ + A + GL +G + K +E D
Sbjct: 369 HGLGKETLDRFEQMLRIG-IEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVP 427
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ T + + G L A E+ E W +++
Sbjct: 428 HYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/501 (34%), Positives = 282/501 (56%), Gaps = 35/501 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K ++I H+I+ G D + +L+ + G + A+ VF +I K N+ WN +I
Sbjct: 429 LKRGQQIQDHIIEAGYGSDDRVRTALLSM-YAKCGSLKDAHRVFEKISKQNVVAWNAMIT 487
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ Q NA+ F L+ I+P T+ S+ G +H ++K GLE
Sbjct: 488 AYVQHEQYDNALATF-QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLE 546
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + N ++ M+ NC G++ ++ LF+
Sbjct: 547 SDLHVSNALVSMFVNC--------------------------------GDLMSAKNLFND 574
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VSWN++I+G+V++ K + A + F+ MQE IKP + T LLNACA A+ +G
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H + F+ + +V T +I MY KCG E A QVF+ +PKK + W SM+ G A +
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQH 694
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA++LF +Q +KPD+I+F+ L+AC H+G + + +F M E + I+P ++H
Sbjct: 695 GRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEH 753
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD GRAGLL EA + I M +PD+ +WG+LL AC+ H N+E+A++AA++ +ELD
Sbjct: 754 YGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELD 813
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
N++ +V++SN+YAA+ ++E + R +M + + K+PG S IEVDG+VH F + + H
Sbjct: 814 PNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTH 873
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ E++ L L + ++++G
Sbjct: 874 PQTEEIHAELERLHMEMRQLG 894
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 210/453 (46%), Gaps = 37/453 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
KK+HA + + G + + IL+ T G + A VF +K N+ W +I GF+Q
Sbjct: 332 KKVHARMKEVGWDTEIYVGTAILSMYTK-CGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A LF + ++ S I+P R+T+ S+ A + + G Q+ +++ G D
Sbjct: 391 HGRIDEA-FLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA CG L +A +F+++ + +VVAW
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQ-NVVAW-------------------------- 482
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N+MI+ YV++ ++ AL F+ + ++ IKP+ T S+LN C ++ G+W+H
Sbjct: 483 -----NAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVH 537
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ E + V A++ M+ CG A +FN +PK+ L WN+++ G +G
Sbjct: 538 FLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQ 597
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A F +Q S +KPD I+F +L AC + + + L+TE + + +
Sbjct: 598 VAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEA-AFDCDVLVGTGL 656
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI-IELDKNE 423
+ + G +E+A ++ +P + W S+++ +HG + A + Q+ E K +
Sbjct: 657 ISMYTKCGSIEDAHQVFHKLPK-KNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPD 715
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
+V + A + EE + MKE IE
Sbjct: 716 WITFVGALSACAHAGLIEEGLHHFQSMKEFNIE 748
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 202/404 (50%), Gaps = 38/404 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ D ++I+ H+ K+G+ D I L + G+ A +F +++ +++ WN ++
Sbjct: 126 LGDGERIYNHIKKSGVQPD-IFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLG 184
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ Q A L + +V ++P + T+ S+ A A G +L+ ++K G +
Sbjct: 185 GYVQHGLYEEAFKLH-EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWD 243
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ +I M+ KCG+I ++ ++FD
Sbjct: 244 TDLFVGTALINMHI--------------------------------KCGDIGDATKVFDN 271
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ +R+ V+W SMI+G R+ +FK+A LF+ M+E+ ++P + VSLL AC A+ QG
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG 331
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H + ++ V TAI+ MY KCG E AL+VF+ V + + W +M+ G A +
Sbjct: 332 KKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQH 391
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-YKIKPSIK 359
G +EA F+ + S ++P+ ++F+++L AC+ + + + + E Y ++
Sbjct: 392 GRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
+ ++ + G L++A ++ + S + + W ++++A +H
Sbjct: 452 --TALLSMYAKCGSLKDAHRVFEKI-SKQNVVAWNAMITAYVQH 492
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 188/377 (49%), Gaps = 37/377 (9%)
Query: 42 LVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL 101
+VF IK N ++ S++ A+ + ++ + +S IQ R TY +L + +
Sbjct: 67 VVFADIKDTQKA--NAVLNRLSKAGQFNEAMQV-LERVDSSHIQIYRQTYSALLQLCIKF 123
Query: 102 GLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM 161
DG +++ + K G++ D F+ WN++
Sbjct: 124 KNLGDGERIYNHIKKSGVQPDIFM--------------------------------WNTL 151
Query: 162 IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSE 221
I AKCG ++++FD M ++ SWN ++ GYV++ ++EA +L +M + ++KP +
Sbjct: 152 INMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDK 211
Query: 222 FTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
T VS+LNACA + +G ++N ++ ++ + V TA+I+M+ KCG A +VF+
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+P + L W SM+ GLA +G +A LF ++ ++PD ++F+++L ACNH + Q
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG 331
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
K M E I + ++ + G +E+A ++ + + + W ++++
Sbjct: 332 KKVHARMKEV-GWDTEIYVGTAILSMYTKCGSMEDALEVF-DLVKGRNVVSWTAMIAGFA 389
Query: 402 KHGNIEMAKQAAKQIIE 418
+HG I+ A ++IE
Sbjct: 390 QHGRIDEAFLFFNKMIE 406
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/501 (34%), Positives = 282/501 (56%), Gaps = 35/501 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K ++I H+I+ G D + +L+ + G + A+ VF +I K N+ WN +I
Sbjct: 429 LKRGQQIQDHIIEAGYGSDDRVRTALLSM-YAKCGSLKDAHRVFEKISKQNVVAWNAMIT 487
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ Q NA+ F L+ I+P T+ S+ G +H ++K GLE
Sbjct: 488 AYVQHEQYDNALATF-QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLE 546
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + N ++ M+ NC G++ ++ LF+
Sbjct: 547 SDLHVSNALVSMFVNC--------------------------------GDLMSAKNLFND 574
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VSWN++I+G+V++ K + A + F+ MQE IKP + T LLNACA A+ +G
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H + F+ + +V T +I MY KCG E A QVF+ +PKK + W SM+ G A +
Sbjct: 635 RRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQH 694
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA++LF +Q +KPD+I+F+ L+AC H+G + + +F M E + I+P ++H
Sbjct: 695 GRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEH 753
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD GRAGLL EA + I M +PD+ +WG+LL AC+ H N+E+A++AA++ +ELD
Sbjct: 754 YGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELD 813
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
N++ +V++SN+YAA+ ++E + R +M + + K+PG S IEVDG+VH F + + H
Sbjct: 814 PNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTH 873
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ E++ L L + ++++G
Sbjct: 874 PQTEEIHAELERLHMEMRQLG 894
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 210/453 (46%), Gaps = 37/453 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
KK+HA + + G + + IL+ T G + A VF +K N+ W +I GF+Q
Sbjct: 332 KKVHARMKEVGWDTEIYVGTAILSMYTK-CGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A LF + ++ S I+P R+T+ S+ A + + G Q+ +++ G D
Sbjct: 391 HGRIDEA-FLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA CG L +A +F+++ + +VVAW
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQ-NVVAW-------------------------- 482
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N+MI+ YV++ ++ AL F+ + ++ IKP+ T S+LN C ++ G+W+H
Sbjct: 483 -----NAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVH 537
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ E + V A++ M+ CG A +FN +PK+ L WN+++ G +G
Sbjct: 538 FLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQ 597
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A F +Q S +KPD I+F +L AC + + + L+TE + + +
Sbjct: 598 VAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEA-AFDCDVLVGTGL 656
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI-IELDKNE 423
+ + G +E+A ++ +P + W S+++ +HG + A + Q+ E K +
Sbjct: 657 ISMYTKCGSIEDAHQVFHKLPK-KNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPD 715
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
+V + A + EE + MKE IE
Sbjct: 716 WITFVGALSACAHAGLIEEGLHHFQSMKEFNIE 748
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 202/404 (50%), Gaps = 38/404 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ D ++I+ H+ K+G+ D I L + G+ A +F +++ +++ WN ++
Sbjct: 126 LGDGERIYNHIKKSGVQPD-IFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLG 184
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ Q A L + +V ++P + T+ S+ A A G +L+ ++K G +
Sbjct: 185 GYVQHGLYEEAFKLH-EQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWD 243
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ +I M+ KCG+I ++ ++FD
Sbjct: 244 TDLFVGTALINMHI--------------------------------KCGDIGDATKVFDN 271
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ +R+ V+W SMI+G R+ +FK+A LF+ M+E+ ++P + VSLL AC A+ QG
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG 331
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H + ++ V TAI+ MY KCG E AL+VF+ V + + W +M+ G A +
Sbjct: 332 KKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQH 391
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-YKIKPSIK 359
G +EA F+ + S ++P+ ++F+++L AC+ + + + + E Y ++
Sbjct: 392 GRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
+ ++ + G L++A ++ + S + + W ++++A +H
Sbjct: 452 --TALLSMYAKCGSLKDAHRVFEKI-SKQNVVAWNAMITAYVQH 492
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 189/377 (50%), Gaps = 37/377 (9%)
Query: 42 LVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL 101
+VF IK N ++ S++ A+ + ++ + +S IQ R TY +L + +
Sbjct: 67 VVFADIKDTQKA--NAVLNRLSKAGQFNEAMQV-LERVDSSHIQIYRQTYSALLQLCIKF 123
Query: 102 GLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM 161
DG +++ + K G++ D F+ NT+I MYA
Sbjct: 124 KNLGDGERIYNHIKKSGVQPDIFMRNTLINMYA--------------------------- 156
Query: 162 IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSE 221
KCG ++++FD M ++ SWN ++ GYV++ ++EA +L +M + ++KP +
Sbjct: 157 -----KCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDK 211
Query: 222 FTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
T VS+LNACA + +G ++N ++ ++ + V TA+I+M+ KCG A +VF+
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+P + L W SM+ GLA +G +A LF ++ ++PD ++F+++L ACNH + Q
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG 331
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
K M E I + ++ + G +E+A ++ + + + W ++++
Sbjct: 332 KKVHARMKEV-GWDTEIYVGTAILSMYTKCGSMEDALEVF-DLVKGRNVVSWTAMIAGFA 389
Query: 402 KHGNIEMAKQAAKQIIE 418
+HG I+ A ++IE
Sbjct: 390 QHGRIDEAFLFFNKMIE 406
>gi|357124715|ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 599
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/497 (34%), Positives = 280/497 (56%), Gaps = 15/497 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +LK+ H+ L++ GLA P R+LAF + YA + P+ ++N +
Sbjct: 14 ISELKQHHSQLVRLGLASRPEHVRRLLAFLARDPAGVPYAARLLAHHPDPHPALFNPLF- 72
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+S P + F+ ++++ P+ P T P L A + L
Sbjct: 73 ----ASLPPHHAAAFLALMLSLPLHPDHFTLPRLLPAAPLP------LAAQLHALLLKLN 122
Query: 121 FDQFIH--NTIIYMYANCGFLSEARLMFDEVDT--EFDVVAWNSMIIGLAKCGEIDESRR 176
F H N ++ Y G A +F + + DVV+W +M+ GL + G +D++R+
Sbjct: 123 FHSHAHSFNALLAAYLANGRADLASRLFGSCSSPGDLDVVSWTTMVGGLCRLGLVDDARK 182
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
LFD M RN +SWN+MISGYV+ +F +ALE+F +M+ I+ + F S + AC G
Sbjct: 183 LFDGMPERNLISWNAMISGYVKAGRFLDALEVFDQMRALGIEGNGFVAASAVVACTGAGV 242
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ +G +H ++ + ++ + TA++DMYCKCG E A VF +P KGL+ WN M+ G
Sbjct: 243 LARGREVHRWVEQSGITMDEKLATAVVDMYCKCGSVEEAWHVFKVLPTKGLTSWNCMIGG 302
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA++G +AI+LF ++ ++ PD ++ + VLTAC H+G V+ +YF + + Y I+P
Sbjct: 303 LAVHGRCKDAIELFHEMEREDVAPDDVTLVNVLTACAHTGMVSDGHNYFNYIVQRYGIEP 362
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++HY CMVD GRAGLL+EA+K+I MP +PD + G+L AC+ H ++++ + ++
Sbjct: 363 KMEHYGCMVDLFGRAGLLDEAKKVIDDMPMEPDIGVLGALFGACKIHRDLDLGEAIGWRV 422
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
IELD S YVL++NL A++ Q+ + + R LM E + KE G S+IE+DGEV EF G
Sbjct: 423 IELDPQNSGRYVLLANLLASAGQWVDVAKVRRLMDERNVSKEAGRSVIEIDGEVCEFQCG 482
Query: 477 GRLHPKAPEVYLLLNDL 493
H + E++ + D+
Sbjct: 483 SLCHAQEKEIFAAVKDM 499
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 180/530 (33%), Positives = 293/530 (55%), Gaps = 34/530 (6%)
Query: 5 KKIHAHLIKTGLAK-DPIAAS--RILAFCTSP---------------------------A 34
+KIH+ ++K GL P+A S + A C P +
Sbjct: 162 RKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQS 221
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G A F ++ ++ WN++I G+SQ A+++F ML ++P T S+
Sbjct: 222 GQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASI 281
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE-F 153
A A L G Q+H +++ E + N +I MYA G + ARL+ + T
Sbjct: 282 LSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL 341
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+++A+ S++ G K G + +R +F+K+ R+ V+W +MI GYV+N + +ALELFR M
Sbjct: 342 NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMV 401
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ +P+ +T+ ++L+ + L + G+ IH + V A+I MY K G
Sbjct: 402 NEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNIN 461
Query: 274 RALQVFNTVP--KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A +VF+ +P KK + W SM+ LA +G EAI LF + S +KPD+I+++ VL+A
Sbjct: 462 VAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSA 520
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H G V Q + Y+ +MTE ++I+P++ HY+CM+D GRAGLL+EA I SMP +PD I
Sbjct: 521 CTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNI 580
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
WGSLL++C+ H N ++AK AA++++ +D S Y+ ++N+Y+A ++E A + R LMK
Sbjct: 581 AWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMK 640
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ + KE G S I + EVH F +HP+ E+Y L+ ++ I++MG
Sbjct: 641 DRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMG 690
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 173/349 (49%), Gaps = 39/349 (11%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G +H +++K+GL ++ N ++ YA G L A +FDE+ + +WN++I G A
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLK-STFSWNTLISGYA 87
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
K G + SRRL +M + VSW ++I GY + F A+ +F +M + + PS+FT+ +
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP-------------- 272
+L++CA + G IH+F+V V T++++MY KCG P
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 273 -----------------ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG-LQ 314
E A F +P + + WNSM+ G + GY EA+ +FS L
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDY--FTLMTETYKIKPSIKHYSCMVDALGRAG 372
+LKPD + ++L+AC + K+N K + L ET + S + ++ ++G
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAET---ETSGAVGNALISMYAKSG 324
Query: 373 LLEEAEKLI-RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+E A ++ + S+ + I + SLL K GN++ A++ ++ + D
Sbjct: 325 GVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRD 373
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 12/230 (5%)
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
SEF +L ++ G +H ++ L ++ ++ Y K G A VF
Sbjct: 10 SEF-FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVF 68
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+ +P K WN+++ G A G + +L + D +S+ A++ N G +
Sbjct: 69 DEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDC----DPVSWTAIIVGYNQFGLFD 124
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL---IRSMPSDPDAIIWGSL 396
A F M + ++ PS S ++ + L+ K+ + + + SL
Sbjct: 125 NAIWMFAKMI-SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSL 183
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
L+ K G+ +AK ++ KN S L+S LY S QFE A +
Sbjct: 184 LNMYAKCGDPVIAKVVFDRMTV--KNISTWNALIS-LYMQSGQFELAASQ 230
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/491 (35%), Positives = 291/491 (59%), Gaps = 3/491 (0%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
++K+IH H + GL L G A +F ++ N+ +NT+I GF
Sbjct: 145 EVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGF 204
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++ + LF DM + ++P T L QLG + G +H ++ K +
Sbjct: 205 AKVGNILGILELFHDMR-SHGLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSN 263
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
++N ++ MY C L AR +FD E D V+WN++I G AK GE++ + LF+++
Sbjct: 264 LILYNALLDMYVKCNELKLARKVFDG-PMEKDTVSWNTIIAGYAKVGELELACDLFNQIP 322
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+R+ VSWNS+ISGY +N + LF M +N+KP + T+V+L++A A++GA+ QG W
Sbjct: 323 TRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRW 382
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH V ++ +A+IDMYCKCG ERA +FN +P+K ++ W +M+ G A +G+
Sbjct: 383 IHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGF 442
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
N+A++LFS +Q+ KP+ ++F++VL AC+HSG V++ F+ M + Y I+P ++HY
Sbjct: 443 GNKALELFSVMQAET-KPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYG 501
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C+VD L R+G L +A +I MP +P IWG++LSACR H N+E+A++A ++++L+
Sbjct: 502 CLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALMELLKLEPE 561
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+ GY+L+SN+YA ++ + R +M ++K GCS + VDG VH+F A + HP+
Sbjct: 562 KEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMVHDFTASNKQHPR 621
Query: 483 APEVYLLLNDL 493
++ +L+ L
Sbjct: 622 WMDICSILSFL 632
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 196/437 (44%), Gaps = 78/437 (17%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKK-PNLFIWNTIIRG 61
K+I H+++ L SR+L F S ++ A L+F PNL+I+NT+I G
Sbjct: 47 FKQILGHMMRNNLVGQTFPMSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIFNTMILG 106
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LE 120
F S+ A ++ ML + P R T+ L + + + Q+H + G L
Sbjct: 107 FPFSN--EKAFTIYRSML-QNGTYPDRQTFLYLLQTTKFVAEVK---QIHCHALVFGLLS 160
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
++++ N++I Y + G AR +FDE+ ++ +VV++N+MI+G AK G I
Sbjct: 161 KEEYLRNSLIKRYVDNGCFECARQLFDEM-SDRNVVSYNTMILGFAKVGNI--------- 210
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
LELF +M+ ++P +FTM+ LL C +LG + G
Sbjct: 211 ----------------------LGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLG 248
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKC------------------------------- 269
+ +H + + N I+ A++DMY KC
Sbjct: 249 KSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKV 308
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G E A +FN +P + + WNS++ G A NG LF+ + + N+KPD ++ + ++
Sbjct: 309 GELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNLI 368
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLEEAEKLIRSMPSD 387
+A G ++Q + L K+ I+ + S ++D + G +E A + +P +
Sbjct: 369 SAVAEMGALDQGRWIHGL---AVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIP-E 424
Query: 388 PDAIIWGSLLSACRKHG 404
D W ++++ HG
Sbjct: 425 KDVTTWTTMITGFAFHG 441
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 279/501 (55%), Gaps = 38/501 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+++H+ I+ GL D ++ A C S G + A +F QI N+F W +I G
Sbjct: 291 QQLHSQAIRHGLTLDRCVGCCLINMYAKC-SVDGSMCAARKIFDQILDHNVFSWTAMITG 349
Query: 62 FSQSST-PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ Q A+ LF M++T I P T+ S KA A L R G Q+ VK G
Sbjct: 350 YVQKGGYDEEALDLFRGMILTHVI-PNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFS 408
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N++I MYA + G ID++R+ FD
Sbjct: 409 SVNCVANSLISMYA--------------------------------RSGRIDDARKAFDI 436
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ +N +S+N++I Y +N+ +EALELF E+++Q + S FT SLL+ A +G I +G
Sbjct: 437 LFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKG 496
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
E IH ++ + +LN V A+I MY +CG E A QVF + + + W S++ G A +
Sbjct: 497 EQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKH 556
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ +A++LF + ++P+ +++IAVL+AC+H G VN+ +F M + + P ++H
Sbjct: 557 GFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEH 616
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+C+VD LGR+G L EA + I SMP DA++W + L ACR HGN+E+ K AAK IIE +
Sbjct: 617 YACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQE 676
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
++ Y+L+SNLYA+ +++E R MKE + KE GCS +EV+ +VH+F G H
Sbjct: 677 PHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSH 736
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
PKA E+Y L +L + I+++G
Sbjct: 737 PKAAEIYDELQNLSVKIKKLG 757
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 194/415 (46%), Gaps = 36/415 (8%)
Query: 7 IHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
I +IKTG L D ++ GD+ A+ VF ++ + N W +I Q
Sbjct: 190 IFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQF 249
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
AI LF+DM+ S +P R T + A A + L G QLH + ++ GL D+ +
Sbjct: 250 GYAGEAIDLFLDMIF-SGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCV 308
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+I MYA C VD G + +R++FD+++ N
Sbjct: 309 GCCLINMYAKC-----------SVD------------------GSMCAARKIFDQILDHN 339
Query: 186 TVSWNSMISGYVRNVKF-KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
SW +MI+GYV+ + +EAL+LFR M ++ P+ FT S L ACA L A+R GE +
Sbjct: 340 VFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF 399
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
V F V ++I MY + G + A + F+ + +K L +N+++ A N
Sbjct: 400 THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSE 459
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIKPSIKHYSC 363
EA++LF+ ++ + +F ++L+ G + + + + ++ K+ S+ +
Sbjct: 460 EALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSV--CNA 517
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
++ R G +E A ++ M D + I W S+++ KHG A + +++E
Sbjct: 518 LISMYSRCGNIESAFQVFEDM-EDRNVISWTSIITGFAKHGFATQALELFHKMLE 571
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 109/259 (42%), Gaps = 33/259 (12%)
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
++ +V P TY K + G +H ++ + L+ D N++I +Y+
Sbjct: 54 LEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSK 113
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
CG +A +F + + D+++W++M+ A
Sbjct: 114 CGQWEKATSIFRLMGSSRDLISWSAMVSCFAN---------------------------- 145
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV-TNCFEL 254
N+ F+ AL F +M E P+E+ + AC+ + G+ I F++ T +
Sbjct: 146 --NNMGFR-ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQS 202
Query: 255 NTIVVTAIIDMYCKC-GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL 313
+ V +IDM+ K G A +VF +P++ W M+ L GY EAI LF +
Sbjct: 203 DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDM 262
Query: 314 QSSNLKPDYISFIAVLTAC 332
S +PD + V++AC
Sbjct: 263 IFSGYEPDRFTLSGVISAC 281
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 5/211 (2%)
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
+ N + +A+ M Q P T L C + + G +H L + +L++
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
+ + ++I +Y KCG E+A +F + + L W++MV A N A+ F +
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL--GRAGL 373
+ P+ F A AC+ + V+ F + +T ++ + ++D GR L
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221
Query: 374 LEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ A K+ MP + +A+ W +++ + G
Sbjct: 222 V-SAFKVFEKMP-ERNAVTWTLMITRLMQFG 250
>gi|193806402|sp|Q56X05.2|PPR15_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06145; AltName: Full=Protein EMBRYO DEFECTIVE 1444
Length = 577
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 300/524 (57%), Gaps = 37/524 (7%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K L+ A +IKT L +D ++ + CTS ++ A TQ+++PN+F++N + +G
Sbjct: 42 KLLESALAAMIKTSLNQDCRLMNQFITACTS-FKRLDLAVSTMTQMQEPNVFVYNALFKG 100
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
F S P ++ L++ ML S + P TY SL KA + +R G L + K G F
Sbjct: 101 FVTCSHPIRSLELYVRMLRDS-VSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGF 157
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM-------------------- 161
I T+I Y+ G + EAR +FDE+ E D +AW +M
Sbjct: 158 HVKIQTTLIDFYSATGRIREARKVFDEM-PERDDIAWTTMVSAYRRVLDMDSANSLANQM 216
Query: 162 -----------IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
I G G ++++ LF++M ++ +SW +MI GY +N +++EA+ +F
Sbjct: 217 SEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFY 276
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M E+ I P E TM ++++ACA LG + G+ +H + + N F L+ + +A++DMY KCG
Sbjct: 277 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 336
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
ERAL VF +PKK L CWNS++ GLA +G+ EA+K+F+ ++ ++KP+ ++F++V T
Sbjct: 337 SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 396
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC H+G V++ + + M + Y I +++HY MV +AGL+ EA +LI +M +P+A
Sbjct: 397 ACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNA 456
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
+IWG+LL CR H N+ +A+ A +++ L+ S Y L+ ++YA ++ + E R M
Sbjct: 457 VIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRM 516
Query: 451 KEVKIEKE-PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+E+ IEK PG S I +D H F A + H + EV LLL+++
Sbjct: 517 RELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 560
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 241/393 (61%)
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
QLH +V+ G D +++ Y +CG ++ AR +FDE DVV+WN MI G K
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKS 151
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G++ +R LFD M RN VSW +I Y + + +EA+E+FR MQ + I+P ++S+L
Sbjct: 152 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 211
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+AC LG + GEW+H F++ ++ AIIDMY KCG ++AL+VF + +K +
Sbjct: 212 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 271
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
W +M+ G A++G +EA++LF ++ N+ P+ I+F+AVL+ C+H G + + YF M
Sbjct: 272 TWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 331
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
YKIKP ++HY CM+D LGRAG L EA LI+ MP +A IWG+LL+A R HG+ E+
Sbjct: 332 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTEL 391
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
+QA +IEL+ + S Y+L+SN+YA +++ E R+ M++ + PG S I+VDG
Sbjct: 392 GEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDG 451
Query: 469 EVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
VHEF + HP ++ +L + I+ +G
Sbjct: 452 MVHEFTSRDGSHPSLHKIREVLCAINSNIKSVG 484
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 68/330 (20%)
Query: 6 KIHAHLIKTGLAKDPIA-ASRILAFCTS------------------------------PA 34
++H+ L++ G A DP A AS + A+C+ +
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKS 151
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+ A +F + N+ W +I ++Q P AI +F M V I+P + S+
Sbjct: 152 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEG-IEPDGVALLSV 210
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A LG+ G +H V+++GL + + N II MY CG + +A +F+ ++ +
Sbjct: 211 LSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQK-S 269
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+V W +MI G A G EA+ELFR M++
Sbjct: 270 IVTWTTMIAGFALHG-------------------------------LGSEAVELFRRMEK 298
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCP 272
+N+ P++ T +++L+ C+ +G G W +V+ +++ V +ID+ + GC
Sbjct: 299 ENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQ-YKIKPRVEHYGCMIDLLGRAGCL 357
Query: 273 ERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
A + +P K + W +++ +G
Sbjct: 358 MEARGLIQDMPFKANAAIWGALLAAARTHG 387
>gi|359487598|ref|XP_002278925.2| PREDICTED: pentatricopeptide repeat-containing protein At3g56550
[Vitis vinifera]
Length = 603
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 276/496 (55%), Gaps = 35/496 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ L KIHAH++ G +P + ++L FC S +G + YA LVF +I P WN++I
Sbjct: 36 MRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTPAWNSMI 95
Query: 60 RGFSQSSTPRN--AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
RGFSQS +P AI+ + ML S +P T+ L KA + ++HG +++
Sbjct: 96 RGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRF 155
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G +DQ DVV ++I A G I+ + ++
Sbjct: 156 G--YDQ------------------------------DVVLCTNLIRSYAGNGLIETAHKV 183
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
F++M +R+ VSWNSMIS Y + +EAL+++ +M+ N+ FT+VSLL++CA +GA+
Sbjct: 184 FEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGAL 243
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G +H F N V A+IDMY KCG AL +FN++PK+ + WNSM+ G
Sbjct: 244 HMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGY 303
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
++G +EAI F + + ++P+ I+F+ +L C+H G V + YF +M+ + +KP
Sbjct: 304 GVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPG 363
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
IKHY CMVD GRAG L+EA ++IRS PS D ++W +LL +C+ H N+E+ + A + ++
Sbjct: 364 IKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLV 423
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+L + VL+S +YA + + R L++ I+ PG S IEV +VH FV
Sbjct: 424 QLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDD 483
Query: 478 RLHPKAPEVYLLLNDL 493
+ HP + E+Y L ++
Sbjct: 484 KSHPDSREIYRKLEEV 499
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 298/536 (55%), Gaps = 73/536 (13%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILA--------------FCTSPAGDI-NYAYLV--- 43
K+ ++IH H++K G D + +++ F SP D+ +Y L+
Sbjct: 151 KEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGY 210
Query: 44 ------------FTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
F +I ++ WN +I G++++ + A+ LF +M+ T+ I+P T
Sbjct: 211 ASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTN-IRPDESTM 269
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
++ A AQ G G Q+H + G + I N+++ +Y+
Sbjct: 270 VTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYS----------------- 312
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
KCGE++ + LF+ ++ ++ +SWN++I GY +KEAL LF+E
Sbjct: 313 ---------------KCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQE 357
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL------VTNCFELNTIVVTAIIDM 265
M +P++ TM+S+L ACA LGAI G WIH ++ TN L T ++IDM
Sbjct: 358 MLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRT----SLIDM 413
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y KCG E A QVFN++ K LS WN+M+FG AM+G + A +FS ++ ++PD I+F
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITF 473
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ +L+AC+ SG ++ + F MT+ YKI P ++HY CM+D LG +GL +EAE++I +M
Sbjct: 474 VGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNME 533
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+PD +IW SLL AC+ GN+E+ + A+ +I+++ YVL+SN+YA + ++ E +
Sbjct: 534 MEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAK 593
Query: 446 ERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R L+ + ++K PGCS IE+D VHEF+ G + HP+ E+Y +L ++ +L+++ G
Sbjct: 594 IRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%), Gaps = 33/254 (12%)
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+ + N + WN+M G+ + AL+L+ M + P+ +T LL +CAK A
Sbjct: 90 VFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKA 149
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG-----------CPER----------- 274
++G+ IH ++ ++L+ V T++I +Y + G P R
Sbjct: 150 FKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKG 209
Query: 275 ---------ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
A ++F+ +P K + WN+M+ G A G EA++LF + +N++PD +
Sbjct: 210 YASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTM 269
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ V++AC SG + + + + + + ++K + ++D + G LE A L +
Sbjct: 270 VTVVSACAQSGSIELGRQVHSWI-DDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLL 328
Query: 386 SDPDAIIWGSLLSA 399
D I W +L+
Sbjct: 329 YK-DVISWNTLIGG 341
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/510 (33%), Positives = 291/510 (57%), Gaps = 16/510 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K ++ +++ G + IL G ++ A F +I+ ++F+WN ++ G++
Sbjct: 131 KDVYDYMLSIGFEGNSCVKGSILDMFIK-CGRMDIARRFFEEIEFKDVFMWNIMVSGYTS 189
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QGLEFDQ 123
+ A+ +F M V ++P +T S A L L R G ++HG +K + L+ D
Sbjct: 190 KGEFKKALNVFRKM-VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDL 248
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM--IIGLAKCGEIDESRRLFDKM 181
+ N+++ YA C + AR F + + D+V+WN+M + G + G+ + F +M
Sbjct: 249 LVGNSLVDYYAKCRSVEVARRKFGMI-KQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRM 307
Query: 182 ----------VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
+R+ V WNS+IS ++ + AL+L REM N++ + TMVS L AC
Sbjct: 308 HIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPAC 367
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
+KL A+RQG+ IH F++ + ++ ++IDMY +CG +++ ++F+ +P++ L WN
Sbjct: 368 SKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWN 427
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
M+ M+G+ +A+ LF ++ LKP++I+F +L+AC+HSG + + YF +M
Sbjct: 428 VMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 487
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
Y + P+++ Y+CMVD L RAG E + I MP +P+A +WGSLL ACR H N ++A+
Sbjct: 488 YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEY 547
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
AA+ + EL+ S YVLM+N+Y+A+ ++E+A + R LMKE + K PGCS IEV ++H
Sbjct: 548 AARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLH 607
Query: 472 EFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
FV G HP ++ + L I+E+G
Sbjct: 608 SFVVGDTSHPLMEQISAKMESLYFDIKEIG 637
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 187/444 (42%), Gaps = 82/444 (18%)
Query: 6 KIHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++HA L+ G+ SR+L +C + G + A +F ++ + N+F W I+ +
Sbjct: 31 QVHAQLVVNGVDVCEFLGSRLLEVYCQT--GCVEDARRMFDKMSERNVFSWTAIMEMYCG 88
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
I LF ++V ++P +P +FKA ++L R G ++ ++ G E +
Sbjct: 89 LGDYEETIKLFY-LMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSC 147
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ +I+ M+ CG + AR F+E++ + DV WN M+ G GE
Sbjct: 148 VKGSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSGYTSKGE-------------- 192
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
FK+AL +FR+M + +KP+ T+ S ++AC L +R G IH
Sbjct: 193 -----------------FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 235
Query: 245 NFLV-TNCFELNTIVVTAIIDMYCKCGCPERALQ-------------------------- 277
+ + + + +V +++D Y KC E A +
Sbjct: 236 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYG 295
Query: 278 -----------------VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
VF+ + + + WNS++ A +G A+ L + SN++
Sbjct: 296 DGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEV 355
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
+ ++ ++ L AC+ + Q K+ + + + ++D GR G ++++ ++
Sbjct: 356 NTVTMVSALPACSKLAALRQGKEIHQFIIRC-GLDTCNFILNSLIDMYGRCGSIQKSRRI 414
Query: 381 IRSMPSDPDAIIWGSLLSACRKHG 404
MP D + W ++S HG
Sbjct: 415 FDLMPQ-RDLVSWNVMISVYGMHG 437
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 144/308 (46%), Gaps = 33/308 (10%)
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
Y S+ + +L R G Q+H ++V G++ +F+ + ++ +Y
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYC---------------- 56
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
+ G ++++RR+FDKM RN SW +++ Y ++E ++LF
Sbjct: 57 ----------------QTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFY 100
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
M + ++P F + AC++L R G+ +++++++ FE N+ V +I+DM+ KCG
Sbjct: 101 LMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCG 160
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
+ A + F + K + WN MV G G +A+ +F + +KP+ I+ + ++
Sbjct: 161 RMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVS 220
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC + + ++ + ++ + + +VD + +E A + M D
Sbjct: 221 ACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDL 279
Query: 391 IIWGSLLS 398
+ W ++L+
Sbjct: 280 VSWNAMLA 287
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
S+L C KL +R G +H LV N ++ + + ++++YC+ GC E A ++F+ + ++
Sbjct: 15 SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 74
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
+ W +++ G E IKLF + + ++PD+ F V AC+ KD +
Sbjct: 75 NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 134
Query: 346 TLMTETYKIKPSIKHYSC----MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
Y + + SC ++D + G ++ A + + D +W ++S
Sbjct: 135 -----DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEF-KDVFMWNIMVSGYT 188
Query: 402 KHGNIEMAKQAAKQII 417
G + A ++++
Sbjct: 189 SKGEFKKALNVFRKMV 204
>gi|296089864|emb|CBI39683.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 276/496 (55%), Gaps = 35/496 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ L KIHAH++ G +P + ++L FC S +G + YA LVF +I P WN++I
Sbjct: 18 MRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTPAWNSMI 77
Query: 60 RGFSQSSTPRN--AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
RGFSQS +P AI+ + ML S +P T+ L KA + ++HG +++
Sbjct: 78 RGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRF 137
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G +DQ DVV ++I A G I+ + ++
Sbjct: 138 G--YDQ------------------------------DVVLCTNLIRSYAGNGLIETAHKV 165
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
F++M +R+ VSWNSMIS Y + +EAL+++ +M+ N+ FT+VSLL++CA +GA+
Sbjct: 166 FEEMPARDLVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGAL 225
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G +H F N V A+IDMY KCG AL +FN++PK+ + WNSM+ G
Sbjct: 226 HMGVQMHRFAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGY 285
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
++G +EAI F + + ++P+ I+F+ +L C+H G V + YF +M+ + +KP
Sbjct: 286 GVHGRGDEAITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPG 345
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
IKHY CMVD GRAG L+EA ++IRS PS D ++W +LL +C+ H N+E+ + A + ++
Sbjct: 346 IKHYGCMVDLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLV 405
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+L + VL+S +YA + + R L++ I+ PG S IEV +VH FV
Sbjct: 406 QLGSLGAGDCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDD 465
Query: 478 RLHPKAPEVYLLLNDL 493
+ HP + E+Y L ++
Sbjct: 466 KSHPDSREIYRKLEEV 481
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 267/459 (58%), Gaps = 43/459 (9%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GDI A +F +I ++ WN +I G++++ + A+ LF +M+ + ++P TY ++
Sbjct: 144 GDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMN-VRPDESTYVTV 202
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A A G G Q+H V G + + I N +I +Y+
Sbjct: 203 LSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYS-------------------- 242
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
KCGE++ + LF + ++ +SWN++I GY +KEAL LF+EM
Sbjct: 243 ------------KCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 290
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL------VTNCFELNTIVVTAIIDMYCK 268
P++ TM+S+L ACA LGAI G WIH ++ VTN L T ++IDMY K
Sbjct: 291 SGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRT----SLIDMYAK 346
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG E A QVFN++ K LS WN+M+FG AM+G + + LFS ++ ++PD I+F+ +
Sbjct: 347 CGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGL 406
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC+HSG ++ + F MT+ YK+ P ++HY CM+D LG +GL +EAE++I +M +P
Sbjct: 407 LSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEP 466
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D +IW SLL AC+ HGN+E+A+ A+ +I+++ Y+L+SN+YA++ ++E+ R
Sbjct: 467 DGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRA 526
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
L+ ++K PGCS IEVD V EFV G + HP+ E+Y
Sbjct: 527 LLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIY 565
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 33/254 (12%)
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+ + N + WN+MI G+ + +L L+ M + P+ +T LL +CAK
Sbjct: 20 VFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKT 79
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK--------------------------CG 270
+G+ IH ++ F+L+ V T++I MY + G
Sbjct: 80 FTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITG 139
Query: 271 CPER-----ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
R A ++F+ +P K + WN+M+ G A G EA++LF + N++PD ++
Sbjct: 140 YASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTY 199
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ VL+AC HSG + + + + + + ++K + ++D + G +E A L + +
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWV-DDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGL- 257
Query: 386 SDPDAIIWGSLLSA 399
S D I W +L+
Sbjct: 258 SYKDVISWNTLIGG 271
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 174/494 (35%), Positives = 291/494 (58%), Gaps = 36/494 (7%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPA-GDINYAYLVFTQIKKPNLFIWNTII 59
++L +I A+ IK+ +D ++++ FCT SP ++YA +F + +P++ I+N+I
Sbjct: 45 RELMQIQAYAIKSH-QEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNSIA 103
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S+S+ P LF+++L + P T+PSL KA A +G QLH +K G+
Sbjct: 104 RGYSRSTNPLEVFNLFVEIL-EDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGV 162
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ + ++ T+I MY +C ++D +R +FD
Sbjct: 163 DDNVYVCPTLINMYT--------------------------------ECEDVDAARCVFD 190
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
++V V +N+MI+GY R + EAL LFREMQ +N+KP+E T++S+L++CA LG++
Sbjct: 191 RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDL 250
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+WIH + + F V TA+IDM+ KCG + A+ +F + K W++M+ A
Sbjct: 251 GKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYAN 310
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G ++ +F ++S N++PD I+F+ +L AC+H+G V + ++YF+ M + I PSIK
Sbjct: 311 HGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIK 370
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY MVD LGRAG LE+A + I +P P ++W LL+AC H N+E+A++ +++I+EL
Sbjct: 371 HYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLELAEKVSERILEL 430
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D + YV++SNLYA + ++E R +MK+ K K PGCS IEV+ VHEF +G +
Sbjct: 431 DDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGV 490
Query: 480 HPKAPEVYLLLNDL 493
+++ L+++
Sbjct: 491 KSATTKLHRALDEM 504
>gi|334182333|ref|NP_172105.4| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
gi|8810477|gb|AAF80138.1|AC024174_20 Contains similarity to an unknown protein T5J8.5 gi|4263522 from
Arabidopsis thaliana BAC T5J8 gb|AC004044 and contains
multiple PPR PF|01535 repeats. ESTs gb|AV565358,
gb|AV558710, gb|AV524184 come from this gene [Arabidopsis
thaliana]
gi|332189826|gb|AEE27947.1| uncharacterized basic helix-loop-helix protein [Arabidopsis thaliana]
Length = 1322
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 300/524 (57%), Gaps = 37/524 (7%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K L+ A +IKT L +D ++ + CTS ++ A TQ+++PN+F++N + +G
Sbjct: 787 KLLESALAAMIKTSLNQDCRLMNQFITACTS-FKRLDLAVSTMTQMQEPNVFVYNALFKG 845
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
F S P ++ L++ ML S + P TY SL KA + +R G L + K G F
Sbjct: 846 FVTCSHPIRSLELYVRMLRDS-VSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGF 902
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM-------------------- 161
I T+I Y+ G + EAR +FDE+ E D +AW +M
Sbjct: 903 HVKIQTTLIDFYSATGRIREARKVFDEM-PERDDIAWTTMVSAYRRVLDMDSANSLANQM 961
Query: 162 -----------IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
I G G ++++ LF++M ++ +SW +MI GY +N +++EA+ +F
Sbjct: 962 SEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFY 1021
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M E+ I P E TM ++++ACA LG + G+ +H + + N F L+ + +A++DMY KCG
Sbjct: 1022 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 1081
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
ERAL VF +PKK L CWNS++ GLA +G+ EA+K+F+ ++ ++KP+ ++F++V T
Sbjct: 1082 SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 1141
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC H+G V++ + + M + Y I +++HY MV +AGL+ EA +LI +M +P+A
Sbjct: 1142 ACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNA 1201
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
+IWG+LL CR H N+ +A+ A +++ L+ S Y L+ ++YA ++ + E R M
Sbjct: 1202 VIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRM 1261
Query: 451 KEVKIEKE-PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+E+ IEK PG S I +D H F A + H + EV LLL+++
Sbjct: 1262 RELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 1305
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/538 (33%), Positives = 285/538 (52%), Gaps = 42/538 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL------------------------------AFCTSPA 34
+ +HA +GLA+DP AS +L A + A
Sbjct: 37 RALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHA 96
Query: 35 --GDINYAYLVFTQIKK-----PNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQ 87
GD A+ + ++++ PN+ WN ++ G ++S R+A++ M ++P
Sbjct: 97 ARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPD 156
Query: 88 RLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFD 147
A +GL G QLHG VK G D + +I MY CG +E +FD
Sbjct: 157 ATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFD 216
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR----NTVSWNSMISGYVRNVKFK 203
E + DV + N++I GL++ ++ E+ RLF + V R N VSW S+++ V+N K
Sbjct: 217 E-SSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDL 275
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
EA+E FREMQ Q +P+ T+ +L A A + A+ G H F + F + V +A++
Sbjct: 276 EAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALV 335
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY KCG + A +F+T+ + + WN+M+ G AM G A+ +F + KPD +
Sbjct: 336 DMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMV 395
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F +L AC +G + + YF M Y + P ++HY+CMV LGRAG L+EA LI
Sbjct: 396 TFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISD 455
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
MP +PDA IWGSLL +CR HGN+++A+ AA+++ L+ + YVL+SN+YA+ ++
Sbjct: 456 MPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRV 515
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R +MK+V ++KE GCS IE+ +VH +AG HP + +N L + ++++G
Sbjct: 516 NRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLG 573
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 154/314 (49%), Gaps = 13/314 (4%)
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
P ++ L V+ P P L P+ FK+ L LAR LH GL D F+ +
Sbjct: 2 PHSSSLHHFLRHVSFPPDPHLL--PTAFKSCPTLPLAR---ALHAVAEVSGLARDPFVAS 56
Query: 128 TIIYMYANCGFLSEARLMFDEVD-TEFDVVAWNSMIIGLAKCGEIDESRRLFDKM----- 181
++++ Y G AR +FD + + VV W++++ A G+ + + RL ++M
Sbjct: 57 SLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGG 116
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL-LNACAKLGAIRQG 240
V N ++WN ++SG R+ + ++A+ M + + + T VS L+A +G + G
Sbjct: 117 VEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVG 176
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H + V + VVTA+IDMY KCG ++VF+ ++ N+++ GL+ N
Sbjct: 177 QQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRN 236
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
EA++LF ++ + +S+ +++ C +GK +A ++F M + +P+
Sbjct: 237 AQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREM-QAQGTEPNSVT 295
Query: 361 YSCMVDALGRAGLL 374
C++ A L
Sbjct: 296 IPCVLPAFANVAAL 309
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 195/566 (34%), Positives = 301/566 (53%), Gaps = 74/566 (13%)
Query: 6 KIHAHLIKTG-LAKDPIAASRIL--AFCTSPAGDINYAYLVFTQIKKP---NLFIWNTII 59
+ HA L+ +G LA P+ S +L A + P G A VF ++ +P + F WNT I
Sbjct: 28 QCHALLLTSGHLAASPLRLSNLLLLAIASVP-GAAPLADAVFARLPEPAARDPFPWNTAI 86
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R PR A+L F M + ++P T+P++ KA R G +H V++GL
Sbjct: 87 R-LHAPGRPRAALLYFARMR-SCGVRPDAYTFPAVLKACGCAPGCRAGLLVHAEAVRRGL 144
Query: 120 EFDQFIHNTIIYM---------------------------------YANCGFLSEARLMF 146
D F N +I Y CG + A+ +F
Sbjct: 145 GADLFTVNALISFYCRILDCISGRKVFDEAGGVSRDLVSWNSMVAGYVGCGEMGLAQELF 204
Query: 147 DE-----------------------VD---------TEFDVVAWNSMIIGLAKCGEIDES 174
DE VD TE D+V WNSMI G A+ G +DE+
Sbjct: 205 DEMPQRDAFSWGALIDGYGKQGGAGVDRARELFDQMTERDLVCWNSMIDGYARHGRMDEA 264
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R LF++M RN +SW+ +I G+VR + KEALE F+ M I+P V ++ACA+L
Sbjct: 265 RSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVAAVGAVSACAQL 324
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA+ QG W+H++L + +V TA+IDMY KCG + A+ +F ++P++ + WN M+
Sbjct: 325 GALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAMLIFESMPERSVVTWNVMI 384
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GL +GY +A+ LF +++ + D +S +A+LTAC H+G V++ + F M + + I
Sbjct: 385 VGLGTHGYGLDAVMLFHRMEAERVAVDDLSLLAMLTACTHAGLVSEGLEIFHRMKKDFGI 444
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P ++HY +VD LGRAG L++A I +MP +P +WGSLL+ACR H +E+A+ + +
Sbjct: 445 DPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAACRSHSCVELAELSVE 504
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
++ L ++S YVL+SN+YA + + + R LM + + K+ G S+IEVDGE+HEFV
Sbjct: 505 RLANLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEFV 564
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEM 500
GG H E+YL+L +L ++ +
Sbjct: 565 NGGGSHLCTDEIYLMLWNLSKMVASI 590
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 264/433 (60%), Gaps = 5/433 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTS-PIQPQRLTYPS 93
G ++ A VF +++ ++F W +I F ++ A+ LF DM P+ +
Sbjct: 214 GMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMV--C 271
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ A A+L + R+G HG + GL + N +I+MY++ + AR +FD
Sbjct: 272 VVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQC-L 330
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
D +WNSMI G K G + +++ LF M ++ VSW +MISG V+N + EAL +F MQ
Sbjct: 331 DQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQ 390
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
Q IKP E T+VS+++AC + ++ QG+ +H ++ + + + I+ T++IDMY KCGC E
Sbjct: 391 AQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLE 450
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL-KPDYISFIAVLTAC 332
AL+VF+T+ ++G CWN+++ GLAMNG +++ +FS ++SS+ P+ I+F VL+AC
Sbjct: 451 SALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSAC 510
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H+G V + + +F LM Y I P+I+HY CMVD LGRAG ++EAE LI SMP PD
Sbjct: 511 RHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPA 570
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
WG+LL +C KHG+ E+ ++ ++++ LD + + ++SN+YA+ ++ + R MK+
Sbjct: 571 WGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQ 630
Query: 453 VKIEKEPGCSLIE 465
+ K PG S++E
Sbjct: 631 WHVPKIPGSSVVE 643
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 211/510 (41%), Gaps = 106/510 (20%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSP---AGDINYAYLVFTQIKKPNLFIWNTI 58
+ L +IHA + +GL D AASR++ F TS +++ + + +PN F N +
Sbjct: 18 RHLLQIHAQFVASGLLADAFAASRLILFTTSTRLLPLPFHHSLRLLHVVHRPNAFSCNMV 77
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
++ + P + L+ M P T+ L A A +G Q+H V+ G
Sbjct: 78 LKAAREHGLPHLCLPLYASM----SAAPDCYTHTILAAACATRRAIEEGRQVHCHAVRHG 133
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN------------------- 159
+ ++ N ++ MY+ CG L +AR +FD +D V+WN
Sbjct: 134 FGRNLYLANALMSMYSACGCLGDARKVFD-AGPVWDAVSWNTILAAYVQAEDVDQAVGVF 192
Query: 160 ------------SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
SM+ + G +DE+R++FD + ++ +W +MIS + RN KF EAL
Sbjct: 193 ARMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALA 252
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
LF +M+ + E MV ++ ACA+L R GE H V A+I MY
Sbjct: 253 LFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYS 312
Query: 268 -------------------------------KCGCPERALQVFNTVPKKGLSCWNSMVFG 296
K G + A ++F +P K W +M+ G
Sbjct: 313 SFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISG 372
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
N +EA+ +F+ +Q+ +KPD ++ ++V++AC + + Q K + E ++
Sbjct: 373 CVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIRE-HQYTI 431
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSM-------------------------------- 384
++ + ++D + G LE A ++ +M
Sbjct: 432 TVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEME 491
Query: 385 ---PSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ P+ I + +LSACR G +E +
Sbjct: 492 SSSTATPNEITFTGVLSACRHAGLVEEGQH 521
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/470 (34%), Positives = 277/470 (58%), Gaps = 33/470 (7%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
SP G + YA+ +F+ PNLF+WNTIIRG+S S +P +AI L+ DM + I P T+
Sbjct: 12 SPHGHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCG-ISPNSYTF 70
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
+ A +L +G +LH ++VK GL+F+ + N +I +YA
Sbjct: 71 GFVLNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYA----------------- 113
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
CG +D + +FD+M ++ SW++M+SGY +N + E L+L RE
Sbjct: 114 ---------------ACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLRE 158
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ +N+ FT+ S++ C LG + G+W+H+++ +++ ++ TA++ MY KCG
Sbjct: 159 MQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGS 218
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ AL+VF + ++ ++ W+ M+ G A++G++ +A++LF ++ S + P+ ++F +VL+A
Sbjct: 219 LDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKIIPNCVTFTSVLSA 278
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
+HSG V + F M YKI P IKHY CMVD RAG++ A K I++MP +P+ +
Sbjct: 279 YSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKFIQTMPIEPNVV 338
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+W +LL AC+ HG + + +++I++LD + YV +SN+YA+ ++ + R LMK
Sbjct: 339 LWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGRWSSVCQVRSLMK 398
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
E +K+ G S IE++ VH+F+ G HPK ++Y +L+ + ++++G
Sbjct: 399 EKAPKKQHGWSSIEINFMVHKFIMGEESHPKREKIYGMLHQMARKLKQVG 448
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 272/462 (58%), Gaps = 10/462 (2%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A F +K ++ WNTII G++Q+ A LF + SP+ T+ ++ Y
Sbjct: 233 ARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDE----SPVHDV-FTWTAMVSGYI 287
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
Q + + +L R+ E ++ N ++ Y + A+ +FD + +V WN
Sbjct: 288 QNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCR-NVSTWN 342
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
+MI G A+CG+I E++ LFDKM R+ VSW +MI+GY ++ EAL LF M+ + +
Sbjct: 343 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRL 402
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
+ + S L+ CA + A+ G+ +H LV +E V A++ MYCKCG E A +F
Sbjct: 403 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 462
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+ K + WN+M+ G + +G+ EA++ F ++ LKPD + +AVL+AC+H+G V+
Sbjct: 463 KEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 522
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ + YF MT+ Y ++P+ +HY+CMVD LGRAGLLEEA L+++MP +PDA IWG+LL A
Sbjct: 523 KGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGA 582
Query: 400 CRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP 459
R HGN E+A+ AA +I ++ S YVL+SNLYA+S ++ + + R+ M++ ++K P
Sbjct: 583 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 642
Query: 460 GCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G S IE+ + H F G HP+ E++ L DL L +++ G
Sbjct: 643 GYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAG 684
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 134/541 (24%), Positives = 228/541 (42%), Gaps = 110/541 (20%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYP 92
G+ A ++F ++ + +L WN +I+G+ ++ A LF M P+R ++
Sbjct: 104 GEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERM-------PERDVCSWN 156
Query: 93 SLFKAYAQLGLARDGAQLHGRV-----VKQGLEFDQFIHNTII--------------YMY 133
++ YAQ G D ++ R+ V ++ N+ + +
Sbjct: 157 TILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVS 216
Query: 134 ANC---GFLS-----EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
NC GF+ EAR FD + DVV+WN++I G A+ GEIDE+R+LFD+ +
Sbjct: 217 WNCLLGGFVKKKKIVEARQFFDSMKVR-DVVSWNTIITGYAQNGEIDEARQLFDESPVHD 275
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
+W +M+SGY++N +EA ELF M E+N ++ A L QGE +
Sbjct: 276 VFTWTAMVSGYIQNRMVEEARELFDRMPERN----------EVSWNAMLAGYVQGERVEM 325
Query: 246 ----FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
F V C ++T +I Y +CG A +F+ +PK+ W +M+ G + +G
Sbjct: 326 AKELFDVMPCRNVSTW--NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG 383
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACN---------------------------- 333
+ EA++LF ++ + + SF + L+ C
Sbjct: 384 HSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN 443
Query: 334 -------HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
G + +A D F M I ++ M+ R G EEA + SM
Sbjct: 444 ALLLMYCKCGSIEEANDLFKEMA-----GKDIVSWNTMIAGYSRHGFGEEALRFFESMKR 498
Query: 387 D---PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD--KNESCGYVLMSNLYAASYQFE 441
+ PD ++LSAC G ++ +Q + + + S Y M +L + E
Sbjct: 499 EGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLE 558
Query: 442 EAMEERLLMKEVKIEKEP-------GCSLIEVDGEVHEFVAGG--RLHPKAPEVYLLLND 492
EA LMK + E + G S + + E+ E A + P+ +Y+LL++
Sbjct: 559 EAHN---LMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSN 615
Query: 493 L 493
L
Sbjct: 616 L 616
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 165/358 (46%), Gaps = 42/358 (11%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG---LARDGAQLH 111
WN I + ++ A+ +F M S + +Y ++ Y + G LAR
Sbjct: 62 WNVAISSYMRTGRCSEALRVFKRMPRWSSV-----SYNAMISGYLRNGEFELAR------ 110
Query: 112 GRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
+ + E D N +I Y L +AR +F+ + E DV +WN+++ G A+ G +
Sbjct: 111 -MLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERM-PERDVCSWNTILSGYAQNGCV 168
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS---LL 228
D++RR+FD+M +N VSWN+++S YV+N K +EA LF + + +VS LL
Sbjct: 169 DDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRE-------NWALVSWNCLL 221
Query: 229 NACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
K I + ++ + V + NTI+ Y + G + A Q+F+ P +
Sbjct: 222 GGFVKKKKIVEARQFFDSMKVRDVVSWNTIITG-----YAQNGEIDEARQLFDESPVHDV 276
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
W +MV G N EA +LF + N +S+ A+L +V AK+ F +
Sbjct: 277 FTWTAMVSGYIQNRMVEEARELFDRMPERN----EVSWNAMLAGYVQGERVEMAKELFDV 332
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
M ++ ++ M+ + G + EA+ L MP D + W ++++ + G+
Sbjct: 333 MP-----CRNVSTWNTMITGYAQCGKISEAKNLFDKMPK-RDPVSWAAMIAGYSQSGH 384
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 128/268 (47%), Gaps = 18/268 (6%)
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
D+ WN I + G E+ R+F +M ++VS+N+MISGY+RN +F+ A LF EM
Sbjct: 58 DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMP 117
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
E+++ S M+ LG R+ L E + I+ Y + GC +
Sbjct: 118 ERDL-VSWNVMIKGYVRNRNLGKARE-------LFERMPERDVCSWNTILSGYAQNGCVD 169
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A +VF+ +P+K WN+++ N EA LF ++ L +S+ +L
Sbjct: 170 DARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWAL----VSWNCLLGGFV 225
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
K+ +A+ +F M K++ + ++ ++ + G ++EA +L P D W
Sbjct: 226 KKKKIVEARQFFDSM----KVRDVVS-WNTIITGYAQNGEIDEARQLFDESPVH-DVFTW 279
Query: 394 GSLLSACRKHGNIEMAKQAAKQIIELDK 421
+++S ++ +E A++ ++ E ++
Sbjct: 280 TAMVSGYIQNRMVEEARELFDRMPERNE 307
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 240/393 (61%)
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
QLH +V+ G D +++ Y +CG ++ AR +FDE DVV+WN MI G K
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKS 155
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G++ +R LFD M RN VSW +I Y + + +EA+E+FR MQ + I+P ++S+L
Sbjct: 156 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 215
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+AC LG + GEW+H F++ ++ AIIDMY KCG ++AL+VF + +K +
Sbjct: 216 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 275
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
W +M+ G A++G EA++LF ++ N+ P+ I+F+AVL+ C+H G + + YF M
Sbjct: 276 TWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTM 335
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
YKIKP ++HY CM+D LGRAG L EA LI+ MP +A IWG+LL+A R HG+ E+
Sbjct: 336 VSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTEL 395
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
+QA +IEL+ + S Y+L+SN+YA +++ E R+ M++ + PG S I+VDG
Sbjct: 396 GEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSIDVDG 455
Query: 469 EVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
VHEF + HP ++ +L + I+ +G
Sbjct: 456 MVHEFTSRDGSHPSLHKIREVLCAINSNIKSVG 488
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 68/330 (20%)
Query: 6 KIHAHLIKTGLAKDPIA-ASRILAFCTS------------------------------PA 34
++H+ L++ G A DP A AS + A+C+ +
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKS 155
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+ A +F + N+ W +I ++Q P AI +F M V I+P + S+
Sbjct: 156 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEG-IEPDGVALLSV 214
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A LG+ G +H V+++GL + + N II MY CG + +A +F+ ++ +
Sbjct: 215 LSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQK-S 273
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+V W +MI G A G EA+ELFR M++
Sbjct: 274 IVTWTTMIAGFALHG-------------------------------LGLEAVELFRRMEK 302
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCP 272
+N+ P++ T +++L+ C+ +G G W +V+ +++ V +ID+ + GC
Sbjct: 303 ENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQ-YKIKPRVEHYGCMIDLLGRAGCL 361
Query: 273 ERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
A + +P K + W +++ +G
Sbjct: 362 MEARGLIQDMPFKANAAIWGALLAAARTHG 391
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 266/475 (56%), Gaps = 10/475 (2%)
Query: 35 GDINYAYLVFTQIK----KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLT 90
GD A+ + +++ +PN+ WN ++ G ++S R+A+L + M P
Sbjct: 100 GDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMH-GEGFLPDATG 158
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
A +G G QLHG VVK G D + +I MY CG E +FDE
Sbjct: 159 VSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDE-S 217
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR----NTVSWNSMISGYVRNVKFKEAL 206
+ DV + N+++ GL++ ++ E+ RLF + V R N VSW S+++ V+N + EA+
Sbjct: 218 SHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAV 277
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
+LFREMQ + I+P+ T+ +L A A + A+ G H F + F + V +A++DMY
Sbjct: 278 DLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMY 337
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG A +F +P + + WN+M+ G AM+G A++LF +QSS KPD ++F
Sbjct: 338 AKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFT 397
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
VL AC+ +G + + YF M + I P ++HY+CMV LGRAG L++A +I MP
Sbjct: 398 CVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPF 457
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
+PD IWGSLL +CR HGN+ +A+ AA+ + +L+ + YVL+SN+YA+ ++
Sbjct: 458 EPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRL 517
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R +MK V ++KE GCS IE+ +VH +AG HP + L L + ++ +G
Sbjct: 518 RDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLG 572
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 150/330 (45%), Gaps = 40/330 (12%)
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G+ D F+ +++++ Y G ++AR + D + VV W+++I A G+ + + L
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHR-TVVGWSALIAAHASHGDAEGAWGL 108
Query: 178 FDKM----VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
++M V N ++WN ++SG R+ + ++A+ M + P + L+A
Sbjct: 109 LERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGD 168
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+G + GE +H ++V L+ V TA+IDMY KCG + ++VF+ ++ N++
Sbjct: 169 VGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNAL 228
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM----- 348
V GL+ N +EA++LF ++ + +S+ +++ C +G+ +A D F M
Sbjct: 229 VAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGI 288
Query: 349 -------------------------TETYKIKPSIKH----YSCMVDALGRAGLLEEAEK 379
+ ++ H S +VD + G + +A
Sbjct: 289 EPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARM 348
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ +MP + + W +++ HG E A
Sbjct: 349 IFEAMPYR-NVVSWNAMIGGYAMHGEAENA 377
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 3/159 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ H ++ G D S ++ + G + A ++F + N+ WN +I G++
Sbjct: 312 RSAHCFSLRKGFHHDIYVGSALVDM-YAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAM 370
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV-KQGLEFDQ 123
NA+ LF M +S +P +T+ + A +Q G +G + K G+
Sbjct: 371 HGEAENAVRLFRSMQ-SSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRM 429
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ ++ + G L +A + +++ E D W S++
Sbjct: 430 EHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLL 468
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 171/502 (34%), Positives = 298/502 (59%), Gaps = 11/502 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IHA ++K GL D + +++ + G + A+ VF ++ + +I G++
Sbjct: 98 KQIHAQILKYGLTVDLHVHTSLISM-YAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYAS 156
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A +F ++ PI+ +++ ++ YA++G ++ +L ++K ++ D+
Sbjct: 157 RGNMDKAQKMFDEI----PIK-DVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDES 211
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTE---FDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
T++ + G + R + +D ++ N++I +KCGE++ + LF+ +
Sbjct: 212 TMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGL 271
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ +SWN++I GY KEAL +F+EM + P++ TM+S+L ACA LGAI G
Sbjct: 272 QYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGR 331
Query: 242 WIHNFLVTNCFEL--NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
WIH ++ + NT + T++IDMY KCG E A QVF+T+ K LS N+M+FG AM
Sbjct: 332 WIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAM 391
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G + A L S ++ ++PD I+F+ +L+AC+H+G + + F MT Y+I+P ++
Sbjct: 392 HGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLE 451
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CM+D LGR+GL +EAE+LI SM +PD +IWGSLL AC+ H N+E+ + A++++++
Sbjct: 452 HYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKI 511
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ YVL+SN+YA S ++++ R L+ + ++K PGCS IE+D VHEF+ G +
Sbjct: 512 EPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKF 571
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+ E+Y +L ++ L+ E G
Sbjct: 572 HPQNKEIYKMLEEIDSLLAETG 593
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 33/254 (12%)
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F + N +SWN+MI G+ + AL L+ M + P+ +T L +CAK A
Sbjct: 34 VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT--------------- 281
++G+ IH ++ ++ V T++I MY + G E A +VF+T
Sbjct: 94 AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153
Query: 282 ----------------VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
+P K + WN+M+ G A G EA++LF+ + ++KPD +
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
VL+ C HSG V + + + + + ++K + ++D + G +E A L +
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWI-DNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQ 272
Query: 386 SDPDAIIWGSLLSA 399
D I W +L+
Sbjct: 273 Y-KDVISWNTLIGG 285
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 255/410 (62%), Gaps = 4/410 (0%)
Query: 84 IQPQRLTYPSLFKAYAQLGLARD--GAQLHGRVVKQGLEF-DQFIHNTIIYMYANCGFLS 140
I P +T+ +L A L + G LH K GL+ + + ++ MYA CG +
Sbjct: 6 IDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAKCGHVE 65
Query: 141 EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNV 200
+RL FDE+ + + +WN+MI G + G+I E+ +FD+M R +SW +I+G+V+
Sbjct: 66 LSRLCFDELKVK-NSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMG 124
Query: 201 KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
F+EALE FR+MQ ++P T+V++L+ACA LGA+ G W+H + + N +
Sbjct: 125 LFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNVKICN 184
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
++ID+Y +CG E A QVF + ++ L WNS++ GLA NG+ EA++ F +Q KP
Sbjct: 185 SLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQGFKP 244
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
+ +SF LTAC+H+G V++ YF +M +KI P I+HY C+VD RAG LE+A +
Sbjct: 245 NDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSV 304
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQF 440
+++MP P+ ++ GSLL+ACR G++E+A++ ++ LD YVL+SN+YAA ++
Sbjct: 305 VQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYAAVGRW 364
Query: 441 EEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLL 490
+ A ++R+ MK + I+K+PG S IE+ ++HEFVAG + H KA ++Y +L
Sbjct: 365 DGACKQRMTMKALGIQKKPGFSSIEIGCDIHEFVAGDKSHDKAEDIYSML 414
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 134/311 (43%), Gaps = 65/311 (20%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+HA+ K GL + L + G + + L F ++K N F WNT+I GF ++
Sbjct: 34 LHAYTRKLGLDTCNLMVGTALVDMYAKCGHVELSRLCFDELKVKNSFSWNTMIDGFVRNG 93
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
R AI +F +M + S ++P R+T ++
Sbjct: 94 KIREAIEVFDEMPERGVISWTVLINGFVKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLS 153
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A LG G +H +K+GL + I N++I +Y+ CG + AR +F+++ E +V
Sbjct: 154 ACANLGALGLGLWVHRYALKKGLRDNVKICNSLIDLYSRCGAIELARQVFEKM-GERTLV 212
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I GLA G + EALE F MQ+Q
Sbjct: 213 SWNSIIGGLAANGFTE-------------------------------EALEHFDLMQKQG 241
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCPER 274
KP++ + L AC+ G + +G + ++ +++ + I+D+Y + G E
Sbjct: 242 FKPNDVSFTGALTACSHTGLVDEGLKYFD-IMERVHKISPRIEHYGCIVDLYSRAGRLED 300
Query: 275 ALQVFNTVPKK 285
A+ V +P K
Sbjct: 301 AMSVVQNMPMK 311
>gi|62321090|dbj|BAD94184.1| hypothetical protein [Arabidopsis thaliana]
Length = 577
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 300/524 (57%), Gaps = 37/524 (7%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K L+ A +IKT L +D ++ + CTS ++ A TQ+++PN+F++N + +G
Sbjct: 42 KLLESALAAMIKTSLNQDCRLMNQFITACTSFKC-LDLAVSTMTQMQEPNVFVYNALFKG 100
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
F S P ++ L++ ML S + P TY SL KA + +R G L + K G F
Sbjct: 101 FVTCSHPIRSLELYVRMLRDS-VSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGF 157
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM-------------------- 161
I T+I Y+ G + EAR +FDE+ E D +AW +M
Sbjct: 158 HVKIQTTLIDFYSATGGIREARKVFDEM-PERDDIAWTTMVSAYRRVLDMDSANSLANQM 216
Query: 162 -----------IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
I G G ++++ LF++M ++ +SW +MI GY +N +++EA+ +F
Sbjct: 217 SEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFY 276
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M E+ I P E TM ++++ACA LG + G+ +H + + N F L+ + +A++DMY KCG
Sbjct: 277 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 336
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
ERAL VF +PKK L CWNS++ GLA +G+ EA+K+F+ ++ ++KP+ ++F++V T
Sbjct: 337 SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 396
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC H+G V++ + + M + Y I +++HY MV +AGL+ EA +LI +M +P+A
Sbjct: 397 ACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNA 456
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
+IWG+LL CR H N+ +A+ A +++ L+ S Y L+ ++YA ++ + E R M
Sbjct: 457 VIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRM 516
Query: 451 KEVKIEKE-PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+E+ IEK PG S I +D H F A + H + EV LLL+++
Sbjct: 517 RELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 560
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 180/530 (33%), Positives = 292/530 (55%), Gaps = 34/530 (6%)
Query: 5 KKIHAHLIKTGLAK-DPIAAS--RILAFCTSP---------------------------A 34
+KIH+ ++K GL P+A S + A C P +
Sbjct: 162 RKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQS 221
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G A F ++ ++ WN++I G+SQ A+ +F ML ++P T S+
Sbjct: 222 GQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASI 281
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE-F 153
A A L G Q+H +++ E + N +I MYA G + ARL+ + T
Sbjct: 282 LSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL 341
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+++A+ S++ G K G + +R +F+K+ R+ V+W +MI GYV+N + +ALELFR M
Sbjct: 342 NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMV 401
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ +P+ +T+ ++L+ + L + G+ IH + V A+I MY K G
Sbjct: 402 NEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNIN 461
Query: 274 RALQVFNTVP--KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A +VF+ +P KK + W SM+ LA +G EAI LF + S +KPD+I+++ VL+A
Sbjct: 462 VAKRVFD-LPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSA 520
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H G V Q + Y+ +MTE ++I+P++ HY+CM+D GRAGLL+EA I SMP +PD I
Sbjct: 521 CTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNI 580
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
WGSLL++C+ H N ++AK AA++++ +D S Y+ ++N+Y+A ++E A + R LMK
Sbjct: 581 AWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMK 640
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ + KE G S I + EVH F +HP+ E+Y L+ ++ I++MG
Sbjct: 641 DRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMG 690
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 173/349 (49%), Gaps = 39/349 (11%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G +H +++K+GL ++ N ++ YA G L A +FDE+ + +WN++I G A
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLK-STFSWNTLISGYA 87
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
K G + SRRL +M + VSW ++I GY + F A+ +F +M + + PS+FT+ +
Sbjct: 88 KQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSN 147
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP-------------- 272
+L++CA + G IH+F+V V T++++MY KCG P
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 273 -----------------ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG-LQ 314
E A F +P + + WNSM+ G + GY EA+ +FS L
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDY--FTLMTETYKIKPSIKHYSCMVDALGRAG 372
+LKPD + ++L+AC + K+N K + L ET + S + ++ ++G
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAET---ETSGAVGNALISMYAKSG 324
Query: 373 LLEEAEKLI-RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+E A ++ + S+ + I + SLL K GN++ A++ ++ + D
Sbjct: 325 GVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRD 373
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 12/230 (5%)
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
SEF +L ++ G +H ++ L ++ ++ Y K G A VF
Sbjct: 10 SEF-FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVF 68
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+ +P K WN+++ G A G + +L + D +S+ A++ N G +
Sbjct: 69 DEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDC----DPVSWTAIIVGYNQFGLFD 124
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL---IRSMPSDPDAIIWGSL 396
A F M + ++ PS S ++ + L+ K+ + + + SL
Sbjct: 125 NAIWMFAKMI-SERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSL 183
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
L+ K G+ +AK ++ KN S L+S LY S QFE A +
Sbjct: 184 LNMYAKCGDPVIAKVVFDRMTV--KNISTWNALIS-LYMQSGQFELAASQ 230
>gi|297745917|emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 195/565 (34%), Positives = 298/565 (52%), Gaps = 119/565 (21%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K LK+IHA +++TGL DP +ASR++ A SP ++YA VF QI PNL+ WNT+IR
Sbjct: 49 KQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIR 108
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA----------------------- 97
++ SS P ++L+F+ ML SP P + T+P L KA
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168
Query: 98 ------------YA---QLGLA---------RD--------GAQLHGRVVKQGLEFDQ-- 123
YA +LGL RD A + G ++ LE Q
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEM 228
Query: 124 ------FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
+ N ++ MY CG + +A+ +FD++ E D+V+W +M++G AK GE D ++ +
Sbjct: 229 ETQNSLTLSNAMLDMYTKCGSVEDAKRLFDKM-PEKDIVSWTTMLVGYAKIGEYDAAQGI 287
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGA 236
FD M +++ +WN++IS Y + K KEALELF E+Q + KP E T+
Sbjct: 288 FDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTL------------ 335
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+QG +LN + T++IDMYCKCG ++AL VF++V +K + W++M+ G
Sbjct: 336 -KQG-----------MKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAG 383
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LAM+G+ +AI LFS +Q +KP+ ++F +L AC+H G V + + +F M Y
Sbjct: 384 LAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYG--- 440
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
MP P A +WG+LL AC H N+ +A+QA Q+
Sbjct: 441 --------------------------KMPMAPAASVWGALLGACTIHENVVLAEQACSQL 474
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
IEL+ YVL+SN+YA + +++ R LM++V ++KEPGCS IEVDG VHEF+ G
Sbjct: 475 IELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVG 534
Query: 477 GRLHPKAPEVYLLLNDLGLLIQEMG 501
HP A ++Y L+++ ++ +G
Sbjct: 535 DNSHPSAKKIYAKLDEIVARLETIG 559
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 281/497 (56%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+H + K GL +P + ++ + GDI+ A ++F ++ + N+ W +I G++Q
Sbjct: 217 QKVHMEIAKAGLELEPRVGTSLVGM-YAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQ 275
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ L ++ + + + P ++TY S+ + G ++H +++ G + +
Sbjct: 276 QGQVDVALEL-LEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIW 334
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N +I MY KCG + E+R+LF + R
Sbjct: 335 VVNALITMYC--------------------------------KCGGLKEARKLFGDLPHR 362
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V+W +M++GY + EA++LFR MQ+Q IKP + T S L +C+ +++G+ IH
Sbjct: 363 DVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIH 422
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
LV + L+ + +A++ MY KCG + A VFN + ++ + W +M+ G A +G
Sbjct: 423 QQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCR 482
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA++ F ++ +KPD ++F +VL+AC H G V + + +F M Y IKP ++HYSC
Sbjct: 483 EALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCF 542
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG LEEAE +I +MP P +WG+LLSACR H ++E ++AA+ +++LD ++
Sbjct: 543 VDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDD 602
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YV +SN+YAA+ ++E+A + R +M++ + KEPG S IEVDG+VH F + HP+A
Sbjct: 603 GAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAK 662
Query: 485 EVYLLLNDLGLLIQEMG 501
E+Y L L I+E G
Sbjct: 663 EIYAELGKLTEQIKEQG 679
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 159/339 (46%), Gaps = 46/339 (13%)
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
+ L + A+L G ++H ++K G++ ++++ NT++ MYA
Sbjct: 99 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYA---------------- 142
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
KCG + ++RR+FD + RN VSW +MI +V + EA + +
Sbjct: 143 ----------------KCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYE 186
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
M+ KP + T VSLLNA ++ G+ +H + EL V T+++ MY KCG
Sbjct: 187 TMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCG 246
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
+A +F+ +P+K + W ++ G A G + A++L +Q + + P+ I++ ++L
Sbjct: 247 DISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQ 306
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL----GRAGLLEEAEKLIRSMPS 386
C + K Y I+ +V+AL + G L+EA KL +P
Sbjct: 307 GCTTPLALEHGKK-----VHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPH 361
Query: 387 DPDAIIWGSLLSACRKHG----NIEMAKQAAKQIIELDK 421
D + W ++++ + G I++ ++ +Q I+ DK
Sbjct: 362 R-DVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDK 399
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 122/277 (44%), Gaps = 30/277 (10%)
Query: 158 WNSMIIGLAKCGE-----------IDESRRLFDKMVSRNTVSWNSM------------IS 194
WNS + L +CG +D + L VS + + N+ +S
Sbjct: 11 WNSRVTQL-RCGRSILMFNRYQSNVDTAFELTTPTVSHDQLPGNAGFRKVDTLANSGDVS 69
Query: 195 GYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFEL 254
+ + KEAL + M Q + LL CA+L ++ QG +H ++ + +
Sbjct: 70 ILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQP 129
Query: 255 NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ 314
N + ++ MY KCG A +VF+ + + + W +M+ EA K + ++
Sbjct: 130 NRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMK 189
Query: 315 SSNLKPDYISFIAVLTACNHSG--KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAG 372
+ KPD ++F+++L A + +V Q K + + +++P + + +V + G
Sbjct: 190 LAGCKPDKVTFVSLLNAFTNPELLQVGQ-KVHMEIAKAGLELEPRVG--TSLVGMYAKCG 246
Query: 373 LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ +A+ + +P + + + W L++ + G +++A
Sbjct: 247 DISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVA 282
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 286/500 (57%), Gaps = 41/500 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K++HA + + G++ +P+ A++++ C S + A+L+F +I K NLF+WN +IRG
Sbjct: 21 KQLHARICQVGISFNPLLATKLVNLYCICNS----LTNAHLLFDRISKRNLFLWNVMIRG 76
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++ + AI L+ M + P + T+P + KA + L +G ++H V++ GLE
Sbjct: 77 YAWNGPYELAISLYYQMRDYGLV-PDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLES 135
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+ +I MYA KCG ++ +R++FDK+
Sbjct: 136 DVFVGAALIDMYA--------------------------------KCGCVESARQVFDKI 163
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ V WNSM++ Y +N + E+L L R M +KP+E T V + A A G + QG+
Sbjct: 164 DERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGK 223
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H + + FE N V TA++DMY K G A +F + +K + WN+M+ G AM+G
Sbjct: 224 ELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHG 283
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ NEA+ LF ++ L PD+I+F+ VL AC+H G +N+ K +F M + I P+++HY
Sbjct: 284 HANEALDLFKEMKGKVL-PDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHY 342
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+CM+D LG G LEEA KLI M +PDA +WG+LL +C+ HGN+EM + A ++++EL+
Sbjct: 343 TCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEP 402
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
++ YV++SN+YA + +++ R LM ++K CS IEV +VH F++ HP
Sbjct: 403 DDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHP 462
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
K+ +Y L G L++E G
Sbjct: 463 KSEAIYAELKRTGKLMKEAG 482
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 176/410 (42%), Gaps = 81/410 (19%)
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
Y SL ++ G QLH R+ + G+ F+ + ++ +Y C L+ A L+FD +
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRI- 62
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
S+R N WN MI GY N ++ A+ L+
Sbjct: 63 -----------------------SKR--------NLFLWNVMIRGYAWNGPYELAISLYY 91
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M++ + P +FT +L AC+ L A+ +G+ IH ++ + E + V A+IDMY KCG
Sbjct: 92 QMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCG 151
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI---- 326
C E A QVF+ + ++ + CWNSM+ + NG +E++ L + + LKP +F+
Sbjct: 152 CVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIA 211
Query: 327 -------------------------------AVLTACNHSGKVNQAKDYFTLMTETYKIK 355
A++ SG VN A+ F L+ E +
Sbjct: 212 ASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVS 271
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD--PDAIIWGSLLSACRKHGNIEMAKQAA 413
++ M+ G EA L + M PD I + +L+AC G + K
Sbjct: 272 -----WNAMITGYAMHGHANEALDLFKEMKGKVLPDHITFVGVLAACSHGGLLNEGKMHF 326
Query: 414 KQIIELDKN---ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPG 460
+ +I D N Y M +L + EEA + L+ E+++E + G
Sbjct: 327 RSMIS-DFNIWPTVQHYTCMIDLLGHCGRLEEAYK---LIMEMRVEPDAG 372
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 143/306 (46%), Gaps = 43/306 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M++ KKIH +I++GL D + ++ + G + A VF +I + ++ WN+++
Sbjct: 118 MEEGKKIHKDVIRSGLESDVFVGAALIDM-YAKCGCVESARQVFDKIDERDVVCWNSMLA 176
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+SQ+ P ++ L ++ + ++P T+ A A GL G +LHG + G E
Sbjct: 177 TYSQNGQPDESLAL-CRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFE 235
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ + ++ MYA G ++ AR +F E+ E VV+WN+MI G A G +
Sbjct: 236 SNDKVKTALMDMYAKSGSVNVARSLF-ELLEEKRVVSWNAMITGYAMHGHAN-------- 286
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
EAL+LF+EM+ + + P T V +L AC+ G + +G
Sbjct: 287 -----------------------EALDLFKEMKGK-VLPDHITFVGVLAACSHGGLLNEG 322
Query: 241 EWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCPERALQV---FNTVPKKGLSCWNSMVF 295
+ ++++ F + V T +ID+ CG E A ++ P G+ W +++
Sbjct: 323 KMHFRSMISD-FNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGV--WGALLH 379
Query: 296 GLAMNG 301
++G
Sbjct: 380 SCKIHG 385
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 295/535 (55%), Gaps = 44/535 (8%)
Query: 2 KDLKKIHAHLIKTGLAK-DPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K K +H HL TG + I A+ ++ D+ A VF ++ NL+ WN ++
Sbjct: 79 KGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVE-ARKVFDKMSVRNLYSWNHMLA 137
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQ-------LGLARD------- 106
G+++ NA LF M+ + +++ ++ AYA+ +GL RD
Sbjct: 138 GYAKLGDVNNARKLFDRMM-----EKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMG 192
Query: 107 ---------------------GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLM 145
Q+HG+V+ G + + ++I+ Y+ CG + AR +
Sbjct: 193 FNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTL 252
Query: 146 FDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEA 205
FDE+ + D+ AW +++ G AK G+++ + LF +M +N VSW+++ISGY RN EA
Sbjct: 253 FDEMLVK-DIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEA 311
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
L+ F +M + I P ++T S L ACA + A++ G+ +H +L+ F NTIVV+++IDM
Sbjct: 312 LDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDM 371
Query: 266 YCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
Y KCG E + VF+ + K+ + WN+M+ LA NG+ +A+++F+ + S LKPD I+
Sbjct: 372 YSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRIT 431
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
FI +L+AC+HSG V + +F MT + + P +HY+C++D LGRAG E + +M
Sbjct: 432 FIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENM 491
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
PD +W +LL CR H NIE+ ++ A+++IEL S YV +++LYA ++E
Sbjct: 492 SCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVE 551
Query: 445 EERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQE 499
+ R LM E I KE G S I+V + H F+A RLHP E+YLLL L +E
Sbjct: 552 KVRELMDEKFIRKERGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTEE 606
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 184/388 (47%), Gaps = 36/388 (9%)
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF- 121
SQ P L ++D L I+ + L + A+ + G +H + G +
Sbjct: 39 SQGRLPE--ALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRP 96
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ N +I MY CG EAR +FD++ ++ +WN M+ G AK G+++ +R+LFD+M
Sbjct: 97 TTIVANHLIGMYFECGRDVEARKVFDKMSVR-NLYSWNHMLAGYAKLGDVNNARKLFDRM 155
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+ ++ VSWN+++ Y + F EA+ L+R+ + ++ + F+ +L C KL ++ +
Sbjct: 156 MEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAK 215
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCG---CPE------------------------- 273
+H ++ F N ++ ++I+D Y KCG C
Sbjct: 216 QVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWG 275
Query: 274 ---RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
A ++F+ +P+K W++++ G A N +EA+ F+ + + P+ +F + L
Sbjct: 276 DMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLC 335
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC + K + TY + + S ++D + G+LE + + M + D
Sbjct: 336 ACASIAALKHGKQVHGYLIRTY-FRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDV 394
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIE 418
++W +++SA ++G+ E A Q ++E
Sbjct: 395 VVWNTMISALAQNGHGEKAMQMFNDMVE 422
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 172/489 (35%), Positives = 276/489 (56%), Gaps = 34/489 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H IK+G D + +L + AYL+F +K+ + WN II Q
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDL-YGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 429
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ + IL F +ML ++P TY S+ KA A L G +H +V+K GL D F
Sbjct: 430 NGHYDDTILHFNEMLRFG-MKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAF 488
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ +T++ MY KCG IDE+++L D++ +
Sbjct: 489 VASTVVDMYC--------------------------------KCGIIDEAQKLHDRIGGQ 516
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
VSWN+++SG+ N + +EA + F EM + +KP FT ++L+ CA L I G+ IH
Sbjct: 517 QVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIH 576
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ + + + ++DMY KCG +L VF V K+ WN+M+ G A++G
Sbjct: 577 GQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGV 636
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+++F +Q N+ P++ +F+AVL AC+H G + YF LMT YK++P ++H++CM
Sbjct: 637 EALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACM 696
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGR+ +EA K I SMP DA+IW +LLS C+ ++E+A+ AA ++ LD ++S
Sbjct: 697 VDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDS 756
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
Y+L+SN+YA S ++ + R L+K+ +++KEPGCS IEV E+H F+ G + HP++
Sbjct: 757 SVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSG 816
Query: 485 EVYLLLNDL 493
E+Y +LNDL
Sbjct: 817 ELYEMLNDL 825
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 172/376 (45%), Gaps = 35/376 (9%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S AGDI+ A +F + P++ WN ++ G+ Q + ++ LF++M + P R T+
Sbjct: 94 SHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM-ARRGVSPDRTTF 152
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
L K+ + L G Q+H VK GLE D + ++ MY
Sbjct: 153 AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG----------------- 195
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
KC +D++ F M RN VSW + I+G V+N ++ LELF E
Sbjct: 196 ---------------KCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE 240
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ + S+ + S +CA + + G +H + N F + +V TAI+D+Y K
Sbjct: 241 MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANS 300
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A + F +P + N+M+ GL G EA+ LF + S+++ D +S V +A
Sbjct: 301 LTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSA 360
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C + Q + L ++ I + ++D G+ L EA + + M D++
Sbjct: 361 CAETKGYFQGQQVHCLAIKS-GFDVDICVNNAVLDLYGKCKALMEAYLIFQGM-KQKDSV 418
Query: 392 IWGSLLSACRKHGNIE 407
W ++++A ++G+ +
Sbjct: 419 SWNAIIAALEQNGHYD 434
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 178/400 (44%), Gaps = 36/400 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++HAH IK + D + + I+ + A + A F + + N ++ G +
Sbjct: 270 RQLHAHAIKNKFSSDRVVGTAIVDV-YAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ LF ++ S I+ ++ +F A A+ G Q+H +K G + D
Sbjct: 329 AGLGIEAMGLF-QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 387
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
++N ++ +Y C L EA L+F + + D V+WN++I L + G D++
Sbjct: 388 VNNAVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAALEQNGHYDDT---------- 436
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ F EM +KP +FT S+L ACA L ++ G +H
Sbjct: 437 ---------------------ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 475
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ ++ + + V + ++DMYCKCG + A ++ + + + + WN+++ G ++N
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 535
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA K FS + LKPD+ +F VL C + + K + + + S +
Sbjct: 536 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS-STL 594
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
VD + G + ++ L+ D + W +++ HG
Sbjct: 595 VDMYAKCGDMPDS-LLVFEKVEKRDFVSWNAMICGYALHG 633
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 147/308 (47%), Gaps = 8/308 (2%)
Query: 83 PIQPQRLTYPSLFKAYAQLG--LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLS 140
P+ P R+T+ +F++ AQ G G H R+V G F+ N ++ MYA C +
Sbjct: 10 PVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAA 69
Query: 141 EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNV 200
AR +FD + D V+WN+M+ + G+I + LFD M + VSWN+++SGY +
Sbjct: 70 CARRVFDAMPRR-DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRG 128
Query: 201 KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
F+E+++LF EM + + P T LL +C+ L + G +H V E++ +
Sbjct: 129 MFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS 188
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
A++DMY KC + AL F +P++ W + + G N ++LF +Q L
Sbjct: 189 ALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGV 248
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLEEAE 378
S+ + +C +N + L K K S + +VD +A L +A
Sbjct: 249 SQPSYASAFRSCAAMSCLNTGRQ---LHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDAR 305
Query: 379 KLIRSMPS 386
+ +P+
Sbjct: 306 RAFFGLPN 313
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 184/456 (40%), Gaps = 87/456 (19%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAF---CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
++HA +KTGL D S ++ C S ++ A F + + N W I G
Sbjct: 170 QVHALAVKTGLEIDVRTGSALVDMYGKCRS----LDDALCFFYGMPERNWVSWGAAIAGC 225
Query: 63 SQSSTPRNAILLFIDM--LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
Q+ + LFI+M L QP +Y S F++ A + G QLH +K
Sbjct: 226 VQNEQYVRGLELFIEMQRLGLGVSQP---SYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 282
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D+ + I+ +YA L++AR R F
Sbjct: 283 SDRVVGTAIVDVYAKANSLTDAR--------------------------------RAFFG 310
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ + + N+M+ G VR EA+ LF+ M +I+ ++ + +ACA+ QG
Sbjct: 311 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 370
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H + + F+++ V A++D+Y KC A +F + +K WN+++ L N
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 430
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ ++ I F+ + +KPD ++ +VL AC + + LM IK +
Sbjct: 431 GHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLE-----YGLMVHDKVIKSGLGS 485
Query: 361 ----YSCMVDALGRAGLLEEAEKL----------------------------------IR 382
S +VD + G+++EA+KL +
Sbjct: 486 DAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEML 545
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
M PD + ++L C IE+ KQ QII+
Sbjct: 546 DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 581
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 175/499 (35%), Positives = 282/499 (56%), Gaps = 37/499 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K IHA L+ + D + + +L + GD+ YA +F ++ ++ W +I G+SQ
Sbjct: 35 KIIHALLLNSRFRDDLVMQNTLLNL-YAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQ 93
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLAR--DGAQLHGRVVKQGLEFD 122
P++A+LL +ML ++P + T SL KA + +G G QLHG ++ G + +
Sbjct: 94 HDRPQDALLLLPEMLRIG-LKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSN 152
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
++ I+ MYA C L EA+L +FD MV
Sbjct: 153 VYVSCAILDMYARCHHLEEAQL--------------------------------IFDVMV 180
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
S+N VSWN++I+GY R + +A LF M +N+KP+ FT S+L ACA +G++ QG+W
Sbjct: 181 SKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKW 240
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H ++ +L V ++DMY K G E A +VF+ + K+ + WNSM+ G + +G
Sbjct: 241 VHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGL 300
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
A++ F + + + P+ I+F+ VLTAC+H+G +++ + YF +M + Y ++P I HY
Sbjct: 301 GKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMM-KKYNVEPQISHYV 359
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
MVD LGRAG L+ A + I MP P A +WG+LL ACR H N+E+ AA+ I ELD +
Sbjct: 360 TMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSH 419
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+VL+ N+YA + ++ +A + R +MKE ++KEP CS +E++ EVH FVA HP+
Sbjct: 420 YPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQ 479
Query: 483 APEVYLLLNDLGLLIQEMG 501
E++ + + I+E+G
Sbjct: 480 RREIHNMWEQISDKIKEIG 498
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 36/328 (10%)
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE 152
+L K L +G +H ++ D + NT++ +YA CG L AR +FDE+ +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
DVV W ++I+GY ++ + ++AL L EM
Sbjct: 80 -DVVTW-------------------------------TALITGYSQHDRPQDALLLLPEM 107
Query: 213 QEQNIKPSEFTMVSLLNACAKLGA--IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+KP++FT+ SLL A + +G+ + QG +H + ++ N V AI+DMY +C
Sbjct: 108 LRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCH 167
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
E A +F+ + K WN+++ G A G ++A LFS + N+KP + ++ +VL
Sbjct: 168 HLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLC 227
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC G + Q K LM + + K + ++D ++G +E+A+K+ + + D
Sbjct: 228 ACASMGSLEQGKWVHALMIK-WGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRL-AKRDV 285
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ W S+L+ +HG ++A Q ++++
Sbjct: 286 VSWNSMLTGYSQHGLGKVALQRFEEMLR 313
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 95/206 (46%), Gaps = 5/206 (2%)
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
+EL R+ + N E +LL C L + +G+ IH L+ + F + ++ ++++
Sbjct: 1 MELIRQQCKNNAGAREICH-TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNL 59
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y KCG A ++F+ + + + W +++ G + + +A+ L + LKP+ +
Sbjct: 60 YAKCGDLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTL 119
Query: 326 IAVLTACNHSGKVN--QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
++L A + G + Q + L Y ++ ++D R LEEA+ +
Sbjct: 120 ASLLKAASGVGSTDVLQGRQLHGLCLR-YGYDSNVYVSCAILDMYARCHHLEEAQLIFDV 178
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMA 409
M S + + W +L++ + G + A
Sbjct: 179 MVS-KNEVSWNALIAGYARKGQGDKA 203
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 172/489 (35%), Positives = 276/489 (56%), Gaps = 34/489 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H IK+G D + +L + AYL+F +K+ + WN II Q
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDL-YGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 429
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ + IL F +ML ++P TY S+ KA A L G +H +V+K GL D F
Sbjct: 430 NGHYDDTILHFNEMLRFG-MKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAF 488
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ +T++ MY KCG IDE+++L D++ +
Sbjct: 489 VASTVVDMYC--------------------------------KCGIIDEAQKLHDRIGGQ 516
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
VSWN+++SG+ N + +EA + F EM + +KP FT ++L+ CA L I G+ IH
Sbjct: 517 QVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIH 576
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ + + + ++DMY KCG +L VF V K+ WN+M+ G A++G
Sbjct: 577 GQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGV 636
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+++F +Q N+ P++ +F+AVL AC+H G + YF LMT YK++P ++H++CM
Sbjct: 637 EALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACM 696
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGR+ +EA K I SMP DA+IW +LLS C+ ++E+A+ AA ++ LD ++S
Sbjct: 697 VDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDS 756
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
Y+L+SN+YA S ++ + R L+K+ +++KEPGCS IEV E+H F+ G + HP++
Sbjct: 757 SVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSG 816
Query: 485 EVYLLLNDL 493
E+Y +LNDL
Sbjct: 817 ELYEMLNDL 825
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 172/376 (45%), Gaps = 35/376 (9%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S AGDI+ A +F + P++ WN ++ G+ Q + ++ LF++M + P R T+
Sbjct: 94 SHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM-ARRGVSPDRTTF 152
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
L K+ + L G Q+H VK GLE D + ++ MY
Sbjct: 153 AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG----------------- 195
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
KC +D++ F M RN VSW + I+G V+N ++ LELF E
Sbjct: 196 ---------------KCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE 240
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ + S+ + S +CA + + G +H + N F + +V TAI+D+Y K
Sbjct: 241 MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANS 300
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A + F +P + N+M+ GL G EA+ LF + S+++ D +S V +A
Sbjct: 301 LTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSA 360
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C + Q + L ++ I + ++D G+ L EA + + M D++
Sbjct: 361 CAETKGYFQGQQVHCLAIKS-GFDVDICVNNAVLDLYGKCKALMEAYLIFQGM-KQKDSV 418
Query: 392 IWGSLLSACRKHGNIE 407
W ++++A ++G+ +
Sbjct: 419 SWNAIIAALEQNGHYD 434
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 178/400 (44%), Gaps = 36/400 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++HAH IK + D + + I+ + A + A F + + N ++ G +
Sbjct: 270 RQLHAHAIKNKFSSDRVVGTAIVDV-YAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ LF ++ S I+ ++ +F A A+ G Q+H +K G + D
Sbjct: 329 AGLGIEAMGLF-QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 387
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
++N ++ +Y C L EA L+F + + D V+WN++I L + G D++
Sbjct: 388 VNNAVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAALEQNGHYDDT---------- 436
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ F EM +KP +FT S+L ACA L ++ G +H
Sbjct: 437 ---------------------ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 475
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ ++ + + V + ++DMYCKCG + A ++ + + + + WN+++ G ++N
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 535
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA K FS + LKPD+ +F VL C + + K + + + S +
Sbjct: 536 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS-STL 594
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
VD + G + ++ L+ D + W +++ HG
Sbjct: 595 VDMYAKCGDMPDS-LLVFEKVEKRDFVSWNAMICGYALHG 633
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 148/308 (48%), Gaps = 8/308 (2%)
Query: 83 PIQPQRLTYPSLFKAYAQLG--LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLS 140
P+ P R+T+ +F++ AQ G G H R+V G + F+ N ++ MYA C +
Sbjct: 10 PVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAA 69
Query: 141 EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNV 200
AR +FD + D V+WN+M+ + G+I + LFD M + VSWN+++SGY +
Sbjct: 70 CARRVFDAMPRR-DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRG 128
Query: 201 KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
F+E+++LF EM + + P T LL +C+ L + G +H V E++ +
Sbjct: 129 MFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS 188
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
A++DMY KC + AL F +P++ W + + G N ++LF +Q L
Sbjct: 189 ALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGV 248
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLEEAE 378
S+ + +C +N + L K K S + +VD +A L +A
Sbjct: 249 SQPSYASAFRSCAAMSCLNTGRQ---LHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDAR 305
Query: 379 KLIRSMPS 386
+ +P+
Sbjct: 306 RAFFGLPN 313
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 184/456 (40%), Gaps = 87/456 (19%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAF---CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
++HA +KTGL D S ++ C S ++ A F + + N W I G
Sbjct: 170 QVHALAVKTGLEIDVRTGSALVDMYGKCRS----LDDALCFFYGMPERNWVSWGAAIAGC 225
Query: 63 SQSSTPRNAILLFIDM--LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
Q+ + LFI+M L QP +Y S F++ A + G QLH +K
Sbjct: 226 VQNEQYVRGLELFIEMQRLGLGVSQP---SYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 282
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D+ + I+ +YA L++AR R F
Sbjct: 283 SDRVVGTAIVDVYAKANSLTDAR--------------------------------RAFFG 310
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ + + N+M+ G VR EA+ LF+ M +I+ ++ + +ACA+ QG
Sbjct: 311 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 370
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H + + F+++ V A++D+Y KC A +F + +K WN+++ L N
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 430
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ ++ I F+ + +KPD ++ +VL AC + + LM IK +
Sbjct: 431 GHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLE-----YGLMVHDKVIKSGLGS 485
Query: 361 ----YSCMVDALGRAGLLEEAEKL----------------------------------IR 382
S +VD + G+++EA+KL +
Sbjct: 486 DAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEML 545
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
M PD + ++L C IE+ KQ QII+
Sbjct: 546 DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 581
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 172/489 (35%), Positives = 276/489 (56%), Gaps = 34/489 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H IK+G D + +L + AYL+F +K+ + WN II Q
Sbjct: 413 QQVHCLAIKSGFDVDICVNNAVLDL-YGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 471
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ + IL F +ML ++P TY S+ KA A L G +H +V+K GL D F
Sbjct: 472 NGHYDDTILHFNEMLRFG-MKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAF 530
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ +T++ MY KCG IDE+++L D++ +
Sbjct: 531 VASTVVDMYC--------------------------------KCGIIDEAQKLHDRIGGQ 558
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
VSWN+++SG+ N + +EA + F EM + +KP FT ++L+ CA L I G+ IH
Sbjct: 559 QVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIH 618
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ + + + ++DMY KCG +L VF V K+ WN+M+ G A++G
Sbjct: 619 GQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGV 678
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+++F +Q N+ P++ +F+AVL AC+H G + YF LMT YK++P ++H++CM
Sbjct: 679 EALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACM 738
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGR+ +EA K I SMP DA+IW +LLS C+ ++E+A+ AA ++ LD ++S
Sbjct: 739 VDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDS 798
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
Y+L+SN+YA S ++ + R L+K+ +++KEPGCS IEV E+H F+ G + HP++
Sbjct: 799 SVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSG 858
Query: 485 EVYLLLNDL 493
E+Y +LNDL
Sbjct: 859 ELYEMLNDL 867
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 172/376 (45%), Gaps = 35/376 (9%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S AGDI+ A +F + P++ WN ++ G+ Q + ++ LF++M + P R T+
Sbjct: 136 SHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM-ARRGVSPDRTTF 194
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
L K+ + L G Q+H VK GLE D + ++ MY
Sbjct: 195 AVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG----------------- 237
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
KC +D++ F M RN VSW + I+G V+N ++ LELF E
Sbjct: 238 ---------------KCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE 282
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ + S+ + S +CA + + G +H + N F + +V TAI+D+Y K
Sbjct: 283 MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANS 342
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A + F +P + N+M+ GL G EA+ LF + S+++ D +S V +A
Sbjct: 343 LTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSA 402
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C + Q + L ++ I + ++D G+ L EA + + M D++
Sbjct: 403 CAETKGYFQGQQVHCLAIKS-GFDVDICVNNAVLDLYGKCKALMEAYLIFQGM-KQKDSV 460
Query: 392 IWGSLLSACRKHGNIE 407
W ++++A ++G+ +
Sbjct: 461 SWNAIIAALEQNGHYD 476
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 178/400 (44%), Gaps = 36/400 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++HAH IK + D + + I+ + A + A F + + N ++ G +
Sbjct: 312 RQLHAHAIKNKFSSDRVVGTAIVDV-YAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 370
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ LF ++ S I+ ++ +F A A+ G Q+H +K G + D
Sbjct: 371 AGLGIEAMGLF-QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 429
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
++N ++ +Y C L EA L+F + + D V+WN++I L + G D++
Sbjct: 430 VNNAVLDLYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAALEQNGHYDDT---------- 478
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ F EM +KP +FT S+L ACA L ++ G +H
Sbjct: 479 ---------------------ILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVH 517
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ ++ + + V + ++DMYCKCG + A ++ + + + + WN+++ G ++N
Sbjct: 518 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 577
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA K FS + LKPD+ +F VL C + + K + + + S +
Sbjct: 578 EAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYIS-STL 636
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
VD + G + ++ L+ D + W +++ HG
Sbjct: 637 VDMYAKCGDMPDS-LLVFEKVEKRDFVSWNAMICGYALHG 675
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 147/308 (47%), Gaps = 8/308 (2%)
Query: 83 PIQPQRLTYPSLFKAYAQLG--LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLS 140
P+ P R+T+ +F++ AQ G G H R+V G F+ N ++ MYA C +
Sbjct: 52 PVAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAA 111
Query: 141 EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNV 200
AR +FD + D V+WN+M+ + G+I + LFD M + VSWN+++SGY +
Sbjct: 112 CARRVFDAMPRR-DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRG 170
Query: 201 KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
F+E+++LF EM + + P T LL +C+ L + G +H V E++ +
Sbjct: 171 MFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGS 230
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
A++DMY KC + AL F +P++ W + + G N ++LF +Q L
Sbjct: 231 ALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGV 290
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLEEAE 378
S+ + +C +N + L K K S + +VD +A L +A
Sbjct: 291 SQPSYASAFRSCAAMSCLNTGRQ---LHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDAR 347
Query: 379 KLIRSMPS 386
+ +P+
Sbjct: 348 RAFFGLPN 355
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 184/456 (40%), Gaps = 87/456 (19%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAF---CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
++HA +KTGL D S ++ C S ++ A F + + N W I G
Sbjct: 212 QVHALAVKTGLEIDVRTGSALVDMYGKCRS----LDDALCFFYGMPERNWVSWGAAIAGC 267
Query: 63 SQSSTPRNAILLFIDM--LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
Q+ + LFI+M L QP +Y S F++ A + G QLH +K
Sbjct: 268 VQNEQYVRGLELFIEMQRLGLGVSQP---SYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 324
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D+ + I+ +YA L++AR R F
Sbjct: 325 SDRVVGTAIVDVYAKANSLTDAR--------------------------------RAFFG 352
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ + + N+M+ G VR EA+ LF+ M +I+ ++ + +ACA+ QG
Sbjct: 353 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 412
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H + + F+++ V A++D+Y KC A +F + +K WN+++ L N
Sbjct: 413 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 472
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ ++ I F+ + +KPD ++ +VL AC + + LM IK +
Sbjct: 473 GHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLE-----YGLMVHDKVIKSGLGS 527
Query: 361 ----YSCMVDALGRAGLLEEAEKL----------------------------------IR 382
S +VD + G+++EA+KL +
Sbjct: 528 DAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEML 587
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
M PD + ++L C IE+ KQ QII+
Sbjct: 588 DMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIK 623
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 264/433 (60%), Gaps = 5/433 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTS-PIQPQRLTYPS 93
G ++ A VF +++ ++F W +I F ++ A+ LF DM P+ +
Sbjct: 214 GMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMV--C 271
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ A A+L + R+G HG + GL + N +I+MY++ + AR +FD
Sbjct: 272 VVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQC-L 330
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
D +WNSMI G K G + +++ LF M ++ VSW +MISG V+N + EAL +F MQ
Sbjct: 331 DQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQ 390
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
Q IKP E T+VS+++AC + ++ QG+ +H ++ + + + I+ T++IDMY KCGC E
Sbjct: 391 AQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLE 450
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL-KPDYISFIAVLTAC 332
AL+VF+T+ ++G CWN+++ GLAMNG +++ +FS ++SS+ P+ I+F VL+AC
Sbjct: 451 SALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSAC 510
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H+G V + + +F LM Y I P+I+HY CMVD LGRAG ++EAE LI SMP PD
Sbjct: 511 RHAGLVEEGQHFFKLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPA 570
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
WG+LL +C KHG+ E+ ++ ++++ LD + + ++SN+YA+ ++ + R MK+
Sbjct: 571 WGALLGSCWKHGDNEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQ 630
Query: 453 VKIEKEPGCSLIE 465
+ K PG S++E
Sbjct: 631 WHVPKIPGSSVVE 643
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 211/510 (41%), Gaps = 106/510 (20%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSP---AGDINYAYLVFTQIKKPNLFIWNTI 58
+ L +IHA + +GL D AASR++ F TS +++ + + +PN F N +
Sbjct: 18 RHLLQIHAQFVASGLLADAFAASRLILFTTSTRLLPLPFHHSLRLLHVVHRPNAFSCNMV 77
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
++ + P + L+ M P T+ L A A +G Q+H V+ G
Sbjct: 78 LKAAREHGLPHLCLPLYASM----SAAPDCYTHTILAAACATRRAIEEGRQVHCHAVRHG 133
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN------------------- 159
+ ++ N ++ MY+ CG L +AR +FD +D V+WN
Sbjct: 134 FGRNLYLANALMSMYSACGCLGDARKVFD-AGPVWDAVSWNTILAAYVQAEDVDQAVGVF 192
Query: 160 ------------SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
SM+ + G +DE+R++FD + ++ +W +MIS + RN KF EAL
Sbjct: 193 ARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALA 252
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
LF +M+ + E MV ++ ACA+L R GE H V A+I MY
Sbjct: 253 LFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYS 312
Query: 268 -------------------------------KCGCPERALQVFNTVPKKGLSCWNSMVFG 296
K G + A ++F +P K W +M+ G
Sbjct: 313 SFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISG 372
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
N +EA+ +F+ +Q+ +KPD ++ ++V++AC + + Q K + E ++
Sbjct: 373 CVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIRE-HQYTI 431
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSM-------------------------------- 384
++ + ++D + G LE A ++ +M
Sbjct: 432 TVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEME 491
Query: 385 ---PSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ P+ I + +LSACR G +E +
Sbjct: 492 SSSTATPNEITFTGVLSACRHAGLVEEGQH 521
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 174/501 (34%), Positives = 286/501 (57%), Gaps = 38/501 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K++H+ +I+ GLA D ++ A C + G ++ + VF Q+ + N+ W II
Sbjct: 76 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAAD-GSVDDSRKVFEQMPEHNVMSWTAIITA 134
Query: 62 FSQSS-TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++QS + AI LF M ++ I+P ++ S+ KA L G Q++ VK G+
Sbjct: 135 YAQSGECDKEAIELFCKM-ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA 193
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N++I MYA + G ++++R+ FD
Sbjct: 194 SVNCVGNSLISMYA--------------------------------RSGRMEDARKAFDI 221
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ +N VS+N+++ GY +N+K +EA LF E+ + I S FT SLL+ A +GA+ +G
Sbjct: 222 LFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 281
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
E IH L+ ++ N + A+I MY +CG E A QVFN + + + W SM+ G A +
Sbjct: 282 EQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKH 341
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ A+++F + + KP+ I+++AVL+AC+H G +++ + +F M + + I P ++H
Sbjct: 342 GFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEH 401
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+CMVD LGR+GLL EA + I SMP DA++W +LL ACR HGN E+ + AA+ I+E +
Sbjct: 402 YACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQE 461
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
++ Y+L+SNL+A++ Q+++ ++ R MKE + KE GCS IEV+ VH F G H
Sbjct: 462 PDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSH 521
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+A ++Y L+ L I+EMG
Sbjct: 522 PQAWQIYQELDQLASKIKEMG 542
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 118/212 (55%), Gaps = 13/212 (6%)
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
++FDKM RN V+W MI+ + + ++A++LF +M+ P FT S+L+AC +LG
Sbjct: 11 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC---GCPERALQVFNTVPKKGLSCWNS 292
+ G+ +H+ ++ L+ V +++DMY KC G + + +VF +P+ + W +
Sbjct: 71 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 130
Query: 293 MVFGLAMNGY-ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
++ A +G + EAI+LF + S +++P++ SF +VL AC N + Y +
Sbjct: 131 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG-----NLSDPYTGEQVYS 185
Query: 352 YKIKPSIKHYSCMVDAL----GRAGLLEEAEK 379
Y +K I +C+ ++L R+G +E+A K
Sbjct: 186 YAVKLGIASVNCVGNSLISMYARSGRMEDARK 217
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 160/433 (36%), Positives = 264/433 (60%), Gaps = 5/433 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTS-PIQPQRLTYPS 93
G + A VF + + F W ++ F ++ A+ +F DM P+ + S
Sbjct: 217 GMVEEARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMV--S 274
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ A A+ G+ ++G HG VV+ GL + N +I+MY++C + AR +FD ++
Sbjct: 275 VVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGES-L 333
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
D +WNSMI G K G +++++ LFD M ++ VSW++MI+G V N + EAL +F M+
Sbjct: 334 DHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMR 393
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
IKP + T+VS+++AC+ L A+ QG+ +H ++ + + ++ T++IDMY KCGC E
Sbjct: 394 AHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCME 453
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK-PDYISFIAVLTAC 332
AL+VF+ + +KG CWN+++ GLAMNG ++ +FS ++++ P+ I+F VL+AC
Sbjct: 454 AALEVFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSAC 513
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H G V + + +F LM Y+I P+I+HY CMVD LGRAG + EAE +I+SMP PD
Sbjct: 514 RHGGLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPA 573
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
WG+LL AC KHG+ E+ ++ K++++LD + ++SN+YA+ ++ + R MK+
Sbjct: 574 WGALLGACWKHGDSEVGERVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQ 633
Query: 453 VKIEKEPGCSLIE 465
+ K GCS++E
Sbjct: 634 QHVAKVAGCSMVE 646
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 224/513 (43%), Gaps = 109/513 (21%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAG------DINYAYLVFTQIKKPNLFIW 55
+ L +IHA + +GL D AASR+L F TS ++++ +F ++ PN F
Sbjct: 18 RHLLQIHAQFLASGLLADAYAASRLLLFTTSATAARLLPHPLHHSLQLFGLVRSPNAFTC 77
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
NT+++ + P L+ M P P T+P L A A G R+G Q+H V
Sbjct: 78 NTLLKAALRQGFPHLCFPLYASM----PAAPDTYTHPLLAAACAARGDVREGLQVHSHSV 133
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG----------- 164
K G + ++ N +++MY+ CG ++ AR +FD +D V+WN+++
Sbjct: 134 KHGFSDNLYLRNALMHMYSACGCVASARRVFD-AGPVWDAVSWNTILATYVRDGDVEQAV 192
Query: 165 --------------------LAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
A+ G ++E+R +FD R+ +W +M+S + RN F E
Sbjct: 193 KVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAMVSCFERNDLFME 252
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
AL +F +M+E+ E MVS++ ACAK G I+ GE H +V V +I
Sbjct: 253 ALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIH 312
Query: 265 MYCKC-------------------------------GCPERALQVFNTVPKKGLSCWNSM 293
MY C G E A +F+ +P K W++M
Sbjct: 313 MYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAM 372
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK---DY------ 344
+ G N +EA+ +F +++ +KPD ++ ++V++AC++ + Q K +Y
Sbjct: 373 IAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQY 432
Query: 345 -FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK---------------LIRSM---- 384
T++ T I +K CM AL +LEE + RS+
Sbjct: 433 NITIVLGTSLIDMYMK-CGCMEAALEVFDMLEEKGTPCWNAVIVGLAMNGLVTRSLDMFS 491
Query: 385 ------PSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ P+ I + +LSACR G +E +Q
Sbjct: 492 EMEATGTAVPNEITFTGVLSACRHGGLVEEGRQ 524
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 174/467 (37%), Positives = 271/467 (58%), Gaps = 36/467 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
MK L+++HAH+I+TGL ++ +I+ FC S G ++YA VF +I+ P+ F+WNT+I
Sbjct: 64 MKHLEQLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMDYALRVFGKIENPDGFLWNTMI 123
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG ++ P A + M V + TY L K QLG G Q+H V+K GL
Sbjct: 124 RGLGRTRQPEKAFEFYKRMQVKGEVL-DNFTYSFLVKVCGQLGSDLLGKQIHCNVLKHGL 182
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E F+ NT+++MY MF + I+ + LF+
Sbjct: 183 EEHVFVRNTLVHMYG----------MFKD----------------------IEAATHLFE 210
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M V+WN++I V ++KEA+ELF M + +KP + T V L+ACA LG +
Sbjct: 211 EMPKSYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDI 270
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G +H+ + V ++IDMY KCG E A ++FN + + + WN+M+ GLAM
Sbjct: 271 GRRVHSCIDHTGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAM 330
Query: 300 NGYENEAIKLFSGLQSSNL-KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G+ +EA++LFS + L P+ ++F+ VL AC+H G V + + YF +M Y I+P+I
Sbjct: 331 HGHGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTI 390
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
KHY MVD LGRAGL+EEA +LI+SMP + ++I+W +LL+ACR HGN+E+A+Q + ++E
Sbjct: 391 KHYGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQXLLE 450
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK-EPGCSLI 464
L+ + S YVL++N+YA++ Q+ + R M ++K +PG S I
Sbjct: 451 LEPDHSSDYVLLANMYASAGQWNKVXRVRKSMHIRGVQKPKPGNSYI 497
>gi|449461643|ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 182/500 (36%), Positives = 282/500 (56%), Gaps = 38/500 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYA-YLVFTQIKKPNLFIWNTIIRG 61
L +IHA ++ +GL D + +L SP+ +++Y L+F WN IIRG
Sbjct: 46 LFEIHAQILVSGLQNDSFFTTELLRVAALSPSRNLSYGCSLLFHCHFHSATMPWNFIIRG 105
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+S S +P+ AI LF +M ++P LT+P L KA A L ++G Q H +K GL+
Sbjct: 106 YSSSDSPQEAISLFGEMR-RRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAIKCGLDL 164
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D ++ NT+IY Y + C + +R++FD+M
Sbjct: 165 DVYVRNTLIYFYGS--------------------------------CKRMSGARKVFDEM 192
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R VSWN++I+ V N F EA++ F +M +P E TMV +L+ACA+LG + G
Sbjct: 193 TERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGR 252
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
W+H+ +V LN + TA +DMY K G A VFN + +K + W++M+ GLA +G
Sbjct: 253 WVHSQVVGRGMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHG 312
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ NEAI+LF+ + SS + P++++FI VL AC+H+G V+++ YF LM Y IKP + HY
Sbjct: 313 FANEAIELFTNMMSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYGIKPMMIHY 372
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK---HGNIEMAKQAAKQIIE 418
MVD LGRAG ++EA +LI SMP +PD I+W +LLSAC +G E+A++A K+++E
Sbjct: 373 GSMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVNGGAEVAEEARKRLLE 432
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ V+++N +A +++A + R MK+ I+K G S IE+ G + +F +G
Sbjct: 433 LEPKRGGNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGESCIELGGSLRKFFSGFD 492
Query: 479 LHPKAPEVYLLLNDLGLLIQ 498
+Y LL+ L L +Q
Sbjct: 493 SRAAPDGIYDLLDGLNLHMQ 512
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 288/499 (57%), Gaps = 2/499 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH K G + A L + + + A +F ++ ++ W T+I G+++
Sbjct: 150 EAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYAR 209
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
P A +F M+V + P +T + A Q+GL G +H +V+ G
Sbjct: 210 GGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVN 269
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ M+ CG ++ A+ +FD + + DV +W SM+ AKCG+++ + +LF ++ +R
Sbjct: 270 LENALVDMFGKCGCVAAAKEVFDGMPIK-DVYSWTSMVSAYAKCGDLENAAKLFKEIPNR 328
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSW+ M++ Y EA+ +F +M ++P + T+VS+L+ACA+L ++ G W++
Sbjct: 329 NVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLY 388
Query: 245 N-FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
+ ++V++ EL + A IDM+ KCG A ++F+ + K + WN+M+ ++G
Sbjct: 389 DTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQP 448
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ LF + + + PD ++I VL+AC+H G V++ + +F M Y I+P +HY+C
Sbjct: 449 EEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYAC 508
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
M+D LG+ GLL+EA ++ RSMP D WG+LL+ACR HGN+E+ K AA ++ LD ++
Sbjct: 509 MIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLAGLDPSD 568
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S YVLMS +YA+ ++ + R +M++ +++K PGCS IEVDG+ HEF+ H +
Sbjct: 569 SGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGCSSIEVDGKCHEFLVADVSHVHS 628
Query: 484 PEVYLLLNDLGLLIQEMGS 502
++Y L ++ L + GS
Sbjct: 629 EDIYAALGNIYLHSKAEGS 647
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 193/430 (44%), Gaps = 69/430 (16%)
Query: 14 TGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQ-IKKPNLFIWNTIIRGFSQSSTPRNA 71
+GLA + ASR+LAFC S + +A V Q + PN ++ T++RGF ++ P +A
Sbjct: 57 SGLASNRFPASRLLAFCALSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHA 116
Query: 72 ILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI-HNTII 130
+ LF +L R +F A + +H K+G + N ++
Sbjct: 117 LTLFRRVLRDRLAVDARTI---VFAVKAAATSSSPTEAIHCVAFKRGFIGQSVLAGNALV 173
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
+MY + L +AR +FDE+ + DVV+W ++I G A+ G DE+ R+F +MV +V W
Sbjct: 174 HMYTSSMLLPDARKLFDEM-ADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESV-W- 230
Query: 191 SMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN 250
P+E T+V+ +A ++G + G +H +V +
Sbjct: 231 ----------------------------PNEVTLVAAASAAGQMGLLGLGRTVHQCIVES 262
Query: 251 CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG--------- 301
++ + A++DM+ KCGC A +VF+ +P K + W SMV A G
Sbjct: 263 GGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLF 322
Query: 302 ----------------------YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+EAI++F+ + ++ ++P + ++VL+AC ++
Sbjct: 323 KEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLD 382
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ ++K++ + + +D + G + A +L +M D + + W +++ A
Sbjct: 383 VGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNM-EDKNVVSWNTMIMA 441
Query: 400 CRKHGNIEMA 409
HG E A
Sbjct: 442 HGLHGQPEEA 451
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 173/465 (37%), Positives = 289/465 (62%), Gaps = 8/465 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+HA +KTG D AS +L T G +++A VF ++ + L +WN ++R + +
Sbjct: 66 RKVHAAAVKTGFRWDAYTASSLLEMYTM-LGRVDFARKVFDEMPQRFLVLWNMMMRCYIR 124
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQ 123
A+ L +M S P R+T + A ++ G G ++ R G+ F
Sbjct: 125 CGRFTAAVALAEEM-ERSGATPDRVTLVTAVTACSRAGDLSLGRRI--RAYMDGVFGFSL 181
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ N ++ MY G+L EA MF ++ E ++++W ++ G A G++D++R LF +
Sbjct: 182 PVANALLDMYTKNGYLEEAVKMFQQM-PERNIISWTILVSGYAVAGQLDKARMLFYQCTQ 240
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
++ + W +MI+ V++ F+EAL LFR+MQ Q ++P +FT+V+LL CA +GA+ QGEWI
Sbjct: 241 KDLILWTAMINACVQHGSFEEALTLFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWI 300
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H + +++ ++ TA+I+MY KCG +++LQ+F + + + W +++ GLA NG
Sbjct: 301 HQYAEGRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQA 360
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
++A++LF +Q S KPD I+FI VL AC H G V++ + +F M E Y+I+P I+HYSC
Sbjct: 361 SKALELFEEMQRSKTKPDGITFIGVLNACCHGGLVDEGRRHFQAMKEIYQIEPRIEHYSC 420
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAI-IWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
+V+ LG AGLL EAEKLIR MP + D + ++G+LL+AC+ +GN+EM+++ K+I + D +
Sbjct: 421 LVNLLGHAGLLYEAEKLIRDMPVNNDTMPLFGALLTACKAYGNVEMSERLTKRIAKEDCS 480
Query: 423 ESCGY-VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
++ VLMSN+YA + ++EE++ R M ++K GCS+IEV
Sbjct: 481 QNPDVNVLMSNVYATASRWEESIRVRSKMTHPAVKKTAGCSMIEV 525
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 164/385 (42%), Gaps = 67/385 (17%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N +IR ++ + + ++ D L + TYP + +A + L+ +G ++H V
Sbjct: 15 NVLIRTLARRGSFARVMAVYYD-LRARGLVADSYTYPFVLRAIGVMKLSVEGRKVHAAAV 73
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G +D + ++++ MY G + AR +FDE+ F +V WN M+ +C
Sbjct: 74 KTGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRF-LVLWNMMM----RC------- 121
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
Y+R +F A+ L EM+ P T+V+ + AC++ G
Sbjct: 122 --------------------YIRCGRFTAAVALAEEMERSGATPDRVTLVTAVTACSRAG 161
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+ G I ++ F + V A++DMY K G E A+++F +P++ + W +V
Sbjct: 162 DLSLGRRIRAYM-DGVFGFSLPVANALLDMYTKNGYLEEAVKMFQQMPERNIISWTILVS 220
Query: 296 GLAMNG---------YE----------------------NEAIKLFSGLQSSNLKPDYIS 324
G A+ G Y+ EA+ LF +Q ++PD +
Sbjct: 221 GYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLFRDMQLQRVEPDKFT 280
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
+ +LT C + G ++Q ++ E +K + +++ + G ++++ ++ M
Sbjct: 281 VVTLLTCCANIGALDQG-EWIHQYAEGRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRM 339
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMA 409
DA W +++ +G A
Sbjct: 340 QGR-DAAAWTAIICGLATNGQASKA 363
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 113/266 (42%), Gaps = 36/266 (13%)
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
N +I R F + ++ +++ + + +T +L A + +G +H V
Sbjct: 15 NVLIRTLARRGSFARVMAVYYDLRARGLVADSYTYPFVLRAIGVMKLSVEGRKVHAAAVK 74
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
F + +++++MY G + A +VF+ +P++ L WN M+ G A+ L
Sbjct: 75 TGFRWDAYTASSLLEMYTMLGRVDFARKVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVAL 134
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
++ S PD ++ + +TAC+ +G ++ + M + S+ + ++D
Sbjct: 135 AEEMERSGATPDRVTLVTAVTACSRAGDLSLGRRIRAYMDGVFGF--SLPVANALLDMYT 192
Query: 370 RAGLLEEAEKLIRSMP------------------------------SDPDAIIWGSLLSA 399
+ G LEEA K+ + MP + D I+W ++++A
Sbjct: 193 KNGYLEEAVKMFQQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINA 252
Query: 400 CRKHGNIEMA----KQAAKQIIELDK 421
C +HG+ E A + Q +E DK
Sbjct: 253 CVQHGSFEEALTLFRDMQLQRVEPDK 278
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 284/500 (56%), Gaps = 36/500 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGD--INYAYLVFTQIKKPNLFIWNTIIRGF 62
K++H+ +I+ GLA D ++ A D ++ + VF Q+ + N+ W II +
Sbjct: 71 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 130
Query: 63 SQSS-TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+QS + AI LF M ++ I+P ++ S+ KA L G Q++ VK G+
Sbjct: 131 AQSGECDKEAIELFCKM-ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIAS 189
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ N++I MYA + G ++++R+ FD +
Sbjct: 190 VNCVGNSLISMYA--------------------------------RSGRMEDARKAFDIL 217
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+N VS+N+++ GY +N+K +EA LF E+ + I S FT SLL+ A +GA+ +GE
Sbjct: 218 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 277
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH L+ ++ N + A+I MY +CG E A QVFN + + + W SM+ G A +G
Sbjct: 278 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 337
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ A+++F + + KP+ I+++AVL+AC+H G +++ + +F M + + I P ++HY
Sbjct: 338 FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY 397
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+CMVD LGR+GLL EA + I SMP DA++W +LL ACR HGN E+ + AA+ I+E +
Sbjct: 398 ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEP 457
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
++ Y+L+SNL+A++ Q+++ ++ R MKE + KE GCS IEV+ VH F G HP
Sbjct: 458 DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHP 517
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
+A ++Y L+ L I+EMG
Sbjct: 518 QAWQIYQELDQLASKIKEMG 537
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 118/212 (55%), Gaps = 13/212 (6%)
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
++FDKM RN V+W MI+ + + ++A++LF +M+ P FT S+L+AC +LG
Sbjct: 6 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC---GCPERALQVFNTVPKKGLSCWNS 292
+ G+ +H+ ++ L+ V +++DMY KC G + + +VF +P+ + W +
Sbjct: 66 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 125
Query: 293 MVFGLAMNGY-ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
++ A +G + EAI+LF + S +++P++ SF +VL AC N + Y +
Sbjct: 126 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG-----NLSDPYTGEQVYS 180
Query: 352 YKIKPSIKHYSCMVDAL----GRAGLLEEAEK 379
Y +K I +C+ ++L R+G +E+A K
Sbjct: 181 YAVKLGIASVNCVGNSLISMYARSGRMEDARK 212
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/501 (35%), Positives = 289/501 (57%), Gaps = 10/501 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAF---CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+K++A + +G+ + + S ++ C + I+ A +F + NL + N +
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYMKCNA----IDVAKRLFDEYGASNLDLCNAMASN 311
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ + R A+ +F ++++ S ++P R++ S + +QL G HG V++ G E
Sbjct: 312 YVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
I N +I MY C A +FD + + VV WNS++ G + GE+D + F+ M
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQG 240
+N VSWN++ISG V+ F+EA+E+F MQ Q + TM+S+ +AC LGA+
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+WI+ ++ N +L+ + T ++DM+ +CG PE A+ +FN++ + +S W + + +AM
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G AI+LF + LKPD ++F+ LTAC+H G V Q K+ F M + + + P H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGRAGLLEEA +LI MP +P+ +IW SLL+ACR GN+EMA AA++I L
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ YVL+SN+YA++ ++ + + RL MKE + K PG S I++ G+ HEF +G H
Sbjct: 670 PERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESH 729
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ P + +L+++ +G
Sbjct: 730 PEMPNIEAMLDEVSQRASHLG 750
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 226/453 (49%), Gaps = 50/453 (11%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAG--DINYAYLVFTQIKK-PNLFIWNT 57
+ +LK H L K GL D ++++A +++A VF + F++N+
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IRG++ S AILLF+ M+ S I P + T+P A A+ +G Q+HG +VK
Sbjct: 105 LIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G D F+ N++++ YA +CGE+D +R++
Sbjct: 164 GYAKDLFVQNSLVHFYA--------------------------------ECGELDSARKV 191
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELF-REMQEQNIKPSEFTMVSLLNACAKLGA 236
FD+M RN VSW SMI GY R K+A++LF R ++++ + P+ TMV +++ACAKL
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLED 251
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ GE ++ F+ + E+N ++V+A++DMY KC + A ++F+ L N+M
Sbjct: 252 LETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN 311
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
G EA+ +F+ + S ++PD IS ++ +++C+ + K Y ++
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS-----CHGYVLRN 366
Query: 357 SIKHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+ + + ++D + + A ++ M S+ + W S+++ ++G ++ A +
Sbjct: 367 GFESWDNICNALIDMYMKCHRQDTAFRIFDRM-SNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+ + E KN ++S L S FEEA+E
Sbjct: 426 FETMPE--KNIVSWNTIISGLVQGSL-FEEAIE 455
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 297/536 (55%), Gaps = 38/536 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++ K++H HL TGL + S L + G A VF ++ NL+ WN ++
Sbjct: 75 LREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLS 134
Query: 61 GFSQSSTPRNAILLFIDM----------LVTSPIQ----PQRLTYPSLFKAYAQLGLARD 106
G+++ + A LF M +V + Q + L + S F+ QLG+ +
Sbjct: 135 GYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFR---QLGIQCN 191
Query: 107 G-------------------AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFD 147
G Q+HG+++ G + + ++++ Y CG + +AR +FD
Sbjct: 192 GFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFD 251
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
E+ DV+AW +M+ G AK G++ + LF +M +N VSW ++ISGY RN +ALE
Sbjct: 252 EMSAR-DVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALE 310
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
LF +M +++P +FT S L ACA + +++ G+ IH +L+ F+ NTIVV+A+IDMY
Sbjct: 311 LFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYS 370
Query: 268 KCGCPERALQVFNTVPKK-GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG +VF+ + K + WN+++ LA +G EAI++ + S KPD I+F+
Sbjct: 371 KCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFV 430
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+L AC+HSG V Q ++F M+ Y I PS +HY+C++D LGRAG EE + MP
Sbjct: 431 VILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPY 490
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
PD +W +LL CR HG+IE+ ++AA+++IEL+ S YVL+S++YA ++E +
Sbjct: 491 KPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKV 550
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMGS 502
R LM E +++KE S +E++ +VH F HP ++Y +L L ++E S
Sbjct: 551 RQLMNERQVKKERAISWLEIENKVHSFSVSDSSHPLKEQIYSVLEQLAGQMEEDAS 606
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 172/361 (47%), Gaps = 34/361 (9%)
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF-DQFIHNTIIYMYANCGFLSEARLMFDE 148
T SL + A R+G ++H + GL+ F+ N +I MYA CG EAR +FD+
Sbjct: 61 TLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDK 120
Query: 149 VDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
+ ++ +WN+M+ G AK G I +R+LFDKM ++ VSWN+M+ + + + EAL
Sbjct: 121 MSAR-NLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRF 179
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
+ E ++ I+ + F+ +L C KL + +H ++ F N ++ ++++D Y K
Sbjct: 180 YSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVK 239
Query: 269 CGCPERALQVFN-------------------------------TVPKKGLSCWNSMVFGL 297
CG A ++F+ +P+K W +++ G
Sbjct: 240 CGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGY 299
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A NG ++A++LF+ + +++PD +F + L AC + K + +P+
Sbjct: 300 ARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRI-NFQPN 358
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
S ++D + G L K+ M + D ++W +++SA +HG E A Q ++
Sbjct: 359 TIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMV 418
Query: 418 E 418
Sbjct: 419 R 419
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 120/277 (43%), Gaps = 37/277 (13%)
Query: 201 KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL-VTNCFELNTIVV 259
K EA+ + + ++ T+ SLL CA A+R+G+ +H L +T T +
Sbjct: 39 KLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLS 98
Query: 260 TAIIDMYCKCGCPERALQV-------------------------------FNTVPKKGLS 288
+I+MY KCG A +V F+ +P+K +
Sbjct: 99 NHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVV 158
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN+MV A GY +EA++ +S + ++ + SF VLT C +V + +
Sbjct: 159 SWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQI 218
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
++ S ++DA + GL+ +A KL M S D + W +++S K G++
Sbjct: 219 L-VAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEM-SARDVLAWTTMVSGYAKWGDM-- 274
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
K A + +E+ + + + + YA + +A+E
Sbjct: 275 -KSANELFVEMPEKNPVSWTALISGYARNGMGHKALE 310
>gi|356567066|ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 488
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/469 (37%), Positives = 277/469 (59%), Gaps = 5/469 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+DLK +HAH +T L + ++ F SP GD+ YA+ +F Q+ P F +NT+I
Sbjct: 20 MRDLKLLHAHAFRTRLHDHTVVLGKLFRFAAVSPLGDLRYAHRMFDQMPHPTTFFYNTLI 79
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R + S+TP + L F +++ + + P + ++ L K+ ++ +HG V+K G
Sbjct: 80 RAHAHSTTPSLSSLSF-NLMRQNNVAPDQFSFNFLLKSRSRTTPLTHHNDVHGAVLKFGF 138
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEV---DTEFDVVAWNSMIIGLAKCGEIDESRR 176
+ N +I+ YAN G AR +F++V E DVV+W+ +++ K GE++ +RR
Sbjct: 139 CRHLHVQNGLIHFYANRGMTLLARRVFEDVLQLGLEVDVVSWSGLLVAHVKAGELEVARR 198
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M R+ VSW +M++GY + + +EALELF EM+ + P E TMVSL++ACA LG
Sbjct: 199 VFDEMPQRDVVSWTAMLTGYSQAKRPREALELFGEMRRSGVWPDEVTMVSLVSACASLGD 258
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G +H F+ N F + A+IDMY KCGC E A +VF+ + +K L WN+MV
Sbjct: 259 METGMMVHRFVEENGFGWMVALCNALIDMYGKCGCLEEAWRVFHGMTRKSLITWNTMVTV 318
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
A G +EA +LF + S + PD ++ +A+L A H G V++ F M Y ++P
Sbjct: 319 CANYGNADEAFRLFEWMVCSGVVPDSVTLLALLVAYAHKGLVDEGIRLFESMDRDYGVEP 378
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
I+HY ++D LGRAG L+EA L+ ++P + +WG+LL ACR HG++EM ++ K++
Sbjct: 379 RIEHYGAVIDMLGRAGRLQEAYDLLTNIPIPCNDAVWGALLGACRIHGDVEMGEKLIKKL 438
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 465
+EL +E Y+L+ ++Y A+ Q EA E R M + K PGCS +E
Sbjct: 439 LELKPDEGGYYILLRDIYVAAGQTVEANETRQAMLASRARKNPGCSWVE 487
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/492 (35%), Positives = 274/492 (55%), Gaps = 10/492 (2%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH L K GL L G +A +F ++ +L + R + S
Sbjct: 32 IHCLLFKAGLLHAGAHLPTALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVSG 91
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG--LAR--DGAQLHGRVVKQGLEFD 122
A+ LF DM+ P + + A G AR G +H +V G+E D
Sbjct: 92 QAAQALDLFQDMIADG-FMPDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPD 150
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ +I +Y G ++ AR +FD + T+ +AWN+M+ + +I+ + RLF M
Sbjct: 151 VFVSTELIRVYGERGEMTVARRVFDSMPTK-STIAWNTMVHQYVRNKDIEAAYRLFLAMP 209
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQN---IKPSEFTMVSLLNACAKLGAIRQ 239
R+ VSWN++I+GY + KEAL LFR+M + + P+ TM ++L+ACA G +
Sbjct: 210 RRDVVSWNTVIAGYCLVGRCKEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLET 269
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLA 298
G W+H ++ N N + +IDMY KCG ++ALQVF P K+ L W +++ GLA
Sbjct: 270 GIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLA 329
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
M+G N+ +++FS +Q S + PD ++F+ VL AC H G V++ +F M E Y+I P I
Sbjct: 330 MHGRANDVLRMFSMMQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFYSMQEKYRITPKI 389
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CM+D LGR G L EA ++I++MP P+ +IWG+ LSAC+ H ++E+ + AA ++
Sbjct: 390 EHYGCMIDLLGRVGRLPEAYRMIQTMPMKPNMVIWGAFLSACKVHSSVELGEIAAAEVTR 449
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD ++ V+MS++YA + + ER M ++++K PGCS + +DGEVHEFVAGG
Sbjct: 450 LDPDDPWARVMMSSMYAKAQDWSGLARERREMNSLQMKKTPGCSSVALDGEVHEFVAGGN 509
Query: 479 LHPKAPEVYLLL 490
HP E+ +L
Sbjct: 510 QHPLCAEICSVL 521
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/510 (35%), Positives = 285/510 (55%), Gaps = 44/510 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +K+IHA ++K L ++ +++A S + A VF QI+ P++ ++NT+IR
Sbjct: 30 LNQVKQIHAQVLKANLHRESFVGQKLIA-AFSLCRQMTLAVNVFNQIQDPDVLLYNTLIR 88
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++S P A +F +M S + TYP L KA + R +H +V K G
Sbjct: 89 AHVRNSEPLLAFSVFFEMQ-DSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFC 147
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ N++I D+ F K GE+ E+RRLFD+
Sbjct: 148 LDIFVPNSLI-------------------DSYF-------------KLGELGEARRLFDE 175
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI----------KPSEFTMVSLLNA 230
M R+TVSWN+++ GYV+ + A ELF +M +N+ K + T++S+L+A
Sbjct: 176 MPERDTVSWNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMEAGLKFDDGTVISILSA 235
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA G + G+ +H + F+ +T V A+IDMY KCG E AL +F+ + +K + W
Sbjct: 236 CAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSW 295
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N+++ GLAM+G+ +A++LFS ++ PD ++F+ VL AC H+G V++ YF M
Sbjct: 296 NAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMER 355
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
Y + P ++HY CMVD LGR G L+EA +L+ SMP +P+AIIWG+LL ACR H +A+
Sbjct: 356 DYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAE 415
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
+ ++++ + ++S ++SN+YAA+ ++ RL MK I+K G S IEVD EV
Sbjct: 416 EVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEV 475
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEM 500
HEF R HPK+ +Y ++ LG I ++
Sbjct: 476 HEFTVFDRSHPKSDRIYKTIDGLGQHINKL 505
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/476 (35%), Positives = 287/476 (60%), Gaps = 15/476 (3%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L + H ++K G + + ++ + G I +A +F ++ + ++ WN +I G+
Sbjct: 182 LGEFHDEIVKGGFESNVFVGNGLVDM-YAKRGCIEFARELFDKMPQRDVVSWNAMIAGYV 240
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
Q+ +A+ LF ++ P+R +T+ ++ YAQ G + +L ++ +Q L
Sbjct: 241 QNGLIEDALKLFQEI-------PKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNL-- 291
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
NT+I Y G + EA +F ++ E +V++WN++I G A+ G+++E+ +LF M
Sbjct: 292 --VSWNTMIAGYVQNGSVKEAFKLF-QIMPERNVISWNAVISGFAQNGQVEEALKLFKTM 348
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
N VSWN+MI+GY +N + + AL+LF +MQ ++KP+ T +L ACA L + QG
Sbjct: 349 PECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGN 408
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
H ++ + F+ + +V ++ MY KCG E A +VF+ + ++ + ++M+ G A+NG
Sbjct: 409 EAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAING 468
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
E+++LF +Q + LKPD ++F+ VL+AC H+G V++ + YF +MT Y I P+++HY
Sbjct: 469 CSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHY 528
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CM+D LGRAG +EA LI MP PDA +WGSLLSACR H NI++ ++ A+ +I L+
Sbjct: 529 GCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNP 588
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
YVL+SN+YAA+ ++++ R MK+ K++K+ GCS I + +VH F+ GG
Sbjct: 589 QNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAFLVGG 644
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 210/416 (50%), Gaps = 21/416 (5%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ D K +HAH+I+T I+ L G + A VF ++ N+ W +I
Sbjct: 80 LPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIA 139
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+++ + A+ F +M IQP T+ S+ A L + + H +VK G E
Sbjct: 140 AYARHEHGQEALGFFYEMQDVG-IQPNHFTFASILPACTDLEVL---GEFHDEIVKGGFE 195
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ F+ N ++ MYA G + AR +FD++ + DVV+WN+MI G + G I+++ +LF +
Sbjct: 196 SNVFVGNGLVDMYAKRGCIEFARELFDKM-PQRDVVSWNAMIAGYVQNGLIEDALKLFQE 254
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ R+ ++WN+M++GY + + A+ELF +M EQN+ S TM++ G ++ G
Sbjct: 255 IPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNL-VSWNTMIA--------GYVQNG 305
Query: 241 EWIHNFLVTNCF-ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
F + E N I A+I + + G E AL++F T+P+ + WN+M+ G +
Sbjct: 306 SVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQ 365
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG A+KLF +Q ++KP+ +F VL AC + Q + ++ + + +
Sbjct: 366 NGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRS-GFQSDVL 424
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSM----PSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ +V + G +E+A K+ M + A+I G ++ C K ++E+ +Q
Sbjct: 425 VGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKE-SLELFEQ 479
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 202/397 (50%), Gaps = 31/397 (7%)
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE-VDT 151
L K+ + G R+ + +V+ G+ +++++ N L +A+L+ + T
Sbjct: 34 GLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQT 93
Query: 152 EF---DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
+F D+ N ++ K G + E+RR+FD+M +N VSW +MI+ Y R+ +EAL
Sbjct: 94 QFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGF 153
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
F EMQ+ I+P+ FT S+L AC L + GE+ H+ +V FE N V ++DMY K
Sbjct: 154 FYEMQDVGIQPNHFTFASILPACTDLEVL--GEF-HDEIVKGGFESNVFVGNGLVDMYAK 210
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
GC E A ++F+ +P++ + WN+M+ G NG +A+KLF + K D I++ +
Sbjct: 211 RGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIP----KRDVITWNTM 266
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
+ G V A + F M E ++ ++ M+ + G ++EA KL + MP +
Sbjct: 267 MAGYAQCGDVENAVELFEKMPEQ-----NLVSWNTMIAGYVQNGSVKEAFKLFQIMP-ER 320
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME--E 446
+ I W +++S ++G +E A + K + E + + M Y+ + Q E A++
Sbjct: 321 NVISWNAVISGFAQNGQVEEALKLFKTMPECN---VVSWNAMIAGYSQNGQAENALKLFG 377
Query: 447 RLLMKEVKIEKE------PGC---SLIEVDGEVHEFV 474
++ M ++K E P C +++E E HE V
Sbjct: 378 QMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVV 414
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 129/291 (44%), Gaps = 17/291 (5%)
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
+ ++ + + +EAL + ++M E I P T SLL C ++ + +H ++
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 250 NCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
FE I + ++ +Y K G A +VF+ +P K + W +M+ A + + EA+
Sbjct: 93 TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152
Query: 309 LFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL 368
F +Q ++P++ +F ++L AC + + D + ++ + +VD
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIV----KGGFESNVFVGNGLVDMY 208
Query: 369 GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYV 428
+ G +E A +L MP D + W ++++ ++G IE A K E+ K + +
Sbjct: 209 AKRGCIEFARELFDKMPQR-DVVSWNAMIAGYVQNGLIE---DALKLFQEIPKRDVITWN 264
Query: 429 LMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
M YA E A+E EK P +L+ + + +V G +
Sbjct: 265 TMMAGYAQCGDVENAVE--------LFEKMPEQNLVSWNTMIAGYVQNGSV 307
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 284/472 (60%), Gaps = 11/472 (2%)
Query: 35 GDINYAYLVFTQIKKPNL----FIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLT 90
G++ A +F Q+++ + WN +I G + +A++LF D+L+ I+P T
Sbjct: 350 GNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEG-IEPDSFT 408
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
S+ +A + R G ++H + +GL+ + F+ ++ MY C + A++ FDE+
Sbjct: 409 LGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEI- 467
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR----NTVSWNSMISGYVRNVKFKEAL 206
+E D WN++I G A+C +I + R L ++M S N +WNS+++G V N ++ A+
Sbjct: 468 SERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAM 527
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
+LF EMQ +++P +T+ +L AC+KL I +G+ +H + + ++ + + ++DMY
Sbjct: 528 QLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMY 587
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG + QV+N + L C N+M+ AM+G+ E I +F + S ++PD+++F+
Sbjct: 588 AKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFL 647
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+VL++C H+G + + F LM ETY I P++KHY+CMVD L RAG L+EA +LI++MP
Sbjct: 648 SVLSSCVHAGSIKIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPM 706
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
+ D++ W +LL C H + + + AA+++IEL+ + + YVL++NLYA++ ++ + +
Sbjct: 707 EADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKT 766
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQ 498
R LM + ++K PGCS IE VH F+A + H + E+Y +L++L I+
Sbjct: 767 RELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFMLDNLTKFIR 818
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 211/499 (42%), Gaps = 57/499 (11%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H+H IKTG +++L S A+ +F ++ NL W ++R
Sbjct: 51 KQLHSHSIKTGFYNHNFVQTKLLQM-YSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLN 109
Query: 65 SSTPRNAILLFIDMLVTSPIQP-QRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+LF + L + +P + LG G Q+HG V+K G +
Sbjct: 110 MGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNV 169
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV- 182
++ N +I MY CG L EA+ + + + T+ D V+WNS+I G + E+ L + M+
Sbjct: 170 YVGNALIDMYGKCGSLDEAKKVLEGM-TQKDCVSWNSIITACVANGVVYEALDLLENMLL 228
Query: 183 ---SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
N V+W+++I G+ N E++ELF M + P T+ S+L AC+++ +
Sbjct: 229 SELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFV 288
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ +H ++V + N V A++ MY +CG + A ++F+ +K + +N+M+ G
Sbjct: 289 GKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLE 348
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG +A +LF ++ ++ D IS
Sbjct: 349 NGNVGKAKELFYQMEQEGVERDRIS----------------------------------- 373
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSM---PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++CM+ + ++A L R + +PD+ GS+L+ I K+
Sbjct: 374 -WNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIA 432
Query: 417 I--ELDKNESCG------YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
I L N G Y +++ AA F+E E I C+ I G
Sbjct: 433 IVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQI---G 489
Query: 469 EVHEFVAGGRLHPKAPEVY 487
++ E V + P VY
Sbjct: 490 KIRELVERMKSDGFEPNVY 508
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 118/293 (40%), Gaps = 74/293 (25%)
Query: 78 MLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCG 137
+L T P+ TY ++ ++ L L G QLH +K G F+ ++ MY+
Sbjct: 26 LLHTPPLTST--TYSTILQSSNSLTL---GKQLHSHSIKTGFYNHNFVQTKLLQMYS--- 77
Query: 138 FLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYV 197
+++ F+ AW+ +FDKM +N SW +++ ++
Sbjct: 78 -----------INSSFED-AWH-----------------MFDKMTLKNLHSWTAVLRLHL 108
Query: 198 RNVKFKEALELFREMQEQNI--KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN 255
F + LF E + K F +LN C LG + G +H ++ + F N
Sbjct: 109 NMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTN 168
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF-------------------- 295
V A+IDMY KCG + A +V + +K WNS++
Sbjct: 169 VYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLL 228
Query: 296 ---------------GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
G + N Y+ E+++LF+ + + + PD + +VL AC+
Sbjct: 229 SELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACS 281
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 176/501 (35%), Positives = 289/501 (57%), Gaps = 10/501 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAF---CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+K++A + +G+ + + S ++ C + I+ A +F + NL + N +
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYMKCNA----IDVAKRLFDEYGASNLDLCNAMASN 311
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ + R A+ +F ++++ S ++P R++ S + +QL G HG V++ G E
Sbjct: 312 YVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
I N +I MY C A +FD + + VV WNS++ G + GE+D + F+ M
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQG 240
+N VSWN++ISG V+ F+EA+E+F MQ Q + TM+S+ +AC LGA+
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+WI+ ++ N +L+ + T ++DM+ +CG PE A+ +FN++ + +S W + + +AM
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G AI+LF + LKPD ++F+ LTAC+H G V Q K+ F M + + + P H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGRAGLLEEA +LI MP +P+ +IW SLL+ACR GN+EMA AA++I L
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ YVL+SN+YA++ ++ + + RL MKE + K PG S I++ G+ HEF +G H
Sbjct: 670 PERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESH 729
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ P + +L+++ +G
Sbjct: 730 PEMPNIEAMLDEVSQRASHLG 750
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 226/453 (49%), Gaps = 50/453 (11%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAG--DINYAYLVFTQIKK-PNLFIWNT 57
+ +LK H L K GL D ++++A +++A VF + F++N+
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IRG++ S AILLF+ M+ S I P + T+P A A+ +G Q+HG +VK
Sbjct: 105 LIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G D F+ N++++ YA +CGE+D +R++
Sbjct: 164 GYAKDLFVQNSLVHFYA--------------------------------ECGELDSARKV 191
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELF-REMQEQNIKPSEFTMVSLLNACAKLGA 236
FD+M RN VSW SMI GY R K+A++LF R ++++ + P+ TMV +++ACAKL
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLED 251
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ GE ++ F+ + E+N ++V+A++DMY KC + A ++F+ L N+M
Sbjct: 252 LETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN 311
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
G EA+ +F+ + S ++PD IS ++ +++C+ + K Y ++
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS-----CHGYVLRN 366
Query: 357 SIKHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+ + + ++D + + A ++ M S+ + W S+++ ++G ++ A +
Sbjct: 367 GFESWDNICNALIDMYMKCHRQDTAFRIFDRM-SNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+ + E KN ++S L S FEEA+E
Sbjct: 426 FETMPE--KNIVSWNTIISGLVQGSL-FEEAIE 455
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 273/504 (54%), Gaps = 45/504 (8%)
Query: 1 MKDLKKIHAHLIKTG--LAKDPIAASRILAFCTSPAGD----INYAYLVFTQIKKPNLFI 54
++ L ++HA +K G L P +R+L CT + + YA VF +I P +
Sbjct: 41 LRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVV 100
Query: 55 W-NTIIRGFSQSST----PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQ 109
W NT++RG+++ A +F+ M+ + P T+ SL KA A +G Q
Sbjct: 101 WYNTLLRGYARGGWGGGCAEEAARVFVRMM-EEGVAPDTYTFVSLLKACASARAGEEGRQ 159
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
HG VK G +++ T+I MYA +CG
Sbjct: 160 AHGVAVKAGAAEHEYVAPTLINMYA--------------------------------ECG 187
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
++ +R +FD+M VS+N+MI+ VR+ EAL LFREMQ + +KP+ T++S+L+
Sbjct: 188 DVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLS 247
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
ACA LGA+ G WIH+++ + V TA+IDMY KCG E A+ VF + +
Sbjct: 248 ACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQA 307
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
W+ M+ A +GY EAI +F ++ +KPD ++F+ VL AC+HSG V++ YF M
Sbjct: 308 WSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR 367
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
E Y I IKHY C+ D L R+G LE A K I +P P AI+W +LLSAC HG+++M
Sbjct: 368 E-YGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMG 426
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGE 469
K+ ++I+ELD + YV+ SNL A + ++EE R LM E + K PGCS IE+D
Sbjct: 427 KRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNM 486
Query: 470 VHEFVAGGRLHPKAPEVYLLLNDL 493
VHEF AG HP + E +++++
Sbjct: 487 VHEFFAGDGSHPHSQEARRMVDEV 510
>gi|115446651|ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|46389885|dbj|BAD15486.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza sativa Japonica Group]
gi|125582482|gb|EAZ23413.1| hypothetical protein OsJ_07107 [Oryza sativa Japonica Group]
gi|215712305|dbj|BAG94432.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 586
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/380 (41%), Positives = 239/380 (62%), Gaps = 4/380 (1%)
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N+++ +Y + G L AR + DVV+WN+M+ G K G++ +R +F +M R
Sbjct: 115 VTNSLLKLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPER 174
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSW++M+ VR +F EAL +F M + +P +VS+L ACA LGA+ +G W+H
Sbjct: 175 NLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVH 234
Query: 245 NFLVTNCF---ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+L T F N ++ TA++DMYCKCGC E A QVF+ V ++ + WN+M+ GLAMNG
Sbjct: 235 RYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNG 294
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
Y A++LF + P+ +FIAVL AC H+G+V++ K F M + Y IKP +HY
Sbjct: 295 YGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD-YGIKPQREHY 353
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
C+ D LGRAG +EEAE L+ MP +P A WG+L+S+C+ H +I + ++ K++IEL+
Sbjct: 354 GCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEP 413
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ YV++ NLYA + ++EEA R +M++ +KE G S IE++G VHEF++G HP
Sbjct: 414 YDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHP 473
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
++Y LL D+ +Q +G
Sbjct: 474 LTRKIYALLEDIERRLQLIG 493
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
GD+ A VF ++ + NL W+ ++ ++ A+ +F D ++ +P + S
Sbjct: 158 GGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVF-DRMMREEFRPDVVVLVS 216
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQ----GLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
+ KA A LG G +H R ++ G + + ++ MY CG + +A +FD V
Sbjct: 217 VLKACAHLGAVERGRWVH-RYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGV 275
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR----NTVSWNSMISGYVRNVKFKEA 205
DVV WN+MI GLA G + + LF +M+ + N ++ +++ + E
Sbjct: 276 HRR-DVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEG 334
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+F+ MQ+ IKP L + + G + + E
Sbjct: 335 KRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEEAE 370
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/492 (33%), Positives = 285/492 (57%), Gaps = 2/492 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH K G + A L + + + A +F ++ ++ W T+I G+++
Sbjct: 150 EAIHCVAFKRGFIGQSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYAR 209
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
P A +F M+V + P +T + A Q+GL G +H +V+ G
Sbjct: 210 GGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVN 269
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ M+ CG ++ A+ +FD + + DV +W SM+ AKCG+++ + +LF ++ +R
Sbjct: 270 LENALVDMFGKCGCVAAAKEVFDGMPIK-DVYSWTSMVSAYAKCGDLENAAKLFKEIPNR 328
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSW+ M++ Y EA+ +F +M ++P + T+VS+L+ACA+L ++ G W++
Sbjct: 329 NVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLY 388
Query: 245 N-FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
+ ++V++ EL + A IDM+ KCG A ++F+ + K + WN+M+ ++G
Sbjct: 389 DTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQP 448
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ LF + + + PD ++I VL+AC+H G V++ + +F M Y I+P +HY+C
Sbjct: 449 EEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYAC 508
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
M+D LG+ GLL+EA ++ RSMP D WG+LL+ACR HGN+E+ K AA ++ LD ++
Sbjct: 509 MIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLAGLDPSD 568
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S YVLMS +YA+ ++ + R +M++ +++K PGCS IEVDG+ HEF+ H +
Sbjct: 569 SGIYVLMSQIYASKSKWGQVKMLRTVMRDRRVKKNPGCSSIEVDGKCHEFLVADVSHVHS 628
Query: 484 PEVYLLLNDLGL 495
++Y L ++ L
Sbjct: 629 EDIYAALGNIYL 640
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 193/430 (44%), Gaps = 69/430 (16%)
Query: 14 TGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKK-PNLFIWNTIIRGFSQSSTPRNA 71
+GLA + ASR+LAFC S + +A V Q + PN ++ T++RGF ++ P +A
Sbjct: 57 SGLASNRFPASRLLAFCALSDPPRLAHAAAVLAQCTEGPNAYMLATMMRGFLRAGKPTHA 116
Query: 72 ILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH-NTII 130
+ LF +L R +F A + +H K+G + N ++
Sbjct: 117 LTLFRRVLRDRLAVDARTI---VFAVKAAATSSSPTEAIHCVAFKRGFIGQSVLAGNALV 173
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
+MY + L +AR +FDE+ + DVV+W ++I G A+ G DE+ R+F +MV +V W
Sbjct: 174 HMYTSSMLLPDARKLFDEM-ADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESV-W- 230
Query: 191 SMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN 250
P+E T+V+ +A ++G + G +H +V +
Sbjct: 231 ----------------------------PNEVTLVAAASAAGQMGLLGLGRTVHQCIVES 262
Query: 251 CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG--------- 301
++ + A++DM+ KCGC A +VF+ +P K + W SMV A G
Sbjct: 263 GGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLF 322
Query: 302 ----------------------YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+EAI++F+ + ++ ++P + ++VL+AC ++
Sbjct: 323 KEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLD 382
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ ++K++ + + +D + G + A +L +M D + + W +++ A
Sbjct: 383 VGTWLYDTYIVSHKVELTPNLSNAFIDMFAKCGDVGAASRLFSNM-EDKNVVSWNTMIMA 441
Query: 400 CRKHGNIEMA 409
HG E A
Sbjct: 442 HGLHGQPEEA 451
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 281/488 (57%), Gaps = 16/488 (3%)
Query: 20 PIAASRILAFCTSPAGDINYAYLVFTQIKKPN----LFIWNTIIRGFSQSSTPRNAILLF 75
P++ L F SP N + + PN + +W + + + ++ A F
Sbjct: 25 PLSNPTKLNFPRSP----NSPHRNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEF 80
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARD--GAQLHGRVVKQGLEFDQFIHNT-IIYM 132
M + ++P +T+ +L A A + LHG K GL+ + T +I M
Sbjct: 81 TRMRLAG-VEPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDM 139
Query: 133 YANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
Y+ C L AR +F + + + V+WN+M+ G + GEI+ + +LFD+M +R+ +SW ++
Sbjct: 140 YSKCAQLGHARKVFYNLGVK-NSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTAL 198
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
I+G +++ ++ALE F +MQ + +++++L ACA LGA+ G W+H F++ F
Sbjct: 199 INGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEF 258
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
+ N + ++IDMY +CGC E A QVF + K+ L WNS++ G A+NG+ +E+++ F
Sbjct: 259 KDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFXA 318
Query: 313 LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAG 372
+Q KPD +S+ LTAC+H+G VN+ + F M +KI P I+HY C+VD GRAG
Sbjct: 319 MQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAG 378
Query: 373 LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSN 432
LE+A +I MP P+ ++ GSLL+ACR HG++ +A++ K + +LD YVL+SN
Sbjct: 379 RLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSN 438
Query: 433 LYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLND 492
+YAA +++ A R MK ++K+PG S +E+DG+VHEFVAG H A +Y +L+
Sbjct: 439 IYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDNYHADADNIYSMLD- 497
Query: 493 LGLLIQEM 500
LL E+
Sbjct: 498 --LLCHEL 503
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 151/410 (36%), Gaps = 101/410 (24%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL + L S + +A VF + N WNT++ GF ++
Sbjct: 116 LHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNG 175
Query: 67 TPRNAILLFIDMLVTSPI-----------------------QPQR-------LTYPSLFK 96
AI LF +M I Q QR ++ ++
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLA 235
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A LG G +H V+ Q + + I N++I MY+ CG + AR +F ++ + +V
Sbjct: 236 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKM-AKRTLV 294
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G DES LE F MQ++
Sbjct: 295 SWNSIIVGFAVNGFADES-------------------------------LEFFXAMQKEG 323
Query: 217 IKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
KP + L AC+ G + +G E N + I+D+Y + G E A
Sbjct: 324 FKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDA 383
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
L + +P +KP+ + ++L AC
Sbjct: 384 LNMIEEMP----------------------------------MKPNEVVLGSLLAACRTH 409
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA-GLLEEAEKLIRSM 384
G VN A+ LM +K+ P Y ++ + A G + A + R+M
Sbjct: 410 GDVNLAE---RLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTM 456
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 283/500 (56%), Gaps = 36/500 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGD--INYAYLVFTQIKKPNLFIWNTIIRGF 62
K++H+ +I+ GLA D ++ A D ++ + VF Q+ + N+ W II +
Sbjct: 251 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 310
Query: 63 SQSS-TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
QS + AI LF M ++ I+P ++ S+ KA L G Q++ VK G+
Sbjct: 311 VQSGECDKEAIELFCKM-ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIAS 369
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ N++I MYA + G ++++R+ FD +
Sbjct: 370 VNCVGNSLISMYA--------------------------------RSGRMEDARKAFDIL 397
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+N VS+N+++ GY +N+K +EA LF E+ + I S FT SLL+ A +GA+ +GE
Sbjct: 398 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 457
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH L+ ++ N + A+I MY +CG E A QVFN + + + W SM+ G A +G
Sbjct: 458 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 517
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ A+++F + + KP+ I+++AVL+AC+H G +++ + +F M + + I P ++HY
Sbjct: 518 FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY 577
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+CMVD LGR+GLL EA + I SMP DA++W +LL ACR HGN E+ + AA+ I+E +
Sbjct: 578 ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEP 637
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
++ Y+L+SNL+A++ Q+++ ++ R MKE + KE GCS IEV+ VH F G HP
Sbjct: 638 DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHP 697
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
+A ++Y L+ L I+EMG
Sbjct: 698 QAWQIYQELDQLASKIKEMG 717
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 204/418 (48%), Gaps = 42/418 (10%)
Query: 7 IHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
I+ ++KTG L D ++ +GD+ AY VF ++ + NL W +I F+Q
Sbjct: 150 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL 209
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
R+AI LF+DM ++ + P R TY S+ A +LGL G QLH RV++ GL D +
Sbjct: 210 GCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCV 268
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+++ MYA C A G +D+SR++F++M N
Sbjct: 269 GCSLVDMYAKC-----------------------------AADGSVDDSRKVFEQMPEHN 299
Query: 186 TVSWNSMISGYVRNVKF-KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+SW ++I+ YV++ + KEA+ELF +M +I+P+ F+ S+L AC L GE ++
Sbjct: 300 VMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 359
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ V V ++I MY + G E A + F+ + +K L +N++V G A N
Sbjct: 360 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 419
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA LF+ + + + +F ++L+ G + + + + +K K C+
Sbjct: 420 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL-----LKGGYKSNQCI 474
Query: 365 VDAL----GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+AL R G +E A ++ M D + I W S+++ KHG A + +++E
Sbjct: 475 CNALISMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHGFATRALEMFHKMLE 531
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 184/386 (47%), Gaps = 50/386 (12%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQI-KKPNLFIWNTIIRGFS 63
K +H L+++GL D + + +++ S GD A L+F + K +L W+ ++ F+
Sbjct: 46 KLVHRKLMQSGLELDSVVLNTLISL-YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFA 104
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFD 122
+S AI F+DML P + ++ +A + A G ++G VVK G LE D
Sbjct: 105 NNSMEWQAIWTFLDMLELG-FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEAD 163
Query: 123 QFIHNTIIYMYA-NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ +I M+ G L A +FD++ E ++V W MI A+ G
Sbjct: 164 VCVGCELIDMFVKGSGDLGSAYKVFDKM-PERNLVTWTLMITRFAQLGCA---------- 212
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++A++LF +M+ P FT S+L+AC +LG + G+
Sbjct: 213 ---------------------RDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 251
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKC---GCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+H+ ++ L+ V +++DMY KC G + + +VF +P+ + W +++
Sbjct: 252 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYV 311
Query: 299 MNGY-ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
+G + EAI+LF + S +++P++ SF +VL AC N + Y +Y +K
Sbjct: 312 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG-----NLSDPYTGEQVYSYAVKLG 366
Query: 358 IKHYSCMVDAL----GRAGLLEEAEK 379
I +C+ ++L R+G +E+A K
Sbjct: 367 IASVNCVGNSLISMYARSGRMEDARK 392
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 162/353 (45%), Gaps = 52/353 (14%)
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
+D++ P TY L K+ + + G +H ++++ GLE D + NT+I +Y+
Sbjct: 14 LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 73
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
CG ARL+F+ + + D+V+W++M+ A N++ W
Sbjct: 74 CGDTETARLIFEGMGNKRDLVSWSAMVSCFAN-----------------NSMEW------ 110
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV-TNCFEL 254
+A+ F +M E P+E+ +++ AC+ GE I+ F+V T E
Sbjct: 111 --------QAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEA 162
Query: 255 NTIVVTAIIDMYCK-CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL 313
+ V +IDM+ K G A +VF+ +P++ L W M+ A G +AI LF +
Sbjct: 163 DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 222
Query: 314 QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC----MVDALG 369
+ S PD ++ +VL+AC G + K + + I+ + C +VD
Sbjct: 223 ELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRV-----IRLGLALDVCVGCSLVDMYA 277
Query: 370 RA---GLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
+ G ++++ K+ MP + + + W ++++A + G + K+ IEL
Sbjct: 278 KCAADGSVDDSRKVFEQMP-EHNVMSWTAIITAYVQSGECD------KEAIEL 323
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/460 (36%), Positives = 265/460 (57%), Gaps = 4/460 (0%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +IH H ++ GL + + ++ C S + YA +F PN+ ++N II+ S
Sbjct: 24 LTEIHGHFLRHGLQQSNQILAHFVSVCASLR-RVPYATRLFAHTHNPNILLFNAIIKAHS 82
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
P +A F ++ T I P T LFK+ + L G +H VV+ G
Sbjct: 83 LHP-PFHASFSFFSLMKTRAISPDEYTLAPLFKSASNLRYYVLGGCVHAHVVRLGFTRHA 141
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ + +YA+C + +A +FDE+ + DVV WN MI G K G+++ ++F +M
Sbjct: 142 SVRVAALEVYASCERMGDASKVFDEM-RDPDVVVWNLMIRGFCKMGDLETGMKVFGQMKE 200
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R VSWN M+S +N K ++ALELF EM EQ +P + ++V++L CA+LGA+ GEWI
Sbjct: 201 RTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTVLPVCARLGAVDIGEWI 260
Query: 244 HNFLVTNCFELNTI-VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
H++ + F +TI V +++D YCKCG + A +FN + K + WN+M+ GLA NG
Sbjct: 261 HSYANSKGFLQDTINVGNSLVDFYCKCGNLQAAWSIFNDMASKNVVSWNAMISGLAYNGE 320
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+ LF + +P+ +F+ VL C H G V++ +D F M+ +K+ P ++HY
Sbjct: 321 GEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLFASMSVKFKVSPKLEHYG 380
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C+VD LGR G + EA LI SMP P A +WG+LLSACR +G+ E+A+ AAK+++ L+
Sbjct: 381 CVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTYGDREIAENAAKELVRLEPW 440
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS 462
S YVL+SN+YA +++E + R+LM+ ++K PG S
Sbjct: 441 NSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGVKKVPGQS 480
>gi|125539857|gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
Length = 629
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 239/380 (62%), Gaps = 4/380 (1%)
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N+++ +Y + G + AR + DVV+WN+M+ G K G++ +R +F +M R
Sbjct: 115 VTNSLLKLYCSLGLIDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPER 174
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSW++M+ VR +F EAL +F M + +P +VS+L ACA LGA+ +G W+H
Sbjct: 175 NLVSWSAMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVH 234
Query: 245 NFLVTNCF---ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+L T F N ++ TA++DMYCKCGC E A QVF+ V ++ + WN+M+ GLAMNG
Sbjct: 235 RYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNG 294
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
Y A++LF + P+ +FIAVL AC H+G+V++ K F M + Y IKP +HY
Sbjct: 295 YGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQD-YGIKPQREHY 353
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
C+ D LGRAG +EEAE L+ MP +P A WG+L+S+C+ H +I + ++ K++IEL+
Sbjct: 354 GCLADLLGRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEP 413
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ YV++ NLYA + ++EEA R +M++ +KE G S IE++G VHEF++G HP
Sbjct: 414 YDGGRYVVLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHP 473
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
++Y LL D+ +Q +G
Sbjct: 474 LTRKIYALLEDIERRLQLIG 493
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
GD+ A VF ++ + NL W+ ++ ++ A+ +F D ++ +P + S
Sbjct: 158 GGDLGAAREVFARMPERNLVSWSAMVDACVRAGEFGEALWVF-DRMMREEFRPDVVVLVS 216
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQ----GLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
+ KA A LG G +H R ++ G + + ++ MY CG + +A +FD V
Sbjct: 217 VLKACAHLGAVERGRWVH-RYLETGSFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGV 275
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR----NTVSWNSMISGYVRNVKFKEA 205
DVV WN+MI GLA G + + LF +M+ + N ++ +++ + E
Sbjct: 276 HRR-DVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEG 334
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+F+ MQ+ IKP L + + G + + E
Sbjct: 335 KRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEEAE 370
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/492 (35%), Positives = 287/492 (58%), Gaps = 6/492 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ + +IH H I TG + ++ + AY VF Q+ P+ +N +I
Sbjct: 143 LSQVMQIHCHAIITGSFYYGYLQNTLMKIYLENE-KMGLAYQVFQQMAAPDAVSFNIMIF 201
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL- 119
G+++ A L F+ +V ++P T L +LG A+ G +H + ++GL
Sbjct: 202 GYAKKGHNIEA-LKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLI 260
Query: 120 -EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ ++N ++ MY C L A+ +F+ V D ++WN+MI G AK G ++ + F
Sbjct: 261 KSSNLILNNALLDMYVKCKELRIAQSIFN-VIVRKDTISWNTMIAGYAKVGNLEIAHNFF 319
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+ M R+ VSWNS+I+GY + LF M +NI P T+++L++A A++GA+
Sbjct: 320 EDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALH 379
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G WIH ++V +++ + +A IDMY KCG +RA VF V +K ++ W +M+ G A
Sbjct: 380 HGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREVTEKDVTVWTTMITGFA 439
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+GY ++A++LF +Q + P+ ++F+AVLTAC+HSG V+Q F M E Y I+P +
Sbjct: 440 FHGYGSKALQLFYEMQEY-VMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGV 498
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C+VD LGR+G E + +I MP P IWG++LSACR +GNIE+A+ A K++++
Sbjct: 499 EHYGCLVDLLGRSGRFSEVKDVIEMMPMKPSRSIWGAVLSACRAYGNIEIAEIAGKELLK 558
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ + GYVL+SN+YA S +++ + + R +M+ ++K GCS + VDG +HEFVA +
Sbjct: 559 LEPEKEGGYVLLSNIYATSGRWKHSDKIREIMESRGVKKTAGCSSVVVDGIIHEFVAADK 618
Query: 479 LHPKAPEVYLLL 490
HP+ E+ +L
Sbjct: 619 RHPRWIEIQSIL 630
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 188/439 (42%), Gaps = 81/439 (18%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFC--TSPAGDINYAYLVFTQ-IKKPNLFIWNTIIR 60
K+I A +++ L SR++ F T P +++ A L+F PNL+I+NT+I
Sbjct: 47 FKQILAQIMRINLIGQTFPMSRLILFSAITHPE-NLDMAVLLFRHHTPHPNLYIYNTMIS 105
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S S N F + L++S I P R T+ L +A L Q+H + G
Sbjct: 106 ALSLS---LNQSFAFYNSLLSSCIYPNRSTFLFLLQASKFLSQV---MQIHCHAIITGSF 159
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ ++ NT++ +Y + A +F ++ D V++N MI G AK G
Sbjct: 160 YYGYLQNTLMKIYLENEKMGLAYQVFQQMAAP-DAVSFNIMIFGYAKKGH---------- 208
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
N+ EAL+ EM +KP EFTM+ LL C +LG + G
Sbjct: 209 ------------------NI---EALKFLHEMVGLGLKPDEFTMLGLLICCGRLGDAQLG 247
Query: 241 EWIHNFLVTNCF--ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+ +H ++ N I+ A++DMY KC A +FN + +K WN+M+ G A
Sbjct: 248 KSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVRKDTISWNTMIAGYA 307
Query: 299 --------------------------MNGYENEA-----IKLFSGLQSSNLKPDYISFIA 327
+ GY + +LF + + N+ PD+++ I
Sbjct: 308 KVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIWPDFVTIIN 367
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLEEAEKLIRSMP 385
+++A G ++ + + +++ I + S +D + G ++ A + R +
Sbjct: 368 LVSAAAEIGALHHGR---WIHGWVVRMQMKIDAFLGSAFIDMYWKCGSIKRACMVFREV- 423
Query: 386 SDPDAIIWGSLLSACRKHG 404
++ D +W ++++ HG
Sbjct: 424 TEKDVTVWTTMITGFAFHG 442
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 294/567 (51%), Gaps = 76/567 (13%)
Query: 6 KIHAHLIKTG-LAKDPIAASR--ILAFCTSPAG----DINYAYLVFTQIKKPNLFIWNTI 58
+ HA L+ +G LA P+ S +LA + P+ D+ +A L + P F WNT
Sbjct: 28 QCHALLLTSGHLAASPLRLSNHLLLALASVPSAAALADVVFARLPLPAARDP--FAWNTA 85
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IR + PR A+L F M ++P T+P++ KA R G +H V++G
Sbjct: 86 IR-LHAPARPRAALLYFARMRRCG-VRPDAYTFPAVLKACGCAPGCRAGLLVHAEAVRRG 143
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVD-TEFDVVAWNSMIIGLAKCGE------- 170
L D F N +I Y + R +FDE D+V+WNSM+ G CGE
Sbjct: 144 LAADLFTVNALISFYCRILDIRSGRKVFDEAGGVSRDLVSWNSMVAGYVGCGEMGLAQEM 203
Query: 171 --------------------------IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+D +R LFD+M R+ V WNSMI GY R+ + E
Sbjct: 204 FDEMPQKDTFSWATLIDGYGKQGGAGVDRARELFDQMPERDLVCWNSMIDGYARHGRMDE 263
Query: 205 ALELFREMQEQNI-------------------------------KPSEFTMVSLLNACAK 233
A LF EM E+N+ +P V ++ACA+
Sbjct: 264 ARSLFEEMPERNVISWSIVIDGHVSCGEAKEALEYFQSMLRCGLRPDRIAAVGAVSACAQ 323
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LGA+ QG W+H++L + +V TA+IDMY KCGC + A+ +F ++ ++ + WN M
Sbjct: 324 LGALEQGRWLHSYLEKKKLLSDVVVQTALIDMYVKCGCLDLAMLIFESMAERSVVTWNVM 383
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ GL +G+ +A+ LF +++ ++ D +S + +LTAC H+G V++ + F M + +
Sbjct: 384 IVGLGTHGFGLDAVTLFHRMEAESVAVDDLSVLGMLTACTHAGLVSEGLEIFHRMKKDFG 443
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
I P ++HY +VD LGRAG L++A I +MP +P +WGSLL+ACR H +E+A+ +
Sbjct: 444 IDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAACRSHSCVELAELSV 503
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
+++ +L ++S YVL+SN+YA + + + R LM + + K+ G S+IEVDGE+HEF
Sbjct: 504 ERLADLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEF 563
Query: 474 VAGGRLHPKAPEVYLLLNDLGLLIQEM 500
V G + E+YL+L +L ++ +
Sbjct: 564 VNGVGSYICKDEMYLMLWNLSNMVASI 590
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 283/500 (56%), Gaps = 36/500 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGD--INYAYLVFTQIKKPNLFIWNTIIRGF 62
K++H+ +I+ GLA D ++ A D ++ + VF Q+ + N+ W II +
Sbjct: 269 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 328
Query: 63 SQSS-TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
QS + AI LF M ++ I+P ++ S+ KA L G Q++ VK G+
Sbjct: 329 VQSGECDKEAIELFCKM-ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIAS 387
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ N++I MYA + G ++++R+ FD +
Sbjct: 388 VNCVGNSLISMYA--------------------------------RSGRMEDARKAFDIL 415
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+N VS+N+++ GY +N+K +EA LF E+ + I S FT SLL+ A +GA+ +GE
Sbjct: 416 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 475
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH L+ ++ N + A+I MY +CG E A QVFN + + + W SM+ G A +G
Sbjct: 476 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 535
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ A+++F + + KP+ I+++AVL+AC+H G +++ + +F M + + I P ++HY
Sbjct: 536 FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY 595
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+CMVD LGR+GLL EA + I SMP DA++W +LL ACR HGN E+ + AA+ I+E +
Sbjct: 596 ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEP 655
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
++ Y+L+SNL+A++ Q+++ ++ R MKE + KE GCS IEV+ VH F G HP
Sbjct: 656 DDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHP 715
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
+A ++Y L+ L I+EMG
Sbjct: 716 QAWQIYQELDQLASKIKEMG 735
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 204/418 (48%), Gaps = 42/418 (10%)
Query: 7 IHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
I+ ++KTG L D ++ +GD+ AY VF ++ + NL W +I F+Q
Sbjct: 168 IYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQL 227
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
R+AI LF+DM ++ + P R TY S+ A +LGL G QLH RV++ GL D +
Sbjct: 228 GCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCV 286
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+++ MYA C A G +D+SR++F++M N
Sbjct: 287 GCSLVDMYAKC-----------------------------AADGSVDDSRKVFEQMPEHN 317
Query: 186 TVSWNSMISGYVRNVKF-KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+SW ++I+ YV++ + KEA+ELF +M +I+P+ F+ S+L AC L GE ++
Sbjct: 318 VMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 377
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ V V ++I MY + G E A + F+ + +K L +N++V G A N
Sbjct: 378 SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 437
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA LF+ + + + +F ++L+ G + + + + +K K C+
Sbjct: 438 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL-----LKGGYKSNQCI 492
Query: 365 VDAL----GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+AL R G +E A ++ M D + I W S+++ KHG A + +++E
Sbjct: 493 CNALISMYSRCGNIEAAFQVFNEM-EDRNVISWTSMITGFAKHGFATRALEMFHKMLE 549
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 184/386 (47%), Gaps = 50/386 (12%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQI-KKPNLFIWNTIIRGFS 63
K +H L+++GL D + + +++ S GD A L+F + K +L W+ ++ F+
Sbjct: 64 KLVHRKLMQSGLELDSVVLNTLISL-YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFA 122
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFD 122
+S AI F+DML P + ++ +A + A G ++G VVK G LE D
Sbjct: 123 NNSMEWQAIWTFLDMLELG-FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEAD 181
Query: 123 QFIHNTIIYMYA-NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ +I M+ G L A +FD++ E ++V W MI A+ G
Sbjct: 182 VCVGCELIDMFVKGSGDLGSAYKVFDKM-PERNLVTWTLMITRFAQLGCA---------- 230
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++A++LF +M+ P FT S+L+AC +LG + G+
Sbjct: 231 ---------------------RDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 269
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKC---GCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+H+ ++ L+ V +++DMY KC G + + +VF +P+ + W +++
Sbjct: 270 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYV 329
Query: 299 MNGY-ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
+G + EAI+LF + S +++P++ SF +VL AC N + Y +Y +K
Sbjct: 330 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG-----NLSDPYTGEQVYSYAVKLG 384
Query: 358 IKHYSCMVDAL----GRAGLLEEAEK 379
I +C+ ++L R+G +E+A K
Sbjct: 385 IASVNCVGNSLISMYARSGRMEDARK 410
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 162/353 (45%), Gaps = 52/353 (14%)
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
+D++ P TY L K+ + + G +H ++++ GLE D + NT+I +Y+
Sbjct: 32 LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 91
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
CG ARL+F+ + + D+V+W++M+ A N++ W
Sbjct: 92 CGDTETARLIFEGMGNKRDLVSWSAMVSCFAN-----------------NSMEW------ 128
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV-TNCFEL 254
+A+ F +M E P+E+ +++ AC+ GE I+ F+V T E
Sbjct: 129 --------QAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEA 180
Query: 255 NTIVVTAIIDMYCK-CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL 313
+ V +IDM+ K G A +VF+ +P++ L W M+ A G +AI LF +
Sbjct: 181 DVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 240
Query: 314 QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC----MVDALG 369
+ S PD ++ +VL+AC G + K + + I+ + C +VD
Sbjct: 241 ELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRV-----IRLGLALDVCVGCSLVDMYA 295
Query: 370 RA---GLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
+ G ++++ K+ MP + + + W ++++A + G + K+ IEL
Sbjct: 296 KCAADGSVDDSRKVFEQMP-EHNVMSWTAIITAYVQSGECD------KEAIEL 341
>gi|357477567|ref|XP_003609069.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510124|gb|AES91266.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 611
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/509 (35%), Positives = 282/509 (55%), Gaps = 25/509 (4%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD--INYAYLVFTQIKKPNLFIWNTI 58
+K K+IH HL TGL P ++L C D +NY+ +F P+ F++NT+
Sbjct: 23 LKTTKQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLNYSLRLFHHFPNPDTFMYNTL 82
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLA-RDGAQLHGRVVKQ 117
IR S SSTP +++ FI +L + P ++ K A G + R G QLH +
Sbjct: 83 IRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKRQGIQLHSHAFRH 142
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG-------E 170
G + F+ T+I MYA CG AR +FDE+ ++ +VVAWN+++ +CG
Sbjct: 143 GFDDHIFVGTTLISMYAECGCYEYARKVFDEM-SQPNVVAWNAVVTACFRCGMWRVLGVS 201
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
+F +M R+ SW++MI G+ ++ F +A F+E+ +PSE ++ +L+A
Sbjct: 202 FGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSA 261
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA+ GA G+ +H F+ F V A+ID Y KCG + A VFN
Sbjct: 262 CAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFN---------- 311
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
LAM+G +EAI++F ++ S ++PD ++FI++L AC+HSG V Q F+ M
Sbjct: 312 ----ISLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRN 367
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
Y I+P+I+HY CMVD GRA L++A + IR MP P+ IIW +LL AC HGNIE+A+
Sbjct: 368 FYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHGNIELAE 427
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
++ E+D N S +VL+SN+YA + ++++ R M E ++K PG S+IE+D
Sbjct: 428 LVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIPGWSMIEIDKVN 487
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQE 499
+ FVAG + + E + L ++ L ++E
Sbjct: 488 YGFVAGEKPNEVTKEAHDKLREIMLRLRE 516
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/418 (38%), Positives = 261/418 (62%), Gaps = 1/418 (0%)
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR 143
+ P T + KA +L +G +HG K G + F+ N I+ +Y CG + +A
Sbjct: 6 VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 144 LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
L+F+++ + D V WN +I LAK G+ID + F +M ++N SW SMISG+V+ K
Sbjct: 66 LLFEKM-PQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPN 124
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
EA++LF +++++ ++P+E T+VS+L ACA LG + G +H + + F+ N V +I
Sbjct: 125 EAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLI 184
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY KCGC E A +VF + ++ + W++M+ GLAM+G EA+ LFS + +KP+ +
Sbjct: 185 DMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGV 244
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+FI +L AC+H G +++ + +F MT Y + P I+HY C+VD RAGLLEEA + I S
Sbjct: 245 TFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILS 304
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
MP P+ ++WG+LL C+ H NI++A++A K + ELD YV++SN+YA + ++E+A
Sbjct: 305 MPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDA 364
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R LMK+ ++K G S I V+G VHEFVAG + HP+A ++ + + L + ++ G
Sbjct: 365 ARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRG 422
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 142/356 (39%), Gaps = 84/356 (23%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII----- 59
K IH K G + + IL G++ A L+F ++ + + WN +I
Sbjct: 30 KTIHGLFQKLGFGSNLFLQNMILNL-YGLCGEMGDAMLLFEKMPQRDAVTWNIVIAQLAK 88
Query: 60 --------------------------RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
GF Q P AI LF+ L ++P +T S
Sbjct: 89 RGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMK-LEDEAVRPNEVTVVS 147
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ A A LG G +H K G + + + NT+I MY CG L AR +F E++ E
Sbjct: 148 VLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEME-ER 206
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
VV+W++MI GLA G+ + EAL LF EM
Sbjct: 207 TVVSWSAMIAGLAMHGQAE-------------------------------EALCLFSEMI 235
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV----VTAIIDMYCKC 269
+ +KP+ T + LL+AC+ +G I +G F + + I ++D++ +
Sbjct: 236 KLGVKPNGVTFIGLLHACSHMGLIDEGR---RFFASMTADYGVIPQIEHYGCVVDLFSRA 292
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE--------NEAIKLFSGLQSSN 317
G E A + ++P K N +V+G + G + EAIK S L N
Sbjct: 293 GLLEEAHEFILSMPIKP----NGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLN 344
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 34/258 (13%)
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG- 270
M+ ++ P FT +L AC KL + G+ IH F N + I+++Y CG
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 271 ----------CPERALQVFNTV--------------------PKKGLSCWNSMVFGLAMN 300
P+R +N V P K + W SM+ G
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G NEAI LF L+ ++P+ ++ ++VL AC G ++ + T++ K ++
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKS-GFKRNVHV 179
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ ++D + G LE A ++ M + + W ++++ HG E A ++I+L
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEM-EERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLG 238
Query: 421 KNESCGYVLMSNLYAASY 438
+ G + L+A S+
Sbjct: 239 VKPN-GVTFIGLLHACSH 255
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 287/536 (53%), Gaps = 46/536 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +H HL TGL + + L S GD AY VF ++ NL+ WN ++ G+++
Sbjct: 70 KWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAK 129
Query: 65 SSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDG--------------- 107
+ A LF M P++ +++ ++ AYA+ G D
Sbjct: 130 LGKIKPARKLFDKM-------PEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYN 182
Query: 108 --------------------AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFD 147
Q HG+V+ G + I ++++ YA C + +AR +FD
Sbjct: 183 EYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFD 242
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
E+ DV+AW +M+ G A+ G+++ +R LFD M +N V+W S+I+GY R+ +ALE
Sbjct: 243 EMIIR-DVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALE 301
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
LF +M NI+P +FT S L A A + ++ G+ IH +L+ NTIVV+++IDMY
Sbjct: 302 LFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYS 361
Query: 268 KCGCPERALQVFNTVPKK-GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCGC E VF+ + K + WN+++ LA +G EAI++F + +KPD I+ I
Sbjct: 362 KCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLI 421
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+L AC+HSG V + + +T + + P+ +HY+C++D LGRAG + + MP
Sbjct: 422 VLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPC 481
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
P+ IW +LL CR HGNIE ++ A++IIELD S YVL+S+++AA ++E
Sbjct: 482 KPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENV 541
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMGS 502
R LM E + K+ S IE++ +VH F A RLHP +YL L L ++E+ S
Sbjct: 542 RQLMNERHVRKDRAISWIEIENKVHSFTASDRLHPLKEVIYLALKQLAGHMEEVLS 597
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 36/233 (15%)
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL-VTNCFELNTIVVTAIIDMYCKCG 270
+ I+ T+ LL CA +++ G+W+H L VT NT + +I+MY KCG
Sbjct: 41 LSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCG 100
Query: 271 CPERALQV-------------------------------FNTVPKKGLSCWNSMVFGLAM 299
A +V F+ +P+K + WN+MV A
Sbjct: 101 DYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAK 160
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIKPSI 358
+G+ N+A++ + L+ + + SF +L C ++ +K + ++ + I
Sbjct: 161 SGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVI 220
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
S ++DA + + +A +L M D + W +++S + G++E A++
Sbjct: 221 S--SSVLDAYAKCSEMGDARRLFDEMIIR-DVLAWTTMVSGYAQWGDVEAARE 270
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 281/488 (57%), Gaps = 16/488 (3%)
Query: 20 PIAASRILAFCTSPAGDINYAYLVFTQIKKPN----LFIWNTIIRGFSQSSTPRNAILLF 75
P++ L F SP N + + PN + +W + + + ++ A F
Sbjct: 25 PLSNPTKLNFPRSP----NSPHRNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEF 80
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARD--GAQLHGRVVKQGLEFDQFIHNT-IIYM 132
M + ++P +T+ +L A A + LHG K GL+ + T +I M
Sbjct: 81 TRMRLAG-VEPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDM 139
Query: 133 YANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
Y+ C L AR +F + + + V+WN+M+ G + GEI+ + +LFD+M +R+ +SW ++
Sbjct: 140 YSKCAQLGHARKVFYNLGVK-NSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTAL 198
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
I+G +++ ++ALE F +MQ + +++++L ACA LGA+ G W+H F++ F
Sbjct: 199 INGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEF 258
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
+ N + ++IDMY +CGC E A QVF + K+ L WNS++ G A+NG+ +E+++ F
Sbjct: 259 KDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFYA 318
Query: 313 LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAG 372
+Q KPD +S+ LTAC+H+G VN+ + F M +KI P I+HY C+VD GRAG
Sbjct: 319 MQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAG 378
Query: 373 LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSN 432
LE+A +I MP P+ ++ GSLL+ACR HG++ +A++ K + +LD YVL+SN
Sbjct: 379 RLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSN 438
Query: 433 LYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLND 492
+YAA +++ A R MK ++K+PG S +E+DG+VHEFVAG H A +Y +L+
Sbjct: 439 IYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFVAGDNYHADADNIYSMLD- 497
Query: 493 LGLLIQEM 500
LL E+
Sbjct: 498 --LLCHEL 503
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 151/410 (36%), Gaps = 101/410 (24%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL + L S + +A VF + N WNT++ GF ++
Sbjct: 116 LHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNG 175
Query: 67 TPRNAILLFIDMLVTSPI-----------------------QPQR-------LTYPSLFK 96
AI LF +M I Q QR ++ ++
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLA 235
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A LG G +H V+ Q + + I N++I MY+ CG + AR +F ++ + +V
Sbjct: 236 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKM-AKRTLV 294
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G DES LE F MQ++
Sbjct: 295 SWNSIIVGFAVNGFADES-------------------------------LEFFYAMQKEG 323
Query: 217 IKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
KP + L AC+ G + +G E N + I+D+Y + G E A
Sbjct: 324 FKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDA 383
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
L + +P +KP+ + ++L AC
Sbjct: 384 LNMIEEMP----------------------------------MKPNEVVLGSLLAACRTH 409
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA-GLLEEAEKLIRSM 384
G VN A+ LM +K+ P Y ++ + A G + A + R+M
Sbjct: 410 GDVNLAE---RLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTM 456
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/501 (34%), Positives = 289/501 (57%), Gaps = 38/501 (7%)
Query: 1 MKDLKKIHAHLIK--TGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNT 57
M+ L++IHA ++ ++ S+IL+F SP G+ +YA +F+QI P +F +N+
Sbjct: 1 MQILRQIHARILTHVPPISSVSFLISKILSFAALSPFGNFDYARKIFSQIPNPGIFAYNS 60
Query: 58 IIRGFSQSSTP-RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IRG + P + I LF DM+ P T + KA + + +G Q+H ++++
Sbjct: 61 VIRGCLYTKIPSKEPIHLFKDMVGKGYPNPNTFTMAFVLKACSIIMALEEGKQIHAQILR 120
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G ++ ++++ Y+ KC EI +R+
Sbjct: 121 SGFSSSPYVQSSLVNFYS--------------------------------KCEEITIARK 148
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD++ RN V W++M+SGY R EAL +FREMQ I+P E ++V +L+ACA +GA
Sbjct: 149 VFDEITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGA 208
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G+W+H ++ ++ + TA+I+MY KCGC E+A ++F+ + K W+SM+ G
Sbjct: 209 LDIGKWVHAYIKKRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVG 268
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA++G +A+ +FS ++ + KP++++FI +L+AC H G V+ K Y++ M E I+P
Sbjct: 269 LAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAHGGLVSDGKRYWSSMLEL-GIEP 327
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
S++HY CMVD L R GL++EA +P+ PD +IW +LL A K+ ++ A+ A ++
Sbjct: 328 SMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVAGKL 386
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+EL+ ++ Y++++NLYA+ Q E+ R +MKE I+ PGC+ IEVDG VH FV G
Sbjct: 387 LELEPWKAENYIILANLYASVSQLEKVSHVRKMMKENGIKALPGCTSIEVDGFVHNFVTG 446
Query: 477 GRLHPKAPEVYLLLNDLGLLI 497
HP+A E+ L D+ L I
Sbjct: 447 DWSHPEAEEIKKTLRDVALKI 467
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 301/509 (59%), Gaps = 19/509 (3%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K+ ++IH H++K G D + +++ G + A+ VF + ++ + +I+G
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ-NGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++ NA LF ++ V + ++ ++ YA+ G ++ +L ++K +
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVV-----SWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 122 DQFIHNTIIYMYANCGFLSEAR---LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D+ T++ A G + R L D+ ++ N++I +KCGE++ + LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+++ ++ +SWN++I GY +KEAL LF+EM P++ TM+S+L ACA LGAI
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 239 QGEWIHNFL------VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
G WIH ++ VTN L T ++IDMY KCG E A QVFN++ K LS WN+
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRT----SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
M+FG AM+G + + LFS ++ ++PD I+F+ +L+AC+HSG ++ + F MT+ Y
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 500
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
K+ P ++HY CM+D LG +GL +EAE++I M +PD +IW SLL AC+ HGN+E+ +
Sbjct: 501 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A+ +I+++ YVL+SN+YA++ ++ E + R L+ + ++K PGCS IE+D VHE
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 620
Query: 473 FVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
F+ G + HP+ E+Y +L ++ +L+++ G
Sbjct: 621 FIIGDKFHPRNREIYGMLEEMEVLLEKAG 649
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 247/455 (54%), Gaps = 39/455 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGD-INYAYLVFTQIKKPNLFIWNTI 58
++ L+ IHA +IK GL A S+++ FC SP + + YA VF I++PNL IWNT+
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG + SS P +A+ L++ M ++ + P T+P + K+ A+ ++G Q+HG V+K G
Sbjct: 106 FRGHALSSDPVSALKLYVCM-ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ D ++H ++I MY G L +A +FD+ DVV++ ++I G A G I+ +++LF
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDK-SPHRDVVSYTALIKGYASRGYIENAQKLF 223
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D++ ++ VSWN+MISGY +KEALELF++M + N++P E TMV++++ACA+ G+I
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G +H ++ + F N +V A+ID+Y KCG E A +F +P K + WN+++ G
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYT 343
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK-IKPS 357
EA+ LF + S P+ ++ +++L AC H G ++ + + + K + +
Sbjct: 344 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNA 403
Query: 358 IKHYSCMVDALGRAGLLEEAEKL----------------------------------IRS 383
+ ++D + G +E A ++ +R
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK 463
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ PD I + LLSAC G +++ + + + +
Sbjct: 464 IGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 268/463 (57%), Gaps = 20/463 (4%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ G++ A VF + +L WN +I G+ + AI ++ ++ + ++P +T
Sbjct: 127 ASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVY-KVMESEGVKPDDVTM 185
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
L + A LG G + + V GL + N ++ M++ CG + EAR +FD ++
Sbjct: 186 IGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEK 245
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
V +LFD M ++ V WN+MI G V+ + ++AL LF+E
Sbjct: 246 RTIV-------------------SKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQE 286
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ N P E TM+ L+AC++LGA+ G WIH ++ + LN + T+++DMY KCG
Sbjct: 287 MQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGN 346
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
AL VF+ + + + +++ GLA++G + AI F+ + + + PD I+FI +L+A
Sbjct: 347 ISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 406
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H G + +DYF+ M + + P +KHYS MVD LGRAGLLEEA+KL+ SMP + DA
Sbjct: 407 CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAA 466
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+WG+LL CR HGN+++ ++AAK+++ELD ++S YVL+ +Y + +E+A R +M
Sbjct: 467 VWGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMN 526
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLG 494
E +EK PGCS IEV+G V EF+ + P++ ++Y L+ LG
Sbjct: 527 ERGVEKIPGCSSIEVNGIVSEFIVRDKSRPESEKIYDCLHCLG 569
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 209/424 (49%), Gaps = 50/424 (11%)
Query: 11 LIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPR 69
++ TGL DP A+SR++AFC S + +NY + I+ PN F WN IRGFS+S P+
Sbjct: 1 MVITGLVLDPFASSRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPK 60
Query: 70 NAILLFIDMLVTSPIQ--PQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
+A+L + ML + P TYP LFK A L L G + G V K LE +HN
Sbjct: 61 DAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHN 120
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
I+M+A+CG + AR +FDE D+V+WN +I G K GE
Sbjct: 121 ASIHMFASCGEMENARKVFDESPVR-DLVSWNCLINGYKKIGE----------------- 162
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
++A+E+++ M+ + +KP + TM+ L+++CA LG + +G+ + ++
Sbjct: 163 --------------GEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYV 208
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK-------------KGLSCWNSMV 294
N + + A++DM+ KCG A ++F+ + K K + WN+M+
Sbjct: 209 KANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMI 268
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G +A+ LF +Q+SN PD I+ I L+AC+ G ++ + E + +
Sbjct: 269 GGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGI-WIHRYIEKHSL 327
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
++ + +VD + G + EA + + + +++ + +++ HG+ A
Sbjct: 328 SLNVALGTSLVDMYAKCGNISEALCVFHGIQT-RNSLTYTAIIGGLALHGDASTAISYFN 386
Query: 415 QIIE 418
++I+
Sbjct: 387 EMID 390
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 175/495 (35%), Positives = 280/495 (56%), Gaps = 16/495 (3%)
Query: 6 KIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
++HA + K+ AKD S +L A C P A VF + + N+ WN++I +
Sbjct: 913 QVHALVSKSPHAKDVYIGSALLDMYAKCEWP----EEARRVFEAMPERNIVSWNSLITCY 968
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEF 121
Q+ A++LF+ M+ + P +T S+ A A L R+G Q+H RVVK
Sbjct: 969 EQNGPVGEALVLFVSMMKAGFV-PDEVTLASVMSACAGLAADREGRQVHARVVKSDRFRE 1027
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D + N ++ MYA CG AR +FD + + VV+ S+I G A+ +++++ +F +M
Sbjct: 1028 DMVLSNALVDMYAKCGRTRAARCVFDRMASR-SVVSETSLITGYARSANVEDAQMVFSQM 1086
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
V +N ++WN +I+ Y +N + +EAL LF ++ +++ P+ +T ++LNAC + ++ G+
Sbjct: 1087 VEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQ 1146
Query: 242 WIHNFLVTNCF------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
H ++ F E + V +++DMY K G + +VF + + WN+M+
Sbjct: 1147 QAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIV 1206
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
G A NG +A+ LF + S PD ++ I VL+AC HSG V + + YF MTE + I
Sbjct: 1207 GHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGII 1266
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
PS HY+CM+D LGRAG L+E E+LI+ M +PDA++W SLL +CR H N+EM + AA +
Sbjct: 1267 PSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGK 1326
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+ ELD S YVL+SN+YA ++ + R MK + K+PGCS IE+ +V F+A
Sbjct: 1327 LFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKVSVFLA 1386
Query: 476 GGRLHPKAPEVYLLL 490
HP E++ +L
Sbjct: 1387 RDNGHPCKNEIHAIL 1401
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 204/400 (51%), Gaps = 36/400 (9%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFID 77
KD + ++ I++ S G I A VF +K+ NL WN ++ G+ +S A+LLF
Sbjct: 316 KDMVMSTSIVSGLAS-CGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQ 374
Query: 78 MLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCG 137
M + + +T S+ A + G ++H +K G + N ++ MY+ CG
Sbjct: 375 MRQETR-EFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCG 433
Query: 138 FLSEA-RLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY 196
L A RL+ E+ +E R++ SWNS+ISGY
Sbjct: 434 CLRSAERLLLFEMGSE-------------------------------RDSYSWNSLISGY 462
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
R+ + AL +MQ + + P++ T S L ACA + ++QG IH +++ +E++
Sbjct: 463 ERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDD 521
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
I+ + +IDMYCKC + ++++F P + + WNSM+FG A +G + LF +Q
Sbjct: 522 ILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQ 581
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE 376
+K D ++F+ L +C G V + YFTLM + I P I+HY CM++ LG+ G + E
Sbjct: 582 GIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIPRIEHYECMIELLGKHGCMVE 640
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
E + MP +P +W + CR++GN ++ ++AAK I
Sbjct: 641 LEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCI 680
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 197/388 (50%), Gaps = 13/388 (3%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A F I +PN WN I+R + + A+ +F ML ++ ++P T A
Sbjct: 205 ARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRML-SAGVRPLGYTVSHAVLACR 263
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
+G +H V++ G E + ++++ MYA CG + A+ +F+ + D+V
Sbjct: 264 DNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMK-DMVMST 322
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
S++ GLA CG I +++R+F+ M RN VSWN+M++GY+R++ AL LF++M+++ +
Sbjct: 323 SIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREF 382
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA--LQ 277
T+ S+L+AC + I +GE +H F + F + I+ A++ MY KCGC A L
Sbjct: 383 DAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLL 442
Query: 278 VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK 337
+F ++ WNS++ G + A+ + +Q S + P+ +F + L AC +
Sbjct: 443 LFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQ-SEVTPNQSTFSSALAACANIFL 501
Query: 338 VNQAKDYFTLMT-ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
+ Q M + Y+I ++ S ++D + + + ++ + PS D I+W S+
Sbjct: 502 LKQGMQIHAYMIRKGYEIDDILR--SVLIDMYCKCRQFDYSIRIFEARPSR-DVILWNSM 558
Query: 397 LSACRKHG----NIEMAKQAAKQIIELD 420
+ C G +++ + KQ I+ D
Sbjct: 559 IFGCAYSGKGEYGLDLFDEMQKQGIKAD 586
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 164/337 (48%), Gaps = 10/337 (2%)
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ F+ NT++ YA G L +AR +FDE+ + ++N+++ A+ G ++R LF +
Sbjct: 794 ETFLLNTLVSAYARLGRLPDARRVFDEIPHP-NTFSYNALLSAHARLGRPADARALFHAI 852
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+ S+N++I+ ++ + +AL M + + ++ S L+ACA R G
Sbjct: 853 PDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGV 912
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H + + + + +A++DMY KC PE A +VF +P++ + WNS++ NG
Sbjct: 913 QVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNG 972
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
EA+ LF + + PD ++ +V++AC + + + ++ + + +
Sbjct: 973 PVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLS 1032
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+ +VD + G A + M S + SL++ + N+E A+ Q++E K
Sbjct: 1033 NALVDMYAKCGRTRAARCVFDRMASR-SVVSETSLITGYARSANVEDAQMVFSQMVE--K 1089
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
N V+ N+ A+Y + EE L V++++E
Sbjct: 1090 N-----VIAWNVLIAAYA-QNGEEEEALRLFVRLKRE 1120
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 124/537 (23%), Positives = 219/537 (40%), Gaps = 120/537 (22%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A +F I P+ +N +I +Q S +A LLF+ + ++ S A A
Sbjct: 845 ARALFHAIPDPDQCSYNAVIAALAQHSRGADA-LLFLAAMHADDFVLNAYSFASALSACA 903
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
+R G Q+H V K D +I + ++ MYA C + EAR +F E E ++V+WN
Sbjct: 904 AEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVF-EAMPERNIVSWN 962
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
S +I+ Y +N EAL LF M + P
Sbjct: 963 S-------------------------------LITCYEQNGPVGEALVLFVSMMKAGFVP 991
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLV-TNCFELNTIVVTAIIDMYCKCG------C- 271
E T+ S+++ACA L A R+G +H +V ++ F + ++ A++DMY KCG C
Sbjct: 992 DEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCV 1051
Query: 272 ------------------------PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
E A VF+ + +K + WN ++ A NG E EA+
Sbjct: 1052 FDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEAL 1111
Query: 308 KLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKI----KPSIKHYS 362
+LF L+ ++ P + ++ VL AC + + + + ++ E ++ + + +
Sbjct: 1112 RLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGN 1171
Query: 363 CMVDALGRAGLLEEAEKLIRSMPS----------------------------------DP 388
+VD + G +++ K+ M + P
Sbjct: 1172 SLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESP 1231
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN---ESCGYVLMSNLYAASYQFEEAME 445
D++ +LSAC G +E ++ + + E D Y M +L + +E E
Sbjct: 1232 DSVTMIGVLSACGHSGLVEEGRRYFRSMTE-DHGIIPSQDHYTCMIDLLGRAGHLKEVEE 1290
Query: 446 ERLLMKEVKIEKEP-------GCSLIEVDGEVHEFVAGG--RLHPKAPEVYLLLNDL 493
L+KE+ +E + G + + E+ E+ AG L P+ Y+LL+++
Sbjct: 1291 ---LIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNM 1344
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 173/404 (42%), Gaps = 69/404 (17%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
WN II S++ P A+ LF +M + I+P+ T S+ A+ QLHG +
Sbjct: 119 WNAIITASSRAGHPSEALSLFSNM-NSLGIRPKDATMASVLSCCAECLDLCGARQLHGHI 177
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
K+ + + + ++ +Y NC L++AR FD++
Sbjct: 178 AKRDFQSNVILGTALVDVYGNCFLLADARRAFDDI------------------------- 212
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
+ N +SWN ++ Y A+++F M ++P +T+ + AC
Sbjct: 213 -------LEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDN 265
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
A+ +G IH F++ + +E + V ++++DMY KCG + A +FN P K + S+V
Sbjct: 266 NALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIV 325
Query: 295 FGLAMNGYENEAIKLFSGLQSSNL-------------------------------KPDYI 323
GLA G +A ++F G++ NL + D I
Sbjct: 326 SGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAI 385
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTET-YKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
+ +VL+AC + + ++ + + P +K+ +V + G L AE+L+
Sbjct: 386 TLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKN--ALVRMYSKCGCLRSAERLLL 443
Query: 383 -SMPSDPDAIIWGSLLSACRKHGNIEMAKQA-AKQIIELDKNES 424
M S+ D+ W SL+S +H E A A K E+ N+S
Sbjct: 444 FEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSEVTPNQS 487
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 14/297 (4%)
Query: 158 WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI 217
+N I LA CG + ++R LFD M R+ SWN++I+ R EAL LF M I
Sbjct: 88 FNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGI 147
Query: 218 KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQ 277
+P + TM S+L+ CA+ + +H + F+ N I+ TA++D+Y C A +
Sbjct: 148 RPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARR 207
Query: 278 VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK 337
F+ + + WN +V + G + A+ +F + S+ ++P + + AC +
Sbjct: 208 AFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNA 267
Query: 338 VNQAKDYFTLMTETYKIKPSIKHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
+ + + + ++ +H+ S +VD + G ++ A+ L P D ++
Sbjct: 268 LEEGR-----CIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMK-DMVMS 321
Query: 394 GSLLSACRKHGNIEMAKQAAKQIIELD----KNESCGYVLMSNLYAASYQFEEAMEE 446
S++S G I AK+ + + E + GY+ +L A F++ +E
Sbjct: 322 TSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQE 378
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 71/154 (46%), Gaps = 2/154 (1%)
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
T + I+ CG A ++F+ +P + WN+++ + G+ +EA+ LFS + S
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLE 375
++P + +VL+ C + A+ + + + ++ + +VD G LL
Sbjct: 145 LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKR-DFQSNVILGTALVDVYGNCFLLA 203
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+A + + +P+AI W ++ G +MA
Sbjct: 204 DARRAFDDIL-EPNAISWNVIVRRYHLAGMGDMA 236
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 283/489 (57%), Gaps = 34/489 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH+ + K G D I L S G I A LVF ++ + ++ W +I G ++
Sbjct: 348 KEIHSRVAKAGFTSD-IGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAK 406
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S A+ ++ +M + ++P R+TY S+ A + G ++H +VV+ GL D
Sbjct: 407 SGFGAEALTVYQEMQ-QAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAH 465
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ NT++ MY+ CG + ++R++FD+M+ R
Sbjct: 466 VGNTLVNMYS--------------------------------MCGSVKDARQVFDRMIQR 493
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V++N+MI GY + KEAL+LF +QE+ +KP + T +++LNACA G++ IH
Sbjct: 494 DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIH 553
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ F +T V A++ Y KCG A VF + K+ + WN+++ G A +G
Sbjct: 554 TLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQ 613
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A++LF ++ +KPD ++F+++L+AC+H+G + + + YF M++ + I P+I+HY CM
Sbjct: 614 DALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCM 673
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L+EAE LI++MP + IWG+LL ACR HGN+ +A++AA+ ++LD + +
Sbjct: 674 VDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNA 733
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YV +S++YAA+ ++ A + R LM++ + KEPG S I+V ++H FVA R HP++
Sbjct: 734 VVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSE 793
Query: 485 EVYLLLNDL 493
++Y L+ L
Sbjct: 794 KIYAELDRL 802
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 203/445 (45%), Gaps = 77/445 (17%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IH ++ GL D A+ IL + G I A VF +++K ++ W I G++
Sbjct: 146 REIHFQAMQAGLLFDVKVANCILNM-YAKCGSIEEAREVFDKMEKKSVVSWTITIGGYAD 204
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A +F M + P R+TY S+ A++ + G +H R++ G E D
Sbjct: 205 CGRSETAFEIFQKM-EQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTA 263
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA KCG + R++F+K+V+R
Sbjct: 264 VGTALVKMYA--------------------------------KCGSYKDCRQVFEKLVNR 291
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ ++WN+MI G ++EA E++ +MQ + + P++ T V LLNAC A+ G+ IH
Sbjct: 292 DLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIH 351
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + F + V A+I MY +CG + A VF+ + +K + W +M+ GLA +G+
Sbjct: 352 SRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGA 411
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHS----------------------------- 335
EA+ ++ +Q + ++P+ +++ ++L AC+
Sbjct: 412 EALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLV 471
Query: 336 ------GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD-- 387
G V A+ F M I+ I Y+ M+ L +EA KL + +
Sbjct: 472 NMYSMCGSVKDARQVFDRM-----IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGL 526
Query: 388 -PDAIIWGSLLSACRKHGNIEMAKQ 411
PD + + ++L+AC G++E A++
Sbjct: 527 KPDKVTYINMLNACANSGSLEWARE 551
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 230/495 (46%), Gaps = 77/495 (15%)
Query: 1 MKDL---KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIK--KPNLFIW 55
+KDL +++H H+I+ D + ++ G I A V+ ++ + + W
Sbjct: 36 VKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQ-CGSIEEARQVWKKLSYMERTVHSW 94
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N ++ G+ Q A+ L M + P R T S + G G ++H + +
Sbjct: 95 NAMVVGYIQYGYIEKALKLLRQMQ-QHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAM 153
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
+ GL FD + N I+ MYA KCG I+E+R
Sbjct: 154 QAGLLFDVKVANCILNMYA--------------------------------KCGSIEEAR 181
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+FDKM ++ VSW I GY + + A E+F++M+++ + P+ T +S+LNA +
Sbjct: 182 EVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPA 241
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A++ G+ +H+ ++ E +T V TA++ MY KCG + QVF + + L WN+M+
Sbjct: 242 ALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIG 301
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET---- 351
GLA GY EA ++++ +Q + P+ I+++ +L AC +S ++ K+ + + +
Sbjct: 302 GLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTS 361
Query: 352 -----------YKIKPSIKH---------------YSCMVDALGRAGLLEEAEKLIRSMP 385
Y SIK ++ M+ L ++G EA + + M
Sbjct: 362 DIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQ 421
Query: 386 S---DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE--LDKNESCGYVLMSNLYAASYQF 440
+P+ + + S+L+AC +E ++ +Q++E L + G L+ N+Y+
Sbjct: 422 QAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLV-NMYSMCGSV 480
Query: 441 EEAME--ERLLMKEV 453
++A + +R++ +++
Sbjct: 481 KDARQVFDRMIQRDI 495
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 92/183 (50%), Gaps = 5/183 (2%)
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
A+++ + +Q+Q + + + +L C ++ + G +H ++ + + V A+I+
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 265 MYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
MY +CG E A QV+ + ++ + WN+MV G GY +A+KL +Q L PD
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 323 ISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
+ ++ L++C G + ++ +F M +K +C+++ + G +EEA ++
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLF--DVKVANCILNMYAKCGSIEEAREVF 184
Query: 382 RSM 384
M
Sbjct: 185 DKM 187
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 304/540 (56%), Gaps = 46/540 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H H+++ G + + ++ G ++ A VF ++ + WNT++ G++
Sbjct: 155 RSVHGHVVEMGFQWNLHVGNELMGM-YGKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 213
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG--------LAR----------- 105
+ A +F M+ ++ ++P +T+ SL ++A+ G R
Sbjct: 214 NYDCHGASEMF-RMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAE 272
Query: 106 ----------------DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
+G +HG VVK G E F+ N++I +Y G ++ AR++F E+
Sbjct: 273 ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEI 332
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDK--------MVSRNTVSWNSMISGYVRNVK 201
T+ ++V+WN++I A G DE+ +F + MV N VSW+++I G+ +
Sbjct: 333 KTK-NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQ 391
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTA 261
+EALELFR MQ +K + T+ S+L+ CA+L A+ G IH +V + + N +V
Sbjct: 392 GEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNG 451
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
+I+MY K G + VF + K L WN+MV G ++G AI+ F + +PD
Sbjct: 452 LINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPD 511
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
++F+AVL+AC+H+G V + ++ F M + ++++P ++HY+CMVD LGRAGLL+EA K++
Sbjct: 512 GVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVV 571
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
+SMP +P+A +WG+LL++CR H N E+A++ A QI L+ + Y+L+SN+YAAS ++E
Sbjct: 572 KSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWE 631
Query: 442 EAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ + R+ K ++K PG S I+V +V+ F AG H + EVY +L DLGL ++ G
Sbjct: 632 DSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEG 691
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 205/451 (45%), Gaps = 48/451 (10%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVF--TQIK-KPNLFIWNTIIRG 61
++IH+ +I TG + A+R+++ + G ++ A VF + I+ NL +WN+I+R
Sbjct: 51 QQIHSQIIVTGSHRSAFLAARVVS-VYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRA 109
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
A+ ++ M + T+P + +A A +G + +HG VV+ G ++
Sbjct: 110 NVAHGYCEEALEIYCRMRKLG-VSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQW 168
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ + N ++ MY G + +AR +F+ + V+WN+M+ G A + + +F M
Sbjct: 169 NLHVGNELMGMYGKIGRMDDARKVFERMAVR-SCVSWNTMVSGYALNYDCHGASEMFRMM 227
Query: 182 VSR----NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
S N V+W S++S + R + E +ELF M+ + I + + +L+ L A
Sbjct: 228 GSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAF 287
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
+G+ IH ++V FE V ++I +Y K G A +F + K + WN+++
Sbjct: 288 DEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSY 347
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A G+ +EA +F L+ ++ P ++P+
Sbjct: 348 ADLGWCDEAFAIFLQLEKTDEYP--------------------------------MVRPN 375
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSM---PSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+ +S ++ G EEA +L R M +++ S+LS C + + + ++
Sbjct: 376 VVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHG 435
Query: 415 QIIE--LDKNESCGYVLMSNLYAASYQFEEA 443
++ +D N G L+ N+Y S F+E
Sbjct: 436 HVVRSLMDGNILVGNGLI-NMYTKSGSFKEG 465
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/554 (31%), Positives = 298/554 (53%), Gaps = 74/554 (13%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L++IHA L+ GL ++++ +S GDI +A VF + +P +F WN IIRG+S
Sbjct: 37 LRQIHARLLVLGLQFSGFLITKLI-HASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYS 95
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+++ ++A+L++ M + + + P T+P L KA L + G +H +V + G E D
Sbjct: 96 RNNHFQDALLMYSKMQL-ARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADV 154
Query: 124 FIH---------------------------------NTIIYMYANCGFLSEARLMFDEV- 149
F+ I+ YA G EA +F ++
Sbjct: 155 FVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMR 214
Query: 150 --DTEFDVVAWNS---------------------MIIGL--------------AKCGEID 172
D + D VA S M +GL AKCG++
Sbjct: 215 KMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVA 274
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
++ LFDKM S N + WN+MISGY +N K+A++LF EM ++++P ++ S ++ACA
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACA 334
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
++G++ Q W+ ++ + + + + +A+IDM+ KCG E A VF+ + + W++
Sbjct: 335 QVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSA 394
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
M+ G ++G EAI L+ ++ + P+ ++F+ +L ACNHSG V + +F M + +
Sbjct: 395 MIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-H 453
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
KI P +HY+C++D LGRAG L++A ++I+ MP P +WG+LLSAC+KH ++E+ K A
Sbjct: 454 KINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYA 513
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A+Q+ +D + + YV +SNLYAA+ ++ E R+ MKE + K+ GCS +EV G +
Sbjct: 514 AQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEG 573
Query: 473 FVAGGRLHPKAPEV 486
F G + HP+ E+
Sbjct: 574 FRVGDKSHPRYEEI 587
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 278/502 (55%), Gaps = 6/502 (1%)
Query: 3 DLK---KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
DLK +HA +++ + D + + ++ + G ++ A VF +++ + WN++I
Sbjct: 293 DLKWGAHLHARILRMEHSLDLVFGNGLIDM-YAKCGCLDLAKRVFKSLREHDHISWNSLI 351
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G +A++LF M +S + + P++ + A G LHG +K G+
Sbjct: 352 TGVVHFGLGEDALILFNQMRRSSVVLDE-FILPTILGVCSGPDYASTGELLHGYTIKSGM 410
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ N II MYA CG +A L+F + + ++W +MI ++ G+I ++R FD
Sbjct: 411 GSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITAFSRSGDIGKARGYFD 469
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M RN V+WNSM+S YV+N +E L+L+ M+ ++P T + + ACA L ++
Sbjct: 470 MMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKL 529
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G + LN V +I+ MY +CG + A F+++ K L WN+M+ A
Sbjct: 530 GMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQ 589
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG + I F + + KP++IS+++VL+ C+H G V + K YF MT + I P+ +
Sbjct: 590 NGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNE 649
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
H+SCMVD LGRAGLLE+A+ LI MP P+A +W +LL +CR H ++ +A+ AAK+++EL
Sbjct: 650 HFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMEL 709
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D S GYVL+SN+Y+ S + + + R LMK I GCS IEVD VH F
Sbjct: 710 DVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETS 769
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+ EVYL L ++ +I++ G
Sbjct: 770 HPQIKEVYLKLEEMMKMIEDTG 791
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 210/448 (46%), Gaps = 52/448 (11%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+HA LI +GL + +L S G + A+ VF + N+F WNT+IR
Sbjct: 28 RKLHAQLILSGLDSSLFLLNNLLHM-YSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVS 86
Query: 65 SSTPRNAILLFIDMLV--------TSPIQPQR---------------------------- 88
SS +A LF +M V T+ I
Sbjct: 87 SSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP 146
Query: 89 LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE 148
++ S+ KA LG +R QLH V K G + I N+++ MY CG + A +F +
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206
Query: 149 VDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
++ + WNSMI G ++ ++ ++F++M R+ VSWN++IS + ++ + L +
Sbjct: 207 IERP-SLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAM 265
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
F EM Q P+ T S+L+ACA ++ G +H ++ L+ + +IDMY K
Sbjct: 266 FVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAK 325
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CGC + A +VF ++ + WNS++ G+ G +A+ LF+ ++ S++ D +
Sbjct: 326 CGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTI 385
Query: 329 LTACNHSGKVNQAKDYFTL--MTETYKIKPSIKHYSCMVDAL----GRAGLLEEAEKLIR 382
L C+ DY + + Y IK + + + +A+ + G ++A+ + R
Sbjct: 386 LGVCS-------GPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFR 438
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAK 410
MP + I W ++++A + G+I A+
Sbjct: 439 LMPL-RNTISWTAMITAFSRSGDIGKAR 465
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 194/460 (42%), Gaps = 96/460 (20%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++HA + K G + + ++ GD++ A VF I++P+LF WN++I G+SQ
Sbjct: 167 QLHALVSKLGFGMETCIQNSVVGMYV-KCGDVDLAETVFFDIERPSLFCWNSMIYGYSQM 225
Query: 66 STPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLF 95
P A+ +F M + P +TY S+
Sbjct: 226 YGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVL 285
Query: 96 KAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDV 155
A A + GA LH R+++ D N +I MYA CG L A+ +F + E D
Sbjct: 286 SACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSL-REHDH 344
Query: 156 VAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ 215
++WNS+I G+ G ++AL LF +M+
Sbjct: 345 ISWNSLITGVVHFG-------------------------------LGEDALILFNQMRRS 373
Query: 216 NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
++ EF + ++L C+ GE +H + + + + V AII MY KCG ++A
Sbjct: 374 SVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKA 433
Query: 276 LQVF------NTV-------------------------PKKGLSCWNSMVFGLAMNGYEN 304
VF NT+ P++ + WNSM+ NG+
Sbjct: 434 DLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSE 493
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
E +KL+ ++S+ ++PD+I+F + AC V T T+ + + ++ + +
Sbjct: 494 EGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLSLNVSVANSI 552
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
V R GL++EA+ S+ D D I W ++L+A ++G
Sbjct: 553 VTMYSRCGLIKEAKNTFDSI-DDKDLISWNAMLAAFAQNG 591
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 291/538 (54%), Gaps = 40/538 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ L+ +H+ +I L + +++ S D+ A VF +I + N+ I N +IR
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYAS-LKDVASARKVFDEIPERNVIIINVMIR 113
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ + + +F M + ++P T+P + KA + G G ++HG K GL
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES------ 174
F+ N ++ MY CGFLSEARL+ DE+ + DVV+WNS+++G A+ D++
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEM-SRRDVVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 175 -------------------------------RRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+ +F KM ++ VSWN MI Y++N
Sbjct: 232 MESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 291
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
EA+EL+ M+ +P ++ S+L AC A+ G+ IH ++ N ++ A+I
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY KCGC E+A VF + + + W +M+ +G +A+ LFS LQ S L PD I
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F+ L AC+H+G + + + F LMT+ YKI P ++H +CMVD LGRAG ++EA + I+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
M +P+ +WG+LL ACR H + ++ AA ++ +L +S YVL+SN+YA + ++EE
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R +MK ++K PG S +EV+ +H F+ G R HP++ E+Y L+ L ++E+G
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELG 589
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 293/554 (52%), Gaps = 77/554 (13%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRN 70
LI +GLA S +L S D+ Y L+F ++ P +F+WNTI+R FS SS P+
Sbjct: 31 LITSGLAHHTFFLSDLL---RSATKDLGYTLLLFDRLATPYIFLWNTIVRSFSASSQPQ- 86
Query: 71 AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTII 130
+L+ L + P R T+P L KA+++L + Q + +VK GL+FD F+ N+++
Sbjct: 87 MVLVAYSRLRNHGVIPDRHTFPLLLKAFSKL-RNENPFQFYAHIVKFGLDFDAFVQNSLV 145
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM--------- 181
+A+CG++ +R +F E + DVV+W ++I G + G E+ F +M
Sbjct: 146 SAFAHCGYVDCSRRLFIETAKK-DVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDE 204
Query: 182 --------------------------VSRNTVSWN-----SMISGYVRNVKFKEALELFR 210
V V W+ +++ Y + +A+++F
Sbjct: 205 VTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFN 264
Query: 211 EMQEQN-------------------------------IKPSEFTMVSLLNACAKLGAIRQ 239
EM +N I+P++ T+ S L ACA+LG++ Q
Sbjct: 265 EMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQ 324
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G W+H ++ + LN+ + TA++DMY KCGC + AL VF +P K + W +M+ GLAM
Sbjct: 325 GRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAM 384
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
G ++ LFS + S ++P+ ++F+ VL+AC H G V++ + F LM Y+++P++
Sbjct: 385 RGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVD 444
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAG LEEA K I SMP +P +WG+L S C H E+ + +I+L
Sbjct: 445 HYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKL 504
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ S Y+L++NLY+ ++E A R LMK ++K P CS IEV+G +HEF+A +
Sbjct: 505 QPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPACSWIEVNGVIHEFIAFDKS 564
Query: 480 HPKAPEVYLLLNDL 493
H ++ VY++L +
Sbjct: 565 HIESINVYMMLGSV 578
>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 585
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/380 (42%), Positives = 245/380 (64%), Gaps = 1/380 (0%)
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+ N ++ Y G ++EAR +FD + D+V+WN+MI G A G++ +R +FD
Sbjct: 115 DVFLCNVMLAAYVARGEVAEARKVFDGMSGR-DLVSWNTMIHGYAVRGDVGMAREIFDGT 173
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ SW+SMIS Y + KEALEL+REM+ + P +MVS+L+AC+ +GA+ G
Sbjct: 174 RDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGA 233
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H F+ +N E++ + TA++DMY KCG E +L+VF+ +P K + W+SM+ GLA +G
Sbjct: 234 EVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHG 293
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
++A+ LFS + S L+P+ I+FI VL AC H G VN K YF+ M++ + + P ++HY
Sbjct: 294 LGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHY 353
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD LGRAG +EEA +LIRSM PD IIW +LL ACR H N+E+A++A ++ LD
Sbjct: 354 GCMVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDP 413
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
YVL+SN+YA + +E E R ++ I++ PG S IE + VHEFV+G R HP
Sbjct: 414 LADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVPGRSSIEWENTVHEFVSGDRSHP 473
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
+ E+Y +L ++ +++ G
Sbjct: 474 RIEEIYKMLEEMMDRLRQAG 493
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 172/412 (41%), Gaps = 85/412 (20%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+ A +F + + F W+++I +++ + A+ L+ +M V + P ++ S+
Sbjct: 161 GDVGMAREIFDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAG-VAPDCISMVSV 219
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A + +G GA++H V +E D + ++ MYA CG + + +F + + D
Sbjct: 220 LSACSAMGALAIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVK-D 278
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V+ W+SMIIGLA G G+ +AL LF EM
Sbjct: 279 VLTWSSMIIGLANHG------------------------LGH-------DALSLFSEMIS 307
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
Q ++P+E T + +L AC +G + G+ + +
Sbjct: 308 QGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMS-------------------------- 341
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
V VP+ + + MV L G+ EA++L ++S KPD I + +L AC
Sbjct: 342 --DVHGVVPR--MEHYGCMVDLLGRAGHVEEAMEL---IRSMTFKPDPIIWRTLLGACRI 394
Query: 335 SGKVNQAKDYFTLMTETYKIKP-SIKHYSCMVDALGRAGLLE---EAEKLIR-----SMP 385
V A++ M + + P + HY + + +A E E K IR +P
Sbjct: 395 HKNVEIAEE---AMAKLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVP 451
Query: 386 SDPDAIIWGS----LLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNL 433
+I W + +S R H IE + +++ +D+ GY M++L
Sbjct: 452 G-RSSIEWENTVHEFVSGDRSHPRIEEIYKMLEEM--MDRLRQAGYRPMTSL 500
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 21/200 (10%)
Query: 255 NTIVVTAIIDMYCKCGCPERALQ--VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
+ V TA+++MY K E AL F+ P++ + N M+ G EA K+F G
Sbjct: 82 DLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAAYVARGEVAEARKVFDG 141
Query: 313 LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAG 372
+ +L +S+ ++ G V A++ F + +S M+ A +
Sbjct: 142 MSGRDL----VSWNTMIHGYAVRGDVGMAREIFDGTRDRDAFS-----WSSMISAYAKGR 192
Query: 373 LLEEAEKLIRSM---PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI----IELDKNESC 425
+EA +L R M PD I S+LSAC G + + + + + +E+D
Sbjct: 193 CSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHRFVESNRVEVDMKLGT 252
Query: 426 GYVLMSNLYAASYQFEEAME 445
V ++YA E +++
Sbjct: 253 ALV---DMYAKCGDIENSLK 269
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 166/471 (35%), Positives = 272/471 (57%), Gaps = 6/471 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD++ A F +I +WN +I G+ QS A LF M V+ I P T+ SL
Sbjct: 244 GDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRM-VSKRIPPDEFTFTSL 302
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEF----DQFIHNTIIYMYANCGFLSEARLMFDEVD 150
A A G G +HG+ ++ +F ++N ++ +Y+ G ++ A +FD +
Sbjct: 303 LSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSM- 361
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
T DVV+WN+++ G + G +D + R+F +M ++ +SW M+SGYV ++AL+LF
Sbjct: 362 TLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFN 421
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M+ +++KP ++T + AC +LGA++ G+ +H LV FE + A++ MY +CG
Sbjct: 422 QMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCG 481
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
+ A VF +P WN+M+ L +G+ EA++LF + + + PD ISF+ +LT
Sbjct: 482 AVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILT 541
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
ACNH+G V+ YF M + I P HY+ ++D LGRAG + EA LI++MP +P
Sbjct: 542 ACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTP 601
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
IW ++LS CR +G++E+ AA Q+ ++ Y+L+SN Y+A+ ++ +A R LM
Sbjct: 602 AIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLM 661
Query: 451 KEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ ++KEPGCS IEV +VH F+ G HP A EVY L +G ++++G
Sbjct: 662 RDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLG 712
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 216/476 (45%), Gaps = 52/476 (10%)
Query: 20 PIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM 78
P+AA+ ++ A+ + + A+ + + + + N +I F+++S A+ +F +
Sbjct: 89 PVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSL 148
Query: 79 LVTS-PIQPQRLTYPSLFKAYAQLG--LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
L + ++P ++ SL A Q+ QLH V K G + N +I +Y
Sbjct: 149 LASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMK 208
Query: 136 C---GFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
C G +AR + DE+ E D + W ++++G + G++ +R F+++ V WN+M
Sbjct: 209 CDAPGVTRDARKVLDEM-PEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAM 267
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH-------- 244
ISGYV++ EA ELFR M + I P EFT SLL+ACA G G+ +H
Sbjct: 268 ISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQP 327
Query: 245 NFLVTNCFELNTIVVT---------------------------AIIDMYCKCGCPERALQ 277
+F+ +N +VT I+ Y + GC + A +
Sbjct: 328 DFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAAR 387
Query: 278 VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK 337
+F +P K W MV G G +A+KLF+ ++S ++KP ++ + AC G
Sbjct: 388 IFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGA 447
Query: 338 VNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLL 397
+ K + + + S + ++ R G +++A + MP + D++ W +++
Sbjct: 448 LKHGKQLHAHLVQC-GFEASNSAGNALLTMYARCGAVKDARLVFLVMP-NVDSVSWNAMI 505
Query: 398 SACRKHGN----IEMAKQAAKQIIELDKNESCGYVLMSN---LYAASYQFEEAMEE 446
SA +HG+ +E+ Q Q I D+ + N L +Q+ E+ME
Sbjct: 506 SALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMER 561
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 8/223 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K K++HAHL++ G A + +L + G + A LVF + + WN +I
Sbjct: 448 LKHGKQLHAHLVQCGFEASNSAGNALLTM-YARCGAVKDARLVFLVMPNVDSVSWNAMIS 506
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GL 119
Q R A+ LF D +V I P R+++ ++ A GL DG Q + + G+
Sbjct: 507 ALGQHGHGREALELF-DQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGI 565
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID----ESR 175
+ + +I + G + EAR + + E W +++ G G+++ +
Sbjct: 566 SPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAAD 625
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
+LF KMV + ++ + + Y ++ +A + + M+++ +K
Sbjct: 626 QLF-KMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVK 667
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 304/540 (56%), Gaps = 46/540 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H H+++ G + + ++ G ++ A VF ++ + WNT++ G++
Sbjct: 155 RSVHGHVVEMGFQWNLHVGNELMGM-YGKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 213
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG--------LAR----------- 105
+ A +F M+ ++ ++P +T+ SL ++A+ G R
Sbjct: 214 NYDCHGASEMF-RMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAE 272
Query: 106 ----------------DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
+G +HG VVK G E F+ N++I +Y G ++ AR++F E+
Sbjct: 273 ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEI 332
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDK--------MVSRNTVSWNSMISGYVRNVK 201
T+ ++V+WN++I A G DE+ +F + MV N VSW+++I G+ +
Sbjct: 333 KTK-NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQ 391
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTA 261
+EALELFR MQ +K + T+ S+L+ CA+L A+ G IH +V + + N +V
Sbjct: 392 GEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNG 451
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
+I+MY K G + VF + K L WN+MV G ++G AI+ F + +PD
Sbjct: 452 LINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPD 511
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
++F+AVL+AC+H+G V + ++ F M + ++++P ++HY+CMVD LGRAGLL+EA K++
Sbjct: 512 GVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVV 571
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
+SMP +P+A +WG+LL++CR H N E+A++ A QI L+ + Y+L+SN+YAAS ++E
Sbjct: 572 KSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWE 631
Query: 442 EAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ + R+ K ++K PG S I+V +V+ F AG H + EVY +L DLGL ++ G
Sbjct: 632 DSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEG 691
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 208/452 (46%), Gaps = 50/452 (11%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVF--TQIK-KPNLFIWNTIIRG 61
++IH+ +I TG + A+R+++ + G ++ A VF + I+ NL +WN+I+R
Sbjct: 51 QQIHSQIIVTGSHRSAFLAARVVS-VYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRA 109
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
A+ ++ M + T+P + +A A +G + +HG VV+ G ++
Sbjct: 110 NVAHGYCEEALEIYCRMRKLG-VSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQW 168
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ + N ++ MY G + +AR +F+ + V+WN+M+ G A + + +F M
Sbjct: 169 NLHVGNELMGMYGKIGRMDDARKVFERMAVR-SCVSWNTMVSGYALNYDCHGASEMFRMM 227
Query: 182 VSR----NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
S N V+W S++S + R + E +ELF M+ + I + + +L+ L A
Sbjct: 228 GSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAF 287
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
+G+ IH ++V FE V ++I +Y K G A +F + K + WN+++
Sbjct: 288 DEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSY 347
Query: 298 AMNGYENEAIKLFSGLQSSN----LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
A G+ +EA +F L+ ++ ++P+ +S+ AV+ G+ +A + F M + K
Sbjct: 348 ADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRM-QLAK 406
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
+K +++ S+LS C + + + ++
Sbjct: 407 VK--------------------------------ANSVTIASVLSVCAELAALHLGREIH 434
Query: 414 KQIIE--LDKNESCGYVLMSNLYAASYQFEEA 443
++ +D N G L+ N+Y S F+E
Sbjct: 435 GHVVRSLMDGNILVGNGLI-NMYTKSGSFKEG 465
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 167/487 (34%), Positives = 279/487 (57%), Gaps = 3/487 (0%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H ++ GL + +L S AG + + F ++ N+ WN++I G++Q+
Sbjct: 134 VHGVALRLGLVGQVFVGNALLHSYAS-AGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAG 192
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
R LF +M ++ + T SL A +Q G G +H R++ G D +
Sbjct: 193 DTREVCSLFGEMRRQGFLEDE-FTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILE 251
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+ ++ MY CG L AR F+ + + VV+W SM+ K G ++ +R FD M RN
Sbjct: 252 SALVDMYGKCGDLWMARRCFEMMPIK-SVVSWTSMLCAQTKHGSVNAARCWFDHMPERNI 310
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSWN+MIS YV+ + EAL+L+ +MQ Q + P E T+V++L+A ++G + G+ +H +
Sbjct: 311 VSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLY 370
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ N + + +V +++DMY KCG + A+ +F+ + + + WN ++ GLAM+G +
Sbjct: 371 IRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDT 430
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
I F + + + PD I+F+A+L+AC+H G + + YF M Y +K ++HY+CMVD
Sbjct: 431 ITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVD 490
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR G LE+A LI+ MP PD ++WG+LL ACR HGN+++ +Q KQ++EL+
Sbjct: 491 LLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISGGL 550
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
+VL+SNL ++Q+E+ R LMKE K+ G S IE++ +HEF H ++ E+
Sbjct: 551 FVLISNLLYETHQWEDMKRLRKLMKEWGTRKDMGVSSIEINNSIHEFGVEDIRHERSSEI 610
Query: 487 YLLLNDL 493
Y +++ L
Sbjct: 611 YAVVDQL 617
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 140/530 (26%), Positives = 234/530 (44%), Gaps = 112/530 (21%)
Query: 1 MKDLKKIHAHLIKTG---LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
++ L ++HAHL+ G A D + AS A + G + +A +F I P+ ++NT
Sbjct: 24 IQRLNQLHAHLLVHGSLSAASDLLLAS-YCALAKAGHGVLCHARRLFDGIPGPDRVMYNT 82
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA-QLHGRVVK 116
IIR + SS PR A+ L ML I P T P + KA + AR+ A +HG ++
Sbjct: 83 IIRAYCNSSCPREALRLHRGML-RRGILPNEFTLPFVVKA-CTIAQAREHALAVHGVALR 140
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
GL F+ N +++ YA+ G L ++R FDE+ + +VV+WNSMI G A+ G+
Sbjct: 141 LGLVGQVFVGNALLHSYASAGSLGDSRRFFDEM-VDRNVVSWNSMIGGYAQAGDT----- 194
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+E LF EM+ Q EFT+VSLL AC++ G
Sbjct: 195 --------------------------REVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGN 228
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG---CPERALQV--------------- 278
+ G +H ++ + ++ I+ +A++DMY KCG R ++
Sbjct: 229 LEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCA 288
Query: 279 -------------FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
F+ +P++ + WN+M+ G +EA+ L++ +QS L PD I+
Sbjct: 289 QTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITL 348
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL----- 380
+AVL+A G + K L P + + ++D + G ++ A L
Sbjct: 349 VAVLSASGRIGDLTVGK-MVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMC 407
Query: 381 --------------------------IRSMPSD---PDAIIWGSLLSACRKHGNIEMAK- 410
RSM +D PD I + +LLSAC G +E +
Sbjct: 408 NRNVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQH 467
Query: 411 --QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
++ + + + K+E Y M +L E+A+ L+KE+ ++ +
Sbjct: 468 YFESMRHVYNV-KHEVEHYACMVDLLGRRGHLEKAV---CLIKEMPMKPD 513
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 140/324 (43%), Gaps = 17/324 (5%)
Query: 165 LAKCGE--IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
LAK G + +RRLFD + + V +N++I Y + +EAL L R M + I P+EF
Sbjct: 54 LAKAGHGVLCHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEF 113
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T+ ++ AC A +H + V A++ Y G + + F+ +
Sbjct: 114 TLPFVVKACTIAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEM 173
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
+ + WNSM+ G A G E LF ++ D + +++L AC+ G + +
Sbjct: 174 VDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGR 233
Query: 343 -DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
+ ++ ++ ++ S +VD G+ G L A + MP + W S+L A
Sbjct: 234 LVHCRMLVSGSRVDLILE--SALVDMYGKCGDLWMARRCFEMMPI-KSVVSWTSMLCAQT 290
Query: 402 KHGNIEMAK-----QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
KHG++ A+ + I+ + SC YV + A + + + L E+ +
Sbjct: 291 KHGSVNAARCWFDHMPERNIVSWNAMISC-YVQRGQCHEALDLYNQMQSQGLAPDEITL- 348
Query: 457 KEPGCSLIEVDGEVHEFVAGGRLH 480
+++ G + + G +H
Sbjct: 349 ----VAVLSASGRIGDLTVGKMVH 368
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/507 (35%), Positives = 288/507 (56%), Gaps = 13/507 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIK----KPNLFIWN 56
+KD + + L + G+ SR + G + +F Q + + NL WN
Sbjct: 125 LKDARNVFDKLPQPGVVTSSALISRF-----ARKGRVKETKELFYQTRDLGVELNLVSWN 179
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+I GF++S + +A+L+F +M + ++P + S+ A L + G Q+H V+K
Sbjct: 180 GMISGFNRSGSYLDAVLMFQNMHLEG-LKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIK 238
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
QGL D+F+ + +I MY C SE +F+E+D E DV A N+++ GL++ G +D +
Sbjct: 239 QGLGPDKFVVSALIDMYGKCACASEMSGVFNEMD-EVDVGACNALVTGLSRNGLVDNALE 297
Query: 177 LFD--KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
+F K + N VSW SMI+ +N K EALELFREMQ + +KP+ T+ LL AC +
Sbjct: 298 VFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNI 357
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
A+ G+ H F + N + V +A+IDMY KCG + F+ +P + L WNS++
Sbjct: 358 AALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLM 417
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G AM+G EAI +F +Q KPD++SF VL+AC G + YF M+ + +
Sbjct: 418 AGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGV 477
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+ ++HYSCMV LGR+G LEEA +I+ MP +PD+ +WG+LLS+CR H +++ + AAK
Sbjct: 478 EARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAK 537
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
++ EL+ Y+L+SN+YA+ + E R +M+ ++K PG S IE+ +VH +
Sbjct: 538 RVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLL 597
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEMG 501
AG HP+ P++ L L + +++ G
Sbjct: 598 AGDSSHPQMPQIIEKLAKLTVEMKKSG 624
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 176/340 (51%), Gaps = 15/340 (4%)
Query: 39 YAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY 98
+A+++ T I P I+ FS+ + + I +F ML T I P P++ K
Sbjct: 32 HAHILKTGISLPE------TIQIFSKLNHFGHVIRVFSYML-TQGIVPDSRVLPTVIKTC 84
Query: 99 AQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAW 158
A L + G Q+H + GL D + +++++MY L +AR +FD++ + VV
Sbjct: 85 AALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKL-PQPGVVTS 143
Query: 159 NSMIIGLAKCGEIDESRRLF----DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+++I A+ G + E++ LF D V N VSWN MISG+ R+ + +A+ +F+ M
Sbjct: 144 SALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHL 203
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+ +KP ++ S+L A L G IH +++ + VV+A+IDMY KC C
Sbjct: 204 EGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASE 263
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
VFN + + + N++V GL+ NG + A+++F + +L + +S+ +++ +C+
Sbjct: 264 MSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDL--NVVSWTSMIASCSQ 321
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
+GK +A + F M + +KP+ C++ A G L
Sbjct: 322 NGKDMEALELFREM-QIEGVKPNSVTIPCLLPACGNIAAL 360
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 291/538 (54%), Gaps = 40/538 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ L+ +H+ +I L + +++ S D+ A VF +I + N+ I N +IR
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYAS-LKDVASARKVFDEIPERNVIIINVMIR 113
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ + + +F M + ++P T+P + KA + G G ++HG K GL
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES------ 174
F+ N ++ MY CGFLSEARL+ DE+ + DVV+WNS+++G A+ D++
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEM-SRRDVVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 175 -------------------------------RRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+ +F KM ++ VSWN MI Y++N
Sbjct: 232 MESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 291
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
EA+EL+ M+ +P ++ S+L AC A+ G+ IH ++ N ++ A+I
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY KCGC E+A VF + + + W +M+ +G +A+ LFS LQ S L PD I
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F+ L AC+H+G + + + F LMT+ YKI P ++H +CMVD LGRAG ++EA + I+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
M +P+ +WG+LL ACR H + ++ AA ++ +L +S YVL+SN+YA + ++EE
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R +MK ++K PG S +EV+ +H F+ G R HP++ E+Y L+ L ++E+G
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELG 589
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 163/489 (33%), Positives = 287/489 (58%), Gaps = 34/489 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IH+ ++K G D I+ L + G I A L+F ++ + ++ W +I G ++
Sbjct: 466 REIHSRVVKDGFMFD-ISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAK 524
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S A+ +F DM + ++P R+TY S+ A + G ++H +V++ GL D
Sbjct: 525 SGLGAEALAVFQDMQ-QAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAH 583
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ NT++ MY+ CG + ++R++FD+M R
Sbjct: 584 VANTLVNMYS--------------------------------MCGSVKDARQVFDRMTQR 611
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V++N+MI GY + KEAL+LF +QE+ +KP + T +++LNACA G++ + IH
Sbjct: 612 DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIH 671
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ ++ + + +T + A++ Y KCG AL VF+ + K+ + WN+++ G A +G
Sbjct: 672 SLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQ 731
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+ ++LF ++ +KPD ++F+++L+AC+H+G + + + YF M+ + I P+I+HY CM
Sbjct: 732 DVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCM 791
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L+E E LI++MP + IWG+LL ACR HGN+ +A++AA+ ++LD + +
Sbjct: 792 VDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNA 851
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YV +S++YAA+ ++ A + R LM++ + KEPG S IEV ++H FVA R HP++
Sbjct: 852 AVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESE 911
Query: 485 EVYLLLNDL 493
++Y L+ L
Sbjct: 912 KIYAELDKL 920
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 217/480 (45%), Gaps = 80/480 (16%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IH +K L D A+ IL + G I+ A VF +++ ++ W II G++
Sbjct: 264 REIHVEAMKARLLFDVNVANCILNM-YAKCGSIHEAREVFDKMETKSVVSWTIIIGGYAD 322
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A +F M + P R+TY ++ A++ + G +H ++ G E D
Sbjct: 323 CGHSEIAFEIFQKMQ-QEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLA 381
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA KCG + R++F+K+V+R
Sbjct: 382 VGTALVKMYA--------------------------------KCGSYKDCRQVFEKLVNR 409
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ ++WN+MI G ++EA E++ +MQ + + P++ T V LLNAC A+ G IH
Sbjct: 410 DLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIH 469
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ +V + F + V A+I MY +CG + A +FN + +K + W +M+ GLA +G
Sbjct: 470 SRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGA 529
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHS----------------------------- 335
EA+ +F +Q + LKP+ +++ ++L AC+
Sbjct: 530 EALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLV 589
Query: 336 ------GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD-- 387
G V A+ F MT+ I Y+ M+ L +EA KL + +
Sbjct: 590 NMYSMCGSVKDARQVFDRMTQR-----DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGL 644
Query: 388 -PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD--KNESCGYVLMSNLYAASYQFEEAM 444
PD + + ++L+AC G++E AK+ +++ + S G L+S YA F +A+
Sbjct: 645 KPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVST-YAKCGSFSDAL 703
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 205/461 (44%), Gaps = 82/461 (17%)
Query: 1 MKDL---KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFI--W 55
+KDL +++H H+I+ D + ++ G I A V+ ++ + W
Sbjct: 154 VKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQ-CGSIEEARQVWNKLNHTERTVHSW 212
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N ++ G+ Q A+ L +M + R T L + G ++H +
Sbjct: 213 NAMVVGYVQYGYIEEALKLLREMQ-QHGLALGRATTMRLLSSCKSPSALECGREIHVEAM 271
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K L FD + N I+ MYA CG + EAR +FD+++T+ VV+W +I G A CG
Sbjct: 272 KARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETK-SVVSWTIIIGGYADCG------ 324
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+S I A E+F++MQ++ + P+ T +++LNA +
Sbjct: 325 --------------HSEI-----------AFEIFQKMQQEGVVPNRITYINVLNAFSGPA 359
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A++ G+ +H+ ++ E + V TA++ MY KCG + QVF + + L WN+M+
Sbjct: 360 ALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIG 419
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN-----------HS--------- 335
GLA G EA +++ +Q + P+ I+++ +L AC HS
Sbjct: 420 GLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMF 479
Query: 336 ---------------GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
G + A+ F M ++ I ++ M+ L ++GL EA +
Sbjct: 480 DISVQNALISMYARCGSIKDARLLFNKM-----VRKDIISWTAMIGGLAKSGLGAEALAV 534
Query: 381 IRSMPS---DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ M P+ + + S+L+AC ++ ++ +Q+IE
Sbjct: 535 FQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIE 575
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 101/210 (48%), Gaps = 8/210 (3%)
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
A+++ + +Q+Q + + + +L C ++ + G +H ++ +C L+ V A+I
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183
Query: 264 DMYCKCGCPERALQVFNTV--PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
+MY +CG E A QV+N + ++ + WN+MV G GY EA+KL +Q L
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP--SIKHYSCMVDALGRAGLLEEAEK 379
+ + +L++C + ++ + E K + + +C+++ + G + EA +
Sbjct: 244 RATTMRLLSSCKSPSALECGRE---IHVEAMKARLLFDVNVANCILNMYAKCGSIHEARE 300
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ M + + W ++ G+ E+A
Sbjct: 301 VFDKMET-KSVVSWTIIIGGYADCGHSEIA 329
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 169/484 (34%), Positives = 277/484 (57%), Gaps = 2/484 (0%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFID 77
KD +A + +++ + G ++ A + + N+ W +I G+S++ A+ F
Sbjct: 169 KDVVAWTTVIS-GLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNS 227
Query: 78 MLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCG 137
ML + I P +T + A QL G LH V + + + +I MYA CG
Sbjct: 228 ML-SDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCG 286
Query: 138 FLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYV 197
AR +FD + WN+MI G K G +D +R LFD+M + +++NS+I+GY+
Sbjct: 287 DTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYI 346
Query: 198 RNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTI 257
+ +EAL LF +M+ + FTMV LL A A LGA+ QG +H + E +
Sbjct: 347 HGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVY 406
Query: 258 VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN 317
+ TA++DMY KCG E A+ F + + + W++M+ GLA NG A++ F ++
Sbjct: 407 LGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDG 466
Query: 318 LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEA 377
+ +++IAVLTAC+HS +++ + YF M + I+P I+HY CM+D LGR+GLL+EA
Sbjct: 467 FHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEA 526
Query: 378 EKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
L+++MP P+A+IW S+LSACR H N+++A+ AA +++L+ E YV M N+Y S
Sbjct: 527 MDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIYIDS 586
Query: 438 YQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLI 497
Q+E+A + R LM++ ++K G S I V G+VH+F+ G R HP+ E+ +++ ++G +
Sbjct: 587 RQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIVVMMEEIGRRL 646
Query: 498 QEMG 501
+ G
Sbjct: 647 KSAG 650
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 209/427 (48%), Gaps = 18/427 (4%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKP-NLFIWN 56
++ ++HA + +G P +A+ +L C SP+ ++ Y + + P + F+++
Sbjct: 12 VRQATELHALVTTSGRLLHPPSAAHLLNSLTSCISPSDPLHLRYALSLFDRMPCSTFLFD 71
Query: 57 TIIRG-FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGL-ARDGAQLHGRV 114
T +R F SS P I+L+ M + P T+ LFK A+ G G LH
Sbjct: 72 TALRACFRASSGPDRPIILYRRMHGVD-VPPDAFTFHFLFKCCARGGAHVLLGRMLHAAC 130
Query: 115 VKQGLEFD-QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
+ L I + II+MYA G +AR FDE + DVVAW ++I GLAK G +D+
Sbjct: 131 FRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVK-DVVAWTTVISGLAKMGLLDD 189
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+RRL + RN V+W +ISGY R + EA++ F M I P E T++ +L+AC +
Sbjct: 190 ARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQ 249
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK-KGLSCWNS 292
L + G +H + ++ +V A+IDMY KCG RA +VF+ + + +G WN+
Sbjct: 250 LKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQPWNA 309
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
M+ G G+ + A LF ++ D I+F +++T H G++ +A FT M +
Sbjct: 310 MIDGYCKVGHVDIARSLFDQMEDH----DVITFNSLITGYIHGGRLREALLLFTKM-RRH 364
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKL---IRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ ++ A G L + L I + D + +LL K G +E A
Sbjct: 365 GLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEA 424
Query: 410 KQAAKQI 416
A KQ+
Sbjct: 425 MVAFKQM 431
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 160/410 (39%), Positives = 254/410 (61%), Gaps = 3/410 (0%)
Query: 86 PQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLM 145
P LT+ LF A A G +H +K G +FD + ++ MYA G L AR +
Sbjct: 8 PNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQV 67
Query: 146 FDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEA 205
FDE+ T D+ WNS+I G ++ G+++ + LF M SR+ VSW +MISGY +N + +A
Sbjct: 68 FDEM-TVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKA 126
Query: 206 LELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
LE+F +M+ ++ ++P+E T+ S+ +ACAKLGA+ GE I ++ N N V +++
Sbjct: 127 LEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLE 186
Query: 265 MYCKCGCPERALQVFNTVPKK-GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
MY +CG + A VFN + K+ L WNSM+ GLA++G NEA++L+ + ++PD +
Sbjct: 187 MYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDV 246
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F+ ++ AC H G V + F M + I P ++HY CMVD LGRAG L+EA L++S
Sbjct: 247 TFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKS 306
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
MP PD++IWG+LL AC H N+E A+ AA+ + +++ YV++ N+YA++ +++
Sbjct: 307 MPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQRWDGV 366
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+ R LMK +I K G S+IE +GE+H+F+ + HP+ E+Y LLN++
Sbjct: 367 AKLRKLMKGGQITKAAGYSVIEGEGEIHKFIVEDKSHPRHYEIYALLNEI 416
>gi|357450099|ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 740
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 282/506 (55%), Gaps = 30/506 (5%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
LK+IH +I TGL+ S ++ S ++ YA+ +F I P +F++NT+I
Sbjct: 165 LKQIHTQIITTGLSFQTYCLSHLIKI--SSKFNLPYAFKIFNYISNPTIFLYNTLISSLI 222
Query: 64 QSSTPRN---AILLFIDMLVTSPIQPQRLTYPSLFKA-YAQLGLARDGAQLHGRVVK-QG 118
+ A L+ +L +QP T+PSLFKA + G LH V+K
Sbjct: 223 NQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCSNQSWFHYGPLLHTHVLKFLQ 282
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
FD F+ +++ YA G + +R +FD ++ E D+ WN ++ A+ F
Sbjct: 283 PPFDNFVQASLLNFYAKYGKMCVSRYIFDRIN-EPDLATWNVILNAYARSSSYHSYSNSF 341
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFK-EALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
D + F E+L LFR+MQ I+P+E T+V+L++AC+ LGA+
Sbjct: 342 D-------------------DADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAV 382
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS--CWNSMVF 295
QG W+H F++ N ++N V TA +DMY KCGC A QVF+ +P+ C+ +M+
Sbjct: 383 SQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIG 442
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
G A++GY N+A++L+ ++ L PD +F+ + AC+H G V + + F M E + ++
Sbjct: 443 GFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVE 502
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P ++HY C++D LGRAG L+EAE+ + MP P+A++W SLL A R HGN+ + + A +
Sbjct: 503 PKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTK 562
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+IEL+ S YVL+SN+YA+ + + R LMK + K PG SL+E+ G +HEF+
Sbjct: 563 LIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLT 622
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQEMG 501
G R HP + E+YL + ++ ++E G
Sbjct: 623 GDRSHPFSKEIYLKIAEINSRLEEYG 648
>gi|110741594|dbj|BAE98745.1| hypothetical protein [Arabidopsis thaliana]
Length = 527
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 280/497 (56%), Gaps = 37/497 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASR-ILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNT 57
+ + K++HA IK L ++ +LA C +NYA +F I P F +NT
Sbjct: 43 IDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNT 102
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IRG+ + A+ + +M+ +P TYP L KA +L R+G Q+HG+V K
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGN-EPDNFTYPCLLKACTRLKSIREGKQIHGQVFKL 161
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GLE D F+ N++I MY CG E++ S +
Sbjct: 162 GLEADVFVQNSLINMYGRCG--------------------------------EMELSSAV 189
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGA 236
F+K+ S+ SW+SM+S + E L LFR M E N+K E MVS L ACA GA
Sbjct: 190 FEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGA 249
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G IH FL+ N ELN IV T+++DMY KCGC ++AL +F + K+ +++M+ G
Sbjct: 250 LNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISG 309
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA++G A+++FS + L+PD++ +++VL AC+HSG V + + F M + K++P
Sbjct: 310 LALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEP 369
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ +HY C+VD LGRAGLLEEA + I+S+P + + +IW + LS CR NIE+ + AA+++
Sbjct: 370 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQEL 429
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
++L + Y+L+SNLY+ +++ R + +++ PG S++E+ G+ H FV+
Sbjct: 430 LKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQ 489
Query: 477 GRLHPKAPEVYLLLNDL 493
R HPK E+Y +L+ +
Sbjct: 490 DRSHPKCKEIYKMLHQM 506
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 276/497 (55%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K IH + I+ G AK + S LA S G + A L+F + + + WN+++ G+ Q
Sbjct: 268 KSIHGYAIRAGFAK-LVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P AI +F ML I P +T A A LG LE +F
Sbjct: 327 NGEPEKAIAVFEKML-EEGIDPTGVTIMEALHACADLG---------------DLERGKF 370
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+H + D+++ D+ NS+I +KC +D + +F+ + R
Sbjct: 371 VHKFV-----------------DQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR 413
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
VSWN+MI GY +N + EAL F EM+ +KP FTMVS++ A A+L R +WIH
Sbjct: 414 THVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIH 473
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ +C + N V TA++DMY KCG A ++F+ + + + WN+M+ G +G
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A+ LF ++ ++P+ I++++V++AC+HSG V++ +F M + Y ++PS+ HY M
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG ++EA I +MP P ++G++L AC+ H NIE+ ++AAK++ EL+ +E
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEG 653
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
+VL++N+YA++ ++ + E R M++ ++K PGCS++E+ EVH F +G HP++
Sbjct: 654 GYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSK 713
Query: 485 EVYLLLNDLGLLIQEMG 501
+Y L +L I+ G
Sbjct: 714 RIYAFLEELVYEIKAAG 730
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 169/342 (49%), Gaps = 34/342 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
MK+L +I +IK GL + + +++++ S G IN A VF I +++T+++
Sbjct: 62 MKELHQIIPLVIKNGLYNEHLFQTKLVSLF-SKYGSINEAARVFEPIDDKLDALYHTMLK 120
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G++++S+ A L F+ + ++P + L K + G ++HG+++
Sbjct: 121 GYAKNSSLETA-LAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFA 179
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ F ++ MYA KC +ID++ ++FD+
Sbjct: 180 ANVFAMTGVVNMYA--------------------------------KCRQIDDAYKMFDR 207
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VSWN++I+G+ +N K+ALEL MQ++ +P T+V++L A A +G + G
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ IH + + F + TA+ DMY KCG E A +F+ + +K + WNSM+ G N
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
G +AI +F + + P ++ + L AC G + + K
Sbjct: 328 GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK 369
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 165 LAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
+K G I+E+ R+F+ + + +++M+ GY +N + AL M+ ++KP +
Sbjct: 91 FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNF 150
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
LL C +++G+ IH L+TN F N +T +++MY KC + A ++F+ +P+
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
+ L WN+++ G + NG+ +A++L +Q +PD I+ + VL A G + K
Sbjct: 211 RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKS- 269
Query: 345 FTLMTETYKIKPS----IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSAC 400
Y I+ + + + D + G +E A + M + W S++
Sbjct: 270 ----IHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGM-DQKTVVSWNSMMDGY 324
Query: 401 RKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
++G E A ++++E + + G +M L+A +
Sbjct: 325 VQNGEPEKAIAVFEKMLE-EGIDPTGVTIMEALHACA 360
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 304/540 (56%), Gaps = 46/540 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H H+++ G + + ++ G ++ A VF ++ + WNT++ G++
Sbjct: 993 RSVHGHVVEMGFQWNLHVGNELMGMY-GKIGRMDDARKVFERMAVRSCVSWNTMVSGYAL 1051
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG--------LAR----------- 105
+ A +F M+ ++ ++P +T+ SL ++A+ G R
Sbjct: 1052 NYDCHGASEMF-RMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAE 1110
Query: 106 ----------------DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
+G +HG VVK G E F+ N++I +Y G ++ AR++F E+
Sbjct: 1111 ALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEI 1170
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDK--------MVSRNTVSWNSMISGYVRNVK 201
T+ ++V+WN++I A G DE+ +F + MV N VSW+++I G+ +
Sbjct: 1171 KTK-NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQ 1229
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTA 261
+EALELFR MQ +K + T+ S+L+ CA+L A+ G IH +V + + N +V
Sbjct: 1230 GEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNG 1289
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
+I+MY K G + VF + K L WN+MV G ++G AI+ F + +PD
Sbjct: 1290 LINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPD 1349
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
++F+AVL+AC+H+G V + ++ F M + ++++P ++HY+CMVD LGRAGLL+EA K++
Sbjct: 1350 GVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVV 1409
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
+SMP +P+A +WG+LL++CR H N E+A++ A QI L+ + Y+L+SN+YAAS ++E
Sbjct: 1410 KSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWE 1469
Query: 442 EAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ + R+ K ++K PG S I+V +V+ F AG H + EVY +L DLGL ++ G
Sbjct: 1470 DSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDLGLQMEVEG 1529
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 206/453 (45%), Gaps = 52/453 (11%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKK----PNLFIWNTIIR 60
++IH+ +I TG + A+R+++ G ++ A VF ++ NL +WN+I+R
Sbjct: 889 QQIHSQIIVTGSHRSAFLAARVVSVYAG-FGLVSDAQRVF-EVSPIECFSNLLLWNSILR 946
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
A+ ++ M + T+P + +A A +G + +HG VV+ G +
Sbjct: 947 ANVAHGYCEEALEIYCRMRKLG-VSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQ 1005
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
++ + N ++ MY G + +AR +F+ + V+WN+M+ G A + + +F
Sbjct: 1006 WNLHVGNELMGMYGKIGRMDDARKVFERMAVR-SCVSWNTMVSGYALNYDCHGASEMFRM 1064
Query: 181 MVSR----NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
M S N V+W S++S + R + E +ELF M+ + I + + +L+ L A
Sbjct: 1065 MGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAA 1124
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+G+ IH ++V FE V ++I +Y K G A +F + K + WN+++
Sbjct: 1125 FDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISS 1184
Query: 297 LAMNGYENEAIKLFSGLQSSN----LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
A G+ +EA +F L+ ++ ++P+ +S+ AV+ G+ +A + F M +
Sbjct: 1185 YADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRM-QLA 1243
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
K+K +++ S+LS C + + + ++
Sbjct: 1244 KVK--------------------------------ANSVTIASVLSVCAELAALHLGREI 1271
Query: 413 AKQIIE--LDKNESCGYVLMSNLYAASYQFEEA 443
++ +D N G L+ N+Y S F+E
Sbjct: 1272 HGHVVRSLMDGNILVGNGLI-NMYTKSGSFKEG 1303
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 324 bits (830), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 250/367 (68%), Gaps = 4/367 (1%)
Query: 132 MYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNS 191
MY CG LS AR +FDE+ + +V+ W SM+ G GE+D++R LF++ ++ V W +
Sbjct: 1 MYCKCGCLSVARKIFDEMPHK-NVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTA 59
Query: 192 MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
MI+GYV+ F EA+ LF+EMQ Q +KP +F +V+LL CA++GA+ QG WIH ++
Sbjct: 60 MINGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKG 119
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
++ +V T++I+MY KCGC E+AL++F + +K + W S++ GLAMNG ++A++LFS
Sbjct: 120 IPVDAVVGTSLIEMYSKCGCIEKALRIFCGLREKDTATWTSIICGLAMNGKTSKALELFS 179
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA 371
++ PD ++FI VL+AC+H G V + +++F MT Y I+P ++HY C++D LGRA
Sbjct: 180 KMKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGRA 239
Query: 372 GLLEEAEKLIRSMPSDPDAII---WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYV 428
G L+EAE+LI+ + + + II +GSLLSACR + N++M ++ A+Q+++++ +S +
Sbjct: 240 GQLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKIESRDSSVHT 299
Query: 429 LMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYL 488
L++N+YA++ ++ + R MK++ ++K PGCS IEVDG VHEF+ G + E+Y
Sbjct: 300 LLANIYASAGRWVDVNRVRREMKDLGVKKVPGCSSIEVDGIVHEFLVGNPSCSEMREIYS 359
Query: 489 LLNDLGL 495
+L+ + L
Sbjct: 360 MLDRMRL 366
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 38/236 (16%)
Query: 19 DPIAASRILAFCTSPAGDINYAYL-----VFTQIKKPNLFIWNTIIRGFSQSSTPRNAIL 73
D + ++ + + +G +NY L +F + ++ +W +I G+ Q + A+
Sbjct: 16 DEMPHKNVICWTSMVSGYVNYGELDKARELFERSPVKDVVLWTAMINGYVQFNHFDEAVA 75
Query: 74 LFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMY 133
LF +M + ++P + +L AQ+G G +HG + ++G+ D + ++I MY
Sbjct: 76 LFQEMQIQR-VKPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMY 134
Query: 134 ANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMI 193
+ CG + +A +F + E D W S+I GLA
Sbjct: 135 SKCGCIEKALRIFCGL-REKDTATWTSIICGLA--------------------------- 166
Query: 194 SGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
N K +ALELF +M++ P E T + +L+AC+ G + +G N + +
Sbjct: 167 ----MNGKTSKALELFSKMKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTS 218
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 161/398 (40%), Positives = 247/398 (62%), Gaps = 5/398 (1%)
Query: 88 RLTYPSL-FKAYAQLGLARD--GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL 144
R +PSL A A++ R G QLH +V+ GL D + ++I Y +CG ++ AR
Sbjct: 66 RRIHPSLSLNAAAKIPHLRGTLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARS 125
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+FD+ T+ D+ WN MI G K G + +R LFD M +RN VSW ++I Y + + E
Sbjct: 126 VFDQT-TDKDIFCWNVMISGYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVE 184
Query: 205 ALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
A+E+FR MQ E+ I+P ++S+L+AC LGA+ GEW+H F+V ++ AII
Sbjct: 185 AVEVFRRMQVEEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAII 244
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY K GC +A++VF + +K + W +++ G A++G EAI++F ++ N+ P+ +
Sbjct: 245 DMYVKLGCVRKAVEVFEGMDQKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDV 304
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F+A+L+AC+H G + + YF +M Y+IK ++HY CMVD LGRAG L EA+ L++
Sbjct: 305 TFLAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQD 364
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
MP +A IWG+LL+A R HG+ E+ KQA +IEL+ + S Y+L+SN+YA ++++
Sbjct: 365 MPFKANAAIWGALLAAARTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDV 424
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ R MK+ + PG S IEVDG VHEF + HP
Sbjct: 425 SKLRKQMKDRGLRNVPGASSIEVDGMVHEFTSRDGSHP 462
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 138/331 (41%), Gaps = 70/331 (21%)
Query: 6 KIHAHLIKTGLAKDP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWN-------- 56
++H+ +++ GLA D ++AS I + + G + A VF Q ++F WN
Sbjct: 90 QLHSVIVRAGLASDAHVSASLIQTYFS--CGRVASARSVFDQTTDKDIFCWNVMISGYVK 147
Query: 57 -----------------------TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
T+I ++Q P A+ +F M V I+P + S
Sbjct: 148 SGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLS 207
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ A LG G +H VV++GL + + N II MY G + +A +F+ +D +
Sbjct: 208 VLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQK- 266
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
VV W ++I G A G EA+E+FR M+
Sbjct: 267 SVVTWTTVIAGFALHG-------------------------------LGLEAIEMFRRME 295
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGC 271
+N+ P++ T +++L+AC+ +G G W +V+ + + V ++D+ + G
Sbjct: 296 MENVAPNDVTFLAILSACSHVGLTDLGRWYFKIMVSQ-YRIKQRVEHYGCMVDLLGRAGY 354
Query: 272 PERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
A + +P K + W +++ +G
Sbjct: 355 LMEAQDLVQDMPFKANAAIWGALLAAARTHG 385
>gi|297851626|ref|XP_002893694.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339536|gb|EFH69953.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 174/497 (35%), Positives = 283/497 (56%), Gaps = 37/497 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASR-ILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNT 57
+ + K++HA IK L ++ +LA C +NYA +F I P F + T
Sbjct: 44 IDEFKQVHARFIKLSLFCSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFKT 103
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IRG+ + A+ + +M+ I+P TYP L KA +L R+G Q+HG V K
Sbjct: 104 MIRGYVNEMSFEVALCFYNEMM-ERGIEPDNFTYPCLLKACTRLKAIREGKQIHGHVFKL 162
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GLE D F+ N++I MY +CGE++ S +
Sbjct: 163 GLEADVFVQNSLINMYG--------------------------------RCGEMELSSTV 190
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGA 236
F+K+ ++ SW+SM S V + E L LFREM +E N+K E MVS L+ACA GA
Sbjct: 191 FEKLEFKSAASWSSMFSACVGMGMWSECLMLFREMCRETNLKAEESGMVSALSACANTGA 250
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G IH FL+ N ELN IV T+++DMY KCGC + AL +F + K+ +++M+ G
Sbjct: 251 LNLGMSIHGFLLRNISELNIIVKTSLVDMYVKCGCIDNALHIFQKMEKRNNLTYSAMISG 310
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
A++G A+++FS + L+PD++ ++++L AC+HSG V + + F M + K++P
Sbjct: 311 FALHGEGESALRMFSEMIKEGLEPDHVVYVSLLNACSHSGLVKEGRRVFGEMLKEGKVEP 370
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ +HY C+VD LGRAGLLEEA + I+S+P + + ++W S LS CR H NIE+ + AA+++
Sbjct: 371 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEQNDVVWRSFLSQCRVHQNIELGQIAAQEL 430
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
++L + Y+L+SN+Y+ ++ +++ R + +++ PG S ++V G+ H FV+
Sbjct: 431 LKLCSHNPGDYLLISNMYSQAHMWDDVARSRTEIAIKGLKQTPGFSTVKVKGKTHRFVSQ 490
Query: 477 GRLHPKAPEVYLLLNDL 493
R HP+ E+Y +L+ +
Sbjct: 491 DRSHPQCKEIYKMLHQM 507
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 289/495 (58%), Gaps = 35/495 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
+++ K++H ++K GL D +S +LA C S ++YA +F Q+ +P F +NT+I
Sbjct: 45 LEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYACSIFQQLDEPTTFDFNTMI 104
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+ + NAI L+ DML ++P TYP + KA A+L + ++G Q+HG V K GL
Sbjct: 105 RGYVNNMNFENAIYLYNDML-QREVEPDNFTYPVVLKACARLAVIQEGMQIHGHVFKLGL 163
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D ++ N++I MY KC +I+ S +F
Sbjct: 164 EDDVYVQNSLINMYG--------------------------------KCRDIEMSCAIFR 191
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI-KPSEFTMVSLLNACAKLGAIR 238
+M ++ SW+++I+ + + E L LF +M + + E +V++L+AC LGA
Sbjct: 192 RMEQKSVASWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAFH 251
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G H L+ N ELN V+T+++DMY KCG ++ L +F + +K ++ ++ GL
Sbjct: 252 LGRCAHGSLLKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLG 311
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++GY +A+++FS + L+PD +++++VL+AC+HSG V++ D F M Y+I+P++
Sbjct: 312 LHGYGRQALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTM 371
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD GRAGLLEEA +L++SMP + ++W SLLSAC+ H N+++ + AA+ +
Sbjct: 372 QHYGCMVDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHDNLKLGEIAAENLFR 431
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L + Y+++SN+YA + Q+E A + R M + + PG SL+EV +V++FV+ +
Sbjct: 432 LSSHNPSDYLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSLVEVKSKVYKFVSQDK 491
Query: 479 LHPKAPEVYLLLNDL 493
+ K+ +Y +++ +
Sbjct: 492 SYCKSGNIYKMIHQM 506
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 175/495 (35%), Positives = 287/495 (57%), Gaps = 38/495 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M++ K++HA ++K ++ AS ++A C S G ++YA +F QI +P F +NT+I
Sbjct: 1 MEEFKQVHAQVLKW---ENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMI 57
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+ NA+ L+ +ML ++ TYP+LFKA A L +G Q+HG + K+GL
Sbjct: 58 RGYVNVMNMENALFLYYEML-ERGVESDNFTYPALFKACASLRSIEEGMQIHGYIFKRGL 116
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D F+ N++I MY CG + + +F+ +D DV +W+++I A G
Sbjct: 117 EGDLFVQNSLINMYGKCGKIELSCSVFEHMDRR-DVASWSAIIAAHASLG---------- 165
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIR 238
+ E L +F EM +E + +P E +VS+L+AC LGA+
Sbjct: 166 ---------------------MWSECLSVFGEMSREGSCRPEESILVSVLSACTHLGALD 204
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G H L+ N E+N IV T++IDMY KCGC E+ L +F + KK ++ M+ GLA
Sbjct: 205 LGRCTHVTLLRNIREMNVIVQTSLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLA 264
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
M+G EA+++FS + LKPD + ++ VL+ACNH+G V++ F M + I+P+I
Sbjct: 265 MHGRGMEALQVFSDMLEEGLKPDDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTI 324
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY C+V +GRAG+L +A + IRSMP P+ ++W LLSAC+ H N+E+ + AAK + E
Sbjct: 325 QHYGCIVHLMGRAGMLNKALEHIRSMPIKPNEVVWRGLLSACKFHHNLEIGEIAAKSLGE 384
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ + YV++SN+YA + ++E+ + R M + PG SL++V+ ++++FV+
Sbjct: 385 LNSSNPGDYVVLSNMYARAKRWEDVAKIRTEMARKGFTQTPGFSLVQVERKIYKFVSQDM 444
Query: 479 LHPKAPEVYLLLNDL 493
HP+ +Y +++ +
Sbjct: 445 SHPQCKGMYEMIHQM 459
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 285/505 (56%), Gaps = 37/505 (7%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S +G++ VF Q+ + +NT+I GFS + A+ F+ M + T+
Sbjct: 100 SKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ-EEGFESTDYTH 158
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
S+ A +QL + G Q+HGR+V L F+ N + MYA CG L +AR +FD +
Sbjct: 159 VSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVN 218
Query: 152 EFDVVAWNSMIIGLAK-----------------------------------CGEIDESRR 176
+ +VV+WNSMI G + CG IDE+ +
Sbjct: 219 K-NVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACK 277
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
F ++ ++ V W +M+ G +N K ++AL LFREM +N++P FT+ S++++CA+L +
Sbjct: 278 TFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLAS 337
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ QG+ +H V + + +V +A++DMY KCG A VF + + + WNSM+ G
Sbjct: 338 LCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILG 397
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
A NG + EA+ L+ + NLKPD I+F+ VL+AC H+G V + + YF +++ + + P
Sbjct: 398 YAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNP 457
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ HYSCM++ LGRAG +++A LI+SM +P+ +IW +LLS CR + ++ + AA+ +
Sbjct: 458 TFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHL 517
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
ELD + + Y+++SN+YAA ++++ R LMK KI+K S IE+D +VH+FVA
Sbjct: 518 FELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAE 577
Query: 477 GRLHPKAPEVYLLLNDLGLLIQEMG 501
R H + ++Y LN L +QE G
Sbjct: 578 DRTHSETEQIYEELNRLIKKLQESG 602
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 162/284 (57%), Gaps = 9/284 (3%)
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+ N ++++YA G LS+AR +FD++ + DV +WN+M+ +K G +++ R +FD+M
Sbjct: 57 DTFLQNRLLHLYAKSGNLSDARDLFDKM-SRRDVFSWNAMLSAYSKSGNVEDLRAVFDQM 115
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+ VS+N++I+G+ N +ALE F MQE+ + +++T VS+L+AC++L I++G+
Sbjct: 116 SVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGK 175
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH +V + V A+ +MY KCG ++A +F+ + K + WNSM+ G NG
Sbjct: 176 QIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNG 235
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
KLF +QSS L PD ++ +L+A G +++A F + E K+ +
Sbjct: 236 QPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVC-----W 290
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRK 402
+ M+ + G E+A L R M + PD S++S+C +
Sbjct: 291 TTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCAR 334
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H + G+ D + +S ++ S G+ A++VF ++ N+ WN++I G++Q
Sbjct: 342 QAVHGKAVIFGVDHDLLVSSALVDM-YSKCGETADAWIVFKRMLTRNVISWNSMILGYAQ 400
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG-------AQLHGRVVKQ 117
+ A+ L+ +ML ++P +T+ + A GL G +++HG
Sbjct: 401 NGKDLEALALYEEML-HENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHG----M 455
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
FD + + +I + G++ +A + + E + + W++++
Sbjct: 456 NPTFDHY--SCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLL 498
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 324 bits (830), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 292/496 (58%), Gaps = 10/496 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M +K++HAH ++TG+ + R+L ++ YA +F + P +F++N +I+
Sbjct: 1 MNQIKQLHAHCLRTGVDETKDLLQRLLLI-----PNLVYARKLFDLHRNPCIFLYNKLIQ 55
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+S P +I+L+ ++L I+P T+ +F A A AR LH + + G E
Sbjct: 56 SYSVHHQPHESIVLY-NLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F +I YA G L AR +FDE+ DV WN+MI G + G++ + LFD
Sbjct: 115 SDSFCCTALITAYAKLGALCCARRVFDEMSNR-DVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQ 239
M ++N SW ++ISG+ +N + EAL +F M+ ++++KP+ T+VS+L ACA LG +
Sbjct: 174 MPNKNVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEI 233
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLA 298
G + + N F N V A ++MY KCG + A ++F+ + ++ L WNSM+ LA
Sbjct: 234 GRRLEGYARENGFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQRNLISWNSMIGSLA 293
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +EA++L++ + +PD ++F+ +L AC H G V + K+ M E +KI P +
Sbjct: 294 THGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKL 353
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CM+D LGR G L+EA LI++MP PDA++WG+LL AC HGN+E+A+ A++ +++
Sbjct: 354 EHYGCMIDLLGRVGKLQEACDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALMK 413
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS-LIEVDGEVHEFVAGG 477
L+ V+MSN+YAA+ +++ + R LMK+ + K G S +E EVH+F
Sbjct: 414 LEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEAGVEVHKFTVED 473
Query: 478 RLHPKAPEVYLLLNDL 493
+ HP++ E+Y +L+++
Sbjct: 474 KSHPRSYEIYQVLDEI 489
>gi|357150569|ref|XP_003575504.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 548
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 178/518 (34%), Positives = 285/518 (55%), Gaps = 42/518 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQI--KKPNLFIWNTIIRGF 62
+++HA L+ GL AA ++A +SP YA +F + N+++W + +
Sbjct: 25 RQLHAQLLLRGLPLPARAAVTLIASSSSP----QYARAIFDSVPAASANVYLWTATVSSY 80
Query: 63 SQSSTPR---NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
++ ++P A LF+ ML + P +P T S+ K+ ++L A Q+HG +VK GL
Sbjct: 81 AKHASPALAAEAFPLFMFMLRSGP-RPNGFTVSSVLKSLSKLRAAHQVCQVHGFLVKAGL 139
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ T++ Y N + +AR +FDE+ +VV N+M+ G K G+++ +R++FD
Sbjct: 140 ASSLHVGATLLDSYGNLCRVKDARRVFDEMPRS-NVVVGNAMVSGYVKAGDVEAARQVFD 198
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI---------------------- 217
MV R+++SWN+++SGY+R A +LF EM ++N+
Sbjct: 199 GMVERDSISWNTLMSGYLRRGDAGLARDLFDEMPQRNVNSWNMMISACSEVGLWADSVAV 258
Query: 218 ---------KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
+P TM L++ACA+LG + ++ L C E+N V +++DM+ K
Sbjct: 259 FNQMRFMSFRPDAATMAVLMSACAQLGFLSVARQVYGLLRKGCVEMNCHVHNSLVDMFAK 318
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CGC A +F + K + +N MV LA +G+ +A+KLF + L+PD ++F+ V
Sbjct: 319 CGCFSEAHLLFAEMDPKDVVSYNVMVSALAHHGHGKDALKLFEQMIEGGLQPDAVTFLGV 378
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC H+G V+ K YF M TY I+ S HY+CMVD GR GL+EEA ++ MP P
Sbjct: 379 LSACAHAGLVDSGKYYFETMGTTYAIEKSADHYACMVDLYGRVGLIEEAHYFVKIMPVKP 438
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
A IWG+LL+ACRKH NI++ + AA+++I ++ YVL+SN A S Q++ + R
Sbjct: 439 HAGIWGALLNACRKHCNIDVGEVAARELIRIEPMNPGNYVLLSNTLAWSQQWDAVGDVRQ 498
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
LM+ I+K G S +EV+ VHEF+ G HP E+
Sbjct: 499 LMRGNGIDKNTGFSWVEVESVVHEFLMGDFSHPSFDEI 536
>gi|15222513|ref|NP_174474.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169173|sp|Q9C6T2.1|PPR68_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31920
gi|12321292|gb|AAG50713.1|AC079041_6 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193295|gb|AEE31416.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 280/497 (56%), Gaps = 37/497 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASR-ILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNT 57
+ + K++HA IK L ++ +LA C +NYA +F I P F +NT
Sbjct: 43 IDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNT 102
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IRG+ + A+ + +M+ +P TYP L KA +L R+G Q+HG+V K
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGN-EPDNFTYPCLLKACTRLKSIREGKQIHGQVFKL 161
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GLE D F+ N++I MY CG E++ S +
Sbjct: 162 GLEADVFVQNSLINMYGRCG--------------------------------EMELSSAV 189
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGA 236
F+K+ S+ SW+SM+S + E L LFR M E N+K E MVS L ACA GA
Sbjct: 190 FEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGA 249
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G IH FL+ N ELN IV T+++DMY KCGC ++AL +F + K+ +++M+ G
Sbjct: 250 LNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISG 309
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA++G A+++FS + L+PD++ +++VL AC+HSG V + + F M + K++P
Sbjct: 310 LALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEP 369
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ +HY C+VD LGRAGLLEEA + I+S+P + + +IW + LS CR NIE+ + AA+++
Sbjct: 370 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQEL 429
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
++L + Y+L+SNLY+ +++ R + +++ PG S++E+ G+ H FV+
Sbjct: 430 LKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQ 489
Query: 477 GRLHPKAPEVYLLLNDL 493
R HPK E+Y +L+ +
Sbjct: 490 DRSHPKCKEIYKMLHQM 506
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 260/454 (57%), Gaps = 6/454 (1%)
Query: 31 TSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLT 90
T+ ++N Q + W + I S+ A F DM + + I+P +T
Sbjct: 12 TTRKNNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRL-AGIEPNHIT 70
Query: 91 YPSLFKAYAQLGLARDGAQ--LHGRVVKQGLEFDQFIHNT-IIYMYANCGFLSEARLMFD 147
+ SL A + LHG K GL+ + T I+ MY+ G + +ARL+FD
Sbjct: 71 FISLLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFD 130
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
++ + + V WN+MI G + G++D + ++FD+M R+ +SW +MI+G+V+ +EAL
Sbjct: 131 YMEDK-NSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALA 189
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
FREMQ + P +++ L AC LGA+ G W H ++V+ F N V ++ID+YC
Sbjct: 190 WFREMQISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYC 249
Query: 268 KCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIA 327
+CGC E A QVF+T+ K+ + WNS++ G A NG NE++ F +Q KPD ++F
Sbjct: 250 RCGCVEFARQVFDTMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTG 309
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
LTAC+H G V + YF +M Y+I P I+H+ C+VD RAG LE+A K++ SMP
Sbjct: 310 ALTACSHVGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMK 369
Query: 388 PDAIIWGSLLSACRKHGNIE-MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
P+ ++ GSLL+ACR HGN +A++ K I +LD YV++SN+YAA ++E A +
Sbjct: 370 PNEVVIGSLLAACRNHGNHTILAERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASKM 429
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
R MK + ++K+PG S IE+D H F+AG H
Sbjct: 430 RRKMKGLGLKKQPGYSSIEIDDYTHVFMAGDNAH 463
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 125/311 (40%), Gaps = 65/311 (20%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL + + + S G + A LVF ++ N WNT+I G+ ++
Sbjct: 92 LHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMRNG 151
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
NA+ +F +M + S + P + +
Sbjct: 152 QVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAALA 211
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A LG G H VV Q + + N++I +Y CG + AR +FD ++ VV
Sbjct: 212 ACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKR-TVV 270
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G +ES L FR+MQE+
Sbjct: 271 SWNSVIVGFAANGNANES-------------------------------LVYFRKMQEEG 299
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCPER 274
KP T L AC+ +G + +G + T+ + ++ + ++D+Y + G E
Sbjct: 300 FKPDAVTFTGALTACSHVGLVEEGFQYFQMMKTD-YRISPRIEHFGCLVDLYSRAGRLED 358
Query: 275 ALQVFNTVPKK 285
A++V ++P K
Sbjct: 359 AIKVVESMPMK 369
>gi|449519932|ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 181/500 (36%), Positives = 281/500 (56%), Gaps = 38/500 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYA-YLVFTQIKKPNLFIWNTIIRG 61
L +IHA ++ +GL D + +L SP+ +++Y L+F WN IIRG
Sbjct: 46 LFEIHAQILVSGLQNDSFFTTELLRVAALSPSRNLSYGCSLLFHCHFHSATMPWNFIIRG 105
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+S S +P+ AI LF +M ++P LT+P L KA A L ++G Q H +K GL+
Sbjct: 106 YSSSDSPQEAISLFGEMR-RRGVRPNNLTFPFLLKACATLATLQEGKQFHAIAIKCGLDL 164
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D ++ NT+I Y + C + +R++FD+M
Sbjct: 165 DVYVRNTLINFYGS--------------------------------CKRMSGARKVFDEM 192
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R VSWN++I+ V N F EA++ F +M +P E TMV +L+ACA+LG + G
Sbjct: 193 TERTLVSWNAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGR 252
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
W+H+ +V LN + TA +DMY K G A VFN + +K + W++M+ GLA +G
Sbjct: 253 WVHSQVVGRGMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHG 312
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ NEAI+LF+ + SS + P++++FI VL AC+H+G V+++ YF LM Y IKP + HY
Sbjct: 313 FANEAIELFTNMTSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYGIKPMMIHY 372
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK---HGNIEMAKQAAKQIIE 418
MVD LGRAG ++EA +LI SMP +PD I+W +LLSAC +G E+A++A K+++E
Sbjct: 373 GSMVDVLGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVNGGAEVAEEARKRLLE 432
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ V+++N +A +++A + R MK+ I+K G S IE+ G + +F +G
Sbjct: 433 LEPKRGGNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGESCIELGGSLRKFFSGFD 492
Query: 479 LHPKAPEVYLLLNDLGLLIQ 498
+Y LL+ L L +Q
Sbjct: 493 SRAAPDGIYDLLDGLNLHMQ 512
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 276/467 (59%), Gaps = 4/467 (0%)
Query: 38 NYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA 97
+ A +F Q+ P++ WN+II G+ A+ F ML +S ++P + T S+ A
Sbjct: 228 DLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSA 287
Query: 98 YAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT-EFDVV 156
A + G Q+H +V+ ++ + N +I MYA G + A + + T +V+
Sbjct: 288 CANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVI 347
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
A+ S++ G K G+ID +R +FD + R+ V+W +MI GY +N +AL LFR M +
Sbjct: 348 AFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREG 407
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV-TAIIDMYCKCGCPERA 275
KP+ +T+ ++L+ + L ++ G+ +H + E++++ V A+I MY + G + A
Sbjct: 408 PKPNNYTLAAVLSVISSLASLDHGKQLHAVAI-RLEEVSSVSVGNALITMYSRSGSIKDA 466
Query: 276 LQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
++FN + + W SM+ LA +G NEAI+LF + NLKPD+I+++ VL+AC H
Sbjct: 467 RKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTH 526
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
G V Q K YF LM + I+P+ HY+CM+D LGRAGLLEEA IR+MP +PD + WG
Sbjct: 527 VGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWG 586
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
SLLS+CR H +++AK AA++++ +D N S Y+ ++N +A ++E+A + R MK+
Sbjct: 587 SLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKA 646
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++KE G S +++ +VH F LHP+ +Y +++ + I++MG
Sbjct: 647 VKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMG 693
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 199/407 (48%), Gaps = 37/407 (9%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ AG+++ A VF +I +P+ W T+I G++ ++A+ F+ M V+S I P + T+
Sbjct: 90 AKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRM-VSSGISPTQFTF 148
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
++ + A G ++H VVK G + N+++ MYA CG A+++FD +
Sbjct: 149 TNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRL 208
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ D WN+MI + + D + LFD+M + VSWNS+I+GY ALE F
Sbjct: 209 K-DTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSF 267
Query: 212 M-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV---------------------- 248
M + ++KP +FT+ S+L+ACA +++ G+ IH +V
Sbjct: 268 MLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSG 327
Query: 249 -----------TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
T LN I T+++D Y K G + A +F+++ + + W +M+ G
Sbjct: 328 AVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGY 387
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A NG ++A+ LF + KP+ + AVL+ + ++ K + ++ S
Sbjct: 388 AQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVS-S 446
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ + ++ R+G +++A K+ + S D + W S++ + +HG
Sbjct: 447 VSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHG 493
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 177/378 (46%), Gaps = 47/378 (12%)
Query: 107 GAQLHGRVVKQGLEF-DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL 165
G +H R++K GL + F+ N ++ +Y G S+A +FDE+ + +WN+++
Sbjct: 31 GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLK-TTFSWNTILSAH 89
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 225
AK G +D +RR+FD++ ++VSW +MI GY FK A+ F M I P++FT
Sbjct: 90 AKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFT 149
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
++L +CA A+ G+ +H+F+V V ++++MY KCG A VF+ + K
Sbjct: 150 NVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLK 209
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
S WN+M+ + A+ LF + PD +S+ +++T H G +A + F
Sbjct: 210 DTSTWNTMISMHMQFCQFDLALALFDQMTD----PDIVSWNSIITGYCHQGYDIRALETF 265
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+ M ++ +K PD GS+LSAC +
Sbjct: 266 SFMLKSSSLK--------------------------------PDKFTLGSVLSACANRES 293
Query: 406 IEMAKQAAKQII--ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
+++ KQ I+ ++D + G L+S +YA S E A + V+I P ++
Sbjct: 294 LKLGKQIHAHIVRADVDIAGAVGNALIS-MYAKSGAVEVA------HRIVEITGTPSLNV 346
Query: 464 IEVDGEVHEFVAGGRLHP 481
I + + G + P
Sbjct: 347 IAFTSLLDGYFKIGDIDP 364
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 132/304 (43%), Gaps = 40/304 (13%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GDI+ A +F +K ++ W +I G++Q+ +A++LF M+ P +P T ++
Sbjct: 360 GDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGP-KPNNYTLAAV 418
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
+ L G QLH ++ + N +I MY+ G + +AR +F+ + + D
Sbjct: 419 LSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRD 478
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+ W SMI+ LA+ G +E A+ELF +M
Sbjct: 479 TLTWTSMILSLAQHGLGNE-------------------------------AIELFEKMLR 507
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV-TNCFELNTIVVTAIIDMYCKCGCPE 273
N+KP T V +L+AC +G + QG+ N + + E + +ID+ + G E
Sbjct: 508 INLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLE 567
Query: 274 RALQVFNTVP-KKGLSCWNSMVFGLAMNGYEN----EAIKLFSGLQSSNLKPDYISFIAV 328
A +P + + W S++ ++ Y + A KL L N Y++
Sbjct: 568 EAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLL--LIDPNNSGAYLALANT 625
Query: 329 LTAC 332
L+AC
Sbjct: 626 LSAC 629
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 171/468 (36%), Positives = 282/468 (60%), Gaps = 11/468 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K HA IKTG D S ++ T G ++ A VF ++ L +WN ++R + +
Sbjct: 69 RKAHAAAIKTGFRWDAYTGSSLMEMYTM-LGRVDIARKVFDEMPSRALVLWNMMVRCYIR 127
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD---GAQLHGRVVKQGLEF 121
A+ L + + S + P R+T L A ARD G ++H + F
Sbjct: 128 CGRYSAAVALS-EQMERSGVTPDRVT---LVTAVTACSRARDLSLGRRIH-VYMDNVFGF 182
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ + N ++ MY L EA +F+++ ++++W ++ G G++D++R LF++
Sbjct: 183 NLPVANALLDMYTKNDCLEEAVKLFEQMPAR-NIISWTILVSGYGLAGQLDKARVLFNQC 241
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ + W +MI+ V++ F+EAL LFR+MQ Q ++P FT+V+LL CA LGA+ QGE
Sbjct: 242 KEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGE 301
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
WIH + +++ ++ TA+IDMY KCG E++L+VF + + + W +++ GLA NG
Sbjct: 302 WIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNG 361
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
A++LF +Q S +KPD ++FI VL+AC H G V++ + F M E Y+I+P ++HY
Sbjct: 362 QAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHY 421
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAI-IWGSLLSACRKHGNIEMAKQAAKQIIELD 420
SC+V+ LGRAGLL+EAE+LI +P + DA+ ++G+LL+AC+ HGN+EM+++ K+I E D
Sbjct: 422 SCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQD 481
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
+ +LMSN+YA + ++E+ + R M ++K GCSLIEV G
Sbjct: 482 SQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKTAGCSLIEVKG 529
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 164/381 (43%), Gaps = 67/381 (17%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N +IR ++ + + ++ D L + TYP + +A L L+ +G + H +
Sbjct: 18 NVLIRTLARRGSFARVMAVYYD-LRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAI 76
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G +D + ++++ MY G + AR +FDE+ + +V WN M+ +C
Sbjct: 77 KTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSR-ALVLWNMMV----RC------- 124
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
Y+R ++ A+ L +M+ + P T+V+ + AC++
Sbjct: 125 --------------------YIRCGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSRAR 164
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV- 294
+ G IH ++ N F N V A++DMY K C E A+++F +P + + W +V
Sbjct: 165 DLSLGRRIHVYM-DNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVS 223
Query: 295 -FGLA-----------------------------MNGYENEAIKLFSGLQSSNLKPDYIS 324
+GLA +G EA+ LF +Q ++PD +
Sbjct: 224 GYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFT 283
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
+ +LT C + G ++Q ++ E K+K + ++D + G +E++ ++ M
Sbjct: 284 VVTLLTCCANLGALDQG-EWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRM 342
Query: 385 PSDPDAIIWGSLLSACRKHGN 405
DA W +++ +G
Sbjct: 343 QG-RDATAWTAIICGLATNGQ 362
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 16/274 (5%)
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
N +I R F + ++ +++ + + FT +L A L +G H +
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAIK 77
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
F + +++++MY G + A +VF+ +P + L WN MV G + A+ L
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAVAL 137
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
++ S + PD ++ + +TAC+ + ++ + M + + + ++D
Sbjct: 138 SEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVAN--ALLDMYT 195
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVL 429
+ LEEA KL MP+ + I W L+S G ++ A+ Q E D +L
Sbjct: 196 KNDCLEEAVKLFEQMPA-RNIISWTILVSGYGLAGQLDKARVLFNQCKEKD------LIL 248
Query: 430 MSNLYAASYQ---FEEAMEERLLMKEVKIEK-EP 459
+ + A Q FEEA+ L +++++++ EP
Sbjct: 249 WTAMINACVQHGCFEEALT---LFRDMQMQRVEP 279
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/459 (36%), Positives = 277/459 (60%), Gaps = 10/459 (2%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
+F ++ + + WNT+I G++Q+ A LF + SP++ T+ ++ Y Q G
Sbjct: 226 IFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE----SPVRDV-FTWTAMVSGYVQNG 280
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ D A+ RV E + N II Y C + +AR +F+ + + +V +WN+MI
Sbjct: 281 ML-DEAR---RVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMI 335
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G A+ G+I ++R FD+M R+++SW ++I+GY ++ +EAL LF EM+ + +
Sbjct: 336 TGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRS 395
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T S L+ CA++ A+ G+ +H +V E V A++ MYCKCG + A VF +
Sbjct: 396 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 455
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
+K + WN+M+ G A +G+ EA+ LF ++ + + PD ++ + VL+AC+H+G V++
Sbjct: 456 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 515
Query: 343 DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
+YF MT+ Y I + KHY+CM+D LGRAG L++A+ L+++MP +PDA WG+LL A R
Sbjct: 516 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 575
Query: 403 HGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS 462
HGN E+ ++AAK I E++ + S YVL+SNLYAAS ++ + RL M++ ++K PG S
Sbjct: 576 HGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 635
Query: 463 LIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+EV ++H F G +HP+ +Y L +L L +++ G
Sbjct: 636 WVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEG 674
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 178/389 (45%), Gaps = 61/389 (15%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKA 97
A +F ++ +L WN +I G + R A LLF M P+R +++ ++
Sbjct: 99 ARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQM-------PERDVVSWNAMLSG 151
Query: 98 YAQLGLARDGAQLHGRV-VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
YAQ G ++ ++ + K + + N ++ Y G + +AR +F E +++++
Sbjct: 152 YAQNGYVKEAKEIFDEMPCKNSISW-----NGMLAAYVQNGRIEDARRLF-ESKADWELI 205
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WN M+ G K + ++R +FD+M R+ VSWN+MISGY +N + EA LF E ++
Sbjct: 206 SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRD 265
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+ FT ++++ + G + + + + + E N++ AII Y +C ++A
Sbjct: 266 V----FTWTAMVSGYVQNGMLDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMDQAR 317
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
++F +P + +S WN+M+ G A NG +A F + + D IS+ A++ SG
Sbjct: 318 ELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMP----QRDSISWAAIIAGYAQSG 373
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
+A F M + E+L RS + S
Sbjct: 374 YGEEALHLFVEMK-------------------------RDGERLNRS--------TFTST 400
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESC 425
LS C + +E+ KQ ++++ C
Sbjct: 401 LSTCAEIAALELGKQVHGRVVKAGLESGC 429
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 35/269 (13%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GDI A F ++ + + W II G++QS A+ LF++M + R T+ S
Sbjct: 342 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE-RLNRSTFTST 400
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A++ G Q+HGRVVK GLE ++ N ++ MY CG + +A ++F+ ++ E +
Sbjct: 401 LSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE-EKE 459
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
VV+WN+MI G Y R+ KEAL LF M++
Sbjct: 460 VVSWNTMIAG-------------------------------YARHGFGKEALMLFESMKK 488
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
I P + TMV +L+AC+ G + +G E+ ++ N+ T +ID+ + G +
Sbjct: 489 TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLD 548
Query: 274 RALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
A + +P + + W +++ ++G
Sbjct: 549 DAQNLMKNMPFEPDAATWGALLGASRIHG 577
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 167/343 (48%), Gaps = 24/343 (6%)
Query: 142 ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVK 201
AR +F+++ T D+V+WN MI G + + +R LFD+M R+ VSWN+M+SGY +N
Sbjct: 99 ARQLFEKMPTR-DLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGY 157
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTA 261
KEA E+F EM +N + +L A + G I + F +EL I
Sbjct: 158 VKEAKEIFDEMPCKN----SISWNGMLAAYVQNGRIEDARRL--FESKADWEL--ISWNC 209
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
++ Y K A +F+ +P++ WN+M+ G A NG EA +LF + S ++ D
Sbjct: 210 MMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF---EESPVR-D 265
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
++ A+++ +G +++A+ F M E + ++ ++ + +++A +L
Sbjct: 266 VFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELF 320
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
+MP + W ++++ ++G+I A+ ++ + D S + + YA S E
Sbjct: 321 EAMPCQ-NVSSWNTMITGYAQNGDIAQARNFFDRMPQRD---SISWAAIIAGYAQSGYGE 376
Query: 442 EAMEERLLMKE--VKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
EA+ + MK ++ + S + E+ G ++H +
Sbjct: 377 EALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGR 419
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 18/261 (6%)
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
T+ D+V WN I + G+ D + RLF+ M R+++SWN+MISG + N KF A +LF
Sbjct: 45 TDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFE 104
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M +++ + +++ C + +R L E + + A++ Y + G
Sbjct: 105 KMPTRDL----VSWNVMISGCVRYRNLRAAR----LLFDQMPERDVVSWNAMLSGYAQNG 156
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
+ A ++F+ +P K WN M+ NG +A +LF S + IS+ ++
Sbjct: 157 YVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF----ESKADWELISWNCMMG 212
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
++ A+ F M E ++ ++ M+ + G L EA++L P D
Sbjct: 213 GYVKRNRLVDARGIFDRMPERDEVS-----WNTMISGYAQNGELLEAQRLFEESPV-RDV 266
Query: 391 IIWGSLLSACRKHGNIEMAKQ 411
W +++S ++G ++ A++
Sbjct: 267 FTWTAMVSGYVQNGMLDEARR 287
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
K++H ++K GL + +L +C G+I+ AY+VF I++ + WNT+I G++
Sbjct: 414 KQVHGRVVKAGLESGCYVGNALLVMYC--KCGNIDDAYIVFEGIEEKEVVSWNTMIAGYA 471
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQ-LHGRVVKQGLEFD 122
+ + A++LF M T I P +T + A + GL G + + G+ +
Sbjct: 472 RHGFGKEALMLFESMKKTG-ILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITAN 530
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ +I + G L +A+ + + E D W +++
Sbjct: 531 SKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/470 (35%), Positives = 270/470 (57%), Gaps = 33/470 (7%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S GD+N A L+F +I +P+L +N +I GF+ + ++ LF ++L + + T
Sbjct: 255 SKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGE-RVSSSTI 313
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
L ++ G +HG VK G+ ++ V T
Sbjct: 314 VGLIPLHSPFGHLHLACSIHGFCVKSGI------------------------ILNPTVST 349
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
F + +N K EID +R LFD+ + V+WN+MISGY +N + A+ LF+E
Sbjct: 350 AFTAI-YN-------KLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKE 401
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + P+ T+ ++L+ACA+LG++ G+W+H+ + + E N V TA++DMY KCG
Sbjct: 402 MMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGN 461
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A Q+F+++ +K WN+M+FG ++GY +EA+KL++ + P ++F++VL A
Sbjct: 462 ISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYA 521
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C+H+G V + ++ F M Y+I+P I+HY+CMVD LGR+G LE+A + I+ MP +P
Sbjct: 522 CSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPA 581
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+WG+LL AC H + ++A+ A++++ ELD YVL+SN+Y+ F +A R ++K
Sbjct: 582 VWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVK 641
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ K+ K PGC+LIEV+G H FV+G R H A ++Y L L ++EMG
Sbjct: 642 KRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMG 691
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 212/484 (43%), Gaps = 86/484 (17%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDIN---YAYLVFTQIKKPNLFIWNTIIR 60
L + HA I G D +++ T D + +A +F + KP++F++N ++R
Sbjct: 28 LAQTHAQFILNGYRFDLATLTKL----TQKLFDFSATRHARALFFSVPKPDIFLFNVLVR 83
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG--AQLHGRVVKQG 118
GFS + +P ++I L+ + + + P TY A+A + D LH + G
Sbjct: 84 GFSLNDSPSSSISLYTHLRRNTNLSPDNFTY-----AFAVAACSNDKHLMLLHAHSIIDG 138
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ F+ + ++ +Y C F +R+++ +R++F
Sbjct: 139 YGSNVFVGSALVDLY--CKF---SRVVY---------------------------ARKVF 166
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D M R+TV WN+MI+G V+N F ++++LFREM ++ T+ ++L A A+L ++
Sbjct: 167 DGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELK 226
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G I + F V+T +I +Y KCG A +F + + L +N+M+ G
Sbjct: 227 VGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFT 286
Query: 299 MNGYENEAIK-----LFSGLQSSN-----LKPDYISFIAVLTACNHSG------------ 336
NG ++K LFSG + S+ L P + F + AC+ G
Sbjct: 287 ANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPT 346
Query: 337 ----------KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
K+N+ L E+ + ++ ++ M+ + G E A L + M
Sbjct: 347 VSTAFTAIYNKLNEIDLARHLFDES--PEKTVVAWNAMISGYTQNGSTETAISLFKEMMK 404
Query: 387 ---DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYV--LMSNLYAASYQFE 441
P+A+ ++LSAC + G++ K +I+ + E YV + ++YA
Sbjct: 405 TEFTPNAVTITTILSACAQLGSLSFGKW-VHHLIKSENLEPNIYVSTALVDMYAKCGNIS 463
Query: 442 EAME 445
EA +
Sbjct: 464 EAWQ 467
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 38/291 (13%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH +K+G+ +P ++ A + +I+ A +F + + + WN +I G++Q+
Sbjct: 332 IHGFCVKSGIILNPTVSTAFTAI-YNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNG 390
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
+ AI LF +M+ T P +T ++ A AQLG G +H + + LE + ++
Sbjct: 391 STETAISLFKEMMKTE-FTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVS 449
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
++ MYA KCG I E+ +LFD M +NT
Sbjct: 450 TALVDMYA--------------------------------KCGNISEAWQLFDSMSEKNT 477
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
V+WN+MI GY + EAL+L+ EM PS T +S+L AC+ G + +GE I +
Sbjct: 478 VTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHN 537
Query: 247 LVTNCFELNTIV--VTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMV 294
+V N + + ++ ++D+ + G E+AL+ +P + G + W +++
Sbjct: 538 MV-NKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLL 587
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/488 (33%), Positives = 279/488 (57%), Gaps = 3/488 (0%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H K DP + + S G INYA VF ++ ++ WNT+I + +
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYAS-CGRINYARNVFDEMSHRDVVTWNTMIERYCRF 190
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
A LF +M S + P + ++ A + G R ++ +++ + D +
Sbjct: 191 GLVDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL 249
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
++ MYA G + AR F ++ ++ +M+ G +KCG +D+++ +FD+ ++
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 308
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
V W +MIS YV + +EAL +F EM IKP +M S+++ACA LG + + +W+H+
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHS 368
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+ N E + A+I+MY KCG + VF +P++ + W+SM+ L+M+G ++
Sbjct: 369 CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASD 428
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+ LF+ ++ N++P+ ++F+ VL C+HSG V + K F MT+ Y I P ++HY CMV
Sbjct: 429 ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMV 488
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D GRA LL EA ++I SMP + +IWGSL+SACR HG +E+ K AAK+I+EL+ +
Sbjct: 489 DLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDG 548
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
VLMSN+YA ++E+ R +M+E + KE G S I+ +G+ HEF+ G + H ++ E
Sbjct: 549 ALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNE 608
Query: 486 VYLLLNDL 493
+Y L+++
Sbjct: 609 IYAKLDEV 616
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 204/436 (46%), Gaps = 68/436 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKP-NLFIWNTII 59
+ +K++HAH+++T + + + +S + +++YA VF+ I P ++N +
Sbjct: 25 LNHIKQLHAHILRT-VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFL 83
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R S+SS PR A +LF + + + ++ + KA +++ +G +LHG K
Sbjct: 84 RDLSRSSEPR-ATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F+ + MYA+CG ++ AR +FDE+ + DVV WN+MI + G +DE
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEM-SHRDVVTWNTMIERYCRFGLVDE------ 195
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
A +LF EM++ N+ P E + ++++AC + G +R
Sbjct: 196 -------------------------AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRY 230
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQ---------------------- 277
I+ FL+ N ++T ++TA++ MY GC + A +
Sbjct: 231 NRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSK 290
Query: 278 ---------VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
+F+ KK L CW +M+ + Y EA+++F + S +KPD +S +V
Sbjct: 291 CGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSV 350
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
++AC + G +++AK + ++ + + +++ + G L+ + MP
Sbjct: 351 ISACANLGILDKAK-WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR-R 408
Query: 389 DAIIWGSLLSACRKHG 404
+ + W S+++A HG
Sbjct: 409 NVVSWSSMINALSMHG 424
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 14/282 (4%)
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
++ +N + R+ + + + ++ ++ + +F+ + +L A +K+ A+ +G +H
Sbjct: 76 SIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+ V T +DMY CG A VF+ + + + WN+M+ G +E
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A KLF ++ SN+ PD + +++AC +G + + + + E ++ + +V
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN-DVRMDTHLLTALV 254
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
AG ++ A + R M S + + +++S K G ++ A+ Q +K +
Sbjct: 255 TMYAGAGCMDMAREFFRKM-SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQT---EKKDLV 310
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
+ M + Y S +EA+ ++ +E CS I+ D
Sbjct: 311 CWTTMISAYVESDYPQEAL---------RVFEEMCCSGIKPD 343
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/497 (36%), Positives = 281/497 (56%), Gaps = 9/497 (1%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H H+++ G D + +L F GD+ AY VF + + +NT+I GF++
Sbjct: 139 QVHCHVLRNGFGSDVFVNNALLNFYCG-FGDVVNAYKVFDESFVRDCVSFNTMINGFARK 197
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF--DQ 123
+F +M ++P T+ +L + L R G Q+HG V ++ F +
Sbjct: 198 GDVSGCFRVFGEMRGVC-VRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNV 256
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVA-WNSMIIGLAKCGEIDESRRLFDKMV 182
+ N ++ MYA CG L A + V VVA W S++ A GE+ +RRLFD+M
Sbjct: 257 LLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMG 316
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ VSW +MISGY F+EALELF +++ +KP E +V+ L+ACA+LGA+ G
Sbjct: 317 ERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRR 376
Query: 243 IHNFLVTNCF--ELNTIVVTAIIDMYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGLA 298
IH + +N +A++DMY KCG + AL VF KK +NS++ GLA
Sbjct: 377 IHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLA 436
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G A LF + LKPD I+F+AVL+AC H G V+ K F M Y + P +
Sbjct: 437 HHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEM 496
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD LGRAG L+EA +LI MP +A+IW +LLSAC+ HG++ +A+ A+ +++E
Sbjct: 497 EHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYELVE 556
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L + GYV++SN+ + + Q +EA R + V I+K PG S +E++ +H+F+AG +
Sbjct: 557 LQHDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNRSLHKFLAGDK 616
Query: 479 LHPKAPEVYLLLNDLGL 495
HP+A L+L D+ +
Sbjct: 617 SHPEAKTTELMLRDINI 633
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 206/453 (45%), Gaps = 75/453 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAF--CTSPAGDINYAYLVFTQIKKPNLFIWNTI 58
M+ +I+AH+I TG + ++ + F +S + +++++ +FTQI P++F+WN I
Sbjct: 27 MQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQITNPDIFLWNAI 86
Query: 59 IRGFSQ-SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLA--RDGAQLHGRVV 115
I+ +SQ S P++ LF ML S + P T+P L KA A + ++ + G Q+H V+
Sbjct: 87 IKAYSQIHSPPQHPFSLFKTML-NSSVLPDSFTFPFLLKACANVLISAPQFGFQVHCHVL 145
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
+ G D F++N ++ Y G + A +FDE D V++N+MI G A+ G++
Sbjct: 146 RNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVR-DCVSFNTMINGFARKGDVSGCF 204
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
R+F EM+ ++P E+T V+LL+ C+ L
Sbjct: 205 RVFG-------------------------------EMRGVCVRPDEYTFVALLSGCSVLE 233
Query: 236 AIRQGEWIHNFLVT--NCFELNTIVVTAIIDMYCKCG---CPERALQV------------ 278
R G +H + CF N ++V ++DMY KCG E L V
Sbjct: 234 DYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWT 293
Query: 279 ------------------FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
F+ + ++ + W +M+ G + G EA++LF L+ +KP
Sbjct: 294 SLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKP 353
Query: 321 DYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
D ++ +A L+AC G + + + E + + S +VD + G ++ A
Sbjct: 354 DEVAVVAALSACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALD 413
Query: 380 LIRSMPSDPD-AIIWGSLLSACRKHGNIEMAKQ 411
+ R D ++ S++S HG E AK
Sbjct: 414 VFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKN 446
>gi|115447355|ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47847799|dbj|BAD21575.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536988|dbj|BAF09371.1| Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 294/506 (58%), Gaps = 12/506 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++HAH + TG A +L F + + YA +F PN+F+++ ++
Sbjct: 23 LAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLSCLPYARRLFDATPSPNVFLYSAMLS 82
Query: 61 GFSQSST-----PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG--LARDGAQLHGR 113
++ +S+ R+++ LF+ ML P + YP + +A +G L R +H
Sbjct: 83 AYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAACAIGVQLVR---SIHCH 139
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
K G FI +++ Y+ G + +AR +FD + T+ +VV+W +++ G A+ G++ +
Sbjct: 140 ACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGL-TDRNVVSWTALVSGYARAGKVGD 198
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+ LF++M R+ +WN++I+G +N F EA+ +FR M ++ +P+ T+ LL+AC
Sbjct: 199 AIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEGFRPNGTTVSCLLSACGH 258
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LG ++ G+ IH + +C + VV +IDMY KCG A +F+ +GL+ WNS+
Sbjct: 259 LGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKWIFDAFSDRGLTTWNSL 318
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ LA++G AI +F+ +++ ++PD ++F+ +L AC H G V++ YF LM + +
Sbjct: 319 INCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFVDEGLRYFELMCDEHG 378
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
I+P I+HY C+VD L RAG ++A I M PD +IWGSLL+ACR H ++E+A+ A
Sbjct: 379 IEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLNACRIHRHLELAEHAI 438
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE-VKIEKEPGCSLIEVDGEVHE 472
+ +++L+ + + V+++NLY+ +EE + R LMKE V +K PGCS IEVD +
Sbjct: 439 RNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVDRKTRR 498
Query: 473 FVAGGRLHPKAPEVYLLLNDLGLLIQ 498
F +G HP++ ++Y L+ L ++
Sbjct: 499 FYSGDDGHPESEDIYDTLDKLATTME 524
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 260/447 (58%), Gaps = 6/447 (1%)
Query: 44 FTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL-- 101
Q N W + I +++ A F DM + ++P +T+ ++
Sbjct: 28 LNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAG-VEPNHITFIAILSGCGDFPS 86
Query: 102 GLARDGAQLHGRVVKQGLEFDQFIHNT-IIYMYANCGFLSEARLMFDEVDTEFDVVAWNS 160
G G LHG K GL+ + + T II MY+ G + +AR +FD ++ + + V WN+
Sbjct: 87 GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDK-NSVTWNT 145
Query: 161 MIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS 220
MI G + G++D + ++FDKM R+ +SW +MI+G+V +EAL FREMQ +KP
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPD 205
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
+++ LNAC LGA+ G W+H ++++ F+ N V ++ID+YC+CGC E A QVF+
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFD 265
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
+ K+ + WNS++ G A NG +E++ F +Q KPD ++F LTAC+H G V +
Sbjct: 266 KMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEE 325
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSAC 400
YF +M Y+I P I+HY C+VD RAG LE+A KL++SMP P+ ++ GSLL+AC
Sbjct: 326 GLRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAAC 385
Query: 401 RKHG-NIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP 459
R HG N +A++ K + +L+ YV++SN+YAA ++E A + R MK + ++K+P
Sbjct: 386 RNHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 445
Query: 460 GCSLIEVDGEVHEFVAGGRLHPKAPEV 486
G S IE+D H F+AG H + +
Sbjct: 446 GFSSIEIDDCTHVFMAGDSAHVETTNI 472
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 36/254 (14%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
+G ++ A +F ++ + +L W +I GF A+ F +M + S ++P + +
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQI-SGVKPDYVAIIA 211
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
A LG G +H V+ Q + + + N++I +Y CG + AR +FD+++
Sbjct: 212 ALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKR- 270
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
VV+WNS+I+G A G ES L FR+MQ
Sbjct: 271 TVVSWNSVIVGFAANGNAHES-------------------------------LVYFRKMQ 299
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGC 271
E+ KP T L AC+ +G + +G ++++ + ++ + ++D+Y + G
Sbjct: 300 EERFKPDAVTFTGALTACSHVGLVEEGLRYFQIMISD-YRISPRIEHYGCLVDLYSRAGR 358
Query: 272 PERALQVFNTVPKK 285
E AL++ ++P K
Sbjct: 359 LEDALKLVQSMPMK 372
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 12/174 (6%)
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+Q N + W S + L NG EA K FS ++ + ++P++I+FIA+L+ C
Sbjct: 25 IQRLNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGC--- 81
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA-----LGRAGLLEEAEKLIRSMPSDPDA 390
G + + Y K + MV + G +++A + M D ++
Sbjct: 82 GDFPSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYM-EDKNS 140
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
+ W +++ + G ++ AAK ++ + + + M N + EEA+
Sbjct: 141 VTWNTMIDGYMRSGQVD---NAAKMFDKMPERDLISWTAMINGFVNKGFHEEAL 191
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 21 IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLV 80
++ S I +C G + +A VF +++K + WN++I GF+ + +++ F M
Sbjct: 243 VSNSLIDLYCR--CGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQ- 299
Query: 81 TSPIQPQRLTYPSLFKAYAQLGLARDG 107
+P +T+ A + +GL +G
Sbjct: 300 EERFKPDAVTFTGALTACSHVGLVEEG 326
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 307/572 (53%), Gaps = 79/572 (13%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA---FCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
+ + +IHA ++K L +D A +++A C A +N VF + PN+ ++N+
Sbjct: 34 LDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVN----VFNHVPHPNVHLYNS 89
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA---QLGLARDGAQLHGRV 114
IIR + +S+ R+ + + + P TYP L KA + L L R +H V
Sbjct: 90 IIRAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVR---MIHAHV 146
Query: 115 VKQGLEFDQFIHNTIIYMYANCG----------FLS-EAR-------------------- 143
K G D F+ N++I Y+ CG FL+ E R
Sbjct: 147 EKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQG 206
Query: 144 --LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY----- 196
+FDE+ + D+V+WN+M+ G AK GE+D + LF++M RN VSW++M+ GY
Sbjct: 207 ACKLFDEM-PDRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGD 265
Query: 197 ------------VRNVKF--------------KEALELFREMQEQNIKPSEFTMVSLLNA 230
V+NV +EA EL+ +M+E ++P + ++S+L A
Sbjct: 266 MDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAA 325
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN-TVPKKGLSC 289
CA+ G + G+ IH + F V+ A IDMY KCGC + A VF+ + KK +
Sbjct: 326 CAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVS 385
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WNSM+ G AM+G+ +A++LFS + +PD +F+ +L AC H+G VN+ + YF M
Sbjct: 386 WNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRKYFYSME 445
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ Y I P ++HY CM+D LGR G L+EA L+RSMP +P+AII G+LL+ACR H ++++A
Sbjct: 446 KVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMHNDVDLA 505
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGE 469
+ +Q+ +L+ ++ Y L+SN+YA + + RL MK EK G S IEV+ E
Sbjct: 506 RAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEVEEE 565
Query: 470 VHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
VHEF + HPK+ ++Y +++ L ++++G
Sbjct: 566 VHEFTVFDQSHPKSDDIYQMIDRLVQDLRQVG 597
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 299/525 (56%), Gaps = 75/525 (14%)
Query: 2 KDLKKIHAHLIKTGLAKD------------------------PIAASR-ILAFCTSPAGD 36
K+ ++IH H++K G D I++ R ++++ AG
Sbjct: 106 KEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGY 165
Query: 37 INYAYL-----VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
++ Y+ +F +I ++ WN +I G+ ++ + A+ LF +M++ + ++P T
Sbjct: 166 VSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTM 225
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
++ A AQ +E + +H+ I + GF S +++
Sbjct: 226 VTVVSACAQ---------------SDSIELGRHVHSWI----NDHGFASNLKIV------ 260
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
N++I +K GE++ + LFD + +++ +SWN++I GY +KEAL LF+E
Sbjct: 261 -------NALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQE 313
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL-------VTNCFELNTIVVTAIID 264
M P++ TM+S+L ACA LGAI G WIH ++ VTN L T ++ID
Sbjct: 314 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQT----SLID 369
Query: 265 MYCKCGCPERALQVFNT-VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
MY KCG + A QVF++ + + LS WN+M+ G AM+G N A +FS ++ + ++PD I
Sbjct: 370 MYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDI 429
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F+ +L+AC+HSG ++ ++ F MT Y+I P ++HY CM+D LG +GL +EAE++I +
Sbjct: 430 TFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINT 489
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
MP +PD +IW SLL AC+ HGN+E+ + AK++I+++ S YVL+SN+YAA+ ++ E
Sbjct: 490 MPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEV 549
Query: 444 MEERLLMKEVKIEKE-PGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
+ R L+ + ++K+ PGCS IE+D VHEF+ G +LHP+ E+Y
Sbjct: 550 AKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 594
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 243/413 (58%), Gaps = 11/413 (2%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGD-INYAYLVFTQIKKPNLFIWNTIIRG 61
++ IHA +IKTGL A S++L FC SP D YA VF I++PNL IWNT+ RG
Sbjct: 4 VRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRG 63
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ SS P +A+ L++ ++++ + P T+P L K+ A+ + ++G Q+HG V+K G +
Sbjct: 64 HALSSDPVSALKLYL-VMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDL 122
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D ++H ++I MYA G L +AR +FD + + DVV++ ++I G G I+ +++LFD++
Sbjct: 123 DIYVHTSLISMYAQNGRLEDARKVFD-ISSHRDVVSYTALIAGYVSRGYIESAQKLFDEI 181
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFRE-MQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
++ VSWN+MISGYV +KEALELF+E M N++P E TMV++++ACA+ +I G
Sbjct: 182 PGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELG 241
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H+++ + F N +V A+ID+Y K G E A ++F+ + K + WN+++ G
Sbjct: 242 RHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHM 301
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
EA+ LF + S P+ ++ +++L AC H G ++ + + + K+K + +
Sbjct: 302 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINK--KLKGVVTN 359
Query: 361 YS----CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
S ++D + G ++ A+++ S S+ W +++S HG A
Sbjct: 360 VSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAA 412
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 282/497 (56%), Gaps = 35/497 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IHAH+IK+GL P+ ++ F + + + VF + ++ + W+++I F+Q
Sbjct: 74 QQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPL-LSSQVFEESERKSSTTWSSVISSFAQ 132
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P AI F M + + P +PS KA A LG G +H V+K G + D F
Sbjct: 133 NEEPVLAIQYFCRM-IGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVF 191
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++++ MYA KCG+I E+R +FD+M R
Sbjct: 192 VGSSLVDMYA--------------------------------KCGDIKEARNVFDEMPHR 219
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSW+ MI GY + + +EA+ LF+E + + ++FT+ S++ C + G+ IH
Sbjct: 220 NVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIH 279
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++L+ V +++I +Y KCG E A +VF+ VP K L WN+M+ A + +
Sbjct: 280 GLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTK 339
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA LF+ ++++ ++P++I+F+ VL AC+H+G V + K YF LM + Y+I+P +HY+ M
Sbjct: 340 EAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALM-KKYEIEPGTQHYASM 398
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L+EA +I+ MP++P +WG+ ++ CR HGN ++A AA ++ EL S
Sbjct: 399 VDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSS 458
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
+V++SN YAA+ ++E+A + R ++++ ++KE G S IE VH+F AG R H +
Sbjct: 459 GLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMK 518
Query: 485 EVYLLLNDLGLLIQEMG 501
E+Y L DLG ++ G
Sbjct: 519 EIYQKLEDLGEEMERAG 535
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 6/203 (2%)
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
+ LL + + ++ +G+ IH ++ + ++ +V +I+ Y K P + QVF
Sbjct: 57 ICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESE 116
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
+K + W+S++ A N AI+ F + NL PD F + AC G+ + K
Sbjct: 117 RKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKS 176
Query: 344 YFTLMTET-YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
L+ +T Y + + S +VD + G ++EA + MP + + W ++ +
Sbjct: 177 VHCLVIKTGYDVDVFVG--SSLVDMYAKCGDIKEARNVFDEMPHR-NVVSWSGMIYGYTQ 233
Query: 403 HGNIEMAKQAAKQII--ELDKNE 423
G E A + K+ + LD N+
Sbjct: 234 LGEHEEAMRLFKEALLEGLDVND 256
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 286/498 (57%), Gaps = 35/498 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+H +++ GL +P + ++ + GDI+ A ++F ++ + N+ W +I G++Q
Sbjct: 168 QKVHMEIVEAGLELEPRVGTSLVGM-YAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQ 226
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ L ++ + + + P ++T+ S+ + G ++H +++ G + +
Sbjct: 227 QGQVDVALEL-LETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELW 285
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I MY KCG ++E+R+LF + R
Sbjct: 286 VVNSLITMYC--------------------------------KCGGLEEARKLFSDLPHR 313
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V+W +M++GY + EA+ LFR MQ+Q IKP + T S+L +C+ +++G+ IH
Sbjct: 314 DVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIH 373
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL-AMNGYE 303
LV + L+ + +A++ MY KCG + A VFN + ++ + W +++ G A +G
Sbjct: 374 QQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRC 433
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA++ F ++ +KPD ++F +VL+AC H G V + + +F M Y IKP ++HYSC
Sbjct: 434 REALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSC 493
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
VD LGRAG LEEAE +I SMP P +WG+LLSACR H ++E ++AA+ +++LD ++
Sbjct: 494 FVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDD 553
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
YV +S++YAA+ ++E+A + R +M++ + KEPG S IEVDG+VH F + HP++
Sbjct: 554 DGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPES 613
Query: 484 PEVYLLLNDLGLLIQEMG 501
++Y+ L L I+EMG
Sbjct: 614 EQIYVELGKLTEQIKEMG 631
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 159/339 (46%), Gaps = 46/339 (13%)
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
+ L + A+L G ++H ++K G++ ++++ NT++ MYA
Sbjct: 50 FRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYA---------------- 93
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
KCG + ++RR+FD + RN VSW +MI +V K EA + +
Sbjct: 94 ----------------KCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYE 137
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
M+ KP + T VSLLNA ++ G+ +H +V EL V T+++ MY KCG
Sbjct: 138 TMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCG 197
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
+A +F+ +P+K + W ++ G A G + A++L +Q + + P+ I+F ++L
Sbjct: 198 DISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQ 257
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL----GRAGLLEEAEKLIRSMPS 386
C + K Y I+ +V++L + G LEEA KL +P
Sbjct: 258 GCTTPAALEHGKK-----VHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPH 312
Query: 387 DPDAIIWGSLLSACRKHG----NIEMAKQAAKQIIELDK 421
D + W ++++ + G I + ++ +Q I+ DK
Sbjct: 313 R-DVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDK 350
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 107/225 (47%), Gaps = 4/225 (1%)
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
T++ + +S + + KEAL + M Q + LL CA+L ++ QG +H
Sbjct: 12 TLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHA 71
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + + N + ++ MY KCG A +VF+++ + + W +M+ E
Sbjct: 72 AILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLE 131
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA-KDYFTLMTETYKIKPSIKHYSCM 364
A K + ++ + KPD ++F+++L A + + K + ++ +++P + + +
Sbjct: 132 AFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSL 189
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
V + G + +A + +P + + + W L++ + G +++A
Sbjct: 190 VGMYAKCGDISKARVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVA 233
>gi|222623259|gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 294/506 (58%), Gaps = 12/506 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++HAH + TG A +L F + + YA +F PN+F+++ ++
Sbjct: 241 LAHLKQLHAHAVVTGRAAAQTTTFHLLRFASLRLSCLPYARRLFDATPSPNVFLYSAMLS 300
Query: 61 GFSQSST-----PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG--LARDGAQLHGR 113
++ +S+ R+++ LF+ ML P + YP + +A +G L R +H
Sbjct: 301 AYAAASSHSQEHARDSLALFLRMLRRGRPAPNQFVYPLVLRAACAIGVQLVR---SIHCH 357
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
K G FI +++ Y+ G + +AR +FD + T+ +VV+W +++ G A+ G++ +
Sbjct: 358 ACKDGFYGHDFIRTSLLDGYSRYGMMGDARKLFDGL-TDRNVVSWTALVSGYARAGKVGD 416
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+ LF++M R+ +WN++I+G +N F EA+ +FR M ++ +P+ T+ LL+AC
Sbjct: 417 AIVLFERMPQRDVPAWNAIIAGCTQNGLFVEAVGIFRRMVDEGFRPNGTTVSCLLSACGH 476
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LG ++ G+ IH + +C + VV +IDMY KCG A +F+ +GL+ WNS+
Sbjct: 477 LGMLKIGKVIHGYAWRSCVGFGSSVVNGLIDMYGKCGNLMEAKWIFDAFSDRGLTTWNSL 536
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ LA++G AI +F+ +++ ++PD ++F+ +L AC H G V++ YF LM + +
Sbjct: 537 INCLALHGCSESAIAVFNSMRNEGVQPDEVTFVGLLNACTHGGFVDEGLRYFELMCDEHG 596
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
I+P I+HY C+VD L RAG ++A I M PD +IWGSLL+ACR H ++E+A+ A
Sbjct: 597 IEPEIEHYGCVVDLLCRAGRFQDAMNFINDMKVQPDEVIWGSLLNACRIHRHLELAEHAI 656
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE-VKIEKEPGCSLIEVDGEVHE 472
+ +++L+ + + V+++NLY+ +EE + R LMKE V +K PGCS IEVD +
Sbjct: 657 RNLLDLNPSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVDRKTRR 716
Query: 473 FVAGGRLHPKAPEVYLLLNDLGLLIQ 498
F +G HP++ ++Y L+ L ++
Sbjct: 717 FYSGDDGHPESEDIYDTLDKLATTME 742
>gi|147860852|emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/390 (40%), Positives = 242/390 (62%), Gaps = 4/390 (1%)
Query: 105 RDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT-EFDVVAWNSMII 163
R Q H +++K G + +++ YA+C L A + DE+ FD++ N +I
Sbjct: 76 RTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIA 135
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFT 223
L K GE D ++R+F KM+ R+ V+WNSMI G VRN +F+EAL FREM N++P FT
Sbjct: 136 SLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFT 195
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
S++N CA+LG+ E +H ++ +LN I+ +A+ID+Y KCG A +VFN++
Sbjct: 196 FASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQ 255
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
+S WNSM+ GLA++G +AI +FS ++ ++ PD I+FI +LTAC+H G V Q +
Sbjct: 256 HDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRR 315
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
YF LM Y I+P ++HY MVD LGRAGL+EEA +I++MP +PD +IW +LLSACR
Sbjct: 316 YFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNF 375
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
N E+ + A +I L+ + Y+L+SN+Y + +++ A R +MK + K G S
Sbjct: 376 KNPELGEVAIAKISHLNSGD---YILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSW 432
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+E+ G +H+F AG R HP+ +Y +L L
Sbjct: 433 VELGGVIHQFKAGDRSHPETGAIYKVLEGL 462
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 125/266 (46%), Gaps = 35/266 (13%)
Query: 19 DPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM 78
D I A+ I+A G+ ++A VF ++ + ++ WN++I G ++ A+ F +M
Sbjct: 126 DLITANLIIA-SLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREM 184
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
L S ++P T+ S+ A+LG + +HG ++++ ++ + + + +I +Y+ CG
Sbjct: 185 L-NSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGR 243
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
++ A+ +F+ + + DV WNSMI GLA I G
Sbjct: 244 INTAKKVFNSIQHD-DVSVWNSMINGLA--------------------------IHGLA- 275
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN-CFELNTI 257
+A+ +F +M+ +++ P T + +L AC+ G + QG + + + +
Sbjct: 276 ----LDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLE 331
Query: 258 VVTAIIDMYCKCGCPERALQVFNTVP 283
A++D+ + G E A + +P
Sbjct: 332 HYGAMVDLLGRAGLVEEAYAMIKAMP 357
>gi|225456505|ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/390 (40%), Positives = 242/390 (62%), Gaps = 4/390 (1%)
Query: 105 RDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT-EFDVVAWNSMII 163
R Q H +++K G + +++ YA+C L A + DE+ FD++ N +I
Sbjct: 37 RTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIA 96
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFT 223
L K GE D ++R+F KM+ R+ V+WNSMI G VRN +F+EAL FREM N++P FT
Sbjct: 97 SLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFT 156
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
S++N CA+LG+ E +H ++ +LN I+ +A+ID+Y KCG A +VFN++
Sbjct: 157 FASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQ 216
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
+S WNSM+ GLA++G +AI +FS ++ ++ PD I+FI +LTAC+H G V Q +
Sbjct: 217 HDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRR 276
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
YF LM Y I+P ++HY MVD LGRAGL+EEA +I++MP +PD +IW +LLSACR
Sbjct: 277 YFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNF 336
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
N E+ + A +I L+ + Y+L+SN+Y + +++ A R +MK + K G S
Sbjct: 337 KNPELGEVAIAKISHLNSGD---YILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSW 393
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+E+ G +H+F AG R HP+ +Y +L L
Sbjct: 394 VELGGVIHQFKAGDRSHPETGAIYKVLEGL 423
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 125/266 (46%), Gaps = 35/266 (13%)
Query: 19 DPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM 78
D I A+ I+A G+ ++A VF ++ + ++ WN++I G ++ A+ F +M
Sbjct: 87 DLITANLIIA-SLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREM 145
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
L S ++P T+ S+ A+LG + +HG ++++ ++ + + + +I +Y+ CG
Sbjct: 146 L-NSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGR 204
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
++ A+ +F+ + + DV WNSMI GLA I G
Sbjct: 205 INTAKKVFNSIQHD-DVSVWNSMINGLA--------------------------IHGLA- 236
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN-CFELNTI 257
+A+ +F +M+ +++ P T + +L AC+ G + QG + + + +
Sbjct: 237 ----LDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLE 292
Query: 258 VVTAIIDMYCKCGCPERALQVFNTVP 283
A++D+ + G E A + +P
Sbjct: 293 HYGAMVDLLGRAGLVEEAYAMIKAMP 318
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/421 (39%), Positives = 254/421 (60%), Gaps = 20/421 (4%)
Query: 84 IQPQRLTYPSLFKAYAQLGLA--RDGAQLHGRVVKQGLEFDQFIHNT-IIYMYANCGFLS 140
++P +T+ +L A L R G +H V K GL+ + + T ++ MY+ CG L
Sbjct: 85 VRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLD 144
Query: 141 EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNV 200
A LMFDE+ + V+WN+MI G + GE+ E+ LFD+M R+ +SW SMI G+V+
Sbjct: 145 LAWLMFDEMHVR-NSVSWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKG 203
Query: 201 KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
F++ALE FREMQ ++P T++S+L ACA LGA+ G WI+ F++ F+ N +
Sbjct: 204 CFEQALEWFREMQLAGVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISN 263
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
++IDMY +CGC A QVF +PK+ L WNSM+ G A+NG+ EA++ F+ ++
Sbjct: 264 SLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKE---- 319
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
HSG V++ +F +M T KI P I+HY C+VD RAG LE+A +
Sbjct: 320 ------------GHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNV 367
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQF 440
I +MP P+ ++ GSLL+ACR HG++ +A++ K + E+D YVL+SN+YAA ++
Sbjct: 368 IANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRW 427
Query: 441 EEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEM 500
+ A + R MK + I K+PG S IE+DG +HEFVAG + H + +Y +L+ L L ++
Sbjct: 428 DGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGDKTHVETQNIYAMLDHLFLELRIC 487
Query: 501 G 501
G
Sbjct: 488 G 488
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 36/257 (14%)
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK--LGAIRQGEWIH 244
VSW S I+ + RN + EA F MQ ++P+ T ++LL+AC L +R G IH
Sbjct: 55 VSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIH 114
Query: 245 NFLVTNCFEL-NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
++ + N +V TA++DMY KCG + A +F+ + + WN+M+ G NG
Sbjct: 115 AYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEV 174
Query: 304 NEAIKLFSG-------------------------------LQSSNLKPDYISFIAVLTAC 332
EAI LF +Q + ++PDY++ I+VL AC
Sbjct: 175 GEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAAC 234
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+ G + + K +IK + ++D R G + A ++ MP +
Sbjct: 235 ANLGALGLGL-WINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKR-SLVS 292
Query: 393 WGSLLSACRKHGNIEMA 409
W S++ +G+ E A
Sbjct: 293 WNSMIVGFALNGHAEEA 309
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 127/295 (43%), Gaps = 58/295 (19%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA++ K GL + + L S G ++ A+L+F ++ N WNT+I G ++
Sbjct: 113 IHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNG 172
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
AI+LF M + + ++P +T S+
Sbjct: 173 EVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLA 232
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A LG G ++ V+KQ + + I N++I MY+ CG + AR +F+++ +V
Sbjct: 233 ACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKR-SLV 291
Query: 157 AWNSMIIGLA-------------------KCGEIDESRRLFDKMVSRNTVS-----WNSM 192
+WNSMI+G A G +DE + FD M +S + +
Sbjct: 292 SWNSMIVGFALNGHAEEALEFFNLMRKEGHSGLVDEGLQFFDIMKRTRKISPRIEHYGCL 351
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
+ Y R + ++AL + M +KP+E + SLL AC G + E + +L
Sbjct: 352 VDLYSRAGRLEDALNVIANMP---MKPNEVVLGSLLAACRTHGDVGLAERLMKYL 403
>gi|356507694|ref|XP_003522599.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 535
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/512 (35%), Positives = 292/512 (57%), Gaps = 47/512 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKD-PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +LK++ A + K GL P A I SP G++++A+ +F Q N FI NT+I
Sbjct: 18 MLELKQVQAIITKAGLHSHLPFTAKLIFFSALSPMGNLSHAHSLFLQTSMHNSFICNTMI 77
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA------YAQLGLARD------- 106
R F+ SS P A+ ++ M T+ + TY + KA +AQ + D
Sbjct: 78 RAFANSSYPLQALYIYNHMHTTNVVSDH-FTYNFVLKACSRAHKFAQEFVKCDEFIIISK 136
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD-----------TEFD- 154
G ++H V+K GL+ D I N+++ MY+ CG + A+ +FDE+ + +D
Sbjct: 137 GGEVHCTVLKLGLDQDPSIQNSLLCMYSQCGLVHVAQHLFDEISNRSLVSWNIMISAYDR 196
Query: 155 ------------------VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY 196
VV+WN++I + G+I+ +RR+F M R+ VSWNS+I+G
Sbjct: 197 VNDSKSADYLLESMPHKNVVSWNTVIGRYIRLGDIEGARRVFQIMPQRDAVSWNSLIAGC 256
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
V ++ A+ LF EMQ ++P+E T++S+L ACA+ GA+ G IH L ++
Sbjct: 257 VSVKDYEGAMGLFSEMQNAEVRPTEVTLISVLGACAETGALEMGSKIHESLKACGHKIEG 316
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
+ A+++MY KCG A +VFN + K LSCWN+M+ GLA++GY EA++LFS ++S
Sbjct: 317 YLGNALLNMYSKCGKLNSAWEVFNGMRIKTLSCWNAMIVGLAVHGYCEEALQLFSEMESG 376
Query: 317 --NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
++P+ ++F+ VL AC+H G V++A+ F M + YKI P IKHY C+VD L R GLL
Sbjct: 377 LDTVRPNRVTFLGVLIACSHKGLVDKARWNFDHMAKQYKILPDIKHYGCIVDLLSRFGLL 436
Query: 375 EEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLY 434
EEA ++I++ P AI+W +LL ACR GN+E+AK + +Q+ +L + YVL+SN+Y
Sbjct: 437 EEAHQMIKTAPLQNSAILWRTLLGACRTQGNVELAKVSFQQLAKLGRLTDGDYVLLSNIY 496
Query: 435 AASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
A + +++E R M + + K+ S I++
Sbjct: 497 AEAERWDEVERVRSEMIGLHVPKQVAYSQIDM 528
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/502 (35%), Positives = 279/502 (55%), Gaps = 43/502 (8%)
Query: 1 MKDLKKIHAHLIKTGLAK---DP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWN 56
M + +I A LI + + DP + A +++ C A ++ A L+F + PN+F N
Sbjct: 1 MAQVLQIQAQLITSPIPSSVVDPNLIAVKLIGACADHA-NVRQAALIFAHLASPNIFAHN 59
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSP--IQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
++ +Q+S +AI F + V+SP P T+ S+ KA A L +G ++H V
Sbjct: 60 ATLKALAQNSHWFHAIQFF-NHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMV 118
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
KQG E + F+ N++I MY G+L AR
Sbjct: 119 TKQGFESNLFVRNSLIDMYFKAGYLLLAR------------------------------- 147
Query: 175 RRLFDKMV--SRNTVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNAC 231
LFD+M RN V WN+MI+GY +N K+ +A+E+FR MQ+ + P++ T+VS+L AC
Sbjct: 148 -HLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFGGVVPNDVTLVSVLPAC 206
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A LGA+ G+WI F+ L + A+ DMY KCGC A +VFN + ++ + W+
Sbjct: 207 AHLGALDLGKWIDGFISRREMALGLFLGNALADMYAKCGCITEARRVFNKMEERDVISWS 266
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
++ GLAM G+ +EA F + KP+ + F+ +LTAC H+G V + + F M +
Sbjct: 267 IIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACTHAGLVKKGLNCFNTMDKE 326
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
Y + P ++HY C+VD L RAG L++AE +I SMP P+ IIWG+LL CR + + ++
Sbjct: 327 YGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIWGALLGGCRIYRDSGRGQR 386
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
+ I+ELD + S YV ++N+Y++ + ++A + RL M+E + K PGCS IEVD VH
Sbjct: 387 VVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMRENGVLKTPGCSWIEVDNTVH 446
Query: 472 EFVAGGRLHPKAPEVYLLLNDL 493
EF G HP++ ++Y ++ +L
Sbjct: 447 EFFMGDLSHPESNKIYSMIREL 468
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/461 (36%), Positives = 272/461 (59%), Gaps = 3/461 (0%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA ++K G + + S L G + A VF ++ + +L WN+++ G+ Q
Sbjct: 99 IHARVLKLGF-ESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCK 157
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
R + +F M V ++ +T + A LG + + + +E D ++
Sbjct: 158 RFREVLGVFEAMRVAG-VKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLG 216
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
NT+I MY G + AR +FD++ ++V+WN+MI+G K G + +R LFD M R+
Sbjct: 217 NTLIDMYGRRGLVHLARGVFDQMQWR-NLVSWNAMIMGYGKAGNLVAARELFDAMSQRDV 275
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
+SW +MI+ Y + +F EAL LF+EM E +KP E T+ S+L+ACA G++ GE H++
Sbjct: 276 ISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDY 335
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ + + V A+IDMYCKCG E+AL+VF + KK W S++ GLA+NG+ + A
Sbjct: 336 IQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVNGFADSA 395
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+ FS + ++P + +F+ +L AC H+G V++ +YF M + Y +KP +KHY C+VD
Sbjct: 396 LDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVD 455
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
L R+G L+ A + I+ MP PD +IW LLSA + HGNI +A+ A K+++ELD + S
Sbjct: 456 LLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAEIATKKLLELDPSNSGN 515
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
YVL SN YA S ++E+A++ R LM++ ++K G S IE++
Sbjct: 516 YVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSSCIEME 556
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 203/429 (47%), Gaps = 74/429 (17%)
Query: 11 LIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPR 69
++ L DP ++ ++ SP+ I A+ +F QI +P L WN +IRG+S S P
Sbjct: 1 MVNPNLRTDPSTIYNLIKSYALSPS-TILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPN 59
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
AI ++ +++ + LTY LFKA A++ G+ +H RV+K G E ++ N +
Sbjct: 60 EAIRMY-NLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNAL 118
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 189
I MY +CG L A+ +FDE+ E D+V+WNS++ G +C
Sbjct: 119 INMYGSCGHLGLAQKVFDEM-PERDLVSWNSLVCGYGQCK-------------------- 157
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
+F+E L +F M+ +K TMV ++ AC LG + + +++
Sbjct: 158 -----------RFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEE 206
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL------------ 297
N E++ + +IDMY + G A VF+ + + L WN+M+ G
Sbjct: 207 NNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAAREL 266
Query: 298 --AMN-----------------GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
AM+ G EA++LF + S +KPD I+ +VL+AC H+G +
Sbjct: 267 FDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSL 326
Query: 339 N---QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
+ A DY + Y +K I + ++D + G++E+A ++ + M D++ W S
Sbjct: 327 DVGEAAHDYI----QKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEM-RKKDSVSWTS 381
Query: 396 LLSACRKHG 404
++S +G
Sbjct: 382 IISGLAVNG 390
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 7/289 (2%)
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
I ++ LF ++ WN MI G+ + + EA+ ++ M Q + + T + L A
Sbjct: 27 ILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLFKA 86
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA++ + G IH ++ FE + V A+I+MY CG A +VF+ +P++ L W
Sbjct: 87 CARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSW 146
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
NS+V G E + +F ++ + +K D ++ + V+ AC G+ A D E
Sbjct: 147 NSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVA-DAMVDYIE 205
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
++ + + ++D GR GL+ A + M + + W +++ K GN+
Sbjct: 206 ENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWR-NLVSWNAMIMGYGKAGNL---- 260
Query: 411 QAAKQIIE-LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
AA+++ + + + + + M Y+ + QF EA+ M E K++ +
Sbjct: 261 VAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPD 309
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/441 (37%), Positives = 253/441 (57%), Gaps = 6/441 (1%)
Query: 44 FTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGL 103
Q + W + I S+ A+ F DM + I+P +T+ +L A
Sbjct: 13 LNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAG-IEPNHITFIALLSACGNFPS 71
Query: 104 ARDGAQ--LHGRVVKQGLEFDQFIHNT-IIYMYANCGFLSEARLMFDEVDTEFDVVAWNS 160
+G LHG K GLE + T I+ MY+ G L +ARL+FD ++ + + V WN+
Sbjct: 72 GSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDK-NSVTWNT 130
Query: 161 MIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS 220
MI G + G++D + +FDKM R+ +SW +MI+G+V+ +EAL FREMQ + P
Sbjct: 131 MIDGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPD 190
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
++S + AC LGA+ G W+H ++++ F N V ++ID+YC+CGC E A QVF+
Sbjct: 191 YVAIISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFD 250
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
+ K+ + WNS++ G A NG NE++ F +Q PD ++F LTAC+H G V +
Sbjct: 251 KMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEE 310
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSAC 400
YF +M Y+I P I+HY C+VD RAG LE+A ++ SMP P+ ++ GSLL+AC
Sbjct: 311 GFQYFQMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAAC 370
Query: 401 RKHGNIE-MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP 459
R HGN +A++ K I +LD YV++SN+YAA ++E A + R MK + ++K+P
Sbjct: 371 RNHGNHTILAERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQP 430
Query: 460 GCSLIEVDGEVHEFVAGGRLH 480
G S IE+D H F+AG H
Sbjct: 431 GYSSIEIDDCTHVFMAGDSAH 451
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 122/314 (38%), Gaps = 71/314 (22%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL + + + S +G + A LVF I+ N WNT+I G+ ++
Sbjct: 80 LHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNG 139
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
NA+ +F M + S + P + S
Sbjct: 140 QVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVA 199
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A LG G +H V+ Q + + N++I +Y CG + AR +FD+++ VV
Sbjct: 200 ACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKR-TVV 258
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G +ES L FR+MQ +
Sbjct: 259 SWNSVIVGFAANGNANES-------------------------------LVYFRKMQREG 287
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWI-----HNFLVTNCFELNTIVVTAIIDMYCKCGC 271
P T L AC+ +G + +G H++ ++ E ++D+Y + G
Sbjct: 288 FTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEH----YGCLVDLYSRAGR 343
Query: 272 PERALQVFNTVPKK 285
E A V ++P K
Sbjct: 344 LEDAFIVVESMPMK 357
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+Q N + + W S + L+ +G EA++ FS ++ + ++P++I+FIA+L+AC
Sbjct: 10 IQKLNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSAC--- 66
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA--LG---RAGLLEEAEKLIRSMPSDPDA 390
G + + Y K ++ MV LG ++G L +A +L+ D ++
Sbjct: 67 GNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKA-RLVFDYIEDKNS 125
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ W +++ ++G ++ A ++ + D
Sbjct: 126 VTWNTMIDGYMRNGQVDNAVDVFDKMPDRD 155
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 296/566 (52%), Gaps = 71/566 (12%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+KIH ++K GL D +A+ ++ S AG+I A VF I P++ WN II G
Sbjct: 203 RKIHGLMLKMGLDLDQFSANALVDM-YSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVL 261
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A++L +D + S +P T S KA A +G G QLH ++K D F
Sbjct: 262 HDCNDLALML-LDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLF 320
Query: 125 IH-------------------------------NTIIYMYANCGFLSEARLMFDEV---D 150
N +I Y+ CG +A +F ++ D
Sbjct: 321 AAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSED 380
Query: 151 TEF-----------------------------------DVVAWNSMIIGLAKCGEIDESR 175
+F D NS++ KC IDE+
Sbjct: 381 IDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEAS 440
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
++F++ + V++ SMI+ Y + +EAL+L+ +MQ+ +IKP F SLLNACA L
Sbjct: 441 KIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLS 500
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A QG+ +H + F + ++++MY KCG E A + F+ +P +G+ W++M+
Sbjct: 501 AYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIG 560
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
G A +G+ EA++LF+ + + P++I+ ++VL ACNH+G VN+ K YF M + IK
Sbjct: 561 GYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIK 620
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P+ +HY+CM+D LGR+G L EA +L+ S+P + D +WG+LL A R H NIE+ ++AAK
Sbjct: 621 PTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKM 680
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+ +L+ +S +VL++N+YA++ +E + R MK+ K++KEPG S IE+ +V+ F+
Sbjct: 681 LFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIV 740
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQEMG 501
G R H ++ E+Y L+ LG L+ + G
Sbjct: 741 GDRSHSRSDEIYAKLDQLGDLLSKAG 766
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 197/405 (48%), Gaps = 46/405 (11%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++HAHLIK G ++DP + ++ S YA + + + ++ W++++ G+ Q+
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTL-YSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD---GAQLHGRVVKQGLEFD 122
A+L+F +M + ++ T+PS+ KA + + RD G ++HG V G E D
Sbjct: 61 GFVEEALLVFNEMCLLG-VKCNEFTFPSVLKACS---MKRDLNMGRKVHGMAVVTGFESD 116
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ NT++ MYA KCG +D+SRRLF +V
Sbjct: 117 GFVANTLVVMYA--------------------------------KCGLLDDSRRLFGGIV 144
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
RN VSWN++ S YV++ EA+ LF+EM I P+EF++ +LNACA L G
Sbjct: 145 ERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRK 204
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH ++ +L+ A++DMY K G E A+ VF + + WN+++ G ++
Sbjct: 205 IHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDC 264
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+ A+ L ++ S +P+ + + L AC G + L + K+ ++
Sbjct: 265 NDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGR---QLHSSLIKMDAHSDLFA 321
Query: 363 C--MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+VD + ++++A + SMP D I W +L+S + G+
Sbjct: 322 AVGLVDMYSKCEMMDDARRAYDSMPK-KDIIAWNALISGYSQCGD 365
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 177/473 (37%), Positives = 276/473 (58%), Gaps = 35/473 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK+IHA + TG + I + +I+ FC + + ++NYA VF +I KP+ F+WNT+IR
Sbjct: 25 LNHLKQIHARIFLTGFNHNLILSGKIIMFC-AVSQNMNYALNVFDKIPKPDSFLWNTMIR 83
Query: 61 GFSQSST-PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
GF S+T NAI F M + +P T+ + K A+L G QLH + K G
Sbjct: 84 GFGNSTTHSHNAIHFFKRMQLAH--RPDNFTFSFILKIIARLRFVNLGKQLHCSLFKFGF 141
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E ++ N++I+MY + A +F+E+ + ++V+WNS+I CG+ +E+ LF
Sbjct: 142 ENHTYVRNSLIHMYGMLKDIEIAHQLFEEM-YQPNLVSWNSIIDCHVYCGKYNEAIDLFT 200
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
KMV + +EL +P T+V L+AC +G++
Sbjct: 201 KMVQQQ-----------------HNGMEL---------QPDHATLVVTLSACGAIGSLDF 234
Query: 240 GEWIHNFLV--TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G +H+F+ N F + V A++DMY KCG E A + F+ + +K + WN M+ G
Sbjct: 235 GRKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGF 294
Query: 298 AMNGYENEAIKLFSGLQSSNL-KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
A +G EA+ LF+ + N+ +PD I+F+ VL AC+H G V++ + YF +M Y IKP
Sbjct: 295 ASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKP 354
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+IKHY CMVD LGRAGL EA +LI+SMP + +AIIW +LL+ACR +GN+E+ ++ K +
Sbjct: 355 TIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACRNYGNVELGEKVRKHL 414
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK-EPGCSLIEVDG 468
+EL+ + S YVL++N+YA++ Q+ E +ER M+E ++ K EPG S I + G
Sbjct: 415 MELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQERRVRKPEPGNSFIGIPG 467
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 137/292 (46%), Gaps = 12/292 (4%)
Query: 128 TIIYMYANCGFLSEARLMFDEV---DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
T++ ++ +C L+ + + + +++ +I+ A ++ + +FDK+
Sbjct: 14 TLMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFDKIPKP 73
Query: 185 NTVSWNSMISGYVRNVKFKE-ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
++ WN+MI G+ + A+ F+ MQ + +P FT +L A+L + G+ +
Sbjct: 74 DSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAH-RPDNFTFSFILKIIARLRFVNLGKQL 132
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H L FE +T V ++I MY E A Q+F + + L WNS++ G
Sbjct: 133 HCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKY 192
Query: 304 NEAIKLFSGL--QSSN---LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE-TYKIKPS 357
NEAI LF+ + Q N L+PD+ + + L+AC G ++ + + + + S
Sbjct: 193 NEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGES 252
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
I ++ +VD + G +EEA + +M + + W ++ HGN E A
Sbjct: 253 ISVFNALVDMYAKCGAVEEAYETFSNMKRK-NVVSWNVMILGFASHGNGEEA 303
>gi|357477477|ref|XP_003609024.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510079|gb|AES91221.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 544
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/519 (34%), Positives = 287/519 (55%), Gaps = 53/519 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKD-PIAASRILAFCTSPAGDINYAYLVF--TQIKKPNLFIWNT 57
M +LK++ A + K+GL P+ I SP G++++AY +F + I N FI NT
Sbjct: 19 MSELKQLQAIITKSGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSILIHNPFISNT 78
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQ---RLTYPSLFKAYAQLG------------ 102
+IR FS S P A+L++ ML+ + + + +AY +
Sbjct: 79 MIRAFSHSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQESGSCDDDDDNL 138
Query: 103 --LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV-DTEF------ 153
+ G ++H RV+K G + D + N+++Y Y+ CG +S AR +FD++ DT
Sbjct: 139 VVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARYLFDQIKDTSLVSWNIM 198
Query: 154 -----------------------DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
V++WN++I + G++ +RR+F M RN VSWN
Sbjct: 199 ISAYDRVDDYELADHLLELMPCKTVISWNTLIARYIRLGDVQAARRVFGCMPERNAVSWN 258
Query: 191 SMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN 250
SMI+G V + ALELF EMQ +KP+E T++S+L ACA+ GA+ G I+ L
Sbjct: 259 SMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESLKVC 318
Query: 251 CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLF 310
++ + + A+++MYCKCG A ++FN + K +SCWN+MV GLA++GY E +LF
Sbjct: 319 EHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLF 378
Query: 311 SGLQSS---NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
+ ++ S +++PD ++FI VL AC+H G V++A+ YF M + YKI P KHY CMVD
Sbjct: 379 TEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDL 438
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGY 427
L R GLLEEA ++I + P ++W +LL ACR N E+A+ + KQ+ +L + Y
Sbjct: 439 LTRRGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAKLKQLIDGDY 498
Query: 428 VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
VL+SN+YA + +++E R M + + ++ G S I +
Sbjct: 499 VLLSNIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQINM 537
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 275/459 (59%), Gaps = 10/459 (2%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
+F ++ + + WNT+I G++Q+ A LF + SP++ T+ ++ Y Q G
Sbjct: 145 IFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE----SPVR-DVFTWTAMVSGYVQNG 199
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ + RV E + N II Y C + +AR +F+ + + +V +WN+MI
Sbjct: 200 MLDEAR----RVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMI 254
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G A+ G+I ++R FD+M R+++SW ++I+GY ++ +EAL LF EM+ + +
Sbjct: 255 TGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRS 314
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T S L+ CA++ A+ G+ +H +V E V A++ MYCKCG + A VF +
Sbjct: 315 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 374
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
+K + WN+M+ G A +G+ EA+ LF ++ + + PD ++ + VL+AC+H+G V++
Sbjct: 375 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 434
Query: 343 DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
+YF MT+ Y I + KHY+CM+D LGRAG L++A+ L+++MP +PDA WG+LL A R
Sbjct: 435 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 494
Query: 403 HGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS 462
HGN E+ ++AAK I E++ + S YVL+SNLYAAS ++ + RL M++ ++K PG S
Sbjct: 495 HGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 554
Query: 463 LIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+EV ++H F G +HP+ +Y L +L L +++ G
Sbjct: 555 WVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEG 593
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 121/504 (24%), Positives = 221/504 (43%), Gaps = 69/504 (13%)
Query: 36 DINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLF 95
++ A L+F Q+ + ++ WN ++ G++Q+ + A +F +M + I ++ +
Sbjct: 45 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSI-----SWNGML 99
Query: 96 KAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDV 155
AY Q G D R+ + +++ N ++ Y L +AR +FD + E D
Sbjct: 100 AAYVQNGRIEDAR----RLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRM-PERDE 154
Query: 156 VAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ 215
V+WN+MI G A+ GE+ E++RLF++ R+ +W +M+SGYV+N EA +F M E+
Sbjct: 155 VSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK 214
Query: 216 NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
N S +++ C ++ R E N NT++ Y + G +A
Sbjct: 215 N-SVSWNAIIAGYVQCKRMDQAR--ELFEAMPCQNVSSWNTMITG-----YAQNGDIAQA 266
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH- 334
F+ +P++ W +++ G A +GY EA+ LF ++ + + +F + L+ C
Sbjct: 267 RNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEI 326
Query: 335 ---------SGKVNQAK---------------------DYFTLMTETYKIKPSIKHYSCM 364
G+V +A D ++ E + K + ++ M
Sbjct: 327 AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVS-WNTM 385
Query: 365 VDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIEMAKQ---AAKQIIE 418
+ R G +EA L SM PD + +LSAC G ++ + + Q
Sbjct: 386 IAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYG 445
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP-------GCSLIEVDGEVH 471
+ N S Y M +L + + ++A LMK + E + G S I + E+
Sbjct: 446 ITAN-SKHYTCMIDLLGRAGRLDDAQN---LMKNMPFEPDAATWGALLGASRIHGNTELG 501
Query: 472 EFVAGG--RLHPKAPEVYLLLNDL 493
E A + P +Y+LL++L
Sbjct: 502 EKAAKMIFEMEPDNSGMYVLLSNL 525
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 35/269 (13%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GDI A F ++ + + W II G++QS A+ LF++M + R T+ S
Sbjct: 261 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGE-RLNRSTFTST 319
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A++ G Q+HGRVVK GLE ++ N ++ MY CG + +A ++F+ ++ E +
Sbjct: 320 LSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIE-EKE 378
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
VV+WN+MI G Y R+ KEAL LF M++
Sbjct: 379 VVSWNTMIAG-------------------------------YARHGFGKEALMLFESMKK 407
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
I P + TMV +L+AC+ G + +G E+ ++ N+ T +ID+ + G +
Sbjct: 408 TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLD 467
Query: 274 RALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
A + +P + + W +++ ++G
Sbjct: 468 DAQNLMKNMPFEPDAATWGALLGASRIHG 496
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 157/333 (47%), Gaps = 24/333 (7%)
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
EFD + + + G + + +R LFD+M R+ VSWN+M+SGY +N KEA E+F E
Sbjct: 28 EFDFLERHD-LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDE 86
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M +N + +L A + G I + F +EL I ++ Y K
Sbjct: 87 MPCKN----SISWNGMLAAYVQNGRIEDARRL--FESKADWEL--ISWNCMMGGYVKRNR 138
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A +F+ +P++ WN+M+ G A NG EA +LF + S ++ D ++ A+++
Sbjct: 139 LVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLF---EESPVR-DVFTWTAMVSG 194
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
+G +++A+ F M E + ++ ++ + +++A +L +MP +
Sbjct: 195 YVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQ-NVS 248
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
W ++++ ++G+I A+ ++ + D S + + YA S EEA+ + MK
Sbjct: 249 SWNTMITGYAQNGDIAQARNFFDRMPQRD---SISWAAIIAGYAQSGYGEEALHLFVEMK 305
Query: 452 E--VKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
++ + S + E+ G ++H +
Sbjct: 306 RDGERLNRSTFTSTLSTCAEIAALELGKQVHGR 338
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
K++H ++K GL + +L +C G+I+ AY+VF I++ + WNT+I G++
Sbjct: 333 KQVHGRVVKAGLESGCYVGNALLVMYCK--CGNIDDAYIVFEGIEEKEVVSWNTMIAGYA 390
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQ-LHGRVVKQGLEFD 122
+ + A++LF M T I P +T + A + GL G + + G+ +
Sbjct: 391 RHGFGKEALMLFESMKKTG-ILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITAN 449
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ +I + G L +A+ + + E D W +++
Sbjct: 450 SKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 489
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 302/554 (54%), Gaps = 74/554 (13%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
LK+IHA L+ GL ++++ +S GDI +A VF + +P +F WN IIRG+S
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+++ ++A+L++ +M + + P T+P L KA + L + G +H +V + G + D
Sbjct: 96 RNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 124 FIHN---------------------------------TIIYMYANCGFLSEARLMFD--- 147
F+ N I+ YA G EA +F
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMR 214
Query: 148 EVDTEFDVVAWNSMI---------------------IGL--------------AKCGEID 172
++D + D VA S++ +GL AKCG++
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
++ LFDKM S N + WN+MISGY +N +EA+++F EM ++++P ++ S ++ACA
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA 334
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
++G++ Q ++ ++ + + + + +A+IDM+ KCG E A VF+ + + W++
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
M+ G ++G EAI L+ ++ + P+ ++F+ +L ACNHSG V + +F LM + +
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-H 453
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
KI P +HY+C++D LGRAG L++A ++I+ MP P +WG+LLSAC+KH ++E+ + A
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA 513
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A+Q+ +D + + YV +SNLYAA+ ++ E R+ MKE + K+ GCS +EV G +
Sbjct: 514 AQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573
Query: 473 FVAGGRLHPKAPEV 486
F G + HP+ E+
Sbjct: 574 FRVGDKSHPRYEEI 587
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
S+ SL+++ ++Q IH L+ + + ++T +I G A QVF
Sbjct: 20 SDSFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+ +P+ + WN+++ G + N + +A+ ++S +Q + + PD +F +L AC+
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/495 (34%), Positives = 290/495 (58%), Gaps = 36/495 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPA-GDINYAYLVFTQIKKPNLFIWNTI 58
+++L +I A+ IK+ + +D ++++ FCT SP ++YA +F + +P++ I+N++
Sbjct: 42 LRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSM 100
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG+S+ + P LF+++L I P T+PSL KA A +G QLH +K G
Sbjct: 101 ARGYSRFTNPLEVFSLFVEIL-EDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 159
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L+ + ++ T+I MY +C ++D +R +F
Sbjct: 160 LDDNVYVCPTLINMYT--------------------------------ECEDVDSARCVF 187
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D++V V +N+MI+GY R + EAL LFREMQ + +KP+E T++S+L++CA LG++
Sbjct: 188 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD 247
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+WIH + + F V TA+IDM+ KCG + A+ +F + K W++M+ A
Sbjct: 248 LGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYA 307
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +++ +F ++S N++PD I+F+ +L AC+H+G+V + + YF+ M + I PSI
Sbjct: 308 NHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSI 367
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
KHY MVD L RAG LE+A + I +P P ++W LL+AC H N+++A++ +++I E
Sbjct: 368 KHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFE 427
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD + YV++SNLYA + ++E R +MK+ K K PGCS IEV+ VHEF +G
Sbjct: 428 LDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDG 487
Query: 479 LHPKAPEVYLLLNDL 493
+ +++ L+++
Sbjct: 488 VKSATTKLHRALDEM 502
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 180/493 (36%), Positives = 281/493 (56%), Gaps = 55/493 (11%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ L +IHA + L + +++++ S ++YA +F PNLF++N +IR
Sbjct: 53 LPQLHQIHAQIFLHNLFSNSRVVTQLISSSCS-LKSLDYALSIFRCFDHPNLFVFNALIR 111
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G +++S ++ F+ ML S I+P RLT P + K+ A L G LHG V+K GLE
Sbjct: 112 GLAENSRFEGSVSHFVLMLRLS-IRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLE 170
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
FD F+ +++ MY K GE+ +LFD+
Sbjct: 171 FDSFVRVSLVDMYV--------------------------------KIGELGFGLQLFDE 198
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
RN E++ L+ ++P++ T+VS L AC K+GA++ G
Sbjct: 199 SPQRNKA----------------ESILLW-----NGVRPNDLTVVSALLACTKIGALQVG 237
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
E IHN+L +N F+LN + TA++DMY KCG + A +VF K L W+ M++G A++
Sbjct: 238 ERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIH 297
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G ++A++ F ++S+ + PD + F+A+LTAC+HSG V+Q ++F M Y I+P++KH
Sbjct: 298 GCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKH 357
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+ +VD LGRAG L+EA I+SMP +PD +IWG+L ACR H NIEMA+ A+++++L+
Sbjct: 358 YTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLE 417
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
YV +SN+YAA ++E+ R LMK +EK+PG S IEV+G+VH FVAG H
Sbjct: 418 PKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAH 477
Query: 481 PKAPEVYLLLNDL 493
+A E+ L L ++
Sbjct: 478 VRAEEISLKLEEI 490
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 272/488 (55%), Gaps = 34/488 (6%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H +K+G D + IL + AYLVF ++++ + WN II Q+
Sbjct: 374 QVHCLAVKSGFDVDVCVRNAILDLYGKCKALVE-AYLVFQEMEQRDSVSWNAIIAALEQN 432
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ I +ML S ++P TY S+ KA A L G +HG+ +K GL D F+
Sbjct: 433 ECYEDTIAHLNEML-RSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFV 491
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+T++ MY KCG I E+++L D++ +
Sbjct: 492 SSTVVDMYC--------------------------------KCGAITEAQKLHDRIGGQE 519
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSWNS+ISG+ + +EA F EM + +KP FT ++L+ CA L I G+ IH
Sbjct: 520 LVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHG 579
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + + + ++DMY KCG +L +F K WN+M+ G A++G E
Sbjct: 580 QIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLE 639
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+++F +Q +N+ P++ +F+AVL AC+H G ++ YF LMT YK+ P ++H++CMV
Sbjct: 640 ALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMV 699
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGR+ +EA + IRSMP + DA++W +LLS C+ ++E+A+ AA ++ LD +++
Sbjct: 700 DILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDAS 759
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
Y+L+SN+YA S ++ + R LM++ ++ KEPGCS IEV E+H F+ G ++HP++ E
Sbjct: 760 VYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKE 819
Query: 486 VYLLLNDL 493
VY +LN L
Sbjct: 820 VYEMLNSL 827
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 175/398 (43%), Gaps = 47/398 (11%)
Query: 8 HAH-LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
HAH + T +D ++ + +L AGD + A +F + P++ WNT+I G+ Q
Sbjct: 72 HAHGVFDTMPHRDTVSWNTMLT-AYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHG 130
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
RN++ L ++M + R T L K+ L G Q+H VK GLE D
Sbjct: 131 MFRNSVGLSMEM-SRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAG 189
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+ ++ MY KC +D++ R F M RN+
Sbjct: 190 SALVDMYG--------------------------------KCRSLDDALRFFHGMGERNS 217
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSW + I+G V+N ++ +ELF +MQ + S+ S +CA + + +H
Sbjct: 218 VSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAH 277
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ N F + +V TAI+D+Y K G A + F +P + N+M+ GL G EA
Sbjct: 278 AIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEA 337
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT-LMTETYKIKPSIKHYSC-- 363
++LF + S + D IS V +AC + K YF L +K C
Sbjct: 338 MQLFQFMTRSGVGFDVISLSGVFSAC------AEVKGYFQGLQVHCLAVKSGFDVDVCVR 391
Query: 364 --MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
++D G+ L EA + + M D++ W ++++A
Sbjct: 392 NAILDLYGKCKALVEAYLVFQEM-EQRDSVSWNAIIAA 428
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 178/408 (43%), Gaps = 50/408 (12%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++HAH IK + D + + I+ + AG++ A F + N+ N ++ G +
Sbjct: 272 RQLHAHAIKNVFSSDRVVGTAIVDV-YAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVR 330
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ LF + S + ++ +F A A++ G Q+H VK G + D
Sbjct: 331 TGLGAEAMQLF-QFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVC 389
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N I+ +Y C L EA L+F E++ + D V+WN++I L +
Sbjct: 390 VRNAILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAALEQ----------------- 431
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N +++ + EM ++P +FT S+L ACA L ++ G +H
Sbjct: 432 --------------NECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVH 477
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + L+ V + ++DMYCKCG A ++ + + + L WNS++ G ++
Sbjct: 478 GKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSE 537
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA + FS + +KPD+ ++ VL C + + K + + + S +
Sbjct: 538 EAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYIS-STL 596
Query: 365 VDALGRAG-------LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
VD + G + E+A KL D + W +++ HG
Sbjct: 597 VDMYAKCGNMPDSLLMFEKARKL--------DFVSWNAMICGYALHGQ 636
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 135/298 (45%), Gaps = 4/298 (1%)
Query: 90 TYPSLFKAYAQLGLA--RDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFD 147
T+ L++ A G + G H R++ G F+ N ++ MYA CG + A +FD
Sbjct: 19 TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
+ D V+WN+M+ G+ D + LF M + VSWN++ISGY ++ F+ ++
Sbjct: 79 TMPHR-DTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVG 137
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
L EM + + T+ LL +C L + G IH V E + +A++DMY
Sbjct: 138 LSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYG 197
Query: 268 KCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIA 327
KC + AL+ F+ + ++ W + + G N ++LF +Q L ++ +
Sbjct: 198 KCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYAS 257
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+C ++ A+ + + + +VD +AG L +A + +P
Sbjct: 258 AFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVG-TAIVDVYAKAGNLVDARRAFIGLP 314
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 189/485 (38%), Gaps = 80/485 (16%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAF---CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+IHA +KTGL D A S ++ C S ++ A F + + N W I G
Sbjct: 172 QIHALAVKTGLETDVRAGSALVDMYGKCRS----LDDALRFFHGMGERNSVSWGAAIAGC 227
Query: 63 SQSSTPRNAILLFIDM--LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
Q+ + LF+ M L QP Y S F++ A + QLH +K
Sbjct: 228 VQNEQYTRGMELFVQMQRLGLGVSQP---AYASAFRSCAAMPCLSTARQLHAHAIKNVFS 284
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D+ + I+ +YA K G + ++RR F
Sbjct: 285 SDRVVGTAIVDVYA--------------------------------KAGNLVDARRAFIG 312
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ N + N+M+ G VR EA++LF+ M + ++ + +ACA++ QG
Sbjct: 313 LPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQG 372
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H V + F+++ V AI+D+Y KC A VF + ++ WN+++ L N
Sbjct: 373 LQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQN 432
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACN-----HSGKVNQAK--------DYFT- 346
+ I + + S ++PD ++ +VL AC G V K D F
Sbjct: 433 ECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVS 492
Query: 347 -----------LMTETYKIKPSIK-----HYSCMVDALGRAGLLEEAEKLIR---SMPSD 387
+TE K+ I ++ ++ EEA++ M
Sbjct: 493 STVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVK 552
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEER 447
PD + ++L C IE+ KQ QII K E G +S+ Y M +
Sbjct: 553 PDHFTYATVLDTCANLATIELGKQIHGQII---KQEMLGDEYISSTLVDMYAKCGNMPDS 609
Query: 448 LLMKE 452
LLM E
Sbjct: 610 LLMFE 614
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/468 (36%), Positives = 282/468 (60%), Gaps = 11/468 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K HA +KTG D S ++ T G ++ A VF ++ L +WN ++R + +
Sbjct: 69 RKAHAAAVKTGFRWDAYTGSSLMEMYTM-LGRVDIARKVFDEMPSRALVLWNMMVRCYIR 127
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD---GAQLHGRVVKQGLEF 121
A+ L + + S + P R+T L A ARD G ++H + F
Sbjct: 128 CGWYSAAVALS-EQMERSGVTPDRVT---LVTAVTACSRARDLSLGRRIH-VYMDNVFGF 182
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ + N ++ MY L EA +F+++ ++++W ++ G G++D++R LF++
Sbjct: 183 NLPVANALLDMYTKNDCLEEAVKLFEQMPAR-NIISWTILVSGYGLAGQLDKARVLFNQC 241
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ + W +MI+ V++ F+EAL LFR+MQ Q ++P FT+V+LL CA LGA+ QGE
Sbjct: 242 KEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGE 301
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
WIH + +++ ++ TA+IDMY KCG E++L+VF + + + W +++ GLA NG
Sbjct: 302 WIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNG 361
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
A++LF +Q S +KPD ++FI VL+AC H G V++ + F M E Y+I+P ++HY
Sbjct: 362 QAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHY 421
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAI-IWGSLLSACRKHGNIEMAKQAAKQIIELD 420
SC+V+ LGRAGLL+EAE+LI +P + DA+ ++G+LL+AC+ HGN+EM+++ K+I E D
Sbjct: 422 SCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQD 481
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
+ +LMSN+YA + ++E+ + R M ++K GCSLIEV G
Sbjct: 482 SQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKNAGCSLIEVKG 529
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 162/381 (42%), Gaps = 67/381 (17%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N +IR ++ + + ++ D L + TYP + +A L L+ +G + H V
Sbjct: 18 NVLIRTLARRGSFARVMAVYYD-LRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAV 76
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G +D + ++++ MY G + AR +FDE+ + +V WN M+ +CG
Sbjct: 77 KTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSR-ALVLWNMMVRCYIRCG------ 129
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
W + A+ L +M+ + P T+V+ + AC++
Sbjct: 130 -------------W------------YSAAVALSEQMERSGVTPDRVTLVTAVTACSRAR 164
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV- 294
+ G IH ++ N F N V A++DMY K C E A+++F +P + + W +V
Sbjct: 165 DLSLGRRIHVYM-DNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVS 223
Query: 295 -FGLA-----------------------------MNGYENEAIKLFSGLQSSNLKPDYIS 324
+GLA +G EA+ LF +Q ++PD +
Sbjct: 224 GYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFT 283
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
+ +LT C + G ++Q ++ E K+K + ++D + G +E++ ++ M
Sbjct: 284 VVTLLTCCANLGALDQG-EWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRM 342
Query: 385 PSDPDAIIWGSLLSACRKHGN 405
DA W +++ +G
Sbjct: 343 QG-RDATAWTAIICGLATNGQ 362
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
N +I R F + ++ +++ + + FT +L A L +G H V
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAVK 77
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
F + +++++MY G + A +VF+ +P + L WN MV G+ + A+ L
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGWYSAAVAL 137
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
++ S + PD ++ + +TAC+ + ++ + M + + + ++D
Sbjct: 138 SEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVAN--ALLDMYT 195
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVL 429
+ LEEA KL MP+ + I W L+S G ++ A+ Q E D +L
Sbjct: 196 KNDCLEEAVKLFEQMPA-RNIISWTILVSGYGLAGQLDKARVLFNQCKEKD------LIL 248
Query: 430 MSNLYAASYQ---FEEAMEERLLMKEVKIEK-EP 459
+ + A Q FEEA+ L +++++++ EP
Sbjct: 249 WTAMINACVQHGCFEEALT---LFRDMQMQRVEP 279
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 307/567 (54%), Gaps = 75/567 (13%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKP--NLFIWNTI 58
+ ++++HA L+K GL DP+AAS++++ + + + +F P F+ NT+
Sbjct: 71 LHHVQELHAQLLKHGLHLDPLAASKLIS-SYALQRRLPASRRIFASFPNPQATTFLPNTL 129
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+R ++ ++ P A+ LF M PQR TY L KA + GL A +H VVK
Sbjct: 130 LRAYALNALPHAAVSLFSAM-------PQRDSFTYSFLIKALSSSGLTPLRA-VHSHVVK 181
Query: 117 QGLEFDQFIHNTIIYMYA-NCGFL------------------------------SEARLM 145
G D ++ N +I Y+ N GFL + AR M
Sbjct: 182 LGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRM 241
Query: 146 FDEV---DT---------------------------EFDVVAWNSMIIGLAKCGEIDESR 175
FDE+ DT E +VV+W++++ G K G+I+ +R
Sbjct: 242 FDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMAR 301
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+FDKM ++N V+W M+S +N +EA LF +M+E ++ +VS+L ACA+ G
Sbjct: 302 VIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESG 361
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT-VPKKGLSCWNSMV 294
++ G+ IH ++ T +T V A+IDM+CKCGC RA VF+T + +K WN+++
Sbjct: 362 SLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTII 421
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G AM+G+ ++A+ F+ ++ +PD ++ I VL+AC H G V + + +F+ M Y I
Sbjct: 422 GGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGI 481
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P I+HY CM+D LGR GL+EEA LI+SMP DP+ +IWGSLLSACR H N+E A+ A
Sbjct: 482 VPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVN 541
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
++ +L + + Y ++SN+YA + Q+ + + R+ MK +K G S IE+D HEF
Sbjct: 542 ELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWIELDEAFHEFT 601
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G R H + ++ +++ L ++++G
Sbjct: 602 VGDRKHSDSDQISEMVDRLSSHVKDVG 628
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 290/506 (57%), Gaps = 20/506 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++ +HL G ++ A +++ FC+ +++YA+ +F I PN++++ II
Sbjct: 19 LNQLKQLQSHLTTLGHSQTHFYAFKLIRFCSLNLSNLHYAHQIFNHIHSPNIYLFTAIIT 78
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
FS S LF ML S I+P YP + K+ + L +H ++VK G
Sbjct: 79 AFS--SQQHTTFKLFKTML-NSNIRPNNFIYPHVLKSVKERFLVD---LVHAQIVKCGFL 132
Query: 121 FDQFIHNTIIYMYANC-GFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ +++ Y+ G L +A +FDE+ +E ++V + ++ G + G++++ +FD
Sbjct: 133 NYPVVETSLVDSYSKVLGGLRDAHKVFDEM-SERNIVVFTVLVSGYLRVGDVEKGLMVFD 191
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE----------QNIKPSEFTMVSLLN 229
+MV R+ +WN++ISG +N F E + LFREM + KP++ T+V +L+
Sbjct: 192 EMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLS 251
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
AC G ++ G+WIH ++ + F +++ V A++DMY KCG E A +VF +KGL+
Sbjct: 252 ACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTS 311
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQ--SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
WNSM+ A++G +AI F + ++PD ++FI +L AC H G V Q YF +
Sbjct: 312 WNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEM 371
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
M + Y I+P I HY C++D LGRAG +EA +++ M +PD ++WGSLL+ C+ HG +
Sbjct: 372 MIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTD 431
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
+A+ AAK+++E+D + +++N+Y +++E +K+ K K PGCS IEVD
Sbjct: 432 LAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCSWIEVD 491
Query: 468 GEVHEFVAGGRLHPKAPEVYLLLNDL 493
+VH+F + + +PK E+Y +L L
Sbjct: 492 DKVHQFFSLDQSNPKTEELYNILESL 517
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/471 (34%), Positives = 272/471 (57%), Gaps = 6/471 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+ A VF ++ +WN +I G+ S A LF M++ + T+ S+
Sbjct: 242 GDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLER-VPLDEFTFTSV 300
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQ----FIHNTIIYMYANCGFLSEARLMFDEVD 150
A A +GL G +HG++++ F ++N ++ Y+ CG ++ AR +FD +
Sbjct: 301 LSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNM- 359
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
T DVV+WN+++ G + +D++ +F++M +N +SW M+SGYV ++AL+LF
Sbjct: 360 TLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFN 419
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M+ +N+KP ++T + AC +LGA++ G+ +H +V FE + A+I MY +CG
Sbjct: 420 KMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCG 479
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
+ A +F +P WN+M+ L +G+ EA++LF + + + PD ISF+ VLT
Sbjct: 480 AVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLT 539
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
ACNHSG V++ YF M + I P HY+ ++D LGRAG + EA LI++MP +P
Sbjct: 540 ACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTP 599
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
IW ++LS CR G++E+ AA Q+ ++ Y+L+SN Y+A+ + +A R LM
Sbjct: 600 SIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLM 659
Query: 451 KEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ ++KEPGCS IE +VH F+ G HP+A EVY L +G ++++G
Sbjct: 660 RDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLG 710
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 201/429 (46%), Gaps = 48/429 (11%)
Query: 20 PIAASRILAFCTSPAGDINYAYLVFTQIKKP---NLFIWNTIIRGFSQSSTPRNAILLFI 76
P++A+ ++A A D A + F P + + N +I ++++S A+ +F
Sbjct: 88 PVSATSLVA--AYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFR 145
Query: 77 DMLVTSPIQPQRLTYPSLFKAYAQLG--LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYA 134
+L + ++P ++ +L A L R AQLH V+K G + N ++ +Y
Sbjct: 146 SLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYM 205
Query: 135 NCG---FLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNS 191
C +AR + DE+ + D+ W +M++G + G++ +R +F+++ + V WN+
Sbjct: 206 KCESPEATRDARKVLDEMPNKDDLT-WTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNA 264
Query: 192 MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH------- 244
MISGYV + EA ELFR M + + EFT S+L+ACA +G G+ +H
Sbjct: 265 MISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQ 324
Query: 245 -NFLVTNCFELNTIVVT---------------------------AIIDMYCKCGCPERAL 276
NF+ +N +VT I+ Y + C ++A+
Sbjct: 325 PNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAV 384
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
+VF +P K W MV G G+ +A+KLF+ ++S N+KP ++ + AC G
Sbjct: 385 EVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELG 444
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
+ K + + + S + ++ R G ++EA + MP + D++ W ++
Sbjct: 445 ALKHGKQLHGHIVQ-LGFEGSNSAGNALITMYARCGAVKEAHLMFLVMP-NIDSVSWNAM 502
Query: 397 LSACRKHGN 405
+SA +HG+
Sbjct: 503 ISALGQHGH 511
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 109/254 (42%), Gaps = 17/254 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K K++H H+++ G A + ++ + G + A+L+F + + WN +I
Sbjct: 446 LKHGKQLHGHIVQLGFEGSNSAGNALITM-YARCGAVKEAHLMFLVMPNIDSVSWNAMIS 504
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GL 119
Q R A+ LF D +V I P R+++ ++ A GL +G + + + G+
Sbjct: 505 ALGQHGHGREALELF-DRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGI 563
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ + +I + G + EAR + + E W +++ G G+++ D
Sbjct: 564 IPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAAD 623
Query: 180 ---KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
KM ++ ++ + + Y + +A + + M+++ +K C+
Sbjct: 624 QLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEP--------GCSW--- 672
Query: 237 IRQGEWIHNFLVTN 250
I G +H FLV +
Sbjct: 673 IEAGNKVHVFLVGD 686
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 289/503 (57%), Gaps = 11/503 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+KIHA ++ G D + A+ ++ G + A VF ++KK ++ WN +I + Q
Sbjct: 227 RKIHAEIVANGFDSDLVVATALINM-YGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQ 285
Query: 65 SSTPRNAILLF--IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ A+ L+ +DM + + T+ S+ A + + G +H ++++GL+ +
Sbjct: 286 NGDFHEALELYQKLDM---EGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSE 342
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG---EIDESRRLFD 179
+ ++ MYA CG L EAR +F+ + D VAW+++I A G + ++R++FD
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGAYASNGYGKDARKARKVFD 401
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIR 238
++ SR+T+ WN+MI+ YV+N A+++FREM +KP T +++L ACA LG +
Sbjct: 402 RLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLS 461
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+ + +H + + E N +V +I+MY +CG E A ++F +K + W +MV +
Sbjct: 462 EVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFS 521
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
G EA+ LF + +KPD +++ ++L C H G + Q YFT M E + + P+
Sbjct: 522 QYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTA 581
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
H++ MVD LGR+G L +A++L+ SMP +PD + W + L+ACR HG +E+ + AA+++ E
Sbjct: 582 DHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYE 641
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD + + Y+ MSN+YAA +E+ R M+E ++K PG S IEVDG++HEF +GG+
Sbjct: 642 LDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGK 701
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
HP+ E+ L L L++ G
Sbjct: 702 YHPRTDEICEELTRLHGLMRAAG 724
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 215/425 (50%), Gaps = 21/425 (4%)
Query: 19 DPIAASRILAFCTSPAGDINYAYLVFTQIK----KPNLFIWNTIIRGFSQSSTPRNAILL 74
D + +L C+S GD+ + +I+ + + + N +I + + + +A +
Sbjct: 6 DNVTFLTVLCSCSS-CGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 75 FIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYA 134
F M Q +++ ++ AYAQ G + + L+ R+ QGL D H T + +
Sbjct: 65 FESM---DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTD---HVTFVSVLG 118
Query: 135 NCGFLSEARLMFDEV-----DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 189
C L++ R + + V D+ F +A N+++ A+ G + +++R+F + +R+ SW
Sbjct: 119 ACSSLAQGREIHNRVFYSGLDS-FQSLA-NALVTMYARFGSVGDAKRMFQSLQTRDETSW 176
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
N++I + ++ + AL +F+EM+ ++KP+ T +++++ + + +G IH +V
Sbjct: 177 NAVILAHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA 235
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
N F+ + +V TA+I+MY KCG A +VF+ + K+ + WN M+ NG +EA++L
Sbjct: 236 NGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALEL 295
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
+ L K +F+++L AC+ + Q + + + E + + + +V+
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER-GLDSEVAVATALVNMYA 354
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVL 429
+ G LEEA K+ +M + DA+ W +L+ A +G + A++A K L ++ +
Sbjct: 355 KCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNA 413
Query: 430 MSNLY 434
M Y
Sbjct: 414 MITTY 418
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/481 (34%), Positives = 272/481 (56%), Gaps = 3/481 (0%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H ++K G + +L S AG + + F ++ N+ WN++I G++Q+
Sbjct: 133 HGVVVKLGFVGQVFVGNALLHSYAS-AGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGN 191
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
R A LF M + + T SL A + G G +H ++ +G D + N
Sbjct: 192 TREACSLFEGMRRQGLLADE-FTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILAN 250
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
++ MY CG L A FD + + + V+W SM+ LAK ID +R F+++ ++ +
Sbjct: 251 ALVDMYGKCGDLLMAHTCFDMMPFK-NAVSWTSMLCALAKRASIDAARDWFEQIPEKSII 309
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
SWN+MIS YV+ +F EAL+L+ M+ + P EFT+ ++L+AC +LG + G+ IH+ +
Sbjct: 310 SWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCI 369
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
N + +++DMY +CG + A+ +F+ +P K + WN+++ LAM+G +A+
Sbjct: 370 RDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDAL 429
Query: 308 KLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
F + S PD I+F+A+L+ACNH G + + YF M Y +KP ++HY+CMVD
Sbjct: 430 MFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDL 489
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGY 427
LGR G L +A LI+ MP PD ++WG+LL ACR HG+I++ KQ KQ++EL+ +
Sbjct: 490 LGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLF 549
Query: 428 VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
VL+SN+ ++Q+E+ R LM+E ++K G S IE + +HE A G H + ++Y
Sbjct: 550 VLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHESGAEGIGHESSDDMY 609
Query: 488 L 488
+
Sbjct: 610 V 610
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 205/438 (46%), Gaps = 69/438 (15%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTIIRGF 62
L ++HAHL+ G+ D + + + ++C PAG + YA +F +I P+ F++N++IR +
Sbjct: 28 LNQLHAHLVVHGV--DDVTSQILASYCALPAGGGVWYARQLFDRIPDPDRFVYNSLIRAY 85
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
S P+ A+ L M + I P T P L KA A++ HG VVK G
Sbjct: 86 CNSHCPQEALPLLRGM-IRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQ 144
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ N +++ YA+ G L ++R FDE+ + +VV+WNSMI G A+ G
Sbjct: 145 VFVGNALLHSYASAGSLGDSRRFFDEM-VDRNVVSWNSMINGYAQAG------------- 190
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
NT +EA LF M+ Q + EFT+VSLL AC+ G + G+
Sbjct: 191 --NT----------------REACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKL 232
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCG------------------------CP------ 272
+H+ L+ ++ I+ A++DMY KCG C
Sbjct: 233 VHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRAS 292
Query: 273 -ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ A F +P+K + WN+M+ G +EA+ L++ ++ L PD + AVL+A
Sbjct: 293 IDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSA 352
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C G + K + + + P + ++ ++D R G ++ A L MPS + I
Sbjct: 353 CGQLGDLASGKMIHDCIRDNFH-NPGVALFNSLLDMYARCGQVDTAISLFSEMPSK-NVI 410
Query: 392 IWGSLLSACRKHGNIEMA 409
W +++ A HG + A
Sbjct: 411 SWNAIIGALAMHGRAQDA 428
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 149/319 (46%), Gaps = 9/319 (2%)
Query: 165 LAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
L G + +R+LFD++ + +NS+I Y + +EAL L R M + I P+EFT+
Sbjct: 54 LPAGGGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTL 113
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
LL ACA++ A H +V F V A++ Y G + + F+ +
Sbjct: 114 PFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVD 173
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
+ + WNSM+ G A G EA LF G++ L D + +++L AC+ G + K
Sbjct: 174 RNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLV 233
Query: 345 FT-LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
+ L+ +I + + +VD G+ G L A MP +A+ W S+L A K
Sbjct: 234 HSHLLVRGCRIDLILA--NALVDMYGKCGDLLMAHTCFDMMPFK-NAVSWTSMLCALAKR 290
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME--ERLLMKEVKIEKEPGC 461
+I+ A+ +QI E + M + Y +F EA++ R+ + + ++
Sbjct: 291 ASIDAARDWFEQIPE---KSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLA 347
Query: 462 SLIEVDGEVHEFVAGGRLH 480
+++ G++ + +G +H
Sbjct: 348 AVLSACGQLGDLASGKMIH 366
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/477 (35%), Positives = 278/477 (58%), Gaps = 35/477 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
LK+IH + + G KD + A+ +A + ++ A VF ++ + WN +I +
Sbjct: 420 LKEIHGYAFRHGFLKDELVANAFVA-AYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHA 478
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
Q+ P ++ LF+ M+ S + P R T SL A A+L R G ++HG +++ GLE D+
Sbjct: 479 QNGFPGKSLDLFLVMM-DSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDE 537
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
FI +++ +Y C +SM++G + +FDKM +
Sbjct: 538 FIGISLMSLYIQC----------------------SSMLLG----------KLIFDKMEN 565
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
++ V WN MI+G+ +N EAL+ FR+M IKP E + +L AC+++ A+R G+ +
Sbjct: 566 KSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEV 625
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H+F + + V A+IDMY KCGC E++ +F+ V +K + WN ++ G ++G+
Sbjct: 626 HSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHG 685
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+AI+LF +Q+ +PD +F+ VL ACNH+G V + Y M Y +KP ++HY+C
Sbjct: 686 LKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYAC 745
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+VD LGRAG L EA KL+ MP +PD+ IW SLLS+CR +G++E+ ++ +K+++EL+ N+
Sbjct: 746 VVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNK 805
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF-VAGGRL 479
+ YVL+SNLYA +++E + R MKE + K+ GCS IE+ G V+ F V+ G L
Sbjct: 806 AENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSL 862
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 161/337 (47%), Gaps = 44/337 (13%)
Query: 5 KKIHAHLIKT-GLAKDPIAASRILAF---CTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K+HA + + L D + ++RI+A C SP+ VF K+ +LF++N ++
Sbjct: 112 RKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRG----VFDAAKEKDLFLYNALLS 167
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+S+++ R+AI LF+++L + + P T P + KA A + G +H +K G
Sbjct: 168 GYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGF 227
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ N +I MY KCG ++ + ++F+
Sbjct: 228 SDAFVGNALIAMYG--------------------------------KCGFVESAVKVFET 255
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREM---QEQNIKPSEFTMVSLLNACAKLGAI 237
M +RN VSWNS++ N F E +F+ + +E+ + P TMV+++ ACA +G +
Sbjct: 256 MRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEV 315
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
R G +H V +++DMY KCG A +F+ K + WN++++G
Sbjct: 316 RMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGY 375
Query: 298 AMNGYENEAIKLFSGLQ-SSNLKPDYISFIAVLTACN 333
+ G +L +Q ++ + ++ + VL AC+
Sbjct: 376 SKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACS 412
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 159/329 (48%), Gaps = 36/329 (10%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+HA +K G D + ++A G + A VF ++ NL WN+++ S++
Sbjct: 217 VHALALKAGGFSDAFVGNALIAM-YGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENG 275
Query: 67 TPRNAILLFIDMLVTSP--IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+F +L++ + P T ++ A A +G R G +HG K G+ +
Sbjct: 276 GFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVT 335
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
++N+++ MY+ CG+L EAR +FD ++ +VV+WN++I G +K G+
Sbjct: 336 VNNSLVDMYSKCGYLGEARALFD-MNGGKNVVSWNTIIWGYSKEGD-------------- 380
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
F+ EL +EMQ E+ ++ +E T++++L AC+ + + I
Sbjct: 381 -----------------FRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEI 423
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H + + F + +V A + Y KC + A +VF + K +S WN+++ A NG+
Sbjct: 424 HGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFP 483
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
+++ LF + S + PD + ++L AC
Sbjct: 484 GKSLDLFLVMMDSGMDPDRFTIGSLLLAC 512
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 6/256 (2%)
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE-M 212
DVV +I + CG +SR +FD ++ +N+++SGY RN F++A+ LF E +
Sbjct: 127 DVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELL 186
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
++ P FT+ + ACA + + GE +H + + V A+I MY KCG
Sbjct: 187 SATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFV 246
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL---QSSNLKPDYISFIAVL 329
E A++VF T+ + L WNS+++ + NG E +F L + L PD + + V+
Sbjct: 247 ESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVI 306
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
AC G+V L + I + + +VD + G L EA L M +
Sbjct: 307 PACAAVGEVRMGMVVHGLAFK-LGITEEVTVNNSLVDMYSKCGYLGEARALF-DMNGGKN 364
Query: 390 AIIWGSLLSACRKHGN 405
+ W +++ K G+
Sbjct: 365 VVSWNTIIWGYSKEGD 380
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/498 (34%), Positives = 290/498 (58%), Gaps = 14/498 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+ H H + G+ D + ++ F + GD++ A + F ++ + N +I G+S+S
Sbjct: 195 QTHCHALVRGMLGDVFVQTALVDF-YAKNGDMDSALMAFKEMPVKDPIPMNCLITGYSKS 253
Query: 66 STPRNAILLFIDMLVTSPIQPQRLT--YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
A LF M P+R + + S+ YA G R+ L +++++G +
Sbjct: 254 GDVEEARRLFDSM-------PRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNA 306
Query: 124 FIHNTIIYMYANCGFLS---EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
T+ + A G L AR E D + +V+ +++ KC IDE+R FD+
Sbjct: 307 ITITTVFSICAKTGDLDTGRRARAWIREEDLQ-NVIVHTALMEMYVKCRAIDEARHEFDR 365
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ V+W++MI+GY +N + E+LELF M+ N KP+E T+V +L+ACA+LG+ G
Sbjct: 366 MPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELG 425
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
E I N++ + L + + +A+IDMY KCG RA VFN + +K + WNSM+ GLA+N
Sbjct: 426 EQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALN 485
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ +AI L+ + ++P+ ++F+A+LTAC H+G V++ +F M + + P ++H
Sbjct: 486 GFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEH 545
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+C+VD L ++G L EA K I M +P+A+IW +LLSACR H ++E+AK AA +++ L+
Sbjct: 546 CACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALE 605
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
N S YVL+SN+YA + + + E R LM+ ++K S IE+DGEVH F+ H
Sbjct: 606 PNNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYH 665
Query: 481 PKAPEVYLLLNDLGLLIQ 498
P++ E+Y +++ LGL ++
Sbjct: 666 PRSAEIYNVVDGLGLQLE 683
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 197/422 (46%), Gaps = 46/422 (10%)
Query: 24 SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSP 83
+R L S A A +F + +P + + G S+ S + I + +
Sbjct: 111 TRPLHALLSNASTYRAARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGG 170
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR 143
P P + K+ AQ + G+Q H + +G+ D F+ ++ YA G + A
Sbjct: 171 AIPSG-CIPLVLKSCAQSAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSAL 229
Query: 144 LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+ F E+ + D + N +I G +K G+++E+RRLFD M R + SWNSMI+ Y +F+
Sbjct: 230 MAFKEMPVK-DPIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFR 288
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
EAL LF +M + P+ T+ ++ + CAK G + G ++ + N IV TA++
Sbjct: 289 EALTLFDQMLREGASPNAITITTVFSICAKTGDLDTGRRARAWIREEDLQ-NVIVHTALM 347
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
+MY KC + A F+ +P++ + W++M+ G + NG +E+++LF ++++N KP+ +
Sbjct: 348 EMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEV 407
Query: 324 SFIAVLTAC-----------------------------------NHSGKVNQAKDYFTLM 348
+ + VL+AC G V +A+ F M
Sbjct: 408 TLVGVLSACAQLGSDELGEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRM 467
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGN 405
+ + ++ M+ L G E+A L R M D P+ + + +LL+AC G
Sbjct: 468 EQKVVVT-----WNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACTHAGL 522
Query: 406 IE 407
++
Sbjct: 523 VD 524
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 171/478 (35%), Positives = 267/478 (55%), Gaps = 34/478 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++ K++H +++K G D S ++A S +G+ LVF ++ N+ W +I
Sbjct: 144 LREGKEVHCNIVKHGFDSDVFVQSSLVAM-YSQSGETLGMELVFGEMVVRNIVSWTAVIA 202
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ Q+ + + +F +M V S QP +T S+ A A L G +HG +K G++
Sbjct: 203 GYVQNRYFKEGLGVFREM-VGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVD 261
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + N +I +Y KCG ++ +R LFD
Sbjct: 262 PDVSLTNALIALYG--------------------------------KCGNVETARSLFDG 289
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
MV +N VSWN+MI+ Y +N A++LFR MQ + + TMVS+++ACA LGA+ G
Sbjct: 290 MVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTG 349
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
W+H + E+N + A+IDMY KCG + A +VF +P + + W SM+ A +
Sbjct: 350 RWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASH 409
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ +A+KLFS ++ +KP+ +F AV TAC HSG V + + +F M Y I P ++H
Sbjct: 410 GHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEH 469
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+CMVD LGRAG L EA + I MP +PD +WG+LL +CR H N+E+A+ A+++ LD
Sbjct: 470 CACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLD 529
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
YVLMSN+YA + ++E+A R LM+E +++K PG SL+EV+ H F++G R
Sbjct: 530 PQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRFHTFLSGSR 587
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 213/411 (51%), Gaps = 39/411 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL--AFCTSPAGDINYAYLVFTQIKKPNLFIWNTI 58
+ DL +IHA ++ G ++ + +++++ A C +P D YA +F Q+ K ++F+WNT+
Sbjct: 42 LPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMD--YARKMFDQMPKRDVFLWNTL 99
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IRG++ + A+ L+ +M + + P T+P + ++ A L R+G ++H +VK G
Sbjct: 100 IRGYADAGPCEEALALYSNMH-GAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHG 158
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ D F+ ++++ MY+ G L+F E
Sbjct: 159 FDSDVFVQSSLVAMYSQSGETLGMELVFGE------------------------------ 188
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
MV RN VSW ++I+GYV+N FKE L +FREM +P+ T+VS+L ACA L +
Sbjct: 189 --MVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLN 246
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+ IH + + + + + A+I +Y KCG E A +F+ + + L WN+M+
Sbjct: 247 LGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYE 306
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
N A+KLF +Q+ + DYI+ ++V++AC G +N + + + + ++ ++
Sbjct: 307 QNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGR-WMHELVKRKGLEINV 365
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ ++D + G ++ A ++ +P + W S++ AC HG+ E A
Sbjct: 366 SITNALIDMYAKCGNIDLAREVFERLPCR-SVVSWTSMIGACASHGHGEDA 415
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/487 (35%), Positives = 276/487 (56%), Gaps = 4/487 (0%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H +K G A+ +L S AG + + F ++ N+ WN++I G++Q+
Sbjct: 67 VHGVALKLGFVGQVFVANALLHSYAS-AGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAG 125
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
R A LF +M + + T SL A +Q G G +H ++ G D +
Sbjct: 126 DTREACALFGEMRRQGFLGDE-FTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILG 184
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
++ MY+ CG L AR F+ + + VV+W SM+ K G +D +R FD M RNT
Sbjct: 185 GALVDMYSKCGDLCMARRCFEMMPIK-SVVSWTSMLCAQTKHGSVDAARCWFDHMPERNT 243
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSWN+MIS YV+ ++ EAL+L+++MQ P E T+V +L+AC ++G + G+ +H +
Sbjct: 244 VSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLY 303
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ N + ++ +++DMY KCG + A+++F + + + WN ++ GLAM+G +A
Sbjct: 304 IRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDA 363
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
I F + N PD I+F+A+L++C+H G + + YF M Y +K ++HY+CMVD
Sbjct: 364 ITFFRSM-VRNTSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVD 422
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR G LE+A LI+ MP PD ++WG+LL ACR HGN+++ KQ KQ++EL+
Sbjct: 423 LLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQLLELEGISGGL 482
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
+VL+SNL + Q+E+ R LMKE K+ G S IE++ +HEF H + E+
Sbjct: 483 FVLISNLLYETNQWEDMKRLRKLMKERGTRKDMGVSSIEINNSIHEFGVEDIRHESSSEI 542
Query: 487 YLLLNDL 493
Y +++ L
Sbjct: 543 YAVVDQL 549
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 200/483 (41%), Gaps = 105/483 (21%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
+F I P+ ++NTI R + S PR A+ L ML + P T P + KA +
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCML-RRGVLPNEFTLPFVVKACTRAQ 59
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ +HG +K G F+ N +++ YA+ G L ++R FDE+ +VV+WNSMI
Sbjct: 60 AWDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGR-NVVSWNSMI 118
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G A+ G+ +EA LF EM+ Q EF
Sbjct: 119 GGYAQAGDT-------------------------------REACALFGEMRRQGFLGDEF 147
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG--CPER------ 274
T+ SLL AC++ G + G +H ++ + ++ I+ A++DMY KCG C R
Sbjct: 148 TLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMM 207
Query: 275 -----------------------ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
A F+ +P++ WN+M+ G +EA+ L+
Sbjct: 208 PIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYK 267
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA 371
+QS PD + + VL+AC G + K + + P I + ++D +
Sbjct: 268 QMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIH-NPDISLINSLLDMYAKC 326
Query: 372 GLLEEAEKLIRSM---------------------------------PSDPDAIIWGSLLS 398
G ++ A +L R M + PD I + +LLS
Sbjct: 327 GQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMVRNTSPDGITFVALLS 386
Query: 399 ACRKHGNIEMAK---QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
+C G +E + ++ + + + K+E Y M +L E+A+ L+KE+ +
Sbjct: 387 SCSHGGLLETGQHYFESMRHVYNV-KHEVEHYACMVDLLGRRGHLEKAV---CLIKEMPM 442
Query: 456 EKE 458
+ +
Sbjct: 443 KPD 445
>gi|357473845|ref|XP_003607207.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508262|gb|AES89404.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 183/517 (35%), Positives = 288/517 (55%), Gaps = 51/517 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKD-PIAASRILAFCTSPAGDINYAYLVF--TQIKKPNLFIWNT 57
+ +LK++ A + K+GL P+ I SP G++++AY +F + I N FI NT
Sbjct: 19 ISELKQLQAIITKSGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSILIHNPFISNT 78
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQ---RLTYPSLFKAYAQL---GLARD----- 106
+IR FS S P A+L++ ML+ + + + +AY + G D
Sbjct: 79 MIRAFSHSCFPLQALLIYNQMLINNVVSDSYTCNFVLKACSRAYKLIQESGSCDDDNLVV 138
Query: 107 ----GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV-DTEF-------- 153
G ++H RV+K G + D + N+++Y Y+ CG +S AR +FD++ DT
Sbjct: 139 VYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARHLFDQIKDTSLVSWNIMIS 198
Query: 154 ---------------------DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
VV+WN++I + G++ +RR+F M RN VSWNSM
Sbjct: 199 AYDLVNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSM 258
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
I+G V + ALELF EMQ +KP+E T++S+L ACA+ GA+ G I+ L
Sbjct: 259 IAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESLKVCEH 318
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
++ + + A+++MYCKCG A ++FN + K +SCWN+MV GLA++GY E +LF+
Sbjct: 319 KIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTE 378
Query: 313 LQSS---NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
++ S +++PD ++FI VL AC+H G V++A+ YF M + YKI P KHY CMVD L
Sbjct: 379 MEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLS 438
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVL 429
R GLLEEA ++I + P ++W +LL ACR N E+A+ + KQ+ +L + YVL
Sbjct: 439 RWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAKLKQLIDGDYVL 498
Query: 430 MSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
+SN+YA + +++E R M + + ++ G S I +
Sbjct: 499 LSNIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQINM 535
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 174/498 (34%), Positives = 281/498 (56%), Gaps = 4/498 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H +I+ DP AS ++ + G A VF+ ++ N W +I GF Q
Sbjct: 311 KQLHVQVIRNLPHIDPYVASAMVEL-YAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQ 369
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ LF + + + + +L G+QLH +K G
Sbjct: 370 YGCFSESVELF-NQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVV 428
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I MYA CG L A L+F+ + E D+V+W MI ++ G I ++R FD M +R
Sbjct: 429 VSNSLISMYAKCGNLQNAELIFNFM-AERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR 487
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N ++WN+M+ Y+++ ++ L+++ +M E+++ P T V+L CA +GA + G+ I
Sbjct: 488 NVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQI 547
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
V L+T VV A+I MY KCG A + F+ + +K L WN+M+ G + +G
Sbjct: 548 IGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMG 607
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+AI++F + + KPDYIS++AVL+ C+HSG V + K YF +M + I P ++H+SC
Sbjct: 608 KQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSC 667
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG L EA+ LI MP P A +WG+LLSAC+ HGN ++A+ AAK + +LD
Sbjct: 668 MVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPG 727
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S GY+L++ +YA + + +++ + R LM++ I+K PG S +EV+ VH F A HP+
Sbjct: 728 SGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQV 787
Query: 484 PEVYLLLNDLGLLIQEMG 501
+ L++L I +G
Sbjct: 788 IAIREKLDELMEKIAHLG 805
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 192/377 (50%), Gaps = 3/377 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A +F ++ ++ WNTI+ G+ QS NA+ +F+ M T P T+ +
Sbjct: 106 GSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCV 165
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
K+ LG QL G + K + D + ++ M CG + A F +
Sbjct: 166 MKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNP-T 224
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
++ NSM++G AK +D + +F M R+ VSWN +IS ++ + +EAL++ +M
Sbjct: 225 IICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHG 284
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+ ++P T S L ACA+L ++ G+ +H ++ N ++ V +A++++Y KCGC +
Sbjct: 285 KGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKE 344
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A +VF+++ + W ++ G G +E+++LF+ +++ + D + +++ C +
Sbjct: 345 AKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCN 404
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+ + +L ++ + + S ++ + G L+ AE LI + ++ D + W
Sbjct: 405 TMDICLGSQLHSLCLKSGHTRAVVVSNS-LISMYAKCGNLQNAE-LIFNFMAERDIVSWT 462
Query: 395 SLLSACRKHGNIEMAKQ 411
+++A + GNI A++
Sbjct: 463 GMITAYSQVGNIAKARE 479
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 178/358 (49%), Gaps = 45/358 (12%)
Query: 104 ARDGAQ-LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR-LMFDEVDTEFDVVAWNSM 161
A GA+ LH R++ GL F+ NT+++ Y +CG LS+AR L+ DE+ TE +V+ N M
Sbjct: 40 ALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI-TEPNVITHNIM 98
Query: 162 IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPS 220
+ G AK G + ++ LF +M +R+ SWN+++SGY ++ +F AL++F M Q + P+
Sbjct: 99 MNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPN 158
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC--------- 271
FT ++ +C LG + L + + V TA++DM +CG
Sbjct: 159 AFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFS 218
Query: 272 ----------------------PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
+ AL++F ++P++ + WN ++ L+ +G EA+ +
Sbjct: 219 RIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDM 278
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDA 367
+ ++PD ++ + LTAC + K L + + P I Y S MV+
Sbjct: 279 VVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQ---LHVQVIRNLPHIDPYVASAMVEL 335
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG----NIEMAKQAAKQIIELDK 421
+ G +EA+++ S+ D +++ W L+ ++G ++E+ Q +++ +D+
Sbjct: 336 YAKCGCFKEAKRVFSSL-RDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQ 392
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 257/430 (59%), Gaps = 6/430 (1%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL--GLARDGAQLHG 112
W + I +++ A F DM + ++P +T+ +L G G LHG
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAG-VEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 113 RVVKQGLEFDQFIHNT-IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
K GL+ + + T II MY+ G +ARL+FD ++ + + V WN+MI G + G++
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK-NSVTWNTMIDGYMRSGQV 156
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
D + ++FDKM R+ +SW +MI+G+V+ +EAL FREMQ +KP +++ LNAC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
LGA+ G W+H ++++ F+ N V ++ID+YC+CGC E A QVF + K+ + WN
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
S++ G A NG +E++ F +Q KPD ++F LTAC+H G V + YF +M
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAK 410
Y+I P I+HY C+VD RAG LE+A KL++SMP P+ ++ GSLL+AC HG NI +A+
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAE 396
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
+ K + +L+ YV++SN+YAA ++E A + R MK + ++K+PG S IE+D +
Sbjct: 397 RLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCM 456
Query: 471 HEFVAGGRLH 480
H F+AG H
Sbjct: 457 HVFMAGDNAH 466
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 44/265 (16%)
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL--GA 236
++ S TVSW S I+ RN + EA + F +M ++P+ T ++LL+ C G+
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 237 IRQGEWIHNFLVTNCFELNTIVV-TAIIDMYCK--------------------------- 268
G+ +H + + N ++V TAII MY K
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 269 ----CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
G + A ++F+ +P++ L W +M+ G GY+ EA+ F +Q S +KPDY++
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETY----KIKPSIKHYSCMVDALGRAGLLEEAEKL 380
IA L AC + G ++ F L Y K +++ + ++D R G +E A ++
Sbjct: 209 IIAALNACTNLGALS-----FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGN 405
+M + W S++ +GN
Sbjct: 264 FYNMEKRT-VVSWNSVIVGFAANGN 287
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 125/312 (40%), Gaps = 67/312 (21%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL ++ + + S G A LVF ++ N WNT+I G+ +S
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
NA +F M + S ++P + +
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A LG G +H V+ Q + + + N++I +Y CG + AR +F ++ VV
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR-TVV 273
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G ES L FR+MQE+
Sbjct: 274 SWNSVIVGFAANGNAHES-------------------------------LVYFRKMQEKG 302
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC-FELNTIV--VTAIIDMYCKCGCPE 273
KP T L AC+ +G + +G + F + C + ++ + ++D+Y + G E
Sbjct: 303 FKPDAVTFTGALTACSHVGLVEEG--LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLE 360
Query: 274 RALQVFNTVPKK 285
AL++ ++P K
Sbjct: 361 DALKLVQSMPMK 372
>gi|147833682|emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
Length = 583
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 282/476 (59%), Gaps = 45/476 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDP---IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
M LK++HA I+T + P SRIL F S D+ YA+ VF QI+ PN F+WN
Sbjct: 39 MSQLKQLHAQTIRTTSSHHPNTFFLYSRILHF--SSLHDLRYAFRVFHQIENPNSFMWNA 96
Query: 58 IIRGFSQSSTPR-NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR ++S+ + +AI L+ ML + + T+P + KA A L +G Q+H +++K
Sbjct: 97 LIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHAQILK 156
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G + B +I+N++++ YA C +D ++
Sbjct: 157 LGFDSBVYINNSLVHFYAT--------------------------------CDRLDFAKG 184
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M R+ VSWN +I +VR +F AL LF EMQ + +P +T+ S+ NACA +G+
Sbjct: 185 VFDRMSERSLVSWNVVIDAFVRFGEFDAALNLFGEMQ-KFFEPDGYTIQSIANACAGMGS 243
Query: 237 IRQGEWIHNFLV--TNCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ G W H FL+ + +N +++ T+++DMYCKCG E ALQ+F+ +PK+ ++ WNSM
Sbjct: 244 LSLGMWAHVFLLKKXDADRVNDVLLNTSLVDMYCKCGSLELALQLFHRMPKRDVTSWNSM 303
Query: 294 VFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
+ G + +G A++ F + ++ L P+ I+F+ VL+ACNH G V++ + YF +M Y
Sbjct: 304 ILGFSTHGEVAAALEYFGCMVRTEKLMPNAITFVGVLSACNHGGLVSEGRRYFDVMVTEY 363
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA-CRKHGNIEMAKQ 411
KIKP ++HY C+VD L RAGL++EA ++ +MP PD +IW SLL A C+++ +E++++
Sbjct: 364 KIKPELEHYGCLVDLLARAGLIDEALDVVSNMPMRPDLVIWRSLLDACCKQNAGVELSEE 423
Query: 412 AAKQIIELDKNESCG-YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
A +++E + G YVL+S +YA++ ++ + R LM + + KEPGCS IE+
Sbjct: 424 MASRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMVRKLMTDKGVVKEPGCSSIEI 479
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 166/459 (36%), Positives = 263/459 (57%), Gaps = 43/459 (9%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G I A +F +I ++ WN +I G++++ + A+ LF +M+ T+ ++P T S+
Sbjct: 168 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN-VRPDESTMVSV 226
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A AQ G Q+H + G + I N +I +Y
Sbjct: 227 VSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYI-------------------- 266
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
KCGE++ + LF+ + ++ +SWN++I GY +KEAL LF+EM
Sbjct: 267 ------------KCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 314
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL------VTNCFELNTIVVTAIIDMYCK 268
P++ TM+S+L ACA LGAI G WIH ++ V N T ++IDMY K
Sbjct: 315 SGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRT----SLIDMYAK 370
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG E A QVF+++ + LS WN+M+FG AM+G N A +FS ++ + ++PD I+F+ +
Sbjct: 371 CGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGL 430
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC+HSG ++ + F M E YKI P ++HY CM+D LG +GL +EAE++I +M +P
Sbjct: 431 LSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEP 490
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D +IW SLL AC+ HGN+E+ + A+ +I+++ YVL+SN+YA + ++ E + R
Sbjct: 491 DGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRA 550
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
L+ + ++K PGCS IE+D VHEF+ G + HP+ E+Y
Sbjct: 551 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 589
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 33/254 (12%)
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+ + N + WN+M G+ + AL L+ M + P+ +T LL +CAK A
Sbjct: 44 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 103
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT--------------- 281
R+G+ IH ++ ++L+ V T++I MY + G E A +VF+
Sbjct: 104 FREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITG 163
Query: 282 ----------------VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
+P K + WN+M+ G A G EA++LF + +N++PD +
Sbjct: 164 YASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTM 223
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
++V++AC S + + + + + + ++K + ++D + G +E A L +
Sbjct: 224 VSVVSACAQSASIELGRQVHSWI-DDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGL- 281
Query: 386 SDPDAIIWGSLLSA 399
S D I W +L+
Sbjct: 282 SYKDVISWNTLIGG 295
>gi|224141025|ref|XP_002323875.1| predicted protein [Populus trichocarpa]
gi|222866877|gb|EEF04008.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 261/428 (60%), Gaps = 11/428 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M LK+IHAH + GL I +++L F SP+GD+ YA +F Q+ PN F +NT+I
Sbjct: 8 MSRLKQIHAHSLLAGLHDHSIILAKMLRFAAVSPSGDLAYAQRLFDQLPHPNTFFYNTLI 67
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQ--------LGLARDGAQLH 111
RG+++SS P ++ L ++ + + + P T+ L KA ++ L L + ++H
Sbjct: 68 RGYAKSSIPSYSLHL-VNQMRQNGVDPDEFTFNFLIKARSRVRVNINRNLPLVVECDEIH 126
Query: 112 GRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
G V+K G F+ N +I++YA G A +FDE DVV+W+ +++ + GE+
Sbjct: 127 GAVLKLGFSSHLFVRNALIHLYAARGNPVVAWRVFDET-VGVDVVSWSGLVLAHVRAGEL 185
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
+ +R +FD+M R+ VSW +M+S Y + +EALEL+ M ++ ++P E T+VS+++AC
Sbjct: 186 ERARWVFDQMPERDVVSWTTMVSAYSQAKYSREALELYVTMLDKGVRPDEVTLVSVISAC 245
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
LG ++ G +H+++ N F + A+IDMY KCGC +RA QVFN++ +K L WN
Sbjct: 246 TNLGDLQMGYSVHSYIDENGFRWMVSLCNALIDMYAKCGCMDRAWQVFNSMSRKSLVTWN 305
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
SM+ A N +A LFS + + + PD ++F+AVLTA H G V++ F M
Sbjct: 306 SMISACANNRNPEDAFGLFSRMFNYGVAPDGVTFLAVLTAYAHVGLVDEGYRLFESMQRD 365
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ I+ I+HY C+V+ LG+AG LEEA +LI SMP + ++WG LL+ACRKHG++ M ++
Sbjct: 366 HGIEARIEHYGCVVNMLGQAGWLEEAFELITSMPLPSNDVVWGVLLAACRKHGDVYMGER 425
Query: 412 AAKQIIEL 419
K+++EL
Sbjct: 426 VVKKLLEL 433
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/466 (37%), Positives = 280/466 (60%), Gaps = 5/466 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K HA +KTG D AS ++ T G + A +F ++ L +WN +IR + +
Sbjct: 66 RKAHAAAMKTGFWWDAYTASSLMDMYT-LLGRADVARKLFDEMPHRALVVWNMMIRCYVR 124
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
AI L +M S + P ++T + ++ G G ++H + F
Sbjct: 125 CGRYTAAIALAEEM-ERSGLTPDKVTLVTSVTVCSRAGDLSLGRRIHA-YMDGVFGFSLP 182
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MY G L EA +F+++ + ++++W ++ G A G++D++R LF + +
Sbjct: 183 VANALLDMYMKNGCLEEAVKLFEQMPSR-NIISWTILVSGYAFAGQLDKARVLFYQCSEK 241
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ + W +MI+ V++ F+EAL LFREMQ Q ++P FT+V+LL CA LGA+ QGEWIH
Sbjct: 242 DLIMWTAMINACVQHGCFEEALSLFREMQMQRVEPDRFTIVTLLTCCANLGALDQGEWIH 301
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
F V +++ ++ TA+IDMY KCG +++++VF + + + W S++ GLA NG
Sbjct: 302 QFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVFEQMQGRDTTAWTSIICGLATNGQAG 361
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A++LF ++ S +KPD I+FI VL+AC H G V++ + F M + Y+I P I+HYSC+
Sbjct: 362 RALELFEDMERSKVKPDSITFIGVLSACCHGGLVDEGRKQFHAMKDVYRIPPRIEHYSCL 421
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAI-IWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
V+ LGRAGLL+EAEKLIR + + DA+ ++G+LL+AC+ GN+EM+++ K+I E
Sbjct: 422 VNLLGRAGLLDEAEKLIRDIQINKDAMPLFGALLTACKAQGNVEMSERLTKRIGEQGYQI 481
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGE 469
+LMSN+YA + ++E+A+ R M I+K GCSLIEV G
Sbjct: 482 PDVNLLMSNVYATASRWEDAIRVRSKMAHPTIKKTAGCSLIEVKGH 527
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
N +I R F + ++ +++ + + FT +L A L +G H +
Sbjct: 15 NLLIRTLARRGSFARVMAVYYDLRGRGLVADSFTYPFVLRAIGVLKLSVEGRKAHAAAMK 74
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
F + ++++DMY G + A ++F+ +P + L WN M+ G AI L
Sbjct: 75 TGFWWDAYTASSLMDMYTLLGRADVARKLFDEMPHRALVVWNMMIRCYVRCGRYTAAIAL 134
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
++ S L PD ++ + +T C+ +G ++ + M + S+ + ++D
Sbjct: 135 AEEMERSGLTPDKVTLVTSVTVCSRAGDLSLGRRIHAYMDGVFGF--SLPVANALLDMYM 192
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVL 429
+ G LEEA KL MPS + I W L+S G ++ A+ Q E D ++
Sbjct: 193 KNGCLEEAVKLFEQMPSR-NIISWTILVSGYAFAGQLDKARVLFYQCSEKD------LIM 245
Query: 430 MSNLYAASYQ---FEEAMEERLLMKEVKIEK-EP 459
+ + A Q FEEA+ L +E+++++ EP
Sbjct: 246 WTAMINACVQHGCFEEALS---LFREMQMQRVEP 276
>gi|297737809|emb|CBI27010.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 270/469 (57%), Gaps = 20/469 (4%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
+ YA +F QI PN+ +WN++ RG++QS + R +F +M + + + S+
Sbjct: 1 MTYARQLFDQIPDPNIALWNSMFRGYAQSESYRE---IFCEMF-----ERNVVAWTSMIN 52
Query: 97 AY---AQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
Y A L AR R+ E D + N ++ Y G + EAR +F E+
Sbjct: 53 GYILSADLVSAR-------RLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNR- 104
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM- 212
DV+ WN+++ G A G ++ LF++M RN SWN++I GY N F E L F+ M
Sbjct: 105 DVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRML 164
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
E ++ P++ T+V++L+ACA+LGA+ G+W+H + ++ + N V A++DMY KCG
Sbjct: 165 SESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGII 224
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
E A+ VF + K L WN+++ GLAM+ +A+ LF ++++ KPD I+FI +L AC
Sbjct: 225 ENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCAC 284
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H G V YF M + Y I P I+HY CMVD L RAG LE+A +R MP + D +I
Sbjct: 285 THMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVI 344
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
W LL ACR + N+E+A+ A +++IEL+ YV++SN+Y + ++E+ ++ M++
Sbjct: 345 WAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRD 404
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+K PGCSLIEV+ V EF + HP+ E+Y +L L +++ G
Sbjct: 405 TGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFG 453
>gi|242082594|ref|XP_002441722.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
gi|241942415|gb|EES15560.1| hypothetical protein SORBIDRAFT_08g001305 [Sorghum bicolor]
Length = 528
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 175/487 (35%), Positives = 273/487 (56%), Gaps = 2/487 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++L++IHA I GL + S + C + G + A +F +I P+L + +++
Sbjct: 27 LRELQRIHALAIAHGLHPHQQSVSCKIFRCYADFGRVADARKLFDEIPNPDLISFTSLMS 86
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
Q R AI LF +V + +P A + G G +HG + + GL+
Sbjct: 87 LHLQLDNQREAISLFA-RVVAAGHRPDGFAVVGALSASSGAGDQVVGRAVHGLIFRLGLD 145
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ + N +I MY+ CG A +FD + + D V W SM+ G KC +D + FD+
Sbjct: 146 GEVVVGNALIDMYSQCGKFESAVKVFDRMSLK-DEVTWGSMLHGYIKCAGVDSALSFFDQ 204
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ R+ V+W ++I+G+V+ + ALELF M + +P+ T+V +L+ACA +GA+ G
Sbjct: 205 VPVRSVVAWTALITGHVQGRQPVRALELFGRMVLEGHRPTHVTIVGVLSACADIGALDLG 264
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
IH + LN IV A++DMY K G E A VF V K W +M+ +
Sbjct: 265 RVIHGYGSKCNASLNIIVSNALMDMYAKSGHIEMAFSVFQEVQSKDSFTWTTMISCCTVQ 324
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G +A++LF + + + P+ ++F++VL+AC+HSG + + + F M + YKI P ++H
Sbjct: 325 GDGKKALELFQDMLRAGVVPNSVTFVSVLSACSHSGLIEEGIELFDRMRQLYKIDPLLEH 384
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CM+D LGR GLLEEAE LI M +PD +IW SLLSAC GN +A+ A K+I++ +
Sbjct: 385 YGCMIDLLGRGGLLEEAEALIADMNVEPDIVIWRSLLSACLVRGNNRLAEIAGKEIVKRE 444
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ YVL+ N+YA+S ++ EA E R M +KI K+PGCS IE+DG VHEF+ + H
Sbjct: 445 PGDDGVYVLLWNMYASSNKWREAREMRQQMLSLKIFKKPGCSWIEIDGAVHEFLVEDKTH 504
Query: 481 PKAPEVY 487
E+Y
Sbjct: 505 DARREIY 511
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 277/464 (59%), Gaps = 3/464 (0%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K+ +++H+H+IK G D I S L + GD+ A +F ++ ++ WN++I G
Sbjct: 427 KEGEQMHSHVIKLGFLLD-IFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGG 485
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+SQ + + + LF +++ +Q ++T + A LG + + + +E
Sbjct: 486 YSQRNRFKEVLALF-ELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEV 544
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D ++ NT+I Y G L A +F ++ + + V N+MI AK G + ++++FD++
Sbjct: 545 DVYLGNTLIDYYCRIGQLQSAEKVFSQMKDK-NTVTLNAMIHAYAKGGNLVSAKKIFDQI 603
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+++ +SW+SMI Y + F ++LELFR+MQ +KP + S+L+ACA LGA+ G+
Sbjct: 604 PNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGK 663
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
WIH+++ N + +TI+ ++IDM+ KCGC + ALQVF + +K WNS++ GLA NG
Sbjct: 664 WIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNG 723
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+E+EA+ +F + + +P+ ++F+ VL AC + V + D+F M + ++P +KHY
Sbjct: 724 FEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHY 783
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
C+V L RAG LE+A+ I MP PD ++W LL AC+ HGN+ +A+ A K++ ELD
Sbjct: 784 GCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVATKKLSELDP 843
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 465
+ S Y+L+SN+YA++ ++ +A+ R M + + K P CS+++
Sbjct: 844 SNSGDYMLLSNIYASADRWSDALNVRQWMADTAVRKSPACSVVD 887
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 192/312 (61%), Gaps = 1/312 (0%)
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+VV+WN +I G A GEI+ +R LFD+M RN VSW +I GY R + EA+ LFR M
Sbjct: 5 NVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMM 64
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
I PSE T+++++ A + LG I GE +H + V + V ++ID+Y K G +
Sbjct: 65 AGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQ 124
Query: 274 RALQVFN-TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
+L+VF+ + ++ L W S++ G AM+G EA++LF+ ++ + ++P+ I+F++V+ AC
Sbjct: 125 NSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINAC 184
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+H G V Q +F M Y I P IKH+ C++D LGRAG L EAE++I +P + + I+
Sbjct: 185 SHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIV 244
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
W LL C K+G +EM K+A K I +L++ + ++SN+ +F +A + R L+ E
Sbjct: 245 WRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDE 304
Query: 453 VKIEKEPGCSLI 464
KI K PG +L+
Sbjct: 305 RKIVKVPGLALV 316
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 214/438 (48%), Gaps = 72/438 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M+ +KK+HAHL+ +GL A S+++ D+ +A+ VF QI+ P F+WNT++R
Sbjct: 324 MEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLR 383
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G +QS P++AI +F ++P +T+P + KA A+ ++G Q+H V+K G
Sbjct: 384 GLAQSDAPKDAI-VFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFL 442
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ N++I++YA CG L AR +FDE+ + DVV+WNS
Sbjct: 443 LDIFVSNSLIHLYAACGDLVCARSIFDEMLVK-DVVSWNS-------------------- 481
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+I GY + +FKE L LF MQ + ++ + TMV +++AC LG
Sbjct: 482 -----------LIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMA 530
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF------NTV------------ 282
+ + ++ N E++ + +ID YC+ G + A +VF NTV
Sbjct: 531 DCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKG 590
Query: 283 -------------PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
P K L W+SM+ + + +++++LF +Q + +KPD + +VL
Sbjct: 591 GNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVL 650
Query: 330 TACNHSGKVNQAK---DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+AC H G ++ K DY IK + ++D + G ++EA ++ M
Sbjct: 651 SACAHLGALDLGKWIHDY----VRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEM-E 705
Query: 387 DPDAIIWGSLLSACRKHG 404
+ D + W S++ +G
Sbjct: 706 EKDTLSWNSIILGLANNG 723
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 165/350 (47%), Gaps = 36/350 (10%)
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
+LH +V GL Q+ + +I YA L ++ L+F
Sbjct: 329 KLHAHLVVSGLHNCQYAMSKVIRSYA----LQQSDLVF---------------------- 362
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
+ ++F+++ S T WN+++ G ++ K+A+ +++ QE+ +KP T +L
Sbjct: 363 -----AHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVL 417
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
ACAK A ++GE +H+ ++ F L+ V ++I +Y CG A +F+ + K +
Sbjct: 418 KACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVV 477
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WNS++ G + E + LF +Q+ ++ D ++ + V++AC H G + A D
Sbjct: 478 SWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMA-DCMVRY 536
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
E I+ + + ++D R G L+ AEK+ M D + + +++ A K GN+
Sbjct: 537 IERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQM-KDKNTVTLNAMIHAYAKGGNLVS 595
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
AK+ QI D + M Y+ + F +++E M+ K++ +
Sbjct: 596 AKKIFDQIPNKDL---ISWSSMICAYSQASHFSDSLELFRQMQRAKVKPD 642
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 145/329 (44%), Gaps = 47/329 (14%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G+I YA L+F Q+ N+ W +I G++++ A+ LF M+ I P +T ++
Sbjct: 20 GEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMM-AGGISPSEITVLAV 78
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A + LG G LHG VK+G+ D + N++I +YA G + + +FDE+ +
Sbjct: 79 VPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRN 138
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+V+W S+I G A G EALELF EM+
Sbjct: 139 LVSWTSIISGFAMHG-------------------------------LSVEALELFAEMRR 167
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV----VTAIIDMYCKCG 270
I+P+ T +S++NAC+ G + QG F + +E N IIDM + G
Sbjct: 168 AGIRPNRITFLSVINACSHGGLVEQG---LAFFKSMVYEYNIDPEIKHFGCIIDMLGRAG 224
Query: 271 CPERALQVFNTVP-KKGLSCWNSMVFGLAMNG---YENEAIKLFSGLQSSNLKPDYISFI 326
A Q+ +P + + W ++ + G AIK+ S L+ + D+
Sbjct: 225 RLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERES-GGDFAVLS 283
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIK 355
VL N G+ + A+ L+ E +K
Sbjct: 284 NVL---NELGRFSDAEQARKLLDERKIVK 309
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 289/503 (57%), Gaps = 11/503 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+KIHA ++ G D + A+ ++ G + A VF ++KK ++ WN +I +
Sbjct: 227 RKIHAEIVANGFDTDLVVATALINM-YGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVL 285
Query: 65 SSTPRNAILLF--IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ A+ L+ +DM + + T+ S+ A + + G +H ++++GL+ +
Sbjct: 286 NGDFHEALELYQKLDM---EGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSE 342
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG---EIDESRRLFD 179
+ ++ MYA CG L EAR +F+ + D VAW+++I A G + ++R++FD
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGAYASNGYGKDARKARKVFD 401
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIR 238
++ SR+T+SWN+MI+ YV+N A+++FREM +KP T +++L ACA LG +
Sbjct: 402 RLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLS 461
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+ + +H + + E N +V +I+MY +CG E A ++F +K + W +MV +
Sbjct: 462 EVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFS 521
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
G EA+ LF + +KPD +++ ++L C H G + Q YFT M E + + P+
Sbjct: 522 QYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTA 581
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
H++ MVD LGR+G L +A++L+ SMP +PD + W + L+ACR HG +E+ + AA+++ E
Sbjct: 582 DHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYE 641
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD + + Y+ MSN+YAA +E+ R M+E ++K PG S IEVDG++HEF +GG+
Sbjct: 642 LDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGK 701
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
HP+ E+ L L L++ G
Sbjct: 702 YHPRTDEICEELTRLHGLMRAAG 724
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 216/425 (50%), Gaps = 21/425 (4%)
Query: 19 DPIAASRILAFCTSPAGDINYAYLVFTQIK----KPNLFIWNTIIRGFSQSSTPRNAILL 74
D + +L C+S GD+ + +I+ + + + N +I + + + +A +
Sbjct: 6 DNVTFLTVLCSCSS-CGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 75 FIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYA 134
F M Q +++ ++ AYAQ G + + L+ R+ QGL D H T + +
Sbjct: 65 FESM---DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTD---HVTFVSVLG 118
Query: 135 NCGFLSEARLMFDEV-----DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 189
C L++ R + + V D+ F +A N+++ A+ G + +++R+F + +R+ SW
Sbjct: 119 ACSSLAQGREIHNRVFYSGLDS-FQSLA-NALVTMYARFGSVGDAKRMFQSLQTRDETSW 176
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
N++I + ++ + AL +F+EM+ ++KP+ T +++++ + + +G IH +V
Sbjct: 177 NAVILAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA 235
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
N F+ + +V TA+I+MY KCG A +VF+ + K+ + WN M+ +NG +EA++L
Sbjct: 236 NGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALEL 295
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
+ L K +F+++L AC+ + Q + + + E + + + +V+
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER-GLDSEVAVATALVNMYA 354
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVL 429
+ G LEEA K+ +M + DA+ W +L+ A +G + A++A K L ++ +
Sbjct: 355 KCGSLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNA 413
Query: 430 MSNLY 434
M Y
Sbjct: 414 MITTY 418
>gi|226531155|ref|NP_001148193.1| methyltransferase small domain [Zea mays]
gi|195616632|gb|ACG30146.1| methyltransferase small domain [Zea mays]
Length = 656
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 257/430 (59%), Gaps = 3/430 (0%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
I+ A VF +I + + W T+I G+ + +A+ ++ M+ + L K
Sbjct: 226 IDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMK 285
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A+ +G QLH ++K G + F+ T+++ Y CG + A++ F D
Sbjct: 286 ACARYSAVTEGQQLHTVILKNGFDALAFVQATLVHFYGCCGLIGLAQMTFRLSDKSH-TA 344
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WN+++ L + G I E+R LFD M R+TVSW++MISGYV+ + AL+LF M +
Sbjct: 345 SWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTS 404
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
I+P+E T+ S L+A A G + QG+WIH++++ +L + + +IDMY KCG A+
Sbjct: 405 IEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAV 464
Query: 277 QVFNTVPKK--GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
Q FN V K +S WN+M+ LA++GY + ++ LFS LQ +++KP+ I+FI VL+AC H
Sbjct: 465 QFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCH 524
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+G V + K YF MT Y I+P+IKHY CMVD LGRAG LEEAE+L+ MP PD +IWG
Sbjct: 525 AGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWG 584
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
S+LSA R GN+ + ++AA+++ +LD+ + +SN+YA + + R +++
Sbjct: 585 SILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWTNVSVVRKELQDAN 644
Query: 455 IEKEPGCSLI 464
+E+ G S I
Sbjct: 645 LERLTGRSGI 654
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 196/430 (45%), Gaps = 45/430 (10%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIKK--PNLFIWNTIIRGFSQSSTPRNAILLF 75
+D A + ILA T AG ++ A + ++ + + + T++ F+++ A+ +F
Sbjct: 74 RDATARNSILAALTR-AGHLDRAQGLLEEMPRIHRDAVSYTTLVTAFARAGHAARAVAVF 132
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
ML + + P T A+A+ G +HG +++ L+ + +++ YA
Sbjct: 133 RSML-SENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAG 191
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
L AR +FD + T + V WN M+ G K ID + +F ++ R+ VSW ++I G
Sbjct: 192 VLELCSARALFDGM-THRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDG 250
Query: 196 YVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFEL 254
Y+ +A++ + +M E E +V L+ ACA+ A+ +G+ +H ++ N F+
Sbjct: 251 YICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDA 310
Query: 255 NTIVVTAIIDMYCKC-------------------------------GCPERALQVFNTVP 283
V ++ Y C G A ++F+ +P
Sbjct: 311 LAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMP 370
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK- 342
++ W++M+ G G + A+KLF + +++++P+ ++ + L+A SG ++Q K
Sbjct: 371 ERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKW 430
Query: 343 --DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII-WGSLLSA 399
DY +M ++ ++ S ++D + G + +A + + ++ W +++ +
Sbjct: 431 IHDY--IMNRPVQLTDNLS--SGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICS 486
Query: 400 CRKHGNIEMA 409
HG M+
Sbjct: 487 LAIHGYAHMS 496
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 160/385 (41%), Gaps = 68/385 (17%)
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQFIHNTIIYMYANC-GFLSEARLMFDEV 149
P L + + R G QLH K GL + F+ N+++ Y+ L+ A +FDE
Sbjct: 10 PFLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDET 69
Query: 150 DTEF-DVVAWNSMIIGLAKCGEIDESRRLFDKM--VSRNTVSWNSMISGYVRNVKFKEAL 206
D A NS++ L + G +D ++ L ++M + R+ VS+ ++++ + R A+
Sbjct: 70 PPPLRDATARNSILAALTRAGHLDRAQGLLEEMPRIHRDAVSYTTLVTAFARAGHAARAV 129
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
+FR M +N+ P+E T+ + A A+ GA IH F + + IV T ++ Y
Sbjct: 130 AVFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAY 189
Query: 267 CKC--GCPERAL-----------------------------QVFNTVPKKGLSCWNSMVF 295
C RAL +VF +P++ W +++
Sbjct: 190 AGVLELCSARALFDGMTHRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLID 249
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDY-ISFIAVLTACNHSGKVNQAKDYFTLMTE---- 350
G ++A+K + + DY + + ++ AC V + + T++ +
Sbjct: 250 GYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFD 309
Query: 351 ------------------------TYKI--KPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
T+++ K ++ ++ AL R GL+ EA +L M
Sbjct: 310 ALAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDM 369
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMA 409
P + D + W +++S + G +MA
Sbjct: 370 P-ERDTVSWSTMISGYVQTGRSDMA 393
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 271/462 (58%), Gaps = 10/462 (2%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A F + ++ WNTII G++QS A LF + SP+Q T+ ++ Y
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDV-FTWTAMVSGYI 292
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
Q + + +L ++ E ++ N ++ Y + A+ +FD + +V WN
Sbjct: 293 QNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWN 347
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
+MI G A+CG+I E++ LFDKM R+ VSW +MI+GY ++ EAL LF +M+ + +
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
+ + S L+ CA + A+ G+ +H LV +E V A++ MYCKCG E A +F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+ K + WN+M+ G + +G+ A++ F ++ LKPD + +AVL+AC+H+G V+
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ + YF MT+ Y + P+ +HY+CMVD LGRAGLLE+A L+++MP +PDA IWG+LL A
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Query: 400 CRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP 459
R HGN E+A+ AA +I ++ S YVL+SNLYA+S ++ + + R+ M++ ++K P
Sbjct: 588 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 647
Query: 460 GCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G S IE+ + H F G HP+ E++ L +L L +++ G
Sbjct: 648 GYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAG 689
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 228/542 (42%), Gaps = 112/542 (20%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYP 92
G+ A +F ++ + +L WN +I+G+ ++ A LF I P+R ++
Sbjct: 109 GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF-------EIMPERDVCSWN 161
Query: 93 SLFKAYAQLGLARDGAQLHGRV-----VKQGLEFDQFIHNTII--------------YMY 133
++ YAQ G D + R+ V ++ N+ + +
Sbjct: 162 TMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS 221
Query: 134 ANC---GFLS-----EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
NC GF+ EAR FD ++ DVV+WN++I G A+ G+IDE+R+LFD+ ++
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
+W +M+SGY++N +EA ELF +M E+N ++ A L QGE +
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERN----------EVSWNAMLAGYVQGERMEM 330
Query: 246 ----FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
F V C ++T +I Y +CG A +F+ +PK+ W +M+ G + +G
Sbjct: 331 AKELFDVMPCRNVSTW--NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG 388
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACN---------------------------- 333
+ EA++LF ++ + + SF + L+ C
Sbjct: 389 HSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN 448
Query: 334 -------HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
G + +A D F M I ++ M+ R G E A + SM
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMA-----GKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 387 D---PDAIIWGSLLSACRKHGNIEMAKQ---AAKQIIELDKNESCGYVLMSNLYAASYQF 440
+ PD ++LSAC G ++ +Q Q + N S Y M +L +
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN-SQHYACMVDLLGRAGLL 562
Query: 441 EEAMEERLLMKEVKIEKEP-------GCSLIEVDGEVHEFVAGG--RLHPKAPEVYLLLN 491
E+A LMK + E + G S + + E+ E A + P+ +Y+LL+
Sbjct: 563 EDAHN---LMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLS 619
Query: 492 DL 493
+L
Sbjct: 620 NL 621
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 179/397 (45%), Gaps = 56/397 (14%)
Query: 30 CTSPAGDINYAYL---VFTQIKKP-----------NLFIWNTIIRGFSQSSTPRNAILLF 75
C + G N+ L TQI+K ++ WN I + ++ A+ +F
Sbjct: 28 CNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVF 87
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLG---LARDGAQLHGRVVKQGLEFDQFIHNTIIYM 132
M S + +Y + Y + G LAR ++ + E D N +I
Sbjct: 88 KRMPRWSSV-----SYNGMISGYLRNGEFELAR-------KLFDEMPERDLVSWNVMIKG 135
Query: 133 YANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
Y L +AR +F E+ E DV +WN+M+ G A+ G +D++R +FD+M +N VSWN++
Sbjct: 136 YVRNRNLGKARELF-EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS---LLNACAKLGAIRQG-EWIHNFLV 248
+S YV+N K +EA LF+ + + +VS LL K I + ++ + V
Sbjct: 195 LSAYVQNSKMEEACMLFKSRE-------NWALVSWNCLLGGFVKKKKIVEARQFFDSMNV 247
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
+ NTI+ Y + G + A Q+F+ P + + W +MV G N EA +
Sbjct: 248 RDVVSWNTIITG-----YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 309 LFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL 368
LF + N +S+ A+L ++ AK+ F +M ++ ++ M+
Sbjct: 303 LFDKMPERN----EVSWNAMLAGYVQGERMEMAKELFDVMP-----CRNVSTWNTMITGY 353
Query: 369 GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+ G + EA+ L MP D + W ++++ + G+
Sbjct: 354 AQCGKISEAKNLFDKMPK-RDPVSWAAMIAGYSQSGH 389
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 130/286 (45%), Gaps = 43/286 (15%)
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
D+ WN I + G +E+ R+F +M ++VS+N MISGY+RN +F+ A +LF EM
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
E+++ S M+ LG R+ L E + ++ Y + GC +
Sbjct: 123 ERDL-VSWNVMIKGYVRNRNLGKARE-------LFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG--------------------- 312
A VF+ +P+K WN+++ N EA LF
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 313 -------LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
S N++ D +S+ ++T SGK+++A+ F + ++ + ++ MV
Sbjct: 235 IVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLF----DESPVQ-DVFTWTAMV 288
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ ++EEA +L MP + + + W ++L+ + +EMAK+
Sbjct: 289 SGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMAKE 333
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 322 bits (824), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 290/496 (58%), Gaps = 10/496 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M +K++HAH ++TG+ + R+L ++ YA +F + F++N +I+
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLI-----PNLVYARKLFDHHQNSCTFLYNKLIQ 55
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ P +I+L+ ++L ++P T+ +F A A AR LH + + G E
Sbjct: 56 AYYVHHQPHESIVLY-NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F T+I YA G L AR +FDE+ ++ DV WN+MI G + G++ + LFD
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEM-SKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQ 239
M +N SW ++ISG+ +N + EAL++F M+ ++++KP+ T+VS+L ACA LG +
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLA 298
G + + N F N V A I+MY KCG + A ++F + ++ L WNSM+ LA
Sbjct: 234 GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +EA+ LF+ + KPD ++F+ +L AC H G V + ++ F M E +KI P +
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKL 353
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CM+D LGR G L+EA LI++MP PDA++WG+LL AC HGN+E+A+ A++ + +
Sbjct: 354 EHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFK 413
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS-LIEVDGEVHEFVAGG 477
L+ V+MSN+YAA+ +++ + R LMK+ + K G S +EV +VH+F
Sbjct: 414 LEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVED 473
Query: 478 RLHPKAPEVYLLLNDL 493
+ HP++ E+Y +L ++
Sbjct: 474 KSHPRSYEIYQVLEEI 489
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 185/558 (33%), Positives = 293/558 (52%), Gaps = 68/558 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +K++HA ++K+ L D ++++ S + A F Q++ PN+ ++NT+IR
Sbjct: 33 LNQVKQLHAQILKSNLHVDLFVVPKLIS-AFSLCRQMLLATNAFNQVQYPNVHLYNTMIR 91
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S +S P A F M T+P L K +H ++ K G
Sbjct: 92 AHSHNSQPSQAFATFFAMQRDGHY-ADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFM 150
Query: 121 FDQFIHNTIIYMYANCG----------FLS------------------------EARLMF 146
D F+ N++I Y+ CG F+S EAR +F
Sbjct: 151 SDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVF 210
Query: 147 DEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY---------- 196
DE+ E D ++WN+M+ G K G++D++ +LFD+M RN VSW++M+ GY
Sbjct: 211 DEM-PEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMAR 269
Query: 197 -------VRNVK--------------FKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
V+N+ +EA+ LF +M++ +K T++S+L ACA+ G
Sbjct: 270 MLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESG 329
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+ GE IH + N F+ T + A++DMY KCG A VFN + K + WN+M+
Sbjct: 330 LLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQ 389
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
GLAM+G+ +A++LF ++ P+ ++ I VL AC H+G ++ YF+ M Y +
Sbjct: 390 GLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLV 449
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P ++HY CMVD LGR G LEEA +LIR+MP P+AIIWG+LL ACR H +E+A++
Sbjct: 450 PEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNAIIWGTLLGACRMHNAVELAREVLDH 509
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
++EL+ +S + ++SN+YAA+ + RL M+ + +K G S IEV+ EVHEF
Sbjct: 510 LVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRMRSIGTKKPSGASSIEVNNEVHEFTV 569
Query: 476 GGRLHPKAPEVYLLLNDL 493
R HPK+ +Y ++N L
Sbjct: 570 FDRSHPKSDNIYQVINGL 587
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/449 (35%), Positives = 270/449 (60%), Gaps = 2/449 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH +K G + + L + ++ A VF ++ + ++ W T++ G+++
Sbjct: 162 EAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYAR 221
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A LF M+V ++P +T + A Q+GL G LH V + G+
Sbjct: 222 AGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVN 281
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ M+ CG + AR +FD ++ + DV +W SM+ AKCG+++ + +LF M R
Sbjct: 282 LDNALVDMFGKCGCVRYAREVFDGMEVK-DVYSWTSMVNAYAKCGDLESAEQLFKDMPRR 340
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSW+ MI+ Y + + +EA+ LFREM + P + T+VS+L+ACA+LG + G WI+
Sbjct: 341 NVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIY 400
Query: 245 -NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
N++V+N L + A+IDM+ KCG A ++F+ + ++ + WN+M+ A++G
Sbjct: 401 ENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQS 460
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EAI+LF L+ N+ PD I+F+ +L +C+HSG V++ + YF M Y+I+P ++HY+C
Sbjct: 461 EEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYAC 520
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
M+D LG+ GLLEEA ++ R MP + D WG+LL+ACR HGN+E+ A +++ELD ++
Sbjct: 521 MIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSD 580
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKE 452
S YVLMS +YA+ ++++ R+ M++
Sbjct: 581 SGIYVLMSQIYASKNKWDQVKMLRMTMRD 609
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 202/429 (47%), Gaps = 21/429 (4%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFC--TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+ L ++HA L TGLA + A LAFC ++P + A ++ PN ++ T++
Sbjct: 49 RRLLQLHALLTVTGLAGNGFPAFGFLAFCALSTPPRLAHAAAILARASPGPNAYMLGTMM 108
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL------GLARDGAQLHGR 113
RGF ++ P A+ LF +V + T+ KA A G G +H
Sbjct: 109 RGFLRARLPARALGLF-RRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSGGEAIHCA 167
Query: 114 VVKQGLEFDQ-FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID 172
+K G + + N +++ YAN L +A +FDE+ E DVV+W +++ G A+ G D
Sbjct: 168 ALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEM-PERDVVSWTTLVDGYARAGLAD 226
Query: 173 ESRRLFDKMV-----SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
E+ RLF +MV N V+ + +S + + L + + E + S +L
Sbjct: 227 EAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNAL 286
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
++ K G +R + + + + T++++ Y KCG E A Q+F +P++ +
Sbjct: 287 VDMFGKCGCVRYAREVFDGMEVK----DVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNV 342
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
W+ M+ + EA+ LF + ++ + P + ++VL+AC G ++ + +
Sbjct: 343 VSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYEN 402
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ KI ++ + ++D + G + EA KL M ++ + + W +++ A HG E
Sbjct: 403 YIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEM-AERNVVSWNTMIMAHAVHGQSE 461
Query: 408 MAKQAAKQI 416
A + +Q+
Sbjct: 462 EAIRLFEQL 470
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 273/461 (59%), Gaps = 3/461 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H H+ K GL D I S L + G++ YA VF ++ ++ WN++I G+SQ
Sbjct: 107 EQMHNHITKLGLLSD-IFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQ 165
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ ++ + LF ++ ++ ++T + A +LG + + +E D +
Sbjct: 166 CNRFKDILALF-KLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVY 224
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ NT++ + G L A +F + ++V N+MI AK +I +R++FD++ +
Sbjct: 225 LGNTLVDYFGRRGQLQSAEKVFFNMKVR-NIVTMNAMIAAYAKGQDIVSARKIFDQIPKK 283
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SW+SMISGY + F +ALE+FR+MQ +KP + S++++CA LGA+ G+W+H
Sbjct: 284 DLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVH 343
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N + +TI+ ++IDMY KCG + ALQVF + +K WNS++ GLA NG+E
Sbjct: 344 EYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEK 403
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
E++ LF + + +P+ ++F+ VL AC ++ V + D+F M Y ++P +KHY C+
Sbjct: 404 ESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCV 463
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG LE+A + I MP DPD ++W LL +C HG++ +A+ K++ EL+ + S
Sbjct: 464 VDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNS 523
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 465
Y L+SN YA+++++ EAM R M + + K PGCS +E
Sbjct: 524 GNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 564
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 211/435 (48%), Gaps = 66/435 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M+ +K++HA+ I +GL A S++L D+ +A+ VF QI+ P F+WN +IR
Sbjct: 1 MEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIR 60
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G +QS P +AI F + P LT+P + KA A++ +G Q+H + K GL
Sbjct: 61 GLAQSDAPADAIA-FYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLL 119
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ N++I++YA CG L AR +FDE+ + DVV+WNS+I G ++C
Sbjct: 120 SDIFVSNSLIHLYAACGNLCYARSVFDEMVVK-DVVSWNSLICGYSQCN----------- 167
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+FK+ L LF+ MQ + +K + TM+ +++AC +LG
Sbjct: 168 --------------------RFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMA 207
Query: 241 EWIHNFLVTNCFEL-------------------------------NTIVVTAIIDMYCKC 269
+++ ++ C E+ N + + A+I Y K
Sbjct: 208 DYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKG 267
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
A ++F+ +PKK L W+SM+ G + + ++A+++F +Q + +KPD I +V+
Sbjct: 268 QDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVV 327
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
++C H G ++ K + IK + ++D + G +EA ++ + M + D
Sbjct: 328 SSCAHLGALDLGK-WVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEM-KEKD 385
Query: 390 AIIWGSLLSACRKHG 404
+ W S++ +G
Sbjct: 386 TLSWNSIIIGLANNG 400
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 142/285 (49%), Gaps = 5/285 (1%)
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+ ++FD++ + T WN +I G ++ +A+ +++ Q + P T +L ACA+
Sbjct: 40 AHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACAR 99
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ A+ +GE +HN + + V ++I +Y CG A VF+ + K + WNS+
Sbjct: 100 INALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSL 159
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ G + + + LF +Q+ +K D ++ I V++AC G + A DY E Y
Sbjct: 160 ICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMA-DYMVRYIEDYC 218
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
I+ + + +VD GR G L+ AEK+ +M + + ++++A K +I A++
Sbjct: 219 IEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKV-RNIVTMNAMIAAYAKGQDIVSARKIF 277
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
QI K + + M + Y+ + F +A+E M+ K++ +
Sbjct: 278 DQI---PKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPD 319
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 298/559 (53%), Gaps = 69/559 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +K++HA +I+ L +D A ++++ S N A VF Q+++PN+ + N++IR
Sbjct: 32 LNQVKQLHAQIIRRNLHQDLHIAPKLIS-ALSLCRQTNLALRVFNQVQEPNVHLCNSLIR 90
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ +S P A +F +M + TYP L KA + L +H + K GL
Sbjct: 91 AHALNSQPYQAFFVFSEMQRFG-LFADNFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLS 149
Query: 121 FDQFIHNTIIYMYANCGFLS--EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D ++ N +I Y+ CG L +A +F+++ +E D V+WNSM+ GL K GE+ ++R+LF
Sbjct: 150 SDIYVPNALIDCYSRCGGLGVRDAMKLFEKM-SERDTVSWNSMLGGLVKAGELRDARKLF 208
Query: 179 D-------------------------------KMVSRNTVSWNSMISGYVRNVKFKEALE 207
D KM RNTVSW++M+ GY + + A
Sbjct: 209 DEMPQRDLISWNTMLDGYARCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 208 LFREMQEQNIKPSEFTMV-------SLLNACAKL-------------------------- 234
+F +M +T++ LL KL
Sbjct: 269 MFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAES 328
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G + G H+ + + N V+ A++DMY KCG ++A VFN +PKK L WN+M+
Sbjct: 329 GLLSLGMRAHSIIKKSNLNSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTML 388
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GL ++G+ EAI+LFS ++ + PD ++FIAVL +CNH+G +++ DYF M + Y +
Sbjct: 389 HGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P ++HY C+VD LGR G L+EA K++++MP +P+ +IWG+LL ACR H +++AK+
Sbjct: 449 VPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+++LD ++ Y L+SN+YAA+ +E + R MK + +EK G S +E++ +HEF
Sbjct: 509 NLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFT 568
Query: 475 AGGRLHPKAPEVYLLLNDL 493
+ HPK+ ++Y +L L
Sbjct: 569 VFDKSHPKSDQIYQMLGSL 587
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 10/220 (4%)
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
L CA L ++Q +H ++ + + +I C AL+VFN V + +
Sbjct: 26 LPKCANLNQVKQ---LHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQEPNV 82
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
NS++ A+N +A +FS +Q L D ++ +L AC+ + K
Sbjct: 83 HLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNH 142
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLL--EEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+ E + I + ++D R G L +A KL M S+ D + W S+L K G
Sbjct: 143 I-EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKM-SERDTVSWNSMLGGLVKAGE 200
Query: 406 IEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+ + A K E+ + + + M + YA + A E
Sbjct: 201 L---RDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFE 237
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 290/507 (57%), Gaps = 18/507 (3%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
++L KIHA ++ +G ++ + +L+ S G + A VF I P+ +WN II+G
Sbjct: 41 RNLAKIHAQIVVSGFSQKNYILNHLLSLYIS-FGSLGSAQKVFEDITAPSTTVWNQIIKG 99
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++S T + +I LF M + + ++ TY L A + L R+G Q+HGRV+ G
Sbjct: 100 HTRSKTSKKSIELFKRMTL-AGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWS 158
Query: 122 DQFIHNTIIYMYANCGF-----LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
+ ++ +I +YAN G L AR +FDE+ + +VV WNS++ G + G+ D +R+
Sbjct: 159 NLYVRTNLINLYANGGDGGDFDLKRARYLFDEM-PDSNVVGWNSLLAGYVRRGDFDGARK 217
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M RN +W M++G+ +N + K AL LF +M+ ++ + +V+ L+ACA+LG
Sbjct: 218 VFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELGD 277
Query: 237 IRQGEWIHNFLVTNCFELNTIVVT----AIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
+ G+WIH ++ + V+ A+I MY CG + A +VF +P++ W+S
Sbjct: 278 LTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEIPQRNTVSWSS 337
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSN---LKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
++ G A G EAI++F + S ++PD I+FI LTAC+H+G ++ F M
Sbjct: 338 IITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQSMH 397
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+T+ + P I+HY CMVD L RAGLL EA LI SMP P+ +WG+LLS CR H N E+
Sbjct: 398 KTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIV 457
Query: 410 KQAAKQI-IELD-KNESCGY-VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
AK + E+ N++ GY +L++N+YAA ++++ R M ++ ++K G S IE+
Sbjct: 458 SHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIEI 517
Query: 467 DGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+G + F+ G H +Y +L ++
Sbjct: 518 NGVLCSFMVGEETHKDVNLIYEMLGNI 544
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 170/495 (34%), Positives = 289/495 (58%), Gaps = 36/495 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPA-GDINYAYLVFTQIKKPNLFIWNTI 58
+++L +I A+ IK+ + +D ++++ FCT SP ++YA +F + +P++ I+N++
Sbjct: 42 LRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSM 100
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG+S+ + P LF+++L I P T+PSL KA A +G QLH +K G
Sbjct: 101 ARGYSRFTNPLEVFSLFVEIL-EDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 159
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L+ + ++ T+I MY +C ++D +R +F
Sbjct: 160 LDDNVYVCPTLINMYT--------------------------------ECEDVDSARXVF 187
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D++V V +N+MI+GY R + EAL LFREMQ + +KP+E T++S+L++CA LG++
Sbjct: 188 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD 247
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+WIH + + F V TA+IDM+ KCG + A+ +F + K W++M+ A
Sbjct: 248 LGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYA 307
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +++ +F ++S N++PD I+F+ +L AC+H+G+V + + YF+ M + I PSI
Sbjct: 308 NHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSI 367
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
KHY MVD L AG LE+A + I +P P ++W LL+AC H N+++A++ +++I E
Sbjct: 368 KHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFE 427
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD + YV++SNLYA + ++E R +MK+ K K PGCS IEV+ VHEF +G
Sbjct: 428 LDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDG 487
Query: 479 LHPKAPEVYLLLNDL 493
+ +++ L+++
Sbjct: 488 VKSATTKLHRALDEM 502
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 162/471 (34%), Positives = 270/471 (57%), Gaps = 6/471 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+N A VF ++ +WN +I G+ QS +A LF M V+ + T+ S+
Sbjct: 246 GDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRM-VSEKVPLDEFTFTSV 304
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEF----DQFIHNTIIYMYANCGFLSEARLMFDEVD 150
A A G G +HG++++ F ++N ++ +Y+ G + A+ +FD ++
Sbjct: 305 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 364
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
+ DVV+WN+++ G G +D++ +F M +N +SW M+SGYV ++AL+LF
Sbjct: 365 LK-DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 423
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M+ +++KP ++T + AC +LGA++ G +H LV FE + A++ MY KCG
Sbjct: 424 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 483
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
A VF +P WN+M+ L +G+ EA++LF + + + PD ISF+ +LT
Sbjct: 484 AVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILT 543
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
ACNH+G V++ YF M + I P HY+ ++D LGR+G + EA LI++MP +P
Sbjct: 544 ACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTP 603
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
IW ++LS CR +G++E AA Q+ + Y+L+SN Y+A+ ++ +A R LM
Sbjct: 604 SIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLM 663
Query: 451 KEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ ++KEPGCS IEV ++H F+ G HP+A EVY L +G ++++G
Sbjct: 664 RDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLG 714
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 210/450 (46%), Gaps = 50/450 (11%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQI--KKPNLFIWNTIIRGFSQSSTPRNAILLF 75
+ P A+ ++A + AG + A F + + + + N ++ F+++S A+ +F
Sbjct: 90 RAPSPATSLVA-AQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVF 148
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLG--LARDGAQLHGRVVKQGLEFDQFIHNTIIYMY 133
+L + ++P ++ +L A Q+ A QLH V+K G + N +I +Y
Sbjct: 149 HALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALY 208
Query: 134 ANCGFLS---EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
C +AR + DE+ + D+ W +M++G + G+++ +R +F+++ + V WN
Sbjct: 209 MKCDTPEASWDARKVLDEMPDKDDLT-WTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWN 267
Query: 191 SMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH------ 244
+MISGYV++ +A ELFR M + + EFT S+L+ACA G G+ +H
Sbjct: 268 AMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRL 327
Query: 245 --NFLVTNCFELNTIVVT---------------------------AIIDMYCKCGCPERA 275
NF+ +N +VT I+ Y GC ++A
Sbjct: 328 QPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKA 387
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
++VF +P K W MV G G +A+KLF+ +++ ++KP ++ + AC
Sbjct: 388 VEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGEL 447
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
G + + + + + S + ++ + G + +A + MP + D++ W +
Sbjct: 448 GALKHGRQLHAHLVQC-GFEASNSAGNALLTMYAKCGAVNDARLVFLVMP-NLDSVSWNA 505
Query: 396 LLSACRKHGN----IEMAKQAAKQIIELDK 421
++SA +HG+ +E+ Q + I+ D+
Sbjct: 506 MISALGQHGHGREALELFDQMVAEGIDPDR 535
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K +++HAHL++ G A + +L + G +N A LVF + + WN +I
Sbjct: 450 LKHGRQLHAHLVQCGFEASNSAGNALLTM-YAKCGAVNDARLVFLVMPNLDSVSWNAMIS 508
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GL 119
Q R A+ LF D +V I P R+++ ++ A GL +G + + G+
Sbjct: 509 ALGQHGHGREALELF-DQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGI 567
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID----ESR 175
+ + +I + G + EAR + + E W +++ G G+++ +
Sbjct: 568 SPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAAD 627
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+LF +M+ ++ ++ + + Y ++ +A + + M+++ +K C+
Sbjct: 628 QLF-RMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEP--------GCSW-- 676
Query: 236 AIRQGEWIHNFLVTN 250
I G IH FLV +
Sbjct: 677 -IEVGSKIHVFLVGD 690
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 278/466 (59%), Gaps = 11/466 (2%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDIN---YAYLVFTQIKKPNLFIWNTIIR 60
L++IHAH ++ GL + ++IL+ S G +N YA +F Q + P + ++N +I+
Sbjct: 25 LREIHAHFLRHGLNQ----LNQILSHFVSICGSLNKMAYANRIFKQTQNPTIILFNAMIK 80
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+S + + LF M I P T L KA + LG+ + G +H V+ G E
Sbjct: 81 GYSLNGPFEESFRLFSSM-KNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFE 139
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
I +I +Y++CG + +A +FDE+ + DV+ WN MI G K G++D LF +
Sbjct: 140 GFSAIRIGVIELYSSCGVMEDAEKVFDEM-YQRDVIVWNLMIHGFCKRGDVDMGLCLFRQ 198
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VSWN MIS ++ + EAL LF +M + KP E T+V++L CA+LG++ G
Sbjct: 199 MRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVG 258
Query: 241 EWIHNFLVTNCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
+WIH++ ++ + + V A++D Y K G E A +VF+ +P+K + WN+++ GLA+
Sbjct: 259 KWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRKNVISWNTLISGLAL 318
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG ++L + + ++P+ +F+ VL+ C H+G + ++ M E ++I+P ++
Sbjct: 319 NGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLASMVEHHQIEPKLE 378
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSD-PDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
HY CMVD LGR+G + EA LIR MP P+A +WGSLLSACR HG++E+A A K++I+
Sbjct: 379 HYGCMVDLLGRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGDVELAHLAVKELID 438
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
L+ S YVL+SN+YA ++++ R +M+E ++K PG S+I
Sbjct: 439 LEPWNSGNYVLLSNMYAEEERWDKVANVRGMMREKNVKKTPGQSVI 484
>gi|414886077|tpg|DAA62091.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 656
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 257/430 (59%), Gaps = 3/430 (0%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
I+ A VF +I + + W T+I G+ + +A+ ++ M+ + L K
Sbjct: 226 IDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMK 285
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A+ +G QLH ++K G + F+ T+++ Y CG + A++ F D
Sbjct: 286 ACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSH-TA 344
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WN+++ L + G I E+R LFD M R+TVSW++MISGYV+ + AL+LF M +
Sbjct: 345 SWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTS 404
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
I+P+E T+ S L+A A G + QG+WIH++++ +L + + +IDMY KCG A+
Sbjct: 405 IEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAV 464
Query: 277 QVFNTVPKK--GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
Q FN V K +S WN+M+ LA++GY + ++ LFS LQ +++KP+ I+FI VL+AC H
Sbjct: 465 QFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCH 524
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+G V + K YF MT Y I+P+IKHY CMVD LGRAG LEEAE+L+ MP PD +IWG
Sbjct: 525 AGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWG 584
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
S+LSA R GN+ + ++AA+++ +LD+ + +SN+YA + + R +++
Sbjct: 585 SILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWINVSVVRKELQDAN 644
Query: 455 IEKEPGCSLI 464
+E+ G S I
Sbjct: 645 LERLTGRSGI 654
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 197/430 (45%), Gaps = 45/430 (10%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIKK--PNLFIWNTIIRGFSQSSTPRNAILLF 75
+D A + +LA T AG ++ A + ++ + + + T++ F+++ A+ +F
Sbjct: 74 RDATARNSVLAALTR-AGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVF 132
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
ML + + P T A+A+ G +HG +++ L+ + +++ YA
Sbjct: 133 RSML-SENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAG 191
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
L AR +FD + T + V WN M+ G K ID + +F ++ R+ VSW ++I G
Sbjct: 192 VLELCSARALFDGM-TYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDG 250
Query: 196 YVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFEL 254
Y+ +A++ + +M E E +V L+ ACA+ A+ +G+ +H ++ N F+
Sbjct: 251 YICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDA 310
Query: 255 NTIVVTAIIDMYCKC-------------------------------GCPERALQVFNTVP 283
+ V ++ Y C G A ++F+ +P
Sbjct: 311 HAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMP 370
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK- 342
++ W++M+ G G + A+KLF + +++++P+ ++ + L+A SG ++Q K
Sbjct: 371 ERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKW 430
Query: 343 --DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII-WGSLLSA 399
DY +M ++ ++ S ++D + G + +A + + ++ W +++ +
Sbjct: 431 IHDY--IMNRPVQLTDNLS--SGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICS 486
Query: 400 CRKHGNIEMA 409
HG M+
Sbjct: 487 LAIHGYAHMS 496
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 160/385 (41%), Gaps = 68/385 (17%)
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQFIHNTIIYMYANC-GFLSEARLMFDEV 149
P L + + R G QLH K GL + F+ N+++ Y+ L+ A +FDE
Sbjct: 10 PFLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDET 69
Query: 150 DTEF-DVVAWNSMIIGLAKCGEIDESRRLFDKM--VSRNTVSWNSMISGYVRNVKFKEAL 206
D A NS++ L + G +D ++ L ++M + R+ VS+ ++++ + R A+
Sbjct: 70 PPPLRDATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAV 129
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
+FR M +N+ P+E T+ + A A+ GA IH F + + IV T ++ Y
Sbjct: 130 AVFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAY 189
Query: 267 CKC--GCPERAL-----------------------------QVFNTVPKKGLSCWNSMVF 295
C RAL +VF +P++ W +++
Sbjct: 190 AGVLELCSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLID 249
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDY-ISFIAVLTACNHSGKVNQAKDYFTLMTE---- 350
G ++A+K + + DY + + ++ AC V + + T++ +
Sbjct: 250 GYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFD 309
Query: 351 ------------------------TYKI--KPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
T+++ K ++ ++ AL R GL+ EA +L M
Sbjct: 310 AHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDM 369
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMA 409
P + D + W +++S + G +MA
Sbjct: 370 P-ERDTVSWSTMISGYVQTGRSDMA 393
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 159/461 (34%), Positives = 273/461 (59%), Gaps = 3/461 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H H+ K GL D I S L + G++ YA VF ++ ++ WN++I G+SQ
Sbjct: 572 EQMHNHITKLGLLSD-IFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQ 630
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ ++ + LF ++ ++ ++T + A +LG + + +E D +
Sbjct: 631 CNRFKDILALF-KLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVY 689
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ NT++ + G L A +F + ++V N+MI AK +I +R++FD++ +
Sbjct: 690 LGNTLVDYFGRRGQLQSAEKVFFNMKVR-NIVTMNAMIAAYAKGQDIVSARKIFDQIPKK 748
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SW+SMISGY + F +ALE+FR+MQ +KP + S++++CA LGA+ G+W+H
Sbjct: 749 DLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVH 808
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N + +TI+ ++IDMY KCG + ALQVF + +K WNS++ GLA NG+E
Sbjct: 809 EYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEK 868
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
E++ LF + + +P+ ++F+ VL AC ++ V + D+F M Y ++P +KHY C+
Sbjct: 869 ESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCV 928
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG LE+A + I MP DPD ++W LL +C HG++ +A+ K++ EL+ + S
Sbjct: 929 VDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNS 988
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 465
Y L+SN YA+++++ EAM R M + + K PGCS +E
Sbjct: 989 GNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCSAVE 1029
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 256/448 (57%), Gaps = 9/448 (2%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLF-----IWNTIIRGFSQS 65
L +T D IAA R++A + +Q+ +F W+ +++ +S
Sbjct: 9 LGRTSPPVDAIAARRLVALLLEHQDRRRQLLQIHSQLIAHQVFDRRPTPWHALLKAYSHG 68
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
P++A+ LF + T+ KA A LG R QLHG VV++G EF ++
Sbjct: 69 PHPQDALQLFRHARWHAADDTYAFTFA--LKACAGLGWPRCCMQLHGLVVRKGFEFQTYV 126
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
H ++ +Y CG L+++R+ F+E+ + + V+WN +I G A GE++ +R LF++M RN
Sbjct: 127 HTALVNVYILCGCLADSRMAFEEMPVK-NAVSWNVVITGFAGWGEVEYARLLFERMPCRN 185
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSW+ MI GY R + EA+ LFR M + I PSE T+++++ A + +G I GE +H
Sbjct: 186 VVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVPALSNVGKILIGEALHG 245
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN-TVPKKGLSCWNSMVFGLAMNGYEN 304
+ + V ++ID+Y K G + +L+VF+ + ++ L W S++ G AM+G
Sbjct: 246 YCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSV 305
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A++LF+ ++ + ++P+ I+F++VL AC+H G V Q +F M Y I P +KH+ C+
Sbjct: 306 KAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCI 365
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
+D LGRAG L EAE++IR P + +A +W +LL C K+G +EM ++ K+I+ L++
Sbjct: 366 IDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREFG 425
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKE 452
+V++SN+ +F +A R L+ +
Sbjct: 426 GDFVVLSNMLTELRRFSDAEIVRKLVDQ 453
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 211/435 (48%), Gaps = 66/435 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M+ +K++HA+ I +GL A S++L D+ +A+ VF QI+ P F+WN +IR
Sbjct: 466 MEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIR 525
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G +QS P +AI F + P LT+P + KA A++ +G Q+H + K GL
Sbjct: 526 GLAQSDAPADAIA-FYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLL 584
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ N++I++YA CG L AR +FDE+ + DVV+WNS+I G ++C
Sbjct: 585 SDIFVSNSLIHLYAACGNLCYARSVFDEMVVK-DVVSWNSLICGYSQCN----------- 632
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+FK+ L LF+ MQ + +K + TM+ +++AC +LG
Sbjct: 633 --------------------RFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMA 672
Query: 241 EWIHNFLVTNCFEL-------------------------------NTIVVTAIIDMYCKC 269
+++ ++ C E+ N + + A+I Y K
Sbjct: 673 DYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKG 732
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
A ++F+ +PKK L W+SM+ G + + ++A+++F +Q + +KPD I +V+
Sbjct: 733 QDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVV 792
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
++C H G ++ K + IK + ++D + G +EA ++ + M + D
Sbjct: 793 SSCAHLGALDLGK-WVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEM-KEKD 850
Query: 390 AIIWGSLLSACRKHG 404
+ W S++ +G
Sbjct: 851 TLSWNSIIIGLANNG 865
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 142/285 (49%), Gaps = 5/285 (1%)
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+ ++FD++ + T WN +I G ++ +A+ +++ Q + P T +L ACA+
Sbjct: 505 AHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACAR 564
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ A+ +GE +HN + + V ++I +Y CG A VF+ + K + WNS+
Sbjct: 565 INALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSL 624
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ G + + + LF +Q+ +K D ++ I V++AC G + A DY E Y
Sbjct: 625 ICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMA-DYMVRYIEDYC 683
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
I+ + + +VD GR G L+ AEK+ +M + + ++++A K +I A++
Sbjct: 684 IEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVR-NIVTMNAMIAAYAKGQDIVSARKIF 742
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
QI K + + M + Y+ + F +A+E M+ K++ +
Sbjct: 743 DQI---PKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPD 784
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 274/497 (55%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K IH + I+ G AK + S LA S G + A L+F + + + WN+++ G+ Q
Sbjct: 268 KSIHGYAIRAGFAK-LVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P AI +F ML I P +T A A LG LE +F
Sbjct: 327 NGEPEKAIAVFEKML-EEGIDPTGVTIMEALHACADLG---------------DLERGKF 370
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+H + D+++ D+ NS+I +KC +D + +F+ + R
Sbjct: 371 VHKFV-----------------DQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR 413
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
VSWN+MI GY +N + EAL F EM+ +KP FTMVS++ A A+L R +WIH
Sbjct: 414 THVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIH 473
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ +C + N V TA++DMY KCG A ++F+ + + + WN+M+ G +G
Sbjct: 474 GLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGR 533
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A+ LF ++ ++P+ I++++V++AC+HSG V++ +F M + Y ++PS+ HY M
Sbjct: 534 AALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAM 593
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG ++EA I +MP P ++G+ AC+ H NIE+ ++AAK++ EL+ +E
Sbjct: 594 VDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEG 653
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
+VL++N+YA++ ++ + E R M++ ++K PGCS++E+ EVH F +G HP++
Sbjct: 654 GYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSK 713
Query: 485 EVYLLLNDLGLLIQEMG 501
+Y L +L I+ G
Sbjct: 714 RIYAFLEELVYEIKAAG 730
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 169/342 (49%), Gaps = 34/342 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
MK+L +I +IK GL + + +++++ S G IN A VF I +++T+++
Sbjct: 62 MKELHQIIPLVIKNGLYNEHLFQTKLVSLF-SKYGSINEAARVFEPIDDKLDALYHTMLK 120
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G++++S+ A L F+ + ++P + L K + G ++HG+++
Sbjct: 121 GYAKNSSLETA-LAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFA 179
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ F ++ MYA KC +ID++ ++FD+
Sbjct: 180 ANVFAMTGVVNMYA--------------------------------KCRQIDDAYKMFDR 207
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VSWN++I+G+ +N K+ALEL MQ++ +P T+V++L A A +G + G
Sbjct: 208 MPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVG 267
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ IH + + F + TA+ DMY KCG E A +F+ + +K + WNSM+ G N
Sbjct: 268 KSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQN 327
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
G +AI +F + + P ++ + L AC G + + K
Sbjct: 328 GEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK 369
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 135/277 (48%), Gaps = 11/277 (3%)
Query: 165 LAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
+K G I+E+ R+F+ + + +++M+ GY +N + AL M+ ++KP +
Sbjct: 91 FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNF 150
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
LL C +++G+ IH L+TN F N +T +++MY KC + A ++F+ +P+
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
+ L WN+++ G + NG+ +A++L +Q +PD I+ + VL A G + K
Sbjct: 211 RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKS- 269
Query: 345 FTLMTETYKIKPS----IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSAC 400
Y I+ + + + D + G +E A + M + W S++
Sbjct: 270 ----IHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGM-DQKTVVSWNSMMDGY 324
Query: 401 RKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
++G E A ++++E + + G +M L+A +
Sbjct: 325 VQNGEPEKAIAVFEKMLE-EGIDPTGVTIMEALHACA 360
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 181/517 (35%), Positives = 289/517 (55%), Gaps = 49/517 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAA---SRILAFCTS-PAGDINYAYLVFTQIKKPNLFIWN 56
M LK+IHA ++T + P A + IL +S ++ YA VF PN F+WN
Sbjct: 35 MPQLKQIHAQTLRTVNSNHPNAIFLYTNILQHYSSLTQPNLTYATRVFHHFPNPNSFMWN 94
Query: 57 TIIRGFSQSSTPRN---AILLFIDMLVTS--PIQPQRLTYPSLFKAYAQLGLARDGAQLH 111
T+IR +++S+ + A+ L+ M+ P T+P + KA A +G Q+H
Sbjct: 95 TLIRVYARSTNTNHKHKAMELYKTMMTMEEKTAVPDNHTFPIVLKACAYTFSLCEGKQVH 154
Query: 112 GRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
V+K G E D +I N++++ YA CG +
Sbjct: 155 AHVLKHGFESDTYICNSLVHFYAT--------------------------------CGCL 182
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
D + ++F KM RN VSWN MI Y + F AL +F EMQ + P +TM S+++AC
Sbjct: 183 DLAEKMFYKMSERNEVSWNIMIDSYAKGGIFDTALRMFGEMQRVH-DPDGYTMQSVISAC 241
Query: 232 AKLGAIRQGEWIHNFLVTNCFEL---NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
A LGA+ G W+H +++ C + + +V T ++DMYCK G E A QVF ++ + L+
Sbjct: 242 AGLGALSLGLWVHAYILKKCDKNMVDDVLVNTCLVDMYCKSGELEIAKQVFESMAFRDLN 301
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
WNSM+ GLAM+G A+ + + + + P+ I+F+ VL+ACNH G V++ +F +
Sbjct: 302 AWNSMILGLAMHGEAKAALNYYVRMVKVEKIVPNSITFVGVLSACNHRGMVDEGIVHFDM 361
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA-CRKHGNI 406
MT+ Y ++P ++HY C+VD RAG + EA L+ M PDA+IW SLL A C+++ ++
Sbjct: 362 MTKEYNVEPRLEHYGCLVDLFARAGRINEALNLVSEMSIKPDAVIWRSLLDACCKQYASV 421
Query: 407 EMAKQAAKQIIELDKN--ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
E++++ AKQ+ E + + S YVL+S +YA++ ++ + R LM E + KEPGCS+I
Sbjct: 422 ELSEEMAKQVFESEGSVCSSGVYVLLSKVYASACRWNDVGLLRKLMSEKGVTKEPGCSII 481
Query: 465 EVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
E+DG VHEF AG HPK+ +Y ++ ++ ++ +G
Sbjct: 482 EIDGVVHEFFAGDTTHPKSENIYKVVTEIEEKLESIG 518
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 174/498 (34%), Positives = 286/498 (57%), Gaps = 35/498 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H L+ +GL D + A++++ + G + +A +F + K N+F+WN +IR +++
Sbjct: 82 RQLHGRLLVSGLGPDTVLATKLVDL-YAACGLVGHARRLFDGMPKRNVFLWNVLIRAYAR 140
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
AI L+ M V ++P TYP KA A L G ++H RV+ D F
Sbjct: 141 DGPHEVAIQLYRGM-VDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMF 199
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA KCG +D++R +FD++ R
Sbjct: 200 VCAGLVDMYA--------------------------------KCGCVDDARAVFDRIRVR 227
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
++V WNSMI+ Y +N + EAL L R+M + P+ T+VS ++A A A+ +G +H
Sbjct: 228 DSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELH 287
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
F F+ + T+++DMY K G + A +F + K+ L WN+M+ G M+G+ +
Sbjct: 288 GFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFD 347
Query: 305 EAIKLFSGLQ-SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+KLF+ ++ + + PD I+F+ VL+ACNH G V +AK++F LM + Y IKP+++H++C
Sbjct: 348 EALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTC 407
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+VD LG AG EEA LI+ MP PD+ IWG+LL+ C+ H N+E+ + A +++IEL+ +
Sbjct: 408 LVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPED 467
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
+ YVL+SN+YA S ++E+A R LM ++K GCS IE+ G+ H F+ G HP++
Sbjct: 468 AGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRS 527
Query: 484 PEVYLLLNDLGLLIQEMG 501
E+Y L L L+ + G
Sbjct: 528 AEIYEELERLEGLMSDAG 545
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 184/432 (42%), Gaps = 80/432 (18%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G QLHGR++ GL D + ++ +YA CG + AR +F
Sbjct: 81 GRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLF-------------------- 120
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
D M RN WN +I Y R+ + A++L+R M + ++P FT
Sbjct: 121 ------------DGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPL 168
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
L ACA L + G +H ++ + + V ++DMY KCGC + A VF+ + +
Sbjct: 169 ALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRD 228
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF- 345
WNSM+ NG EA+ L + ++ + P + ++ ++A + + + ++
Sbjct: 229 SVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHG 288
Query: 346 --------------TLMTETYK---------------IKPSIKHYSCMVDALGRAGLLEE 376
T + + Y +K + ++ M+ G G +E
Sbjct: 289 FGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDE 348
Query: 377 AEKLIRSMPSD----PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD--KNESCGYVLM 430
A KL M + PD I + +LSAC G ++ AK+ ++++ K + +
Sbjct: 349 ALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCL 408
Query: 431 SNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG-EVHEFVAGG--------RLHP 481
++ + +FEEA + L+K + ++ + G ++G ++H+ V G L P
Sbjct: 409 VDVLGHAGRFEEAYD---LIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEP 465
Query: 482 KAPEVYLLLNDL 493
+ Y+LL+++
Sbjct: 466 EDAGNYVLLSNI 477
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 91/182 (50%), Gaps = 6/182 (3%)
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
S+L +C ++ G +H L+ + +T++ T ++D+Y CG A ++F+ +PK
Sbjct: 66 TSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPK 125
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
+ + WN ++ A +G AI+L+ G+ ++PD ++ L AC + ++
Sbjct: 126 RNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREV 185
Query: 345 FTLMTETYKIKPSIKHYSC--MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
+ T+ + + C +VD + G +++A + + D+++W S+++A +
Sbjct: 186 HERVLGTHWGE---DMFVCAGLVDMYAKCGCVDDARAVFDRIRVR-DSVVWNSMIAAYGQ 241
Query: 403 HG 404
+G
Sbjct: 242 NG 243
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 321 bits (822), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 174/554 (31%), Positives = 301/554 (54%), Gaps = 74/554 (13%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
LK+IHA L+ GL ++++ +S GDI +A VF + +P +F WN IIRG+S
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+++ ++A+L++ +M + + P T+P L KA + L + G +H +V + G + D
Sbjct: 96 RNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 124 FIHN---------------------------------TIIYMYANCGFLSEARLMFDEV- 149
F+ N I+ YA G EA +F ++
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 150 --DTEFDVVAWNSMI---------------------IGL--------------AKCGEID 172
D + D VA S++ +GL AKCG++
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
++ LFDKM S N + WN+MISGY +N +EA+++F EM ++++P ++ S ++ACA
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA 334
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
++G++ Q ++ ++ + + + + +A+IDM+ KCG E A VF+ + + W++
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
M+ G ++G EAI L+ ++ + P+ ++F+ +L ACNHSG V + +F M + +
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-H 453
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
KI P +HY+C++D LGRAG L++A ++I+ MP P +WG+LLSAC+KH ++E+ + A
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA 513
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A+Q+ +D + + YV +SNLYAA+ ++ E R+ MKE + K+ GCS +EV G +
Sbjct: 514 AQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573
Query: 473 FVAGGRLHPKAPEV 486
F G + HP+ E+
Sbjct: 574 FRVGDKSHPRYEEI 587
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
S+ SL+++ ++Q IH L+ + + ++T +I G A QVF
Sbjct: 20 SDSFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+ +P+ + WN+++ G + N + +A+ ++S +Q + + PD +F +L AC+
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
>gi|414886078|tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
Length = 714
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 257/430 (59%), Gaps = 3/430 (0%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
I+ A VF +I + + W T+I G+ + +A+ ++ M+ + L K
Sbjct: 226 IDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMK 285
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A+ +G QLH ++K G + F+ T+++ Y CG + A++ F D
Sbjct: 286 ACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSH-TA 344
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WN+++ L + G I E+R LFD M R+TVSW++MISGYV+ + AL+LF M +
Sbjct: 345 SWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTS 404
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
I+P+E T+ S L+A A G + QG+WIH++++ +L + + +IDMY KCG A+
Sbjct: 405 IEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADAV 464
Query: 277 QVFNTVPKK--GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
Q FN V K +S WN+M+ LA++GY + ++ LFS LQ +++KP+ I+FI VL+AC H
Sbjct: 465 QFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCH 524
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+G V + K YF MT Y I+P+IKHY CMVD LGRAG LEEAE+L+ MP PD +IWG
Sbjct: 525 AGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKPDVVIWG 584
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
S+LSA R GN+ + ++AA+++ +LD+ + +SN+YA + + R +++
Sbjct: 585 SILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWINVSVVRKELQDAN 644
Query: 455 IEKEPGCSLI 464
+E+ G S I
Sbjct: 645 LERLTGRSGI 654
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 197/430 (45%), Gaps = 45/430 (10%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIKK--PNLFIWNTIIRGFSQSSTPRNAILLF 75
+D A + +LA T AG ++ A + ++ + + + T++ F+++ A+ +F
Sbjct: 74 RDATARNSVLAALTR-AGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVF 132
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
ML + + P T A+A+ G +HG +++ L+ + +++ YA
Sbjct: 133 RSML-SENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAG 191
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
L AR +FD + T + V WN M+ G K ID + +F ++ R+ VSW ++I G
Sbjct: 192 VLELCSARALFDGM-TYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDG 250
Query: 196 YVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFEL 254
Y+ +A++ + +M E E +V L+ ACA+ A+ +G+ +H ++ N F+
Sbjct: 251 YICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDA 310
Query: 255 NTIVVTAIIDMYCKC-------------------------------GCPERALQVFNTVP 283
+ V ++ Y C G A ++F+ +P
Sbjct: 311 HAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMP 370
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK- 342
++ W++M+ G G + A+KLF + +++++P+ ++ + L+A SG ++Q K
Sbjct: 371 ERDTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKW 430
Query: 343 --DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII-WGSLLSA 399
DY +M ++ ++ S ++D + G + +A + + ++ W +++ +
Sbjct: 431 IHDY--IMNRPVQLTDNLS--SGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICS 486
Query: 400 CRKHGNIEMA 409
HG M+
Sbjct: 487 LAIHGYAHMS 496
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 160/385 (41%), Gaps = 68/385 (17%)
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQFIHNTIIYMYANC-GFLSEARLMFDEV 149
P L + + R G QLH K GL + F+ N+++ Y+ L+ A +FDE
Sbjct: 10 PFLVASLKRAARLRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDET 69
Query: 150 DTEF-DVVAWNSMIIGLAKCGEIDESRRLFDKM--VSRNTVSWNSMISGYVRNVKFKEAL 206
D A NS++ L + G +D ++ L ++M + R+ VS+ ++++ + R A+
Sbjct: 70 PPPLRDATARNSVLAALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAV 129
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
+FR M +N+ P+E T+ + A A+ GA IH F + + IV T ++ Y
Sbjct: 130 AVFRSMLSENVVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAY 189
Query: 267 CKC--GCPERAL-----------------------------QVFNTVPKKGLSCWNSMVF 295
C RAL +VF +P++ W +++
Sbjct: 190 AGVLELCSARALFDGMTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLID 249
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDY-ISFIAVLTACNHSGKVNQAKDYFTLMTE---- 350
G ++A+K + + DY + + ++ AC V + + T++ +
Sbjct: 250 GYICADLISDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFD 309
Query: 351 ------------------------TYKI--KPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
T+++ K ++ ++ AL R GL+ EA +L M
Sbjct: 310 AHAFVQATLVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDM 369
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMA 409
P + D + W +++S + G +MA
Sbjct: 370 P-ERDTVSWSTMISGYVQTGRSDMA 393
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 278/488 (56%), Gaps = 3/488 (0%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H K DP + ++ + G INYA VF ++ + ++ WNT+I + +
Sbjct: 135 ELHGFAFKIATLSDPFVETGLMDM-YAACGRINYARNVFDEMSQRDVVTWNTMIERYCRF 193
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
A LF +M S + P + ++ A + G R ++ +++ + D +
Sbjct: 194 GLLDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHL 252
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
++ MYA G + A F ++ ++ +M+ G +K G +D++R +FD+ ++
Sbjct: 253 LTALVTMYAGAGCMDMAMEFFRKMSVR-NLFVSTAMVSGYSKAGRLDDARVIFDQTEMKD 311
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
V W +MIS Y + +EAL +F EM IKP TM+S+++AC LG + + +W+H
Sbjct: 312 LVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHR 371
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+ N E + A+I+MY KCG + A VF +P + + W+SM+ AM+G ++
Sbjct: 372 YTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASD 431
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
++ LF+ ++ N++P+ ++F+ VL C+HSG V + K F MT+ Y I P I+HY CMV
Sbjct: 432 SLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMV 491
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D GRA LL EA ++I SMP P+ +IWGSL+SACR HG +E+ + AAK+I++L+ +
Sbjct: 492 DLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDG 551
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
VLMSN+YA Y+++ R +M++ K+ KE G S I+++G+ HEF+ G + H ++ E
Sbjct: 552 ALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNE 611
Query: 486 VYLLLNDL 493
+Y L ++
Sbjct: 612 IYTKLYEV 619
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 214/436 (49%), Gaps = 68/436 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKK-PNLFIWNTII 59
+ +K++HAH+++T + + + +S + +++YA +F+ I P ++N+++
Sbjct: 28 LNHIKQLHAHILRT-VINHKLNSFLFNLSFSSSSINLSYALNLFSSISPLPESIVFNSLL 86
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R S+S PR A +LF + + R+++P + KA +++ +G +LHG K
Sbjct: 87 RDLSRSGEPR-ATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIAT 145
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F+ ++ MYA CG ++ AR +FDE+ ++ DVV WN+MI + G +DE
Sbjct: 146 LSDPFVETGLMDMYAACGRINYARNVFDEM-SQRDVVTWNTMIERYCRFGLLDE------ 198
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
A +LF EM++ N+ P E + ++++AC + G +R
Sbjct: 199 -------------------------AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRY 233
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQ---------------------- 277
I++FL+ N ++T ++TA++ MY GC + A++
Sbjct: 234 NRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSK 293
Query: 278 ---------VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
+F+ K L CW +M+ A + + EA+++F + S +KPD ++ ++V
Sbjct: 294 AGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSV 353
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
++AC + G +++AK + T ++ + + +++ + G L+ A + MP+
Sbjct: 354 ISACVNLGTLDKAK-WVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTR- 411
Query: 389 DAIIWGSLLSACRKHG 404
+ + W S+++A HG
Sbjct: 412 NVVSWSSMINAFAMHG 427
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 129/282 (45%), Gaps = 14/282 (4%)
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
++ +NS++ R+ + + + ++ ++ + + +L A +K+ A+ +G +H
Sbjct: 79 SIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHG 138
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
F + V T ++DMY CG A VF+ + ++ + WN+M+ G +E
Sbjct: 139 FAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDE 198
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A KLF ++ SN+ PD + +++AC +G + + + + E ++ + +V
Sbjct: 199 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIEN-DVRMDTHLLTALV 257
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
AG ++ A + R M S + + +++S K G ++ A+ Q + +
Sbjct: 258 TMYAGAGCMDMAMEFFRKM-SVRNLFVSTAMVSGYSKAGRLDDARVIFDQT---EMKDLV 313
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
+ M + YA S +EA+ ++ +E CS I+ D
Sbjct: 314 CWTTMISAYAESDHPQEAL---------RVFEEMCCSGIKPD 346
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 272/471 (57%), Gaps = 6/471 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+ A VF ++ +WN +I G+ S A LF M++ + T+ S+
Sbjct: 242 GDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLER-VPLDEFTFTSV 300
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEF----DQFIHNTIIYMYANCGFLSEARLMFDEVD 150
A A G G +HG++ + F ++N ++ +Y+ CG ++ AR +FD +
Sbjct: 301 LSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMK 360
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
++ DVV+WN+++ G + +D++ +F++M +N +SW M+SGYV ++AL+LF
Sbjct: 361 SK-DVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFN 419
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
M+ +++KP ++T ++AC +LG+++ G+ +H LV FE + A+I MY +CG
Sbjct: 420 RMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCG 479
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
+ A +F +P WN+M+ L +G+ EA++LF + + + PD ISF+ VLT
Sbjct: 480 AVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLT 539
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
ACNHSG V++ YF M + I P HY+ ++D LGRAG + EA LI++MP +P
Sbjct: 540 ACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTP 599
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
IW ++LS CR G++E+ AA Q+ ++ Y+L+SN Y+A+ ++ +A R LM
Sbjct: 600 SIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLM 659
Query: 451 KEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ ++KEPGCS IE +VH FV G HP+A +VY L +G ++++G
Sbjct: 660 RDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLG 710
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 204/432 (47%), Gaps = 54/432 (12%)
Query: 20 PIAASRILAFCTSPAGDINYAYLVFTQIK--KPNLFIWNTIIRGFSQSSTPRNAILLFID 77
P+AA+ ++A + AG + A F + + + + N +I ++++S A+ +F
Sbjct: 88 PVAATSLVA-AYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRS 146
Query: 78 MLVTSPIQPQRLTYPSLFKAYAQLG--LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
+L + ++P ++ +L A L R AQL V+K G + N ++ +Y
Sbjct: 147 LLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMK 206
Query: 136 CGFLS---EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
C L +AR + DE+ + D + W +M++G + G++ +R +F+++ + V WN+M
Sbjct: 207 CEALEATRDARKVLDEMPDK-DALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAM 265
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH-------- 244
ISGYV + EA ELFR M + + EFT S+L+ACA G G+ +H
Sbjct: 266 ISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQP 325
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCG-------------------------------CPE 273
NF+ +N +VT +Y KCG C +
Sbjct: 326 NFVPEAALPVNNALVT----LYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLD 381
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+A++VF +P K W MV G G+ +A+KLF+ +++ ++KP ++ ++AC
Sbjct: 382 KAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACG 441
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
G + K + + + S + ++ R G ++EA + MP + D++ W
Sbjct: 442 ELGSLKHGKQLHGHLVQ-LGFEGSNSAGNALITMYARCGAVKEANLMFLVMP-NIDSVSW 499
Query: 394 GSLLSACRKHGN 405
+++SA +HG+
Sbjct: 500 NAMISALGQHGH 511
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 99/222 (44%), Gaps = 6/222 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K K++H HL++ G A + ++ + G + A L+F + + WN +I
Sbjct: 446 LKHGKQLHGHLVQLGFEGSNSAGNALITM-YARCGAVKEANLMFLVMPNIDSVSWNAMIS 504
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GL 119
Q R A+ LF D +V I P R+++ ++ A GL +G Q + + G+
Sbjct: 505 ALGQHGHGREALELF-DRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGI 563
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ + +I + G + EAR + + E W +++ G G+++ D
Sbjct: 564 IPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAAD 623
Query: 180 ---KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
KM ++ ++ + + Y ++ +A + + M+++ +K
Sbjct: 624 QLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVK 665
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 57/271 (21%)
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGLAMNGYENEAIKLF-SGL 313
+ T+++ Y G A+ F+ VP ++ N+++ A + A+ +F S L
Sbjct: 89 VAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLL 148
Query: 314 QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS---CMVDALGR 370
S +L+PD SF A+L+A H + S++H + C V G
Sbjct: 149 ASGSLRPDDYSFTALLSAAGHLPNI------------------SVRHCAQLQCSVLKSGA 190
Query: 371 AGLL-------------------EEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
G+L +A K++ MP D DA+ W +++ + G++ A+
Sbjct: 191 GGVLSVSNALVALYMKCEALEATRDARKVLDEMP-DKDALTWTTMVVGYVRRGDVGAARS 249
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAME--ERLLMKEVKIEKEPGCSLIEVDGE 469
+ E+D + M + Y S EA E R++++ V +++ S++
Sbjct: 250 VFE---EVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACAN 306
Query: 470 VHEFVAGGRLHPK--------APEVYLLLND 492
F G +H + PE L +N+
Sbjct: 307 AGFFAHGKSVHGQITRLQPNFVPEAALPVNN 337
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 281/497 (56%), Gaps = 33/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K IHA+ I+ + + + +L + + YA +F + K N W+ +I G+
Sbjct: 230 KAIHAYYIRNFFFDNVVLQTALLDM-YAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVL 288
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ +A+ L+ DML + P T ++ +A AQL + G +LH ++K G++ D
Sbjct: 289 HDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTT 348
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I MYA KCG +D + D+M+++
Sbjct: 349 VGNSLISMYA--------------------------------KCGIMDNAVGFLDEMIAK 376
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+TVS++++ISG V+N ++AL +FR+MQ I P TM++LL AC+ L A++ G H
Sbjct: 377 DTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCH 436
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ V F +T + AIIDMY KCG + ++F+ + + + WN+M+ G ++G
Sbjct: 437 GYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCV 496
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+ LF LQ+ LKPD ++ IAVL+AC+HSG V + K +F+ M++ + IKP + HY CM
Sbjct: 497 EALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICM 556
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD L RAG L+EA I+ MP P+ IWG+LL+ACR H NIEM +Q +K+I L +
Sbjct: 557 VDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGT 616
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
+VLMSN+Y++ ++++A R + + +K PGCS +E+ G +H F+ G + HP++
Sbjct: 617 GNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSA 676
Query: 485 EVYLLLNDLGLLIQEMG 501
+ L +L + ++++G
Sbjct: 677 SINKKLQELLVQMKKLG 693
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 190/402 (47%), Gaps = 40/402 (9%)
Query: 19 DPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM 78
D AA+ LA +I A VF QI KP++ +WN +IR ++ S + +I L++ M
Sbjct: 39 DSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHM 98
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
L + P T+P L KA + L + G +H GL D ++ +++MYA
Sbjct: 99 LQLG-VTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYA---- 153
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV--SRNTVSWNSMISGY 196
KCG + +++ LF+ + R+ V+WN+MI+ +
Sbjct: 154 ----------------------------KCGHLYQAQTLFNSISHQDRDIVAWNAMIAAF 185
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
+ + + +MQ+ + P+ T+VS+L + A+ QG+ IH + + N F N
Sbjct: 186 SFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNV 245
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS- 315
++ TA++DMY KC A ++FNTV KK CW++M+ G ++ ++A+ L+ +
Sbjct: 246 VLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCI 305
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-YKIKPSIKHYSCMVDALGRAGLL 374
L P + +L AC + + K M ++ + ++ + ++ + G++
Sbjct: 306 YGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVG--NSLISMYAKCGIM 363
Query: 375 EEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ A + M + D + + +++S C ++G E A +Q+
Sbjct: 364 DNAVGFLDEMIAK-DTVSYSAIISGCVQNGYAEKALLIFRQM 404
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 37/285 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K KK+H H+IK+G+ D + +++ + G ++ A ++ + ++ II
Sbjct: 328 LKRGKKLHCHMIKSGMDLDTTVGNSLISM-YAKCGIMDNAVGFLDEMIAKDTVSYSAIIS 386
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G Q+ A+L+F M +S I P T +L A + L + G HG V +G
Sbjct: 387 GCVQNGYAEKALLIFRQM-QSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFT 445
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D I N II MY+ CG ++ +R +FD + D+++WN+MIIG
Sbjct: 446 NDTSICNAIIDMYSKCGKITISREIFDRMQNR-DIISWNTMIIGYG-------------- 490
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
I G EAL LF+E+Q +KP + T++++L+AC+ G + +G
Sbjct: 491 ------------IHGLC-----VEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEG 533
Query: 241 EWIHNFLVTNCFELNTIVVTAI--IDMYCKCGCPERALQVFNTVP 283
++ + + N F + + I +D+ + G + A +P
Sbjct: 534 KYWFSSMSQN-FNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMP 577
>gi|413937223|gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
Length = 625
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 154/395 (38%), Positives = 241/395 (61%), Gaps = 5/395 (1%)
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD-TEFDVVAWNSMIIGLAKCG 169
HG+ +K G + N ++ +Y G LS+AR +FD T D +WN+M+ G KCG
Sbjct: 139 HGQALKHGALAHPVVTNCLLKLYCALGMLSDARRVFDTSGATSLDAFSWNTMVSGYGKCG 198
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
+++ +R +F +M R VSW++MI +R +F EAL +F +M +P + S+L
Sbjct: 199 DLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPDAVVLSSVLK 258
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFEL---NTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
ACA LGA+ +G W+H FL N ++ TA++DMYCKCGC + A VF+ V +
Sbjct: 259 ACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVFDGVQSQD 318
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
+ WN+M+ GLAMNG+ A++LF + P+ +F+ VL AC H+G+V++ K+ F
Sbjct: 319 VVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNESTFVVVLCACTHTGRVDEGKEIFR 378
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI 406
M + + I+P +HY C+ D LGRAGLLEEAE ++ MP +P A WG+L+S+C H N+
Sbjct: 379 SMCD-HGIEPRREHYGCLADLLGRAGLLEEAEAVLLDMPMEPHASQWGALMSSCLMHNNV 437
Query: 407 EMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
+ ++ K++IEL+ ++ YV++ NLYA + +E+A R +M+E +KE G S IE
Sbjct: 438 GVGERVGKKLIELEPDDGGRYVVLFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIEW 497
Query: 467 DGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+G VHEF +G HP+ ++Y LL D+ +Q +G
Sbjct: 498 NGLVHEFRSGDTRHPQTRQIYALLEDMEQRLQLIG 532
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 123/291 (42%), Gaps = 39/291 (13%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+ A VF ++ + L W+ +I ++ A+ +F D ++ + +P + S+
Sbjct: 198 GDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMF-DQMMGNGFRPDAVVLSSV 256
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEF---DQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
KA A LG G +H + +GL + + ++ MY CG + EA +FD V +
Sbjct: 257 LKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDEAWWVFDGVQS 316
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ DVV WN+MI GLA N K ALELFR
Sbjct: 317 Q-DVVLWNAMIGGLAM-------------------------------NGHGKRALELFRR 344
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + P+E T V +L AC G + +G+ I + + E + D+ + G
Sbjct: 345 MLDMGFVPNESTFVVVLCACTHTGRVDEGKEIFRSMCDHGIEPRREHYGCLADLLGRAGL 404
Query: 272 PERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
E A V +P + S W +++ M + N + G + L+PD
Sbjct: 405 LEEAEAVLLDMPMEPHASQWGALMSSCLM--HNNVGVGERVGKKLIELEPD 453
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/502 (37%), Positives = 276/502 (54%), Gaps = 43/502 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSP-AGDINYAYL--VFTQIKKPNLFIW-N 56
++ L ++HA +K GLA P +R+L CT P AG + AY VF ++ P +W N
Sbjct: 38 LRTLAQLHAAAVKAGLAAHPALVTRLLTLCTGPDAGPAHLAYARQVFDRVPHPADAVWYN 97
Query: 57 TIIRGFSQSSTPRN-----AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLH 111
T++RG+++SS P + A+ +F+ ML + P T+ SL KA A +G Q H
Sbjct: 98 TLLRGYARSSNPSSSEAAAAVRVFVRMLEEG-VAPDTYTFVSLLKACAAARAGEEGRQAH 156
Query: 112 GRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
VK G ++ T+I MYA CG +AR
Sbjct: 157 ALAVKLGAADHDYVRPTLINMYAECG---DAR---------------------------- 185
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
+R +F VS+N+MI+ VR+ + EAL LFREMQ + +KP+ T++S+L+AC
Sbjct: 186 -AARVMFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSAC 244
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A LGA+ G W+H+++ V TA+IDMY KCG E A+ VF + K W+
Sbjct: 245 ALLGALELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWS 304
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
M+ A +GY EAI LF ++ +KPD I+F+ VL AC+HSG V++ YF M +
Sbjct: 305 VMIVAYANHGYGREAISLFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKD- 363
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ I P IKHY C+ D L R+G LE A K I +P +P I+W +LLSAC HG+ E+ K+
Sbjct: 364 HGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKR 423
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
++I++LD + YV+ SNL A + +EE R LM E + K PGCS IE+D VH
Sbjct: 424 VFERILKLDDSHGGDYVIFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCSSIEIDNTVH 483
Query: 472 EFVAGGRLHPKAPEVYLLLNDL 493
EF AG HPK+ E +++++
Sbjct: 484 EFFAGDGRHPKSQEARKMVDEV 505
>gi|413943789|gb|AFW76438.1| hypothetical protein ZEAMMB73_890738 [Zea mays]
Length = 529
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/464 (36%), Positives = 282/464 (60%), Gaps = 6/464 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+HA +KTG D A ++ T G + A VF ++ + L +WN ++R + +
Sbjct: 66 RKVHAAAVKTGFRWDAYTACSLMEMYTM-LGRADSARRVFDEMPQRFLVLWNMMMRCYIR 124
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ L + M + P R+T + A ++ G G ++H + F
Sbjct: 125 CGRFTAAVALAVQM-ESGGATPDRVTLVTAVTACSRAGDLNLGRRIHS-YMDGVFGFSLP 182
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MY G+L EA MF+++ E ++++W ++ G G++D++R F + +
Sbjct: 183 VANALLDMYTKNGYLEEAVKMFEQM-PERNIISWTILVSGYGIAGQLDKARVFFYQCTQK 241
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ + W SMI+ V++ F+EAL LFR+MQ Q ++P +FT+V+LL CA +GA+ QGEWIH
Sbjct: 242 DLILWTSMINACVQHGSFEEALILFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIH 301
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + +++ ++ TA+I+MY KCG +++LQ+F + K + W +++ GLA NG +
Sbjct: 302 QYAESRNMKIDAVLGTALIEMYSKCGHVDKSLQIFGRMQGKDAAAWTAIICGLATNGQAS 361
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A++LF +Q S KPD I+FI VL+AC H G V++ + YF M E Y I+P I+HYSC+
Sbjct: 362 KALELFEEMQRSKTKPDGITFIGVLSACCHGGLVDEGQRYFQAMKEVYHIEPRIEHYSCL 421
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAI-IWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
V+ LG AGLL EAEKLI MP + D + ++G+LL+AC+ +GN+EM++ K+I + D +
Sbjct: 422 VNLLGHAGLLYEAEKLITDMPVNNDTMPLFGALLTACKANGNVEMSEWLTKRIAKEDCSP 481
Query: 424 SCGY-VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
+ VLMSN+YA + ++EEA+ R M ++K GCS+IEV
Sbjct: 482 NPDVNVLMSNVYATASRWEEAIRVRSKMTNPAVKKTAGCSMIEV 525
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 36/266 (13%)
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
N +I R F + ++ +++ + + +T +L A + +G +H V
Sbjct: 15 NVLIRTLARRGSFSRVMAVYYDLRARGLAADSYTYPFVLRAIGTMKLSVEGRKVHAAAVK 74
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
F + ++++MY G + A +VF+ +P++ L WN M+ G A+ L
Sbjct: 75 TGFRWDAYTACSLMEMYTMLGRADSARRVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVAL 134
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
++S PD ++ + +TAC+ +G +N + + M + S+ + ++D
Sbjct: 135 AVQMESGGATPDRVTLVTAVTACSRAGDLNLGRRIHSYMDGVFGF--SLPVANALLDMYT 192
Query: 370 RAGLLEEAEKLIRSMP------------------------------SDPDAIIWGSLLSA 399
+ G LEEA K+ MP + D I+W S+++A
Sbjct: 193 KNGYLEEAVKMFEQMPERNIISWTILVSGYGIAGQLDKARVFFYQCTQKDLILWTSMINA 252
Query: 400 CRKHGNIEMA----KQAAKQIIELDK 421
C +HG+ E A + Q +E DK
Sbjct: 253 CVQHGSFEEALILFRDMQLQRVEPDK 278
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/471 (34%), Positives = 270/471 (57%), Gaps = 6/471 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+N A VF ++ +WN +I G+ QS +A LF M V+ + T+ S+
Sbjct: 248 GDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRM-VSEKVPLDEFTFTSV 306
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQ----FIHNTIIYMYANCGFLSEARLMFDEVD 150
A A G G +HG++++ F ++N ++ +Y+ G + A+ +FD ++
Sbjct: 307 LSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMN 366
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
+ DVV+WN+++ G G +D++ +F M +N +SW M+SGYV ++AL+LF
Sbjct: 367 LK-DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFN 425
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M+ +++KP ++T + AC +LGA++ G +H LV FE + A++ MY KCG
Sbjct: 426 QMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCG 485
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
A VF +P WN+M+ L +G+ EA++LF + + + PD ISF+ +LT
Sbjct: 486 AVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILT 545
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
ACNH+G V++ YF M + I P HY+ ++D LGR+G + EA LI++MP +P
Sbjct: 546 ACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTP 605
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
IW ++LS CR +G++E AA Q+ + Y+L+SN Y+A+ ++ +A R LM
Sbjct: 606 SIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLM 665
Query: 451 KEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ ++KEPGCS IEV ++H F+ G HP+A EVY L +G ++++G
Sbjct: 666 RDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLG 716
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 215/459 (46%), Gaps = 50/459 (10%)
Query: 9 AHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIK--KPNLFIWNTIIRGFSQSS 66
A L ++ P+AA+ ++A + AG + A F + + + + N ++ F+++S
Sbjct: 83 AALFRSDPDPGPVAATSLVA-AHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARAS 141
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG--LARDGAQLHGRVVKQGLEFDQF 124
A+ +F +L + ++P ++ +L A Q+ A QLH V+K G
Sbjct: 142 LAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLS 201
Query: 125 IHNTIIYMYANCGFLS---EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ N +I +Y C +AR + DE+ + D+ W +M++G + G+++ +R +F+++
Sbjct: 202 VSNALIALYMKCDTPEASWDARKVLDEMPDKDDLT-WTTMVVGYVRRGDVNAARSVFEEV 260
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+ V WN+MISGYV++ +A ELFR M + + EFT S+L+ACA G G+
Sbjct: 261 DGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGK 320
Query: 242 WIH--------NFLVTNCFELNTIVVT---------------------------AIIDMY 266
+H NF+ +N +VT I+ Y
Sbjct: 321 SVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGY 380
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
GC ++A++VF +P K W MV G G +A+KLF+ +++ ++KP ++
Sbjct: 381 IDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYA 440
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+ AC G + + + + + S + ++ + G + +A + MP
Sbjct: 441 GAIAACGELGALKHGRQLHAHLVQC-GFEASNSAGNALLTMYAKCGAVNDARLVFLVMP- 498
Query: 387 DPDAIIWGSLLSACRKHGN----IEMAKQAAKQIIELDK 421
+ D++ W +++SA +HG+ +E+ Q + I+ D+
Sbjct: 499 NLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDR 537
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 114/255 (44%), Gaps = 19/255 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K +++HAHL++ G A + +L + G +N A LVF + + WN +I
Sbjct: 452 LKHGRQLHAHLVQCGFEASNSAGNALLTM-YAKCGAVNDARLVFLVMPNLDSVSWNAMIS 510
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GL 119
Q R A+ LF D +V I P R+++ ++ A GL +G + + G+
Sbjct: 511 ALGQHGHGREALELF-DQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGI 569
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID----ESR 175
+ + +I + G + EAR + + E W +++ G G+++ +
Sbjct: 570 SPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAAD 629
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+LF +M+ ++ ++ + + Y ++ +A + + M+++ +K C+
Sbjct: 630 QLF-RMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEP--------GCSW-- 678
Query: 236 AIRQGEWIHNFLVTN 250
I G IH FLV +
Sbjct: 679 -IEVGSKIHVFLVGD 692
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/491 (34%), Positives = 279/491 (56%), Gaps = 33/491 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M++ K+ HA ++K GL D AS ++A C S G ++YA +F Q+ +P F +NT++
Sbjct: 1 MEEFKQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMM 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG + A++ + +M ++P TYP+L KA A+L +G Q+H ++K GL
Sbjct: 61 RGHVKDMNTEEALITYKEM-AERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGL 119
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D F+ N++I MY CG + +F++++ E V +W+++I A G + RL
Sbjct: 120 ENDVFVQNSLISMYGKCGEIGVCCAVFEQMN-ERSVASWSALITAHASLGMWSDCLRLLG 178
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M + GY R E +VS+L+AC LGA+
Sbjct: 179 DMSNE----------GYWR--------------------AEESILVSVLSACTHLGALDL 208
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G +H FL+ N LN IV T++I+MY KCG + + +F + KK ++ M+ GLAM
Sbjct: 209 GRSVHGFLLRNVSGLNVIVETSLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAM 268
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+GY E +++F+ + L+PD I ++ VL AC+H+G V + F M + I+P+I+
Sbjct: 269 HGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQ 328
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD +GRAG ++EA +LI+SMP +P+ ++W SLLSA + H N++ + AAKQ+ +L
Sbjct: 329 HYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKL 388
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D ++ YV++SN+YA + ++E+ R M + + PG SL+EV ++H FV+
Sbjct: 389 DSQKASDYVVLSNMYAQAQRWEDVARTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAG 448
Query: 480 HPKAPEVYLLL 490
HP++ VY +L
Sbjct: 449 HPQSESVYEML 459
>gi|212721478|ref|NP_001131178.1| uncharacterized protein LOC100192486 [Zea mays]
gi|194690792|gb|ACF79480.1| unknown [Zea mays]
Length = 617
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/506 (34%), Positives = 282/506 (55%), Gaps = 26/506 (5%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD--INYAYLVFTQIKKPNLFIWNTIIRG 61
L+ +HAHL+ +G P S + AF S A ++YA LV Q + L N IR
Sbjct: 22 LRALHAHLVVSGRLASP---SHLAAFLASLASSNHLSYARLVLPQ-RPATLLAHNAFIRA 77
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY--------------AQLGLARDG 107
++ P A F D+ P+ P + L +A A++
Sbjct: 78 LARGPRPCLAFAAFRDL----PLPPDHYSLNFLVRAATALVASAAEEKHVSAEVNARLQA 133
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
HG V+ G D + + ++ MYA G ++ +R F E+ DVV +M+ LA
Sbjct: 134 VSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACP-DVVCVTAMVAALAA 192
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
G++D +R LFD M R+ V+W++MI+GY+ + +EAL LF EM E T+VS+
Sbjct: 193 GGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSV 252
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
L ACA++G + +G+W+H ++ + +++ + TA++DMY KCG A++VF ++ ++ +
Sbjct: 253 LTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNV 312
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
W S V GLAMNG E ++LF ++ + ++P+ +SF+AVL C+ +G V++ + F
Sbjct: 313 YTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDS 372
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
M + Y + P +HY CMVD GRAG L++A I MP +P +WG+LL+A R H +++
Sbjct: 373 M-DKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVD 431
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
+ K A +++ ++ +V +SN+YA S ++ R +MK ++K PG S IEVD
Sbjct: 432 LGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVD 491
Query: 468 GEVHEFVAGGRLHPKAPEVYLLLNDL 493
G+VHEF GGRLHP+ E+ L+L ++
Sbjct: 492 GKVHEFYVGGRLHPRYNEIELMLAEM 517
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/501 (34%), Positives = 284/501 (56%), Gaps = 38/501 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
++ H ++K+GL D ++ A C + G ++ A VF ++ N+ W II G
Sbjct: 165 RQFHCLVMKSGLDLDVCVGCSLVDMYAKCVAD-GSVDDARKVFDRMPVHNVMSWTAIITG 223
Query: 62 FSQSS-TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ QS R AI LF++M V ++P T+ S+ KA A L G Q++ VVK L
Sbjct: 224 YVQSGGCDREAIELFLEM-VQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLA 282
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N++I MY+ +CG ++ +R+ FD
Sbjct: 283 SINCVGNSLISMYS--------------------------------RCGNMENARKAFDV 310
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ +N VS+N++++ Y +++ +EA ELF E++ + FT SLL+ + +GAI +G
Sbjct: 311 LFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKG 370
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
E IH+ ++ + F+ N + A+I MY +CG E A QVFN + + W SM+ G A +
Sbjct: 371 EQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKH 430
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ A++ F + + + P+ +++IAVL+AC+H G +++ +F M + I P ++H
Sbjct: 431 GFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEH 490
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+C+VD LGR+G LEEA +L+ SMP DA++ + L ACR HGN+++ K AA+ I+E D
Sbjct: 491 YACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQD 550
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
++ Y+L+SNL+A++ Q+EE E R MKE + KE GCS IEV+ +VH+F G H
Sbjct: 551 PHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSH 610
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+A E+Y L+ L L I+E+G
Sbjct: 611 PQAQEIYDELDQLALKIKELG 631
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 203/416 (48%), Gaps = 34/416 (8%)
Query: 5 KKIHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
K I L+KTG D ++ GD+ AY VF ++ N+ W +I F
Sbjct: 62 KIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQ 121
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
Q R+A+ LF+DM+++ + P R T + A A++GL G Q H V+K GL+ D
Sbjct: 122 QLGFSRDAVDLFLDMVLSGYV-PDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV 180
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ +++ MYA C G +D++R++FD+M
Sbjct: 181 CVGCSLVDMYAKC-----------------------------VADGSVDDARKVFDRMPV 211
Query: 184 RNTVSWNSMISGYVRNVKF-KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
N +SW ++I+GYV++ +EA+ELF EM + +KP+ FT S+L ACA L I GE
Sbjct: 212 HNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQ 271
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
++ +V V ++I MY +CG E A + F+ + +K L +N++V A +
Sbjct: 272 VYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLN 331
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
EA +LF+ ++ + + +F ++L+ + G + + + + + ++ K ++ +
Sbjct: 332 SEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKS-GFKSNLHICN 390
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
++ R G +E A ++ M D + I W S+++ KHG A + +++E
Sbjct: 391 ALISMYSRCGNIEAAFQVFNEM-GDGNVISWTSMITGFAKHGFATRALETFHKMLE 445
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 119/241 (49%), Gaps = 9/241 (3%)
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ VSW+++IS Y N K EA+ F +M E P+E+ + AC+ I G+ I
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 244 HNFLV-TNCFELNTIVVTAIIDMYCKC-GCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
FL+ T FE + V A+IDM+ K G E A +VF+ +P + + W M+ G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ +A+ LF + S PD + V++AC G ++ + + L+ ++ + +
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKS-GLDLDVCVG 183
Query: 362 SCMVDALGRA---GLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+VD + G +++A K+ MP + + W ++++ + G + ++A + +E
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAIITGYVQSGGCD--REAIELFLE 240
Query: 419 L 419
+
Sbjct: 241 M 241
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
K+ L W++++ A N EAI F + P+ F V AC++ ++ K
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRA-GLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
F + +T + + ++D + G LE A K+ MP D + + W +++ ++
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP-DRNVVTWTLMITRFQQ 122
Query: 403 HG 404
G
Sbjct: 123 LG 124
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 277/490 (56%), Gaps = 2/490 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++L++IHA + GL + + S + + G A +F +I P++ + +++
Sbjct: 33 IRELQRIHAQALTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDIISFTSLMS 92
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ AI +F + S +P A LG R G+ +HG + + GL+
Sbjct: 93 LHLKLDHHWKAISVF-SHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLIFRCGLD 151
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ + N ++ MY CG AR +FD + + D V W SM+ G KC +D + F +
Sbjct: 152 SELVVCNALVDMYCRCGKFEPARTVFDRMLVK-DEVTWGSMLYGYMKCVGVDSALSFFYQ 210
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M ++TVSW ++I+G+V++ + +ALELF +M + +P+ T+V +L+ACA +GA+ G
Sbjct: 211 MPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGALDLG 270
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
IH + + N IV A++DMY K G A VF V K W +M+ +
Sbjct: 271 RAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQ 330
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G +A++LF + S + P+ ++F++VL+AC+H+G + + ++ F M E Y I P ++H
Sbjct: 331 GNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEH 390
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGR GLLEEAE LI M +PD +IW SLLSAC HGN +A+ A K+II+ +
Sbjct: 391 YGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAGKEIIKRE 450
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ YVL+ N+YA S +++EA++ R M KI K+PGCS IEVDG VHEF+ + H
Sbjct: 451 PGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEVDGVVHEFLVEDKSH 510
Query: 481 PKAPEVYLLL 490
E+Y+ L
Sbjct: 511 DARREIYVTL 520
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 232/360 (64%), Gaps = 1/360 (0%)
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D + ++++ +Y CG +++AR +FDE+ DVVAWN MI G K G+ +R LFD M
Sbjct: 112 DAHVSSSLVQLYCTCGHVADARSVFDEMAVR-DVVAWNVMIAGYVKAGDQAHARELFDAM 170
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
RN VSW ++I GY + + ++A+E+FR MQ + I+ ++S+L AC LGA+ GE
Sbjct: 171 PERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGE 230
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
W+H F+V ++ +IIDMY KCGC E+A++VF + +K + W +++ G A++G
Sbjct: 231 WVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHG 290
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+A+++F ++ N+ P+ ++F+A+L+AC+H G + + YF +M Y+IKP ++HY
Sbjct: 291 LGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHY 350
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD LGRAG L+EA+ L+++MP +A IWG+LL+A R HG+ + +QA +IEL+
Sbjct: 351 GCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALLHLIELEP 410
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
N S Y+L+SN++A ++ + + R M+E + PG S IEVDG VHEF + HP
Sbjct: 411 NNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASSIEVDGMVHEFTSRDWSHP 470
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 158/329 (48%), Gaps = 43/329 (13%)
Query: 1 MKDLKKIHAHLIK-------------TG-LAKDP-IAASRILAFCTSPAGDINYAYLVFT 45
++D+ ++ HL++ TG +A D +++S + +CT G + A VF
Sbjct: 80 LRDVARLPPHLLRRSLLGQLHSLLLRTGHVASDAHVSSSLVQLYCT--CGHVADARSVFD 137
Query: 46 QIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGL 103
++ ++ WN +I G+ ++ +A LF M P+R +++ ++ YAQ+
Sbjct: 138 EMAVRDVVAWNVMIAGYVKAGDQAHARELFDAM-------PERNVVSWTTVIGGYAQMKR 190
Query: 104 ARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF--------DV 155
++ R+ +G+E D ++ + A CG L L E F ++
Sbjct: 191 PEKAVEVFRRMQVEGIEADGV---ALLSVLAACGDLGAVDL--GEWVHRFVVRRGLCQEI 245
Query: 156 VAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ 215
NS+I KCG I+++ +F+ M ++ V+W ++I+G+ + +A+E+F M+ +
Sbjct: 246 PLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFCRMERE 305
Query: 216 NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCPE 273
N+ P+ T +++L+AC+ +G G W N +V+ + + V ++D+ + GC +
Sbjct: 306 NMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQ-YRIKPRVEHYGCMVDLLGRAGCLK 364
Query: 274 RALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
A + +P K + W +++ +G
Sbjct: 365 EAQDLVKNMPLKANAAIWGALLAAARTHG 393
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 302/560 (53%), Gaps = 77/560 (13%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPN--LFIWNTI 58
+ L+++HA L+K GL DP+AAS++L+ + + + VF P+ F+ NT+
Sbjct: 37 LHHLQELHAQLLKHGLHLDPVAASKLLS-SYALHRRLPASRGVFASFPNPHATTFLPNTL 95
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+R ++ ++ PR A+ +F M P R TY L KA + G+A A +H VVK
Sbjct: 96 LRAYALNALPREAVAVFSAM-------PHRDSFTYSFLIKALSSAGVAPLRA-VHSHVVK 147
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEA-------------------------------RLM 145
G D ++ N +I Y+ G S+A R M
Sbjct: 148 LGSIEDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVEGARRM 207
Query: 146 FDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR------- 198
FDE+ E D V+WN+++ G K G+++E+ +LF M RN VSW++++SGY +
Sbjct: 208 FDEM-LEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMA 266
Query: 199 ------------------------NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
N +EA +LF +M+E +++ +VS+L ACA+
Sbjct: 267 RVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAACAES 326
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT-VPKKGLSCWNSM 293
G++ G+ IH ++ T +T V A+IDM+CKCGC RA VF+T + +K WN++
Sbjct: 327 GSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDSVSWNTI 386
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ G AM+G+ ++A+ F+ ++ PD ++ I VL+AC H G V + + YF M Y
Sbjct: 387 IGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYFANMERDYG 446
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
+ P I+HY CM+D LGR GL++EA LI+SMP DP+ +IWGSLLSACR H N+E A+ A
Sbjct: 447 VVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAV 506
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
++ +L + + Y ++S++YA + ++ + + R+ MK +K G S IE+D HEF
Sbjct: 507 NELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKSSGSSWIELDEAFHEF 566
Query: 474 VAGGRLHPKAPEVYLLLNDL 493
G R HP + ++ +++ L
Sbjct: 567 TVGDRKHPDSDQISEMVDRL 586
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 271/481 (56%), Gaps = 3/481 (0%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H ++K G + +L S AG + + F ++ N+ WN++I G++Q+
Sbjct: 133 HGVVVKLGFVGQVFVGNALLHSYAS-AGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGN 191
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
R A LF M + + T SL A + G G +H ++ +G D + N
Sbjct: 192 TREACSLFEGMRRQGLLADE-FTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILAN 250
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
++ MY CG L A FD + + + V+W SM+ LAK ID +R F+++ ++ +
Sbjct: 251 ALVDMYGKCGDLLMAHTCFDMMPFK-NAVSWTSMLCALAKRASIDAARDWFEQIPEKSII 309
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
SWN+MIS YV+ +F EAL+L+ M+ + P EFT+ ++L+AC +LG + G+ IH+ +
Sbjct: 310 SWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCI 369
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
N + +++DMY +CG + A+ +F+ +P K + WN+++ LAM+G +A+
Sbjct: 370 RDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDAL 429
Query: 308 KLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
F + PD I+F+A+L+ACNH G + + YF M Y +KP ++HY+CMVD
Sbjct: 430 MFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDL 489
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGY 427
LGR G L +A LI+ MP PD ++WG+LL ACR HG+I++ KQ KQ++EL+ +
Sbjct: 490 LGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLF 549
Query: 428 VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
VL+SN+ ++Q+E+ R LM+E ++K G S IE + +HE A G H + ++Y
Sbjct: 550 VLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHESGAEGIGHESSDDMY 609
Query: 488 L 488
+
Sbjct: 610 V 610
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 205/438 (46%), Gaps = 69/438 (15%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTIIRGF 62
L ++HAHL+ G+ D + + + ++C PAG + YA +F +I P+ F++N++IR +
Sbjct: 28 LNQLHAHLVVHGV--DDVTSQILASYCALPAGGGVWYARQLFDRIPDPDRFVYNSLIRAY 85
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
S P+ A+ L M + I P T P L KA A++ HG VVK G
Sbjct: 86 CNSHCPQEALPLLRGM-IRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQ 144
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ N +++ YA+ G L ++R FDE+ + +VV+WNSMI G A+ G
Sbjct: 145 VFVGNALLHSYASAGSLGDSRRFFDEM-VDRNVVSWNSMINGYAQAG------------- 190
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
NT +EA LF M+ Q + EFT+VSLL AC+ G + G+
Sbjct: 191 --NT----------------REACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKL 232
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCG------------------------CP------ 272
+H+ L+ ++ I+ A++DMY KCG C
Sbjct: 233 VHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRAS 292
Query: 273 -ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ A F +P+K + WN+M+ G +EA+ L++ ++ L PD + AVL+A
Sbjct: 293 IDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSA 352
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C G + K + + + P + ++ ++D R G ++ A L MPS + I
Sbjct: 353 CGQLGDLASGKMIHDCIRDNFH-NPGVALFNSLLDMYARCGQVDTAISLFSEMPSK-NVI 410
Query: 392 IWGSLLSACRKHGNIEMA 409
W +++ A HG + A
Sbjct: 411 SWNAIIGALAMHGRAQDA 428
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 149/319 (46%), Gaps = 9/319 (2%)
Query: 165 LAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
L G + +R+LFD++ + +NS+I Y + +EAL L R M + I P+EFT+
Sbjct: 54 LPAGGGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTL 113
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
LL ACA++ A H +V F V A++ Y G + + F+ +
Sbjct: 114 PFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVD 173
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
+ + WNSM+ G A G EA LF G++ L D + +++L AC+ G + K
Sbjct: 174 RNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLV 233
Query: 345 FT-LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
+ L+ +I + + +VD G+ G L A MP +A+ W S+L A K
Sbjct: 234 HSHLLVRGCRIDLILA--NALVDMYGKCGDLLMAHTCFDMMPFK-NAVSWTSMLCALAKR 290
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME--ERLLMKEVKIEKEPGC 461
+I+ A+ +QI E + M + Y +F EA++ R+ + + ++
Sbjct: 291 ASIDAARDWFEQIPE---KSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLA 347
Query: 462 SLIEVDGEVHEFVAGGRLH 480
+++ G++ + +G +H
Sbjct: 348 AVLSACGQLGDLASGKMIH 366
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/500 (36%), Positives = 279/500 (55%), Gaps = 42/500 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +HAHL+ GLA+ A+++++F T G ++ A +F +I N+ W + ++
Sbjct: 47 RALHAHLVIIGLARLTYFAAKLMSFYTE-CGQLSNARKLFDKIPNTNIRRWIVLTGACAR 105
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ F +M ++P + PS+ KA L R G +H ++K E D +
Sbjct: 106 RGFYEEALSAFSEMQ-KEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAY 164
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM--- 181
I + +IYMY+ CG + +A +FD + + D+V N+M+ G A+ G + E+ L KM
Sbjct: 165 IISALIYMYSKCGHVEKACRVFDWI-VDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQA 223
Query: 182 ------VSRNT------------------------------VSWNSMISGYVRNVKFKEA 205
VS NT VSW S+ISG+V+N E
Sbjct: 224 GVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEG 283
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
+ F+EM +Q PS T+ SLL AC + +R G+ IH + + E + V +A++DM
Sbjct: 284 FDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDM 343
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y KCG A +F +P++ WNS++FG A +GY NEAI+LF+ ++ S+ K D+++F
Sbjct: 344 YAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTF 403
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
AVL AC+H+G V + F M E Y+I+P ++HY+CMVD LGRAG L EA LI++MP
Sbjct: 404 TAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMP 463
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+PD +WG+LL ACR HGNIE+A+ AA+ + EL+ +L+SNLYA + ++ A +
Sbjct: 464 VEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAK 523
Query: 446 ERLLMKEVKIEKEPGCSLIE 465
+ +MK+ K K PGCS IE
Sbjct: 524 MKKMMKQRKFGKFPGCSWIE 543
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 153/345 (44%), Gaps = 36/345 (10%)
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
N ++ ++ Q TY YA+ G LH +V GL + +
Sbjct: 9 NVYRVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKL 68
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 189
+ Y CG LS AR +LFDK+ + N W
Sbjct: 69 MSFYTECGQLSNAR--------------------------------KLFDKIPNTNIRRW 96
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
+ R ++EAL F EMQ++ ++P++F + S+L AC L R GE +H ++
Sbjct: 97 IVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILK 156
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
N FE + +++A+I MY KCG E+A +VF+ + K L N+MV G A +G+ +EA+ L
Sbjct: 157 NSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNL 216
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
+Q + +KP+ +S+ ++ + G + + F LMT ++P + ++ ++
Sbjct: 217 VQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTAN-GVEPDVVSWTSVISGFV 275
Query: 370 RAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIEMAKQ 411
+ E + M P ++ SLL AC N+ K+
Sbjct: 276 QNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKE 320
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 266/490 (54%), Gaps = 34/490 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH + + G A+ +L G + A LVF + N+ WNT+I G++Q
Sbjct: 263 RSIHGYAFRAGFEYMVNVATAMLD-TYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQ 321
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A F+ ML ++P ++ A A LG LE ++
Sbjct: 322 NGESEEAFATFLKML-DEGVEPTNVSMMGALHACANLG---------------DLERGRY 365
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+H + DE FDV NS+I +KC +D + +F + +
Sbjct: 366 VHR-----------------LLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHK 408
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
V+WN+MI GY +N EAL LF EMQ +IKP FT+VS++ A A L RQ +WIH
Sbjct: 409 TVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIH 468
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + N V TA+ID + KCG + A ++F+ + ++ + WN+M+ G NG+
Sbjct: 469 GLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGR 528
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+ LF+ +Q+ ++KP+ I+F++V+ AC+HSG V + YF M E Y ++P++ HY M
Sbjct: 529 EALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAM 588
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L++A K I+ MP P + G++L ACR H N+E+ ++ A ++ +LD ++
Sbjct: 589 VDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDG 648
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
+VL++N+YA++ +++ R M++ I+K PGCSL+E+ EVH F +G HP++
Sbjct: 649 GYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSK 708
Query: 485 EVYLLLNDLG 494
+Y L LG
Sbjct: 709 RIYAYLETLG 718
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 202/441 (45%), Gaps = 77/441 (17%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IH +I G + A + ++ + I AY +F ++ + +L WNT++ G++Q
Sbjct: 162 REIHGMVITNGFQSNLFAMTAVVNL-YAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQ 220
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ R A+ + + M +P +T S+ A A L R G +HG + G E+
Sbjct: 221 NGFARRAVQVVLQMQEAGQ-KPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEY--- 276
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
++ A M +DT F KCG + +R +F M SR
Sbjct: 277 -------------MVNVATAM---LDTYF-------------KCGSVRSARLVFKGMSSR 307
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSWN+MI GY +N + +EA F +M ++ ++P+ +M+ L+ACA LG + +G ++H
Sbjct: 308 NVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVH 367
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
L + V+ ++I MY KC + A VF + K + WN+M+ G A NG N
Sbjct: 368 RLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVN 427
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTAC-------------------------------- 332
EA+ LF +QS ++KPD + ++V+TA
Sbjct: 428 EALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALI 487
Query: 333 -NHS--GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS--- 386
H+ G + A+ F LM E + I ++ M+D G G EA L M +
Sbjct: 488 DTHAKCGAIQTARKLFDLMQERHVIT-----WNAMIDGYGTNGHGREALDLFNEMQNGSV 542
Query: 387 DPDAIIWGSLLSACRKHGNIE 407
P+ I + S+++AC G +E
Sbjct: 543 KPNEITFLSVIAACSHSGLVE 563
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 167/351 (47%), Gaps = 36/351 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K+L +I +IK G + + +++++ FC I A VF ++ +++T++
Sbjct: 57 LKELHQILPLIIKNGFYNEHLFQTKLISLFC--KFNSITEAARVFEPVEHKLDVLYHTML 114
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+G++++ST R+A+ F + + + P + L + + R G ++HG V+ G
Sbjct: 115 KGYAKNSTLRDAVR-FYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGF 173
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ + F ++ +YA C + +A MF+ + + D+V+WN
Sbjct: 174 QSNLFAMTAVVNLYAKCRQIEDAYKMFERM-PQRDLVSWN-------------------- 212
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
++++GY +N + A+++ +MQE KP T+VS+L A A L A+R
Sbjct: 213 -----------TVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRI 261
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G IH + FE V TA++D Y KCG A VF + + + WN+M+ G A
Sbjct: 262 GRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQ 321
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
NG EA F + ++P +S + L AC + G + + + L+ E
Sbjct: 322 NGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDE 372
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 122/247 (49%), Gaps = 10/247 (4%)
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
K I E+ R+F+ + + V +++M+ GY +N ++A+ + M+ + P +
Sbjct: 88 KFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTY 147
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
LL + +R+G IH ++TN F+ N +TA++++Y KC E A ++F +P++
Sbjct: 148 LLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRD 207
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
L WN++V G A NG+ A+++ +Q + KPD I+ ++VL A + +
Sbjct: 208 LVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRS--- 264
Query: 347 LMTETYKIKPSIKHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
Y + ++ + M+D + G + A + + M S + + W +++ +
Sbjct: 265 --IHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGM-SSRNVVSWNTMIDGYAQ 321
Query: 403 HGNIEMA 409
+G E A
Sbjct: 322 NGESEEA 328
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
LL C L + Q I ++ N F + T +I ++CK A +VF V K
Sbjct: 50 LLELCTSLKELHQ---ILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKL 106
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
+++M+ G A N +A++ + ++ + P F +L + + + ++
Sbjct: 107 DVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHG 166
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI 406
M T + ++ + +V+ + +E+A K+ MP D + W ++++ ++G
Sbjct: 167 -MVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQ-RDLVSWNTVVAGYAQNGFA 224
Query: 407 EMAKQAAKQIIE 418
A Q Q+ E
Sbjct: 225 RRAVQVVLQMQE 236
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 291/509 (57%), Gaps = 39/509 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYA--------YLVFTQIKKPNL 52
+ L +IHA ++KTGL +P+ ++ + +S I+YA + T +
Sbjct: 31 LSKLTQIHAFILKTGLQNNPLILTKFTS-TSSNLNSIHYATSFLFPPSHTTSTPTPSYDA 89
Query: 53 FIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHG 112
F++NT+IR +SQ+ ++ LF ++ + P + T+P + K A +G R G +HG
Sbjct: 90 FLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHG 149
Query: 113 RVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID 172
VVK G E D + NT+I+MY G E EF
Sbjct: 150 CVVKFGFEEDVHVLNTLIHMYCCLG----------EDGFEF------------------- 180
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
+ ++FD +TV+W++MI+G+VR A++LFREMQ + P E TMVS+L+ACA
Sbjct: 181 -AEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACA 239
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
LGA+ G+W+ +++ + + A+IDM+ KCG ++A+++F + + + W S
Sbjct: 240 DLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTS 299
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
++ GLAM+G +A+ LF + + + PD ++FI VL+AC+HSG V++ + YF M +
Sbjct: 300 VIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNF 359
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
I P ++HY CMVD L R G ++EA + ++ MP +P+ IIW ++++AC G +++ +
Sbjct: 360 SIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQIIWRTIITACHATGELKLGESI 419
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
+K++I+ + YVL+SN+YA Q+E+ + R +M ++K PG ++IEV+ E++E
Sbjct: 420 SKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYE 479
Query: 473 FVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
FVAG + H + E+Y +++++G I++ G
Sbjct: 480 FVAGDKSHDQYKEIYEMVDEMGREIKKAG 508
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/531 (32%), Positives = 299/531 (56%), Gaps = 36/531 (6%)
Query: 5 KKIHAHLIKTGL-AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPN------------ 51
KK+H+ ++K GL A P+A S + + + GD+ A +VF ++K N
Sbjct: 127 KKVHSFVVKLGLHACVPVANSLLNMYAKT--GDLKMAKVVFDRMKLRNTSSWNAMISLHM 184
Query: 52 -------------------LFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYP 92
+ WN++I G +Q A+ F +L + ++P R +
Sbjct: 185 NCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLA 244
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD-T 151
S A A L G Q+HG +V+ + + N +I MYA G + AR + ++ +
Sbjct: 245 SALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGIS 304
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ DV+A+ +++ G K G+I +R++F+ + + V+W +MI GYV+N +A+E+F+
Sbjct: 305 DLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKT 364
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + +P+ FT+ ++L+A + + ++ G+ IH + + L+ V A+ MY K G
Sbjct: 365 MVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGS 424
Query: 272 PERALQVFNTVPK-KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
A +VFN + + + W SM+ LA +G EAI+LF + + +KPD+I+++ VL+
Sbjct: 425 INGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLS 484
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC H G V Q + YF LM +KI P++ HY+CMVD GRAGLL+EA K + +MP +PD
Sbjct: 485 ACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDV 544
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
I WGSLLS+C+ + N+++AK AA++++ ++ N S Y ++N+Y++ ++++A + R LM
Sbjct: 545 IAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLM 604
Query: 451 KEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
K ++KE G S +++ + H F LHP+ E+Y +++ + I++MG
Sbjct: 605 KARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMG 655
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 179/333 (53%), Gaps = 39/333 (11%)
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE--VDTEFDVVAWNSMIIGLAKCGEI 171
+VK GL F ++ N ++ +YA GF +A +F+E V T F +WN+++ G AK G++
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTF---SWNTILSGYAKQGKL 57
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
+++ ++FD + R++VSW ++I GY + +F++A+++F +M + + P++FT+ ++L +C
Sbjct: 58 EKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASC 117
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK----------------------- 268
A G+ G+ +H+F+V V ++++MY K
Sbjct: 118 AATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWN 177
Query: 269 --------CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG-LQSSNLK 319
CG + AL F + ++ + WNSM+ G +G++NEA++ FS L+ ++LK
Sbjct: 178 AMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLK 237
Query: 320 PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
PD S + L+AC + K++ K + T S + ++ ++G +E A +
Sbjct: 238 PDRFSLASALSACANLEKLSFGKQIHGYIVRTM-FDASGAVGNALISMYAKSGGVEIARR 296
Query: 380 LI-RSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+I +S SD D I + +LL+ K G+I A+Q
Sbjct: 297 IIEQSGISDLDVIAFTALLNGYVKLGDITPARQ 329
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/501 (34%), Positives = 294/501 (58%), Gaps = 10/501 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H H I GL D + ++ F + GD++ A VF ++ + N +I G+S+
Sbjct: 105 KQVHCHAIVRGLLGDIFVQTALVDF-YAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSK 163
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S A LF M ++ ++ S+ YA G ++ +L R++ +G +
Sbjct: 164 SGDVVKARRLFDGM-----VRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAI 218
Query: 125 IHNTIIYMYANCGFLSE---ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
T+ + A G L AR + E D + +++ +++ KC IDE+RR FD+M
Sbjct: 219 TIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCQAIDEARREFDRM 277
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ V+W++MI+GY +N + E+LELF M+ + KP+E T+V +L+ACA+LG+ G
Sbjct: 278 QQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGG 337
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
I + + + L + + +A+IDMY KCG RA VFN + K + WNSM+ GLA+NG
Sbjct: 338 QIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNG 397
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ +AI L+ + +++P+ I+F+A+LTAC H+G V+Q +F M + + P ++H
Sbjct: 398 FAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHC 457
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+C+VD L ++G L EA K I M +P+A+IW +LLSACR H ++E+AK AA +++ L+
Sbjct: 458 ACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEP 517
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ S YVL+SN+YA + + + E R LM+ ++K S IE+DGEVH+F+ HP
Sbjct: 518 DNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTYHP 577
Query: 482 KAPEVYLLLNDLGLLIQEMGS 502
K+ E++ +++ +GL + ++ S
Sbjct: 578 KSAEIFNVVDGMGLHLDDVDS 598
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 199/397 (50%), Gaps = 5/397 (1%)
Query: 24 SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSP 83
+R L S A A +F + +P + T+I S+ + + + F +
Sbjct: 22 TRPLHDLLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGS 81
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR 143
P P + K+ A L +R G Q+H + +GL D F+ ++ YA G + A
Sbjct: 82 DVPPGCV-PLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAV 140
Query: 144 LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+FDE+ + D + N +I G +K G++ ++RRLFD MV R + SWNSMI+ Y +++
Sbjct: 141 KVFDEMPVK-DPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQ 199
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
EAL LFR M + +P+ T+ ++ + CAK G + G+W + + + N IV TA++
Sbjct: 200 EALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALM 258
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
+MY KC + A + F+ + ++ + W++M+ G A NG +E+++LF +++++ KP+ +
Sbjct: 259 EMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEV 318
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+ + VL+AC G ++ E+ + + S ++D + G + A +
Sbjct: 319 TLVGVLSACAQLGS-DELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNR 377
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
M I W S++ +G + A K++ E D
Sbjct: 378 MEHKV-VITWNSMMRGLALNGFAQDAITLYKEMTEED 413
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 43/284 (15%)
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ--NIKPSEFTMVSLLNAC 231
+R LFD + ++IS R +E L+ F + + ++ P +V + +C
Sbjct: 38 ARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLV--VKSC 95
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A L A RQG+ +H + + V TA++D Y K G + A++VF+ +P K N
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMN 155
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
++ G + +G +A +LF G+ ++ S+ +++ H G+ +A F M
Sbjct: 156 CLITGYSKSGDVVKARRLFDGM----VRRTSASWNSMIACYAHGGEYQEALRLFRRM--- 208
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
L E + P+AI ++ S C K G++E K
Sbjct: 209 ----------------------LSEGAR--------PNAITIATMFSICAKTGDLETGKW 238
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE--RLLMKEV 453
A I E D + + +Y +EA E R+ ++V
Sbjct: 239 ARSLIAEQDLQNMIVHTALMEMYVKCQAIDEARREFDRMQQRDV 282
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 294/533 (55%), Gaps = 32/533 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL---AFCTSP------------------------ 33
M+ KK+H+ ++K GL + ++ +L A C P
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 34 ---AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLT 90
G ++ A F Q+ + ++ WN++I GF+Q A+ +F ML S + P R T
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
S+ A A L G Q+H +V G + + N +I MY+ CG + AR + ++
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 151 T-EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
T + + + +++ G K G++++++ +F + R+ V+W +MI GY ++ + EA+ LF
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
R M +P+ +T+ ++L+ + L ++ G+ IH V + + V A+I MY K
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 270 GCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G A + F+ + ++ W SM+ LA +G+ EA++LF + L+PD+I+++ V
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
+AC H+G VNQ + YF +M + KI P++ HY+CMVD GRAGLL+EA++ I MP +P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D + WGSLLSACR H NI++ K AA++++ L+ S Y ++NLY+A ++EEA + R
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
MK+ +++KE G S IEV +VH F HP+ E+Y+ + + I++MG
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 694
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 171/343 (49%), Gaps = 40/343 (11%)
Query: 104 ARDGAQL-HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
R AQL H RV+K GL F ++ N ++ +Y+ G+ AR +FDE+ +WN+++
Sbjct: 29 GRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR-TAFSWNTVL 87
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
+K G++D + FD++ R++VSW +MI GY ++ +A+ + +M ++ I+P++F
Sbjct: 88 SAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQF 147
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP---------- 272
T+ ++L + A + G+ +H+F+V N V ++++MY KCG P
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 273 ---------------------ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
+ A+ F + ++ + WNSM+ G GY+ A+ +FS
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 312 G-LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT-LMTETYKIKPSIKHYSCMVDALG 369
L+ S L PD + +VL+AC + K+ K + ++T + I + + ++
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV--LNALISMYS 325
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWG--SLLSACRKHGNIEMAK 410
R G +E A +LI + D I G +LL K G++ AK
Sbjct: 326 RCGGVETARRLIEQRGT-KDLKIEGFTALLDGYIKLGDMNQAK 367
>gi|225452893|ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Vitis vinifera]
Length = 632
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 180/495 (36%), Positives = 291/495 (58%), Gaps = 10/495 (2%)
Query: 5 KKIHAHLIKTGLAKDP--IAASRILAFCTSPAGDINYAYLVFTQI--KKPNLFIWNTIIR 60
+++HA +I TG+A P + +L F S G A VF +I + W T++
Sbjct: 33 ERLHATIITTGIAGAPETFLHNALLQFYAS-CGCAWQARKVFDEIPHSHKDTVDWTTLMG 91
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
F + + A+L+F++M ++P +T LF A+LG GAQ HG +VK GL
Sbjct: 92 CFVRHNVSDEALLIFVEMRRCG-VKPDEVTLVCLFGGCARLGDVVVGAQGHGCMVKMGLG 150
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N ++ MYA G + EAR +F E+ + VV+W ++ G+ + + R +FD+
Sbjct: 151 GVEKACNAVMDMYAKSGLMGEARRVFYEMKGQ-SVVSWTVILDGVIRSEGVRNGRVVFDE 209
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQ 239
M RN V+W MI+GY+ + +E+ L REM + ++ + T+ S+L AC++ G +
Sbjct: 210 MPERNEVAWTIMIAGYLDSGLTQESFALVREMIFDLEMELNYVTLCSILTACSQSGDLMM 269
Query: 240 GEWIHNF-LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G W+H + L T ELN +V TA++DMY KCG A + F +P++ + WN+M+ GLA
Sbjct: 270 GRWVHAYALKTKEKELNIMVGTAMVDMYAKCGRIHIAFKFFKKMPQRNVVSWNAMLSGLA 329
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
M+G A+ +F + KPD ++F +VL+AC+HSG V+Q YF + Y I P +
Sbjct: 330 MHGLGRAALDIFPQM-FKEAKPDDVTFTSVLSACSHSGLVDQGCFYFGNLESVYGITPKV 388
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY+CMVD LGRAG LEEAE L+R MP P+ ++ GSLL +C HG +++ + +++++
Sbjct: 389 EHYACMVDLLGRAGRLEEAEILVREMPIRPNEVVLGSLLGSCSIHGKLQLGEHLLQELVQ 448
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD + ++L+SN+YA + + A R ++K+ I+K PG S I V G+VH+F AG +
Sbjct: 449 LDPQNTEYHILLSNMYALAGKQNRANSLRQVLKKRGIKKVPGMSSIHVGGQVHQFSAGDK 508
Query: 479 LHPKAPEVYLLLNDL 493
HP+ EVY +L+++
Sbjct: 509 SHPRTREVYNMLDEM 523
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/501 (34%), Positives = 294/501 (58%), Gaps = 10/501 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H H I GL D + ++ F + GD++ A VF ++ + N +I G+S+
Sbjct: 105 KQVHCHAIVRGLLGDIFVQTALVDF-YAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSK 163
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S A LF M ++ ++ S+ YA G ++ +L R++ +G +
Sbjct: 164 SGDVVKARRLFDGM-----VRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAI 218
Query: 125 IHNTIIYMYANCGFLSE---ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
T+ + A G L AR + E D + +++ +++ KC IDE+RR FD+M
Sbjct: 219 TIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKCRAIDEARREFDRM 277
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ V+W++MI+GY +N + E+LELF M+ + KP+E T+V +L+ACA+LG+ G
Sbjct: 278 QQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGG 337
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
I + + + L + + +A+IDMY KCG RA VFN + K + WNSM+ GLA+NG
Sbjct: 338 QIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNG 397
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ +AI L+ + +++P+ I+F+A+LTAC H+G V+Q +F M + + P ++H
Sbjct: 398 FAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHC 457
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+C+VD L ++G L EA K I M +P+A+IW +LLSACR H ++E+AK AA +++ L+
Sbjct: 458 ACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEP 517
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ S YVL+SN+YA + + + E R LM+ ++K S IE+DGEVH+F+ HP
Sbjct: 518 DNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTYHP 577
Query: 482 KAPEVYLLLNDLGLLIQEMGS 502
K+ E++ +++ +GL + ++ S
Sbjct: 578 KSAEIFNVVDGMGLHLDDVDS 598
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 199/397 (50%), Gaps = 5/397 (1%)
Query: 24 SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSP 83
+R L S A A +F + +P + T+I S+ + + + F +
Sbjct: 22 TRPLHDLLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGS 81
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR 143
P P + K+ A L +R G Q+H + +GL D F+ ++ YA G + A
Sbjct: 82 DVPPGCV-PLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAV 140
Query: 144 LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+FDE+ + D + N +I G +K G++ ++RRLFD MV R + SWNSMI+ Y +++
Sbjct: 141 KVFDEMPVK-DPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQ 199
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
EAL LFR M + +P+ T+ ++ + CAK G + G+W + + + N IV TA++
Sbjct: 200 EALRLFRRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALM 258
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
+MY KC + A + F+ + ++ + W++M+ G A NG +E+++LF +++++ KP+ +
Sbjct: 259 EMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEV 318
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+ + VL+AC G ++ E+ + + S ++D + G + A +
Sbjct: 319 TLVGVLSACAQLGS-DELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNR 377
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
M I W S++ +G + A K++ E D
Sbjct: 378 MEHKV-VITWNSMMRGLALNGFAQDAITLYKEMTEED 413
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 43/284 (15%)
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ--NIKPSEFTMVSLLNAC 231
+R LFD + ++IS R +E L+ F + + ++ P +V + +C
Sbjct: 38 ARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLV--VKSC 95
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A L A RQG+ +H + + V TA++D Y K G + A++VF+ +P K N
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMN 155
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
++ G + +G +A +LF G+ ++ S+ +++ H G+ +A F M
Sbjct: 156 CLITGYSKSGDVVKARRLFDGM----VRRTSASWNSMIACYAHGGEYQEALRLFRRM--- 208
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
L E + P+AI ++ S C K G++E K
Sbjct: 209 ----------------------LSEGAR--------PNAITIATMFSICAKTGDLETGKW 238
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE--RLLMKEV 453
A I E D + + +Y +EA E R+ ++V
Sbjct: 239 ARSLIAEQDLQNMIVHTALMEMYVKCRAIDEARREFDRMQQRDV 282
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/567 (32%), Positives = 297/567 (52%), Gaps = 70/567 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA----FCTSPAGDINYAYLVFTQIKKPNLFIWN 56
++ ++++HA +++ GL +DP AAS+++A PA ++ + N
Sbjct: 117 LRHVQELHAQVLRQGLHRDPRAASKLIASYALLRRVPACRCVFSAAAAPPFAPSTALLAN 176
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
T++R ++ +S P A+ +F+DM + Q TY L KA A G+ A H V K
Sbjct: 177 TLLRAYALNSLPHAALAVFVDMPLR---QRDTFTYSFLIKALATAGVTPVRAA-HTHVFK 232
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT------------------------- 151
G D F+ N +I Y+ LS+A+ +FDE+ T
Sbjct: 233 LGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSM 292
Query: 152 -----EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK--- 203
E D V+WN+M+ G AK GE +E+ LF +M RN VSW++++S Y + +
Sbjct: 293 FDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVSAYCKKGDMEMAR 352
Query: 204 ----------------------------EALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
EA LF EM+E I+ +VS+L ACA+ G
Sbjct: 353 VIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAACAESG 412
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT-VPKKGLSCWNSMV 294
+ G+ IH + +T+V A++DM+CKCGC RA +F+T + +K WN ++
Sbjct: 413 CLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVSWNIII 472
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G AM+G+ +A+ LF+ ++ PD ++ I VL+AC H G V + + +F M Y I
Sbjct: 473 GGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGI 532
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
KP I+HY CMVD LGR GL++EA +I+SMP +P+ +IWGSLLSACR H N+E A+ AA
Sbjct: 533 KPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSLLSACRLHKNVEYAELAAN 592
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
++ L + + Y ++SN+YA + ++ + + R+ MK +K G S IE+D HEF
Sbjct: 593 ELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELDEAFHEFT 652
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G R HP++ ++ +++ L ++ +G
Sbjct: 653 VGDRKHPESDQISDMIDRLSSHVKCVG 679
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/495 (37%), Positives = 266/495 (53%), Gaps = 46/495 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT----SPAGDINYAYLVFTQIKKPNLFIW- 55
++ L ++HA +K+GL P +R+L CT + ++YA VF +I P +W
Sbjct: 44 LRALAQLHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPGPGDVVWY 103
Query: 56 NTIIRGFSQSSTP-------RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA 108
NT++RG+++ S A +F+ ML + P T+ SL KA A +G
Sbjct: 104 NTLLRGYARCSAAGGARPPAEEAARVFVRML-EEGVAPDTYTFVSLLKACAAARAGEEGR 162
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
Q HG VK G +++ T+I MYA CG AR MF VD E VV++N+
Sbjct: 163 QAHGVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGEC-VVSYNA-------- 213
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
MI+ VR+ + EAL LFREMQ + +K + T++S+L
Sbjct: 214 -----------------------MITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVL 250
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+ACA LGA+ G WIH ++ + V TA+IDMY KCG E A+ VF + +
Sbjct: 251 SACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQ 310
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
W+ M+ A + Y EAI LF ++ +KPD ++F+ VL AC+HSG V++ YF M
Sbjct: 311 AWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFDSM 370
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
E + + P IKHY C+ D L R+G L+ A + I +P P AI+W +LLSAC G+ ++
Sbjct: 371 RE-FGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSRGDADL 429
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
KQ ++I+ELD + YV+ SNL A + ++EE R LM E + K PGCS IEVD
Sbjct: 430 GKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVPGCSSIEVDN 489
Query: 469 EVHEFVAGGRLHPKA 483
VHEF AG HPK+
Sbjct: 490 RVHEFFAGDGRHPKS 504
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 262/467 (56%), Gaps = 32/467 (6%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + YA VF + N W+ +I GF S A LLF ML + S
Sbjct: 172 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA 231
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
+A A L R G QLH + K G+ D N+++ MYA
Sbjct: 232 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA-------------------- 271
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
K G ID++ LFD+M ++TVS+++++SGYV+N + +EA +F++MQ
Sbjct: 272 ------------KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 319
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
N++P TMVSL+ AC+ L A++ G H ++ T + A+IDMY KCG +
Sbjct: 320 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 379
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
+ QVFN +P + + WN+M+ G ++G EA LF + + PD ++FI +L+AC+H
Sbjct: 380 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 439
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
SG V + K +F +M Y + P ++HY CMVD L R G L+EA + I+SMP D +W
Sbjct: 440 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 499
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
+LL ACR + NI++ K+ ++ I EL + +VL+SN+Y+A+ +F+EA E R++ K
Sbjct: 500 ALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG 559
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+K PGCS IE++G +H FV G + HP++PE+Y L+++ + I+++G
Sbjct: 560 FKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLG 606
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 199/420 (47%), Gaps = 34/420 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH H I GL D ++ +L A + A+ +F + +L WN ++ G++
Sbjct: 30 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAH-IFATMPARDLVAWNAMLAGYAH 88
Query: 65 SSTPRNAILLFIDM-LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+A+ + M + ++P T +L AQ G G +H ++ L ++
Sbjct: 89 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL-AKCGEIDESRRLFDKMV 182
S+++L D V + ++ + AKCG + +RR+FD M
Sbjct: 149 N---------------SKSKLT--------DGVLLGTALLDMYAKCGSLLYARRVFDAMP 185
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLLNACAKLGAIRQGE 241
+RN V+W+++I G+V + +A LF+ M Q + S ++ S L ACA L +R GE
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H L + + +++ MY K G ++A+ +F+ + K ++++V G NG
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK-DYFTLMTETYKIKPSIKH 360
EA +F +Q+ N++PD + ++++ AC+H + + + +++ + SI
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI-- 363
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ ++D + G ++ + ++ MPS D + W ++++ HG + K+A +E++
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG---LGKEATALFLEMN 419
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 146/339 (43%), Gaps = 47/339 (13%)
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR 143
+ P T+P KA + L G +H + GL+ D F+ ++ MY C L +A
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 144 LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+F + D+VAWN+M+ G A G M SM
Sbjct: 66 HIFATMPAR-DLVAWNAMLAGYAHHG-----------MYHHAVAHLLSM----------- 102
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN-------- 255
+MQ ++P+ T+V+LL A+ GA+ QG +H + + C N
Sbjct: 103 -------QMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLT 155
Query: 256 --TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL 313
++ TA++DMY KCG A +VF+ +P + W++++ G + +A LF +
Sbjct: 156 DGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAM 215
Query: 314 QSSN---LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGR 370
+ L P I+ + L AC + + L+ ++ + + + ++ +
Sbjct: 216 LAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAK 272
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
AGL+++A L M + D + + +L+S ++G E A
Sbjct: 273 AGLIDQAIALFDEM-AVKDTVSYSALVSGYVQNGRAEEA 310
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + P+ +T L AC+ L G IH + + + V TA++DMY KC C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK--LFSGLQSSNLKPDYISFIAVL 329
A +F T+P + L WN+M+ G A +G + A+ L +Q L+P+ + +A+L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 330 TACNHSGKVNQAKDYFTLMTET---------YKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
G + Q K+ + + ++D + G L A ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 381 IRSMPSDPDAIIWGSLLSA 399
+MP+ + + W +L+
Sbjct: 181 FDAMPAR-NEVTWSALIGG 198
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 284/479 (59%), Gaps = 13/479 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
+K ++ H+ ++ GL+++ + A++++ A C P ++ LVF ++ N+F+WN+
Sbjct: 39 LKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPY----HSRLVFDSLQHKNVFLWNS 94
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+I G++++ A LF + + +S + P T +L K ++LG G +HG+ ++
Sbjct: 95 LINGYAKNRLYNEAFQLF-NQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRI 153
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G D + N+I+ MY CG E+R +FDE+ T + +WN +I G A G + RR+
Sbjct: 154 GFVSDTVVANSIMSMYCKCGNFEESRKVFDEM-TIRNSGSWNVLIAGYAVSGNLVVGRRV 212
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGA 236
FD+M RN SW +MI+GYV N EAL LFR+MQ I+P+ ++VS+L AC+
Sbjct: 213 FDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSG 272
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF--NTVPKKGLSCWNSMV 294
+ G IH F V + A+IDMY KCG + A +VF +++ K +S W+SM+
Sbjct: 273 LLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAIS-WSSMI 331
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G ++G EAI L+ + + ++PD I+ + +L+AC+ SG VN+ + ++ + Y I
Sbjct: 332 SGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGI 391
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+P+++ ++C+VD LGRAG L+ A I++MP +P +WG+L+S HG++EM + A +
Sbjct: 392 EPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYR 451
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
+I+L+ YV +SNLYA+S +++ E R +MK+ ++ K PGCS I ++ + H F
Sbjct: 452 FLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISINNKTHCF 510
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/506 (32%), Positives = 283/506 (55%), Gaps = 68/506 (13%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
+N ++ G++ P+ A L++ +V P T+P++ K+ A+ +G Q+HG +
Sbjct: 2 FNALVSGYAIGDRPKTAFLVY-RRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVI 60
Query: 115 VKQGLEFDQFIHNTIIYMYANC-------------------------------GFLSEAR 143
+K G + ++ N++++ Y+ C G EA
Sbjct: 61 IKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAV 120
Query: 144 LMFDEVDTEFDVVAWNSMII---------------GLA--------------------KC 168
+F +D E + + S+++ GL+ KC
Sbjct: 121 GLFLRMDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKC 180
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G + ++++FD++ ++ VSW S+ISG V+ KEALELF++MQ I+P + S+L
Sbjct: 181 GCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVL 240
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+ACA+LGA+ G W+H + + + + TA++DMY KCGC E ++Q+FN +P K +
Sbjct: 241 SACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVL 300
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN+++ GLAM+G+ + ++LF + ++P+ ++F+A+LTAC H G VN+ + YF M
Sbjct: 301 TWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWM 360
Query: 349 T-ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ Y + P ++HY CMVD L RA LL+EA +L ++MP PD I G+LLSAC+++GN E
Sbjct: 361 KGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGNTE 420
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
+ ++ + +ELD ++S YVL+SN++A + ++++ R LMKE I+K PG ++IE+D
Sbjct: 421 LPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPGSTVIELD 480
Query: 468 GEVHEFVAGGRLHPKAPEVYLLLNDL 493
G+ HEF+ G HP+ + LLL L
Sbjct: 481 GKAHEFIVGDTRHPQDKRIRLLLKIL 506
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 282/507 (55%), Gaps = 45/507 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++ H + G D +S ++ S G++ A +F +I N+ W ++I G+ Q
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDM-YSKCGELRDARTLFDEISHRNIVSWTSMITGYVQ 230
Query: 65 SSTPRNAILLFIDMLVTSP---------IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
+ A+LLF + LV + P + S+ A +++ +HG ++
Sbjct: 231 NDDAHRALLLFKEFLVEESGSEGDGEVCVDP--IAMVSVLSACSRVSEKSITEGVHGFLI 288
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K+G E D + NT++ YA KCGE+ SR
Sbjct: 289 KRGFEGDLGVENTLMDAYA--------------------------------KCGELGVSR 316
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKL 234
R+FD M R+ +SWNS+I+ Y +N E++E+F M ++ I + T+ ++L ACA
Sbjct: 317 RVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHS 376
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G+ R G+ IH+ ++ E N V T+IIDMYCKCG E A + F+ + +K + W++MV
Sbjct: 377 GSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMV 436
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G M+G+ EA+++F + + +KP+YI+F++VL AC+H+G + + +F M+ + +
Sbjct: 437 AGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDV 496
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+P ++HY CMVD LGRAG L+EA LI+ M PD ++WG+LL ACR H N+++ + +A+
Sbjct: 497 EPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISAR 556
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
++ ELD YVL+SN+YA + ++E+ R+LMK + K PG SL+++ G VH F+
Sbjct: 557 KLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFL 616
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G R HP+ ++Y L L + +QE+G
Sbjct: 617 VGDREHPQHEKIYEYLEKLSMKLQEVG 643
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 181/417 (43%), Gaps = 85/417 (20%)
Query: 38 NYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA 97
N L + K N+F WN++I ++S A+ F M S ++P R T+P K+
Sbjct: 103 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLS-LKPNRSTFPCAIKS 161
Query: 98 YAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVA 157
+ L G Q H + + G E D F+ + ++ MY+ CG L +AR +FDE+ + ++V+
Sbjct: 162 CSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEI-SHRNIVS 220
Query: 158 WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM----- 212
W SMI+GYV+N AL LF+E
Sbjct: 221 W-------------------------------TSMITGYVQNDDAHRALLLFKEFLVEES 249
Query: 213 ---QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
+ + MVS+L+AC+++ E +H FL+ FE + V ++D Y KC
Sbjct: 250 GSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKC 309
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAV 328
G + +VF+ + ++ + WNS++ A NG E++++F + + + + ++ AV
Sbjct: 310 GELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 369
Query: 329 LTACNHS-----------------------------------GKVNQAKDYFTLMTETYK 353
L AC HS GKV A+ F M E
Sbjct: 370 LLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE--- 426
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSM---PSDPDAIIWGSLLSACRKHGNIE 407
++K +S MV G G +EA ++ M P+ I + S+L+AC G +E
Sbjct: 427 --KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLE 481
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 147/306 (48%), Gaps = 21/306 (6%)
Query: 177 LFDKMVSR-NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
LF+K V + N SWNS+I+ R+ EAL F M++ ++KP+ T + +C+ L
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+ G H + FE + V +A++DMY KCG A +F+ + + + W SM+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226
Query: 296 GLAMNGYENEAIKLF-------SGLQSSN-LKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
G N + A+ LF SG + + D I+ ++VL+AC+ + + +
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ + + + + ++DA + G L + ++ M ++ D I W S+++ ++G
Sbjct: 287 LIKR-GFEGDLGVENTLMDAYAKCGELGVSRRVFDGM-AERDVISWNSIIAVYAQNG--- 341
Query: 408 MAKQAAKQIIELDKNESCGY-------VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPG 460
M+ ++ + + K+ Y VL++ ++ S + + + ++++ ++ G
Sbjct: 342 MSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVG 401
Query: 461 CSLIEV 466
S+I++
Sbjct: 402 TSIIDM 407
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/576 (33%), Positives = 300/576 (52%), Gaps = 87/576 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA---FCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
+ + +IHA ++K L +D A +++A C A +N VF + PN+ ++N+
Sbjct: 34 LDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVN----VFNHVPHPNVHLYNS 89
Query: 58 IIRGF----SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY---AQLGLARDGAQL 110
IIR S S P NA + + + P TYP L KA + L L R +
Sbjct: 90 IIRAHAHNTSHPSLPFNAFF----QMQKNGLFPDNFTYPFLLKACTGPSSLPLVR---MI 142
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGF-------------------------------- 138
H V K G D F+ N++I Y+ CG
Sbjct: 143 HAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCG 202
Query: 139 -LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY- 196
L A +FDE+ E D+V+WN+M+ G AK GE+D + LF++M RN VSW++M+ GY
Sbjct: 203 ELEGACKLFDEM-PERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNIVSWSTMVCGYS 261
Query: 197 ----------------VRNVKF--------------KEALELFREMQEQNIKPSEFTMVS 226
+NV +EA EL+ +M+E ++P + ++S
Sbjct: 262 KGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLIS 321
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN-TVPKK 285
+L ACA+ G + G+ IH + F T V+ A IDMY KCGC + A VF+ + KK
Sbjct: 322 ILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKK 381
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
+ WNSM+ G AM+G+ +A++LFS + +PD +F+ +L AC H+G VN+ + YF
Sbjct: 382 DVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYF 441
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
M + Y I P ++HY CM+D LGR G L+EA L+RSMP +P+AII G+LL+ACR H +
Sbjct: 442 YSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHND 501
Query: 406 IEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE 465
++ A+ +Q+ +++ + Y L+SN+YA + + RL M +K G S IE
Sbjct: 502 VDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIE 561
Query: 466 VDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
V+ EVHEF + HPK+ ++Y +++ L ++++G
Sbjct: 562 VEEEVHEFTVFDQSHPKSDDIYKMIDRLVQDLRQVG 597
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 262/467 (56%), Gaps = 32/467 (6%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + YA VF + N W+ +I GF S A LLF ML + S
Sbjct: 172 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA 231
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
+A A L R G QLH + K G+ D N+++ MYA
Sbjct: 232 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA-------------------- 271
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
K G ID++ LFD+M ++TVS+++++SGYV+N + +EA +F++MQ
Sbjct: 272 ------------KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 319
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
N++P TMVSL+ AC+ L A++ G H ++ T + A+IDMY KCG +
Sbjct: 320 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 379
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
+ QVFN +P + + WN+M+ G ++G EA LF + + PD ++FI +L+AC+H
Sbjct: 380 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 439
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
SG V + K +F +M Y + P ++HY CMVD L R G L+EA + I+SMP D +W
Sbjct: 440 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 499
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
+LL ACR + NI++ K+ ++ I EL + +VL+SN+Y+A+ +F+EA E R++ K
Sbjct: 500 ALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG 559
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+K PGCS IE++G +H FV G + HP++PE+Y L+++ + I+++G
Sbjct: 560 FKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLG 606
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 199/420 (47%), Gaps = 34/420 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH H I GL D ++ +L A + A+ +F + +L WN ++ G++
Sbjct: 30 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAH-IFATMPARDLVAWNAMLAGYAH 88
Query: 65 SSTPRNAILLFIDM-LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+A+ + M + ++P T +L AQ G G +H ++ L ++
Sbjct: 89 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL-AKCGEIDESRRLFDKMV 182
S+++L D V + ++ + AKCG + +RR+FD M
Sbjct: 149 N---------------SKSKLT--------DGVLLGTALLDMYAKCGSLLYARRVFDAMP 185
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLLNACAKLGAIRQGE 241
+RN V+W+++I G+V + +A LF+ M Q + S ++ S L ACA L +R GE
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H L + + +++ MY K G ++A+ +F+ + K ++++V G NG
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK-DYFTLMTETYKIKPSIKH 360
EA +F +Q+ N++PD + ++++ AC+H + + + +++ + SI
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI-- 363
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ ++D + G ++ + ++ MPS D + W ++++ HG + K+A +E++
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG---LGKEATALFLEMN 419
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 146/339 (43%), Gaps = 47/339 (13%)
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR 143
+ P T+P KA + L G +H + GL+ D F+ ++ MY C L +A
Sbjct: 6 VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65
Query: 144 LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+F + D+VAWN+M+ G A G M SM
Sbjct: 66 HIFATMPAR-DLVAWNAMLAGYAHHG-----------MYHHAVAHLLSM----------- 102
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN-------- 255
+MQ ++P+ T+V+LL A+ GA+ QG +H + + C N
Sbjct: 103 -------QMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLT 155
Query: 256 --TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL 313
++ TA++DMY KCG A +VF+ +P + W++++ G + +A LF +
Sbjct: 156 DGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAM 215
Query: 314 QSSN---LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGR 370
+ L P I+ + L AC + + L+ ++ + + + ++ +
Sbjct: 216 LAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAK 272
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
AGL+++A L M + D + + +L+S ++G E A
Sbjct: 273 AGLIDQAIALFDEM-AVKDTVSYSALVSGYVQNGRAEEA 310
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 12/199 (6%)
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + P+ +T L AC+ L G IH + + + V TA++DMY KC C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK--LFSGLQSSNLKPDYISFIAVL 329
A +F T+P + L WN+M+ G A +G + A+ L +Q L+P+ + +A+L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 330 TACNHSGKVNQAKDYFTLMTET---------YKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
G + Q K+ + + ++D + G L A ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 381 IRSMPSDPDAIIWGSLLSA 399
+MP+ + + W +L+
Sbjct: 181 FDAMPAR-NEVTWSALIGG 198
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 262/433 (60%), Gaps = 6/433 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTS-PIQPQRLTYPS 93
G + A VF + + F W +I F ++ A+ +F DM P+ + S
Sbjct: 217 GMVEEARGVFDGAEHRDAFTWTAMISCFERNDLFVEALAVFSDMREEGWPVDEAVMV--S 274
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ A A+ + ++G HG VV+ GL + N +I+MY++C + AR +FD ++
Sbjct: 275 VVAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSES-L 333
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
D +WNSMI G K G +++++ LF+ M ++ VSW++MI+G V+N + EAL +F M+
Sbjct: 334 DHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMR 393
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
IKP E T+VS+++AC L A+ QG+ +H ++ + + ++ T++IDMY KCGC E
Sbjct: 394 AHEIKPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQYNITIVLGTSLIDMYMKCGCME 453
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK-PDYISFIAVLTAC 332
AL+VF+ V +KG CWN+++ GLAMNG ++ +FS +++S + P I+F VL+AC
Sbjct: 454 AALEVFDMVEEKGTPCWNAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEITFTGVLSAC 513
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H G V + + +F LM Y+I P+I+HY CMVD LGRAG + EAE LI+SMP PD
Sbjct: 514 RHGGLVEEGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSMPMSPDVPA 573
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
WG+LL AC KH + E+ ++ K++++LD + ++SN+YA+ ++ + R MK+
Sbjct: 574 WGALLGACWKHSDSEVGERVGKKLVKLDPHHDGFQTMLSNIYASEGMWQCVKDLRGSMKQ 633
Query: 453 VKIEKEPGCSLIE 465
+ K GCS++E
Sbjct: 634 -HVAKVAGCSVVE 645
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 223/513 (43%), Gaps = 109/513 (21%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAG------DINYAYLVFTQIKKPNLFIW 55
+ L +IHA + +GL D AASR+L F TS ++++ +F ++ PN F
Sbjct: 18 RHLLEIHAQFLASGLLADAYAASRLLLFTTSATAARLLPQPLHHSLQLFRLVRSPNAFTC 77
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
NT+IR + P L+ M P P T+P L A A G AR+G Q+H V
Sbjct: 78 NTLIRAALRQGLPHLCFPLYASM----PAAPDTYTHPLLAAACAARGDAREGRQVHSHAV 133
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN---------------- 159
K G + ++ N +++MY+ CG ++ AR +FD +D V+WN
Sbjct: 134 KHGFGDNLYLRNALMHMYSACGCVAGARRVFD-AGPVWDAVSWNTILATYVRDGDVEQAV 192
Query: 160 ---------------SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
SM+ A+ G ++E+R +FD R+ +W +MIS + RN F E
Sbjct: 193 GVFARMPERSAAAVSSMVALFARTGMVEEARGVFDGAEHRDAFTWTAMISCFERNDLFVE 252
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
AL +F +M+E+ E MVS++ ACAK I+ GE H +V V A+I
Sbjct: 253 ALAVFSDMREEGWPVDEAVMVSVVAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIH 312
Query: 265 MYCKC-------------------------------GCPERALQVFNTVPKKGLSCWNSM 293
MY C G E A +FN +P K W++M
Sbjct: 313 MYSSCLDVVAARRLFDSSESLDHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAM 372
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ G N +EA+ +F +++ +KPD ++ ++V++AC + + Q K + + Y+
Sbjct: 373 IAGCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLCALEQGKLVHEYIRQ-YQ 431
Query: 354 IKPSIKHYSCMVDALGRAGLLEEA--------EK-----------------LIRSMP--- 385
+I + ++D + G +E A EK + RS+
Sbjct: 432 YNITIVLGTSLIDMYMKCGCMEAALEVFDMVEEKGTPCWNAVIVGLAMNGLVTRSLDMFS 491
Query: 386 -------SDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ P I + +LSACR G +E +Q
Sbjct: 492 EMETSGIAVPSEITFTGVLSACRHGGLVEEGRQ 524
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/495 (34%), Positives = 275/495 (55%), Gaps = 33/495 (6%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA +IK+ D R+++ D + A +F ++ +L WN+++ G S
Sbjct: 84 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDED-AQRLFDEMPNKDLVSWNSLMSGLSGRG 142
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
+ F M S QP +T S+ A A +G +G LHG VVK G+ +
Sbjct: 143 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV 202
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N++I MY GFL D + +LF++M R+
Sbjct: 203 NSLINMYGKLGFL--------------------------------DAASQLFEEMPVRSL 230
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSWNSM+ + N ++ ++LF M+ I P + TMV+LL AC G RQ E IH +
Sbjct: 231 VSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAY 290
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ F + I+ TA++++Y K G + +F + + W +M+ G A++ EA
Sbjct: 291 IHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREA 350
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
IKLF + ++ D+++F +L+AC+HSG V + K YF +M+E Y+++P + HYSCMVD
Sbjct: 351 IKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVD 410
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR+G LE+A +LI+SMP +P + +WG+LL ACR +GN+E+ K+ A+Q++ LD ++
Sbjct: 411 LLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRN 470
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
Y+++SN+Y+A+ + +A + R LMKE ++ + PGCS IE ++H FV G +LHP++ E+
Sbjct: 471 YIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEI 530
Query: 487 YLLLNDLGLLIQEMG 501
+ L +L I+E G
Sbjct: 531 HTKLEELIRKIREAG 545
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
SL+ A + ++ IH ++ + + + ++ MY K G E A ++F+ +P K
Sbjct: 67 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK 126
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDY 344
L WNS++ GL+ GY + F +++ S +P+ ++ ++V++AC G +++ K
Sbjct: 127 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSL 186
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
++ + + K + +++ G+ G L+ A +L MP + W S++ +G
Sbjct: 187 HGVVVKL-GMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPV-RSLVSWNSMVVIHNHNG 244
Query: 405 NIE 407
E
Sbjct: 245 YAE 247
>gi|449507733|ref|XP_004163116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Cucumis sativus]
Length = 442
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/418 (38%), Positives = 256/418 (61%), Gaps = 6/418 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +LK+IHA L G+++D S++L F SPA D++Y+Y + + P F WNT+I
Sbjct: 26 MFELKRIHALLFTLGISQDETIKSKLLLFSALSPARDLDYSYKLILNVPNPTTFNWNTLI 85
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R FS + P +I +FI ML + + P LTYP L KA ++L G +H +VK G
Sbjct: 86 RAFSNTKNPNPSITVFIKML-QNGVSPDYLTYPFLVKATSKLLNQELGMAVHVHIVKSGH 144
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D+FI N++I+MYA+C ++ AR +FDE+ + ++V WN+M+ G AKCG+++ +R +F+
Sbjct: 145 EIDKFIQNSLIHMYASCRDIASARKVFDEMPRK-NLVTWNAMLDGYAKCGDLNMAREVFN 203
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M ++ VSW+S+I GYV+ + EA+ LF M +E T+VS L ACA LGA+
Sbjct: 204 LMPEKDVVSWSSLIDGYVKGRVYGEAMALFERMSFDGPMANEVTLVSALCACAHLGALEH 263
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN--TVPKKGLSCWNSMVFGL 297
G +H ++V N L ++ T+++DMY KCG AL VF ++ + + WN+++ GL
Sbjct: 264 GRMMHRYIVENELPLTIVLQTSLVDMYAKCGAIHEALTVFRACSLQEADVLIWNAIIGGL 323
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A +G EA+ LF ++ + PD I+++ +L+ C H G V +A +F + + + + P
Sbjct: 324 ATHGLIKEAMNLFCEMKMVGIVPDEITYLCLLSCCAHGGLVEEAWYFFDCLRK-HGMIPK 382
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
++HY+CMVDAL RAG + EA + + MP P + + G+LLS C KHGN K + K+
Sbjct: 383 VEHYACMVDALSRAGQVSEAYQFLCQMPVQPTSSMLGALLSGCMKHGNAGHCKSSRKE 440
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 171/454 (37%), Positives = 260/454 (57%), Gaps = 3/454 (0%)
Query: 42 LVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL 101
+V KP LF++N +I+ +S ++ + P + T+ LF A L
Sbjct: 1 MVLHHSSKPTLFLYNKLIQAYSSHPQHQHRCFSLYSQIRLHGFLPNQHTFNFLFSACTSL 60
Query: 102 GLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM 161
+ G LH +K G E D F ++ MYA G L AR +FDE+ V WN+M
Sbjct: 61 SSSSLGQMLHTHFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVR-GVPRWNAM 119
Query: 162 IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPS 220
+ GLA+ G++D + LF M SRN V W +MISGY N ++ +AL LF M QE+ I P+
Sbjct: 120 MAGLARFGDMDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKGIMPN 179
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
T+VS+L ACA L A+ G+ + + N F N A+++MY KCG + A +VFN
Sbjct: 180 AVTLVSILPACANLXALEIGQRVEAYARKNGFFKNXYASNAVLEMYVKCGKIDAAWRVFN 239
Query: 281 TVPK-KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+ + L WNSMV GLA++G +A++L+ + PD ++F+ +L AC G V
Sbjct: 240 EIGSLRNLCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQGGMVK 299
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ + F T ++ I P ++HY CMVD LGRAG L EA ++I+SM PD++IWG+LL A
Sbjct: 300 KGRHIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWGALLGA 359
Query: 400 CRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP 459
C HGN+E+A+ AA+ + L+ YV++SN+YA++ Q++ + R +MK KI K
Sbjct: 360 CSFHGNVELAEIAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSA 419
Query: 460 GCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
G S IE ++H+F+ R HPK+ E++ LL+ +
Sbjct: 420 GHSFIEEGAQLHKFIVKDRSHPKSNEIFALLDGV 453
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 172/443 (38%), Gaps = 106/443 (23%)
Query: 7 IHAHLIKTGLAKDPIAASRIL--------------AFCTSPA----------------GD 36
+H H IK+G D AA+ +L F P GD
Sbjct: 69 LHTHFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVRGVPRWNAMMAGLARFGD 128
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
++ A +F + N+ W T+I G+S + A+ LF+ M I P +T S+
Sbjct: 129 MDGALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKGIMPNAVTLVSILP 188
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A L G ++ K G + + N ++ MY CG + A +F+E+ + ++
Sbjct: 189 ACANLXALEIGQRVEAYARKNGFFKNXYASNAVLEMYVKCGKIDAAWRVFNEIGSLRNLC 248
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNSM++GLA GE ++ L+D+M+ T
Sbjct: 249 SWNSMVVGLAVHGECCKALELYDQMLGEGT------------------------------ 278
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
P + T V LL AC + G +++G I T+
Sbjct: 279 -SPDDVTFVGLLLACTQGGMVKKGRHIFKSKTTS-------------------------- 311
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
F +PK L + MV L G EA ++ +QS ++KPD + + A+L AC+ G
Sbjct: 312 --FYIIPK--LEHYGCMVDLLGRAGQLREAYEV---IQSMSMKPDSVIWGALLGACSFHG 364
Query: 337 KVNQAKDYFTLMTETYKIKP-SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
V A+ + ++P + +Y + + AG + KL + M GS
Sbjct: 365 NVELAE---IAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMK--------GS 413
Query: 396 LLSACRKHGNIEMAKQAAKQIIE 418
++ H IE Q K I++
Sbjct: 414 KITKSAGHSFIEEGAQLHKFIVK 436
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/495 (36%), Positives = 274/495 (55%), Gaps = 50/495 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTS--PAGDINYAYLVFTQIKKPNLFIWNTI 58
+K+LK+I A+ IKT + ++ + FCTS + +A+ +F QI +PN+ ++NT+
Sbjct: 39 LKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNTM 98
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG+++ + P I F L RL S KA A+ G QLH VK G
Sbjct: 99 ARGYARLNDPLRMITHFRRCL--------RLV--SKVKALAE------GKQLHCFAVKLG 142
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ + ++ T+I MY CG+ID SRR+F
Sbjct: 143 VSDNMYVVPTLINMYT--------------------------------ACGDIDASRRVF 170
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
DK+ V++N++I RN + EAL LFRE+QE +KP++ TM+ +L++CA LG++
Sbjct: 171 DKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLD 230
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G W+H ++ F+ V T +IDMY KCG + A+ VF +PK+ W++++ A
Sbjct: 231 LGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYA 290
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +AI + + ++ ++PD I+F+ +L AC+H+G V + +YF MT Y I PSI
Sbjct: 291 THGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSI 350
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
KHY CMVD LGRAG L+EA K I +P P I+W +LLSAC HGN+EM K+ ++I E
Sbjct: 351 KHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFE 410
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD + YV+ SNL A ++++ R M + K PGCS IEV+ VHEF AG
Sbjct: 411 LDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEG 470
Query: 479 LHPKAPEVYLLLNDL 493
+H + ++ L++L
Sbjct: 471 VHSTSTTLHRALDEL 485
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/495 (34%), Positives = 275/495 (55%), Gaps = 33/495 (6%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA +IK+ D R+++ D + A +F ++ +L WN+++ G S
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDED-AQRLFDEMPNKDLVSWNSLMSGLSGRG 199
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
+ F M S QP +T S+ A A +G +G LHG VVK G+ +
Sbjct: 200 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV 259
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N++I MY GFL D + +LF++M R+
Sbjct: 260 NSLINMYGKLGFL--------------------------------DAASQLFEEMPVRSL 287
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSWNSM+ + N ++ ++LF M+ I P + TMV+LL AC G RQ E IH +
Sbjct: 288 VSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAY 347
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ F + I+ TA++++Y K G + +F + + W +M+ G A++ EA
Sbjct: 348 IHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREA 407
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
IKLF + ++ D+++F +L+AC+HSG V + K YF +M+E Y+++P + HYSCMVD
Sbjct: 408 IKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVD 467
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR+G LE+A +LI+SMP +P + +WG+LL ACR +GN+E+ K+ A+Q++ LD ++
Sbjct: 468 LLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRN 527
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
Y+++SN+Y+A+ + +A + R LMKE ++ + PGCS IE ++H FV G +LHP++ E+
Sbjct: 528 YIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEI 587
Query: 487 YLLLNDLGLLIQEMG 501
+ L +L I+E G
Sbjct: 588 HTKLEELIRKIREAG 602
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 120/253 (47%), Gaps = 24/253 (9%)
Query: 177 LFDKMVSRNTVSWNSMIS--------GYVRNVKFKEALELFREMQEQNI--------KPS 220
+F++ ++R V WNS++S + R+ F+ + ++ + N + S
Sbjct: 54 VFNQQLTRLAVPWNSIVSPVRCGTSISHNRSFAFRHTDLIPKQFKRFNTNKGCCIFREAS 113
Query: 221 EFTMV-----SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
+F +V SL+ A + ++ IH ++ + + + ++ MY K G E A
Sbjct: 114 QFIVVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDA 173
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNH 334
++F+ +P K L WNS++ GL+ GY + F +++ S +P+ ++ ++V++AC
Sbjct: 174 QRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAD 233
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
G +++ K ++ + + K + +++ G+ G L+ A +L MP + W
Sbjct: 234 MGALDEGKSLHGVVVK-LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR-SLVSWN 291
Query: 395 SLLSACRKHGNIE 407
S++ +G E
Sbjct: 292 SMVVIHNHNGYAE 304
>gi|255543449|ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547798|gb|EEF49290.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 480
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/408 (37%), Positives = 250/408 (61%), Gaps = 8/408 (1%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+K + A +I+ L+ D + ++L C S ++YA L+F QI+ P+ F WN +IR ++
Sbjct: 48 VKLVQAKIIRNNLSDDQLLVRKLLRLCFS-YQKVDYATLIFDQIQNPHTFTWNFMIRAYN 106
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ + A+LL+ ++++ P + T+P + KA G ++HG +K G D
Sbjct: 107 YNGNSQQALLLY-NLMICEGFSPDKFTFPFVIKACLDHSALDKGKEVHGFAIKTGFWKDT 165
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ NT++ +Y CG L AR +FD++ VV+W + + GL CGE+D +R FD+M
Sbjct: 166 FLSNTLMDLYFKCGDLDYARKLFDKMAVR-SVVSWTTFVAGLVACGELDTARAAFDEMPM 224
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
RN VSW +MI+GYV+N + +EA ELF+ MQ N++P+ FT+V LL AC +LG++ G I
Sbjct: 225 RNVVSWTAMINGYVKNQRPQEAFELFQRMQLANVRPNGFTLVGLLRACTELGSLELGRRI 284
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H + + N F++ + TA+IDMY KCG E A +VF + KK L+ WNSM+ L ++G+
Sbjct: 285 HEYALENGFKVGVFLGTALIDMYSKCGSIEDAKKVFEEMQKKSLATWNSMITSLGVHGFG 344
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ LF+ ++ +N++PD I+F+ VL AC ++ V YF MTE Y I P ++HY+C
Sbjct: 345 KEALALFAQMEEANVRPDAITFVGVLFACVNTNNVEAGYRYFKYMTEHYGITPMLEHYTC 404
Query: 364 MVDALGRAGLLEEAEKLIRSMP----SDP-DAIIWGSLLSACRKHGNI 406
M++ RA +L E +L+ SMP S+P A++W S++ + ++ N
Sbjct: 405 MIELYTRAAMLNEVSELVNSMPMKLNSNPAAALVWPSIIDSNAENENF 452
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 129/313 (41%), Gaps = 64/313 (20%)
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
++D + +FD++ + +T +WN MI Y N ++AL L+ M + P +FT ++
Sbjct: 79 KVDYATLIFDQIQNPHTFTWNFMIRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVIK 138
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG------------------- 270
AC A+ +G+ +H F + F +T + ++D+Y KCG
Sbjct: 139 ACLDHSALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSVVS 198
Query: 271 ----------CPE--RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
C E A F+ +P + + W +M+ G N EA +LF +Q +N+
Sbjct: 199 WTTFVAGLVACGELDTARAAFDEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLANV 258
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-YKI----------------------- 354
+P+ + + +L AC G + + E +K+
Sbjct: 259 RPNGFTLVGLLRACTELGSLELGRRIHEYALENGFKVGVFLGTALIDMYSKCGSIEDAKK 318
Query: 355 ------KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLLSACRKHGN 405
K S+ ++ M+ +LG G +EA L M PDAI + +L AC N
Sbjct: 319 VFEEMQKKSLATWNSMITSLGVHGFGKEALALFAQMEEANVRPDAITFVGVLFACVNTNN 378
Query: 406 IEMAKQAAKQIIE 418
+E + K + E
Sbjct: 379 VEAGYRYFKYMTE 391
>gi|414880744|tpg|DAA57875.1| TPA: hypothetical protein ZEAMMB73_657034, partial [Zea mays]
Length = 1822
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/514 (33%), Positives = 285/514 (55%), Gaps = 26/514 (5%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD--INYAYLVFTQIKKPNLFIWNTIIRG 61
L+ +HAHL+ +G P S + AF S A ++YA LV Q + L N IR
Sbjct: 1227 LRALHAHLVVSGRLASP---SHLAAFLASLASSNHLSYARLVLPQ-RPATLLAHNAFIRA 1282
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY--------------AQLGLARDG 107
++ P A F D+ P+ P + L +A A++
Sbjct: 1283 LARGPRPCLAFAAFRDL----PLPPDHYSLNFLVRAATALVASAAEEKHVSAEVNARLQA 1338
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
HG V+ G D + + ++ MYA G ++ +R F E+ DVV +M+ LA
Sbjct: 1339 VSAHGAAVRWGHAADPHVQSGVLSMYAALGDVASSRAAFAEIACP-DVVCVTAMVAALAA 1397
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
G++D +R LFD M R+ V+W++MI+GY+ + +EAL LF EM E T+VS+
Sbjct: 1398 GGDVDAARDLFDGMPQRDHVAWSAMIAGYMHVGRSREALMLFDEMLSAGTTVGEATLVSV 1457
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
L ACA++G + +G+W+H ++ + +++ + TA++DMY KCG A++VF ++ ++ +
Sbjct: 1458 LTACAQIGTLDRGKWVHWYVRSRGMQMSIKLGTALVDMYSKCGAVVTAMEVFESMAERNV 1517
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
W S V GLAMNG E ++LF ++ + ++P+ +SF+AVL C+ +G V++ + F
Sbjct: 1518 YTWTSAVSGLAMNGMGTECLQLFKRMEGAGIQPNGVSFVAVLRGCSMAGLVDEGRACFDS 1577
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
M + Y + P +HY CMVD GRAG L++A I MP +P +WG+LL+A R H +++
Sbjct: 1578 M-DKYGVDPWPEHYGCMVDLYGRAGRLDDAISFINDMPMEPHEGVWGALLNASRIHNSVD 1636
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
+ K A +++ ++ +V +SN+YA S ++ R +MK ++K PG S IEVD
Sbjct: 1637 LGKYALDKLLAIESENDAAHVQLSNIYAESQNWKGVSRVRGMMKAKGVKKVPGWSTIEVD 1696
Query: 468 GEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G+VHEF GGRLHP+ E+ L+L ++ ++ G
Sbjct: 1697 GKVHEFYVGGRLHPRYNEIELMLAEMDRRLRLQG 1730
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 257/433 (59%), Gaps = 4/433 (0%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S AG N A VF I ++ W TII G+ + R A++++ ++V++ + P +T
Sbjct: 138 SKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMMY-RLMVSTGLGPSEVTM 196
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
L A + +G QLH VVK + F+ T+I+ Y+ CG ++EA E
Sbjct: 197 IDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSACGRINEACFQL-EFGM 255
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ V + N++I G + ID++R LF++M R+ SW++MISGY ++ + ALELF
Sbjct: 256 KDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYTQSDQPGMALELFHR 315
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M I+P+E TMVS+ +A A LG +++G W H ++ N LN + +IIDMY KCG
Sbjct: 316 MVTSGIRPNEVTMVSVFSAIAALGTLKEGRWAHEYVHYNSIPLNDNLSASIIDMYAKCGS 375
Query: 272 PERALQVFNTVPKKG--LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
AL+VF + K +S WN+++ GLA +G+ +++++S LQ ++K I+FI VL
Sbjct: 376 INTALEVFYQIRDKASTVSPWNTIICGLATHGHAKLSLEIYSDLQRRHIKLSAITFIGVL 435
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
+AC H+G V K YF M Y I P I+HY CMVD LG+AG LEE E+LIRSMP D
Sbjct: 436 SACCHAGLVGLGKSYFKSMKSKYNIDPDIRHYGCMVDLLGKAGRLEEVEELIRSMPMKAD 495
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
+IWG LLSAC+ H NI + ++AA+ + +LD + +L+SNLYA ++E+A R +
Sbjct: 496 VVIWGMLLSACKTHRNITIGERAAENLAKLDPSHGPSRILLSNLYADVGRWEDAFLVRRV 555
Query: 450 MKEVKIEKEPGCS 462
M+ ++ + PG S
Sbjct: 556 MQSHRMHRLPGYS 568
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 173/342 (50%), Gaps = 37/342 (10%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
+G+++ A +F + + + T+I GF ++ AI ++ +M + + P +T S
Sbjct: 8 SGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMR-SVGVVPNEVTMAS 66
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI--HNTIIYMYANCGFLSEARLMFDEVDT 151
+ A ++G D LHG V+K + FD F+ ++ MY L EAR +FDE+
Sbjct: 67 VISACCRVGRIWDCRMLHGLVIK--MMFDGFVLVSTNLLNMYCASSSLGEARALFDEMQ- 123
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
E +VV+WN M+ G +K G + ++ +F+ + ++ VSW ++I GYVR + +EAL ++R
Sbjct: 124 EKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMMYRL 183
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG- 270
M + PSE TM+ L++AC + AI +G+ +H +V F+ V +I Y CG
Sbjct: 184 MVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSACGR 243
Query: 271 ------------------------------CPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
++A ++FN +P++ + W++M+ G +
Sbjct: 244 INEACFQLEFGMKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGYTQS 303
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
A++LF + +S ++P+ ++ ++V +A G + + +
Sbjct: 304 DQPGMALELFHRMVTSGIRPNEVTMVSVFSAIAALGTLKEGR 345
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 119/220 (54%), Gaps = 5/220 (2%)
Query: 161 MIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS 220
MI G K G +D++R+LF+ M + VS+ +MI G+V+N + EA+++++EM+ + P+
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
E TM S+++AC ++G I +H ++ F+ +V T +++MYC A +F+
Sbjct: 61 EVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFD 120
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
+ +K + WN M+ G + G+ N A ++F + D +S+ ++ ++ +
Sbjct: 121 EMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDK----DIVSWGTIIDGYVRVERLRE 176
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
A + LM T + PS ++ A GRA + E ++L
Sbjct: 177 ALMMYRLMVST-GLGPSEVTMIDLISACGRAMAIVEGQQL 215
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 250/413 (60%), Gaps = 5/413 (1%)
Query: 82 SPIQPQRLTYPSLFKAYAQL--GLARDGAQLHGRVVKQGLEFDQFIHNT-IIYMYANCGF 138
+ ++P +T+ +L + L G G LHG K GL+ + T I+ MY+ G
Sbjct: 8 AGVEPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGMYSKRGR 67
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
+ARL+FD ++ E + V WN+MI G + G++D++ +LFD+M R+ +SW +MI+G+V+
Sbjct: 68 FRKARLVFDYME-EKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMINGFVK 126
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
+EAL FREMQ +KP +++ L AC LGA+ G WIH ++V+ F+ N V
Sbjct: 127 KGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFKNNVRV 186
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
++ID+YC+CGC E A QVF+ + K+ + WNS++ G A NG+ +E++ F +Q
Sbjct: 187 SNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRKMQEEGF 246
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
KP+ ++F L ACNH G V + YF M Y+I P I+HY C+VD RAG LE+A
Sbjct: 247 KPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLEDAL 306
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
K+++SMP P+ ++ GSLL+ACR G N +A++ K + +L+ YV++SN+YAA
Sbjct: 307 KVVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYVILSNMYAAD 366
Query: 438 YQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLL 490
++E A + R MK + ++KEPG S IE+D H F+AG H + + +L
Sbjct: 367 GKWEGASKMRRKMKGLGLKKEPGFSSIEIDDCTHVFMAGDNTHVETTNIREVL 419
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 123/310 (39%), Gaps = 63/310 (20%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL + + + S G A LVF +++ N WNT+I G+ ++
Sbjct: 38 LHGYACKLGLDRAHVMVGTAILGMYSKRGRFRKARLVFDYMEEKNSVTWNTMIDGYMRNG 97
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
+A+ LF +M + S ++P + +
Sbjct: 98 QVDDAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALA 157
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A LG G +H VV Q + + + N++I +Y CG + AR +FD+++ VV
Sbjct: 158 ACTNLGALSFGLWIHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKR-TVV 216
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G ES L FR+MQE+
Sbjct: 217 SWNSVIVGFAANGHAHES-------------------------------LVYFRKMQEEG 245
Query: 217 IKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
KP+ T L AC +G + +G + + ++D+Y + G E A
Sbjct: 246 FKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLEDA 305
Query: 276 LQVFNTVPKK 285
L+V ++P K
Sbjct: 306 LKVVQSMPMK 315
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 164/463 (35%), Positives = 260/463 (56%), Gaps = 32/463 (6%)
Query: 39 YAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY 98
YA VF + N W+ +I GF A LF DMLV + S +
Sbjct: 257 YACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVC 316
Query: 99 AQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAW 158
A L R G QLH + K G+ D N+++ MYA
Sbjct: 317 ASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYA------------------------ 352
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
K G I+E+ LFD++ ++T+S+ +++SGYV+N K +EA +F++MQ N++
Sbjct: 353 --------KAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQ 404
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
P TMVSL+ AC+ L A++ G H ++ L T + ++IDMY KCG + + QV
Sbjct: 405 PDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQV 464
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
F+ +P + + WN+M+ G ++G EA LF +++ +PD ++FI ++ AC+HSG V
Sbjct: 465 FDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLV 524
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
+ K +F MT Y I P ++HY CMVD L R G L+EA + I+SMP D +WG+LL
Sbjct: 525 TEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLG 584
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
ACR H NI++ KQ ++ I +L + +VL+SN+++A+ +F+EA E R++ K +K
Sbjct: 585 ACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKS 644
Query: 459 PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
PGCS IE++G +H FV G + HP +P++Y L+++ + I+++G
Sbjct: 645 PGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLG 687
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 185/422 (43%), Gaps = 39/422 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IHAH GL D ++ ++ A A VF ++ ++ WN ++ G++
Sbjct: 119 RTIHAHAAAVGLHTDLFVSTALIDLYIRCA-RFGPAANVFAKMPMRDVVAWNAMLAGYAN 177
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+AI +DM ++P T SL AQ G G +H ++ L+
Sbjct: 178 HGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLD---- 233
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
E V+ +++ AKC + + R+F M R
Sbjct: 234 -------------------------QNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVR 268
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLLNACAKLGAIRQGEWI 243
N V+W+++I G+V + EA LF++M + + S ++ S L CA L +R G +
Sbjct: 269 NEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQL 328
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H L + + +++ MY K G A +F+ + K + +++ G NG
Sbjct: 329 HALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKA 388
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK-DYFTLMTETYKIKPSIKHYS 362
EA +F +Q+ N++PD + ++++ AC+H + + + +++ ++ SI +
Sbjct: 389 EEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSI--CN 446
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
++D + G ++ + ++ MP+ D + W ++++ HG + K+A + + KN
Sbjct: 447 SLIDMYAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIHG---LGKEATTLFLSM-KN 501
Query: 423 ES 424
+
Sbjct: 502 QG 503
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G++ +R++FD++ + + ++N++I Y F A++L+R M + P+++T +L
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
AC+ L + G IH + V TA+ID+Y +C A VF +P + +
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
WN+M+ G A +G + AI +Q L+P+ + +++L G + Q
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 348 MTETY 352
Y
Sbjct: 227 CLRAY 231
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 89/207 (42%), Gaps = 10/207 (4%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H +I GLA + + ++ + G I+ + VF ++ ++ WNT+I G+
Sbjct: 430 HGSVIIRGLALETSICNSLIDM-YAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGL 488
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV-KQGL--EFDQF 124
+ A LF+ M +P +T+ L A + GL +G + K G+ + +
Sbjct: 489 GKEATTLFLSM-KNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY 547
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID---ESRRLFDKM 181
I ++ + A GFL EA + + DV W +++ ID + R+ K+
Sbjct: 548 I--CMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKL 605
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALEL 208
T ++ + + + +F EA E+
Sbjct: 606 GPEGTGNFVLLSNIFSAAGRFDEAAEV 632
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 178/561 (31%), Positives = 290/561 (51%), Gaps = 69/561 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIK-KPNLFIWNTII 59
++ K+IHAHL+ + L + + ++ F D++Y Q + F N +I
Sbjct: 22 LRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHITDVHYPCNFLKQFDWSLSSFPCNLLI 81
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G++ P AIL++ V + P T+P++ K+ A+ + Q H VK GL
Sbjct: 82 SGYASGQLPWLAILIY-RWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQFHSVSVKTGL 140
Query: 120 EFDQFIHNTIIYM-------------------------------YANCGFLSEARLMFDE 148
D ++ NT++++ Y G +EA +F
Sbjct: 141 WCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAISLFLR 200
Query: 149 VDTEFDV-----------------------------------VAWNSMIIGLAKCGEIDE 173
++ E +V V N+++ KC + +
Sbjct: 201 MNVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLDMYMKCDSVTD 260
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R++FD+M ++ +SW SMI G V+ +E+L+LF +MQ +P + S+L+ACA
Sbjct: 261 ARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSVLSACAS 320
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LG + G W+H ++ + + + + T ++DMY KCGC + A ++FN +P K + WN+
Sbjct: 321 LGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNIRTWNAY 380
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-Y 352
+ GLA+NGY EA+K F L S +P+ ++F+AV TAC H+G V++ + YF MT Y
Sbjct: 381 IGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLVDEGRKYFNEMTSPLY 440
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+ P ++HY CMVD L RAGL+ EA +LI++MP PD I G+LLS+ +GN+ ++
Sbjct: 441 NLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQILGALLSSRNTYGNVGFTQEM 500
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
K + ++ +S YVL+SNLYA + ++ E R LMK+ I K PG S+I VDG HE
Sbjct: 501 LKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRRLMKQKGISKAPGSSIIRVDGMSHE 560
Query: 473 FVAGGRLHPKAPEVYLLLNDL 493
F+ G HP++ E+Y+LLN L
Sbjct: 561 FLVGDNSHPQSEEIYVLLNIL 581
>gi|242063604|ref|XP_002453091.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
gi|241932922|gb|EES06067.1| hypothetical protein SORBIDRAFT_04g038305 [Sorghum bicolor]
Length = 514
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 264/467 (56%), Gaps = 25/467 (5%)
Query: 51 NLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQLG----LAR 105
+ F+ N ++R + P A+ LF + P +P T+ L KA A L
Sbjct: 38 DRFLPNQLLRSLIPAH-PLGALRLFPRLRRIFPDFRPNNYTFSFLLKAAADSSAPPSLGP 96
Query: 106 D---GAQ-----LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV--DTEFDV 155
D GA LH V + ++ N +I+ YA G + AR +F++ DV
Sbjct: 97 DYPFGAHAIVPSLHALAVVLAWDAHAYVANGLIHAYATHGVVPSARRLFEDALASRAADV 156
Query: 156 VAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ 215
+W S++ AK G+++E+R LFD M RN V+W++M+S YV F +A+ LF +M
Sbjct: 157 CSWTSLLTACAKAGQVEEARALFDGMPRRNDVAWSAMLSAYVAAGSFDDAVRLFEDMLRS 216
Query: 216 NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF------ELNTIVVTAIIDMYCKC 269
++P+ +V +L AC LGA+ QG W+H LV+ ++ +V TA++DMY KC
Sbjct: 217 GVRPNRAAVVGVLAACGALGALDQGRWVHALLVSGTHGGDGATAMDGVVATALVDMYAKC 276
Query: 270 GCPERALQVFNTVP---KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
G + A QVF ++ + + +M+ GL+ +G EAI LF +Q+ ++P+ ++FI
Sbjct: 277 GSLDTARQVFAAAAPRSQRDVFAYTAMISGLSDHGRCGEAIDLFGQMQAEGVRPNEVTFI 336
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
VLTAC +G V +AK+ F M + ++P ++HY C+VD LGRAGLL EA + +RSM
Sbjct: 337 CVLTACGRAGLVGRAKEVFRSMAAVHGMEPGVEHYGCLVDVLGRAGLLAEAMETVRSMTM 396
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
PDA + G+LL+AC HG++E +Q + + EL + S +V +SN+YA ++EE ++
Sbjct: 397 RPDAYVLGALLNACAAHGDVEAGEQVVRWLAELGLDHSGVHVQLSNMYAGWSKWEEVLKV 456
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
R M + K+ K PGCS++EVDG EFVAG R HP+ E+ + DL
Sbjct: 457 RRTMDQRKVAKVPGCSMLEVDGVASEFVAGDRSHPRMQEIMSAIRDL 503
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 129/314 (41%), Gaps = 48/314 (15%)
Query: 17 AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFI 76
A D + + +L C AG + A +F + + N W+ ++ + + + +A+ LF
Sbjct: 153 AADVCSWTSLLTACAK-AGQVEEARALFDGMPRRNDVAWSAMLSAYVAAGSFDDAVRLFE 211
Query: 77 DMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK------QGLEFDQFIHNTII 130
DML S ++P R + A LG G +H +V D + ++
Sbjct: 212 DML-RSGVRPNRAAVVGVLAACGALGALDQGRWVHALLVSGTHGGDGATAMDGVVATALV 270
Query: 131 YMYANCGFLSEARLMFDEV--DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM----VSR 184
MYA CG L AR +F ++ DV A+ +MI GL+ G E+ LF +M V
Sbjct: 271 DMYAKCGSLDTARQVFAAAAPRSQRDVFAYTAMISGLSDHGRCGEAIDLFGQMQAEGVRP 330
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM-------------------------------- 212
N V++ +++ R A E+FR M
Sbjct: 331 NEVTFICVLTACGRAGLVGRAKEVFRSMAAVHGMEPGVEHYGCLVDVLGRAGLLAEAMET 390
Query: 213 -QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
+ ++P + + +LLNACA G + GE + +L + + + V + +MY
Sbjct: 391 VRSMTMRPDAYVLGALLNACAAHGDVEAGEQVVRWLAELGLDHSGVHVQ-LSNMYAGWSK 449
Query: 272 PERALQVFNTVPKK 285
E L+V T+ ++
Sbjct: 450 WEEVLKVRRTMDQR 463
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 278/499 (55%), Gaps = 40/499 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +HAHL+ GLA+ A+++++F T G ++ A +F +I N+ W + ++
Sbjct: 823 RALHAHLVIIGLARLTYFAAKLMSFYTE-CGQLSNARKLFDKIPNTNIRRWIVLTGACAR 881
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ F +M ++P + PS+ KA L R G +H ++K E D +
Sbjct: 882 RGFYEEALSAFSEMQ-KEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAY 940
Query: 125 IHNTIIYMYANCGFLSEARLMFDE-VDTEF------------------------------ 153
I + +IYMY+ CG + +A +FD VD +
Sbjct: 941 IISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAG 1000
Query: 154 ---DVVAWNSMIIGLAKCGEIDESRRLFDKM----VSRNTVSWNSMISGYVRNVKFKEAL 206
+VV+WN++I G ++ G+ +F M V + VSW S+ISG+V+N E
Sbjct: 1001 VKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGF 1060
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
+ F+EM +Q PS T+ SLL AC + +R G+ IH + + E + V +A++DMY
Sbjct: 1061 DAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMY 1120
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG A +F +P++ WNS++FG A +GY NEAI+LF+ ++ S+ K D+++F
Sbjct: 1121 AKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFT 1180
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
AVL AC+H+G V + F M E Y+I+P ++HY+CMVD LGRAG L EA LI++MP
Sbjct: 1181 AVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPV 1240
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
+PD +WG+LL ACR HGNIE+A+ AA+ + EL+ +L+SNLYA + ++ A +
Sbjct: 1241 EPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKM 1300
Query: 447 RLLMKEVKIEKEPGCSLIE 465
+ +MK+ K K PGCS IE
Sbjct: 1301 KKMMKQRKFGKFPGCSWIE 1319
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 163/502 (32%), Positives = 275/502 (54%), Gaps = 35/502 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++ K++HAH++K + + +L S G + A +VF +++ N+ W I
Sbjct: 230 IQEGKQLHAHVVKMQYLSETAVGNALLTL-YSKCGMMEEAEIVFESLRQRNIISWTASIN 288
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GF Q + A+ F M+ S I+P T+ + + + DG H +V+K+G+
Sbjct: 289 GFYQHGDFKKALKQF-SMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMA 347
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
F+ II MY+ GL GE+DE+ + F +
Sbjct: 348 SGVFVGTAIIDMYS-----------------------------GL---GEMDEAEKQFKQ 375
Query: 181 M-VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M + + VSWN++I+GYV N K ++A+E F M ++++ +EFT ++ AC+ ++
Sbjct: 376 MGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLAT 435
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
IH+ L+ + E N V +++I+ Y +CG E A+QVF + + WNS++ +
Sbjct: 436 TVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQ 495
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG +AI L + KP +F+ VL+AC+HSG V + +++F M + Y I+P
Sbjct: 496 NGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEET 555
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
H SCMVD LGRAG LE A I+ + P A IW LL+ACR + N++MA+ A++I++L
Sbjct: 556 HCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDL 615
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ N++ YV +SN+YA ++ +A +R LM++ +I KEPGCS IEV+ ++++F + +
Sbjct: 616 EPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKA 675
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+ P+VY L L IQ++G
Sbjct: 676 HPEMPKVYEKLKQLVRQIQDIG 697
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 175/387 (45%), Gaps = 44/387 (11%)
Query: 86 PQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLM 145
P R S + G G + H VVK GL D+F+ ++I MYA
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYA----------- 159
Query: 146 FDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEA 205
KCGE+D + R++DKM S + + N +IS Y RN F +A
Sbjct: 160 ---------------------KCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQA 198
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
++F ++ +P+ +T ++L C + AI++G+ +H +V + T V A++ +
Sbjct: 199 FQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTL 258
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y KCG E A VF ++ ++ + W + + G +G +A+K FS ++ S ++P+ +F
Sbjct: 259 YSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTF 318
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYK--IKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
VL +C G V D T+ K + + + ++D G ++EAEK +
Sbjct: 319 SIVLASC---GCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQ 375
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEE- 442
M + W +L++ + IE A +A ++++ D +C SN++ A F
Sbjct: 376 MGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDV--ACNEFTYSNIFKACSSFPSL 433
Query: 443 ----AMEERLLMKEVKIEKEPGCSLIE 465
+ RL+ V+ SLIE
Sbjct: 434 ATTVQIHSRLIKSNVESNLHVASSLIE 460
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 153/345 (44%), Gaps = 36/345 (10%)
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
N ++ ++ Q TY YA+ G LH +V GL + +
Sbjct: 785 NVYRVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKL 844
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 189
+ Y CG LS AR +LFDK+ + N W
Sbjct: 845 MSFYTECGQLSNAR--------------------------------KLFDKIPNTNIRRW 872
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
+ R ++EAL F EMQ++ ++P++F + S+L AC L R GE +H ++
Sbjct: 873 IVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILK 932
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
N FE + +++A+I MY KCG E+A +VF+ + K L N+MV G A +G+ +EA+ L
Sbjct: 933 NSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBL 992
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
+Q + +KP+ +S+ ++ + G + + F LMT ++P + ++ ++
Sbjct: 993 VQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTAN-GVEPDVVSWTSVISGFV 1051
Query: 370 RAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIEMAKQ 411
+ E + M P ++ SLL AC N+ K+
Sbjct: 1052 QNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKE 1096
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 196/435 (45%), Gaps = 38/435 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++ H ++K GL D + ++ + G+++ A V+ ++ + N +I +++
Sbjct: 133 RRWHCFVVKIGLGSDEFVCTSLIDM-YAKCGEVDSAVRVYDKMTSLDAATCNCLISAYAR 191
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A +F+ + +P TY ++ + ++G QLH VVK +
Sbjct: 192 NGFFVQAFQVFMQ-IGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETA 250
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ +Y+ CG + EA ++F+ + + ++++W + I G + G+
Sbjct: 251 VGNALLTLYSKCGMMEEAEIVFESL-RQRNIISWTASINGFYQHGD-------------- 295
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
FK+AL+ F M+E I+P+EFT +L +C + G H
Sbjct: 296 -----------------FKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFH 338
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC-WNSMVFGLAMNGYE 303
++ V TAIIDMY G + A + F + + + WN+++ G +N
Sbjct: 339 TQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKI 398
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+A++ F + ++ + ++ + AC+ + + + ++ ++ ++ S
Sbjct: 399 EKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKS-NVESNLHVASS 457
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+++A + G LE A ++ + SD D + W S++ A ++G+ A +++IE + N+
Sbjct: 458 LIEAYTQCGSLENAVQVFTQI-SDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIE-EGNK 515
Query: 424 SCGYVLMSNLYAASY 438
++ L A S+
Sbjct: 516 PTSXTFLTVLSACSH 530
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 262/467 (56%), Gaps = 32/467 (6%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + YA VF + N W+ +I GF S A LLF ML + S
Sbjct: 287 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA 346
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
+A A L R G QLH + K G+ D N+++ MYA
Sbjct: 347 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA-------------------- 386
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
K G ID++ LFD+M ++TVS+++++SGYV+N + +EA +F++MQ
Sbjct: 387 ------------KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 434
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
N++P TMVSL+ AC+ L A++ G H ++ T + A+IDMY KCG +
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
+ QVFN +P + + WN+M+ G ++G EA LF + + PD ++FI +L+AC+H
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 554
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
SG V + K +F +M Y + P ++HY CMVD L R G L+EA + I+SMP D +W
Sbjct: 555 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 614
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
+LL ACR + NI++ K+ ++ I EL + +VL+SN+Y+A+ +F+EA E R++ K
Sbjct: 615 ALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG 674
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+K PGCS IE++G +H FV G + HP++PE+Y L+++ + I+++G
Sbjct: 675 FKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLG 721
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 199/420 (47%), Gaps = 34/420 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH H I GL D ++ +L A + A+ +F + +L WN ++ G++
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAH-IFATMPARDLVAWNAMLAGYAH 203
Query: 65 SSTPRNAILLFIDM-LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+A+ + M + ++P T +L AQ G G +H ++ L ++
Sbjct: 204 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 263
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL-AKCGEIDESRRLFDKMV 182
S+++L D V + ++ + AKCG + +RR+FD M
Sbjct: 264 N---------------SKSKLT--------DGVLLGTALLDMYAKCGSLLYARRVFDAMP 300
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLLNACAKLGAIRQGE 241
+RN V+W+++I G+V + +A LF+ M Q + S ++ S L ACA L +R GE
Sbjct: 301 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 360
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H L + + +++ MY K G ++A+ +F+ + K ++++V G NG
Sbjct: 361 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 420
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK-DYFTLMTETYKIKPSIKH 360
EA +F +Q+ N++PD + ++++ AC+H + + + +++ + SI
Sbjct: 421 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI-- 478
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ ++D + G ++ + ++ MPS D + W ++++ HG + K+A +E++
Sbjct: 479 CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG---LGKEATALFLEMN 534
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 174/391 (44%), Gaps = 50/391 (12%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS--TPRNAILLFIDMLVTSPIQPQRLTY 91
+G ++ A+ +F QI P++ +N +IR +S SS + + L+ ML + P T+
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRML-RHRVAPNNYTF 128
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
P KA + L G +H + GL+ D F+ ++ MY C L +A +F +
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
D+VAWN+M+ G A G M SM +
Sbjct: 189 R-DLVAWNAMLAGYAHHG-----------MYHHAVAHLLSM------------------Q 218
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN----------TIVVTA 261
MQ ++P+ T+V+LL A+ GA+ QG +H + + C N ++ TA
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 278
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN---L 318
++DMY KCG A +VF+ +P + W++++ G + +A LF + + L
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
P I+ + L AC + + L+ ++ + + + ++ +AGL+++A
Sbjct: 339 SPTSIA--SALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAI 395
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
L M + D + + +L+S ++G E A
Sbjct: 396 ALFDEM-AVKDTVSYSALVSGYVQNGRAEEA 425
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 278/467 (59%), Gaps = 7/467 (1%)
Query: 36 DINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLF 95
D+ A F + + ++ WN ++ G++Q+ + LF D +V + I+P T+ ++
Sbjct: 209 DLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLF-DEMVNAGIEPDETTWVTVI 267
Query: 96 KAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDV 155
A + G A L + ++ ++ + F+ ++ MYA CG + AR +FDE+ +
Sbjct: 268 SACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNS 327
Query: 156 VAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QE 214
V WN+MI + G +D +R LF+ M RN V+WNSMI+GY +N + A+ELF+EM
Sbjct: 328 VTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITA 387
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+ + P E TMVS+++AC LGA+ G W+ FL N +L+ A+I MY +CG E
Sbjct: 388 KKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMED 447
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A +VF + + + +N+++ G A +G+ EAI L S ++ ++PD ++FI VLTAC+H
Sbjct: 448 AKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSH 507
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+G + + + F + + P+I HY+CMVD LGR G LE+A++ + MP +P A ++G
Sbjct: 508 AGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYG 562
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
SLL+A R H +E+ + AA ++ EL+ + S ++L+SN+YA++ ++++ R MK+
Sbjct: 563 SLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGG 622
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++K G S +E G++H+F+ R H ++ ++Y LL +L ++E G
Sbjct: 623 VKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAG 669
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 218/467 (46%), Gaps = 73/467 (15%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L+++HA +I L + ++ CT +Y +L+F PN+F++ +++R +S
Sbjct: 17 LRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFYS 76
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+L+F + + ++P YP L K+ G+ H V+K G D
Sbjct: 77 HLQDHAKVVLMF-EHMQGCGVRPDAFVYPILIKSAGNGGIG-----FHAHVLKLGHGSDA 130
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDT-------------------------------- 151
F+ N +I MYA G + AR +FDE+
Sbjct: 131 FVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMP 190
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
E +V+ W +M+ G AK +++ +RR FD M R+ VSWN+M+SGY +N +E L LF E
Sbjct: 191 ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDE 250
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M I+P E T V++++AC+ G + L +LN V TA++DMY KCG
Sbjct: 251 MVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGS 310
Query: 272 P--------------------------------ERALQVFNTVPKKGLSCWNSMVFGLAM 299
+ A ++FNT+P + + WNSM+ G A
Sbjct: 311 IGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQ 370
Query: 300 NGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
NG AI+LF + + L PD ++ ++V++AC H G + +TE +IK SI
Sbjct: 371 NGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN-QIKLSI 429
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
++ M+ R G +E+A+++ + M + D + + +L+S HG+
Sbjct: 430 SGHNAMIFMYSRCGSMEDAKRVFQEMAT-RDVVSYNTLISGFAAHGH 475
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 169/495 (34%), Positives = 277/495 (55%), Gaps = 34/495 (6%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H+ +IKTG D + ++ S G + A VF +I + N+ W II G+ +S
Sbjct: 124 LHSLVIKTGFDWDVFVKTGLVCL-YSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESG 182
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A+ LF +L ++P T + A +++G G + G + + G + F+
Sbjct: 183 CFGEALGLFRGLLEMG-LRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVA 241
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+++ MYA KCG ++E+RR+FD MV ++
Sbjct: 242 TSLVDMYA--------------------------------KCGSMEEARRVFDGMVEKDV 269
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
V W+++I GY N KEAL++F EMQ +N++P + MV + +AC++LGA+ G W
Sbjct: 270 VCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGL 329
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ + F N ++ TA+ID Y KCG +A +VF + +K +N+++ GLAM G+ A
Sbjct: 330 MDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAA 389
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+F + ++PD +F+ +L C H+G V+ YF+ M+ + + P+I+HY CMVD
Sbjct: 390 FGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVD 449
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
RAGLL EA+ LIRSMP + ++I+WG+LL CR H + ++A+ KQ+IEL+ S
Sbjct: 450 LQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGH 509
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
YVL+SN+Y+AS++++EA + R + + ++K PGCS +EVDG VHEF+ G HP + ++
Sbjct: 510 YVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKI 569
Query: 487 YLLLNDLGLLIQEMG 501
Y L L ++E G
Sbjct: 570 YEKLESLFKDLREAG 584
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 212/417 (50%), Gaps = 39/417 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+ H L++ GL +D + +L A YA +VF Q PN+F++NT+IRG
Sbjct: 20 KQCHCLLLRLGLHQDTYLINLLLRSSLHFAA-TQYATVVFAQTPHPNIFLYNTLIRGMVS 78
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL-GLARDGAQLHGRVVKQGLEFDQ 123
+ R+A+ ++ M P T+P + KA +L G LH V+K G ++D
Sbjct: 79 NDAFRDAVSVYASMR-QHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDV 137
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ ++ +Y+ GFL++AR +FDE+ E +VV+W
Sbjct: 138 FVKTGLVCLYSKNGFLTDARKVFDEI-PEKNVVSW------------------------- 171
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
++I GY+ + F EAL LFR + E ++P FT+V +L AC+++G + G WI
Sbjct: 172 ------TAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWI 225
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
++ + N V T+++DMY KCG E A +VF+ + +K + CW++++ G A NG
Sbjct: 226 DGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMP 285
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT-ETYKIKPSIKHYS 362
EA+ +F +Q N++PD + + V +AC+ G + LM + + P + +
Sbjct: 286 KEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG--T 343
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
++D + G + +A+++ + M D +++ +++S G++ A Q++++
Sbjct: 344 ALIDFYAKCGSVAQAKEVFKGMRR-KDCVVFNAVISGLAMCGHVGAAFGVFGQMVKV 399
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 104/274 (37%), Gaps = 39/274 (14%)
Query: 224 MVSLLNACAKLG--AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
M S L C G ++ Q + H L+ +T ++ ++ + A VF
Sbjct: 1 MGSELKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQ 60
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN-------- 333
P + +N+++ G+ N +A+ +++ ++ PD +F VL AC
Sbjct: 61 TPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHV 120
Query: 334 ----HSGKVNQAKDYFT--------------LMTETYKI-----KPSIKHYSCMVDALGR 370
HS + D+ +T+ K+ + ++ ++ ++
Sbjct: 121 GLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIE 180
Query: 371 AGLLEEAEKLIRS---MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGY 427
+G EA L R M PD+ +L AC + G++ + + E + S G
Sbjct: 181 SGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRE---SGSVGN 237
Query: 428 VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGC 461
V ++ Y +MEE + + +EK+ C
Sbjct: 238 VFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVC 271
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 282/502 (56%), Gaps = 34/502 (6%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVF---TQIKKP---NLFIWNTII 59
+IH+ ++K GL +P+ ++ A +S ++YA V Q P + F++NT+I
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAA-TSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLI 198
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R F+Q++ + L F + + + P + T+P + KA A + G +H +VK G
Sbjct: 199 RAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGF 258
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D + NT+++MY C G + ++++FD
Sbjct: 259 EEDPHVRNTLVHMYCCC--------------------------CQDGSSGPV-SAKKVFD 291
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+ +++V+W++MI GY R A+ LFREMQ + P E TMVS+L+ACA LGA+
Sbjct: 292 ESPVKDSVTWSAMIGGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALEL 351
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+W+ +++ + + A+IDM+ KCG +RA++VF + + + W SM+ GLAM
Sbjct: 352 GKWLESYIERKNIMRSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAM 411
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G EA+ +F + + PD ++FI VL+AC+HSG V++ YF M + I P I+
Sbjct: 412 HGRGLEAVLVFDEMMEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIE 471
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD L RAG + EA + +R+MP +P+ +IW S+++AC G +++ + AK++I
Sbjct: 472 HYGCMVDMLSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRR 531
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ + YVL+SN+YA ++E+ + R +M + K PG ++IE++ E++EFVAG +
Sbjct: 532 EPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKS 591
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
H + E+Y ++ ++G I+ G
Sbjct: 592 HDQYKEIYEMVEEMGREIKRAG 613
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 163/430 (37%), Positives = 253/430 (58%), Gaps = 6/430 (1%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL--GLARDGAQLHG 112
W + I +++ A F DM + S ++P +T+ +L G LHG
Sbjct: 30 WTSRITLLTRNGRLAEAAKXFSDMRL-SGVEPNHITFIALLSGCGDFPSGSETLSNLLHG 88
Query: 113 RVVKQGLEFDQFIHNT-IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
K GL+ + T II MY+ G + +ARL+FD ++ + + V WN+MI G + G++
Sbjct: 89 YACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYME-DINSVTWNTMIDGYMRSGQV 147
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
D + ++FDKM R+ +SW +MI+G+V+ +EAL FREMQ ++P +++ LNAC
Sbjct: 148 DNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALNAC 207
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
LGA+ G W+H +++ F+ N V ++ID+YC+CGC E A +VF+ + K+ + WN
Sbjct: 208 TNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWN 267
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
S++ G A NG +E++ F +Q KPD ++F LTAC+H G V + YF M
Sbjct: 268 SVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRD 327
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAK 410
Y I P I+HY C+VD RAG LE+A K+I SMP P+ ++ GSLL+ACR HG N +A+
Sbjct: 328 YGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACRTHGNNTVLAE 387
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
+ K + +L+ YV++SN+YAA ++E A + R MK + ++K+PG S IE+D
Sbjct: 388 RLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPGFSSIEIDDCT 447
Query: 471 HEFVAGGRLH 480
H F+AG H
Sbjct: 448 HVFMAGDSAH 457
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 121/270 (44%), Gaps = 52/270 (19%)
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC------ 231
++ S TVSW S I+ RN + EA + F +M+ ++P+ T ++LL+ C
Sbjct: 19 LNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSG 78
Query: 232 --------------------------------AKLGAIRQGEWIHNFLVTNCFELNTIVV 259
+K G +++ + +++ ++N++
Sbjct: 79 SETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYME----DINSVTW 134
Query: 260 TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK 319
+ID Y + G + A+++F+ +P++ L W +M+ G G+ EA+ F +Q S ++
Sbjct: 135 NTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVR 194
Query: 320 PDYISFIAVLTACNHSGKVNQAKDYFTLMTETY----KIKPSIKHYSCMVDALGRAGLLE 375
PDY++ IA L AC + G ++ F L Y K +++ + ++D R G +E
Sbjct: 195 PDYVAIIAALNACTNLGALS-----FGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVE 249
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
A ++ M + W S++ +GN
Sbjct: 250 FAREVFDKMEKRT-VVSWNSVIVGFAANGN 278
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 121/310 (39%), Gaps = 63/310 (20%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL + + + S G + A LVF ++ N WNT+I G+ +S
Sbjct: 86 LHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMRSG 145
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
NA+ +F M + S ++P + +
Sbjct: 146 QVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALN 205
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A LG G +H V+ Q + + + N++I +Y CG + AR +FD+++ VV
Sbjct: 206 ACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKR-TVV 264
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G ES L FR+MQE+
Sbjct: 265 SWNSVIVGFAANGNAHES-------------------------------LVYFRKMQEEG 293
Query: 217 IKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
KP T L AC+ +G + +G + ++D+Y + G E A
Sbjct: 294 FKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDA 353
Query: 276 LQVFNTVPKK 285
L+V ++P K
Sbjct: 354 LKVIESMPMK 363
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 14/180 (7%)
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G P+ +Q N + W S + L NG EA K FS ++ S ++P++I+FIA+L
Sbjct: 12 GXPK--IQRLNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALL 69
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA-----LGRAGLLEEAEKLIRSM 384
+ C G + + + Y K + MV + G +++A +L+
Sbjct: 70 SGC---GDFPSGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKA-RLVFDY 125
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
D +++ W +++ + G ++ A K ++ + + + M N + EEA+
Sbjct: 126 MEDINSVTWNTMIDGYMRSGQVD---NAVKMFDKMPERDLISWTAMINGFVKKGFHEEAL 182
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 269/463 (58%), Gaps = 47/463 (10%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G I A +F +I ++ WN +I G++++ + A+ LF +M+ T+ ++P T ++
Sbjct: 155 GYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN-VKPDESTMATV 213
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A AQ G G Q+H + G + I N +I +Y+
Sbjct: 214 VSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYS-------------------- 253
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
KCGE++ + L + + +++ +SWN++I GY +KEAL LF+EM
Sbjct: 254 ------------KCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 301
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL--------VTNCFELNTIVVTAIIDMY 266
P++ TM+S+L ACA LGAI G WIH ++ VTN L T ++IDMY
Sbjct: 302 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRT----SLIDMY 357
Query: 267 CKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
KCG + A QV ++ + LS WN+M+FG AM+G N A +FS ++ + ++PD I+F
Sbjct: 358 AKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITF 417
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ +L+AC+HSG ++ ++ F M + Y I P ++HY CM+D LG +GL +EAE++I +MP
Sbjct: 418 VGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMP 477
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+PD +IW SLL AC+ HGN+E+ + AK++I+++ YVL+SN+YA + ++ E +
Sbjct: 478 MEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXK 537
Query: 446 ERLLMKEVKIEKE-PGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
R L+ + ++K+ PGCS IE+D VHEF+ G +LHP+ E+Y
Sbjct: 538 IRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIY 580
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 33/254 (12%)
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+ + N + WN M G+ + AL+L+ M + P+ FT LL +CAK
Sbjct: 31 VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT--------------- 281
++G+ IH ++ F+L+ V T++I MY + G E A +VF+
Sbjct: 91 FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150
Query: 282 ----------------VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
+P K + WN+M+ G A G +A++LF + +N+KPD +
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
V++AC SG + + + + + + ++K + ++D + G +E A +L+ +
Sbjct: 211 ATVVSACAQSGSIELGRQVHSWIND-HGFGSNLKIVNALIDLYSKCGEVETACELLEGL- 268
Query: 386 SDPDAIIWGSLLSA 399
S+ D I W +L+
Sbjct: 269 SNKDVISWNTLIGG 282
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 276/490 (56%), Gaps = 2/490 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++L++IHA + GL + + S + + G A +F +I P++ + +++
Sbjct: 33 IRELQRIHAQALTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDIISFTSLMS 92
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ AI +F + S +P A LG R G+ +HG + + GL+
Sbjct: 93 LHLKLDHHWKAISVF-SHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLIFRCGLD 151
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ + N ++ MY CG AR +FD + + D V W SM+ G KC +D + F +
Sbjct: 152 SELVVCNALVDMYCRCGKFEPARTVFDRMLVK-DEVTWGSMLYGYMKCVGVDSALSFFYQ 210
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M ++TVSW ++I+G+V++ + +ALELF +M + +P+ T+V +L+ACA +GA+ G
Sbjct: 211 MPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGALDLG 270
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
IH + + N IV A++DMY K G A VF V K W +M+ +
Sbjct: 271 RAIHGYGSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQ 330
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G +A++LF + S + P+ ++F++VL+AC+H+G + + ++ F M E Y I P ++H
Sbjct: 331 GNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEH 390
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGR GLLEEAE LI M +PD +IW SLLSAC HGN +A+ A +II+ +
Sbjct: 391 YGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAGMEIIKRE 450
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ YVL+ N+YA S +++EA++ R M KI K+PGCS IEVDG VHEF+ + H
Sbjct: 451 PGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCSWIEVDGVVHEFLVEDKTH 510
Query: 481 PKAPEVYLLL 490
E+Y+ L
Sbjct: 511 DARREIYVTL 520
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 262/467 (56%), Gaps = 32/467 (6%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + YA VF + N W+ +I GF S A LLF ML + S
Sbjct: 287 GSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA 346
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
+A A L R G QLH + K G+ D N+++ MYA
Sbjct: 347 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA-------------------- 386
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
K G ID++ LFD+M ++TVS+++++SGYV+N + +EA +F++MQ
Sbjct: 387 ------------KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQA 434
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
N++P TMVSL+ AC+ L A++ G H ++ T + A+IDMY KCG +
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
+ QVFN +P + + WN+M+ G ++G EA LF + + PD ++FI +L+AC+H
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 554
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
SG V + K +F +M Y + P ++HY CMVD L R G L+EA + I+SMP D +W
Sbjct: 555 SGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 614
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
+LL ACR + NI++ K+ ++ I EL + +VL+SN+Y+A+ +F+EA E R++ K
Sbjct: 615 ALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG 674
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+K PGCS IE++G +H FV G + HP++PE+Y L+++ + I+++G
Sbjct: 675 FKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLG 721
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 199/420 (47%), Gaps = 34/420 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH H I GL D ++ +L A + A+ +F + +L WN ++ G++
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAH-IFATMPARDLVAWNAMLAGYAH 203
Query: 65 SSTPRNAILLFIDM-LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+A+ + M + ++P T +L AQ G G +H ++ L ++
Sbjct: 204 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNR 263
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGL-AKCGEIDESRRLFDKMV 182
S+++L D V + ++ + AKCG + +RR+FD M
Sbjct: 264 N---------------SKSKLT--------DGVLLGTALLDMYAKCGSLLYARRVFDAMP 300
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLLNACAKLGAIRQGE 241
+RN V+W+++I G+V + +A LF+ M Q + S ++ S L ACA L +R GE
Sbjct: 301 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 360
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H L + + +++ MY K G ++A+ +F+ + K ++++V G NG
Sbjct: 361 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 420
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK-DYFTLMTETYKIKPSIKH 360
EA +F +Q+ N++PD + ++++ AC+H + + + +++ + SI
Sbjct: 421 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI-- 478
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ ++D + G ++ + ++ MPS D + W ++++ HG + K+A +E++
Sbjct: 479 CNALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG---LGKEATALFLEMN 534
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 174/391 (44%), Gaps = 50/391 (12%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS--TPRNAILLFIDMLVTSPIQPQRLTY 91
+G ++ A+ +F QI P++ +N +IR +S SS + + L+ ML + P T+
Sbjct: 70 SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRML-RHRVAPNNYTF 128
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
P KA + L G +H + GL+ D F+ ++ MY C L +A +F +
Sbjct: 129 PFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPA 188
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
D+VAWN+M+ G A G M SM +
Sbjct: 189 R-DLVAWNAMLAGYAHHG-----------MYHHAVAHLLSM------------------Q 218
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN----------TIVVTA 261
MQ ++P+ T+V+LL A+ GA+ QG +H + + C N ++ TA
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTA 278
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN---L 318
++DMY KCG A +VF+ +P + W++++ G + +A LF + + L
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFL 338
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
P I+ + L AC + + L+ ++ + + + ++ +AGL+++A
Sbjct: 339 SPTSIA--SALRACASLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAI 395
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
L M + D + + +L+S ++G E A
Sbjct: 396 ALFDEM-AVKDTVSYSALVSGYVQNGRAEEA 425
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 163/500 (32%), Positives = 287/500 (57%), Gaps = 11/500 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++H + T A ++L F + + YA +F PN+F+++ ++
Sbjct: 22 LAHLKQLHGRSVVTARAASQSTTFQLLRFASLRLSCLPYARRLFDSTPHPNVFLYSAMLS 81
Query: 61 GFSQSSTP----RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG--LARDGAQLHGRV 114
++ +S +A+ LF+ ML P + YP + +A +G L R +H
Sbjct: 82 AYAAASPAQAYGHDALALFLRMLRRGRPAPNQFVYPLVLRAACAIGVQLVR---SIHSHA 138
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
K G I +++ Y+ G + +AR +FD + TE +V++W +++ G A+ G+I ++
Sbjct: 139 CKSGFHAYDVIRTSLLDGYSRYGMMLDARKLFDGL-TERNVISWTALVSGYARAGKIGDA 197
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
LFD+M R+ +WN+MI+G +N F EA+ + M ++ + + T+ +L+AC L
Sbjct: 198 IVLFDRMPERDVAAWNAMITGCTQNGLFVEAVGICSRMVDEGFQLNGTTVSCVLSACGHL 257
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G ++ G+ +H + +C + VV +IDMY KCG + A +F+ + L+ WNS++
Sbjct: 258 GMLKIGKVVHGYAWRSCVGFGSSVVNGLIDMYGKCGNLKEARWMFDEFSDRSLTTWNSLI 317
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
LA++G+ AI +F ++ ++PD ++F+ +L AC H G V++ YF LM + +I
Sbjct: 318 NCLALHGHSKSAIAVFDEMRDEGIEPDVVTFVGLLNACTHGGFVDEGLTYFKLMCDELRI 377
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+P I+HY C+VD LGRAG E+A +I M PD +IWGSLL+ACR H +E+A+ + +
Sbjct: 378 EPEIEHYGCIVDLLGRAGRFEDAMNVINDMKVQPDEVIWGSLLNACRTHRQLELAEFSVR 437
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE-VKIEKEPGCSLIEVDGEVHEF 473
++++L+ N + V+++NLY+ +EE + R LMKE + +K PGCS IEVD + H F
Sbjct: 438 KLLQLNPNNANYVVMLANLYSEGGSWEEVTKIRKLMKEDIMGKKLPGCSWIEVDRKTHRF 497
Query: 474 VAGGRLHPKAPEVYLLLNDL 493
+G HP++ ++Y L++L
Sbjct: 498 YSGDDAHPESEDIYDTLDEL 517
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 290/524 (55%), Gaps = 36/524 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCT------------------------------SPA 34
K +H+H IKT L A+R++ F + S +
Sbjct: 34 KLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYSRS 93
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVT-SPIQPQRLTYPS 93
G N A+ + Q+ KPNL +N++I G + ++ +F ML S + T S
Sbjct: 94 GLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVS 153
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
L + A LG Q+HG + GL + I N +I Y CG + +F + E
Sbjct: 154 LVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSRM-PER 212
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
DVV+W SM+ A+ ++++ LF +M +NTVSW ++I+G+ +N + EAL LF +M+
Sbjct: 213 DVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMR 272
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV-TNCFEL--NTIVVTAIIDMYCKCG 270
E+ I PS FT S+L+ACA L I +G+ IH ++ + C + N ++ A+IDMYCKCG
Sbjct: 273 EEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCG 332
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
A +F + +K + WNS++ G A NG+ E++ +F + ++++P++++F+ +L+
Sbjct: 333 QMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLS 392
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC H+G V++ M + Y + P HY+ M+D LGR LEEA LI+ P D
Sbjct: 393 ACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRAPKGSDH 452
Query: 391 I-IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
+ +WG+LL ACR HGN+++A++AA+ + +L+ + YV++ N+YAA+ +++EA + R L
Sbjct: 453 VGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAAASRWDEARQVRRL 512
Query: 450 MKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
M E + KE CS IEV H+FVA R H + EVY ++++L
Sbjct: 513 MMERGLRKEAACSWIEVRNTRHQFVAKERSHCQINEVYEVIHNL 556
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 172/379 (45%), Gaps = 47/379 (12%)
Query: 82 SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSE 141
S + P Y SL + G LH +K L F F+ N +I Y+ C +
Sbjct: 8 SSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQS 67
Query: 142 ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVK 201
A +F + + + +WN +I ++ G +E+ L D+M N VS+NS+ISG +
Sbjct: 68 AHKVFHVLPVK-NTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGF 126
Query: 202 FKEALELFREMQEQ--NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV 259
KE+L +F+ M +Q N+ EFT+VSL+ +CA LGA +H + N I+
Sbjct: 127 RKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIG 186
Query: 260 TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV------------------------- 294
A+ID Y KCG P+ + +F+ +P++ + W SMV
Sbjct: 187 NALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTV 246
Query: 295 ------FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
G A NG +EA+ LF ++ + P +F +VL+AC + + K+
Sbjct: 247 SWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKE----- 301
Query: 349 TETYKIKPSIKHYSC-------MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
+ I+ + Y C ++D + G + A L + M + D + W SL++
Sbjct: 302 IHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGM-HEKDIVSWNSLITGFA 360
Query: 402 KHGNIEMAKQAAKQIIELD 420
++G+ E + +++IE D
Sbjct: 361 QNGHGEESLAVFERMIEAD 379
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 284/500 (56%), Gaps = 8/500 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA +I++ DP AS ++ + G A VF+ ++ N W +I GF Q
Sbjct: 314 KQLHAQVIRSLPCIDPYVASAMVEL-YAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQ 372
Query: 65 SSTPRNAILLFIDML--VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++ LF M + + Q T S + LAR QLH +K G
Sbjct: 373 YGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLAR---QLHSLSLKSGHTRA 429
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
I N++I MYA CG L A +F ++ E D+V+W M+ ++ G I ++R FD M
Sbjct: 430 VVISNSLISMYAKCGNLQNAESIFSSME-ERDIVSWTGMLTAYSQVGNIGKAREFFDGMS 488
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+RN ++WN+M+ Y+++ ++ L+++ M E+++ P T V+L CA +GA + G+
Sbjct: 489 TRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGD 548
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
I V L+T V+ A+I MY KCG A ++F+ + +K L WN+M+ G + +G
Sbjct: 549 QITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHG 608
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+AI++F + KPDYIS++AVL++C+HSG V + K YF ++ + + P ++H+
Sbjct: 609 MGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHF 668
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
SCMVD L RAG L EA+ LI MP P A +WG+LLSAC+ HGN E+A+ AAK + +LD
Sbjct: 669 SCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDS 728
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+S GY+L++ +YA + + ++ + R LM++ I+K PG S +EV +VH F A HP
Sbjct: 729 PDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHP 788
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
+ + L++L I ++G
Sbjct: 789 QVIAIREKLDELMEKIAQLG 808
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 202/401 (50%), Gaps = 3/401 (0%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRN 70
L++ + + + I+ + G ++ A +F ++ + ++ WNT++ G+ QS +
Sbjct: 85 LLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLD 144
Query: 71 AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTII 130
A+ F+ M + P T+ K+ LG QL G + K G + D + I+
Sbjct: 145 AMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIV 204
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
M+ CG + A F +++ V NSM+ G AK +D + LF+ M R+ VSWN
Sbjct: 205 DMFVRCGAVDFASKQFSQIERP-TVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWN 263
Query: 191 SMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN 250
M+S ++ + +EAL + +M + ++ T S L ACAKL ++ G+ +H ++ +
Sbjct: 264 MMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS 323
Query: 251 CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLF 310
++ V +A++++Y KCGC + A +VF+++ + W ++ G G +E+++LF
Sbjct: 324 LPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELF 383
Query: 311 SGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGR 370
+ +++ + D + +++ C++ + A+ +L ++ + + S ++ +
Sbjct: 384 NQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNS-LISMYAK 442
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
G L+ AE + SM + D + W +L+A + GNI A++
Sbjct: 443 CGNLQNAESIFSSM-EERDIVSWTGMLTAYSQVGNIGKARE 482
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 165/349 (47%), Gaps = 42/349 (12%)
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
HGR+V GL F+ NT+++ Y +CG L +AR + TE +V+ N M+ G AK G
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLLN 229
+ ++ LF +M R+ SWN+++SGY ++ +F +A+E F M+ P+ FT +
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC------------------ 271
+C LG + L F+ + V T I+DM+ +CG
Sbjct: 171 SCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFC 230
Query: 272 -------------PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
+ AL++F ++P++ + WN MV L+ +G EA+ + + + +
Sbjct: 231 RNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGV 290
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLEE 376
+ D ++ + LTAC + K L + + P I Y S MV+ + G +E
Sbjct: 291 RLDSTTYTSSLTACAKLSSLGWGKQ---LHAQVIRSLPCIDPYVASAMVELYAKCGCFKE 347
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHG----NIEMAKQAAKQIIELDK 421
A ++ S+ D + + W L+ ++G ++E+ Q +++ +D+
Sbjct: 348 ARRVFSSL-RDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQ 395
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 273/484 (56%), Gaps = 35/484 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH L+++G A D +S ++ G + A VF QI++ N+ WN++I G+S
Sbjct: 227 KEIHMELVRSGFALDGFVSSALVDM-YGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSL 285
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ I LF M I+P T S+ A ++ + G +HG +++ +E D F
Sbjct: 286 KGDSKSCIELFRRM-DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIF 344
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+++++I +Y KCG I + +F M
Sbjct: 345 VNSSLIDLYF--------------------------------KCGNIGSAENVFQNMPKT 372
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSWN MISGYV+ + EAL +F +M++ +KP T S+L AC++L + +G+ IH
Sbjct: 373 NVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIH 432
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
NF++ + E+N +V+ A++DMY KCG + AL +FN +P++ W SM+ +G
Sbjct: 433 NFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAF 492
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+KLF +Q S+ KPD ++F+A+L+AC+H+G V++ YF M Y KP+++HYSC+
Sbjct: 493 EALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCL 552
Query: 365 VDALGRAGLLEEAEKLIRSMPS-DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+D LGR G L EA ++++ P D + +L SAC H +++ +Q + +IE D ++
Sbjct: 553 IDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDD 612
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
Y+++SN+YA+ +++E + RL +KE+ ++K PGCS IEV +H FV + HP+A
Sbjct: 613 PSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQA 672
Query: 484 PEVY 487
+Y
Sbjct: 673 DMIY 676
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 222/482 (46%), Gaps = 72/482 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKP-NLFIWNTII 59
+K K IH ++ GL ++ I + L A LVF I+ P ++ +WN ++
Sbjct: 19 LKQGKLIHQKIVSLGL-QNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLM 77
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+++ + +F +L ++P TYPS+ KA + LG G +H V+K G
Sbjct: 78 AACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGF 137
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D + ++ + MYA KC +++ +LFD
Sbjct: 138 AMDVVVMSSAVGMYA--------------------------------KCNVFEDAIKLFD 165
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M R+ SWN++IS Y ++ + ++ALELF EM+ KP T+ +++++CA+L + +
Sbjct: 166 EMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLER 225
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ IH LV + F L+ V +A++DMY KCGC E A +VF + +K + WNSM+ G ++
Sbjct: 226 GKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSL 285
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
G I+LF + ++P + ++L AC+ S + K + +++ I
Sbjct: 286 KGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRN-RVEADIF 344
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPS--------------------------------- 386
S ++D + G + AE + ++MP
Sbjct: 345 VNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAG 404
Query: 387 -DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE--LDKNESCGYVLMSNLYAASYQFEEA 443
PDAI + S+L AC + +E K+ IIE L+ NE L+ ++YA +EA
Sbjct: 405 VKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALL-DMYAKCGAVDEA 463
Query: 444 ME 445
+
Sbjct: 464 LH 465
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
++SLL C ++QG+ IH +V+ + N + ++I++Y C + A VF T+
Sbjct: 6 LLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIE 65
Query: 284 KK-GLSCWNSMVFGLAMNGYENEAIKLFSG-LQSSNLKPDYISFIAVLTACNHSGKVNQA 341
++ WN ++ N E +++F L LKPD ++ +VL AC+ G+V
Sbjct: 66 NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 125
Query: 342 KDYFTLMTETYKIKP----SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLL 397
K M T+ IK + S V + + E+A KL MP + D W +++
Sbjct: 126 K-----MVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMP-ERDVASWNNVI 179
Query: 398 SACRKHGNIEMA 409
S + G E A
Sbjct: 180 SCYYQDGQPEKA 191
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/496 (35%), Positives = 280/496 (56%), Gaps = 43/496 (8%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++HA IK+ ++ S++ F SP+GD+NYA L+ N + +NTIIR +S
Sbjct: 6 QLHAQFIKSQNQRN---FSKLFTFAAQSPSGDLNYARLLLNTNPSLNSYYYNTIIRAYSH 62
Query: 65 SSTPRN---AILLFIDMLV--TSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+S P + A+ LFI ML T+ +P TY K+ +L L + QLHG + K G
Sbjct: 63 TSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGF 122
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
FD +I N +I+MY+ + GE+ +R++FD
Sbjct: 123 GFDLYIQNALIHMYS--------------------------------EIGELVIARQVFD 150
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M R+ VSW SMI+G+V + EA++LF+ M E + +E T++S+L CA GA+
Sbjct: 151 RMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSV 210
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G +H + + V TA+I MY KCGC E A +VF+ V + + W +M++GLA
Sbjct: 211 GRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLAC 270
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G EAI+LF +++ N+KPD + + VL+A ++G V + +F + + Y +KP+IK
Sbjct: 271 HGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIK 330
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK--QII 417
H+ CMVD L + G LEEAE I +MP PDA+IW +L+ AC+ H + E A++ K ++
Sbjct: 331 HFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMKHLELQ 390
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+ ++S Y+L SN+YA++ ++ + E R LM + + K PG S IEVDG VHEFV G
Sbjct: 391 GMSAHDSGSYILASNVYASTGKWCDKAEVRELMNKKGLVKPPGSSRIEVDGVVHEFVMGD 450
Query: 478 RLHPKAPEVYLLLNDL 493
HP ++++ L+ +
Sbjct: 451 YDHPDTEKIFIKLDQM 466
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 273/484 (56%), Gaps = 35/484 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH L+++G A D +S ++ G + A VF QI++ N+ WN++I G+S
Sbjct: 419 KEIHMELVRSGFALDGFVSSALVDM-YGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSL 477
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ I LF M I+P T S+ A ++ + G +HG +++ +E D F
Sbjct: 478 KGDSKSCIELFRRM-DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIF 536
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+++++I +Y KCG I + +F M
Sbjct: 537 VNSSLIDLYF--------------------------------KCGNIGSAENVFQNMPKT 564
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSWN MISGYV+ + EAL +F +M++ +KP T S+L AC++L + +G+ IH
Sbjct: 565 NVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIH 624
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
NF++ + E+N +V+ A++DMY KCG + AL +FN +P++ W SM+ +G
Sbjct: 625 NFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAF 684
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+KLF +Q S+ KPD ++F+A+L+AC+H+G V++ YF M Y KP+++HYSC+
Sbjct: 685 EALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCL 744
Query: 365 VDALGRAGLLEEAEKLIRSMPS-DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+D LGR G L EA ++++ P D + +L SAC H +++ +Q + +IE D ++
Sbjct: 745 IDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDD 804
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
Y+++SN+YA+ +++E + RL +KE+ ++K PGCS IEV +H FV + HP+A
Sbjct: 805 PSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQA 864
Query: 484 PEVY 487
+Y
Sbjct: 865 DMIY 868
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 208/442 (47%), Gaps = 71/442 (16%)
Query: 40 AYLVFTQIKKP-NLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY 98
A LVF I+ P ++ +WN ++ +++ + +F +L ++P TYPS+ KA
Sbjct: 249 AKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKAC 308
Query: 99 AQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAW 158
+ LG G +H V+K G D + ++ + MYA
Sbjct: 309 SGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYA------------------------ 344
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
KC +++ +LFD+M R+ SWN++IS Y ++ + ++ALELF EM+ K
Sbjct: 345 --------KCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFK 396
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
P T+ +++++CA+L + +G+ IH LV + F L+ V +A++DMY KCGC E A +V
Sbjct: 397 PDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEV 456
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
F + +K + WNSM+ G ++ G I+LF + ++P + ++L AC+ S +
Sbjct: 457 FEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNL 516
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS------------ 386
K + +++ I S ++D + G + AE + ++MP
Sbjct: 517 QLGKFIHGYIIRN-RVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISG 575
Query: 387 ----------------------DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE--LDKN 422
PDAI + S+L AC + +E K+ IIE L+ N
Sbjct: 576 YVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEIN 635
Query: 423 ESCGYVLMSNLYAASYQFEEAM 444
E L+ ++YA +EA+
Sbjct: 636 EVVMGALL-DMYAKCGAVDEAL 656
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK-GLSCWNSMVFGLA 298
G+ IH +V+ + N + ++I++Y C + A VF T+ ++ WN ++
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273
Query: 299 MNGYENEAIKLFSG-LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP- 356
N E +++F L LKPD ++ +VL AC+ G+V K M T+ IK
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGK-----MVHTHVIKSG 328
Query: 357 ---SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ S V + + E+A KL MP + D W +++S + G E A
Sbjct: 329 FAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMP-ERDVASWNNVISCYYQDGQPEKA 383
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/507 (34%), Positives = 289/507 (57%), Gaps = 18/507 (3%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
++L K HA ++ +G ++ + +L+ S G + A VF I P+ +WN II+G
Sbjct: 41 RNLAKTHAQIVVSGFSQKNYILNHLLSLYIS-FGSLGSAQKVFEDITAPSTTVWNQIIKG 99
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++S T + +I LF M + + ++ TY L A + L R+G Q+HGRV+ G
Sbjct: 100 HTRSKTSKKSIELFKRMTL-AGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWS 158
Query: 122 DQFIHNTIIYMYANCGF-----LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
+ ++ +I +YAN G L A +FDE+ + +VV WNS++ G + G+ D +R+
Sbjct: 159 NLYVRTNLINLYANGGDGGDFDLKRALYLFDEM-PDSNVVGWNSLLAGYVRRGDFDGARK 217
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M RN +W M++G+ +N + K AL LF +M+ ++ + +V+ L+ACA+LG
Sbjct: 218 VFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELGD 277
Query: 237 IRQGEWIHNFLVTNCFELNTIVVT----AIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
+ G+WIH ++ + V+ A+I MY CG + A ++F +P++ W+S
Sbjct: 278 LTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEEIPQRNTVSWSS 337
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSN---LKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
++ G A G EAI++F + S ++PD I+FI LTAC+H+G ++ F M
Sbjct: 338 IITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQSMH 397
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+T+ + P I+HY CMVD L RAGLL EA LI SMP P+ +WG+LLS CR H N E+
Sbjct: 398 KTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIV 457
Query: 410 KQAAKQI-IELD-KNESCGY-VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
AK + E+D N++ GY +L++N+YAA ++++ R M ++ ++K G S IE+
Sbjct: 458 SHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIEI 517
Query: 467 DGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+G + F+ G H +Y +L ++
Sbjct: 518 NGVLCSFMVGEETHKDVNLIYEMLGNI 544
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 296/500 (59%), Gaps = 9/500 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H+ +I+ G + ++ F + D+ A L+F I + +N +I +S+
Sbjct: 116 KQVHSLVIRYGFHSSVFCQNALINF-YAKINDLGSAELIFDGILVKDTIAYNCLISAYSR 174
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S A LF M S + ++ ++ YAQ G G + R+ + E ++
Sbjct: 175 SGEVLAARELFDKMRDRSIV-----SWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEI 229
Query: 125 IHNTIIYMYANCGFLS---EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
T++ + A G L + + D + +++ +M+ KCG +D+ R +FD M
Sbjct: 230 TLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHM 289
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ V+W++MI+GY +N + EALELF M+ IKP++ T+VS+L+ACA+LG++ GE
Sbjct: 290 ARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGE 349
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
I +++ + N V +A++ MY KCG +A Q+F+ +P++ WNSM+ GLA+NG
Sbjct: 350 RIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAING 409
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ +AI L++ ++ +KP+ I+F+ ++TAC H+G V ++F M + I P+I+H+
Sbjct: 410 FAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHF 469
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+C+VD R+G L +A + I M +P+ +IWG+LLSA R H N+E+A+ A K+++EL+
Sbjct: 470 ACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEP 529
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ S YV++SN+YA++ +++EA++ R LMK+ +++K S +EV+ VH+F+ G HP
Sbjct: 530 DNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHP 589
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
++ EVY ++ L LL +G
Sbjct: 590 RSDEVYSTIDGLALLSTWVG 609
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 214/409 (52%), Gaps = 9/409 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK+I A +I L+ P+ R+L A I YA VF QI P+ + + I
Sbjct: 15 INQLKQIQALIIIKYLSLTPLFIRRLL-----NASFIQYARQVFDQIPHPDQGVHCSFIT 69
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+S+ S A+ F+ M + ++ T P +FK+ A L G Q+H V++ G
Sbjct: 70 AYSRLSLNNEALRTFVSMH-QNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFH 128
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
F N +I YA L A L+FD + + D +A+N +I ++ GE+ +R LFDK
Sbjct: 129 SSVFCQNALINFYAKINDLGSAELIFDGILVK-DTIAYNCLISAYSRSGEVLAARELFDK 187
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VSWN+MIS Y +N + + +F+ MQ++ +P+E T+ ++L+ CAKLG + G
Sbjct: 188 MRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMG 247
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
I N IV TA+++MY KCG + VF+ + ++ + W++M+ G A N
Sbjct: 248 LRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQN 307
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G NEA++LF ++S+ +KP+ ++ ++VL+AC G V + + E+ + ++
Sbjct: 308 GRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSV-ETGERIGSYVESRGLISNVYV 366
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
S ++ + G + +A ++ +P D + W S++ +G E A
Sbjct: 367 ASALLGMYSKCGNIIKARQIFDKLPQ-RDNVTWNSMIMGLAINGFAEDA 414
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 285/495 (57%), Gaps = 36/495 (7%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+ HAH++K GL DP + +++ +S +G ++A +F + ++ W +I GF ++
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSS-SGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQF 124
+ A++ F++M T + +T S+ KA ++ R G +HG ++ G ++ D F
Sbjct: 183 GSASEAMVYFVEMKKTG-VAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I ++++ MY KC D+++++FD+M SR
Sbjct: 242 IGSSLVDMYG--------------------------------KCSCYDDAQKVFDEMPSR 269
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N V+W ++I+GYV++ F + + +F EM + ++ P+E T+ S+L+ACA +GA+ +G +H
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH 329
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+++ N E+NT T +ID+Y KCGC E A+ VF + +K + W +M+ G A +GY
Sbjct: 330 CYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYAR 389
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A LF + SS++ P+ ++F+AVL+AC H G V + + F M + ++P HY+CM
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD GR GLLEEA+ LI MP +P ++WG+L +C H + E+ K AA ++I+L + S
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHS 509
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP-KA 483
Y L++NLY+ S ++E R MK+ ++ K PG S IEV G++ EF+A P ++
Sbjct: 510 GRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLES 569
Query: 484 PEVYLLLNDLGLLIQ 498
++Y L+ +G+ ++
Sbjct: 570 DDLYKTLDTVGVQMR 584
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 263/442 (59%), Gaps = 6/442 (1%)
Query: 49 KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA 108
+PN+ WN I+ GF++S + A+++F M P ++T S+ + G
Sbjct: 214 EPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLG-FCPDQVTVSSVLPSVGDSENLNMGR 272
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
Q+HG V+KQGL D+ + + ++ MY G + +FDE + + N+ I GL++
Sbjct: 273 QIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEM-METGVCNAYITGLSRN 331
Query: 169 GEIDESRRLF----DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
G +D++ +F ++ + N VSW S+I+G +N K EALELFREMQ +KP+ T+
Sbjct: 332 GLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTI 391
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
S+L AC + A+ G H F V + V +A+IDMY KCG + + VFN +P
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPT 451
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
K L CWNS++ G +M+G E + +F L + LKPD+ISF ++L+AC G ++ Y
Sbjct: 452 KNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
F +M+E Y IKP ++HYSCMV+ LGRAG L+EA LI+ +P +PD+ +WG+LL++CR
Sbjct: 512 FNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQN 571
Query: 405 NIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
N+++A+ AA+++ L+ YVLMSN+YAA + E R M+ + ++K PGCS I
Sbjct: 572 NVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Query: 465 EVDGEVHEFVAGGRLHPKAPEV 486
+V +V+ +A + HP+ ++
Sbjct: 632 QVKNKVYTLLACDKSHPQIDQI 653
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 209/436 (47%), Gaps = 44/436 (10%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
HA ++K+G D +++++A S N A L+ I P ++ ++++I +++
Sbjct: 38 HARILKSGAQNDGYISAKLIA-SYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKL 96
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
+I +F M I P P+LFK A+L + G Q+H GL+ D F+
Sbjct: 97 FSQSIGVFSRMFSHGLI-PDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM----VS 183
++ +MY CG + +AR +FD + +E DVV ++++ G A+ G ++E R+ +M +
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRM-SEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIE 214
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N VSWN ++SG+ R+ KEA+ +F++M P + T+ S+L + + G I
Sbjct: 215 PNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQI 274
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKC-------------------------------GCP 272
H +++ + V++A++DMY K G
Sbjct: 275 HGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLV 334
Query: 273 ERALQVFNTVPKKGLS----CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
++AL++F ++ + W S++ G A NG + EA++LF +Q + +KP+ ++ ++
Sbjct: 335 DKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSM 394
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC + + + + + + S ++D + G ++ ++ + MP+
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLD-DVHVGSALIDMYAKCGRIKMSQIVFNMMPTK- 452
Query: 389 DAIIWGSLLSACRKHG 404
+ + W SL++ HG
Sbjct: 453 NLVCWNSLMNGYSMHG 468
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
Q H R++K G + D +I +I Y+N ++A L+ + + V +++S+I L K
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSI-PDPTVYSFSSLIYALTK 93
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
+S +F +M S + P + +L
Sbjct: 94 AKLFSQSIGVFSRMFSHGLI-------------------------------PDTHVLPNL 122
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
CA+L A + G+ IH + +++ V ++ MY +CG A +VF+ + +K +
Sbjct: 123 FKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDV 182
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
++++ G A G E +++ S ++ S ++P+ +S+ +L+ N SG +A F
Sbjct: 183 VTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQK 242
Query: 348 M 348
M
Sbjct: 243 M 243
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 284/497 (57%), Gaps = 35/497 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA G+A + A++++ +N A +F +I K NLF+WN +IRG++
Sbjct: 67 KQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLN-ARNLFDKIPKQNLFLWNVLIRGYAW 125
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ NAI+L+ ML ++P T P + KA + L +G +H V+K G E D F
Sbjct: 126 NGPHDNAIILYHKML-DYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLF 184
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ +I MYA KCG + ++ R+FDK+V R
Sbjct: 185 VGAALIDMYA--------------------------------KCGCVMDAGRVFDKIVVR 212
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V WNSM++ Y +N E++ L REM ++P+E T+V+++++ A + + G IH
Sbjct: 213 DAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIH 272
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
F + F+ N V TA+IDMY KCG + AL +F + +K + WN+++ G AM+G
Sbjct: 273 GFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAV 332
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A+ LF ++ + +PD+I+F+ VL AC+ +++ + + LM Y I P+++HY+CM
Sbjct: 333 GALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCM 391
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
+D LG G L+EA LIR+M PD+ +WG+LL++C+ HGN+E+A+ A +++IEL+ ++S
Sbjct: 392 IDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDS 451
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YV+++N+YA S ++E + R +M + +I+K CS IEV +V+ F+AG H +
Sbjct: 452 GNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSD 511
Query: 485 EVYLLLNDLGLLIQEMG 501
+Y L L L+ E G
Sbjct: 512 AIYAELKRLEGLMHEAG 528
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 146/328 (44%), Gaps = 45/328 (13%)
Query: 83 PIQPQ-RLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSE 141
P QP Y SL ++ G QLH + G+ ++Q + ++++YA L
Sbjct: 41 PPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLN 100
Query: 142 ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVK 201
AR +FD++ + ++ WN +I GY N
Sbjct: 101 ARNLFDKIPKQ-NLFLWNVLI-------------------------------RGYAWNGP 128
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTA 261
A+ L+ +M + ++P FT+ +L AC+ L AI +G IH +++ + +E + V A
Sbjct: 129 HDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAA 188
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
+IDMY KCGC A +VF+ + + WNSM+ A NG+ +E+I L + ++ ++P
Sbjct: 189 LIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPT 248
Query: 322 YISFIAVLT-----ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE 376
+ + V++ AC G+ + K+K + ++D + G ++
Sbjct: 249 EATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVK------TALIDMYAKCGSVKV 302
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHG 404
A L + + + W ++++ HG
Sbjct: 303 ALALFERL-REKRVVSWNAIITGYAMHG 329
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 266/458 (58%), Gaps = 10/458 (2%)
Query: 46 QIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL--GL 103
Q + W + I ++S+ A F DM + ++P +T+ +L G
Sbjct: 5 QSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAG-VEPTHITFIALLSGCGDFPSGS 63
Query: 104 ARDGAQLHGRVVKQGLEFDQFIHNT-IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
G LHG K GL+ + + T I+ MY+ G + +ARL+FD +D + + V WN+MI
Sbjct: 64 ETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDK-NSVTWNTMI 122
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G + G++ + +LFDKM + +SW +M++G+V+ +EAL FREMQ +KP
Sbjct: 123 DGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYV 182
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
+++ LNAC LGA+ G W+H ++++ F+ N V ++ID+YC+CGC E A +VF+ +
Sbjct: 183 AIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKM 242
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
K+ + WNS++ G A NG +E++ F +Q KP+ ++F LTAC+H G V++
Sbjct: 243 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGL 302
Query: 343 DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
+F M Y I P I+HY C+VD RAG LE+A K+++SMP P+ ++ GSLL+ACR
Sbjct: 303 RFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRN 362
Query: 403 HG-NIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGC 461
HG N +A++ K + +L+ YV++SN+YAA ++E A R MK + ++K+PG
Sbjct: 363 HGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRMRRKMKGLGLKKQPGF 422
Query: 462 SLIEVDGEVHEFVAGGRLHPKAPEVY----LLLNDLGL 495
S IE+D H F+AG H + + L+ +DLGL
Sbjct: 423 SSIEIDDCTHVFMAGDSAHVETAYIREVLELISSDLGL 460
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 127/311 (40%), Gaps = 65/311 (20%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL ++ + + S G + A LVF + N WNT+I G+ +S
Sbjct: 70 LHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMRSG 129
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
NA+ LF M + S ++P + +
Sbjct: 130 QVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIAALN 189
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A LG G +H V+ Q + + + N++I +Y CG + AR +FD+++ VV
Sbjct: 190 ACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKR-TVV 248
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G ES L FR+MQE+
Sbjct: 249 SWNSVIVGFAANGNAHES-------------------------------LVYFRKMQEEG 277
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCPER 274
KP+ T L AC+ +G + +G + + + ++ + ++D+Y + G E
Sbjct: 278 FKPNAVTFTGALTACSHVGLVDEGLRFFQSMKRD-YNISPRIEHYGCLVDLYSRAGRLED 336
Query: 275 ALQVFNTVPKK 285
AL+V ++P K
Sbjct: 337 ALKVVQSMPMK 347
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 117/261 (44%), Gaps = 36/261 (13%)
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL--GA 236
++ S VSW S I+ R+ EA + F +M+ ++P+ T ++LL+ C G+
Sbjct: 4 NQSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGS 63
Query: 237 IRQGEWIHNFLVTNCFELNTIVV-TAIIDMYCKCGCPER--------------------- 274
G+ +H + + N ++V TAI+ MY K G ++
Sbjct: 64 ETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMID 123
Query: 275 ----------ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
A+++F+ +P+ L W +MV G G+ EA+ F +Q S +KPDY++
Sbjct: 124 GYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVA 183
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
IA L AC + G ++ + + K +++ + ++D R G +E A ++ M
Sbjct: 184 IIAALNACTNLGALSLGL-WVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKM 242
Query: 385 PSDPDAIIWGSLLSACRKHGN 405
+ W S++ +GN
Sbjct: 243 EKRT-VVSWNSVIVGFAANGN 262
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 44/171 (25%)
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC---- 332
Q N + + W S + L + EA K F+ ++ + ++P +I+FIA+L+ C
Sbjct: 1 QKHNQSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFP 60
Query: 333 ---------------------NH-------------SGKVNQAKDYFTLMTETYKIKPSI 358
NH G+V +A+ F M + +
Sbjct: 61 SGSETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVT--- 117
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
++ M+D R+G + A KL MP +PD I W ++++ K G E A
Sbjct: 118 --WNTMIDGYMRSGQVHNAVKLFDKMP-EPDLISWTAMVNGFVKKGFHEEA 165
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 277/498 (55%), Gaps = 4/498 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA +I++ DP AS ++ + G A VF ++ N W +I G Q
Sbjct: 280 KQLHAKVIRSLPQIDPYVASALIEL-YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 338
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ LF M Q + + ++ L G QLH +K G
Sbjct: 339 YECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCL-GRQLHSLCLKSGHNRAIV 397
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I +YA CG L A +F + +E D+V+W SMI ++ G I ++R FD M +R
Sbjct: 398 VSNSLISLYAKCGDLQNAEFVFSSM-SERDIVSWTSMITAYSQIGNIIKAREFFDGMATR 456
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N ++WN+M+ Y+++ ++ L+++ M ++++ P T V+L CA +GA + G+ I
Sbjct: 457 NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQI 516
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
V LN V A I MY KCG A ++F+ + K + WN+M+ G + +G
Sbjct: 517 IGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMG 576
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+A K F + S KPDYIS++AVL+ C+HSG V + K YF +MT + I P ++H+SC
Sbjct: 577 KQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSC 636
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG L EA+ LI MP P A +WG+LLSAC+ HGN E+A+ AAK + ELD +
Sbjct: 637 MVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPD 696
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S Y+L++ +Y+ + + +++ + R LM++ I+K PG S +EV+ +VH F A HP+
Sbjct: 697 SGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQV 756
Query: 484 PEVYLLLNDLGLLIQEMG 501
+ +++L I +G
Sbjct: 757 IAIRNKMDELMEKIAHLG 774
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 199/417 (47%), Gaps = 18/417 (4%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H L+ GLA + +L S + L+ IK+PN+ N ++ G+++
Sbjct: 40 RALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAK 99
Query: 65 SSTPRNAILLFIDM----------LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
+ +A LF M L++ +P + + LG QL G
Sbjct: 100 QGSLSDAEELFDRMPRRDVASWNTLMSDTSRP-----AGSWMSCGALGCRELAPQLLGLF 154
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
K D + ++ M+ CG++ A +F +++ + NSM+ G AK ID +
Sbjct: 155 WKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERP-TIFCRNSMLAGYAKLYGIDHA 213
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
F+ M R+ VSWN MI+ ++ + +EAL L EM + ++ T S L ACA+L
Sbjct: 214 IEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARL 273
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
++ G+ +H ++ + +++ V +A+I++Y KCG + A +VFN++ + W ++
Sbjct: 274 FSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLI 333
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G +++++LF+ +++ + D + +++ C + + + +L ++
Sbjct: 334 GGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHN 393
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ + S ++ + G L+ AE + SM S+ D + W S+++A + GNI A++
Sbjct: 394 RAIVVSNS-LISLYAKCGDLQNAEFVFSSM-SERDIVSWTSMITAYSQIGNIIKARE 448
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 262/459 (57%), Gaps = 43/459 (9%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G I A +F +I ++ WN +I G++++ + A+ LF +M+ T+ ++P T S+
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN-VRPDESTMVSV 241
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A AQ G Q+H + G + I N +I +Y
Sbjct: 242 VSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYI-------------------- 281
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
KCGE++ + LF+ + ++ +SWN++I GY +KEAL LF+EM
Sbjct: 282 ------------KCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 329
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL------VTNCFELNTIVVTAIIDMYCK 268
P++ TM+S+L ACA LGAI G WIH ++ V N T ++IDMY K
Sbjct: 330 SGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRT----SLIDMYAK 385
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG E A QVF+++ + LS WN+M+FG AM+G N A +FS ++ + ++PD I+F+ +
Sbjct: 386 CGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGL 445
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC+HSG ++ + F M E YKI P ++HY CM+D LG +GL +EAE++I +M +P
Sbjct: 446 LSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEP 505
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D +IW SLL AC+ + N+E+ + A+ +I+++ YVL+SN+YA + ++ E + R
Sbjct: 506 DGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRA 565
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
L+ + ++K PGCS IE+D VHEF+ G + HP+ E+Y
Sbjct: 566 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 604
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 172/539 (31%), Positives = 290/539 (53%), Gaps = 49/539 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGD-INYAYLVFTQIKKPNLFIWNTI 58
++ L+ IHA +IKTGL A S+++ FC SP D + YA VF I++PNL IWNT+
Sbjct: 15 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTM 74
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG + SS P +A+ L++ M ++ + P T+P L K+ A+ R+G Q+HG V+K G
Sbjct: 75 FRGHALSSDPVSALYLYVCM-ISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLG 133
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ D ++H ++I MY G L +AR +FD+ + DVV++ ++I G A G I ++++F
Sbjct: 134 YDLDLYVHTSLISMYVQNGRLEDARKVFDQ-SSHRDVVSYTALITGYASKGYIASAQKMF 192
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D++ ++ VSWN+MISGY KEALELF+EM + N++P E TMVS+++ACA+ +I
Sbjct: 193 DEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIE 252
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G +H+++ + F N +V A+ID+Y KCG E A +F + K + WN+++ G
Sbjct: 253 LGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYT 312
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK-IKPS 357
EA+ LF + S P+ ++ +++L AC H G + + + + K + +
Sbjct: 313 HMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANA 372
Query: 358 IKHYSCMVDALGRAGLLEEAEKLI-----RSMPS-------------------------- 386
H + ++D + G +E A+++ RS+ S
Sbjct: 373 SSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRK 432
Query: 387 ---DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK--NESCGYVLMSNLYAASYQFE 441
+PD I + LLSAC G +++ + + + E K + Y M +L S F+
Sbjct: 433 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 492
Query: 442 EAMEERLLMKEVKIEKEPGCSLIE-----VDGEVHEFVAGG--RLHPKAPEVYLLLNDL 493
EA EE + E++ + CSL++ + E+ E A ++ PK P Y+LL+++
Sbjct: 493 EA-EEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNI 550
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 277/498 (55%), Gaps = 4/498 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA +I++ DP AS ++ + G A VF ++ N W +I G Q
Sbjct: 290 KQLHAKVIRSLPQIDPYVASALIEL-YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 348
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ LF M Q + + ++ L G QLH +K G
Sbjct: 349 YECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCL-GRQLHSLCLKSGHNRAIV 407
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I +YA CG L A +F + +E D+V+W SMI ++ G I ++R FD M +R
Sbjct: 408 VSNSLISLYAKCGDLQNAEFVFSSM-SERDIVSWTSMITAYSQIGNIIKAREFFDGMATR 466
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N ++WN+M+ Y+++ ++ L+++ M ++++ P T V+L CA +GA + G+ I
Sbjct: 467 NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQI 526
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
V LN V A I MY KCG A ++F+ + K + WN+M+ G + +G
Sbjct: 527 IGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMG 586
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+A K F + S KPDYIS++AVL+ C+HSG V + K YF +MT + I P ++H+SC
Sbjct: 587 KQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSC 646
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG L EA+ LI MP P A +WG+LLSAC+ HGN E+A+ AAK + ELD +
Sbjct: 647 MVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPD 706
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S Y+L++ +Y+ + + +++ + R LM++ I+K PG S +EV+ +VH F A HP+
Sbjct: 707 SGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQV 766
Query: 484 PEVYLLLNDLGLLIQEMG 501
+ +++L I +G
Sbjct: 767 IAIRNKMDELMEKIAHLG 784
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 199/401 (49%), Gaps = 3/401 (0%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRN 70
L++ + + + I+ + G ++ A +F ++ + ++ WNT++ G+ Q+ +
Sbjct: 61 LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLD 120
Query: 71 AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTII 130
+ F+ M + P T+ + K+ LG QL G K D + ++
Sbjct: 121 GLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALV 180
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
M+ CG++ A +F +++ + NSM+ G AK ID + F+ M R+ VSWN
Sbjct: 181 DMFVRCGYVDFASRLFSQIERP-TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWN 239
Query: 191 SMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN 250
MI+ ++ + +EAL L EM + ++ T S L ACA+L ++ G+ +H ++ +
Sbjct: 240 MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS 299
Query: 251 CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLF 310
+++ V +A+I++Y KCG + A +VFN++ + W ++ G +++++LF
Sbjct: 300 LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELF 359
Query: 311 SGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGR 370
+ +++ + D + +++ C + + + +L ++ + + S ++ +
Sbjct: 360 NQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS-LISLYAK 418
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
G L+ AE + SM S+ D + W S+++A + GNI A++
Sbjct: 419 CGDLQNAEFVFSSM-SERDIVSWTSMITAYSQIGNIIKARE 458
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 162/351 (46%), Gaps = 44/351 (12%)
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
LHGR+V GL F+ NT+++ Y +CG LS+AR + E +V+ N M+ G AK G
Sbjct: 26 LHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 85
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLL 228
+ ++ LFD+M R+ SWN+++SGY + +F + LE F M P+ FT ++
Sbjct: 86 SLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVM 145
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+C LG + F + V TA++DM+ +CG + A ++F+ + + +
Sbjct: 146 KSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIF 205
Query: 289 C-------------------------------WNSMVFGLAMNGYENEAIKLFSGLQSSN 317
C WN M+ L+ +G EA+ L +
Sbjct: 206 CRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG 265
Query: 318 LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLE 375
++ D ++ + LTAC + K L + + P I Y S +++ + G +
Sbjct: 266 VRLDSTTYTSSLTACARLFSLGWGKQ---LHAKVIRSLPQIDPYVASALIELYAKCGSFK 322
Query: 376 EAEKLIRSMPSDPDAIIW-----GSLLSACRKHGNIEMAKQAAKQIIELDK 421
EA+++ S+ D +++ W GSL C ++E+ Q +++ +D+
Sbjct: 323 EAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSK-SVELFNQMRAELMAIDQ 371
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/567 (33%), Positives = 301/567 (53%), Gaps = 74/567 (13%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+K+IHA LIK L +DP A +++A S +++ A VF Q+ PN+ ++N +IR +S
Sbjct: 38 IKQIHAQLIKCHLHQDPYIAPKLIA-SYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYS 96
Query: 64 QSSTPRNAILLFIDMLV--TSPIQPQRLTYPSLFK----AYAQLGLARDGAQLHGRVVKQ 117
S N++ F +L + TYP L K + + L L + +H V K
Sbjct: 97 LSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVK---MVHAHVEKL 153
Query: 118 GLEFDQFIHNTIIYMYANCGF-------------------------------LSEARLMF 146
G +D F+ N++I Y CG L A +F
Sbjct: 154 GFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVF 213
Query: 147 DEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNV------ 200
DE+ E D V+WN+M+ G K GE+D++ +LF++M R+ VSW++M+ GY +N
Sbjct: 214 DEM-PERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMAR 272
Query: 201 -------------------------KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+ KEA+ L EM++ ++ + +S+L ACA+ G
Sbjct: 273 MLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESG 332
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV-PKKGLSCWNSMV 294
+ G+ +H+ + + F +T V+ + IDMY KCGC + A +VFN + +K L WNSM+
Sbjct: 333 MLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMI 392
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G ++G+ ++I+LF+ + KPD +FI +L AC H+G VN+ + YF M Y I
Sbjct: 393 HGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGI 452
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P I+HY CMVD LGR G L+EA L+RSMP +P+AII G+LL ACR H ++++A +K
Sbjct: 453 VPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSK 512
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+ +L ++ + L+SN+YA S + + R M + +K G S IEV+ EVHEF
Sbjct: 513 YLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFT 572
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEMG 501
HPK+ ++Y +++ L ++++G
Sbjct: 573 VRDWSHPKSGDIYNMIDRLVHDLRQVG 599
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 82/200 (41%), Gaps = 7/200 (3%)
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
++ L+ C I+Q IH L+ + + +I Y A+ VFN VP
Sbjct: 26 ITDLHKCTNPNHIKQ---IHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPD 82
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGL---QSSNLKPDYISFIAVLTACNHSGKVNQA 341
+ +N ++ +++G E+ ++ F L + D ++ +L CN S
Sbjct: 83 PNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSL 142
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
E I + ++D R G +E A K+ M + D + W S++
Sbjct: 143 VKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGM-EERDVVSWNSMVGGLV 201
Query: 402 KHGNIEMAKQAAKQIIELDK 421
K+G+++ A + ++ E D+
Sbjct: 202 KNGDLDGALKVFDEMPERDR 221
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/495 (33%), Positives = 279/495 (56%), Gaps = 36/495 (7%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+ HAH++K G D + +++ S G + VF + ++ W +I GF ++
Sbjct: 124 QFHAHILKFGFDSDLFVRNSLIS-GYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRN 182
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQF 124
+ A+ F++M S + +T S+ KA + R G +HG ++ G + D F
Sbjct: 183 DSSLEAMTYFVEM-KRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVF 241
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I ++++ MY KCG D+++++FD+M SR
Sbjct: 242 IGSSLVDMYG--------------------------------KCGCYDDAQKVFDEMPSR 269
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N V+W ++I+GYV+ F++ + +F EM + ++ P+E T+ S+L+ACA +GA+ +G +H
Sbjct: 270 NVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH 329
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+++ N E+NT V T +ID Y KCGC E A+ VF + +K + W +M+ G A +GY
Sbjct: 330 CYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAI 389
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A+ LF + SS++ P+ ++FI VL+AC H G V + + F M E + ++P HY+CM
Sbjct: 390 GAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACM 449
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD GR GLLEEA+ LI MP +P +WG+L +C H + E+ K AA ++I+L + S
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHS 509
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP-KA 483
Y L++NLY+ S +++ R MK+ ++ K PGCS IEV G++HEF+A P ++
Sbjct: 510 GRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIEVKGKLHEFIAFDDKKPLES 569
Query: 484 PEVYLLLNDLGLLIQ 498
++Y L+++G+ ++
Sbjct: 570 DDLYKTLDNVGVQMR 584
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 123/295 (41%), Gaps = 38/295 (12%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH ++ G + + L G + A VF ++ N+ W +I G+ Q
Sbjct: 224 RSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ +F +ML S + P T S+ A A +G G ++H V+K +E +
Sbjct: 284 GRCFEKGMFVFEEML-KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTT 342
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ T+I YA CG L EA L+F+ + E +V W +MI G A
Sbjct: 343 VGTTLIDFYAKCGCLEEAILVFERL-REKNVYTWTAMINGFAA----------------- 384
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
GY A++LF M ++ P+E T + +L+ACA G + +G +
Sbjct: 385 ---------HGYAIG-----AVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRL- 429
Query: 245 NFL-VTNCFELNTIV--VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
FL + F L ++D++ + G E A + +P + + +FG
Sbjct: 430 -FLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFG 483
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 286/507 (56%), Gaps = 19/507 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HAH +K L P + ++ S G++ +A LVF + + + +I G+
Sbjct: 147 KQLHAHALKLALHLHPHVHTSLIHM-YSQVGELRHARLVFDKSTLRDAVSFTALITGYVS 205
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+A LF ++ + ++ ++ Y Q G + R+ + + +Q
Sbjct: 206 EGHVDDARRLFDEIPAKDVV-----SWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQ- 259
Query: 125 IHNTIIYMYANCGFLSEARL------MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+T++ + + CG L L + ++ N+++ +KCGEI +R+LF
Sbjct: 260 --STMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLF 317
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D M ++ + WN+MI GY ++EAL LF M +N+ P++ T +++L ACA LGA+
Sbjct: 318 DGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALD 377
Query: 239 QGEWIHNFLVTNCFEL----NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G+W+H ++ N N + T+II MY KCGC E A QVF ++ + L+ WN+M+
Sbjct: 378 LGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMI 437
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLAMNG+ A+ LF + + +PD I+F+ VL+AC +G V YF+ M + Y I
Sbjct: 438 SGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGI 497
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P ++HY CM+D L R+G +EA+ L+ +M +PD IWGSLL+ACR HG +E + A+
Sbjct: 498 SPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAE 557
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
++ EL+ S YVL+SN+YA + ++++ + R + + ++K PGC+ IE+DG VHEF+
Sbjct: 558 RLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFL 617
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G + HP++ ++ +L+++ L++E G
Sbjct: 618 VGDKFHPQSENIFRMLDEVDRLLEETG 644
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 295/549 (53%), Gaps = 66/549 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQI--KKPNLFIWNT 57
+ LK+IH+ +IK+GL A S+++ FC SP+ D++YA +F I + PN+FIWNT
Sbjct: 38 IPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNT 97
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IR S + TP +++ LF ML S + P T+PSLFK+ A+ + QLH +K
Sbjct: 98 LIRAHSLTPTPTSSLHLFSQML-HSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKL 156
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
L +H ++I+MY+ G L ARL+FD+ T D V++ ++I G G +D++RRL
Sbjct: 157 ALHLHPHVHTSLIHMYSQVGELRHARLVFDK-STLRDAVSFTALITGYVSEGHVDDARRL 215
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD++ +++ VSWN+MI+GYV++ +F+EAL F MQE ++ P++ TMVS+L+AC L ++
Sbjct: 216 FDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSL 275
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G+WI +++ F N +V A++DMY KCG A ++F+ + K + WN+M+ G
Sbjct: 276 ELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGY 335
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
EA+ LF + N+ P+ ++F+AVL AC G ++ K + + K +
Sbjct: 336 CHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGN 395
Query: 358 IKH---YSCMVDALGRAGLLEEAEKLIRSMPS---------------------------- 386
+ + ++ ++ + G +E AE++ RSM S
Sbjct: 396 VNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEE 455
Query: 387 ------DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG-------YVLMSNL 433
PD I + +LSAC + G +E+ + + N+ G Y M +L
Sbjct: 456 MINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSM-----NKDYGISPKLQHYGCMIDL 510
Query: 434 YAASYQFEEAMEERLLMKEVKIEKEPGC--SLI---EVDGEVH--EFVAGG--RLHPKAP 484
A S +F+EA ++LM +++E + SL+ + G+V E+VA L P+
Sbjct: 511 LARSGKFDEA---KVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENS 567
Query: 485 EVYLLLNDL 493
Y+LL+++
Sbjct: 568 GAYVLLSNI 576
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/495 (34%), Positives = 273/495 (55%), Gaps = 33/495 (6%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA +IK+ D R+++ D + A +F ++ +L WN+++ G S
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDED-AQRLFDEMPNRDLVSWNSLMSGLSGRG 219
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
+ F M S QP +T S+ A A +G +G LHG VVK G+ +
Sbjct: 220 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVV 279
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N++I MY GFL D + +LF++M R+
Sbjct: 280 NSLINMYGKLGFL--------------------------------DAASQLFEEMPVRSL 307
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSWNSM+ + N ++ ++LF M+ I P + TMV+LL AC G RQ E IH +
Sbjct: 308 VSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAY 367
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ F + I+ TA++++Y K G + +F + + W +M+ G A++ EA
Sbjct: 368 IHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREA 427
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
IKLF + ++ D+++F +L+AC+HSG V + K YF +M+E Y+++P + HYSCMVD
Sbjct: 428 IKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVD 487
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR+G LE+A +LI+SMP +P + +WG+LL ACR +GN+E+ K+ A+Q++ LD ++
Sbjct: 488 LLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRN 547
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
Y+++SN+Y+A+ + A + R LMKE ++ + PGCS IE ++H FV G +LHP++ E+
Sbjct: 548 YIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEI 607
Query: 487 YLLLNDLGLLIQEMG 501
+ L +L I E G
Sbjct: 608 HTKLEELIRKIXEAG 622
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
SL+ A + ++ IH ++ + + + ++ MY K G E A ++F+ +P +
Sbjct: 144 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNR 203
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDY 344
L WNS++ GL+ GY + F +++ S +P+ ++ ++V++AC G +++ K
Sbjct: 204 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSL 263
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
++ + + K + +++ G+ G L+ A +L MP + W S++ +G
Sbjct: 264 HGVVVK-LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVR-SLVSWNSMVVIHNHNG 321
Query: 405 NIE 407
E
Sbjct: 322 YAE 324
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 274/466 (58%), Gaps = 3/466 (0%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
I+ A +F + NL + N + + + + A L +++++ S I+P R++ S
Sbjct: 286 IDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEA-LGVLNLMMDSGIRPDRISMLSAIS 344
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
+ +QL G HG V++ G E I N +I MY C A +FD + + VV
Sbjct: 345 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK-TVV 403
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
WNS++ G + GE+D + F+ M +N VSWN++IS V+ ++EA+E+F MQ Q
Sbjct: 404 TWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQE 463
Query: 217 -IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
+ TM+S+ +AC LGA+ +WI+ ++ N +L+ + T ++DM+ +CG PE A
Sbjct: 464 CVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESA 523
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+ +FN++ + +S W + + +AM G AI+LF+ + LKPD + FI LTAC H
Sbjct: 524 MSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHG 583
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
G V Q K+ F M + + + P HY CMVD LGRAGLLEEA +LI+ MP++P+ +IW S
Sbjct: 584 GLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNS 643
Query: 396 LLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
LL+ACR GN+EMA AA++I L + YVL+SN+YA++ ++ + + RL MKE +
Sbjct: 644 LLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGL 703
Query: 456 EKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
K PG S+I++ G+ HEF +G HP+ ++ +L++L ++G
Sbjct: 704 RKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLG 749
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 226/453 (49%), Gaps = 50/453 (11%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAG--DINYAYLVFTQIKK-PNLFIWNT 57
+ +LK H L K GL D A ++++A +++A VF + F++N+
Sbjct: 44 IDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCFMYNS 103
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IRG++ S + AILLFI M+ S I P + T+P A+ +G Q+HG ++K
Sbjct: 104 LIRGYASSGLCKEAILLFIRMM-NSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKM 162
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
D F+ N++++ YA CG L AR +FDE+ +E +VV+W SMI G A RR
Sbjct: 163 DYAKDLFVQNSLVHFYAECGELDCARKVFDEM-SERNVVSWTSMICGYA--------RRE 213
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALEL-FREMQEQNIKPSEFTMVSLLNACAKLGA 236
F K+A++L FR ++++++ P+ TMV +++ACAKL
Sbjct: 214 F-----------------------AKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLED 250
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ GE +++F+ + E+N ++++A++DMY KC + A ++F+ L N+M
Sbjct: 251 LETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASN 310
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
G EA+ + + + S ++PD IS ++ +++C+ + K Y ++
Sbjct: 311 YVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKS-----CHGYVLRN 365
Query: 357 SIKHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+ + + ++D + + A ++ M S+ + W S+++ ++G ++ A +
Sbjct: 366 GFESWDNICNALIDMYMKCHRQDTAFRIFDRM-SNKTVVTWNSIVAGYIENGEVDAAWET 424
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+ E KN ++S L + +EEA+E
Sbjct: 425 FNTMPE--KNIVSWNTIISALVQEN-MYEEAIE 454
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 204/445 (45%), Gaps = 67/445 (15%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IH +IK AKD + ++ F + G+++ A VF ++ + N+ W ++I G+++
Sbjct: 154 QIHGLIIKMDYAKDLFVQNSLVHF-YAECGELDCARKVFDEMSERNVVSWTSMICGYARR 212
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
++A+ LF M+ + P +T + A A+L G +++ + G+E + +
Sbjct: 213 EFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLM 272
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ ++ MY KC ID ++RLFD+ + N
Sbjct: 273 ISALVDMYM--------------------------------KCNAIDIAKRLFDEYGASN 300
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
N+M S YVR KEAL + M + I+P +M+S +++C++L I G+ H
Sbjct: 301 LDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHG 360
Query: 246 FLVTNCFELNTIVVTAIIDMYCKC-------------------------------GCPER 274
+++ N FE + A+IDMY KC G +
Sbjct: 361 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDA 420
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN-LKPDYISFIAVLTACN 333
A + FNT+P+K + WN+++ L EAI++F +QS + D ++ +++ +AC
Sbjct: 421 AWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACG 480
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
H G ++ AK + E +I+ ++ + +VD R G E A + S+ ++ D W
Sbjct: 481 HLGALDLAK-WIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL-TNRDVSAW 538
Query: 394 GSLLSACRKHGNIEMAKQAAKQIIE 418
+ + A GN+E A + ++IE
Sbjct: 539 TAAIGAMAMAGNVERAIELFNEMIE 563
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 130/325 (40%), Gaps = 37/325 (11%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G+++ A+ F + + N+ WNTII Q + AI +F M + +T S+
Sbjct: 416 GEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSI 475
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A LG ++ + K ++ D + T++ M++ CG
Sbjct: 476 ASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCG----------------- 518
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+ + + +F+ + +R+ +W + I + A+ELF EM E
Sbjct: 519 ---------------DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIE 563
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT-NCFELNTIVVTAIIDMYCKCGCPE 273
Q +KP + L AC G ++QG+ I N + + + ++D+ + G E
Sbjct: 564 QGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLE 623
Query: 274 RALQVFNTVPKKGLSC-WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI-SFIAVLTA 331
ALQ+ +P + WNS++ + G N + F+ + L P+ S++ +
Sbjct: 624 EALQLIKDMPTEPNDVIWNSLLAACRVQG--NVEMAAFAAEKIQVLAPERTGSYVLLSNV 681
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKP 356
+G+ N M E KP
Sbjct: 682 YASAGRWNDMAKVRLSMKEKGLRKP 706
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 5/138 (3%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S GD A +F + ++ W I + + AI LF +M + ++P + +
Sbjct: 515 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEM-IEQGLKPDGVVF 573
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVK-QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
A GL + G ++ + K G+ + + ++ + G L EA + ++
Sbjct: 574 IGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMP 633
Query: 151 TEFDVVAWNSMIIGLAKC 168
TE + V WNS+ LA C
Sbjct: 634 TEPNDVIWNSL---LAAC 648
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 273/492 (55%), Gaps = 44/492 (8%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++HAH++ GL + S+++AF S +GDI+ + VF I
Sbjct: 91 QVHAHMLLRGLQPTALVGSKMVAFYAS-SGDIDSSVSVFNGIG----------------- 132
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
T+P + K+ +L G +HG +++ GL+FD ++
Sbjct: 133 ---------------------DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYV 171
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
++I +Y CG +++A +FD + T DV +WN+++ G K G ID + +F++M RN
Sbjct: 172 ATSLIILYGKCGEINDAGKVFDNM-TIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRN 230
Query: 186 TVSWNSMISGYVRNVKFKEALELFREM--QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
VSW +MISGY ++ ++AL LF EM ++ ++P+ T++S+L ACA+L + +G I
Sbjct: 231 IVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQI 290
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK--KGLSCWNSMVFGLAMNG 301
H N V+ A+ MY KCG A F+ + + K L WN+M+ A G
Sbjct: 291 HELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYG 350
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ +A+ F + + ++PD I+F +L+ C+HSG V+ YF M+ TY I P ++HY
Sbjct: 351 HGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHY 410
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+C+ D LGRAG L EA KL+ MP IWGSLL+ACRKH N+EMA+ AA+++ L+
Sbjct: 411 ACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEP 470
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+ YVL+SN+YA + +++E + R ++K +K PGCS IE++G+ H F+ G HP
Sbjct: 471 ENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHP 530
Query: 482 KAPEVYLLLNDL 493
+ E+Y+ L L
Sbjct: 531 QGKEIYMFLEAL 542
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 132/326 (40%), Gaps = 69/326 (21%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR---- 60
K +H +++ GL D A+ ++ G+IN A VF + ++ WN ++
Sbjct: 154 KCVHGLILRIGLQFDLYVATSLIIL-YGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTK 212
Query: 61 ---------------------------GFSQSSTPRNAILLFIDMLV-TSPIQPQRLTYP 92
G+SQS + A+ LF +M+ S ++P +T
Sbjct: 213 SGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIM 272
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD-T 151
S+ A AQL G Q+H + GL + + + MYA CG L +AR FD+++
Sbjct: 273 SVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRN 332
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
E +++AWN+MI A G +A+ FRE
Sbjct: 333 EKNLIAWNTMITAYASYGH-------------------------------GLQAVSTFRE 361
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKC 269
M + I+P + T LL+ C+ G + G N + T + +N V + D+ +
Sbjct: 362 MIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTT-YSINPRVEHYACVADLLGRA 420
Query: 270 GCPERALQVFNTVP-KKGLSCWNSMV 294
G A ++ +P G S W S++
Sbjct: 421 GRLAEASKLVGEMPMPAGPSIWGSLL 446
>gi|326518042|dbj|BAK07273.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/466 (35%), Positives = 280/466 (60%), Gaps = 7/466 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K HA +KTG D AS ++ T G + A VF ++ + + +WN ++R + +
Sbjct: 66 RKAHAATLKTGFRWDAYTASSLMDMYTM-LGRLEAARKVFDEMPQRAVVVWNMMLRCYVR 124
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE-FDQ 123
A+ L +M + P R+T + A ++ G G ++H + G+ F
Sbjct: 125 CGRNTEAVALAEEM-ERGRLTPDRVTLLTALTACSRAGDLSLGRKIHAYM--DGVTGFSL 181
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ N ++ MY G L EA +F+++ + +VV+W +++ G A G++D++R LF +
Sbjct: 182 PVANALLDMYVKNGCLEEAVNLFEKMPSR-NVVSWTTLVSGYAFAGQVDKARLLFHQCTE 240
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
++ + W +MI+ YV++ F EAL LFR+MQ I+P FT+V+LL CA LGA+ QG+ I
Sbjct: 241 KDLIMWTAMINAYVQHGCFIEALSLFRDMQMHQIEPDRFTVVTLLTCCANLGALDQGQLI 300
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H F +L+ ++ TA+IDMY KCG E++++VF + + W +++ GLA NG
Sbjct: 301 HQFAEGRNMKLDAVLGTALIDMYAKCGHVEKSVEVFERMEGRDTKAWTAIICGLATNGQA 360
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
A++LF ++ S KPD ++FI VL+AC H G V++ + F M E Y+I+P ++HYSC
Sbjct: 361 GRALELFEDMERSEAKPDSVTFIGVLSACCHGGLVDEGRKQFRAMKEVYRIRPRVEHYSC 420
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAI-IWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
+V+ LGRAG L+EAEKLI+S+P + DA+ ++G+L++AC+ GN++M+++ K+I +
Sbjct: 421 LVNLLGRAGQLDEAEKLIKSIPINKDAMPLFGALITACKAQGNVKMSERLTKRIGKQGYQ 480
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
+LMSN+YA + ++E+ + R M ++K GCSLIEV G
Sbjct: 481 IPDVNLLMSNVYATASRWEDVVRVRSKMAHPSVKKNAGCSLIEVKG 526
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 201/473 (42%), Gaps = 111/473 (23%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N +IR ++ S+ + + ++ D L + TYP + +A L ++ +G + H +
Sbjct: 15 NLLIRTLARRSSHADVMAVYYD-LRERGLVADSFTYPFVLRAIGALQISVEGRKAHAATL 73
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G +D + ++++ MY G L AR +FDE+ + VV WN M+ +CG
Sbjct: 74 KTGFRWDAYTASSLMDMYTMLGRLEAARKVFDEM-PQRAVVVWNMMLRCYVRCG------ 126
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
RNT EA+ L EM+ + P T+++ L AC++ G
Sbjct: 127 --------RNT-----------------EAVALAEEMERGRLTPDRVTLLTALTACSRAG 161
Query: 236 AIRQGEWIHNFL--VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ G IH ++ VT F L V A++DMY K GC E A+ +F +P + + W ++
Sbjct: 162 DLSLGRKIHAYMDGVTG-FSLP--VANALLDMYVKNGCLEEAVNLFEKMPSRNVVSWTTL 218
Query: 294 VFGLAMNGYEN-------------------------------EAIKLFSGLQSSNLKPDY 322
V G A G + EA+ LF +Q ++PD
Sbjct: 219 VSGYAFAGQVDKARLLFHQCTEKDLIMWTAMINAYVQHGCFIEALSLFRDMQMHQIEPDR 278
Query: 323 ISFIAVLTACNHSGKVNQAKDYF---------------TLMTETY----KIKPSIKHYS- 362
+ + +LT C + G ++Q + T + + Y ++ S++ +
Sbjct: 279 FTVVTLLTCCANLGALDQGQLIHQFAEGRNMKLDAVLGTALIDMYAKCGHVEKSVEVFER 338
Query: 363 -------------CMVDALGRAG-LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
C + G+AG LE E + RS + PD++ + +LSAC G ++
Sbjct: 339 MEGRDTKAWTAIICGLATNGQAGRALELFEDMERS-EAKPDSVTFIGVLSACCHGGLVDE 397
Query: 409 AK---QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
+ +A K++ + Y + NL + Q +EA + L+K + I K+
Sbjct: 398 GRKQFRAMKEVYRIRPRVE-HYSCLVNLLGRAGQLDEAEK---LIKSIPINKD 446
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 172/495 (34%), Positives = 266/495 (53%), Gaps = 37/495 (7%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H +K GL + A+ IL + G + A L+F ++ + WN II Q+
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDM-YAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQN 451
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ LF+ ML S ++P T+ S+ KA A G ++HGRV+K G+ D F+
Sbjct: 452 EHVEETLALFVSML-RSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFV 510
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ II MY CG L E + ++ +++ R
Sbjct: 511 GSAIIDMYCKCGMLVE--------------------------------AEKIHERLEERT 538
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
TVSWNS+ISG+ + + AL F M + + P FT ++L+ CA L + G+ IH
Sbjct: 539 TVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHG 598
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + + + I+DMY KCG + + +F PK+ W++M+ A +G +
Sbjct: 599 QILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGED 658
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AIKLF +Q N+KP++ FI+VL AC H G V++ YF M Y + P ++HYSCMV
Sbjct: 659 AIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMV 718
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGR+G + EA +LI SMP + D +IW +LL CR GN+E+A++AA +++LD +S
Sbjct: 719 DLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSS 778
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL+SN+YA + + E + R MK K++KEPGCS I+V EVH F+ G + HP++ E
Sbjct: 779 AYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEE 838
Query: 486 VYLLLNDLGLLIQEM 500
+Y LL+ EM
Sbjct: 839 IY---QQTHLLVDEM 850
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 197/416 (47%), Gaps = 31/416 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+ HA + TG ++ +L F ++NYA+ VF ++ + ++ WNT+I G++
Sbjct: 58 KQAHAQITVTGFVPTVFVSNCLLQF-YCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAG 116
Query: 65 SSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
A LF M P+R +++ S+ Y Q G R ++ ++ ++ D
Sbjct: 117 VGNMEFAQFLFDSM-------PERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHD 169
Query: 123 QFIHNTIIYMYANC------GFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
+ T + C G + + ++ + DVV +++ + C ++D +
Sbjct: 170 ---YATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFN 226
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F +M RN+V W+++I+GYVRN +F E L+L++ M ++ + S+ T S +CA L A
Sbjct: 227 IFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSA 286
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
G +H + + F + IV TA +DMY KC A +VFNT P N+++ G
Sbjct: 287 FELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVG 346
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT-LMTETYKIK 355
A EA+++F LQ S L D IS LTAC + K Y + +K
Sbjct: 347 YARQDQVLEALEIFRSLQKSYLDFDEISLSGALTAC------SAIKGYLEGIQLHGLAVK 400
Query: 356 PSIKHYSC----MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ C ++D + G L EA + M DA+ W ++++A ++ ++E
Sbjct: 401 CGLDFNICVANTILDMYAKCGALMEACLIFDDMEI-KDAVSWNAIIAAHEQNEHVE 455
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 139/271 (51%), Gaps = 7/271 (2%)
Query: 63 SQSSTPRNAILLFIDMLVTSPIQP-QRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
SQ++ P I + ++ + P ++LT+ +F+ + L G Q H ++ G
Sbjct: 17 SQTTPPYA-----IHSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVP 71
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
F+ N ++ Y C L+ A +FD++ + DV++WN+MI G A G ++ ++ LFD M
Sbjct: 72 TVFVSNCLLQFYCKCLNLNYAFNVFDKM-PQRDVISWNTMIFGYAGVGNMEFAQFLFDSM 130
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ VSWNSM+S Y++N ++++E+F +M+ I+ T +L AC + G
Sbjct: 131 PERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGL 190
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H + F+ + + TA++DMY C + A +F +P++ CW++++ G N
Sbjct: 191 QVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRND 250
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
E +KL+ + + +F + +C
Sbjct: 251 RFTEGLKLYKVMLDEGMGVSQATFASAFRSC 281
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 191/468 (40%), Gaps = 81/468 (17%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H I+ G D + + ++ S +++A+ +F ++ + N W+ +I G+ ++
Sbjct: 191 QVHCLAIQMGFDSDVVTGTALVDM-YSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRN 249
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ L+ ML + + T+ S F++ A L G QLH +K +D +
Sbjct: 250 DRFTEGLKLYKVML-DEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIV 308
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ MYA KC + ++R++F+ +
Sbjct: 309 GTATLDMYA--------------------------------KCDRMVDARKVFNTFPNPT 336
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
S N++I GY R + EALE+FR +Q+ + E ++ L AC+ + +G +H
Sbjct: 337 RQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHG 396
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
V + N V I+DMY KCG A +F+ + K WN+++ N + E
Sbjct: 397 LAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEE 456
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SC 363
+ LF + S ++PD +F +V+ AC +N + + K + + S
Sbjct: 457 TLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGME---VHGRVIKSGMGLDWFVGSA 513
Query: 364 MVDALGRAGLLEEAEK---------------LIRSMPSD-------------------PD 389
++D + G+L EAEK +I S+ PD
Sbjct: 514 IIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPD 573
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
+ ++L C +E+ KQ QI++L L S++Y AS
Sbjct: 574 NFTYATVLDICANLATVELGKQIHGQILKLQ--------LHSDVYIAS 613
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 31/144 (21%)
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
+ T + C+ L AI G+ H + F V ++ YCKC A VF+
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 281 TVPKKGLSCWNSMVFGLA-------------------------------MNGYENEAIKL 309
+P++ + WN+M+FG A NG+ ++I++
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157
Query: 310 FSGLQSSNLKPDYISFIAVLTACN 333
F+ ++ ++ DY +F VL AC
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACT 181
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/498 (34%), Positives = 277/498 (55%), Gaps = 4/498 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA +I++ DP AS ++ + G A VF ++ N W +I G Q
Sbjct: 290 KQLHAKVIRSLPQIDPYVASALIEL-YAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQ 348
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ LF M Q + + ++ L G QLH +K G
Sbjct: 349 YECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCL-GRQLHSLCLKSGHNRAIV 407
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I +YA CG L A +F + +E D+V+W SMI ++ G I ++R FD M +R
Sbjct: 408 VSNSLISLYAKCGDLQNAEFVFSSM-SERDIVSWTSMITAYSQIGNIIKAREFFDGMDTR 466
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N ++WN+M+ Y+++ ++ L+++ M ++++ P T V+L CA +GA + G+ I
Sbjct: 467 NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQI 526
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
V LN V A I MY KCG A ++F+ + K + WN+M+ G + +G
Sbjct: 527 IGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMG 586
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+A K F + S KPDYIS++AVL+ C+HSG V + K YF +MT + I P ++H+SC
Sbjct: 587 KQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSC 646
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG L EA+ LI MP P A +WG+LLSAC+ HGN E+A+ AAK + ELD +
Sbjct: 647 MVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPD 706
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S Y+L++ +Y+ + + +++ + R LM++ I+K PG S +EV+ +VH F A HP+
Sbjct: 707 SGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQV 766
Query: 484 PEVYLLLNDLGLLIQEMG 501
+ L++L I +G
Sbjct: 767 IAIRNKLDELMEKIAHLG 784
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 199/401 (49%), Gaps = 3/401 (0%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRN 70
L++ + + + I+ + G ++ A +F ++ + ++ WNT++ G+ Q+ +
Sbjct: 61 LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLD 120
Query: 71 AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTII 130
+ F+ M + P T+ + K+ LG QL G K D + ++
Sbjct: 121 GLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALV 180
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
M+ CG++ A +F +++ + NSM+ G AK ID + F+ M R+ VSWN
Sbjct: 181 DMFVRCGYVDFASRLFSQIERP-TIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWN 239
Query: 191 SMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN 250
MI+ ++ + +EAL L EM + ++ T S L ACA+L ++ G+ +H ++ +
Sbjct: 240 MMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS 299
Query: 251 CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLF 310
+++ V +A+I++Y KCG + A +VFN++ + W ++ G +++++LF
Sbjct: 300 LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELF 359
Query: 311 SGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGR 370
+ +++ + D + +++ C + + + +L ++ + + S ++ +
Sbjct: 360 NQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS-LISLYAK 418
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
G L+ AE + SM S+ D + W S+++A + GNI A++
Sbjct: 419 CGDLQNAEFVFSSM-SERDIVSWTSMITAYSQIGNIIKARE 458
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 162/351 (46%), Gaps = 44/351 (12%)
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
LHGR+V GL F+ NT+++ Y +CG LS+AR + E +V+ N M+ G AK G
Sbjct: 26 LHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 85
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLL 228
+ ++ LFD+M R+ SWN+++SGY + +F + LE F M P+ FT ++
Sbjct: 86 SLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVM 145
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+C LG + F + V TA++DM+ +CG + A ++F+ + + +
Sbjct: 146 KSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIF 205
Query: 289 C-------------------------------WNSMVFGLAMNGYENEAIKLFSGLQSSN 317
C WN M+ L+ +G EA+ L +
Sbjct: 206 CRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG 265
Query: 318 LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLE 375
++ D ++ + LTAC + K L + + P I Y S +++ + G +
Sbjct: 266 VRLDSTTYTSSLTACARLFSLGWGKQ---LHAKVIRSLPQIDPYVASALIELYAKCGSFK 322
Query: 376 EAEKLIRSMPSDPDAIIW-----GSLLSACRKHGNIEMAKQAAKQIIELDK 421
EA+++ S+ D +++ W GSL C ++E+ Q +++ +D+
Sbjct: 323 EAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSK-SVELFNQMRAELMAIDQ 371
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 279/491 (56%), Gaps = 33/491 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M++ K+ HA ++K GL D AS ++A C S G ++YA +F Q+ + F +NT++
Sbjct: 44 MEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDELGSFQFNTMM 103
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG + A++ + +M ++P TYP+L KA A+L +G Q+H ++K GL
Sbjct: 104 RGHVKDMNTEEALITYKEM-AERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHILKLGL 162
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D F+ N++I MY CG + +F++++ E V +W+++I A G + RL
Sbjct: 163 ENDVFVQNSLISMYGKCGEIGVCCAVFEQMN-ERSVASWSALITAHASLGMWSDCLRLLG 221
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M + GY R E +VS+L+AC LGA+
Sbjct: 222 DMSNE----------GYWR--------------------AEESILVSVLSACTHLGALDL 251
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G +H FL+ N LN IV T++I+MY KCG + + +F + KK ++ M+ GLAM
Sbjct: 252 GRSVHGFLLRNVSGLNVIVETSLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAM 311
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+GY E +++F+ + L+PD I ++ VL AC+H+G V + F M + I+P+I+
Sbjct: 312 HGYGREGLRIFTEMLEQGLEPDDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQ 371
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD +GRAG ++EA +LI+SMP +P+ ++W SLLSA + H N++ + AAKQ+ +L
Sbjct: 372 HYGCMVDLMGRAGKIDEALELIKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKL 431
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D ++ YV++SN+YA + ++E+ + R M + + PG SL+EV ++H FV+
Sbjct: 432 DSQKASDYVVLSNMYAQAQRWEDVAKTRTNMFSKGLSQRPGFSLVEVKRKMHRFVSQDAG 491
Query: 480 HPKAPEVYLLL 490
HP++ VY +L
Sbjct: 492 HPQSESVYEML 502
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/502 (34%), Positives = 273/502 (54%), Gaps = 37/502 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+ D +KIHAHL + A D + S I +C G + A+ VF +++ ++ W ++I
Sbjct: 67 LDDARKIHAHLASSRFAGDAFLDNSLIHLYCK--CGSVVEAHKVFDKMRNKDMVSWTSLI 124
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G++Q+ P AI L ML +P T+ SL KA + G Q+H VK
Sbjct: 125 AGYAQNDMPAEAIGLLPGML-KGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDW 183
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D ++ + ++ MYA +CG++D + +FD
Sbjct: 184 HEDVYVGSALLDMYA--------------------------------RCGKMDMATAVFD 211
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
K+ S+N VSWN++ISG+ R + AL +F EMQ + + FT S+ +A A +GA+ Q
Sbjct: 212 KLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQ 271
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+W+H ++ + +L V ++DMY K G A +VF V K L WNSM+ A
Sbjct: 272 GKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQ 331
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
G EA+ F ++ S + + ISF+ +LTAC+H G V + K YF ++ E Y ++P I+
Sbjct: 332 YGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIE 390
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY +VD LGRAGLL A I MP +P A +WG+LL+ACR H N ++ + AA + +L
Sbjct: 391 HYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQL 450
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D ++S VL+ N+YA++ ++ A R +MK ++KEP CS +E++ VH FVA
Sbjct: 451 DPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDT 510
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+A E+Y + +++ + I++ G
Sbjct: 511 HPRAEEIYKMWDEISMKIRKEG 532
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 156/347 (44%), Gaps = 37/347 (10%)
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
+D L + + P Y + A AQ D ++H + D F+ N++I++Y
Sbjct: 39 LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCK 98
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
CG + EA +FD++ + D+V+W S+I+G
Sbjct: 99 CGSVVEAHKVFDKMRNK-DMVSW-------------------------------TSLIAG 126
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN 255
Y +N EA+ L M + KP+ FT SLL A G IH V + +
Sbjct: 127 YAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHED 186
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
V +A++DMY +CG + A VF+ + K WN+++ G A G A+ +F+ +Q
Sbjct: 187 VYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQR 246
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLE 375
+ + + ++ ++ +A G + Q K M ++ + K + + M+D ++G +
Sbjct: 247 NGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKS-RQKLTAFVGNTMLDMYAKSGSMI 305
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
+A K+ + + D + W S+L+A ++G + K+A E+ K+
Sbjct: 306 DARKVFERV-LNKDLVTWNSMLTAFAQYG---LGKEAVSHFEEMRKS 348
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/480 (34%), Positives = 278/480 (57%), Gaps = 12/480 (2%)
Query: 24 SRILAFCTSPAGDINYAYLVFTQIK----KPNLFIWNTIIRGFSQSSTPRNAILLFIDML 79
+ I+ +C S GD++ A +F + + L WN+II G+ ++ A +F +ML
Sbjct: 368 TMIVGYCES--GDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNML 425
Query: 80 VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFL 139
+ I+P T S+ A A R G ++H + + +GL+ D F+ ++ MY+ C L
Sbjct: 426 MEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDL 485
Query: 140 SEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR----NTVSWNSMISG 195
+ A++ FDEV E DV WN++I G + +I+ + L +KM N +WNS+++G
Sbjct: 486 TAAQVAFDEV-MEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAG 544
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN 255
V N + ++LF EMQ ++P +T+ +L AC++L + +G+ H + ++ +
Sbjct: 545 LVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTD 604
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
+ A++DMY KCG + A ++ + L N+M+ AM+G+ E I LF + +
Sbjct: 605 VHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLA 664
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLE 375
PD+++F++VL++C H G V ++F LM Y +KP++KHY+ MVD L R+G L
Sbjct: 665 LGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLMG-YYNVKPTLKHYTSMVDLLSRSGQLH 723
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYA 435
EA +LI+ MP + D+++WG+LL C HGNIE+ + AA+++IEL+ N S YVL++NL+A
Sbjct: 724 EAYELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHA 783
Query: 436 ASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGL 495
+ ++ + R +MK+ + K PGCS IE E+H F+A R H +A E+Y L+ L L
Sbjct: 784 YARRWTDLARVRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYLAL 843
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 209/426 (49%), Gaps = 15/426 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HAH IKTG D +++L + G + A +F + NL W I+ +
Sbjct: 79 KQVHAHTIKTGFDADGFIDTKLLQM-YARCGLLKDADFLFETMPMRNLHSWKAILSVYLD 137
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A LLF +L ++ +P +FKA + LG G QLHG V+K + +
Sbjct: 138 HGLFEEAFLLF-QVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIY 196
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS- 183
+ N +I MY CG L +A+ + ++ E D V WNS+I A G + E+ +KM S
Sbjct: 197 VSNALIDMYGKCGSLDDAKKVLVKM-PERDSVTWNSVITACAANGMVYEALEFLEKMKSL 255
Query: 184 ----RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
N VSW+++I G+ +N +EA+E+ MQ + + P+ T+ +L ACA+L +
Sbjct: 256 DYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDL 315
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ +H ++ + F N +VV A++D+Y +CG A ++F K + N+M+ G
Sbjct: 316 GKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCE 375
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G ++A +LF + ++ IS+ ++++ + ++A F M I+P
Sbjct: 376 SGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSF 435
Query: 360 HYSCMVDALG-----RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
++ A R G A+ +++ + S D + G+L+ K ++ A+ A
Sbjct: 436 TLGSVLTACADTISLRQGKEIHAQAIVKGLQS--DTFVGGALVEMYSKCQDLTAAQVAFD 493
Query: 415 QIIELD 420
+++E D
Sbjct: 494 EVMEKD 499
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 162/386 (41%), Gaps = 75/386 (19%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G Q+H +K G + D FI ++ MYA CG L +A
Sbjct: 78 GKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADF---------------------- 115
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
LF+ M RN SW +++S Y+ + F+EA LF+ +Q ++ F
Sbjct: 116 ----------LFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPL 165
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
+ AC+ LG++ G +H ++ F LN V A+IDMY KCG + A +V +P++
Sbjct: 166 VFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERD 225
Query: 287 LSCWNS---------MVF---------------------------GLAMNGYENEAIKLF 310
WNS MV+ G A NGY+ EAI++
Sbjct: 226 SVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEML 285
Query: 311 SGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGR 370
+Q L P+ + VL AC +++ K +T I + + +VD R
Sbjct: 286 FRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVV-VNALVDVYRR 344
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ--AAKQIIELDKNESCGYV 428
G + A K+ S + + +++ + G++ AK+ ++ +++
Sbjct: 345 CGDMGGAAKIFLKF-SVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNS 403
Query: 429 LMSNLYAASYQFEEA--MEERLLMKE 452
++S Y ++ F+EA M + +LM+E
Sbjct: 404 IISG-YVRNFMFDEAFSMFQNMLMEE 428
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 7/212 (3%)
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
F + + + S++ V C KLG + +H + F+ + + T ++ MY +
Sbjct: 52 FSLLDNKPLNTSKYASVLDSCKCPKLG-----KQVHAHTIKTGFDADGFIDTKLLQMYAR 106
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG + A +F T+P + L W +++ +G EA LF LQ ++ D+ F V
Sbjct: 107 CGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLV 166
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
AC+ G V + L+ + ++ +I + ++D G+ G L++A+K++ MP +
Sbjct: 167 FKACSGLGSVELGRQLHGLVIK-FRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMP-ER 224
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
D++ W S+++AC +G + A + +++ LD
Sbjct: 225 DSVTWNSVITACAANGMVYEALEFLEKMKSLD 256
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/502 (34%), Positives = 281/502 (55%), Gaps = 37/502 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K K++HA + G D + A++++ +C + ++ A L+F +I K N+F+WN +I
Sbjct: 91 IKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDS--LSSARLLFDRIPKHNIFLWNVLI 148
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG++ + A+ L+ M + P T+P + KA A L G ++H VV+ G
Sbjct: 149 RGYAWNGPYEAAVQLYYQMFDYGLV-PDNFTFPFVLKACAALSAIEHGREIHEHVVQTGW 207
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D F+ +I MYA KCG + +R +FD
Sbjct: 208 EKDVFVGAALIDMYA--------------------------------KCGCVGSAREVFD 235
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
K++ R+ V WNSM++ Y +N L L EM ++P+E T+V+ ++A A A+ Q
Sbjct: 236 KILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQ 295
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G +H FE + V TA++DMY KCG A +F + K + WN+M+ G AM
Sbjct: 296 GRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAM 355
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G+ EA+ LF + KPD+I+F+ VL+AC+H G + + +F M YKI P+++
Sbjct: 356 HGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQ 414
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY+CMVD LG +G L+EA LI M PD+ +WG+LL++C+ H N+E+ + A +++IEL
Sbjct: 415 HYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIEL 474
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ +++ YV++SN+YA + ++E + R LM + +++K CS IEV +VH F++G
Sbjct: 475 EPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTS 534
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP + E+Y L +G L++E G
Sbjct: 535 HPLSDEIYSELERVGGLMKEAG 556
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 152/346 (43%), Gaps = 36/346 (10%)
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR 143
+ P Y SL ++ + G QLH +V G FD I ++ +Y C LS AR
Sbjct: 71 LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130
Query: 144 LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
L+FD + + ++ WN +I GY N ++
Sbjct: 131 LLFDRI-PKHNIFLWN-------------------------------VLIRGYAWNGPYE 158
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
A++L+ +M + + P FT +L ACA L AI G IH +V +E + V A+I
Sbjct: 159 AAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALI 218
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY KCGC A +VF+ + + WNSM+ + NG+ + + L S + + L+P
Sbjct: 219 DMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEA 278
Query: 324 SFIAVLTACNHSGKVNQAKDYFTL-MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
+ + ++A + + Q ++ L + ++ +K + +VD + G + A L
Sbjct: 279 TLVTAISASADNAALPQGRELHGLSWRQEFESHDKVK--TALVDMYAKCGSVRVARNLFE 336
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYV 428
+ + W ++++ HG+ A +++ + K + +V
Sbjct: 337 RL-GVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFV 381
>gi|125554650|gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
Length = 602
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 144/349 (41%), Positives = 232/349 (66%)
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
DVV+W +M+ GL + G +D++R +FD M +RN VSWNSMISGYV+ +F +ALE+F EM
Sbjct: 162 LDVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEM 221
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+ ++ + F S L AC GA+ +G I+ ++ + E++ + TA++DMYCKCGC
Sbjct: 222 RALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKCGCV 281
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
+ A +VF+++P +GL+ WN M+ G A++G ++A++LF ++++ + PD ++ + VLTAC
Sbjct: 282 DEAWRVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTAC 341
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H+G+V++ + Y + + I+P +HY CMVD GRAG L+EA+K+I MP DPD +
Sbjct: 342 AHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAV 401
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
G+LL AC+ HG++++ + ++I+LD + S YVL++NL A + +++E + R LM E
Sbjct: 402 LGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMDE 461
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ KE G S+IEVDGE EF G HP+A E+Y + D+ I+ G
Sbjct: 462 RNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEG 510
>gi|357132191|ref|XP_003567715.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Brachypodium distachyon]
Length = 656
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/431 (35%), Positives = 256/431 (59%), Gaps = 3/431 (0%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
AG I+ A +F +I + ++ W +I G+ ++ A+ ++ M+ +
Sbjct: 223 AGAIDMAAEMFERIPERDVVSWLVMIDGYIRADCISEALRTYVAMMAEVDTRGNVALLVD 282
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
KA A+ +G QLH ++K G + F+ T+I+ Y +C L A++ F D
Sbjct: 283 FQKACARHAAVLEGQQLHTVILKDGFDTHLFVQATLIHFYGSCDLLDLAKMQFKLSDKSH 342
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+ +WN+ + G+ + + E+R+LFD M ++T+SW++++SGYV++ AL+LF M
Sbjct: 343 -IASWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSGYVQSGHSDMALQLFCLML 401
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+KP+ T+ S L+A A G + QG WIH+++++ L ++ +IDMY KCG
Sbjct: 402 GAGVKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSIHLTDNLIAGLIDMYAKCGSVA 461
Query: 274 RALQVFNTVPKK--GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A+ +FN V +K LS WN+M+ LA++G+ + +++LFS LQSSN+KP+ I++I VL A
Sbjct: 462 DAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFSQLQSSNIKPNSITYIGVLNA 521
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H+G V + K +F M Y I P+IKHY CMVD LGRAG LEEAE+LI++MP D +
Sbjct: 522 CCHAGMVTEGKHHFESMRREYGIPPTIKHYGCMVDLLGRAGYLEEAERLIKTMPVKSDVV 581
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IWGS+L+A R HGN+ + ++AA+++ +LD N V + N+YA + ++ R ++
Sbjct: 582 IWGSILAAARSHGNVALGEKAAEELAKLDPNHGASKVALCNIYADAGRWNNVSVVRKELR 641
Query: 452 EVKIEKEPGCS 462
+E+ G S
Sbjct: 642 YENLERLSGSS 652
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 206/442 (46%), Gaps = 52/442 (11%)
Query: 16 LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLF 75
LA AA L + G +++A + ++ + + + T++ +++ +A+ +F
Sbjct: 73 LALRDAAAHNTLLAALARGGHLDHAKRMLAEMPQRDTVSFTTVLTALARAGHAEDAMAVF 132
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA-----QLHGRVVKQGLEFDQFIHNTII 130
ML + P +T + A LARD A +HG V++GL+ + ++
Sbjct: 133 RGMLAQD-VPPNEVTLAGVITA-----LARDWAPAPLGMVHGVSVQRGLDGFVIVATNLV 186
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
+ YA + AR +F+ + + + V WN+M+ G K G ID + +F+++ R+ VSW
Sbjct: 187 HAYAAAAQVGFARAVFEWMPDK-NTVTWNAMLNGYVKAGAIDMAAEMFERIPERDVVSWL 245
Query: 191 SMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
MI GY+R EAL + M E + + + +V ACA+ A+ +G+ +H ++
Sbjct: 246 VMIDGYIRADCISEALRTYVAMMAEVDTRGNVALLVDFQKACARHAAVLEGQQLHTVILK 305
Query: 250 NCFELNTIVVTAIIDMYCKCGCPE-------------------------------RALQV 278
+ F+ + V +I Y C + A Q+
Sbjct: 306 DGFDTHLFVQATLIHFYGSCDLLDLAKMQFKLSDKSHIASWNAFMAGIVRKNLMHEARQL 365
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
F+ +P+K W++++ G +G+ + A++LF + + +KP++I+ + L+A +SG +
Sbjct: 366 FDNMPEKDTISWSTLLSGYVQSGHSDMALQLFCLMLGAGVKPNHITLASTLSAVANSGTL 425
Query: 339 NQAK---DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII-WG 394
Q + DY +++++ + ++ + ++D + G + +A L + ++ W
Sbjct: 426 EQGRWIHDY--IISKSIHLTDNL--IAGLIDMYAKCGSVADAVLLFNHVKEKLSSLSPWN 481
Query: 395 SLLSACRKHGNIEMAKQAAKQI 416
+++ + HG+ M+ + Q+
Sbjct: 482 AMICSLAIHGHAHMSLELFSQL 503
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 122/253 (48%), Gaps = 10/253 (3%)
Query: 105 RDGAQLHGRVVKQGLEFDQ-FIHNTIIYMYA---NCGFLSEARLMFDEVDTEF-DVVAWN 159
R G QLH K GL F+ N+++ Y+ + + A +FDE+ D A N
Sbjct: 23 RHGEQLHALAAKSGLLVSNLFVRNSLLAFYSRLPSSHAPALAHHLFDEIPLALRDAAAHN 82
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
+++ LA+ G +D ++R+ +M R+TVS+ ++++ R ++A+ +FR M Q++ P
Sbjct: 83 TLLAALARGGHLDHAKRMLAEMPQRDTVSFTTVLTALARAGHAEDAMAVFRGMLAQDVPP 142
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
+E T+ ++ A A+ A +H V + IV T ++ Y A VF
Sbjct: 143 NEVTLAGVITALARDWAPAPLGMVHGVSVQRGLDGFVIVATNLVHAYAAAAQVGFARAVF 202
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+P K WN+M+ G G + A ++F + + D +S++ ++ + ++
Sbjct: 203 EWMPDKNTVTWNAMLNGYVKAGAIDMAAEMFERIP----ERDVVSWLVMIDGYIRADCIS 258
Query: 340 QA-KDYFTLMTET 351
+A + Y +M E
Sbjct: 259 EALRTYVAMMAEV 271
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 87/199 (43%), Gaps = 28/199 (14%)
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
+ G + A ++ +P++ + +++ LA G+ +A+ +F G+ + ++ P+ ++
Sbjct: 89 ARGGHLDHAKRMLAEMPQRDTVSFTTVLTALARAGHAEDAMAVFRGMLAQDVPPNEVTLA 148
Query: 327 AVLTACN-----------HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLE 375
V+TA H V + D F ++ +V A A +
Sbjct: 149 GVITALARDWAPAPLGMVHGVSVQRGLDGFVIVATN------------LVHAYAAAAQVG 196
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYA 435
A + MP D + + W ++L+ K G I+MA + ++I E D +++M + Y
Sbjct: 197 FARAVFEWMP-DKNTVTWNAMLNGYVKAGAIDMAAEMFERIPERD---VVSWLVMIDGYI 252
Query: 436 ASYQFEEAMEERL-LMKEV 453
+ EA+ + +M EV
Sbjct: 253 RADCISEALRTYVAMMAEV 271
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 268/461 (58%), Gaps = 3/461 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD++ A V + N W T+I Q A+ L+ ML +P + S+
Sbjct: 327 GDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADG-CRPNISCFSSV 385
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A A L R G ++H +K G + F+ +++I MY C + A+ +F+ + E +
Sbjct: 386 LSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSL-PEKN 444
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V WNS+I G + G++ E+ LF+KM +RN+VSWN+MISGY N +F +AL F M
Sbjct: 445 TVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLA 504
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
P E T+ S+L ACA L ++ G +H +V E N + TA+ DMY K G +
Sbjct: 505 SGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDS 564
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
+ +VF +P+K W +MV GLA NG+ E+I LF + + + P+ +F+A+L AC+H
Sbjct: 565 SRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSH 624
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
G V QA YF M + + I P KHY+CMVD L RAG L EAE+L+ + S+ D W
Sbjct: 625 CGLVEQAIHYFETM-QAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWS 683
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
SLLSAC + N E+ ++AAK++ EL+K+ + GYVL+SN+YA+ ++++A E R+LM+
Sbjct: 684 SLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGAS 743
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGL 495
++K+ GCS +++ G+ H F + HP + E+Y +L+ L L
Sbjct: 744 LKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIYEILDLLML 784
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 186/387 (48%), Gaps = 42/387 (10%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A ++ + ++ + +I GF ++ ++A +F ML S ++P +T +
Sbjct: 194 GSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCS-VRPNVVTLICV 252
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFI--HNTIIYMYANCGFLSEARLMFDEVDTE 152
KA G + G VK L F++ I HN++I +Y G + AR +FD+++
Sbjct: 253 IKACVGAGEFDLAMGVVGLAVKCNL-FEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVR 311
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
DVV+W +++ A G++D +RR+ D M +RN VSW ++I+ + + EAL+L+ +M
Sbjct: 312 -DVVSWTALLDVYADLGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQM 370
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+P+ S+L+ACA L +R G IH + N V +++IDMYCKC
Sbjct: 371 LADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQC 430
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
A +VFN++P+K CWNS++ G + NG EA LF+ + + N +S+ +++
Sbjct: 431 TYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARN----SVSWNTMISGY 486
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+ + A +YF M + I P I
Sbjct: 487 AENRRFGDALNYFYAMLASGHI---------------------------------PGEIT 513
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIEL 419
S+L AC ++EM + +I++L
Sbjct: 514 LSSVLLACANLCSLEMGRMVHAEIVKL 540
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 164/403 (40%), Gaps = 74/403 (18%)
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE--VDTEFDVVAWNSMIIGLA 166
LH ++ GL D+ + + ++ YA + F + ++ M+
Sbjct: 101 SLHAHALRSGLATDRSVASNLLTAYAAFARAGDRDQAFRDCVAADAASSFTYDFMVSEHV 160
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNS-------------------------------MISG 195
K G+I +RRLF M ++ VS+ + MISG
Sbjct: 161 KAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISG 220
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA----------------IRQ 239
+VRN K+A +FR+M +++P+ T++ ++ AC G +
Sbjct: 221 FVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEK 280
Query: 240 GEWIHNFLVT---------------NCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVP 283
+HN L+T + E+ +V TA++D+Y G + A +V + +P
Sbjct: 281 SIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLDAMP 340
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
+ W +++ G EA+KL+S + + +P+ F +VL+AC + +
Sbjct: 341 ARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSAC---ATLQDLRG 397
Query: 344 YFTLMTETYKIKPSIKHY--SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
+ K+ S + S ++D + A+++ S+P + + + W SL+S
Sbjct: 398 GTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLP-EKNTVCWNSLISGYS 456
Query: 402 KHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
+G + +A ++ S + M + YA + +F +A+
Sbjct: 457 WNGKM---VEAEGLFNKMPARNSVSWNTMISGYAENRRFGDAL 496
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 102/217 (47%), Gaps = 5/217 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +HA ++K G+ +D I L + +GD++ + VF Q+ + N W +++G ++
Sbjct: 531 RMVHAEIVKLGI-EDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAE 589
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ +I LF DM + + I P T+ ++ A + GL + G+
Sbjct: 590 NGFAEESISLFEDM-IENGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIPPKSK 648
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA--KCGEIDE-SRRLFDKM 181
+ ++ + A G L EA + +V +E D +W+S++ + + EI E + + ++
Sbjct: 649 HYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHEL 708
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
NT + + + Y K+K+A E MQ ++K
Sbjct: 709 EKDNTAGYVLLSNMYASCGKWKDAAETRILMQGASLK 745
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/484 (34%), Positives = 263/484 (54%), Gaps = 32/484 (6%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFID 77
KD + L + G + YA VF + N W+ ++ GF A LF D
Sbjct: 265 KDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKD 324
Query: 78 MLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCG 137
ML + S +A A L G QLH + K GL D N+++ MYA
Sbjct: 325 MLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYA--- 381
Query: 138 FLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYV 197
K G ID++ LFD+MV ++TVS+++++SGYV
Sbjct: 382 -----------------------------KAGLIDQATTLFDQMVVKDTVSYSALVSGYV 412
Query: 198 RNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTI 257
+N K EA +FR+MQ N++P TMVSL+ AC+ L A++ G+ H ++ T
Sbjct: 413 QNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETS 472
Query: 258 VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN 317
+ A+IDMY KCG + + Q+F+ +P + + WN+M+ G ++G EA LF ++
Sbjct: 473 ICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQA 532
Query: 318 LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEA 377
+PD ++FI +++AC+HSG V + K +F +M Y I P ++HY MVD L R G L+EA
Sbjct: 533 CEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEA 592
Query: 378 EKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
+ I+ MP D +WG+LL ACR H NI++ KQ + I +L + +VL+SN+++A+
Sbjct: 593 YQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAA 652
Query: 438 YQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLI 497
+F+EA E R++ KE +K PGCS IE++G +H F+ G R H ++ E+Y L+++ + I
Sbjct: 653 GRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDI 712
Query: 498 QEMG 501
++G
Sbjct: 713 NKLG 716
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 195/427 (45%), Gaps = 40/427 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ + +H H + GL D + S L + +A VF ++ ++ WN ++
Sbjct: 145 LRSARAVHCHAARAGLHAD-LFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLA 203
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G++ + I +L+ P T +L AQ G G +H V+
Sbjct: 204 GYALHGKYSDTIACL--LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVR---- 257
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
A + D D V+ +++ AKCG + + R+F+
Sbjct: 258 ---------------------ACSLHDHKD---GVLVGTALLDMYAKCGHLVYASRVFEA 293
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLLNACAKLGAIRQ 239
M RN V+W++++ G+V + EA LF++M Q + S ++ S L ACA L +
Sbjct: 294 MAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCL 353
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ +H L + + +++ MY K G ++A +F+ + K ++++V G
Sbjct: 354 GKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQ 413
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK-DYFTLMTETYKIKPSI 358
NG +EA ++F +Q+ N++PD + ++++ AC+H + K + +++ + SI
Sbjct: 414 NGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSI 473
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ ++D + G ++ + ++ MP+ D + W ++++ HG + K+A ++
Sbjct: 474 --CNALIDMYAKCGRIDLSRQIFDVMPAR-DIVSWNTMIAGYGIHG---LGKEATALFLD 527
Query: 419 LDKNESC 425
+ K+++C
Sbjct: 528 M-KHQAC 533
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 164/382 (42%), Gaps = 45/382 (11%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD++ A +F QI P + +N +IR +S L P QP T+P +
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLP-QPNNYTFPFV 135
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
KA + L R +H + GL D F+ ++ +YA C A +F + D
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR-D 194
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
VVAWN +M++GY + K+ + + MQ+
Sbjct: 195 VVAWN-------------------------------AMLAGYALHGKYSDTIACLLLMQD 223
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC----FELNTIVVTAIIDMYCKCG 270
+ P+ T+V+LL A+ GA+ QG +H + V C + +V TA++DMY KCG
Sbjct: 224 DH-APNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCG 282
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN---LKPDYISFIA 327
A +VF + + W+++V G + G EA LF + + L P S +
Sbjct: 283 HLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSP--TSVAS 340
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
L AC + + K L+ ++ + + + ++ +AGL+++A L M
Sbjct: 341 ALRACANLSDLCLGKQLHALLAKS-GLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVK 399
Query: 388 PDAIIWGSLLSACRKHGNIEMA 409
D + + +L+S ++G + A
Sbjct: 400 -DTVSYSALVSGYVQNGKADEA 420
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 103/235 (43%), Gaps = 5/235 (2%)
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
CG++ +R LFD++ + +N++I Y + + +P+ +T +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
L AC+ L +R +H + V TA++D+Y KC A VF +P + +
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK---DY 344
WN+M+ G A++G ++ I +Q + P+ + +A+L G ++Q + Y
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDH-APNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ K + + ++D + G L A ++ +M + + W +L+
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVR-NEVTWSALVGG 308
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 6/217 (2%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H +I G+A + + ++ + G I+ + +F + ++ WNT+I G+
Sbjct: 459 HGSVIVRGIASETSICNALIDM-YAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGL 517
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQ-LHGRVVKQGLEFDQFIH 126
+ A LF+DM +P +T+ L A + GL +G + H K G+ +
Sbjct: 518 GKEATALFLDM-KHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHY 576
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR---LFDKMVS 183
++ + A GFL EA + + DV W +++ ID ++ + ++
Sbjct: 577 IGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGP 636
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS 220
T ++ + + + +F EA E+ +EQ K S
Sbjct: 637 EGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKS 673
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/470 (35%), Positives = 269/470 (57%), Gaps = 45/470 (9%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVT---SPIQPQRLTYPSLFKAYA 99
+ I PN F WN +I+ +S+S+ + +L ++T + + P + TYP + KA A
Sbjct: 37 ILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACA 96
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
L +G Q+H V+K G E D +I N++I+ YA+
Sbjct: 97 YLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYAS------------------------ 132
Query: 160 SMIIGLAKCGEIDESRRLFDKMVS-RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
CG ++ +R++FD+M RN VSWN MI Y + + L +F EM + +
Sbjct: 133 --------CGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKV-YE 183
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFE---LNTIVVTAIIDMYCKCGCPERA 275
P +TM S++ AC LG++ G W+H F++ C + + +V T ++DMYCKCG E A
Sbjct: 184 PDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIA 243
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNH 334
QVF + + +S WNS++ G A++G A+ F + + + P+ I+F+ VL+ACNH
Sbjct: 244 KQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNH 303
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
SG V++ YF +MT+ Y ++PS+ HY C+VD RAG ++EA ++ MP PDA+IW
Sbjct: 304 SGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWR 363
Query: 395 SLLSAC-RKHGNIEMAKQAAKQIIELDKNESCG--YVLMSNLYAASYQFEEAMEERLLMK 451
SLL AC ++H ++E++++ AKQI E CG YVL+S +YA++ ++ + R LM
Sbjct: 364 SLLDACYKQHASVELSEEMAKQIFE-SNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMN 422
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ + K+PGCSLIE++G HEF AG HP++ ++Y +N++ ++ +G
Sbjct: 423 DKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDIYKFMNEIQEKLESVG 472
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 42/297 (14%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQI-KKPNLFIWNTIIRGFS 63
K++HAH++K G D + ++ F S G + A VF ++ + N+ WN +I ++
Sbjct: 105 KQVHAHVLKLGFELDTYICNSLIHFYAS-CGYLETARKVFDRMCEWRNVVSWNVMIDSYA 163
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK---QGLE 120
+ +++F +M+ +P T S+ +A LG G +H V+K + +
Sbjct: 164 KVGDYDIVLIMFCEMM--KVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVV 221
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ ++ MY CG L A+ +F+ + DV +WNS+I+G A G
Sbjct: 222 CDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYR-DVSSWNSIILGFAVHG----------- 269
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELF-REMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
K K AL+ F R ++ + I P+ T V +L+AC G + +
Sbjct: 270 --------------------KAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDE 309
Query: 240 GEWIHNFLVTNC-FELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMV 294
G + E + + ++D+Y + G + AL V + +P K W S++
Sbjct: 310 GLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLL 366
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/497 (36%), Positives = 286/497 (57%), Gaps = 36/497 (7%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H ++IK GL D + S L S G + A VF ++ +L WN+II + Q+
Sbjct: 270 VHLYVIKHGLESD-VFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQND 328
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QGLEFDQFI 125
P A+ F +ML ++P LT SL + QL R G +HG VV+ + LE D I
Sbjct: 329 DPVTALGFFKEMLFVG-MRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVI 387
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
N ++ MY AK G ID +R +F+++ SR+
Sbjct: 388 GNALVNMY--------------------------------AKLGSIDCARAVFEQLPSRD 415
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+SWN++I+GY +N EA++ + M+E + I P++ T VS+L A + +GA++QG IH
Sbjct: 416 VISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIH 475
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
L+ NC L+ V T +IDMY KCG E A+ +F +P++ WN+++ L ++G+
Sbjct: 476 GRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGE 535
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A++LF +++ +K D+I+F+++L+AC+HSG V++A+ F M + Y+IKP++KHY CM
Sbjct: 536 KALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCM 595
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD GRAG LE+A L+ +MP DA IWG+LL+ACR HGN E+ A+ +++E+D
Sbjct: 596 VDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENV 655
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+SN+YA ++E A++ R L ++ + K PG S + V V F AG + HP+
Sbjct: 656 GYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCA 715
Query: 485 EVYLLLNDLGLLIQEMG 501
E+Y L L ++ +G
Sbjct: 716 EIYEELRVLNAKMKSLG 732
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 232/485 (47%), Gaps = 81/485 (16%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA L+ G A+D + ++++ + GD++ + F I++ N+F WN+++ + +
Sbjct: 68 KQLHALLLVLGKAQDVVLLTQLVTLYAT-LGDLSLSSTTFKHIQRKNIFSWNSMVSAYVR 126
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
R+++ ++L S ++P T+P + KA L DG ++H V+K G E D +
Sbjct: 127 RGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLA---DGEKMHCWVLKMGFEHDVY 183
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM--- 181
+ ++I++Y+ G + A +F ++ DV +WN+MI G + G + E+ R+ D+M
Sbjct: 184 VAASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMISGFCQNGNVAEALRVLDRMKTE 242
Query: 182 -VSRNTVSWNSM-----------------------------------ISGYVRNVKFKEA 205
V +TV+ +SM I+ Y + + ++A
Sbjct: 243 EVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDA 302
Query: 206 LELFREMQ--------------EQN-----------------IKPSEFTMVSLLNACAKL 234
+F M+ EQN ++P T+VSL + +L
Sbjct: 303 QRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQL 362
Query: 235 GAIRQGEWIHNFLV-TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
R G +H F+V E++ ++ A+++MY K G + A VF +P + + WN++
Sbjct: 363 SDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTL 422
Query: 294 VFGLAMNGYENEAIKLFSGLQSS-NLKPDYISFIAVLTACNHSGKVNQA-KDYFTLMTET 351
+ G A NG +EAI ++ ++ + P+ +++++L A +H G + Q K + L+
Sbjct: 423 ITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNC 482
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ + +C++D G+ G LE+A L +P + ++ W +++S+ HG+ E A Q
Sbjct: 483 LFLDVFVA--TCLIDMYGKCGRLEDAMSLFYEIPQET-SVPWNAIISSLGIHGHGEKALQ 539
Query: 412 AAKQI 416
K +
Sbjct: 540 LFKDM 544
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 136/299 (45%), Gaps = 34/299 (11%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H +++ + I L + G I+ A VF Q+ ++ WNT+I G++Q
Sbjct: 369 RAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQ 428
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ AI + M I P + T+ S+ AY+ +G + G ++HGR++K L D F
Sbjct: 429 NGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVF 488
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ +I MY CG L +A +F E+ E V WN++I L G
Sbjct: 489 VATCLIDMYGKCGRLEDAMSLFYEIPQETS-VPWNAIISSLGIHGH-------------- 533
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
++AL+LF++M+ +K T VSLL+AC+ G + + +W
Sbjct: 534 -----------------GEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCF 576
Query: 245 NFLVTNC-FELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
+ + + N ++D++ + G E+A + + +P + S W +++ ++G
Sbjct: 577 DTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHG 635
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
+F +V +C + +Q +H L+ + +++T ++ +Y G + F
Sbjct: 53 DFNLV--FRSCTNINVAKQ---LHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFK 107
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVN 339
+ +K + WNSMV G +++ + L S S ++PD+ +F VL AC
Sbjct: 108 HIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGE 167
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ + M + + + + ++ R G +E A K+ MP D W +++S
Sbjct: 168 KMHCWVLKMGFEHDVYVA----ASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMISG 222
Query: 400 CRKHGNIEMA 409
++GN+ A
Sbjct: 223 FCQNGNVAEA 232
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 253/446 (56%), Gaps = 33/446 (7%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N++IR + + N++ +F M S I P T+P++ KA AQL G +HG V+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFS-ILPDSSTFPAVLKATAQLCDTGVGKMIHGIVI 116
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
+ G D + ++++Y C +S+A
Sbjct: 117 QMGFICDVYTSTALVHLYCTCLSISDAS-------------------------------- 144
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+LFD+M RN V+WN++I+GY N KF +A++ FR M +PSE T+V +L+AC+ LG
Sbjct: 145 QLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLG 204
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A QG+WIH F+ N LN V TA+IDMY KCG +VF + +K + WN ++
Sbjct: 205 AFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLIS 264
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
G AMNG + A++ FS + N KPD ++F+ VL AC H G V + + F M + + ++
Sbjct: 265 GYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQ 324
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P I+HY CMVD LGRAGLLEEA +LI+SM +PD IIW +LL ACR HGN ++ + K+
Sbjct: 325 PRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKR 384
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+IEL+ N YVL+SN+Y+ ++ E + R +M I K PGCS IE++ V+EFVA
Sbjct: 385 LIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMNLRGIRKVPGCSSIEINNVVYEFVA 444
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQEMG 501
P+ +Y L++L ++E G
Sbjct: 445 SNDRKPEFEAIYKQLDNLIKKLKENG 470
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 118/243 (48%), Gaps = 3/243 (1%)
Query: 176 RLFDKMV-SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R+F K S N+ NSMI Y+ K +L +F M + +I P T ++L A A+L
Sbjct: 43 RIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQL 102
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G+ IH ++ F + TA++ +YC C A Q+F+ +P++ WN+++
Sbjct: 103 CDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALI 162
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G N +AI F G+ + +P + + VL+AC+H G NQ K + ++
Sbjct: 163 TGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHN-RL 221
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+ ++ + ++D + G + E EK+ + + + W L+S +G + A QA
Sbjct: 222 RLNVFVGTALIDMYAKCGAVYEVEKVFEEI-REKNVYTWNVLISGYAMNGQGDAALQAFS 280
Query: 415 QII 417
+++
Sbjct: 281 RML 283
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 253/446 (56%), Gaps = 33/446 (7%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N++IR + + N++ +F M S I P T+P++ KA AQL G +HG V+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFS-ILPDSSTFPAVLKATAQLCDTGVGKMIHGIVI 116
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
+ G D + ++++Y C +S+A
Sbjct: 117 QMGFICDVYTSTALVHLYCTCLSISDAS-------------------------------- 144
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+LFD+M RN V+WN++I+GY N KF +A++ FR M +PSE T+V +L+AC+ LG
Sbjct: 145 QLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLG 204
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A QG+WIH F+ N LN V TA+IDMY KCG +VF + +K + WN ++
Sbjct: 205 AFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLIS 264
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
G AMNG + A++ FS + N KPD ++F+ VL AC H G V + + F M + + ++
Sbjct: 265 GYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQ 324
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P I+HY CMVD LGRAGLLEEA +LI+SM +PD IIW +LL ACR HGN ++ + K+
Sbjct: 325 PRIEHYGCMVDLLGRAGLLEEALELIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKR 384
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+IEL+ N YVL+SN+Y+ ++ E + R +M I K PGCS IE++ V+EFVA
Sbjct: 385 LIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMMSLRGIRKVPGCSSIEINNVVYEFVA 444
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQEMG 501
P+ +Y L++L ++E G
Sbjct: 445 SNDRKPEFEAIYKQLDNLIKKLKENG 470
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 118/243 (48%), Gaps = 3/243 (1%)
Query: 176 RLFDKMV-SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R+F K S N+ NSMI Y+ K +L +F M + +I P T ++L A A+L
Sbjct: 43 RIFSKYRGSINSQQCNSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQL 102
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G+ IH ++ F + TA++ +YC C A Q+F+ +P++ WN+++
Sbjct: 103 CDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALI 162
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G N +AI F G+ + +P + + VL+AC+H G NQ K + ++
Sbjct: 163 TGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHN-RL 221
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+ ++ + ++D + G + E EK+ + + + W L+S +G + A QA
Sbjct: 222 RLNVFVGTALIDMYAKCGAVYEVEKVFEEI-REKNVYTWNVLISGYAMNGQGDAALQAFS 280
Query: 415 QII 417
+++
Sbjct: 281 RML 283
>gi|115467246|ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza sativa Japonica Group]
gi|125596589|gb|EAZ36369.1| hypothetical protein OsJ_20697 [Oryza sativa Japonica Group]
Length = 602
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 144/349 (41%), Positives = 231/349 (66%)
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
DVV+W +M+ GL + G +D++R +FD M +RN VSWNSMISGYV+ +F +ALE+F EM
Sbjct: 162 LDVVSWTTMVGGLCRLGLVDDAREVFDAMPARNLVSWNSMISGYVKADRFLDALEVFDEM 221
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+ ++ + F S L AC GA+ +G I+ ++ + E++ + TA++DMYCKCGC
Sbjct: 222 RALGVEGNGFVATSALVACTGAGALGRGREIYRWVEQSGIEVDAKLATAVVDMYCKCGCV 281
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
+ A VF+++P +GL+ WN M+ G A++G ++A++LF ++++ + PD ++ + VLTAC
Sbjct: 282 DEAWGVFDSLPARGLTTWNCMIGGFAVHGRCDDALELFHQMEAAGVAPDDVTLLNVLTAC 341
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H+G+V++ + Y + + I+P +HY CMVD GRAG L+EA+K+I MP DPD +
Sbjct: 342 AHAGEVSEGRRYLNHIVSRHGIEPKGEHYGCMVDLFGRAGQLDEAKKVIDEMPMDPDLAV 401
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
G+LL AC+ HG++++ + ++I+LD + S YVL++NL A + +++E + R LM E
Sbjct: 402 LGALLGACKIHGDVDLGEAIGWRVIDLDPDNSGRYVLLANLLAGAGRWDEVGKVRRLMDE 461
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ KE G S+IEVDGE EF G HP+A E+Y + D+ I+ G
Sbjct: 462 RNVSKEAGRSVIEVDGEACEFRCGNLRHPQAREIYAMAVDMVSRIRAEG 510
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 177/498 (35%), Positives = 277/498 (55%), Gaps = 4/498 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA +I+ DP AS ++ + G A VF + N W +I GF Q
Sbjct: 290 KQLHAQVIRNLPCIDPYVASALVEL-YAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQ 348
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ LF M Q + +++ L G QLH +K G
Sbjct: 349 HGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL-GRQLHSLCLKSGQIQAVV 407
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I MYA C L A +F ++ E D+V+W SMI ++ G I ++R FD M ++
Sbjct: 408 VSNSLISMYAKCDNLQSAESIFRFMN-EKDIVSWTSMITAHSQVGNIAKAREFFDGMSTK 466
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N ++WN+M+ Y+++ ++ L ++ M E++++P T V+L CA LGA + G+ I
Sbjct: 467 NVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQI 526
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
V L+T V A+I MY KCG A +VF+ + K + WN+M+ G + +G
Sbjct: 527 IGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMG 586
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+AI++F + KPDYIS++AVL+ C+HSG V + K YF +M + I P ++H+SC
Sbjct: 587 KQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSC 646
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG L EA+ LI MP P A +WG+LLSAC+ HGN E+A+ AAK + ELD +
Sbjct: 647 MVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPD 706
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S Y+LM+ +YA + + +++ + R LM++ I+K PG S +EV+ +VH F A HP+
Sbjct: 707 SGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQV 766
Query: 484 PEVYLLLNDLGLLIQEMG 501
+ L++L I +G
Sbjct: 767 IAIRKKLDELMEKIARLG 784
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 193/377 (51%), Gaps = 3/377 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A +F ++ ++ WNT++ G+ QS ++ F+ M + P T+
Sbjct: 85 GRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYA 144
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
K+ LG QL G V K G + D + ++ M+ CG + A +F + E
Sbjct: 145 MKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRI-KEPT 203
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+ NSM++G K +D + LFD M R+ VSWN M+S ++ + +EAL++ +MQ
Sbjct: 204 IFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS 263
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+ ++ T S L ACA+L ++R G+ +H ++ N ++ V +A++++Y KCGC +
Sbjct: 264 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKE 323
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VFN++ + W ++ G +G E+++LF+ +++ + D + +++ C
Sbjct: 324 AKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCS 383
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+ + +L ++ +I+ + S ++ + L+ AE + R M ++ D + W
Sbjct: 384 RMDLCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAESIFRFM-NEKDIVSWT 441
Query: 395 SLLSACRKHGNIEMAKQ 411
S+++A + GNI A++
Sbjct: 442 SMITAHSQVGNIAKARE 458
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 165/349 (47%), Gaps = 42/349 (12%)
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
HGR+V GL F+ NT+++ Y +CG L +AR + +V+ N M+ G K G
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLN 229
+ ++ LF +M +R+ SWN+++SGY ++ ++ +LE F M + P+ FT +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMK 146
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC------------------ 271
+C LG + + + ++ V A++DM+ +CG
Sbjct: 147 SCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFC 206
Query: 272 -------------PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
+ AL++F+++P++ + WN MV L+ +G EA+ + +QS +
Sbjct: 207 RNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLEE 376
+ D ++ + LTAC + K L + + P I Y S +V+ + G +E
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQ---LHAQVIRNLPCIDPYVASALVELYAKCGCFKE 323
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHG----NIEMAKQAAKQIIELDK 421
A+ + S+ D + + W L++ +HG ++E+ Q +++ LD+
Sbjct: 324 AKGVFNSL-HDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQ 371
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 255/428 (59%), Gaps = 6/428 (1%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
W + I S++ A F M + ++P +T +L A G LHG
Sbjct: 32 WTSRITLLSRNGRLAEAAKEFTAMRLAG-VEPNHITLIALLSGCADCEPF--GDSLHGYA 88
Query: 115 VKQGLEFDQFIHNT-IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
K GL+ +Q + T I+ MY+ +ARL+FD V+ + + V WN+MI G + G +D+
Sbjct: 89 CKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDK-NSVTWNTMIDGYMRSGRVDD 147
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+ ++FD+M R+ +SW +MI+G+V+ +EAL FREMQ +KP +++ L ACA
Sbjct: 148 AAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAALAACAN 207
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
LGA+ G W+H F+V+ F+ N V ++ID+YC+CGC E A QVF+ + K+ + WNS+
Sbjct: 208 LGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKRTVVSWNSV 267
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ G A NG+ +E++ F +Q KPD ++F LTAC+H G V + YF M Y+
Sbjct: 268 IVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYR 327
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN-IEMAKQA 412
I P I+HY C+VD RAG LEEA K++ SMP P+ ++ GSLL+ACR HGN E+A++
Sbjct: 328 ISPRIEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVIGSLLAACRTHGNDTELAERM 387
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
K++ EL YV++SN+YAA Q+E A + R MK + ++K+PG S IE+D H
Sbjct: 388 MKRLSELKVKGHSNYVILSNMYAADGQWEGASKMRRKMKGLGLKKQPGFSSIEIDDRTHV 447
Query: 473 FVAGGRLH 480
F+AG H
Sbjct: 448 FMAGDSAH 455
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 126/311 (40%), Gaps = 65/311 (20%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL ++ + + S A LVF +++ N WNT+I G+ +S
Sbjct: 84 LHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMRSG 143
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
+A +F +M + S ++P + +
Sbjct: 144 RVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAALA 203
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A LG G +H VV Q + + + N++I +Y CG + AR +FDE++ VV
Sbjct: 204 ACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKR-TVV 262
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G ES L FR MQE+
Sbjct: 263 SWNSVIVGFAANGHAHES-------------------------------LVYFRRMQEER 291
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCPER 274
KP T L AC+ +G + +G + + + ++ + ++D+Y + G E
Sbjct: 292 FKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRD-YRISPRIEHYGCLVDLYSRAGRLEE 350
Query: 275 ALQVFNTVPKK 285
AL+V ++P K
Sbjct: 351 ALKVVESMPMK 361
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 44/264 (16%)
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
++ S TVSW S I+ RN + EA + F M+ ++P+ T+++LL+ CA
Sbjct: 21 LNQSTSETTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEPF 80
Query: 238 RQGEWIHNFLVTNCFELNTIVV-TAIIDMYCK---------------------------- 268
G+ +H + + N ++V TAI+ MY K
Sbjct: 81 --GDSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDG 138
Query: 269 ---CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
G + A +VF+ +P++ L W +M+ G G EA+ F +Q S +KPDY++
Sbjct: 139 YMRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAV 198
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKI----KPSIKHYSCMVDALGRAGLLEEAEKLI 381
IA L AC + G ++ F L + + K +++ + ++D R G +E A ++
Sbjct: 199 IAALAACANLGALS-----FGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 253
Query: 382 RSMPSDPDAIIWGSLLSACRKHGN 405
M + W S++ +G+
Sbjct: 254 DEMEKRT-VVSWNSVIVGFAANGH 276
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 268/457 (58%), Gaps = 2/457 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A +F + ++ WN +I G++Q+ A+ LF ML S + P T S+
Sbjct: 138 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 197
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE-VDTEF 153
A A LG R G Q+H +++ + ++ + N +I YA G + AR + D+ ++T+
Sbjct: 198 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 257
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+V+++ +++ G K G+++ +R +F M +R+ V+W +MI GY +N + EA++LFR M
Sbjct: 258 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 317
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+P+ +T+ ++L+ CA L + G+ IH + + E ++ V AII MY + G
Sbjct: 318 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFP 377
Query: 274 RALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
A ++F+ V +K W SM+ LA +G EA+ LF + + ++PD I+++ VL+AC
Sbjct: 378 WARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC 437
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+H+G VN+ K Y+ + ++I P + HY+CMVD L RAGL EA++ IR MP +PDAI
Sbjct: 438 SHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIA 497
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
WGSLLSACR H N E+A+ AA++++ +D N S Y ++N+Y+A ++ +A KE
Sbjct: 498 WGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKE 557
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLL 489
+ KE G S + ++H F A +HP+ VY +
Sbjct: 558 KAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 594
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 216/488 (44%), Gaps = 80/488 (16%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ +G + A VF ++ + + W ++ G +++ AI +DM P + T
Sbjct: 3 AKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDM-TADGFTPTQFTL 61
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
++ + A G ++H VVK GL + N+++ MY CG A +F+ +
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF-R 210
V +WN+M+ G +D + LF+ M R+ VSWN+MI+GY +N +AL+LF R
Sbjct: 122 R-SVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL----------VTNCF-------- 252
+ E ++ P EFT+ S+L+ACA LG +R G+ +H ++ VTN
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 253 ---------------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
+LN I TA+++ Y K G E A ++F + + + W +M+ G
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT-----ACNHSGKVNQAKDYFTLMTETY 352
NG +EAI LF + + +P+ + AVL+ AC GK + +L+ ++
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360
Query: 353 KIKPSI--------------------------KHYSCMVDALGRAGLLEEAEKLIRSM-- 384
+ +I ++ M+ AL + G EEA L M
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420
Query: 385 -PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES------CGYVLMSNLYAAS 437
+PD I + +LSAC G + K+ QI KNE Y M +L A +
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI----KNEHQIAPEMSHYACMVDLLARA 476
Query: 438 YQFEEAME 445
F EA E
Sbjct: 477 GLFSEAQE 484
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 82/246 (33%), Gaps = 68/246 (27%)
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
M+ K G A VF +P++ W MV GL G EAIK + + P +
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 325 FIAVLTAC--NHSGKVNQAKDYFTL--------------------------MTETYKIKP 356
VL++C +G V + F + T ++ P
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 357 --SIKHYSCMVDALGRAGLLEEAEKLIRSMPSD--------------------------- 387
S+ ++ MV G ++ AE L SMP
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 388 --------PDAIIWGSLLSACRKHGNIEMAKQAAKQII--ELDKNESCGYVLMSNLYAAS 437
PD S+LSAC GN+ + KQ I+ E+ N L+S YA S
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST-YAKS 239
Query: 438 YQFEEA 443
E A
Sbjct: 240 GSVENA 245
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 272/504 (53%), Gaps = 45/504 (8%)
Query: 1 MKDLKKIHAHLIKTG--LAKDPIAASRILAFCTSPAGD----INYAYLVFTQIKKPNLFI 54
++ L ++HA +K G L P +R+L CT + + YA VF +I P I
Sbjct: 41 LRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVI 100
Query: 55 W-NTIIRGFSQSSTPRNAIL----LFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQ 109
W NT++RG+++ +F+ M+ + P T+ SL KA A +G Q
Sbjct: 101 WYNTLLRGYARGGGGGGGAEEAARVFVRMM-EEGVAPDTYTFVSLLKACASARAGEEGRQ 159
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
HG VK G +++ T+I MYA +CG
Sbjct: 160 AHGVAVKAGAAEHEYVAPTLINMYA--------------------------------ECG 187
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
++ +R +FD+M VS+N+MI+ VR+ EAL LFREMQ + +KP+ T++S+L+
Sbjct: 188 DVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLS 247
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
ACA LGA+ G WIH+++ + V TA+IDMY KCG E A+ VF + +
Sbjct: 248 ACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQA 307
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
W+ M+ A +GY EAI +F ++ +KPD ++F+ VL AC+HSG V++ YF M
Sbjct: 308 WSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR 367
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
E Y I IKHY C+ D L R+G LE A K I +P P AI+W +LLSAC HG+++M
Sbjct: 368 E-YGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMG 426
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGE 469
K+ ++I+ELD + YV+ SNL A + ++EE R LM E + K PGCS IE+D
Sbjct: 427 KRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNM 486
Query: 470 VHEFVAGGRLHPKAPEVYLLLNDL 493
VHEF AG HP + E +++++
Sbjct: 487 VHEFFAGDGSHPHSQEARRMVDEV 510
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 182/504 (36%), Positives = 272/504 (53%), Gaps = 45/504 (8%)
Query: 1 MKDLKKIHAHLIKTG--LAKDPIAASRILAFCTSPAGD----INYAYLVFTQIKKPNLFI 54
++ L ++HA +K G L P +R+L CT + + YA VF +I P +
Sbjct: 41 LRALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVV 100
Query: 55 W-NTIIRGFSQSSTPRNAIL----LFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQ 109
W NT++RG+++ +F+ M+ + P T+ SL KA A +G Q
Sbjct: 101 WYNTLLRGYARGGGGGGGAEEAARVFVRMM-EEGVAPDTYTFVSLLKACASARAGEEGRQ 159
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
HG VK G +++ T+I MYA +CG
Sbjct: 160 AHGVAVKAGAAEHEYVAPTLINMYA--------------------------------ECG 187
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
++ +R +FD+M VS+N+MI+ VR+ EAL LFREMQ + +KP+ T++S+L+
Sbjct: 188 DVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLS 247
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
ACA LGA+ G WIH+++ + V TA+IDMY KCG E A+ VF + +
Sbjct: 248 ACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQA 307
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
W+ M+ A +GY EAI +F ++ +KPD ++F+ VL AC+HSG V++ YF M
Sbjct: 308 WSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGLQYFDSMR 367
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
E Y I IKHY C+ D L R+G LE A K I +P P AI+W +LLSAC HG+++M
Sbjct: 368 E-YGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAGHGDVDMG 426
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGE 469
K+ ++I+ELD + YV+ SNL A + ++EE R LM E + K PGCS IE+D
Sbjct: 427 KRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCSSIEIDNM 486
Query: 470 VHEFVAGGRLHPKAPEVYLLLNDL 493
VHEF AG HP + E +++++
Sbjct: 487 VHEFFAGDGSHPHSQEARRMVDEV 510
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 274/490 (55%), Gaps = 36/490 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K H +I+ GL D + S +L S G I A VF +I + ++ WN +I Q
Sbjct: 18 KACHGQVIRLGLETDTLT-SNMLMNMYSKCGLIRRACKVFDEIPERSMVSWNIMIGTCVQ 76
Query: 65 SSTPRNAILLFIDMLVT-SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ AI +F++M SP T S+ A A G QLH +K ++ D
Sbjct: 77 NGEEEKAIDIFLEMQREGSPCS--EFTVSSVVCACAAKGDVFFCRQLHAFAIKAVVDADV 134
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ +I +YA KCG I+++ +F+ M
Sbjct: 135 FVGTALIDVYA--------------------------------KCGSIEDASCVFEGMPE 162
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
RN V+W+S+++G+V+N ++E L LF +E ++ ++F + S++ ACA L A+ +G +
Sbjct: 163 RNDVTWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQV 222
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H + F N V +A++DMY KCG E A +F + KK + WN+++ G A +
Sbjct: 223 HAIVCRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACS 282
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+E + LF +Q + ++PD ++++AVL+AC H G V++ + YF LMT + + P++ HYSC
Sbjct: 283 SEVMNLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSC 342
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGR GL+ EA +L+ MP A +WGSLL++CR HGN+E+A+ AAK + E++ +
Sbjct: 343 MVDILGRGGLVHEAHELMTKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDR 402
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
YVL++N YAAS ++EEA + R +K +I KE G S IE+ +VH F+AG R HP+
Sbjct: 403 GGNYVLLANTYAASKKWEEAAKARKSLKGSEILKERGKSWIEIKDKVHTFMAGERTHPRI 462
Query: 484 PEVYLLLNDL 493
++YL LN+L
Sbjct: 463 TDIYLELNNL 472
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
SLL CAK G+ H ++ E +T+ +++MY KCG RA +VF+ +P++
Sbjct: 3 SLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPER 62
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
+ WN M+ NG E +AI +F +Q + +V+ AC G V +F
Sbjct: 63 SMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDV-----FF 117
Query: 346 TLMTETYKIKPSIKH----YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ IK + + ++D + G +E+A + MP D + W S+++
Sbjct: 118 CRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERND-VTWSSIVAG 174
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 272/484 (56%), Gaps = 39/484 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTII 59
M + K+HA L+KTG P+A R+L C + A ++YA +F I P+ F +NTII
Sbjct: 1 MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTII 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R + + + + L + + + P T+P + KA A+L + G LH + K G
Sbjct: 61 R--AHADSSPSFSLSLFSKMAMAGVSPDHFTFPFVLKACARL---QTGLDLHSLLFKLGF 115
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D ++ N +I+ Y CGF +D + ++F+
Sbjct: 116 DSDVYVQNGLIHFYGCCGF--------------------------------LDFALKVFE 143
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIR 238
+M R+ VSW+SMI+ + +N EAL LF+ MQ +KP E ++S+++A + LG +
Sbjct: 144 EMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLE 203
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+WI F+ N E + TA++DM+ +CGC E +++VF+ + ++ + W +++ GLA
Sbjct: 204 LGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLA 263
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G EA+++F +++ +PD+++F VL AC+H G V++ F + Y ++P
Sbjct: 264 VHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLP 323
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD LGRAGLL EA K + MP P++IIW +LL AC H IE+A++ ++I E
Sbjct: 324 EHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINE 383
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD YVL+SN+Y ++ E R M+E +I K+PGCSLI V+ +HEFVAG
Sbjct: 384 LDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDN 443
Query: 479 LHPK 482
HP+
Sbjct: 444 NHPQ 447
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 170/490 (34%), Positives = 284/490 (57%), Gaps = 7/490 (1%)
Query: 4 LKKIHAHLIKTGL--AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
LK+IHA + GL + P+A + + + G+ A VF I+ P+ + ++I
Sbjct: 19 LKQIHAQALTQGLLFIEQPLACKLVNRY--AKLGNPRDAQKVFGYIQDPDRVTYTSLINL 76
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ + P A +F LV ++P + A + +G +HG + + L
Sbjct: 77 YLSTQLPIKAFSVF-SKLVNEGLRPDSHSVVGALSACGKKQDLLNGKLVHGMIFRFQLGA 135
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ + N +I MY G + A+L+F ++ + DV +W S++ G C ++ +RR+FD+M
Sbjct: 136 NSIVGNALIDMYCRNGEIKIAQLVFKQMGIK-DVSSWTSLLNGFVMCNGLESARRVFDEM 194
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQG 240
RN V+W +MI+GYVR LE+FR+M+ E +P+ T V++L+ CA LGA G
Sbjct: 195 PWRNDVAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVITAVAVLSGCADLGAHDHG 254
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H ++ + V A++DMY K GC E A+++F+ + KK + W +M+ + +
Sbjct: 255 QAVHGYISKVNLDKGVTVSNALMDMYSKGGCVESAMKIFDRLVKKDVFSWTTMISAHSSH 314
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G N A+++F + S + P+ ++F+ VL+ C+HSG + +A F M + Y +P I+H
Sbjct: 315 GKGNHALEVFYDMLESGVIPNDVTFLLVLSGCSHSGLLVEANKLFNGMIQCYGFEPKIEH 374
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD L RAGLLEEA++LI +MP DPDA+IW SLLSAC N+ +A+ A K+IIEL+
Sbjct: 375 YGCMVDLLCRAGLLEEAKELIDNMPMDPDAVIWRSLLSACMNQRNLGLAEIAGKKIIELE 434
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
++ YVL+SN+Y + + ++A + R +M + K+ K+P CS IE++G VH+F H
Sbjct: 435 PHDDGVYVLLSNIYHVANRMKDARKMRKMMGDQKVMKKPACSYIELNGVVHQFHTENATH 494
Query: 481 PKAPEVYLLL 490
+ ++Y+LL
Sbjct: 495 HASTKIYMLL 504
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 176/498 (35%), Positives = 277/498 (55%), Gaps = 4/498 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA +I+ DP AS ++ + +G A VF + N W +I GF Q
Sbjct: 310 KQLHAQVIRNLPHIDPYVASALVEL-YAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ 368
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ LF M Q + +++ L G QLH +K G
Sbjct: 369 YGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL-GRQLHSLCLKSGQIQAVV 427
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I MYA C L A +F ++ E D+V+W SMI ++ G + ++R FD M +
Sbjct: 428 VSNSLISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMITAYSQVGNVAKAREFFDGMSEK 486
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N ++WN+M+ Y+++ ++ L +++ M E+ ++P T V+L CA LGA + G+ I
Sbjct: 487 NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQI 546
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
V ++T V A+I MY KCG A +VF+ + K + WN+M+ G + +G
Sbjct: 547 IGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMG 606
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+AI++F + KPDYIS++AVL+ C+HSG V + K YF +M + I P ++H+SC
Sbjct: 607 KQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSC 666
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG L EA+ LI MP P A +WG+LLSAC+ HGN E+A+ AAK + ELD +
Sbjct: 667 MVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPD 726
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S Y+LM+ +YA + + +++ + R LM++ I+K PG S +EVD +VH F A HP+
Sbjct: 727 SGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQV 786
Query: 484 PEVYLLLNDLGLLIQEMG 501
+ L++L I +G
Sbjct: 787 LAIRKKLDELMEKIARLG 804
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 206/424 (48%), Gaps = 10/424 (2%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A +F ++ ++ WNT++ G+ QS ++ F+ M + P T
Sbjct: 105 GRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACA 164
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
K+ LG QL V K + D + ++ M+ CG + A +F + E
Sbjct: 165 MKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRI-KEPT 223
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+ NSM+ G K +D + LFD M R+ VSWN M+S ++ + +EAL++ +MQ
Sbjct: 224 MFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS 283
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+ ++ T S L ACA+L ++R G+ +H ++ N ++ V +A++++Y K GC +
Sbjct: 284 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKE 343
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VFN++ + W ++ G G E+++LF+ +++ + D + +++ C
Sbjct: 344 AKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCS 403
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+ + +L ++ +I+ + S ++ + L+ AE + R M ++ D + W
Sbjct: 404 RMDLCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAEAIFRFM-NEKDIVSWT 461
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
S+++A + GN+ A++ + E KN V+ N +Y A E+ L M +V
Sbjct: 462 SMITAYSQVGNVAKAREFFDGMSE--KN-----VITWNAMLGAYIQHGAEEDGLRMYKVM 514
Query: 455 IEKE 458
+ +E
Sbjct: 515 LSEE 518
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 171/353 (48%), Gaps = 50/353 (14%)
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
HGR+V GL F+ NT+++ Y +CG LS+AR + +V+ N M+ G AK G
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLLN 229
+ ++ LF +M +R+ SWN+++SGY ++ ++ +LE F M P+ FT+ +
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 166
Query: 230 ACAKLG----AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC-------------- 271
+C LG A++ + F + ++ V A++DM+ +CG
Sbjct: 167 SCGALGWHSLALQLLAMVQKFDSQD----DSEVAAALVDMFVRCGAVDLASRLFVRIKEP 222
Query: 272 -----------------PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ 314
+ AL++F+++P++ + WN MV L+ +G EA+ + +Q
Sbjct: 223 TMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQ 282
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAG 372
S ++ D ++ + LTAC + K L + + P I Y S +V+ ++G
Sbjct: 283 SKGVRLDSTTYTSSLTACARLSSLRWGKQ---LHAQVIRNLPHIDPYVASALVELYAKSG 339
Query: 373 LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG----NIEMAKQAAKQIIELDK 421
+EA+ + S+ D + + W L+S ++G ++E+ Q +++ LD+
Sbjct: 340 CFKEAKGVFNSL-HDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQ 391
>gi|115441803|ref|NP_001045181.1| Os01g0914600 [Oryza sativa Japonica Group]
gi|20804987|dbj|BAB92663.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113534712|dbj|BAF07095.1| Os01g0914600 [Oryza sativa Japonica Group]
Length = 589
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 274/522 (52%), Gaps = 70/522 (13%)
Query: 38 NYAYLVFTQIKKP---NLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
++A VF + + + F WNT++R +++PR ++L F M + + P T+P++
Sbjct: 65 DHADSVFAHLAEEASRHAFPWNTLVR-LHAAASPRRSLLYFSRMR-RAAVAPDAYTFPAV 122
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
KA R G +HG V+ GL+ D F N +I Y G R +FD D
Sbjct: 123 LKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDH--GVRD 180
Query: 155 VVAWNSMIIGLAKCGE--------------------------------IDESRRLFDKMV 182
+V+WNSM+ G CGE +D +R LFD+M
Sbjct: 181 LVSWNSMVAGYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMP 240
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-------------------------- 216
R+ V WNSMI GY R+ + EA LF EM E+N
Sbjct: 241 DRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQR 300
Query: 217 -----IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
IKP V + ACA+LGA+ QG W+H++L + +V TA+IDMY KCG
Sbjct: 301 MLRCGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGR 360
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ A +F ++PKK + WN M+ GL +GY +AIKLF+ +++ D +S +AVLT+
Sbjct: 361 LDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSILAVLTS 420
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H+G V++ F M + ++P ++HY ++D LGRAG +++A I +MP +P
Sbjct: 421 CTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPE 480
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+WGSLL++CR H +E+A+ + +++ L ++S YVL+SN+YA +++ R LM
Sbjct: 481 LWGSLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMS 540
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
++K G S+IEVDG++HEFV GG HP E+YL L +L
Sbjct: 541 AEGMKKNIGRSVIEVDGQIHEFVNGGSSHPHKEEIYLTLWNL 582
>gi|359491264|ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 684
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 294/508 (57%), Gaps = 9/508 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPN--LFIWNTI 58
+ L++IHA ++ L+ + + + L C A + A ++F P+ + +WN +
Sbjct: 87 LSPLQQIHAQVVTQALSSNA-SLTASLIHCYLCAKNHPNARILFDHYPSPSPPIKLWNVM 145
Query: 59 IRGFSQSSTPRNAILLFIDML-VTSPIQ--PQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
IR +S+ + I LF+ ML + P+Q P T+ + + + G +HG VV
Sbjct: 146 IRTYSKIRNSQEPIHLFLRMLTLDGPMQVVPDEYTFTFVITSCSHQISLIYGEIVHGMVV 205
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G E + ++ N++I M + + +AR +F+++ +E DV +W S++ G AK GE+D +
Sbjct: 206 KSGFESNLYVGNSVINMCSVFARMEDARKVFNQM-SERDVFSWTSLLGGYAKHGEMDRAC 264
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKL 234
LF+ M RN VSW MISG++ ++ EAL F M + + P+E +V +L+ACA L
Sbjct: 265 ELFNMMPVRNDVSWAVMISGFLGCGRYPEALTFFCNMLCDDRVNPNEAVLVCVLSACAHL 324
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA+ QG WIH ++ ++ + TA+IDMY KCG + A +VFN + K+ + + SM+
Sbjct: 325 GALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMI 384
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GL+ +G +A+++F + N+ P+ I+ + VL C+HSG V + M + I
Sbjct: 385 SGLSYHGLGKDALRVFYQMLDENVMPNEITILGVLNGCSHSGLVEEGSSILANMESLWGI 444
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P I+HY C +D LGRAG LE A +++++MP +PD +IW +LLSA R H N+ + +Q
Sbjct: 445 APKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLSASRIHHNVNLGEQIIS 504
Query: 415 QIIELDKNE-SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
I +L ++ + G VL+SNLYA+ ++E E R LM + + E PGCS IEV+G VHEF
Sbjct: 505 HIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSESSPGCSWIEVNGLVHEF 564
Query: 474 VAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+LHP+ E+ LN++ + ++G
Sbjct: 565 RVADQLHPQIVEIRNKLNEILKRLSQIG 592
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 268/457 (58%), Gaps = 2/457 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A +F + ++ WN +I G++Q+ A+ LF ML S + P T S+
Sbjct: 244 GRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE-VDTEF 153
A A LG R G Q+H +++ + ++ + N +I YA G + AR + D+ ++T+
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 363
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+V+++ +++ G K G+++ +R +F M +R+ V+W +MI GY +N + EA++LFR M
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+P+ +T+ ++L+ CA L + G+ IH + + E ++ V AII MY + G
Sbjct: 424 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFP 483
Query: 274 RALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
A ++F+ V +K W SM+ LA +G EA+ LF + + ++PD I+++ VL+AC
Sbjct: 484 WARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC 543
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+H+G VN+ K Y+ + ++I P + HY+CMVD L RAGL EA++ IR MP +PDAI
Sbjct: 544 SHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIA 603
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
WGSLLSACR H N E+A+ AA++++ +D N S Y ++N+Y+A ++ +A KE
Sbjct: 604 WGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKE 663
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLL 489
+ KE G S + ++H F A +HP+ VY +
Sbjct: 664 KAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 142/550 (25%), Positives = 234/550 (42%), Gaps = 114/550 (20%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAF---CTSPAGDINYAYLVFTQI--KKPNLFIWNTII 59
+ IHA +K GL + +L++ AG + A +F +I + N+F WN+++
Sbjct: 46 RAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSLL 105
Query: 60 RGFSQSSTPRNAILLFIDM------------------------------LVTSPIQPQRL 89
F++S +A +F +M + P +
Sbjct: 106 SMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF 165
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T ++ + A G ++H VVK GL + N+++ MY CG A +F+ +
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 225
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
V +WN+M+ G +D + LF+ M R+ VSWN+MI+GY +N +AL+LF
Sbjct: 226 PVR-SVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 210 -REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL----------VTNCF------ 252
R + E ++ P EFT+ S+L+ACA LG +R G+ +H ++ VTN
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 344
Query: 253 -----------------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+LN I TA+++ Y K G E A ++F + + + W +M+
Sbjct: 345 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 404
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT-----ACNHSGKVNQAKDYFTLMTE 350
G NG +EAI LF + + +P+ + AVL+ AC GK + +L+ +
Sbjct: 405 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQ 464
Query: 351 TYKIKPSI--------------------------KHYSCMVDALGRAGLLEEAEKLIRSM 384
+ + +I ++ M+ AL + G EEA L M
Sbjct: 465 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 524
Query: 385 ---PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES------CGYVLMSNLYA 435
+PD I + +LSAC G + K+ QI KNE Y M +L A
Sbjct: 525 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI----KNEHQIAPEMSHYACMVDLLA 580
Query: 436 ASYQFEEAME 445
+ F EA E
Sbjct: 581 RAGLFSEAQE 590
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 170/347 (48%), Gaps = 47/347 (13%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYA----NCGFLSEARLMFDEVD-TEFDVVAWNSM 161
G +H R VK GL ++ N ++ Y G L +AR +FDE+ +V WNS+
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 162 IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSE 221
+ AK G + ++R +F +M R+ VSW M+ G R +F EA++ +M P++
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQ 164
Query: 222 FTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
FT+ ++L++CA A G +H+F+V V ++++MY KCG E A VF
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFER 224
Query: 282 VPKKGLSCWNSMV-------------------------------FGLAMNGYENEAIKLF 310
+P + +S WN+MV G NG + +A+KLF
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 311 SG-LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL- 368
S L S++ PD + +VL+AC + G V K Y ++ + + S + +AL
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ-----VHAYILRTEMAYNSQVTNALI 339
Query: 369 ---GRAGLLEEAEKLI-RSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
++G +E A +++ +SM +D + I + +LL K G++E A++
Sbjct: 340 STYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESARE 386
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 266/460 (57%), Gaps = 9/460 (1%)
Query: 49 KPN---LFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLAR 105
KPN W + I +++ A FI ML + ++P +T +L A A
Sbjct: 46 KPNSNQTVSWTSSISHHCKNNNFLKAASEFIQML-EAEVEPNHITLITLLSACAHSPSKT 104
Query: 106 D---GAQLHGRVVKQGLEF-DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM 161
GA LH K G D + +I MYA CG L ARL+FD++ ++V+WN+M
Sbjct: 105 SITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVR-NLVSWNTM 163
Query: 162 IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSE 221
I G K G++D++ +LFDK+ +N VSW +I G+V+ ++EALE FREMQ + P
Sbjct: 164 IDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDF 223
Query: 222 FTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
T++++++ACA LGA+ G W+H ++ F N V+ ++IDMY +CGC E A QVF+
Sbjct: 224 VTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDG 283
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+ ++ L WNS++ G A+NG ++A+ F ++ L+P+ +S+ + LTAC+H+G +++
Sbjct: 284 MSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEG 343
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
F + ++ P I+HY C+VD RAG L+EA +I+ MP P+ ++ GSLL+ACR
Sbjct: 344 LKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACR 403
Query: 402 KHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGC 461
G++E+A++ K +EL YVL SN+YAA +++ A + R MKE ++K
Sbjct: 404 TQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAF 463
Query: 462 SLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
S IE+D +H+FV+G + H + +Y L L + G
Sbjct: 464 SSIEIDSGIHKFVSGDKYHEENDYIYSALELLSFELHLYG 503
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 128/261 (49%), Gaps = 37/261 (14%)
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
+++ L K S TVSW S IS + +N F +A F +M E ++P+ T+++LL+AC
Sbjct: 38 NQTLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSAC 97
Query: 232 A---KLGAIRQGEWIHNFLVTNCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVPKKGL 287
A +I G +H + F +N ++V TA+IDMY KCG + A VF+ + + L
Sbjct: 98 AHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNL 157
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGL-------------------------------QSS 316
WN+M+ G NG ++A+KLF L Q +
Sbjct: 158 VSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLA 217
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE 376
+ PD+++ IA+++AC + G + L+ + + + ++K + ++D R G +E
Sbjct: 218 GVVPDFVTVIAIISACANLGALGLGLWVHRLVMKK-EFRDNVKVLNSLIDMYARCGCIEL 276
Query: 377 AEKLIRSMPSDPDAIIWGSLL 397
A ++ M S + + W S++
Sbjct: 277 ARQVFDGM-SQRNLVSWNSII 296
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 130/310 (41%), Gaps = 67/310 (21%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H H K G A + + L + G ++YA LVF Q+ NL WNT+I G+ ++
Sbjct: 112 LHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNG 171
Query: 67 TPRNAILLFIDMLVTSPIQ------------------------------PQRLTYPSLFK 96
+A+ LF + V + + P +T ++
Sbjct: 172 DVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIIS 231
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A LG G +H V+K+ + + N++I MYA CG + AR +FD + ++ ++V
Sbjct: 232 ACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGM-SQRNLV 290
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G D +AL FR M+++
Sbjct: 291 SWNSIIVGFAVNGLAD-------------------------------KALSFFRSMKKEG 319
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT---AIIDMYCKCGCPE 273
++P+ + S L AC+ G I +G I F N+ + ++D+Y + G +
Sbjct: 320 LEPNGVSYTSALTACSHAGLIDEGLKI--FADIKRDHRNSPRIEHYGCLVDLYSRAGRLK 377
Query: 274 RALQVFNTVP 283
A V +P
Sbjct: 378 EAWDVIKKMP 387
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 280/495 (56%), Gaps = 37/495 (7%)
Query: 42 LVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL 101
++F + + +NT+I GF+ + A+ +F+ M ++P T+ S+ A QL
Sbjct: 110 VIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQ-KEGLKPTEYTHVSVLNACTQL 168
Query: 102 GLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM 161
R G Q+HGR++ L + F+ N + +YA CG + +AR +FD + +VV WN M
Sbjct: 169 LDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIR-NVVTWNLM 227
Query: 162 IIGLAK-----------------------------------CGEIDESRRLFDKMVSRNT 186
I G K G IDE+R++F ++ ++
Sbjct: 228 ISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDE 287
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
V W MI G +N K ++AL LF EM +N +P +T+ S++++CAKL ++ G+ +H
Sbjct: 288 VCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGK 347
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ +V +A++DMYCKCG A +F+T+ + + WNSM+ G A+NG + EA
Sbjct: 348 AFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEA 407
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+ L+ + NLKPD ++F+ VL+AC H+G V + K+YF M++ + ++P+ HY+CMV+
Sbjct: 408 LSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVN 467
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
GR+G +++A LI SM +P+++IW ++LS C G+I+ + AA+ +IEL+ +
Sbjct: 468 LFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVP 527
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
Y+++SN+YAA ++++ R LMK ++K S IE+D EVH+FVA R HP A +
Sbjct: 528 YIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKII 587
Query: 487 YLLLNDLGLLIQEMG 501
++ LN L +QE G
Sbjct: 588 HVQLNRLIRKLQEAG 602
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 170/294 (57%), Gaps = 8/294 (2%)
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D FIHN ++ +YA G +S AR +FDE+ T+ D +WN+M+ AK G +++ R +FD M
Sbjct: 57 DTFIHNRLLNLYAKSGEISHARKLFDEM-TQRDNFSWNAMLSLYAKSGLVEDLRVIFDNM 115
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
SR++VS+N++ISG+ N + AL +F MQ++ +KP+E+T VS+LNAC +L +R+G+
Sbjct: 116 PSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGK 175
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH ++ N V A+ D+Y +CG ++A ++F+ + + + WN M+ G N
Sbjct: 176 QIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNR 235
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ I LF +Q SNLKPD ++ +VL A +G +++A+ F + E ++ +I
Sbjct: 236 QPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIV 295
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK-----HGNIEMAK 410
C + LL +E L+ + + PD S++S+C K HG + K
Sbjct: 296 GCAQNGKEEDALLLFSEMLLEN--ARPDGYTISSVVSSCAKLASLYHGQVVHGK 347
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 153/340 (45%), Gaps = 52/340 (15%)
Query: 5 KKIHAHLIKTGLAKDPI---AASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K+IH +I L + A + + A C G+I+ A +F ++ N+ WN +I G
Sbjct: 175 KQIHGRIIICNLGGNVFVCNALTDLYARC----GEIDQARRLFDRMVIRNVVTWNLMISG 230
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ ++ P I LF +M V S ++P ++T S+ AY Q G + ++ G + E
Sbjct: 231 YLKNRQPEKCIDLFHEMQV-SNLKPDQVTASSVLGAYIQAGYIDEARKVFGEI----REK 285
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEF---------------------------- 153
D+ +I A G +A L+F E+ E
Sbjct: 286 DEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVH 345
Query: 154 ----------DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
D++ ++++ KCG ++ +F M +RN VSWNSMI GY N +
Sbjct: 346 GKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDL 405
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAI 262
EAL L+ M E+N+KP T V +L+AC G + +G E+ + + E +
Sbjct: 406 EALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACM 465
Query: 263 IDMYCKCGCPERALQVFNTVPKKGLS-CWNSMVFGLAMNG 301
++++ + G ++A+ + +++ ++ S W +++ M G
Sbjct: 466 VNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKG 505
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 276/498 (55%), Gaps = 33/498 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H+ I++GL D + + S G ++ VF +++ ++ W +I G+ +
Sbjct: 289 KQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348
Query: 65 S-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ + AI LF +M+ ++P T+ S FKA L R G Q+ G+ K+GL +
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ N++I M+ K +++++R F+ +
Sbjct: 409 SVANSVISMFV--------------------------------KSDRMEDAQRAFESLSE 436
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+N VS+N+ + G RN+ F++A +L E+ E+ + S FT SLL+ A +G+IR+GE I
Sbjct: 437 KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQI 496
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H+ +V N V A+I MY KCG + A +VFN + + + W SM+ G A +G+
Sbjct: 497 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFA 556
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
++ F+ + +KP+ ++++A+L+AC+H G V++ +F M E +KIKP ++HY+C
Sbjct: 557 IRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD L RAGLL +A + I +MP D ++W + L ACR H N E+ K AA++I+ELD NE
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNE 676
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
Y+ +SN+YA + ++EE+ E R MKE + KE GCS IEV ++H+F G HP A
Sbjct: 677 PAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNA 736
Query: 484 PEVYLLLNDLGLLIQEMG 501
++Y L+ L I+ G
Sbjct: 737 HQIYDELDRLITEIKRCG 754
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 194/417 (46%), Gaps = 27/417 (6%)
Query: 19 DPIAASRILAFCTSPA----GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILL 74
D + S +L C G + +A L+ I+ P+ ++N++I +S+S A +
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIE-PDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 75 FIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYA 134
F M + +++ ++ Y G D ++ ++ GL + + + +I +
Sbjct: 120 FETMRRFG--KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 135 NCGFLSEARL----MFDEVDTEFDVVAWNSMIIGLAKCGE--IDESRRLFDKMVSRNTVS 188
N F+ R+ + E DV S+I K GE + + ++FDKM N V+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVT 236
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
W MI+ ++ +EA+ F +M + +FT+ S+ +ACA+L + G+ +H++ +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 249 TNCFELNTIVVTAIIDMYCKC---GCPERALQVFNTVPKKGLSCWNSMVFGLAMN-GYEN 304
+ L V +++DMY KC G + +VF+ + + W +++ G N
Sbjct: 297 RS--GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 305 EAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK--IKPSIKHY 361
EAI LFS + +++P++ +F + AC G ++ + ++ + +K + +
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKAC---GNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ ++ ++ +E+A++ S+ S+ + + + + L ++ N E A + +I E
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESL-SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 176/498 (35%), Positives = 277/498 (55%), Gaps = 4/498 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA +I+ DP AS ++ + +G A VF + N W +I GF Q
Sbjct: 290 KQLHAQVIRNLPHIDPYVASALVEL-YAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ 348
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ LF M Q + +++ L G QLH +K G
Sbjct: 349 YGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL-GRQLHSLCLKSGQIQAVV 407
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I MYA C L A +F ++ E D+V+W SMI ++ G + ++R FD M +
Sbjct: 408 VSNSLISMYAKCDNLQSAEAIFRFMN-EKDIVSWTSMITAYSQVGNVAKAREFFDGMSEK 466
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N ++WN+M+ Y+++ ++ L +++ M E+ ++P T V+L CA LGA + G+ I
Sbjct: 467 NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQI 526
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
V ++T V A+I MY KCG A +VF+ + K + WN+M+ G + +G
Sbjct: 527 IGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMG 586
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+AI++F + KPDYIS++AVL+ C+HSG V + K YF +M + I P ++H+SC
Sbjct: 587 KQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSC 646
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG L EA+ LI MP P A +WG+LLSAC+ HGN E+A+ AAK + ELD +
Sbjct: 647 MVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPD 706
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S Y+LM+ +YA + + +++ + R LM++ I+K PG S +EVD +VH F A HP+
Sbjct: 707 SGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQV 766
Query: 484 PEVYLLLNDLGLLIQEMG 501
+ L++L I +G
Sbjct: 767 LAIRKKLDELMEKIARLG 784
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 206/424 (48%), Gaps = 10/424 (2%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A +F ++ ++ WNT++ G+ QS ++ F+ M + P T
Sbjct: 85 GRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACA 144
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
K+ LG QL V K + D + ++ M+ CG + A +F + E
Sbjct: 145 MKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRI-KEPT 203
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+ NSM+ G K +D + LFD M R+ VSWN M+S ++ + +EAL++ +MQ
Sbjct: 204 MFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS 263
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+ ++ T S L ACA+L ++R G+ +H ++ N ++ V +A++++Y K GC +
Sbjct: 264 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKE 323
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VFN++ + W ++ G G E+++LF+ +++ + D + +++ C
Sbjct: 324 AKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCS 383
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+ + +L ++ +I+ + S ++ + L+ AE + R M ++ D + W
Sbjct: 384 RMDLCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAEAIFRFM-NEKDIVSWT 441
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
S+++A + GN+ A++ + E KN V+ N +Y A E+ L M +V
Sbjct: 442 SMITAYSQVGNVAKAREFFDGMSE--KN-----VITWNAMLGAYIQHGAEEDGLRMYKVM 494
Query: 455 IEKE 458
+ +E
Sbjct: 495 LSEE 498
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 171/353 (48%), Gaps = 50/353 (14%)
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
HGR+V GL F+ NT+++ Y +CG LS+AR + +V+ N M+ G AK G
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK-PSEFTMVSLLN 229
+ ++ LF +M +R+ SWN+++SGY ++ ++ +LE F M P+ FT+ +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 146
Query: 230 ACAKLG----AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC-------------- 271
+C LG A++ + F + ++ V A++DM+ +CG
Sbjct: 147 SCGALGWHSLALQLLAMVQKFDSQD----DSEVAAALVDMFVRCGAVDLASRLFVRIKEP 202
Query: 272 -----------------PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ 314
+ AL++F+++P++ + WN MV L+ +G EA+ + +Q
Sbjct: 203 TMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQ 262
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAG 372
S ++ D ++ + LTAC + K L + + P I Y S +V+ ++G
Sbjct: 263 SKGVRLDSTTYTSSLTACARLSSLRWGKQ---LHAQVIRNLPHIDPYVASALVELYAKSG 319
Query: 373 LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG----NIEMAKQAAKQIIELDK 421
+EA+ + S+ D + + W L+S ++G ++E+ Q +++ LD+
Sbjct: 320 CFKEAKGVFNSL-HDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQ 371
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 268/457 (58%), Gaps = 2/457 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A +F + ++ WN +I G++Q+ A+ LF ML S + P T S+
Sbjct: 244 GRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSV 303
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE-VDTEF 153
A A LG R G Q+H +++ + ++ + N +I YA G + AR + D+ ++T+
Sbjct: 304 LSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDL 363
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+V+++ +++ G K G+++ +R +F M +R+ V+W +MI GY +N + EA++LFR M
Sbjct: 364 NVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMI 423
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+P+ +T+ ++L+ CA L + G+ IH + + E ++ V AII MY + G
Sbjct: 424 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFP 483
Query: 274 RALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
A ++F+ V +K W SM+ LA +G EA+ LF + + ++PD I+++ VL+AC
Sbjct: 484 WARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC 543
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+H+G VN+ K Y+ + ++I P + HY+CMVD L RAGL EA++ IR MP +PDAI
Sbjct: 544 SHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIA 603
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
WGSLLSACR H N E+A+ AA++++ +D N S Y ++N+Y+A ++ +A KE
Sbjct: 604 WGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKE 663
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLL 489
+ KE G S + ++H F A +HP+ VY +
Sbjct: 664 KAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 142/550 (25%), Positives = 233/550 (42%), Gaps = 114/550 (20%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAF---CTSPAGDINYAYLVFTQI--KKPNLFIWNTII 59
+ IHA +K GL + +L++ AG + A +F +I + N+F WN+++
Sbjct: 46 RAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSLL 105
Query: 60 RGFSQSSTPRNAILLFIDM------------------------------LVTSPIQPQRL 89
F++S +A +F +M + P +
Sbjct: 106 SMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF 165
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T ++ + A G ++H VVK GL + N+++ MY CG A +F+ +
Sbjct: 166 TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERM 225
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
V +WN+M+ G +D + LF+ M R+ VSWN+MI+GY +N +AL+LF
Sbjct: 226 PVR-SVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 210 -REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL----------VTNCF------ 252
R + E ++ P EFT+ S+L+ACA LG +R G+ +H ++ VTN
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 344
Query: 253 -----------------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+LN I TA+++ Y K G E A ++F + + + W +M+
Sbjct: 345 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 404
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT-----ACNHSGKVNQAKDYFTLMTE 350
G NG +EAI LF + + +P+ + AVL+ AC GK + +L+
Sbjct: 405 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLER 464
Query: 351 TYKIKPSI--------------------------KHYSCMVDALGRAGLLEEAEKLIRSM 384
+ + +I ++ M+ AL + G EEA L M
Sbjct: 465 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 524
Query: 385 ---PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES------CGYVLMSNLYA 435
+PD I + +LSAC G + K+ QI KNE Y M +L A
Sbjct: 525 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQI----KNEHQIAPEMSHYACMVDLLA 580
Query: 436 ASYQFEEAME 445
+ F EA E
Sbjct: 581 RAGLFSEAQE 590
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 170/347 (48%), Gaps = 47/347 (13%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYA----NCGFLSEARLMFDEVD-TEFDVVAWNSM 161
G +H R VK GL ++ N ++ Y G L +AR +FDE+ +V WNS+
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 162 IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSE 221
+ AK G + ++R +F +M R+ VSW M+ G R +F EA++ +M P++
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQ 164
Query: 222 FTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
FT+ ++L++CA A G +H+F+V V ++++MY KCG E A VF
Sbjct: 165 FTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFER 224
Query: 282 VPKKGLSCWNSMV-------------------------------FGLAMNGYENEAIKLF 310
+P + +S WN+MV G NG + +A+KLF
Sbjct: 225 MPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKLF 284
Query: 311 SG-LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL- 368
S L S++ PD + +VL+AC + G V K Y ++ + + S + +AL
Sbjct: 285 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQ-----VHAYILRTEMAYNSQVTNALI 339
Query: 369 ---GRAGLLEEAEKLI-RSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
++G +E A +++ +SM +D + I + +LL K G++E A++
Sbjct: 340 STYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESARE 386
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/523 (31%), Positives = 281/523 (53%), Gaps = 45/523 (8%)
Query: 17 AKDP---IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAIL 73
+DP I + L + G I A ++F QI P + WN +I G+ Q+ A
Sbjct: 314 GRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKE 373
Query: 74 LFIDMLVTSPIQPQRLTYPSLFKAYAQ--------------------------------- 100
LF M + I ++ + YAQ
Sbjct: 374 LFDRMPFRNTI-----SWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLAC 428
Query: 101 --LGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAW 158
+G G Q+H VK G +F+ ++ N +I MY C + R +F+ + + D V+W
Sbjct: 429 SHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVK-DTVSW 487
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
NS I L + ++++R +FD M+SR+ VSW ++IS Y + + EA+E F+ M ++ K
Sbjct: 488 NSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEK 547
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
P+ + LL+ C LG+ + G+ IH + + + IV A++ MY KCGC + + +V
Sbjct: 548 PNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKV 606
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
F+++ ++ + WN+ + G A +G EAIK++ ++S + P+ ++F+ +L AC+H+G V
Sbjct: 607 FDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLV 666
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
++ +F M+ Y + P ++HY+CMVD LGR G ++ AEK I MP +PD +IW +LL
Sbjct: 667 DEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLG 726
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
AC+ H N E+ ++AA+++ + + + YV++SN+Y++ + E E R +MK+ + KE
Sbjct: 727 ACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKE 786
Query: 459 PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
PGCS +++ +VH FV G + H K E+ L DL L++ G
Sbjct: 787 PGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTG 829
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 198/444 (44%), Gaps = 86/444 (19%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRN 70
++KTG D + + IL T A ++ A F + + N + W+T+I S
Sbjct: 249 VLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDA 308
Query: 71 AILLF-IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
AI ++ D + + P Q LT GLAR
Sbjct: 309 AIAVYGRDPVKSIPSQTALLT-----------GLAR------------------------ 333
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 189
CG ++EAR++F+++ VV+WN+MI G + G +DE++ LFD+M RNT+SW
Sbjct: 334 ------CGRITEARILFEQIPDPI-VVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISW 386
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
MI+GY +N + +EAL+L + + + PS ++ S AC+ +GA+ G +H+ V
Sbjct: 387 AGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVK 446
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
+ N+ V A+I MY KC E QVFN + K WNS + L N +A +
Sbjct: 447 AGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHI 506
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
F + L D +S+ +++A + + ++A ++F M
Sbjct: 507 FDNM----LSRDVVSWTTIISAYAQAERGDEAVEFFKTM--------------------- 541
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE--LDKNESCGY 427
L E EK P++ I LLS C G+ ++ +Q I+ +D
Sbjct: 542 ----LHEHEK--------PNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVAN 589
Query: 428 VLMSNLY----AASYQFEEAMEER 447
LMS + A S++ ++MEER
Sbjct: 590 ALMSMYFKCGCADSHKVFDSMEER 613
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 180/376 (47%), Gaps = 21/376 (5%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A VF + ++ WN++I + S +A +LF D + ++ T L
Sbjct: 47 GRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILF-DAISGGNVR----TATIL 101
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
YA+LG D RV E + N ++ Y G ++ AR +FD + + D
Sbjct: 102 LSGYARLGRVLDAR----RVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSR-D 156
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V +WNSM+ G ++ ++ LF +M RN V+W MISGYVR + + ++FR M
Sbjct: 157 VTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHH 216
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK-CGCPE 273
+ P + S+L+A L + E + ++ FE + ++ T+I+++Y + +
Sbjct: 217 EGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALD 276
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A++ F+ + ++ W++M+ L+ G + AI ++ G P S A+LT
Sbjct: 277 IAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY-GRDPVKSIP---SQTALLTGLA 332
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
G++ +A+ F + + P + ++ M+ + G+++EA++L MP + I W
Sbjct: 333 RCGRITEARILFEQIPD-----PIVVSWNAMITGYMQNGMVDEAKELFDRMPF-RNTISW 386
Query: 394 GSLLSACRKHGNIEMA 409
+++ ++G E A
Sbjct: 387 AGMIAGYAQNGRSEEA 402
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 16/260 (6%)
Query: 142 ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVK 201
A L V D A ++ I LA+ G + E+R +FD M R+ ++WNSMIS Y +
Sbjct: 20 APLPVRSVHRALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGM 79
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTA 261
++A LF + N++ T LL+ A+LG + + + + E NT+ A
Sbjct: 80 LEDARILFDAISGGNVR----TATILLSGYARLGRVLDARRVFDGMP----ERNTVAWNA 131
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
++ Y + G A ++F+ +P + ++ WNSMV G + +A LF + NL
Sbjct: 132 MVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNL--- 188
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA---LGRAGLLEEAE 378
+++ +++ + + D F +M P +++ ++ A L G+LE
Sbjct: 189 -VTWTVMISGYVRIEQHGKGWDIFRMMHHE-GASPDQSNFASVLSAVTGLQDLGVLEVLR 246
Query: 379 KLIRSMPSDPDAIIWGSLLS 398
L+ + D +I S+L+
Sbjct: 247 PLVLKTGFESDVVIGTSILN 266
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 162/411 (39%), Gaps = 99/411 (24%)
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI----- 162
A L R V + L D+ H+ I A G L EAR +FD + D++AWNSMI
Sbjct: 20 APLPVRSVHRAL--DKSAHSARIRELARLGRLREAREVFDAMPHR-DIIAWNSMISAYCN 76
Query: 163 --------------------------IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY 196
G A+ G + ++RR+FD M RNTV+WN+M+S Y
Sbjct: 77 SGMLEDARILFDAISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCY 136
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
V+N A LF M +++ + ++ + A L + N
Sbjct: 137 VQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWN--------LFKQMPQRNL 188
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN-------SMVFGLA----------- 298
+ T +I Y + + +F + +G S S V GL
Sbjct: 189 VTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPL 248
Query: 299 --MNGYENE--------------------AIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
G+E++ AIK F G+ N +Y ++ ++ A +H G
Sbjct: 249 VLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERN---EY-TWSTMIAALSHGG 304
Query: 337 KVNQAKDYFTLMTETYKIKP--SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+++ A Y P SI + ++ L R G + EA L +P DP + W
Sbjct: 305 RIDAA-------IAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIP-DPIVVSWN 356
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
++++ ++G ++ AK+ + + + + M YA + + EEA++
Sbjct: 357 AMITGYMQNGMVDEAKELFDR---MPFRNTISWAGMIAGYAQNGRSEEALD 404
>gi|224097410|ref|XP_002310922.1| predicted protein [Populus trichocarpa]
gi|222850742|gb|EEE88289.1| predicted protein [Populus trichocarpa]
Length = 554
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 277/477 (58%), Gaps = 17/477 (3%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
S A + A+ VF I+ P+ +WN +IR ++S TP +I F ML+T +P TY
Sbjct: 71 SSAHHLLSAHYVFKDIQSPSTILWNQMIRAHARSQTPAKSIQFFNQMLLTDS-RPDAHTY 129
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQFIHNTIIYMYANC-----GFLSEARLM 145
L A R+G Q+H +V+ G + F+ + ++ YA L+ AR +
Sbjct: 130 SFLLAACTSSLSLREGQQVHSKVLTNGYYSSNVFLMSKLVNFYAAVVGGEGAALASARKV 189
Query: 146 FDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEA 205
FD++ +E +VV WNSM+ G + G +D +RR+F +M RN VSW +MISGY +N K K+A
Sbjct: 190 FDDM-SERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKCKQA 248
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT----A 261
L LF +M++ ++ + +++ L ACA+LG ++ G WIH+++ N V+ A
Sbjct: 249 LNLFDQMRKAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSLNNA 308
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ---SSNL 318
+I MY CG + A +VF +P++ W S++ A GY +++F +Q +S
Sbjct: 309 LIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTSEA 368
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
+PD I+FI VL AC+H+G V++ + F M + + IKP I+HY CMVD L RAG L+EA+
Sbjct: 369 RPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIEHYGCMVDLLSRAGFLDEAQ 428
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII-ELDKNESCGYV-LMSNLYAA 436
+LI +MP P+ +WG+LL CR + N E+A +++++ E D +++ GY+ L++ +YA+
Sbjct: 429 ELIATMPVKPNNAVWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLSLLAQVYAS 488
Query: 437 SYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+ ++++ R M + ++K G S ++++ H+ VAG R H +Y +L +
Sbjct: 489 AEKWQDVATVRQKMVAMGVKKPAGQSWVQINEVFHDSVAGDRTHENTSSIYEMLGKI 545
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 264/486 (54%), Gaps = 3/486 (0%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H ++K G + A+ +L F S AG + + F ++ N+ WNT+I G++Q+
Sbjct: 137 HGVVVKLGFVQQIFVANALLHFHAS-AGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAGE 195
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
A LF +M + T SL A + G G +H ++ G D+ + N
Sbjct: 196 VSEACALFGEMR-HQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGN 254
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
++ MY CG L A FD + + +VV W SM+ AK G +D R F++M RN V
Sbjct: 255 ALLDMYGKCGDLWMAHRCFDMMPIK-NVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIV 313
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
SWN+MIS YV+ + E L+L+ M+ I P EFT+ +L+AC + G + G+ IH ++
Sbjct: 314 SWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYV 373
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
N + ++ +++DMY +CG + A+ +F +P K + WN ++ LAM+G E +
Sbjct: 374 RDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETV 433
Query: 308 KLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
F + S PD I+F+ +L+AC+H G + + YF M Y ++P ++HY CMVD
Sbjct: 434 TFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDL 493
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGY 427
LGR G L +A LI+ M PD ++WG+LL ACR HGN+E+ K KQ++EL+ +
Sbjct: 494 LGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGITGGLF 553
Query: 428 VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
VL+ NL+ + Q+E+ + R LMKE +K+ G S IEV +HEF H E+Y
Sbjct: 554 VLICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEVKNIIHEFGVEDLRHESTNEIY 613
Query: 488 LLLNDL 493
++ L
Sbjct: 614 AAVDQL 619
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 205/443 (46%), Gaps = 71/443 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA-FCTSPAGD----INYAYLVFTQIKKPNLFIW 55
++ L +IHAHL+ G + AS+++A +CT AGD + +A +F +I +P+ F++
Sbjct: 23 IQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDRIPEPDRFMY 82
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
NT++R +S S P+ A+ L +L I P T P + KA + HG VV
Sbjct: 83 NTLVRAYSNSDCPQEALRLHRGVL-QRGILPNEFTLPFVLKACTTVRAVEHALAAHGVVV 141
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G F+ N +++ +A+ G L ++R F E+ + +VV+WN+MI G A+ GE+
Sbjct: 142 KLGFVQQIFVANALLHFHASAGSLRDSRRFFGEM-ADRNVVSWNTMIGGYAQAGEV---- 196
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
EA LF EM+ Q + FT+VSLL AC+ G
Sbjct: 197 ---------------------------SEACALFGEMRHQGLLADVFTLVSLLFACSSEG 229
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+ G +H ++ + ++ I+ A++DMY KCG A + F+ +P K + W SM+
Sbjct: 230 NLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLC 289
Query: 296 GLAMNG--------YE-----------------------NEAIKLFSGLQSSNLKPDYIS 324
A +G +E +E + L++ ++S + PD +
Sbjct: 290 AQAKHGSVDAVRDWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFT 349
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
VL+AC +G + K + + + P + + ++D R G ++ A L M
Sbjct: 350 LAGVLSACGQNGDLASGKMIHCYVRDNFN-DPGVTLLNSLLDMYARCGQVDTAIGLFTEM 408
Query: 385 PSDPDAIIWGSLLSACRKHGNIE 407
P + + I W ++ A HG +
Sbjct: 409 P-NKNVISWNVIIGALAMHGRAQ 430
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 4/251 (1%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G + +RRLFD++ + +N+++ Y + +EAL L R + ++ I P+EFT+ +L
Sbjct: 62 GGLCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVL 121
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
AC + A+ H +V F V A++ + G + + F + + +
Sbjct: 122 KACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVV 181
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK-DYFTL 347
WN+M+ G A G +EA LF ++ L D + +++L AC+ G + + + +
Sbjct: 182 SWNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHM 241
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ ++ + + ++D G+ G L A + MP + + W S+L A KHG+++
Sbjct: 242 LVSGSRVDRILG--NALLDMYGKCGDLWMAHRCFDMMPI-KNVVTWTSMLCAQAKHGSVD 298
Query: 408 MAKQAAKQIIE 418
+ +Q+ E
Sbjct: 299 AVRDWFEQMPE 309
>gi|218189594|gb|EEC72021.1| hypothetical protein OsI_04901 [Oryza sativa Indica Group]
Length = 589
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 274/522 (52%), Gaps = 70/522 (13%)
Query: 38 NYAYLVFTQIKKP---NLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
++A VF + + + F WNT++R +++PR ++L F M + + P T+P++
Sbjct: 65 DHADSVFAHLAEEASRHAFPWNTLVR-LHAAASPRRSLLYFSRMRRVA-VAPDAYTFPAV 122
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
KA R G +HG V+ GL+ D F N +I Y G R +FD D
Sbjct: 123 LKACGCAPGCRVGLVVHGEAVRTGLDADLFTRNALISFYCRIGDCRSGRKVFDH--GVRD 180
Query: 155 VVAWNSMIIGLAKCGEID--------------------------------ESRRLFDKMV 182
+V+WNSM+ G CGE+D +R LFD+M
Sbjct: 181 LVSWNSMVAGYVGCGEVDLAQDLFDEMRQRDAFSWATMIDGYGEMAGGVDRARELFDQMP 240
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-------------------------- 216
R+ V WNSMI GY R+ + EA LF EM E+N
Sbjct: 241 DRDLVCWNSMIDGYARHGRMDEARVLFEEMPERNVISWSIVIDGYVRFGEPNEALEFFQR 300
Query: 217 -----IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
IKP V + ACA+LGA+ QG W+H++L + +V TA+IDMY KCG
Sbjct: 301 MLSCGIKPDRVAAVGAVAACAQLGALEQGRWLHSYLEKKKVLFDVVVQTALIDMYVKCGR 360
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ A +F ++PKK + WN M+ GL +GY +AIKLF+ +++ D +S +AVLT+
Sbjct: 361 LDLAKLIFESMPKKSVVTWNVMIVGLGTHGYGLDAIKLFNQMETERAPMDDLSVLAVLTS 420
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H+G V++ F M + ++P ++HY ++D LGRAG +++A I +MP +P
Sbjct: 421 CTHAGLVSEGLGIFYRMEKDLGLEPKVEHYGALIDLLGRAGRVDQARNTIETMPMEPTPE 480
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+WGSLL++CR H +E+A+ + +++ L ++S YVL+SN+YA +++ R LM
Sbjct: 481 LWGSLLASCRSHRCVELAELSVERLASLGADDSGVYVLLSNIYADEGMWDDVFRIRKLMS 540
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
++K G S+IEVDG++HEFV GG HP E+YL L +L
Sbjct: 541 AEGMKKNIGRSVIEVDGQIHEFVNGGSSHPHKEEIYLTLWNL 582
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H++L K + D + + ++ G ++ A L+F + K ++ WN +I G
Sbjct: 330 RWLHSYLEKKKVLFDVVVQTALIDMYVK-CGRLDLAKLIFESMPKKSVVTWNVMIVGLGT 388
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQ 123
+AI LF + + T L+ ++ + GL +G + R+ K GLE
Sbjct: 389 HGYGLDAIKLF-NQMETERAPMDDLSVLAVLTSCTHAGLVSEGLGIFYRMEKDLGLEPKV 447
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
+ +I + G + +AR + + E W S+ LA C
Sbjct: 448 EHYGALIDLLGRAGRVDQARNTIETMPMEPTPELWGSL---LASC 489
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 275/488 (56%), Gaps = 34/488 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ LK++H + I+ G D + A+ +A + G + A VF ++ + WN +I
Sbjct: 252 LRSLKELHGYSIRHGFQYDELVANGFVA-AYAKCGMLICAERVFYSMETKTVNSWNALIG 310
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G +Q+ PR A+ L+I M S + P T SL A A L R G ++HG V++ GLE
Sbjct: 311 GCAQNGDPRKALNLYIQM-TYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLE 369
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D FI +++ +Y +CG S ARL LFD
Sbjct: 370 IDSFIGISLLSLYIHCGESSSARL--------------------------------LFDG 397
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +++VSWN+MISGY +N ++AL LFR++ +PS+ +VS+L AC++ A+R G
Sbjct: 398 MEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLG 457
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ H + + + V + IDMY K GC + + VF+ + K L+ WN+++ ++
Sbjct: 458 KETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVH 517
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G E+I+LF ++ PD +FI +LT C+H+G V + YF M + I+P ++H
Sbjct: 518 GDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEH 577
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+C++D LGRAG L++A +L+ MP PD+ +W SLLS CR G +E+ + A++++EL+
Sbjct: 578 YACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELE 637
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
YV +SNLYA S ++++ R ++K++ ++K+ GCS IE+ G+VH FVAG L
Sbjct: 638 PKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLL 697
Query: 481 PKAPEVYL 488
P++ E+ +
Sbjct: 698 PQSKEMSM 705
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 227/484 (46%), Gaps = 91/484 (18%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH +IK GL D + ++A G ++ A VF + NL WN+II GFS++
Sbjct: 53 IHGMVIKMGLLLDVFVGNALIAM-YGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENG 111
Query: 67 TPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
++ + ++M+ + P T ++ A+ + G ++HG VK GL D +
Sbjct: 112 FSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRV 171
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+N+++ MY+ CG+L+EA+++FD+ + + + V+WN+MI GL
Sbjct: 172 NNSLVDMYSKCGYLTEAQMLFDKNNRK-NAVSWNTMIGGLCT------------------ 212
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
GY+ EA LFREMQ +++I+ +E T++++L AC ++ +R + +H
Sbjct: 213 --------KGYIF-----EAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELH 259
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCG---CPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+ + + F+ + +V + Y KCG C ER VF ++ K ++ WN+++ G A NG
Sbjct: 260 GYSIRHGFQYDELVANGFVAAYAKCGMLICAER---VFYSMETKTVNSWNALIGGCAQNG 316
Query: 302 YENEAIKLFSGLQSSNLKPDYISF-----------------------------------I 326
+A+ L+ + S L PD+ + I
Sbjct: 317 DPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGI 376
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
++L+ H G+ + A+ F M E K S+ ++ M+ + GL E+A L R + S
Sbjct: 377 SLLSLYIHCGESSSARLLFDGMEE----KSSVS-WNAMISGYSQNGLPEDALILFRKLVS 431
Query: 387 D---PDAIIWGSLLSACRKHGNIEMAKQ----AAKQIIELDKNESCGYVLMSNLYAASYQ 439
D P I S+L AC + + + K+ A K ++ D +C + ++YA S
Sbjct: 432 DGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTI---DMYAKSGC 488
Query: 440 FEEA 443
+E+
Sbjct: 489 IKES 492
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 189/409 (46%), Gaps = 52/409 (12%)
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD-GAQLHGRVVKQGLEFDQFIHNT 128
+AI +F+ ++ + T+P + KA L R G +HG V+K GL D F+ N
Sbjct: 13 DAIDMFVKLITDTEFNADNFTFPCVIKACTG-SLDRGLGEVIHGMVIKMGLLLDVFVGNA 71
Query: 129 IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS 188
+I MY GF+ A +F + ++V+WNS+I G ++ G S+ FD +V
Sbjct: 72 LIAMYGKFGFVDAAVKVFHYMPVR-NLVSWNSIISGFSENG---FSKDCFDMLV------ 121
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
M++G E+ + P T+V++L CA+ ++ G IH V
Sbjct: 122 --EMMAG------------------EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAV 161
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
+ V +++DMY KCG A +F+ +K WN+M+ GL GY EA
Sbjct: 162 KLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFN 221
Query: 309 LFSGLQ-SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH----YSC 363
LF +Q +++ + ++ + +L AC ++ K+ Y I+ ++ +
Sbjct: 222 LFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKE-----LHGYSIRHGFQYDELVANG 276
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
V A + G+L AE++ SM + W +L+ C ++G+ ++A I++ +
Sbjct: 277 FVAAYAKCGMLICAERVFYSMETKT-VNSWNALIGGCAQNGD---PRKALNLYIQMTYSG 332
Query: 424 ------SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
+ G +L+++ + S ++ + + +L ++I+ G SL+ +
Sbjct: 333 LVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSL 381
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 5/212 (2%)
Query: 198 RNVKFKEALELF-REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
RN + +A+++F + + + FT ++ AC GE IH ++ L+
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
V A+I MY K G + A++VF+ +P + L WNS++ G + NG+ + + + +
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126
Query: 317 --NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
L PD + + VL C V L + + ++ + +VD + G L
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVK-LGLSEDVRVNNSLVDMYSKCGYL 185
Query: 375 EEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI 406
EA+ L + +A+ W +++ G I
Sbjct: 186 TEAQMLFDK-NNRKNAVSWNTMIGGLCTKGYI 216
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 291/521 (55%), Gaps = 39/521 (7%)
Query: 16 LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLF 75
+ K + + L + G + ++VF Q+ + +NT+I F+ + A+ +
Sbjct: 84 MTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVL 143
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
+ M QP + ++ + +A +QL R G Q+HGR+V L + F+ N + MYA
Sbjct: 144 VRMQ-EDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAK 202
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK---------------------------- 167
CG + +ARL+FD + + +VV+WN MI G K
Sbjct: 203 CGDIDKARLLFDGM-IDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSN 261
Query: 168 -------CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS 220
CG +D++R LF K+ ++ + W +MI GY +N + ++A LF +M +N+KP
Sbjct: 262 VLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPD 321
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
+T+ S++++CAKL ++ G+ +H +V + + +V +A++DMYCKCG A +F
Sbjct: 322 SYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFE 381
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
T+P + + WN+M+ G A NG EA+ L+ +Q N KPD I+F+ VL+AC ++ V +
Sbjct: 382 TMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKE 441
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSAC 400
+ YF ++E + I P++ HY+CM+ LGR+G +++A LI+ MP +P+ IW +LLS C
Sbjct: 442 GQKYFDSISE-HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVC 500
Query: 401 RKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPG 460
K G+++ A+ AA + ELD + Y+++SNLYAA ++++ R LMKE +K
Sbjct: 501 AK-GDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAA 559
Query: 461 CSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
S +EV +VH FV+ HP+ ++Y LN L ++Q++G
Sbjct: 560 YSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIG 600
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 178/332 (53%), Gaps = 22/332 (6%)
Query: 95 FKAYAQLGL--ARDGAQLHGRVVKQGLEF------DQFIHNTIIYMYANCGFLSEARLMF 146
F Y +L L AR + + ++ +E D FIHN ++++YA G LS+A+ +F
Sbjct: 22 FDDYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVF 81
Query: 147 DEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEAL 206
D + T+ DV +WN+++ AK G ++ +FD+M R++VS+N++I+ + N +AL
Sbjct: 82 DNM-TKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKAL 140
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
++ MQE +P++++ V+ L AC++L +R G+ IH +V NT V A+ DMY
Sbjct: 141 KVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMY 200
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG ++A +F+ + K + WN M+ G G NE I LF+ +Q S LKPD ++
Sbjct: 201 AKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVS 260
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM-- 384
VL A G+V+ A++ F + + +I ++ M+ + G E+A L M
Sbjct: 261 NVLNAYFRCGRVDDARNLFIKLPKKDEIC-----WTTMIVGYAQNGREEDAWMLFGDMLR 315
Query: 385 -PSDPDAIIWGSLLSACRK-----HGNIEMAK 410
PD+ S++S+C K HG + K
Sbjct: 316 RNVKPDSYTISSMVSSCAKLASLYHGQVVHGK 347
>gi|326506208|dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 582
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 256/428 (59%), Gaps = 4/428 (0%)
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
P A+ LF D L+ S P + Y A+ AQLHG K+G + + N
Sbjct: 56 PHLALRLF-DHLLRSGADPDPIAYALALARCARERAYPAAAQLHGHAAKRGAASHRRVRN 114
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
+I+ Y+ CG L +AR +FD E D++AWN ++ G A+ + R F +M +R++V
Sbjct: 115 GLIHAYSVCGMLFDARKVFDH-GPEVDMIAWNCLLRGYAQGRDTGALREFFAQMPARDSV 173
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQN-IKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
SWN++I+ V N + +EA+ +FREM N +P T+VS+++A A LGA+ QG W H +
Sbjct: 174 SWNTVIAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSVISAIAYLGALAQGLWAHAY 233
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVF-NTVPKKGLSCWNSMVFGLAMNGYENE 305
+ E++ + +A+I+MY KCG E A+ VF N+ + + WN+M+ G +G
Sbjct: 234 VCRKEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLAGFTASGCSER 293
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A++LF+ ++SS P+ I+F +L AC+H G V + YF MT + I+P I HY CMV
Sbjct: 294 ALELFTRMESSGFVPNKITFNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYGCMV 353
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D RAGL E+AE++I+ MP +PDA +W +L+ ACR + N E+ K+A ++IE N+
Sbjct: 354 DLFCRAGLFEKAEEMIQMMPMEPDAAVWKALVGACRTYSNFELGKKAGHRLIEAAPNDHA 413
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
GYVL+SN+YA ++ + R LM ++K PG S IE+DG +HEF++G + H + +
Sbjct: 414 GYVLLSNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSIELDGVIHEFISGDKSHSRKRD 473
Query: 486 VYLLLNDL 493
VY +L+++
Sbjct: 474 VYEMLSEI 481
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 111/253 (43%), Gaps = 33/253 (13%)
Query: 44 FTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGL 103
F Q+ + WNT+I + A+ +F +ML ++ QP R+T S+ A A LG
Sbjct: 164 FAQMPARDSVSWNTVIAWCVANGEHEEAVAVFREMLASNECQPDRVTLVSVISAIAYLGA 223
Query: 104 ARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMII 163
G H V ++ +E D+ + + +I MY+ CGF+ A +F+ V WN+M+
Sbjct: 224 LAQGLWAHAYVCRKEIEVDEKLSSALINMYSKCGFIEGAVYVFENSCALRSVDTWNAMLA 283
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFT 223
G G + ALELF M+ P++ T
Sbjct: 284 GFTASGCSE-------------------------------RALELFTRMESSGFVPNKIT 312
Query: 224 MVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
+LLNAC+ G + +G + ++ E + ++D++C+ G E+A ++ +
Sbjct: 313 FNTLLNACSHGGFVEEGIGYFERMTNSSSIEPDIAHYGCMVDLFCRAGLFEKAEEMIQMM 372
Query: 283 P-KKGLSCWNSMV 294
P + + W ++V
Sbjct: 373 PMEPDAAVWKALV 385
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 168/459 (36%), Positives = 268/459 (58%), Gaps = 3/459 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+ A V ++ + N W T++ Q + A+ L+ ML +P + S+
Sbjct: 326 GDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADG-CRPNISCFSSV 384
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A A L R G ++H + +K + F+ + +I MY C L +A+++F + + +
Sbjct: 385 LGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK-N 443
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+V WNS+I G + ++ E+ LF KM +RN SWNS+ISGY +N +F +AL+ F M
Sbjct: 444 IVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLA 503
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
P E T S+L ACA L ++ G+ +H ++ + + V TA+ DMY K G +
Sbjct: 504 SGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDS 563
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
+ +VF +PK+ W +M+ GLA NG+ E+I LF + S+ + P+ +F+A+L AC+H
Sbjct: 564 SKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
SG V A YF +M + I P KHY+CMVD L RAG L EAE L+ + S +A W
Sbjct: 624 SGLVEHAMHYFEMM-QACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWA 682
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
+LLSAC + N EM ++AAK++ ELDK+ + GYVL+SN+YA+ ++++A E R+LMK +
Sbjct: 683 ALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGIN 742
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
++K+ GCS +++ G+ F + HP P+VY +L+ L
Sbjct: 743 LKKDGGCSWVQIRGQYQAFFSWETKHPLLPDVYEMLDLL 781
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 195/405 (48%), Gaps = 36/405 (8%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A ++ Q ++ + +I GF + P++A+ +F +ML + + P +T S+
Sbjct: 193 GSVRDAVELYRQCPLCSVPFFTAMIAGFVLNELPKDALGVFHEML-SCGVSPNEITLVSV 251
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
KA G + G +K L + + + N++I +Y G AR MFDE++
Sbjct: 252 IKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVR- 310
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
DVV+W +++ A+ G+++ +RR+ D+M RN VSW ++++ + + KEA+ L+ +M
Sbjct: 311 DVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQML 370
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+P+ S+L ACA L +R G IHN + N V +A+IDMYCKC
Sbjct: 371 ADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLP 430
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMN--------------------------GYEN--- 304
A +F ++P+K + CWNS++ G + N GY
Sbjct: 431 DAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQ 490
Query: 305 --EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+A+K F + +S P I+F +VL AC + K + + IK SI +
Sbjct: 491 FIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIK-LGIKESIFVGT 549
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ D ++G L+ ++++ MP D + W +++ ++G E
Sbjct: 550 ALSDMYAKSGDLDSSKRVFYEMPKRND-VAWTAMIQGLAENGFAE 593
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 166/356 (46%), Gaps = 42/356 (11%)
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F ++ ++ + G + AR +FD + E VV++ +M+ L K G + ++ L+ +
Sbjct: 149 FAYDFMVREHVKAGDIVSARRLFDGM-PERSVVSYTTMVDALMKRGSVRDAVELYRQCPL 207
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA------- 236
+ + +MI+G+V N K+AL +F EM + P+E T+VS++ AC G
Sbjct: 208 CSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSI 267
Query: 237 ---------IRQGEWIHNFLVT---------------NCFELNTIVV-TAIIDMYCKCGC 271
+ + + N L+T + E+ +V TA++D+Y + G
Sbjct: 268 VGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGD 327
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
E A +V + +P++ W ++V G EA+ L+S + + +P+ F +VL A
Sbjct: 328 LEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGA 387
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLEEAEKLIRSMPSDPD 389
C + + + +T K+ S + S ++D + L +A+ + S+P +
Sbjct: 388 C---ASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQK-N 443
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+ W SL+S + + A++ K++ +N + ++S YA + QF +A++
Sbjct: 444 IVCWNSLISGYSNNSKMVEAEELFKKMPA--RNVASWNSIISG-YAQNRQFIDALK 496
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 107/217 (49%), Gaps = 5/217 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +HA +IK G+ K+ I L+ + +GD++ + VF ++ K N W +I+G ++
Sbjct: 530 KMVHAKIIKLGI-KESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAE 588
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ +ILLF DM +++ I P T+ ++ A + GL + G+
Sbjct: 589 NGFAEESILLFEDM-ISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMMQACGISPKAK 647
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI--IGLAKCGEIDE-SRRLFDKM 181
+ ++ + A G L+EA + +++++ + +W +++ + + E+ E + + ++
Sbjct: 648 HYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQEL 707
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
NT + + + Y K+K+A E+ M+ N+K
Sbjct: 708 DKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGINLK 744
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 276/497 (55%), Gaps = 35/497 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H + IK K+ + + L S +G++N A VF + + ++ W ++I G+++
Sbjct: 271 RALHGYAIKASFGKE-LTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAR 329
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ LF +M I P T ++ A A GL +G +H + + ++ D F
Sbjct: 330 EGLSDMSVRLFHEM-EKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLF 388
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MYA KCG + ++ +F +M +
Sbjct: 389 VSNALMDMYA--------------------------------KCGSMGDAHSVFSEMQVK 416
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSWN+MI GY +N EAL LF EMQ N KP+ TM +L ACA L A+ +G+ IH
Sbjct: 417 DIVSWNTMIGGYSKNSLPNEALNLFVEMQ-YNSKPNSITMACILPACASLAALERGQEIH 475
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N F L+ V A++DMY KCG A +F+ +P+K L W M+ G M+GY +
Sbjct: 476 GHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGS 535
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EAI F+ +++S ++PD +SFI++L AC+HSG +++ +F +M I+P +HY+C+
Sbjct: 536 EAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACI 595
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD L RAG L +A K I+ MP +PDA IWG+LL CR + ++++A++ A+ + EL+ +
Sbjct: 596 VDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENT 655
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL++N+YA + ++EE + R + + K PGCS IE+ G+VH FV G HP A
Sbjct: 656 GYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLAN 715
Query: 485 EVYLLLNDLGLLIQEMG 501
++ LLL ++E G
Sbjct: 716 KIELLLKKTRTRMKEEG 732
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 203/439 (46%), Gaps = 34/439 (7%)
Query: 17 AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFI 76
+K P+ +S + C + + + + +I N+ I F + R A+
Sbjct: 38 SKTPLVSSNLYHSCATIGTSVLPSETIDCKITDYNIEICR-----FCELGNLRRAM---- 88
Query: 77 DMLVTSPIQPQRL-TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
+++ SP L TY S+ + A L +DG ++H + +E D + + +++MY
Sbjct: 89 ELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVT 148
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES------------------RRL 177
CG L E R +FD+V E V WN ++ G AK G ES R+L
Sbjct: 149 CGDLREGRRIFDKVANE-KVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKL 207
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD++ R+ +SWNSMISGYV N ++ L+LF +M I TMVS++ C+ G +
Sbjct: 208 FDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGML 267
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G +H + + F + ++DMY K G A+QVF T+ ++ + W SM+ G
Sbjct: 268 LLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGY 327
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A G + +++LF ++ + PD + +L AC +G + KD + E K++
Sbjct: 328 AREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKEN-KMQSD 386
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
+ + ++D + G + +A + M D + W +++ K+ + +A +
Sbjct: 387 LFVSNALMDMYAKCGSMGDAHSVFSEMQV-KDIVSWNTMIGGYSKN---SLPNEALNLFV 442
Query: 418 ELDKNESCGYVLMSNLYAA 436
E+ N + M+ + A
Sbjct: 443 EMQYNSKPNSITMACILPA 461
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 161/474 (33%), Positives = 276/474 (58%), Gaps = 35/474 (7%)
Query: 4 LKKIHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+IH + ++ G + D + A+ +A + G ++YA VF ++ + WN +I G
Sbjct: 419 LKEIHGYALRHGFIQSDELVANAFVA-GYAKCGSLHYAEGVFCGMESKMVSSWNALIGGH 477
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
Q+ PR A+ L++ ++ S ++P T SL A A+L G ++HG +++ G E D
Sbjct: 478 VQNGFPRKALDLYL-LMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELD 536
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+FI +++ +Y CG + A+L FD M
Sbjct: 537 EFICISLVSLYVQCGKILLAKL--------------------------------FFDNME 564
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+N V WN+MI+G+ +N +AL++F +M I P E +++ L AC+++ A+R G+
Sbjct: 565 EKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKE 624
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H F V + ++ V ++IDMY KCGC E++ +F+ V KG WN ++ G ++G+
Sbjct: 625 LHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGH 684
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+AI+LF +Q++ +PD ++FIA+LTACNH+G V + +Y M + IKP ++HY+
Sbjct: 685 GRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYA 744
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C+VD LGRAG L EA +L+ +P PD+ IW SLLS+CR + ++++ ++ A +++EL +
Sbjct: 745 CVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPD 804
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
++ YVL+SN YA +++E + R MKE+ ++K+ GCS IE+ G+V F+ G
Sbjct: 805 KAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVG 858
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 159/329 (48%), Gaps = 37/329 (11%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H +KT + D + ++A G + A VF ++ + NL WN+++ ++
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAM-YGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENG 276
Query: 67 TPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ LF +L + P T ++ A+ G R G HG +K GL + +
Sbjct: 277 VFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKV 336
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+++++ MY+ CG+L EAR++FD E +V++WNSM
Sbjct: 337 NSSLLDMYSKCGYLCEARVLFDT--NEKNVISWNSM------------------------ 370
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
I GY ++ F+ A EL R+MQ E +K +E T++++L C + + + IH
Sbjct: 371 -------IGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIH 423
Query: 245 NFLVTNCF-ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
+ + + F + + +V A + Y KCG A VF + K +S WN+++ G NG+
Sbjct: 424 GYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFP 483
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
+A+ L+ ++ S L+PD + ++L+AC
Sbjct: 484 RKALDLYLLMRGSGLEPDLFTIASLLSAC 512
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 213/501 (42%), Gaps = 99/501 (19%)
Query: 5 KKIHAHLIKTG--LAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+KIH + I T D + +R++ + C SP + LVF ++ NLF+WN ++
Sbjct: 113 RKIH-NFISTSPHFQNDVVLITRLVTMYSICDSPYD----SCLVFNASRRKNLFLWNALL 167
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G+ ++S R+A+ +F++M+ + P T P + KA + R G +HG +K +
Sbjct: 168 SGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKV 227
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F+ N +I MY GF+ A +FD++ ++V+WNS++ + G +ES LF
Sbjct: 228 LSDVFVGNALIAMYGKFGFVESAVKVFDKMPQR-NLVSWNSVMYACLENGVFEESYGLFK 286
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+++ ++ + P TMV+++ CA+ G +R
Sbjct: 287 GLLN-----------------------------GDEGLMPDVATMVTVIPLCARQGEVRL 317
Query: 240 GEWIHNFLVT--NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G H + C EL V ++++DMY KCG A +F+T K +S WNSM+ G
Sbjct: 318 GMVFHGLALKLGLCGELK--VNSSLLDMYSKCGYLCEARVLFDTNEKNVIS-WNSMIGGY 374
Query: 298 AMNGYENEAIKLFSGLQSSN-LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
+ + A +L +Q + +K + ++ + VL C + + K+ I+
Sbjct: 375 SKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQS 434
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPS------------------------------ 386
+ V + G L AE + M S
Sbjct: 435 DELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMR 494
Query: 387 ----DPDAIIWGSLLSACRKHGNIEMAKQAAKQII----ELDK---------NESCGYVL 429
+PD SLLSAC + ++ K+ ++ ELD+ CG +L
Sbjct: 495 GSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKIL 554
Query: 430 MSNLYAASYQFEEAMEERLLM 450
++ L F + MEE+ L+
Sbjct: 555 LAKL------FFDNMEEKNLV 569
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 9/214 (4%)
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN-CFELNTIVVTAIIDMYCKCG 270
+ N KP + + LL C + I G IHNF+ T+ F+ + +++T ++ MY C
Sbjct: 85 VSSSNSKPKQLIGL-LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICD 143
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVL 329
P + VFN +K L WN+++ G N +A+ +F + S + PD + V+
Sbjct: 144 SPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVI 203
Query: 330 TAC--NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
AC + ++ +A F L T K+ + + ++ G+ G +E A K+ MP
Sbjct: 204 KACVGVYDVRLGEAVHGFALKT---KVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQR 260
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+ + W S++ AC ++G E + K ++ D+
Sbjct: 261 -NLVSWNSVMYACLENGVFEESYGLFKGLLNGDE 293
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 290/505 (57%), Gaps = 17/505 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HAH +K L +P + ++ S G++++A LVF + + + +I G+
Sbjct: 151 KQLHAHALKLALHFNPHVHTSVIHMYAS-VGEMDFARLVFDKSSLRDAVSFTALITGYVS 209
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+A LF ++ V + ++ ++ Y Q G + + + + ++
Sbjct: 210 QGCLDDARRLFDEIPVKDVV-----SWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNK- 263
Query: 125 IHNTIIYMYANCGFLSEARL---MFDEV-DTEF--DVVAWNSMIIGLAKCGEIDESRRLF 178
+T++ + + CG L + V D F ++ N++I KCGE D +R LF
Sbjct: 264 --STMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELF 321
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D + ++ +SWN+MI GY ++EAL LF M N+KP++ T + +L+ACA LGA+
Sbjct: 322 DGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALD 381
Query: 239 QGEWIHNFLVTNCF-ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
G+W+H ++ N N + T++IDMY KCGC E A +VF ++ + L+ WN+M+ G
Sbjct: 382 LGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGF 441
Query: 298 AMNGYENEAIKLFSGLQSSNL-KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
AM+G+ A+ LFS + + L +PD I+F+ VL+AC +G V+ YF M + Y I P
Sbjct: 442 AMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISP 501
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++HY CM+D L RA EEAE L+++M +PD IWGSLLSAC+ HG +E + A+++
Sbjct: 502 KLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERL 561
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+L+ + +VL+SN+YA + ++++ R + + ++K PGC+ IE+DG+VHEF+ G
Sbjct: 562 FQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVG 621
Query: 477 GRLHPKAPEVYLLLNDLGLLIQEMG 501
+ HP+ +Y +LN++ L++E G
Sbjct: 622 DKFHPECNNIYKMLNEVDKLLEENG 646
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 297/541 (54%), Gaps = 57/541 (10%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVF---TQIKKPNLFIWNTII 59
K+IH+ +IKTGL S+++ FC SP+GD++YA +F Q K N+FIWN++I
Sbjct: 44 FKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLI 103
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S SS+P +++ LF ML +QP T+P LFK+ + +G QLH +K L
Sbjct: 104 RGYSLSSSPLSSLHLFSRMLYYG-VQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLAL 162
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
F+ +H ++I+MYA+ G + ARL+FD+ D V++ ++I G G +D++RRLFD
Sbjct: 163 HFNPHVHTSVIHMYASVGEMDFARLVFDKSSLR-DAVSFTALITGYVSQGCLDDARRLFD 221
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
++ ++ VSWN+MISGYV++ +F+EA+ F EMQE N+ P++ TMV +L+AC +
Sbjct: 222 EIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGEL 281
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+WI +++ N F N + A+IDMYCKCG + A ++F+ + +K + WN+M+ G +
Sbjct: 282 GKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSY 341
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
EA+ LF + SN+KP+ ++F+ +L AC G ++ K + + + +
Sbjct: 342 LSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNAS 401
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPS--------------------------------- 386
++ ++D + G +E AE++ RSM S
Sbjct: 402 LWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKG 461
Query: 387 --DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC---GYVLMSNLYAASYQFE 441
PD I + +LSAC + G +++ Q + +I+ D S Y M +L A + +FE
Sbjct: 462 LFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQ-DYGISPKLQHYGCMIDLLARAEKFE 520
Query: 442 EAMEERLLMKEVKIEKEPGC-----SLIEVDGEVH--EFVAGG--RLHPKAPEVYLLLND 492
EA +LMK +++E + S + G V E+VA +L P+ ++LL++
Sbjct: 521 EA---EILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSN 577
Query: 493 L 493
+
Sbjct: 578 I 578
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 282/497 (56%), Gaps = 35/497 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA L + G+A + A++++ F S + A+ +F +I K NLF+WN +IR ++
Sbjct: 78 KQLHARLCQLGIAYNLDLATKLVNF-YSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAW 136
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ AI L+ ML ++P T P + KA + L +G +H RV++ G E D F
Sbjct: 137 NGPHETAISLYHQMLEYG-LKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVF 195
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA KCG + ++R +FDK+V R
Sbjct: 196 VGAALVDMYA--------------------------------KCGCVVDARHVFDKIVDR 223
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V WNSM++ Y +N E+L L EM + ++P+E T+V+++++ A + + G IH
Sbjct: 224 DAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIH 283
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
F + F+ N V TA+IDMY KCG + A +F + +K + WN+++ G AM+G
Sbjct: 284 GFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAV 343
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+ LF + +PD+I+F+ L AC+ +++ + + LM +I P+++HY+CM
Sbjct: 344 EALDLFERMMK-EAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCM 402
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LG G L+EA LIR M PD+ +WG+LL++C+ HGN+E+A+ A +++IEL+ ++S
Sbjct: 403 VDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDS 462
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YV+++N+YA S ++E R LM + I+K CS IEV +V+ F++G HP +
Sbjct: 463 GNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSG 522
Query: 485 EVYLLLNDLGLLIQEMG 501
+Y L L L++E G
Sbjct: 523 AIYAELKRLEGLMREAG 539
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 141/334 (42%), Gaps = 46/334 (13%)
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
+D +SP Y SL ++ G QLH R+ + G+ ++ + ++ Y+
Sbjct: 48 VDSFPSSP--SNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSV 105
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
C L A +F DK+ N WN +I
Sbjct: 106 CNSLRNAHHLF--------------------------------DKIPKGNLFLWNVLIRA 133
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN 255
Y N + A+ L+ +M E +KP FT+ +L AC+ L I +G IH ++ + +E +
Sbjct: 134 YAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERD 193
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
V A++DMY KCGC A VF+ + + WNSM+ A NG+ +E++ L + +
Sbjct: 194 VFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAA 253
Query: 316 SNLKPDYISFIAVLT-----ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGR 370
++P + + V++ AC G+ + K+K + ++D +
Sbjct: 254 KGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVK------TALIDMYAK 307
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
G ++ A L + + + W ++++ HG
Sbjct: 308 CGSVKVACVLFERL-REKRVVSWNAIITGYAMHG 340
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 2/186 (1%)
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
+ + SLL +C A+ G+ +H L N + T +++ Y C A +F
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+ +PK L WN ++ A NG AI L+ + LKPD + VL AC+ +
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ + + + + + + +VD + G + +A + + D DA++W S+L+A
Sbjct: 177 EGRVIHERVIRS-GWERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDAVLWNSMLAA 234
Query: 400 CRKHGN 405
++G+
Sbjct: 235 YAQNGH 240
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 164/457 (35%), Positives = 269/457 (58%), Gaps = 6/457 (1%)
Query: 49 KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA 108
+ N+ WN I+ GF++S + A+++F + P ++T S+ + + G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMF-QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
+HG V+KQGL D+ + + +I MY G + +F++ + + N+ I GL++
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM-MEAGVCNAYITGLSRN 331
Query: 169 GEIDESRRLFD----KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
G +D++ +F+ + + N VSW S+I+G +N K EALELFREMQ +KP+ T+
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
S+L AC + A+ G H F V N V +A+IDMY KCG + VFN +P
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
K L CWNS++ G +M+G E + +F L + LKPD+ISF ++L+AC G ++ Y
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
F +M+E Y IKP ++HYSCMV+ LGRAG L+EA LI+ MP +PD+ +WG+LL++CR
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 405 NIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
N+++A+ AA+++ L+ YVL+SN+YAA + E R M+ + ++K PGCS I
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Query: 465 EVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+V V+ +AG + HP+ ++ ++++ +++ G
Sbjct: 632 QVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 209/436 (47%), Gaps = 44/436 (10%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
HA ++K+G D +++++A S N A LV I P ++ ++++I +++
Sbjct: 38 HARILKSGAQNDGYISAKLIA-SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKL 96
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
+I +F M I P P+LFK A+L + G Q+H GL+ D F+
Sbjct: 97 FTQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM----VS 183
++ +MY CG + +AR +FD + ++ DVV ++++ A+ G ++E R+ +M +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRM-SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N VSWN ++SG+ R+ KEA+ +F+++ P + T+ S+L + + G I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKC-------------------------------GCP 272
H +++ + V++A+IDMY K G
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 273 ERALQVFNTVPKKGLS----CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
++AL++F ++ + W S++ G A NG + EA++LF +Q + +KP++++ ++
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC + + + + + ++ S ++D + G + ++ + MP+
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTK- 452
Query: 389 DAIIWGSLLSACRKHG 404
+ + W SL++ HG
Sbjct: 453 NLVCWNSLMNGFSMHG 468
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 32/234 (13%)
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
Q H R++K G + D +I +I Y+N ++A L+ + + + +++S+I L K
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSI-PDPTIYSFSSLIYALTK 93
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
+S +F +M S + P + +L
Sbjct: 94 AKLFTQSIGVFSRMFSHGLI-------------------------------PDSHVLPNL 122
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
CA+L A + G+ IH + +++ V ++ MY +CG A +VF+ + K +
Sbjct: 123 FKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
++++ A G E +++ S ++SS ++ + +S+ +L+ N SG +A
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEA 236
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ H ++ L D + L + G IN + +VF + NL WN+++ GFS
Sbjct: 408 RSTHGFAVRVHLL-DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSM 466
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQ 123
+ + +F + L+ + ++P +++ SL A Q+GL +G + + ++ G++
Sbjct: 467 HGKAKEVMSIF-ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRL 525
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
++ ++ + G L EA + E+ E D W +++
Sbjct: 526 EHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 225/350 (64%)
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
E +V+ +MI AK G IDE+R LFD + R+ + WN MI GY ++ E L LFR+
Sbjct: 3 EKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQ 62
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M ++P+E T++++L+AC + GA+ G W+H+++ N +N V T++IDMY KCG
Sbjct: 63 MLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGS 122
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
E A VF + K + WNSMV G AM+G+ +A++LF + +P I+FI VL A
Sbjct: 123 LEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNA 182
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C+H+G V++ +F M + Y I+P ++HY CMV+ LGRAG LEEA +L+++M D D +
Sbjct: 183 CSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPV 242
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+WG+LL ACR HGNI + +Q A+ ++ + S YVL+SN+YAA+ +E R LMK
Sbjct: 243 LWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMK 302
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
E EKEPGCS IEV+ +VHEF+AG HPK+ E+Y +L ++ ++ G
Sbjct: 303 ESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHG 352
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 33/211 (15%)
Query: 30 CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRL 89
C + G I+ A ++F +++ + WN +I G++Q P +LLF ML + ++P +
Sbjct: 15 CYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQML-NAKVRPNEV 73
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T ++ A Q G G +H + G+ + + ++I MY+ CG L +ARL+F+ +
Sbjct: 74 TVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERI 133
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
+ DVVAWNSM++G A G F ++AL LF
Sbjct: 134 SNK-DVVAWNSMVVGYAMHG--------FS-----------------------QDALRLF 161
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+EM +P++ T + +LNAC+ G + +G
Sbjct: 162 KEMCMIGYQPTDITFIGVLNACSHAGLVSEG 192
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 86/180 (47%), Gaps = 3/180 (1%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H+++ G+ + + ++ S G + A LVF +I ++ WN+++ G++
Sbjct: 94 VHSYIENNGIGINVRVGTSLIDM-YSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHG 152
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQFI 125
++A+ LF +M + QP +T+ + A + GL +G + + + G+E
Sbjct: 153 FSQDALRLFKEMCMIG-YQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEH 211
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ ++ + G+L EA + ++ + D V W +++ G I ++ + +VS+N
Sbjct: 212 YGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQN 271
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 262/451 (58%), Gaps = 6/451 (1%)
Query: 44 FTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGL 103
Q + W + I +++ A F DM + + ++P +T+ +L
Sbjct: 17 LNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRL-AGVEPNHITFIALLSGCGDFSS 75
Query: 104 ARD--GAQLHGRVVKQGLEFDQFIHNT-IIYMYANCGFLSEARLMFDEVDTEFDVVAWNS 160
+ G LHG K G + + T I+ MY+ + +ARL+FD ++ + + V WN+
Sbjct: 76 GSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDK-NSVTWNT 134
Query: 161 MIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS 220
MI G + G++D + ++FDKM R+ +SW +MI+G+V+ +EAL FREMQ +KP
Sbjct: 135 MIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPD 194
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
+++ LNAC LGA+ G W+H ++++ F+ N V ++ID+YC+CGC E A +VF+
Sbjct: 195 YVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFD 254
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
+ K+ + WNS++ G A NG +E++ F +Q KPD ++F LTAC+H G V +
Sbjct: 255 KMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEE 314
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSAC 400
YF M ++I P I+HY C+VD RAG LEEA K+++SMP P+ ++ GSLL+AC
Sbjct: 315 GLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAAC 374
Query: 401 RKHG-NIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP 459
R HG N +A++ K + +++ YV++SN+YAA ++E A + R MK + ++K+P
Sbjct: 375 RTHGNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQP 434
Query: 460 GCSLIEVDGEVHEFVAGGRLHPKAPEVYLLL 490
G S IE+D H F+AG H + ++ +L
Sbjct: 435 GFSSIEIDDCTHVFMAGDSAHVETADIREVL 465
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 120/310 (38%), Gaps = 63/310 (20%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K G + + + S + A LVF ++ N WNT+I G+ ++
Sbjct: 84 LHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMRNG 143
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
NA+ +F M + S ++P + +
Sbjct: 144 QVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALN 203
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A LG G +H V+ Q + + + N++I +Y CG + AR +FD+++ VV
Sbjct: 204 ACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKR-TVV 262
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G ES L FR+MQE+
Sbjct: 263 SWNSVIVGFAANGNAHES-------------------------------LVYFRKMQEEG 291
Query: 217 IKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
KP T L AC+ +G + +G + + ++D+Y + G E A
Sbjct: 292 FKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEA 351
Query: 276 LQVFNTVPKK 285
L+V ++P K
Sbjct: 352 LKVVQSMPMK 361
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+Q N + + W S + L NG EA K FS ++ + ++P++I+FIA+L+ C
Sbjct: 14 IQKLNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGC--- 70
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA--LGRAGLLEEAEK--LIRSMPSDPDAI 391
G + + + Y K MV LG +K L+ D +++
Sbjct: 71 GDFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSV 130
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
W +++ ++G ++ A K ++ + + + M N + EEA+
Sbjct: 131 TWNTMIDGYMRNGQVD---NAVKMFDKMPERDLISWTAMINGFVKKGFHEEAL 180
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 163/442 (36%), Positives = 261/442 (59%), Gaps = 6/442 (1%)
Query: 49 KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA 108
+ N+ WN I+ GF++S + A+++F + P ++T S+ + + G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMF-QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
+HG V+KQGL D+ + + +I MY G + +F++ + + N+ I GL++
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM-MEAGVCNAYITGLSRN 331
Query: 169 GEIDESRRLFD----KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
G +D++ +F+ + + N VSW S+I+G +N K EALELFREMQ +KP+ T+
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
S+L AC + A+ G H F V N V +A+IDMY KCG + VFN +P
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
K L CWNS++ G +M+G E + +F L + LKPD+ISF ++L+AC G ++ Y
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
F +M+E Y IKP ++HYSCMV+ LGRAG L+EA LI+ MP +PD+ +WG+LL++CR
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 405 NIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
N+++A+ AA+++ L+ YVL+SN+YAA + E R M+ + ++K PGCS I
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Query: 465 EVDGEVHEFVAGGRLHPKAPEV 486
+V V+ +AG + HP+ ++
Sbjct: 632 QVKNRVYTLLAGDKSHPQIDQI 653
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 209/436 (47%), Gaps = 44/436 (10%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
HA ++K+G D +++++A S N A LV I P ++ ++++I +++
Sbjct: 38 HARILKSGAQNDGYISAKLIA-SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKL 96
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
+I +F M I P P+LFK A+L + G Q+H GL+ D F+
Sbjct: 97 FTQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM----VS 183
++ +MY CG + +AR +FD + ++ DVV ++++ A+ G ++E R+ +M +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRM-SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N VSWN ++SG+ R+ KEA+ +F+++ P + T+ S+L + + G I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKC-------------------------------GCP 272
H +++ + V++A+IDMY K G
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 273 ERALQVFNTVPKKGLS----CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
++AL++F ++ + W S++ G A NG + EA++LF +Q + +KP++++ ++
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC + + + + + ++ S ++D + G + ++ + MP+
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTK- 452
Query: 389 DAIIWGSLLSACRKHG 404
+ + W SL++ HG
Sbjct: 453 NLVCWNSLMNGFSMHG 468
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 32/234 (13%)
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
Q H R++K G + D +I +I Y+N ++A L+ + + + +++S+I L K
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSI-PDPTIYSFSSLIYALTK 93
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
+S +F +M S + P + +L
Sbjct: 94 AKLFTQSIGVFSRMFSHGLI-------------------------------PDSHVLPNL 122
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
CA+L A + G+ IH + +++ V ++ MY +CG A +VF+ + K +
Sbjct: 123 FKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
++++ A G E +++ S ++SS ++ + +S+ +L+ N SG +A
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEA 236
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ H ++ L D + L + G IN + +VF + NL WN+++ GFS
Sbjct: 408 RSTHGFAVRVHLL-DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSM 466
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQ 123
+ + +F + L+ + ++P +++ SL A Q+GL +G + + ++ G++
Sbjct: 467 HGKAKEVMSIF-ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRL 525
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
++ ++ + G L EA + E+ E D W +++
Sbjct: 526 EHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 275/500 (55%), Gaps = 15/500 (3%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH L K GL L + G +A +F ++ P L + R + S
Sbjct: 33 IHGLLFKEGLLHAGSHLPTALLSAYAALGRPRHARDLFDEMPDPGLVTRTAMARAHAASG 92
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY------AQLGLA---RDGAQLHGRVVKQ 117
A+ +F DML + +L + A LG+A R G +H +V
Sbjct: 93 QTAQALAVFGDMLADGVLPDNVALAVALAACHGTGSFPAALGMAAARRPGKMVHALIVTS 152
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G+ D F+ +I +Y G L +R +FD + + V+WN+M+ + + ++ L
Sbjct: 153 GIVPDVFVSTELIRLYGEYGELLVSRRLFDAMPVK-STVSWNAMVHQYIRHSNVGDAYEL 211
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN---IKPSEFTMVSLLNACAKL 234
F M R+ VSWN++I+GY +F EALELFR+M + + P+ T+ ++L ACA
Sbjct: 212 FLAMPKRDVVSWNTIIAGYCLIGRFMEALELFRQMMSPSSCPVHPNGPTISTVLAACAGA 271
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSM 293
G + G W+H ++ N + + ++IDMY KCG E+ALQVF P K+ L W ++
Sbjct: 272 GCLETGIWVHAYIDRNRMNDDGSLDRSLIDMYAKCGSIEKALQVFEKAPGKRDLYSWTTV 331
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ GLAM+G +A+++F +Q + ++PD ++ + VL AC H G V++ +F + E Y
Sbjct: 332 ICGLAMHGKAADALRMFGMMQDNGIRPDDVTLVGVLNACAHGGLVDEGLHHFYSL-EKYA 390
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
I P I+HY C++D LGR G L+EA +IR+M P+A+IWG+ L+AC+ H N+E+ + AA
Sbjct: 391 ITPKIEHYGCVIDLLGRVGRLQEAYSIIRTMRMKPNAVIWGAFLNACKVHSNVELGEIAA 450
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
++ LD ++ V++S+LYA + + ER M ++++K PGCS IE+DGEVHEF
Sbjct: 451 AELTRLDPDDPWAKVMLSSLYAKAQDWSSLARERREMNSLQMKKTPGCSSIELDGEVHEF 510
Query: 474 VAGGRLHPKAPEVYLLLNDL 493
VAG HP+ E+ +L ++
Sbjct: 511 VAGSFQHPQHGEICTVLENV 530
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 271/484 (55%), Gaps = 39/484 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPA-GDINYAYLVFTQIKKPNLFIWNTII 59
M + K+HA L+KTG P+A R+L C + A ++YA +F I P+ F +NTII
Sbjct: 1 MNHIYKLHARLLKTGHHNHPLALRRLLLSCAASAPASLSYARSIFDLIAFPDTFAFNTII 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R + + + + L + + + P T+P + KA A+L + G LH + K G
Sbjct: 61 R--AHADSSPSFSLSLFSKMTMAGVSPDHFTFPFVLKACARL---QTGLDLHSLLFKLGF 115
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D ++ N +I+ Y CGF +D + + F+
Sbjct: 116 DSDVYVQNGLIHFYGCCGF--------------------------------LDFALKAFE 143
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIR 238
+M R+ VSW+SMI+ + +N EAL LF+ MQ +KP E ++S+++A + LG +
Sbjct: 144 EMPERDLVSWSSMIACFAKNGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLE 203
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+WI F+ N E + TA++DM+ +CGC E +++VF+ + ++ + W +++ GLA
Sbjct: 204 LGKWIRGFISRNGLEFTVSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLA 263
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G EA+++F +++ +PD+++F VL AC+H G V++ F + Y ++P
Sbjct: 264 VHGRSAEALRMFYEMRNHGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLP 323
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD LGRAGLL EA K + MP P++IIW +LL AC H IE+A++ ++I E
Sbjct: 324 EHYGCMVDLLGRAGLLNEACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINE 383
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD YVL+SN+Y ++ E R M+E +I K+PGCSLI V+ +HEFVAG
Sbjct: 384 LDSYHDGDYVLLSNVYGGVGRWAEKAGVRNSMREKRISKKPGCSLINVNHLIHEFVAGDN 443
Query: 479 LHPK 482
HP+
Sbjct: 444 NHPQ 447
>gi|224126363|ref|XP_002329535.1| predicted protein [Populus trichocarpa]
gi|222870244|gb|EEF07375.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 274/512 (53%), Gaps = 61/512 (11%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K +IH L GL + P AASR + + +++ ++ I++P+ F+ NTI+R
Sbjct: 71 IKQFNQIHTQLTVLGLFQHPFAASRYIKKLCACLNSVSHCVSLYNHIEEPDAFMCNTIMR 130
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
F + P A+ + + ++ + P T+P + K A +G R+G ++H VVK G E
Sbjct: 131 SFVNVNDPFGALRFYYEKMIAKWVLPNHYTFPLVAKVCADIGSLREGQKVHALVVKFGFE 190
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDE------------VDT----------------- 151
D F+ N+ I Y+ CG S+AR++FD +D
Sbjct: 191 LDLFVRNSFIRFYSVCGRTSDARMVFDNGFVLDLVSWNSMIDGYVKNGELGLAREIFDEM 250
Query: 152 -EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY-------------- 196
E D+ WNSMI G G+++ +R LFDKM SR+ VSWN MI G+
Sbjct: 251 YERDIFTWNSMISGYVGVGDMEAARGLFDKMPSRDVVSWNCMIDGFARIKDVSMAAKFFD 310
Query: 197 ---VRNV--------------KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+RNV K+ + L F M + P E ++VS+L ACA+L + Q
Sbjct: 311 EMPLRNVVSWNVMLALYLRCKKYSDCLRFFDMMVGGDFVPDEASLVSVLTACAELKMLDQ 370
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+W+H+++ N + + ++ TA++ MY KCG + A +VF+ +P+K + WNSM+ G +
Sbjct: 371 GKWVHSYMKDNGIKPDMLLSTALLTMYAKCGAMDLAREVFDKMPEKSVVSWNSMIIGYGI 430
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G+ ++A+++F ++ P+ +F++VL+AC+HSG V YF LM Y+I+P +
Sbjct: 431 HGHGDKALEMFREMEKGGPMPNDATFMSVLSACSHSGMVWNGWWYFDLMHRKYRIQPKPE 490
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY C+VD LG+AGL E +E L R ++ + +WG LLSACR H E + AKQ+I+L
Sbjct: 491 HYGCLVDLLGQAGLKEPSEDLTRKTHTEVEPTLWGDLLSACRAHCISEPGEILAKQLIKL 550
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
N Y+L+SN Y A ++++ R+ +K
Sbjct: 551 FPNHVVPYLLLSNTYVAEGRWDDVENLRMTLK 582
>gi|147834049|emb|CAN70994.1| hypothetical protein VITISV_038698 [Vitis vinifera]
Length = 751
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 179/490 (36%), Positives = 269/490 (54%), Gaps = 44/490 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IH+H++ G D AA+ ++ + G ++ A +F ++ + W +I G+ +
Sbjct: 282 QEIHSHVVAVGFCLDLYAATALVDM-YAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVR 340
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S NA G++ Q +E D
Sbjct: 341 SGDMDNA----------------------------------------GKLFDQMIEKDSA 360
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
NT+I Y G + AR +FDE+ E VV+W MI G + G +D +R LFD M +
Sbjct: 361 AFNTMIDAYVKLGDMCSARKLFDEM-PERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEK 419
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N SWN+MISGY +N + EAL+LF EMQ +++P E T+VS+L A A LGA+ G W+
Sbjct: 420 NLFSWNAMISGYXQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWV 479
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H F+ + T V TA+IDMY KCG ++ VF+ +P+K + WN+++ A+NG
Sbjct: 480 HRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRA 539
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ LF + P+ I+ I VL+ACNHSG V + K +F M E + + P I+HY C
Sbjct: 540 KEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGC 598
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG L+EAEKL+ SMP + + II S L AC ++ A++ K+ I+++
Sbjct: 599 MVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWN 658
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
Y+++ NLYA +++EA E + LM+ ++KE GCS IEVD V EFVAG R+HPK
Sbjct: 659 DGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKW 718
Query: 484 PEVYLLLNDL 493
++ +L L
Sbjct: 719 EAIHSVLGQL 728
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 171 IDESRRLFDKMVSRNTVSW-NSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLL 228
I +RR+FD R+ NSMI YV ++ E+ L+R+++ + P FT L
Sbjct: 210 IVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLA 269
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+CA AI +G+ IH+ +V F L+ TA++DMY K G + A ++F+ + +
Sbjct: 270 KSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQV 329
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
W +++ G +G + A KLF + ++ D +F ++ A G + A+ F M
Sbjct: 330 SWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAFNTMIDAYVKLGDMCSARKLFDEM 385
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
E S+ ++ M+ G L+ A L +MP + + W +++S
Sbjct: 386 PER-----SVVSWTIMIYGYSSNGNLDSARSLFDAMP-EKNLFSWNAMISG 430
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 168/498 (33%), Positives = 279/498 (56%), Gaps = 38/498 (7%)
Query: 5 KKIHAHLIKTGLAKD-PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
K++H+ I++GL D + + A C S G ++ VF +++ ++ W +I G+
Sbjct: 289 KQLHSWAIRSGLVDDVECSLVDMYAKC-SADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 64 QS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++ + AI LF +M+ ++P T+ S FKA L R G Q+ G+ K+GL +
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ N++I M+ K +++++R F+ +
Sbjct: 408 SSVANSVISMFV--------------------------------KSDRMEDAQRAFESLS 435
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+N VS+N+ + G RN+ F++A +L E+ E+ + S FT SLL+ A +G+IR+GE
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH+ +V N V A+I MY KCG + A +VFN + + + W SM+ G A +G+
Sbjct: 496 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 555
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
++ F+ + +KP+ ++++A+L+AC+H G V++ +F M E +KIKP ++HY+
Sbjct: 556 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 615
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD L RAGLL +A + I +MP D ++W + L ACR H N E+ K AA++I+ELD N
Sbjct: 616 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 675
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
E Y+ +SN+YA + ++EE+ E R MKE + KE GCS IEV ++H+F G HP
Sbjct: 676 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 735
Query: 483 APEVYLLLNDLGLLIQEM 500
A ++Y ++L LI E+
Sbjct: 736 AHQIY---DELDRLITEI 750
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 193/417 (46%), Gaps = 27/417 (6%)
Query: 19 DPIAASRILAFCTSPAGDINYAYLVFTQIKK----PNLFIWNTIIRGFSQSSTPRNAILL 74
D + S +L C A D LV ++ + P+ ++N++I +S+S A +
Sbjct: 61 DSVTFSSLLKSCIR-ARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 75 FIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYA 134
F M + +++ ++ Y G D ++ ++ GL + + + +I +
Sbjct: 120 FETMRRFG--KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 135 NCGFLSEARL----MFDEVDTEFDVVAWNSMIIGLAKCGE--IDESRRLFDKMVSRNTVS 188
N F+ R+ + E DV S+I K GE + + ++FDKM N V+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVT 236
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
W MI+ ++ +EA+ F +M + +FT+ S+ +ACA+L + G+ +H++ +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 249 TNCFELNTIVVTAIIDMYCKC---GCPERALQVFNTVPKKGLSCWNSMVFGLAMN-GYEN 304
+ L V +++DMY KC G + +VF+ + + W +++ G N
Sbjct: 297 RS--GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 305 EAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK--IKPSIKHY 361
EAI LFS + +++P++ +F + AC G ++ + ++ + +K + +
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKAC---GNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ ++ ++ +E+A++ S+ S+ + + + + L ++ N E A + +I E
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESL-SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
>gi|225453406|ref|XP_002271824.1| PREDICTED: pentatricopeptide repeat-containing protein At2g44880
[Vitis vinifera]
gi|297734603|emb|CBI16654.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 179/490 (36%), Positives = 269/490 (54%), Gaps = 44/490 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IH+H++ G D AA+ ++ + G ++ A +F ++ + W +I G+ +
Sbjct: 108 QEIHSHVVAVGFCLDLYAATALVDM-YAKFGKMDCARKLFDEMIDRSQVSWTALIGGYVR 166
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S NA G++ Q +E D
Sbjct: 167 SGDMDNA----------------------------------------GKLFDQMIEKDSA 186
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
NT+I Y G + AR +FDE+ E VV+W MI G + G +D +R LFD M +
Sbjct: 187 AFNTMIDAYVKLGDMCSARKLFDEM-PERSVVSWTIMIYGYSSNGNLDSARSLFDAMPEK 245
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N SWN+MISGY +N + EAL+LF EMQ +++P E T+VS+L A A LGA+ G W+
Sbjct: 246 NLFSWNAMISGYRQNKQPYEALKLFHEMQSTTSLEPDEVTIVSVLPAIADLGALDLGGWV 305
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H F+ + T V TA+IDMY KCG ++ VF+ +P+K + WN+++ A+NG
Sbjct: 306 HRFVRRKKLDRATNVGTALIDMYAKCGEIVKSRGVFDNMPEKETASWNALINAFAINGRA 365
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ LF + P+ I+ I VL+ACNHSG V + K +F M E + + P I+HY C
Sbjct: 366 KEALGLFMEMNHKGFMPNEITMIGVLSACNHSGLVEEGKRWFKAMEE-FGLTPKIEHYGC 424
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG L+EAEKL+ SMP + + II S L AC ++ A++ K+ I+++
Sbjct: 425 MVDLLGRAGCLQEAEKLMESMPYEANGIILSSFLFACGYSKDVARAERVLKEAIKMEAWN 484
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
Y+++ NLYA +++EA E + LM+ ++KE GCS IEVD V EFVAG R+HPK
Sbjct: 485 DGNYIMLRNLYANEKRWKEADEVKGLMRRNGVKKEAGCSAIEVDSRVWEFVAGDRVHPKW 544
Query: 484 PEVYLLLNDL 493
++ +L L
Sbjct: 545 EAIHSVLGQL 554
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 12/235 (5%)
Query: 171 IDESRRLFDKMVSRNTVSW-NSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLL 228
I +RR+FD R+ NSMI YV ++ E+ L+R+++ + P FT L
Sbjct: 36 IVHARRMFDHRPHRDDAFLCNSMIKAYVGMRQYSESFALYRDLRRNTSFTPDSFTFSVLA 95
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+CA AI +G+ IH+ +V F L+ TA++DMY K G + A ++F+ + +
Sbjct: 96 KSCALNMAIWEGQEIHSHVVAVGFCLDLYAATALVDMYAKFGKMDCARKLFDEMIDRSQV 155
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
W +++ G +G + A KLF + ++ D +F ++ A G + A+ F M
Sbjct: 156 SWTALIGGYVRSGDMDNAGKLFDQM----IEKDSAAFNTMIDAYVKLGDMCSARKLFDEM 211
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
E S+ ++ M+ G L+ A L +MP + + W +++S R++
Sbjct: 212 PER-----SVVSWTIMIYGYSSNGNLDSARSLFDAMP-EKNLFSWNAMISGYRQN 260
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 291/500 (58%), Gaps = 8/500 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H H + GL D + ++ F + GD+ A VF ++ + N +I G+S+
Sbjct: 139 RQVHCHALVRGLLGDVFVLTALVDF-YAKNGDMESAVSVFDEMPVKDPIPINCLITGYSK 197
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A LF M + ++ S+ YA G R+ L R++ +G +
Sbjct: 198 AGDVDKARRLFDGME-----RRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNAI 252
Query: 125 IHNTIIYMYANCGFLSEARLMFDEV--DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
++ + A G L + + D + D +V+ +++ KC ID++RR FD+M
Sbjct: 253 TITSVFSICAKSGDLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMS 312
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ V+W++MI+GY +N + E+LELF M+ + +P+E T+V +++ACA+LG+ E
Sbjct: 313 QRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQ 372
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
I N+ L + + +A+IDMY +CG RA VF+ + +KG+ WNSM+ GLAMNG+
Sbjct: 373 IGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGF 432
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+AI L+ + + ++P+ I+F+A+L AC H+G V+Q +F M + + P ++H +
Sbjct: 433 AEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCA 492
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C+VD L ++G L EA K I M +P+A+IW +LLS+CR H ++E+AK A+++++ ++ +
Sbjct: 493 CIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPD 552
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
S YVL+SN+YA + + +A E R LM+ ++K S I++DGEVH+F+ HP+
Sbjct: 553 NSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPR 612
Query: 483 APEVYLLLNDLGLLIQEMGS 502
+ E+Y +++ LGLL+ S
Sbjct: 613 SAEIYDVIHGLGLLLDRADS 632
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 210/423 (49%), Gaps = 19/423 (4%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
+F + +P + +T + S++S+ + + F M P P +FK+ A
Sbjct: 75 LFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCV-PLVFKSCALTA 133
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ G Q+H + +GL D F+ ++ YA G + A +FDE+ + D + N +I
Sbjct: 134 SSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVK-DPIPINCLI 192
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G +K G++D++RRLFD M R + SWNSMI+ Y +F+EAL LF M + +P+
Sbjct: 193 TGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNAI 252
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T+ S+ + CAK G + G+ + + + + + N IV TA+++MY KC + A + F+ +
Sbjct: 253 TITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKCRAIDDARREFDRM 311
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK---VN 339
++ + W++M+ G A NG E+++LF +++++ +P+ ++ + V++AC G V
Sbjct: 312 SQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVE 371
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
Q +Y E ++ + S ++D R G + A + M I W S++
Sbjct: 372 QIGNY----AENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRM-EQKGVITWNSMIRG 426
Query: 400 CRKHGNIEMAKQAAKQIIE--LDKNESCGYVLMSNLYAASYQ------FEEAMEERLLMK 451
+G E A +++ E + NE L++ A FEE E L+
Sbjct: 427 LAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSP 486
Query: 452 EVK 454
+V+
Sbjct: 487 QVE 489
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 34/262 (12%)
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R LFD + ++ +S R + L+ F M + + + +CA
Sbjct: 72 ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 131
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG---LSC- 289
+ QG +H + + V+TA++D Y K G E A+ VF+ +P K ++C
Sbjct: 132 TASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINCL 191
Query: 290 ---------------------------WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
WNSM+ A G EA+ LF + S +P+
Sbjct: 192 ITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNA 251
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
I+ +V + C SG ++ K L+ E ++ I H + M + + +++A +
Sbjct: 252 ITITSVFSICAKSGDLDTGKRVRDLIGED-DLQNVIVHTALM-EMYVKCRAIDDARREFD 309
Query: 383 SMPSDPDAIIWGSLLSACRKHG 404
M S D + W ++++ ++G
Sbjct: 310 RM-SQRDVVAWSTMIAGYAQNG 330
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/461 (37%), Positives = 267/461 (57%), Gaps = 3/461 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+ A V + N W T+I Q A+ L+ ML +P + S+
Sbjct: 327 GDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADG-CRPNISCFSSV 385
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A A L R G ++H +K G + F+ +++I MY C + A+ +F+ + E +
Sbjct: 386 LSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSL-PEKN 444
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V WNS+I G + G++ E+ LF+KM +RN+VSWN+MISGY N +F +AL F M
Sbjct: 445 TVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLA 504
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
P E T+ S+L ACA L ++ G +H +V E N + TA+ DMY K G +
Sbjct: 505 SGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDS 564
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
+ +VF +P+K W +MV GLA NG+ E+I LF + + + P+ +F+A+L AC+H
Sbjct: 565 SRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSH 624
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
G V QA YF M + + I P KHY+CMVD L RAG L EAE+L+ + S+ D W
Sbjct: 625 CGLVEQAIHYFETM-QAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWS 683
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
SLLSAC + N E+ ++AAK++ EL+K+ + GYVL+SN+YA+ ++++A E R+LM+
Sbjct: 684 SLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGAS 743
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGL 495
++K+ GCS +++ G+ H F + HP + E+Y +L+ L L
Sbjct: 744 LKKDAGCSWLQLRGQYHAFFSWKEKHPLSLEIYEILDLLML 784
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 196/413 (47%), Gaps = 45/413 (10%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A ++ + ++ + +I GF ++ ++A +F ML S ++P +T +
Sbjct: 194 GSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFPVFRKMLTCS-VRPNVVTLICV 252
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFI--HNTIIYMYANCGFLSEARLMFDEVDTE 152
KA G + G VK L F++ I HN++I +Y G + A +FD+++
Sbjct: 253 IKACVGAGEFDLAMGVVGLAVKCNL-FEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVR 311
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
DVV+W +++ A G++ +RR+ D M +RN VSW ++I+ + + EAL+L+ +M
Sbjct: 312 -DVVSWTALLDVYADLGDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQM 370
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+P+ S+L+ACA L +R G IH + N V +++IDMYCKC
Sbjct: 371 LADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQC 430
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
A +VFN++P+K CWNS++ G + NG EA LF+ + + N +S+ +++
Sbjct: 431 TYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARN----SVSWNTMISGY 486
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+ + A +YF M + I P I
Sbjct: 487 AENRRFGDALNYFYAMLASGHI---------------------------------PGEIT 513
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIEL--DKNESCGYVLMSNLYAASYQFEEA 443
S+L AC ++EM + +I++L + N G L S++YA S + +
Sbjct: 514 LSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTAL-SDMYAKSGDLDSS 565
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 167/410 (40%), Gaps = 88/410 (21%)
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF-DVVA--------WN 159
LH + GL D+ + + ++ YA F A + D F D VA ++
Sbjct: 101 SLHAHAFRSGLTADRSVASNLLTAYA--AFTRAA-----DRDQAFRDCVAADAASSFTYD 153
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNS---------------------------- 191
M+ K G+I +RRLF M ++ VS+ +
Sbjct: 154 FMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAF 213
Query: 192 ---MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA------------ 236
MISG+VRN K+A +FR+M +++P+ T++ ++ AC G
Sbjct: 214 FTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAV 273
Query: 237 ----IRQGEWIHNFLVT---------------NCFELNTIVV-TAIIDMYCKCGCPERAL 276
+ +HN L+T + E+ +V TA++D+Y G A
Sbjct: 274 KCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGAR 333
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
+V + +P + W +++ G EA+KL+S + + +P+ F +VL+AC
Sbjct: 334 RVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSAC---A 390
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+ + + K+ S + S ++D + A+++ S+P + + + W
Sbjct: 391 TLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLP-EKNTVCWN 449
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
SL+S +G + +A ++ S + M + YA + +F +A+
Sbjct: 450 SLISGYSWNGKM---VEAEGLFNKMPARNSVSWNTMISGYAENRRFGDAL 496
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 103/217 (47%), Gaps = 5/217 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +HA ++K G+ +D I L+ + +GD++ + VF Q+ + N W +++G ++
Sbjct: 531 RMVHAEIVKLGI-EDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAE 589
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ +I LF DM + + I P T+ ++ A + GL + G+
Sbjct: 590 NGFAEESISLFEDM-IENGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIPPKSK 648
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA--KCGEIDE-SRRLFDKM 181
+ ++ + A G L EA + +V +E D +W+S++ + + EI E + + ++
Sbjct: 649 HYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHEL 708
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
NT + + + Y K+K+A E MQ ++K
Sbjct: 709 EKDNTAGYVLLSNMYASCGKWKDAAETRILMQGASLK 745
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 299/570 (52%), Gaps = 79/570 (13%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K L++IH +I + K R + D N A L+F+QI PN + +N +IRG
Sbjct: 45 KSLQQIHTQMIINAIHKPNFLLHRFIDL-----KDFNNASLLFSQIPYPNEYAFNIMIRG 99
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ + N + F + I+P TYP +F A A L + G H V+K GL
Sbjct: 100 LTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCA 159
Query: 122 DQFIHNTIIYM-------------------------------YANCGFLSEARLMFDE-- 148
D + +++I M Y+ G+ +A +F E
Sbjct: 160 DGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMR 219
Query: 149 ----------------------------------VDTEFDVVAW-NSMIIGL-AKCGEID 172
V+ E D+ ++ S +IG+ KCG++
Sbjct: 220 DAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLS 279
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
+RR+FD+MV ++ V+WN+MI+GY +N EA+ LF M+E + P + T+V +L+ACA
Sbjct: 280 SARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACA 339
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
+GA+ G+W+ + + + V TA+IDMY KCG + AL+VF +P+K WN+
Sbjct: 340 SIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNA 399
Query: 293 MVFGLAMNGYENEAIKLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
M+ LA +G E++ LF + + ++P+ ISFI VL+AC H+G V++ + F LM+
Sbjct: 400 MISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSS 459
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
++ + P I+H+SCMVD L RAG + EA I MP PD ++ G+LL AC+K N+++++
Sbjct: 460 SFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSE 519
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
+ ++E++ S Y++ S ++A +++++ R+LM++ + K PGCS IE++ +V
Sbjct: 520 RVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQV 579
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEM 500
HEF AG LH + ++ ++N LL +EM
Sbjct: 580 HEFHAGDVLHFISQDMCQVIN---LLNEEM 606
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 276/497 (55%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH + ++ G + + S L S G + A L+F ++ + WN++I G+ Q
Sbjct: 296 RSIHGYSMRAGF-ESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQ 354
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P A+ +F M+ ++ +T A A LG V+QG +F
Sbjct: 355 NGDPGAAMEIFQKMM-DEQVEMTNVTVMGALHACADLG-----------DVEQG----RF 398
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+H + D+++ DV NS+I +KC +D + +F+ + +
Sbjct: 399 VHK-----------------LLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHK 441
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
VSWN+MI GY +N + EA++ F +MQ QNIKP FTMVS++ A A+L + Q +WIH
Sbjct: 442 TLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIH 501
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ C + N V TA++DMY KCG A ++F+ + ++ ++ WN+M+ G +G
Sbjct: 502 GLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGK 561
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A++LF ++ +KP+ ++F+ VL+AC+HSG V + YF M + Y ++P++ HY M
Sbjct: 562 AALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAM 621
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRA L EA I+ MP +P ++G++L ACR H N+E+ ++AA +I +LD ++
Sbjct: 622 VDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDG 681
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
+VL++N+YA + +++ R M++ I+K PG S++E+ EVH F +G HP+A
Sbjct: 682 GYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAK 741
Query: 485 EVYLLLNDLGLLIQEMG 501
++Y L LG I+ G
Sbjct: 742 KIYAFLETLGNRIKAAG 758
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 171/351 (48%), Gaps = 36/351 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
MK+L + +IK GL + + +++++ FC G ++ A VF I+ +++T++
Sbjct: 90 MKELHQFIPLIIKNGLYSEHLFQTKLVSLFCK--FGSLHEAARVFQPIEDKIDELYHTML 147
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+G++++S+ +A+ F M ++P + L K R G ++H +++ G
Sbjct: 148 KGYARNSSLDDAVSFFCRMRYDG-VRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGF 206
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ F ++ MYA KC ++E+ ++FD
Sbjct: 207 ASNVFAMTGVVNMYA--------------------------------KCRLVEEAYKMFD 234
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M R+ V WN++ISGY +N K ALEL MQE+ +P T+VS+L A A +G++R
Sbjct: 235 RMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRI 294
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G IH + + FE V TA++DMY KCG A +F+ + K + WNSM+ G
Sbjct: 295 GRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQ 354
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
NG A+++F + ++ ++ + L AC G V Q + L+ +
Sbjct: 355 NGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQ 405
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 136/275 (49%), Gaps = 11/275 (4%)
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
K G + E+ R+F + + +++M+ GY RN +A+ F M+ ++P +
Sbjct: 121 KFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTY 180
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
LL C +R+G+ IH L+ N F N +T +++MY KC E A ++F+ +P++
Sbjct: 181 LLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERD 240
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
L CWN+++ G A NG+ A++L +Q +PD I+ +++L A G + +
Sbjct: 241 LVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRS--- 297
Query: 347 LMTETYKIKPSIKHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
Y ++ + + + +VD + G + A +LI + + W S++ +
Sbjct: 298 --IHGYSMRAGFESFVNVSTALVDMYSKCGSVGTA-RLIFDRMTGKTVVSWNSMIDGYVQ 354
Query: 403 HGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
+G+ A + +++++ ++ E +M L+A +
Sbjct: 355 NGDPGAAMEIFQKMMD-EQVEMTNVTVMGALHACA 388
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 243 IHNFL---VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
+H F+ + N + T ++ ++CK G A +VF + K +++M+ G A
Sbjct: 93 LHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYAR 152
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIKPSI 358
N ++A+ F ++ ++P +F +L C + + + K+ + L+ + ++
Sbjct: 153 NSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGF--ASNV 210
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ +V+ + L+EEA K+ MP + D + W +++S ++G
Sbjct: 211 FAMTGVVNMYAKCRLVEEAYKMFDRMP-ERDLVCWNTIISGYAQNG 255
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 275/498 (55%), Gaps = 37/498 (7%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
D +++H+ +K+ L + A+ IL ++ A +F ++++ + WN +I
Sbjct: 396 DGRQLHSLSVKSTLRSNICVANSILDM-YGKCEALSEACCMFDEMERRDAVSWNAVIAAH 454
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
Q+ + LF ML ++P + TY S+ KA + G ++H R++K GL D
Sbjct: 455 EQNGNEEETLNLFASMLRLR-MEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLD 513
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ +I MY KCG I+E++++ D++
Sbjct: 514 SFVGGALIDMYC--------------------------------KCGMIEEAKKIHDRIE 541
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+ VSWN++I+G+ ++A F EM + ++KP FT +L+ACA L ++ G+
Sbjct: 542 QQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQ 601
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH ++ + + + ++DMY KCG + + VF P K WN+M+ G A +G
Sbjct: 602 IHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGL 661
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
EA+ F +Q N++P++ +F+++L AC H G +++ YF M Y ++P I+HYS
Sbjct: 662 GEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYS 721
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CM+D +GR+G + EA KLI+ MP + DA+IW +LLS C+ HGNIE+A++A I++L+
Sbjct: 722 CMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPE 781
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+S +L+SN+YA + + + E R +M+ K++KEPGCS IEV EVH F+ G + HP+
Sbjct: 782 DSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPR 841
Query: 483 APEVYLLLNDLGLLIQEM 500
E+Y +L+ +L+ EM
Sbjct: 842 YEEIYKILS---VLLDEM 856
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 182/376 (48%), Gaps = 34/376 (9%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ AG++N A F K ++ WN+++ GF Q+ R +I +F+DM + + + T+
Sbjct: 120 ADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTF 179
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
+ KA + L G Q+HG +V+ G D + ++ MYA
Sbjct: 180 AVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYA----------------- 222
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
KC +D+S ++F ++ +N V W+++I+G V+N + LELF+E
Sbjct: 223 ---------------KCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKE 267
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ+ I S+ S+ +CA L A++ G +H + F + V TA +DMY KCG
Sbjct: 268 MQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGS 327
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A ++FN++PK L C+N+++ G N EA++ F L S L + IS +A
Sbjct: 328 LADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSA 387
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C + +L ++ ++ +I + ++D G+ L EA + M DA+
Sbjct: 388 CASIKGDLDGRQLHSLSVKS-TLRSNICVANSILDMYGKCEALSEACCMFDEMER-RDAV 445
Query: 392 IWGSLLSACRKHGNIE 407
W ++++A ++GN E
Sbjct: 446 SWNAVIAAHEQNGNEE 461
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 164/339 (48%), Gaps = 18/339 (5%)
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL-------GLARDGAQLHGRVVKQGLEFD 122
N L S +Q + P+ + ++ + + G Q H R++ G D
Sbjct: 18 NKTLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPD 77
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+I N ++ MY C L+ A +F+++ ++ DV+++N+MI G A GE++ + F
Sbjct: 78 VYISNCLMKMYLRCSHLNYAYKVFEKM-SQRDVISYNTMISGYADAGEMNLANEFFYDTP 136
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ VSWNSM+SG+++N + ++++++F +M + + + + T +L AC+ L G
Sbjct: 137 KRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGI 196
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H +V F + + +A++DMY KC + +L++F+ +P K CW++++ G N
Sbjct: 197 QVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQND 256
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK--IKPSIK 359
++LF +Q + + +V +C ++ K L K I
Sbjct: 257 EHILGLELFKEMQKVGIGVSQSIYASVFRSC---AGLSALKVGTQLHAHALKCDFGSDIT 313
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDP----DAIIWG 394
+ +D + G L +A+++ S+P +AII G
Sbjct: 314 VGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVG 352
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 213 QEQNIKPSEF-TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
Q Q P++ T ++ C+ +++ G+ H ++ + F + + ++ MY +C
Sbjct: 34 QNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSH 93
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A +VF + ++ + +N+M+ G A G N A + F K D +S+ ++L+
Sbjct: 94 LNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFF----YDTPKRDVVSWNSMLSG 149
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA---LGRAGLLEEAEKLIRSMPSDP 388
+G+ ++ D F M + ++ ++ ++ A L GL + LI M
Sbjct: 150 FLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYK 209
Query: 389 DAIIWGSLL 397
D + +LL
Sbjct: 210 DVVTGSALL 218
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 300/567 (52%), Gaps = 72/567 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K+ K++H +++K G + + ++A G + A+ +F ++ +P++ WN++I
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIA-AYFKFGGVESAHNLFDELSEPDVVSWNSMIN 269
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G + N + +FI ML+ ++ T S+ A A +G G LHG VK
Sbjct: 270 GCVVNGFSGNGLEIFIQMLILG-VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFS 328
Query: 121 FDQFIHNTIIYMYANC-------------------------------GFLSEARLMFDE- 148
+ NT++ MY+ C G S+A +FDE
Sbjct: 329 EEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEM 388
Query: 149 ------------------------VDTEFDVVAW-------------NSMIIGLAKCGEI 171
+D DV ++ N++I AKCG +
Sbjct: 389 QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSV 448
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
+E+R +F K+ ++ VSWN+MI GY +N+ EALELF +MQ+Q KP + TM +L AC
Sbjct: 449 EEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPAC 507
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A L A+ +G IH ++ + + V A++DMY KCG A +F+ +PKK L W
Sbjct: 508 AGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWT 567
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
M+ G M+G+ NEAI F+ ++ + ++PD SF A+L AC+HSG +N+ +F M
Sbjct: 568 VMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNE 627
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
++P ++HY+C+VD L R G L +A K I SMP PD IWG LLS CR H ++++A++
Sbjct: 628 CGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEK 687
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
A+ I EL+ + + YV+++N+YA + ++EE + R M++ ++ PGCS IEV G+ +
Sbjct: 688 VAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFN 747
Query: 472 EFVAGGRLHPKAPEVYLLLNDLGLLIQ 498
FVAG HP+A ++ +LL+ L + +Q
Sbjct: 748 IFVAGNSKHPQAKKIDVLLSKLTMQMQ 774
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 212/476 (44%), Gaps = 80/476 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++D K++H+ +I G++ D ++ L F GD+ +F +I +F+WN ++
Sbjct: 110 LEDGKRVHSVIISNGISVDEALGAK-LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMS 168
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+++ R ++ LF M + T+ + K +A LG ++ ++HG V+K G
Sbjct: 169 EYAKIGNFRESVSLFKKMQKLGVV-GNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFG 227
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ + N++I Y G + A +FDE+ +E DVV+WNSMI G G +F +
Sbjct: 228 SNTAVVNSLIAAYFKFGGVESAHNLFDEL-SEPDVVSWNSMINGCVVNGFSGNGLEIFIQ 286
Query: 181 MV---------------------------------------SRNTVSWNSMISGYVRNVK 201
M+ S V N+++ Y +
Sbjct: 287 MLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGN 346
Query: 202 FKEALELFREM-------------------------------QEQNIKPSEFTMVSLLNA 230
A E+F +M Q + ++P +T+ S+++A
Sbjct: 347 LNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHA 406
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA ++ +G +H++++ N N V A+I+MY KCG E A VF+ +P K + W
Sbjct: 407 CACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSW 466
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMT 349
N+M+ G + N NEA++LF +Q KPD I+ VL AC +++ ++ + ++
Sbjct: 467 NTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILR 525
Query: 350 ETYKIKPSIKHYSC-MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
Y S H +C +VD + GLL A+ L +P D I W +++ HG
Sbjct: 526 RGY---FSDLHVACALVDMYAKCGLLVLAQLLFDMIPK-KDLISWTVMIAGYGMHG 577
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 190/442 (42%), Gaps = 86/442 (19%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRL-TYPSLFKAYAQLGLARDGAQLHGRV 114
N I F + RNAI ++L S L +Y S+ + A+ DG ++H +
Sbjct: 65 NAKINKFCEMGDLRNAI----ELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVI 120
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
+ G+ D+ + +++MY NCG ++ +
Sbjct: 121 ISNGISVDEALGAKLVFMYVNCG--------------------------------DLVQG 148
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R++FDK+++ WN ++S Y + F+E++ LF++MQ+ + + +T +L A L
Sbjct: 149 RKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAAL 208
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G +++ + +H +++ F NT VV ++I Y K G E A +F+ + + + WNSM+
Sbjct: 209 GKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMI 268
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC---------------------- 332
G +NG+ +++F + ++ D + ++VL AC
Sbjct: 269 NGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFS 328
Query: 333 -------------NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
+ G +N A + F M +T +I ++ ++ A R GL +A
Sbjct: 329 EEVVFSNTLLDMYSKCGNLNGATEVFVKMGDT-----TIVSWTSIIAAYVREGLYSDAIG 383
Query: 380 LIRSMPSD---PDAIIWGSLLSACRKHGNIEMAKQAAKQIIE--LDKNESCGYVLMSNLY 434
L M S PD S++ AC +++ + +I+ + N L+ N+Y
Sbjct: 384 LFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALI-NMY 442
Query: 435 AASYQFEEAMEERLLMKEVKIE 456
A EEA RL+ ++ ++
Sbjct: 443 AKCGSVEEA---RLVFSKIPVK 461
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 273/502 (54%), Gaps = 37/502 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
++D +KIHAHL + A D + S I +C + + A VF Q+++ ++ W ++I
Sbjct: 67 LEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRS--VLDARNVFDQMRRKDMVSWTSLI 124
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G++Q+ P AI L ML +P T+ SL KA + G Q+H VK G
Sbjct: 125 AGYAQNDMPVEAIGLLPGML-KGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGW 183
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D ++ + ++ MYA +CG++D + +FD
Sbjct: 184 HEDVYVGSALLDMYA--------------------------------RCGKMDMATAVFD 211
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
K+ S+N VSWN++ISG+ R + AL F EM + + FT S+ ++ A+LGA+ Q
Sbjct: 212 KLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQ 271
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+W+H ++ + +L V ++DMY K G A +VF+ V K L WNSM+ A
Sbjct: 272 GKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQ 331
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
G EA+ F ++ S + + I+F+ +LTAC+H G V + K YF +M E Y ++P I
Sbjct: 332 YGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEID 390
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY +V LGRAGLL A I MP +P A +WG+LL+ACR H N ++ + AA + EL
Sbjct: 391 HYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFEL 450
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D ++S VL+ N+YA++ Q++ A R++MK ++KEP CS +E++ VH FVA
Sbjct: 451 DPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDT 510
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+A E+Y + ++ I++ G
Sbjct: 511 HPQAEEIYKMWGEISKKIRKEG 532
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 155/353 (43%), Gaps = 41/353 (11%)
Query: 72 ILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIY 131
+L +D+L + P Y S A AQ D ++H + D F+ N++I+
Sbjct: 35 VLRDLDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIH 94
Query: 132 MYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNS 191
MY C + +AR +FD++ + D+V+W S
Sbjct: 95 MYCKCRSVLDARNVFDQMRRK-DMVSW-------------------------------TS 122
Query: 192 MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
+I+GY +N EA+ L M + KP+ FT SLL A G IH V
Sbjct: 123 LIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCG 182
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
+ + V +A++DMY +CG + A VF+ + K WN+++ G A G A+ F+
Sbjct: 183 WHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFA 242
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--SCMVDALG 369
+ + + + ++ +V ++ G + Q K + K + + + + ++D
Sbjct: 243 EMLRNGFEATHFTYSSVFSSIARLGALEQGK---WVHAHVIKSRQKLTAFVGNTLLDMYA 299
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
++G + +A K+ + + D + W S+L+A ++G + K+A E+ K+
Sbjct: 300 KSGSMIDARKVFDRV-DNKDLVTWNSMLTAFAQYG---LGKEAVSHFEEMRKS 348
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/495 (32%), Positives = 284/495 (57%), Gaps = 36/495 (7%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+ HAH++K GL DP + +++ +S +G ++A +F + ++ W +I GF ++
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSS-SGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQF 124
+ A++ F++M T + +T S+ KA ++ R G +HG ++ G ++ D F
Sbjct: 183 GSASEAMVYFVEMKKTG-VAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I ++++ MY KC D+++++FD+M SR
Sbjct: 242 IGSSLVDMYG--------------------------------KCSCYDDAQKVFDEMPSR 269
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N V+W ++I+GYV++ F + + +F EM + ++ P+E T+ S+L+ACA +GA+ +G +H
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH 329
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+++ N E+NT T +ID+Y KCGC E A+ VF + +K + W +M+ G A +GY
Sbjct: 330 CYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYAR 389
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A LF + SS++ P+ ++F+AVL+AC H G V + + F M + ++ HY+CM
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMELKADHYACM 449
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD GR GLLEEA+ LI MP +P ++WG+L +C H + E+ K AA ++I+L + S
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHS 509
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP-KA 483
Y L++NLY+ S ++E R MK+ ++ K PG S IEV G++ EF+A P ++
Sbjct: 510 GRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLES 569
Query: 484 PEVYLLLNDLGLLIQ 498
++Y L+ +G+ ++
Sbjct: 570 DDLYKTLDTVGVQMR 584
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/503 (32%), Positives = 269/503 (53%), Gaps = 40/503 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IHA +K G A+ LA + G + Y +F ++ ++ W TII Q
Sbjct: 237 REIHAQAMKKGFDVSSFVAN-TLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQ 295
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ FI M S + P T+ ++ A L G QLH ++ GL
Sbjct: 296 MGQEECAVQAFIRMR-ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLS 354
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N+I+ MYA KCG++ S +F +M R
Sbjct: 355 VENSIMTMYA--------------------------------KCGQLTSSSVIFHEMTRR 382
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSW+++I+GY + EA EL M+ + KP+EF + S+L+AC + + G+ +H
Sbjct: 383 DIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLH 442
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++++ E +V++A+I+MYCKCG E A ++F+ + W +M+ G A +GY
Sbjct: 443 AYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSR 502
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
E I LF + L+PD ++FI VL+AC+H+G V+ YF M++ Y+I PS +HY CM
Sbjct: 503 EVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCM 562
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
+D L RAG L +AE +I +MP D ++W +LL ACR HG++E ++ A++I++L+ N +
Sbjct: 563 IDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCA 622
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
++ ++N+YA+ ++ EA + R LMK + KEPG S I+V V FVAG R HP+
Sbjct: 623 GTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGE 682
Query: 485 EVYLLLN------DLGLLIQEMG 501
++Y +L+ +L +QE G
Sbjct: 683 DIYNMLDLLASRTELADCVQETG 705
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 170/378 (44%), Gaps = 40/378 (10%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A +F ++ + + W T+I G+ ++ A+LLF +M V S + R+ L
Sbjct: 63 GHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL---RIDPFIL 119
Query: 95 FKAYAQLGLARD---GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
A+ GL D G LHG VK GL F+ + ++ MY
Sbjct: 120 SLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYT----------------- 162
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
K G+I E RR+F +M RN VSW ++I+G VR KEAL F E
Sbjct: 163 ---------------KNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSE 207
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M ++ +T L ACA GA+ G IH + F++++ V + MY KCG
Sbjct: 208 MWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGK 267
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
E L +F + + + W +++ L G E A++ F ++ S++ P+ +F AV++
Sbjct: 268 LEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISG 327
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C + ++ + L+ + S+ + ++ + G L + + M + D +
Sbjct: 328 CANLARIEWGEQLHALILH-LGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM-TRRDIV 385
Query: 392 IWGSLLSACRKHGNIEMA 409
W ++++ + G++ A
Sbjct: 386 SWSTIIAGYXQGGHVSEA 403
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 5/272 (1%)
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
++ D+ N + L K G + +RR+FDKM ++ +SW ++ISGYV EAL LF+
Sbjct: 45 SQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFK 104
Query: 211 EMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
M+ E ++ F + AC + GE +H + V + V +A++DMY K
Sbjct: 105 NMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKN 164
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G +VF+ +P + + W +++ GL GY EA+ FS + S ++ D +F L
Sbjct: 165 GKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIAL 224
Query: 330 TACNHSGKVNQAKD-YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
AC SG +N ++ + M + + + + + + + G LE L M S
Sbjct: 225 KACADSGALNYGREIHAQAMKKGFDVSSFVA--NTLATMYNKCGKLEYGLTLFEKM-SMR 281
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
D + W ++++ + G E A QA ++ E D
Sbjct: 282 DVVSWTTIITTLVQMGQEECAVQAFIRMRESD 313
>gi|414885893|tpg|DAA61907.1| TPA: hypothetical protein ZEAMMB73_945776 [Zea mays]
Length = 584
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/439 (38%), Positives = 261/439 (59%), Gaps = 6/439 (1%)
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQFI 125
P A+ LF D L+ S P Y F + A+ AQLH K+GL + +
Sbjct: 55 NPHLALRLF-DHLLRSGADPDPAAYELAFASCARARDRATAAQLHAHAAKRGLVASHRRV 113
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK-CGEIDESRRLFDKMVSR 184
+++ YA CG L AR +FD T+ D+VAWN ++ G A+ G+ D R F +M SR
Sbjct: 114 RCRLVHAYAVCGMLPHARRVFDG-GTDNDMVAWNCLLRGYAQEGGDEDLLRDFFARMPSR 172
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
++VSWN+++S V N ++ EA+ +FREM Q +P T+VS+++A A LGA+ G W
Sbjct: 173 DSVSWNTVLSWCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAHGLWA 232
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGY 302
H ++ C E+ + +A+I+MY KCG E A+ VF+ V K+ L WN+M+ G NGY
Sbjct: 233 HAYVFRKCIEVEEKLSSALINMYSKCGFIEGAVYVFDNVGGKRSLDTWNAMLAGFTANGY 292
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
A++LF+ ++S+ L P+ I+F VL AC+H G V + YF M+ Y I+P I HY
Sbjct: 293 SERALELFTRMESTRLMPNKITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHYG 352
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD RAG+ E+AE++I++MP +PDA + +LL ACR H N+E+ K+ ++IE N
Sbjct: 353 CMVDLFCRAGMFEKAEEIIQTMPMEPDASMLKALLGACRTHKNLELGKKVGHRLIEAAAN 412
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+ GYVL+SN+YA + + R LM + + K PG S +E++G +HEF++G + H +
Sbjct: 413 DHAGYVLLSNIYALDGNWGGVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHSR 472
Query: 483 APEVYLLLNDLGLLIQEMG 501
++Y +L ++ ++ G
Sbjct: 473 KRDIYKMLGEICQQLKSSG 491
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 126/311 (40%), Gaps = 64/311 (20%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++HAH K GL L + G + +A VF ++ WN ++RG++Q
Sbjct: 96 QLHAHAAKRGLVASHRRVRCRLVHAYAVCGMLPHARRVFDGGTDNDMVAWNCLLRGYAQE 155
Query: 66 STPRN--------------------------------AILLFIDMLVTSPIQPQRLTYPS 93
+ AI +F +ML + QP R+T S
Sbjct: 156 GGDEDLLRDFFARMPSRDSVSWNTVLSWCVVNGEYDEAIAVFREMLASQECQPDRVTLVS 215
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ A A LG G H V ++ +E ++ + + +I MY+ CGF+ A +FD V +
Sbjct: 216 VVSAIAYLGALAHGLWAHAYVFRKCIEVEEKLSSALINMYSKCGFIEGAVYVFDNVGGKR 275
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+ WN+M+ G + N + ALELF M+
Sbjct: 276 SLDTWNAMLAG-------------------------------FTANGYSERALELFTRME 304
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+ P++ T ++LNAC+ G + +G ++ E + ++D++C+ G
Sbjct: 305 STRLMPNKITFNTVLNACSHGGLVEEGMKYFQRMSRFYGIEPDIAHYGCMVDLFCRAGMF 364
Query: 273 ERALQVFNTVP 283
E+A ++ T+P
Sbjct: 365 EKAEEIIQTMP 375
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/490 (33%), Positives = 276/490 (56%), Gaps = 35/490 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +H ++K L D + +L + GD+ A +F ++ N +W ++I G+ +
Sbjct: 99 KVLHGQVVKYMLHSDLYIETTLLNM-YAACGDLKSARFLFERMGHRNKVVWTSMISGYMK 157
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P A+LL+ M P +T +L A A+L G +LH + + ++
Sbjct: 158 NHCPNEALLLYKKM-EEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV 216
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ + ++ MYA KCG++ +R++FD++ +
Sbjct: 217 LGSALVNMYA--------------------------------KCGDLKTARQVFDQLSDK 244
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+ +W+++I GYV+N + EAL+LFRE+ N++P+E T++++++ACA+LG + G W+
Sbjct: 245 DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWV 304
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H+++ + + ++IDM+ KCG + A ++F+++ K L WNSMV GLA++G
Sbjct: 305 HDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLG 364
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ F +Q+++L+PD I+FI VLTAC+H+G V + K F + Y ++ +HY C
Sbjct: 365 REALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGC 424
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD L RAGLL EA + IR MP PD IWGS+L ACR + N+E+ ++AA+ ++EL+
Sbjct: 425 MVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTN 484
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
Y+L+SN+YA + E + R LM E I+K PGCS + +D H F+AG HP+
Sbjct: 485 DGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEI 544
Query: 484 PEVYLLLNDL 493
E+ ++L +
Sbjct: 545 AEISIMLRQV 554
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 208/407 (51%), Gaps = 39/407 (9%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAG-DINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPR 69
++ TG + ++++A S + YAY VF + ++ WN+++R F S+ PR
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPR 60
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
A+ + +ML S P R T+PSL K A L + G LHG+VVK L D +I T+
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 189
+ MYA CG L AR +F+ + VV W S
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVV-WTS----------------------------- 150
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
MISGY++N EAL L+++M+E P E TM +L++ACA+L + G +H+ +
Sbjct: 151 --MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIRE 208
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
++ ++ +A+++MY KCG + A QVF+ + K + W++++FG N EA++L
Sbjct: 209 MDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQL 268
Query: 310 FSGLQ-SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL 368
F + SN++P+ ++ +AV++AC G + + +T T K S+ + ++D
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLNNSLIDMF 327
Query: 369 GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
+ G ++ A+++ SM S D I W S+++ HG + ++A Q
Sbjct: 328 SKCGDIDAAKRIFDSM-SYKDLISWNSMVNGLALHG---LGREALAQ 370
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/505 (34%), Positives = 273/505 (54%), Gaps = 43/505 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+ D +KIH HL + D + S I +C G + A+ VF +++K ++ W ++I
Sbjct: 67 LDDARKIHGHLASSRFEGDAFLDNSLIHLYC--KCGSVVEAHKVFDKMRKKDMVSWTSLI 124
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA---YAQLGLARDGAQLHGRVVK 116
G++Q+ P AI L ML +P T+ SL KA YA G+ G Q+H VK
Sbjct: 125 AGYAQNDMPAEAIGLLPGML-KGRFKPNGFTFASLLKAAGAYADSGI---GGQIHALAVK 180
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
D ++ + ++ MYA +CG++D +
Sbjct: 181 CDWHEDVYVGSALLDMYA--------------------------------RCGKMDMATA 208
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FDK+ S+N VSWN++ISG+ R + AL +F EMQ + + FT S+ + A +GA
Sbjct: 209 VFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGA 268
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ QG+W+H +V + +L V ++DMY K G A +VF V K L WNSM+
Sbjct: 269 LEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTA 328
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
A G EA+ F ++ S + + I+F+ +LTAC+H G V + K YF ++ E Y ++P
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKE-YNLEP 387
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
I+HY +VD LGRAGLL A I MP +P A +WG+LL+ACR H N ++ + AA +
Sbjct: 388 EIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHV 447
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+LD ++S VL+ N+YA++ ++ A R +MK ++KEP CS +E+ VH FVA
Sbjct: 448 FQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVAN 507
Query: 477 GRLHPKAPEVYLLLNDLGLLIQEMG 501
HP+A E+Y + +++ + I++ G
Sbjct: 508 DDTHPRAEEIYKMWDEISMKIRKEG 532
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 158/347 (45%), Gaps = 37/347 (10%)
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
+D L + + P Y + A AQ D ++HG + E D F+ N++I++Y
Sbjct: 39 LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYC- 97
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
KCG + E+ ++FDKM ++ VSW S+I+G
Sbjct: 98 -------------------------------KCGSVVEAHKVFDKMRKKDMVSWTSLIAG 126
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN 255
Y +N EA+ L M + KP+ FT SLL A G IH V + +
Sbjct: 127 YAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHED 186
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
V +A++DMY +CG + A VF+ + K WN+++ G A G A+ +F+ +Q
Sbjct: 187 VYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQR 246
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLE 375
+ + + ++ ++ + G + Q K M ++ + K + + M+D ++G +
Sbjct: 247 NGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKS-RQKLTAFVGNTMLDMYAKSGSMI 305
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
+A K+ + + D + W S+L+A ++G + K+A E+ K+
Sbjct: 306 DARKVFERVL-NKDLVTWNSMLTAFAQYG---LGKEAVSHFEEMRKS 348
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 298/531 (56%), Gaps = 36/531 (6%)
Query: 5 KKIHAHLIKTGLAK----------------DPIAA----SRILAFCTSP----------A 34
+K+H+ ++K GL+ DP+ A R+ TS +
Sbjct: 165 RKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQS 224
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A + F Q+ + ++ WN +I G++Q R A+ +F ML+ S +P + T S
Sbjct: 225 GLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASA 284
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQF--IHNTIIYMYANCGFLSEARLMFDE-VDT 151
A A L + G Q+H +++ EFD F + N +I MY+ G + A+ + ++ + +
Sbjct: 285 LSACANLENLKLGKQIHAHIIRT--EFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMIS 342
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
DV+A+ +++ G K G+I+ +RR+FD + R+ V+W +MI GYV+N ++A+ELFR
Sbjct: 343 NLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRS 402
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M ++ KP+ +T+ ++L+ + L ++ G IH + + V A+I MY K G
Sbjct: 403 MIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGS 462
Query: 272 PERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
A VFN + K+ W SM+ LA +G EA+ LF + + +KPD+I+++ VL+
Sbjct: 463 INDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLS 522
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC H G V Q + Y+ LM +KI P+ HY+CM+D GRAGLL+EA I +MP +PD
Sbjct: 523 ACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDV 582
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
I WGSLL++C+ H N+E+A+ AA++++ ++ S Y ++N+Y+A Q+E A R M
Sbjct: 583 IAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSM 642
Query: 451 KEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
K+ ++K+ G S +++ +VH F LHP+ +Y ++ + I++MG
Sbjct: 643 KDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMG 693
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 186/370 (50%), Gaps = 47/370 (12%)
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
++TSP P Y S + + G +H R++K GL F+ N ++ YA GF
Sbjct: 8 ILTSPSDP----YTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGF 63
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
+ +A +FDE+ + V +WN ++ G AK G ++E+ R+F++M ++VSW +MI GY +
Sbjct: 64 IYDAHRVFDEMPVK-SVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQ 122
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
+F+ A+ +FREM ++ P++FT+ ++L +CA + + G +H+F+V + V
Sbjct: 123 MGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISV 182
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS-------------------------- 292
++++MY K G P A VF+ + K S WN+
Sbjct: 183 ANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDV 242
Query: 293 -----MVFGLAMNGYENEAIKLFSG-LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
M+ G +G++ EA+ +FS L S+ KPD + + L+AC + + K
Sbjct: 243 VSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQ--- 299
Query: 347 LMTETYKIKPSIKHYSCMVDAL----GRAGLLEEAEKLI-RSMPSDPDAIIWGSLLSACR 401
+ I+ + + +AL ++G +E A+K+I +SM S+ D I + +LL
Sbjct: 300 --IHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYV 357
Query: 402 KHGNIEMAKQ 411
K G+I A++
Sbjct: 358 KLGDINPARR 367
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 264/462 (57%), Gaps = 35/462 (7%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
VF + +L WN+II G Q +A+ +F M S + P LT SL A AQ G
Sbjct: 227 VFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMR-DSGVSPDVLTLLSLASAIAQCG 285
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
G +H +V++G + D++A N+++
Sbjct: 286 DICGGRSVHCYMVRRGWDVG-------------------------------DIIAGNAIV 314
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSE 221
AK +I+ ++R+FD M R+ VSWN++I+GY++N EA+ ++ MQ+ + +KP +
Sbjct: 315 DMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQ 374
Query: 222 FTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
T VS+L A + LGA++QG +H + L+ V T +ID+Y KCG + A+ +F
Sbjct: 375 GTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQ 434
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
P++ WN+++ G+ ++G+ +A+ LFS +Q + PD+++F+++L AC+H+G V+Q
Sbjct: 435 TPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQG 494
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
+++F +M Y IKP KHY+CMVD GRAG L++A IR+MP PD+ IWG+LL ACR
Sbjct: 495 RNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACR 554
Query: 402 KHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGC 461
HGN+EM K A++ + ELD YVLMSN+YA +++ E R L++ ++K PG
Sbjct: 555 IHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGW 614
Query: 462 SLIEVDGEVHEFVAGGRL--HPKAPEVYLLLNDLGLLIQEMG 501
S IEV V+ F +G ++ HP+ E+ L DL I+ +G
Sbjct: 615 SSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLG 656
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 173/377 (45%), Gaps = 43/377 (11%)
Query: 52 LFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQP---QRLTYPSLFKAYAQLGLARDGA 108
L + NT+I FS++S PR A+ L +L++SP+ P T+P L +A G A A
Sbjct: 32 LLLANTLISAFSRASLPRLALPLLRHLLLSSPLLPLRPDAFTFPPLLRAAQGPGTA---A 88
Query: 109 QLHGRVVKQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
QLH ++ GL D F +++ Y L F
Sbjct: 89 QLHACALRLGLLRGDAFASGALVHAY----------LRF--------------------- 117
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
G + ++ R FD+M R+ +WN+M+SG RN + EA+ LF M + + T+ S+
Sbjct: 118 -GRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSV 176
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
L C LG +H + V + + V A+ID+Y K G E +VF+ + + L
Sbjct: 177 LPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDL 236
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
WNS++ G G A+++F G++ S + PD ++ +++ +A G + +
Sbjct: 237 VTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCY 296
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
M I + +VD + +E A+++ SMP DA+ W +L++ ++G
Sbjct: 297 MVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVR-DAVSWNTLITGYMQNG--- 352
Query: 408 MAKQAAKQIIELDKNES 424
+A +A + K+E
Sbjct: 353 LASEAIHVYDHMQKHEG 369
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 36/300 (12%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H ++++ G I A + + I A +F + + WNT+I G+ Q
Sbjct: 291 RSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQ 350
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ AI ++ M ++P + T+ S+ AY+ LG + G ++H +K GL D +
Sbjct: 351 NGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVY 410
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ +I +YA CG L EA L+F++ WN++I G+ G
Sbjct: 411 VGTCVIDLYAKCGKLDEAMLLFEQTPRR-STGPWNAVISGVGVHGH-------------- 455
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+AL LF +MQ++ I P T VSLL AC+ G + QG
Sbjct: 456 -----------------GAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFF 498
Query: 245 NFLVTNCFELNTIV--VTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
N + T + + I ++DM+ + G + A +P K + W +++ ++G
Sbjct: 499 NMMQT-AYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHG 557
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/469 (35%), Positives = 276/469 (58%), Gaps = 10/469 (2%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRL-TYPS 93
G + A +F ++ K + +N++I G+ + ++A LF M P++ + L ++ S
Sbjct: 171 GCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVM----PMEQKNLISWNS 226
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ YA+ + +G ++ + ++ + D N++I CG + A +F+++
Sbjct: 227 MISGYAR---SEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMPKR- 282
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM- 212
DVV+W +M+ G AK GEID +R LFD+M R+ +S N+M++GYV+N EAL F +M
Sbjct: 283 DVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDML 342
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+ + P T++ L+A A+LG +G +H ++ N F L+ + A+IDMY KCG
Sbjct: 343 SRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSI 402
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
+ AL VF + K + WN+++ GLA++G A +LF ++ +KPD I+FI VL AC
Sbjct: 403 DNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNAC 462
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
NH+G V + F LM +K++P ++HY CMVD LGRAG +EEA+K + MP +P+ ++
Sbjct: 463 NHAGLVKEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVV 522
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
W +LLSACR H N + + AK +I +D YVL+SN+YA + + R++MK+
Sbjct: 523 WRTLLSACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQ 582
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++K PGCS IE++G VHEF + HP+ E+Y +L+ L L E+
Sbjct: 583 RDLKKIPGCSQIELEGNVHEFFVRDKSHPQVREIYSMLDSLSALNSEVA 631
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 218/450 (48%), Gaps = 56/450 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD--INYAYLVF-------TQIKKPN 51
+ D+ +IH+ LI TG +P +RI+ +S + + +A +F K+ N
Sbjct: 27 LHDVNQIHSRLITTGFINNPSLTTRIILNFSSSSHKPLVEFARYLFMSRHFGRKHRKQDN 86
Query: 52 LFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLH 111
F+WN II+ FS PR A ++F ++++ + + + ++ + KA ++LGL ++G Q+H
Sbjct: 87 PFLWNAIIKSFSHGEDPREAFVIF-NLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIH 145
Query: 112 GRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
G + + + D F+ N ++ +Y CG L AR +FD + + D V++NSMI G K G +
Sbjct: 146 GLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRM-MKRDSVSFNSMIDGYVKHGMV 204
Query: 172 DESRRLFD--KMVSRNTVSWNSMISGYVRNVK-FKEALELFREMQEQNIKPSEFTMVSLL 228
+R LFD M +N +SWNSMISGY R+ + + A ELF EM ++++ + S++
Sbjct: 205 KSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPKRDL----ISWNSMI 260
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+ C K G + + N + + + ++D Y K G + A +F+ +P++ +
Sbjct: 261 DGCVKCGKMENAHHLFNQMPKR----DVVSWANMVDGYAKLGEIDIARGLFDEMPERDVI 316
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQA------ 341
N+M+ G NG+ EA+ F + S L PD + + L+A G ++
Sbjct: 317 SCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCY 376
Query: 342 -KDYFTLMTETYKI-----------------------KPSIKHYSCMVDALGRAGLLEEA 377
+D ++E + SI H++ ++ L GL E A
Sbjct: 377 IEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVA 436
Query: 378 EKLIRSMPS---DPDAIIWGSLLSACRKHG 404
+L M PD I + +L+AC G
Sbjct: 437 FELFMEMEKLFVKPDDITFIGVLNACNHAG 466
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 15/274 (5%)
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N WN++I + +EA +F M E + +F+ +L AC++LG I++G IH
Sbjct: 86 NPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIH 145
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
L + + ++ +Y +CGC A Q+F+ + K+ +NSM+ G +G
Sbjct: 146 GLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVK 205
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK-VNQAKDYFTLMTETYKIKPSIKHYSC 363
A +LF + + + IS+ ++++ S + + A + F M K + ++
Sbjct: 206 SARELFDVMPME--QKNLISWNSMISGYARSEEGLRVAWELFEEMP-----KRDLISWNS 258
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
M+D + G +E A L MP D + W +++ K G I++A+ ++ E D
Sbjct: 259 MIDGCVKCGKMENAHHLFNQMPKR-DVVSWANMVDGYAKLGEIDIARGLFDEMPERDV-I 316
Query: 424 SC-----GYVLMSNLYAASYQFEEAMEERLLMKE 452
SC GYV +L A F + + + L +
Sbjct: 317 SCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPD 350
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 275/501 (54%), Gaps = 35/501 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ LK++H + + ++ + ILA+ + G +N A VF I + WN +I
Sbjct: 367 LRSLKELHGYSFRHCFQHVELSNAFILAY--AKCGALNSAEKVFHGIGDKTVSSWNALIG 424
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G +Q+ PR A+ L M S QP T SL A A L + G ++HG V++ GLE
Sbjct: 425 GHAQNGDPRKALHLLFQM-TYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLE 483
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ +++ Y +CG S A R LFD+
Sbjct: 484 TDFFVGTSLLSHYIHCGKASSA--------------------------------RVLFDR 511
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +N VSWN+MISGY +N E+L LFR+ + I+ E +VS+ AC++L A+R G
Sbjct: 512 MKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLG 571
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ H +++ + V +IIDMY K GC + + +VF+ + K ++ WN+++ ++
Sbjct: 572 KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIH 631
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ EAI+L+ ++ PD ++I +L AC H+G V + YF M I+P ++H
Sbjct: 632 GHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEH 691
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+C++D L RAG L++A +L+ MP + D IW SLL +CR G +E+ ++ AK+++EL+
Sbjct: 692 YACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELE 751
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+++ YVL+SNLYA +++ R +MKE+ ++K+ GCS IEV G V+ FV G L
Sbjct: 752 PDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQ 811
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
PK+ E+ ++ L I E+G
Sbjct: 812 PKSAEIRVIWRRLEERISEIG 832
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 190/404 (47%), Gaps = 46/404 (11%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH +IK GL D + ++ G ++ A VF + + NL WN++I FS++
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGM-YGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENG 226
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
R++ L ++ML + P +T ++ A G G +HG VK GL + ++
Sbjct: 227 FSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVN 286
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N ++YMY+ CG+L+EA++ F + + + +VV+WN+MI + G+++E+ L +M
Sbjct: 287 NAMVYMYSKCGYLNEAQMSFVKNNNK-NVVSWNTMISAFSLEGDVNEAFNLLQEM----- 340
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
++Q + +K +E T++++L AC +R + +H +
Sbjct: 341 ------------------------QIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGY 376
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+CF+ + + A I Y KCG A +VF+ + K +S WN+++ G A NG +A
Sbjct: 377 SFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKA 435
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF------TLMTETYKIKPSIKH 360
+ L + S +PD+ + ++L AC H + K+ L T+ + + H
Sbjct: 436 LHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSH 495
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
Y G A L M D + + W +++S ++G
Sbjct: 496 YI-------HCGKASSARVLFDRMK-DKNLVSWNAMISGYSQNG 531
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 175/387 (45%), Gaps = 48/387 (12%)
Query: 25 RILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPI 84
++ A C SP + LVF ++ NL WN ++ G++++ + + +F+D++ +
Sbjct: 87 KMYAMCGSPLD----SRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDF 142
Query: 85 QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL 144
QP T+PS+ KA + R G +HG V+K GL D F+ N ++ MY CG + EA
Sbjct: 143 QPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMK 202
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+FD + E ++V+WNSMI ++ +G+ R +
Sbjct: 203 VFDFM-PETNLVSWNSMICAFSE--------------------------NGFSR-----D 230
Query: 205 ALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
+ +L EM E+ + P T+V++L CA G + G IH V +V A++
Sbjct: 231 SFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMV 290
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS--GLQSSNLKPD 321
MY KCG A F K + WN+M+ ++ G NEA L +Q +K +
Sbjct: 291 YMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKAN 350
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY---SCMVDALGRAGLLEEAE 378
++ + VL AC ++ K+ Y + +H + + A + G L AE
Sbjct: 351 EVTILNVLPACLDKLQLRSLKEL-----HGYSFRHCFQHVELSNAFILAYAKCGALNSAE 405
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGN 405
K+ + D W +L+ ++G+
Sbjct: 406 KVFHGI-GDKTVSSWNALIGGHAQNGD 431
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 137/270 (50%), Gaps = 6/270 (2%)
Query: 143 RLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKF 202
+ + D D V +I A CG +SR +FD M ++N + WN+++SGY RN +
Sbjct: 67 KFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLY 126
Query: 203 KEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTA 261
+ +++F ++ + + +P FT S++ AC + +R GE IH ++ L+ V A
Sbjct: 127 GDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNA 186
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLF-SGLQSSNLKP 320
++ MY KCG + A++VF+ +P+ L WNSM+ + NG+ ++ L L L P
Sbjct: 187 LVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLP 246
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE-K 379
D ++ + +L C G+V+ L + + + + MV + G L EA+
Sbjct: 247 DVVTVVTILPVCAGEGEVDIGMGIHGLAVK-LGLSEEVMVNNAMVYMYSKCGYLNEAQMS 305
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+++ ++ + + W +++SA G++ A
Sbjct: 306 FVKN--NNKNVVSWNTMISAFSLEGDVNEA 333
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/503 (32%), Positives = 269/503 (53%), Gaps = 40/503 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IHA +K G A+ LA + G + Y +F ++ ++ W TII Q
Sbjct: 237 REIHAQAMKKGFDVSSFVAN-TLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQ 295
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ FI M S + P T+ ++ A L G QLH ++ GL
Sbjct: 296 MGQEECAVQAFIRMR-ESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLS 354
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N+I+ MYA KCG++ S +F +M R
Sbjct: 355 VENSIMTMYA--------------------------------KCGQLTSSSVIFHEMTRR 382
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSW+++I+GY + EA EL M+ + KP+EF + S+L+AC + + G+ +H
Sbjct: 383 DIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLH 442
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++++ E +V++A+I+MYCKCG E A ++F+ + W +M+ G A +GY
Sbjct: 443 AYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSR 502
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
E I LF + L+PD ++FI VL+AC+H+G V+ YF M++ Y+I PS +HY CM
Sbjct: 503 EVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCM 562
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
+D L RAG L +AE +I +MP D ++W +LL ACR HG++E ++ A++I++L+ N +
Sbjct: 563 IDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCA 622
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
++ ++N+YA+ ++ EA + R LMK + KEPG S I+V V FVAG R HP+
Sbjct: 623 GTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGE 682
Query: 485 EVYLLLN------DLGLLIQEMG 501
++Y +L+ +L +QE G
Sbjct: 683 DIYNMLDLLASRTELADCVQETG 705
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 170/378 (44%), Gaps = 40/378 (10%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A +F ++ + + W T+I G+ ++ A+LLF +M V S + R+ L
Sbjct: 63 GHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGL---RIDPFIL 119
Query: 95 FKAYAQLGLARD---GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
A+ GL D G LHG VK GL F+ + ++ MY
Sbjct: 120 SLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYT----------------- 162
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
K G+I E RR+F +M RN VSW ++I+G VR KEAL F E
Sbjct: 163 ---------------KNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSE 207
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M ++ +T L ACA GA+ G IH + F++++ V + MY KCG
Sbjct: 208 MWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGK 267
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
E L +F + + + W +++ L G E A++ F ++ S++ P+ +F AV++
Sbjct: 268 LEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISG 327
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C + ++ + L+ + S+ + ++ + G L + + M + D +
Sbjct: 328 CANLARIEWGEQLHALILH-LGLAASLSVENSIMTMYAKCGQLTSSSVIFHEM-TRRDIV 385
Query: 392 IWGSLLSACRKHGNIEMA 409
W ++++ + G++ A
Sbjct: 386 SWSTIIAGYSQGGHVSEA 403
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 5/272 (1%)
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
++ D+ N + L K G + +RR+FDKM ++ +SW ++ISGYV EAL LF+
Sbjct: 45 SQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFK 104
Query: 211 EMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
M+ E ++ F + AC + GE +H + V + V +A++DMY K
Sbjct: 105 NMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKN 164
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G +VF+ +P + + W +++ GL GY EA+ FS + S ++ D +F L
Sbjct: 165 GKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIAL 224
Query: 330 TACNHSGKVNQAKD-YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
AC SG +N ++ + M + + + + + + + G LE L M S
Sbjct: 225 KACADSGALNYGREIHAQAMKKGFDVSSFVA--NTLATMYNKCGKLEYGLTLFEKM-SMR 281
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
D + W ++++ + G E A QA ++ E D
Sbjct: 282 DVVSWTTIITTLVQMGQEECAVQAFIRMRESD 313
>gi|222625417|gb|EEE59549.1| hypothetical protein OsJ_11827 [Oryza sativa Japonica Group]
Length = 379
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/396 (39%), Positives = 225/396 (56%), Gaps = 34/396 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M L+++HA L+K+GLA+DPIAASR +AFC D YA + +PN F+WNT IR
Sbjct: 1 MAHLRQLHAALVKSGLARDPIAASRAVAFCAGDGRDAAYAARLVRHHPRPNAFMWNTAIR 60
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ P A+ LF T P R G QL GL
Sbjct: 61 ALADGPGPGAAVALF----ATGPGS-------------------RHGGQL-------GLG 90
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ N++I MYA+ G EA + + FD VA NS I+ LA+ G +DE+R +FD
Sbjct: 91 GDAYVRNSVIAMYASRGAADEAIALLARCEA-FDAVACNSAIVALARAGRVDEARAVFDG 149
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M +R +W++M+S Y R+ + +A+ELF MQ + ++P+ +VS+L CA LGA+ QG
Sbjct: 150 MPARTVATWSAMVSAYSRDSRCHDAVELFSAMQAEGVEPNANVLVSVLGCCASLGALEQG 209
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG---LSCWNSMVFGL 297
W+H ++ + +N +VVTA++DMYCKCG +A +VF+ +G LS WNSM+ G
Sbjct: 210 AWVHAYIDKHDVAMNALVVTALVDMYCKCGDIRKAREVFDASRSRGQAKLSSWNSMMLGH 269
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
A++G EA LFS L+ L+PD ++FIA+L A HSG ++AK M + + P
Sbjct: 270 AVHGQWREAAALFSELRPHGLRPDNVTFIAILMAYGHSGMADEAKAVLASMASEHGVVPG 329
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
++HY C+VDAL RAG L EAE I +MP + W
Sbjct: 330 VEHYGCLVDALARAGRLREAEGAIAAMPVTAKKLRW 365
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/411 (38%), Positives = 244/411 (59%), Gaps = 4/411 (0%)
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR 143
I P + L +A R + H R+++ G + I ++I Y NC L+ A
Sbjct: 7 ILPDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAY 66
Query: 144 LMFDEV-DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKF 202
+ +V + N +I + GE + ++++F KM R+ V+WNSMI GYVRN KF
Sbjct: 67 QVIRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKF 126
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAI 262
+EAL F+ M N++P +FT S++ ACA+LGA+ +W+H+ +V E+N I+ +A+
Sbjct: 127 EEALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFILSSAL 186
Query: 263 IDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
IDMY KCG E A +VF +V + +S WNS++ GLA++G +A+ +FS +++ N+ PD
Sbjct: 187 IDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDS 246
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
++F+ +L AC+H G V + + YF LM Y IKP ++HY MVD LGRAGLL+EA +I
Sbjct: 247 LTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMIT 306
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEE 442
+MP +PD I+W LLSACR H N E+ + A I +S YVL+SN+Y + +++
Sbjct: 307 AMPMEPDVIVWRILLSACRTHRNTELGEVAVANI---SGPKSGDYVLLSNIYCSQNRWDN 363
Query: 443 AMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
A E R +MKE + K G S E + VH F AG + HP+ +Y +L L
Sbjct: 364 AQEVREMMKEEGVRKRRGKSWFEWEDVVHRFRAGDKSHPETEALYKILEGL 414
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 118/251 (47%), Gaps = 36/251 (14%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G+ A VF ++ ++ WN++I G+ ++ A+ F ML +S ++P + T+ S+
Sbjct: 93 GEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAML-SSNVEPDKFTFASV 151
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A A+LG LH +V++ +E + + + +I MY+ CG + A+ +F+ V+ D
Sbjct: 152 ITACARLGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERN-D 210
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V WNS+I GLA G +A+ +F +M+
Sbjct: 211 VSVWNSLINGLAVHGLA-------------------------------LDAMMVFSKMEA 239
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCP 272
+N+ P T + +L AC+ G +++G + L+ N + + + A++D+ + G
Sbjct: 240 ENVLPDSLTFLGILKACSHCGLVKEGRKYFD-LMENYYSIKPQLEHYGAMVDLLGRAGLL 298
Query: 273 ERALQVFNTVP 283
+ A + +P
Sbjct: 299 DEAYAMITAMP 309
>gi|326530063|dbj|BAK08311.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 490
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 262/413 (63%), Gaps = 9/413 (2%)
Query: 86 PQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQFIHNTIIYMYANCGFLSEARL 144
P LT+P L +A A+L R LH ++ GL +D ++ N++++MYA C AR
Sbjct: 58 PSHLTFPFLGRAAARLASPRLALSLHAHPLRLGLLPWDLYVANSLVHMYAACALPDLARR 117
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+FDE+ ++V+WN+++ G AKC ++ +R +F++M R+ VSW++MI G V+ + +E
Sbjct: 118 LFDEIPRP-NLVSWNALLDGYAKCRDLLSARCVFNRMPQRDVVSWSAMIDGCVKCGEHRE 176
Query: 205 ALELFREMQE----QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
AL LF M+ ++ ++ TMVS+L ACA LG + +G +H +L + F LN + T
Sbjct: 177 ALALFEMMEAAGAGNGVRANDVTMVSVLGACAHLGDLGRGRQMHRYLQEHGFLLNLRLAT 236
Query: 261 AIIDMYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
+++DMY KCG AL+VF VP + WN+++ GLA++G E++++F +Q+S +
Sbjct: 237 SLVDMYAKCGAISEALEVFRAVPVTTTDVLIWNAVIGGLAVHGLSMESVEIFQEMQNSGV 296
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
PD I+++ +L+AC H G V +A F + E ++P ++HY+C+VD LGRAG LEEA
Sbjct: 297 VPDEITYLVLLSACVHGGLVGEAWRLFRSL-EVQGLRPHVEHYACLVDVLGRAGHLEEAY 355
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASY 438
+++SMP +P+ + G+LL+AC HG +E+ + +Q+++L + Y+ +SN+YA +
Sbjct: 356 GVVKSMPMEPNVSVLGALLNACHLHGWVELGEVVGRQLVQLQPDHDGRYIGLSNIYAIAR 415
Query: 439 QFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLN 491
+++EA + R +M+E ++K PG S I+V G +H F+A + H + E+Y LLN
Sbjct: 416 RWQEAKKARKVMEERGVKKIPGFSEIDVGGRLHRFIAHDKAHSGSREIYALLN 468
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 143/352 (40%), Gaps = 69/352 (19%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ-- 64
+HAH ++ GL + + L + + A +F +I +PNL WN ++ G+++
Sbjct: 82 LHAHPLRLGLLPWDLYVANSLVHMYAACALPDLARRLFDEIPRPNLVSWNALLDGYAKCR 141
Query: 65 ---------SSTP--------------------RNAILLFIDMLVTSP---IQPQRLTYP 92
+ P R A+ LF M ++ +T
Sbjct: 142 DLLSARCVFNRMPQRDVVSWSAMIDGCVKCGEHREALALFEMMEAAGAGNGVRANDVTMV 201
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD-T 151
S+ A A LG G Q+H + + G + + +++ MYA CG +SEA +F V T
Sbjct: 202 SVLGACAHLGDLGRGRQMHRYLQEHGFLLNLRLATSLVDMYAKCGAISEALEVFRAVPVT 261
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
DV+ WN++I GLA G SM E++E+F+E
Sbjct: 262 TTDVLIWNAVIGGLAVHGL--------------------SM-----------ESVEIFQE 290
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ + P E T + LL+AC G + + + L + ++D+ + G
Sbjct: 291 MQNSGVVPDEITYLVLLSACVHGGLVGEAWRLFRSLEVQGLRPHVEHYACLVDVLGRAGH 350
Query: 272 PERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
E A V ++P + +S +++ ++G+ + G Q L+PD+
Sbjct: 351 LEEAYGVVKSMPMEPNVSVLGALLNACHLHGWVE--LGEVVGRQLVQLQPDH 400
>gi|297597505|ref|NP_001044065.2| Os01g0715700 [Oryza sativa Japonica Group]
gi|255673627|dbj|BAF05979.2| Os01g0715700 [Oryza sativa Japonica Group]
Length = 699
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 286/514 (55%), Gaps = 20/514 (3%)
Query: 2 KDLKKIHAHLIKTGLAKDP------IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIW 55
+ L++IHAHL+ +G P +A+ + GD++YA L+ + + L
Sbjct: 100 RHLREIHAHLLVSGRIASPSHLAAFLASLASSSSDDDDDGDLSYARLLLPR-RPATLLAH 158
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG-------- 107
N+++R ++ P A F D+ P+ P ++ L +A L A
Sbjct: 159 NSLLRALARGRRPHLAFGAFRDL----PLAPDNYSFTFLVRAATALAAAAASALDAALIA 214
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
+H ++ G D + + + MYA G + AR F E+ + DVV +M+ LA
Sbjct: 215 GSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASP-DVVCVTAMVGALAT 273
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
GE D +R LFD M R+ V+WN+MI+GYV + +EAL LF EM+ E T+VS
Sbjct: 274 GGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSA 333
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
L ACA+LGA+ +G+W+H+ + L+ + TA+IDMY KCG A++VF+++ ++ +
Sbjct: 334 LTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNV 393
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
W S V GLAMNG + + LF ++S+ ++P+ ++F+ VL C+ +G V++ + F
Sbjct: 394 YTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDS 453
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
M + I P ++HY CMVD GRAG L++A I MP +P +WG+LL+A R H N+E
Sbjct: 454 MKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVE 513
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
+ K A +++ ++ +VL+SN+YA S ++ R +MK ++K PGCS IEV
Sbjct: 514 LGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVG 573
Query: 468 GEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G+VHEF GG+ HP+ E+ ++L ++ ++ G
Sbjct: 574 GKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQG 607
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 272/498 (54%), Gaps = 37/498 (7%)
Query: 5 KKIHAHLIKTGLAKDP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+ IHAHL ++ LA D + S I +C G ++ A VF ++ ++ W +I G++
Sbjct: 80 RAIHAHLSRSCLAGDAFLLNSLIHMYCK--CGAVSDARHVFDKMPSRDVVSWTYLIAGYA 137
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
Q+ P AI L DML + +P T+ SL KA G G Q+H VK + D
Sbjct: 138 QNYMPAEAIGLLPDML-RARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDV 196
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
++ + ++ MYA +C ++D + +FD++VS
Sbjct: 197 YVGSALLDMYA--------------------------------RCEQMDMAIMVFDRLVS 224
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+N VSWN++I+G+ R + L F EMQ + FT S+ +A A++GA+ QG W+
Sbjct: 225 KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWV 284
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H L+ + +L V ++ MY K G A +VF+ + K+ L WN+M+ LA G
Sbjct: 285 HAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLG 344
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ F ++ ++ + I+F++VLTAC+H G V + K YF +M + Y ++P I HY
Sbjct: 345 KEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYVS 403
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
VD LGRAGLL+EA + MP +P A +WG+LL ACR H N +M + AA + ELD ++
Sbjct: 404 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDD 463
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
+ VL+ N+YA++ ++ +A R +MK ++KEP CS ++++ VH FVA HPK+
Sbjct: 464 TGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKS 523
Query: 484 PEVYLLLNDLGLLIQEMG 501
++Y + ++ + I++ G
Sbjct: 524 GDIYRMWEEINMRIKKAG 541
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 176/402 (43%), Gaps = 49/402 (12%)
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
SS + L +D+L + P Y S+ A AQ +H + + L D F
Sbjct: 37 SSPASSTGLRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAF 96
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I+MY CG +S+AR +FD++ + DVV+W
Sbjct: 97 LLNSLIHMYCKCGAVSDARHVFDKMPSR-DVVSW-------------------------- 129
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+I+GY +N EA+ L +M +P+ FT SLL A G GE +H
Sbjct: 130 -----TYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMH 184
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
V ++ + V +A++DMY +C + A+ VF+ + K WN+++ G A
Sbjct: 185 ALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGE 244
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK-DYFTLMTETYKIKPSIKHYSC 363
+ F+ +Q + + ++ ++ +A G + Q + + L+ K+ + +
Sbjct: 245 TTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVG--NT 302
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
M+ ++G + +A K+ M D + W ++L+A ++G + K+A E+ K
Sbjct: 303 MLGMYAKSGSMVDARKVFDRM-DKRDLVTWNTMLTALAQYG---LGKEAVAHFEEIRK-- 356
Query: 424 SCGYVL-----MSNLYAASYQ--FEEAMEERLLMKEVKIEKE 458
CG L +S L A S+ +E +MK+ ++ E
Sbjct: 357 -CGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPE 397
>gi|242049708|ref|XP_002462598.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
gi|241925975|gb|EER99119.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
Length = 655
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 251/430 (58%), Gaps = 3/430 (0%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
I+ A VF +I + + W T+I G+ + +A+ ++ M+ + L K
Sbjct: 226 IDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAYVQMVGEVGANDHEVLLVDLMK 285
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A+ +G QLH ++K G + F+ T+++ Y CG + A++ F D
Sbjct: 286 ACARYSAITEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMAFKLSDKSH-TA 344
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WN+++ L + G I E+R LFD M R+TVSW++MISGYV+ + ALELF M +
Sbjct: 345 SWNALLAALLRKGLIHEARELFDDMPERDTVSWSTMISGYVQTGRSDMALELFYSMLNTS 404
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
++P+E T+ S L+A A G + QG+WIH+ ++ +L + +IDMY K G A+
Sbjct: 405 VEPNEVTLASALSAIADSGTLDQGKWIHDHIMNRPIQLTDNLSAGLIDMYAKRGSVADAV 464
Query: 277 QVFNTVPKK--GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
Q FN K +S WN+M+ LA++GY + ++ LFS LQ +++KP+ I+FI VL+AC H
Sbjct: 465 QFFNCASDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACCH 524
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+G V + K YF MT Y I+P+IKHY CMVD LGRAG LEEAE+L+ MP D +IWG
Sbjct: 525 TGMVAKGKYYFEAMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVSMMPMKADVVIWG 584
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
S+LSA R GNI + ++AA+++ +LD+ V +SN+YA + + R +++
Sbjct: 585 SILSAARAQGNIALGEKAAEELAKLDQTHGASKVALSNIYADAGHWTNVSVVRKELQDEN 644
Query: 455 IEKEPGCSLI 464
E+ G S I
Sbjct: 645 FERLVGRSGI 654
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 175/364 (48%), Gaps = 11/364 (3%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIKK--PNLFIWNTIIRGFSQSSTPRNAILLF 75
+D A + +LA T AG ++ A + ++ + + + T++ +++ A+ +F
Sbjct: 74 RDTAARNSVLAALTR-AGHLDRAQRLLDEMPRVHRDAVSYTTLVTALARAGHAGRAVAVF 132
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
ML + + P +T A+A+ G +HG +K+ L+ + +++ YA
Sbjct: 133 RGML-SENVVPNEVTLAGAIMAFARCGAPATVGMIHGFALKRALDGFVIVATNLVHAYAG 191
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
L AR MFD + T + V WN+M+ G K ID + +F ++ R+ VSW ++I G
Sbjct: 192 VLELYSARAMFDGM-THRNAVTWNAMLNGYVKAEMIDMAAEVFWRIPERDEVSWLTLIDG 250
Query: 196 YVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFEL 254
Y+ +A++ + +M E E +V L+ ACA+ AI +G+ +H ++ N F+
Sbjct: 251 YICADLISDAMKAYVQMVGEVGANDHEVLLVDLMKACARYSAITEGQQLHTVILKNGFDA 310
Query: 255 NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ 314
+ V ++ Y CG A F K + WN+++ L G +EA +LF +
Sbjct: 311 HAFVQATLVHFYGCCGLIGLAQMAFKLSDKSHTASWNALLAALLRKGLIHEARELFDDMP 370
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
+ D +S+ +++ +G+ + A + F M T ++P+ + + A+ +G L
Sbjct: 371 ----ERDTVSWSTMISGYVQTGRSDMALELFYSMLNT-SVEPNEVTLASALSAIADSGTL 425
Query: 375 EEAE 378
++ +
Sbjct: 426 DQGK 429
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 160/385 (41%), Gaps = 68/385 (17%)
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQFIHNTIIYMYANC-GFLSEARLMFDEV 149
P L + + R G QLH K GL + F+ N+++ Y+ L+ A +FDE
Sbjct: 10 PFLVASLKRAARLRCGEQLHALAAKSGLLACNAFVRNSVLSFYSRLPSSLASALQLFDET 69
Query: 150 DTEF-DVVAWNSMIIGLAKCGEIDESRRLFDKM--VSRNTVSWNSMISGYVRNVKFKEAL 206
D A NS++ L + G +D ++RL D+M V R+ VS+ ++++ R A+
Sbjct: 70 PAPLRDTAARNSVLAALTRAGHLDRAQRLLDEMPRVHRDAVSYTTLVTALARAGHAGRAV 129
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT------ 260
+FR M +N+ P+E T+ + A A+ GA IH F + + IV T
Sbjct: 130 AVFRGMLSENVVPNEVTLAGAIMAFARCGAPATVGMIHGFALKRALDGFVIVATNLVHAY 189
Query: 261 -------------------------AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A+++ Y K + A +VF +P++ W +++
Sbjct: 190 AGVLELYSARAMFDGMTHRNAVTWNAMLNGYVKAEMIDMAAEVFWRIPERDEVSWLTLID 249
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDY-ISFIAVLTACNHSGKVNQAKDYFTLMTE---- 350
G ++A+K + + D+ + + ++ AC + + + T++ +
Sbjct: 250 GYICADLISDAMKAYVQMVGEVGANDHEVLLVDLMKACARYSAITEGQQLHTVILKNGFD 309
Query: 351 ------------------------TYKI--KPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
+K+ K ++ ++ AL R GL+ EA +L M
Sbjct: 310 AHAFVQATLVHFYGCCGLIGLAQMAFKLSDKSHTASWNALLAALLRKGLIHEARELFDDM 369
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMA 409
P + D + W +++S + G +MA
Sbjct: 370 P-ERDTVSWSTMISGYVQTGRSDMA 393
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 274/506 (54%), Gaps = 42/506 (8%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
++KKIH L+K GL D S L G + A VF ++ ++ +WN +I G+
Sbjct: 128 EVKKIHGCLLKMGLELDVFVGSA-LVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGY 186
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
++ A+ +F M V + P R T + +A G +G +HG V+K G +
Sbjct: 187 AKIGCLDEALEVFRRMHVKG-VAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSG 245
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ N +I MY C + +A ++F+ ++ E D+ +WNS+I +CG+ D + RLFDKM+
Sbjct: 246 VSVSNALIDMYGKCKHIGDALIIFEMIN-EKDIFSWNSIISVHEQCGDHDGTLRLFDKML 304
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
I P T+ ++L AC+ L A+ G
Sbjct: 305 G-------------------------------SGILPDLVTITTVLPACSHLAALMHGRE 333
Query: 243 IHNFLVTNCFEL--------NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
IH +++ N N +V A++DMY KCG AL++F+++ KK ++ WN M+
Sbjct: 334 IHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMI 393
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G M+GY EA+ +FS + + KP+ ++ + VL+ACNH+G V+ + + M T+ +
Sbjct: 394 MGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGV 453
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P+I+HY+C++D LGRAG LE+A ++++ MP + ++W +LL ACR HGN E+A+ AA+
Sbjct: 454 IPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAAR 513
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
Q+++L+ YVLMSN+Y ++EE +E R MKE ++K PGCS IE+ VH F
Sbjct: 514 QVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFR 573
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEM 500
G R H + + L D+G ++ E+
Sbjct: 574 TGDRTHSELNALTNQLCDIGFILDEV 599
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 183/408 (44%), Gaps = 46/408 (11%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQ-IKKPNLFIWNTIIRGFS 63
K++H+ +I G + P + + ++ S G + A LVF + N+F +N II GF
Sbjct: 31 KQLHSLMITYGFSPSPPSITSLINM-YSKCGQMGEAILVFYDPCHERNVFAYNAIISGFV 89
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ + M + + P + T+P + + ++ + ++HG ++K GLE D
Sbjct: 90 SNGLASKGFQFYKKMRLEG-VMPDKYTFPCVVRTCCEVMEVK---KIHGCLLKMGLELDV 145
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ + ++ Y K G +++++++F ++
Sbjct: 146 FVGSALVNTYL--------------------------------KNGSMEDAQKVFGELSI 173
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ V WN+MI+GY + EALE+FR M + + PS FT+ +L+ A G + G+ +
Sbjct: 174 RDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTV 233
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++ ++ V A+IDMY KC AL +F + +K + WNS++ G
Sbjct: 234 HGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDH 293
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT-------ETYKIKP 356
+ ++LF + S + PD ++ VL AC+H + ++ M +
Sbjct: 294 DGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVD 353
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
++ + ++D + G + A K+ SM S D W ++ HG
Sbjct: 354 NLLVSNAVMDMYAKCGSMNNALKIFDSM-SKKDVASWNIMIMGYGMHG 400
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 136/300 (45%), Gaps = 38/300 (12%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G QLH ++ G ++I MY+ CG + EA L+F + E +V A+N
Sbjct: 30 GKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYN------- 82
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
++ISG+V N + + +++M+ + + P ++T
Sbjct: 83 ------------------------AIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPC 118
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
++ C ++ +++ IH L+ EL+ V +A+++ Y K G E A +VF + +
Sbjct: 119 VVRTCCEVMEVKK---IHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRD 175
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YF 345
+ WN+M+ G A G +EA+++F + + P + +L+ G ++ K +
Sbjct: 176 VVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHG 235
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+M Y S+ + ++D G+ + +A +I M ++ D W S++S + G+
Sbjct: 236 IVMKMGYDSGVSVS--NALIDMYGKCKHIGDA-LIIFEMINEKDIFSWNSIISVHEQCGD 292
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 98/193 (50%), Gaps = 6/193 (3%)
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF-NTVP 283
V+ L +CA + +G+ +H+ ++T F + +T++I+MY KCG A+ VF +
Sbjct: 15 VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCH 74
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
++ + +N+++ G NG ++ + + ++ + PD +F V+ C +V +
Sbjct: 75 ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKKIHG 134
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
M ++ + S +V+ + G +E+A+K+ + S D ++W ++++ K
Sbjct: 135 CLLKM----GLELDVFVGSALVNTYLKNGSMEDAQKVFGEL-SIRDVVLWNAMINGYAKI 189
Query: 404 GNIEMAKQAAKQI 416
G ++ A + +++
Sbjct: 190 GCLDEALEVFRRM 202
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 264/477 (55%), Gaps = 35/477 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ H+ + K L DP ++ S G + +A VF +I + +L WN++I G+++
Sbjct: 136 RAAHSLVFKLALHSDPHTTHSLITM-YSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAK 194
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ R A+ +F +M +P ++ S+ A +LG G + G VV++G+ + +
Sbjct: 195 AGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSY 254
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I + +I MYA KCG++ +RR+FD M +R
Sbjct: 255 IGSALISMYA--------------------------------KCGDLGSARRIFDGMAAR 282
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ ++WN++ISGY +N EA+ LF M+E + ++ T+ ++L+ACA +GA+ G+ I
Sbjct: 283 DVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQID 342
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ F+ + V TA+IDMY KCG A +VF +P+K + WN+M+ LA +G
Sbjct: 343 EYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAK 402
Query: 305 EAIKLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
EA+ LF + + +P+ I+F+ +L+AC H+G VN+ F +M+ + + P I+HYS
Sbjct: 403 EALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYS 462
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD L RAG L EA LI MP PD + G+LL ACR N+++ ++ + I+E+D +
Sbjct: 463 CMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPS 522
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
S Y++ S +YA +E++ RLLM++ I K PGCS IEV+ +HEF AG L
Sbjct: 523 NSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGL 579
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 195/414 (47%), Gaps = 47/414 (11%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIK-KPNLFIWNTIIR 60
K L+++HA ++ P + L + YA L+F+ I PN + +N +IR
Sbjct: 32 KTLQQVHAQMVVKSSIHSP---NNHLLSKAIHLKNFTYASLLFSHIAPHPNDYAFNIMIR 88
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ + L +++ + P T+P F + A L + H V K L
Sbjct: 89 ALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALH 148
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D +++I MY+ CG ++ AR +FDE+ D+V+WNSMI G AK G
Sbjct: 149 SDPHTTHSLITMYSRCGRVAFARKVFDEIPRR-DLVSWNSMIAGYAKAGCA--------- 198
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-IKPSEFTMVSLLNACAKLGAIRQ 239
+EA+E+F EM ++ +P E ++VS+L AC +LG +
Sbjct: 199 ----------------------REAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLEL 236
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G W+ F+V LN+ + +A+I MY KCG A ++F+ + + + WN+++ G A
Sbjct: 237 GRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQ 296
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG +EAI LF ++ + + I+ AVL+AC G ++ K + Y + +
Sbjct: 297 NGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQ-----IDEYASQRGFQ 351
Query: 360 H----YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
H + ++D + G L A+++ + MP +A W +++SA HG + A
Sbjct: 352 HDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEA-SWNAMISALASHGKAKEA 404
>gi|23617093|dbj|BAC20776.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
Length = 681
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 239/395 (60%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G+ +H VK G D F+ N +++ Y G + R +FDE+ DV+ WN ++ G
Sbjct: 165 GSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYV 224
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
+ G + +R +FD+M R+ +SW++++ GYV+ + + AL +FR M EQ ++P++ +V+
Sbjct: 225 RAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVT 284
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
L+A A+LG + G+++HN + + + V A++DMY KCGC A +VF+ + ++
Sbjct: 285 ALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRD 344
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
+ WN+M+ GLA +G +A++LF S L P ++F+ VL C+ SG V + + YF
Sbjct: 345 VFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFK 404
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI 406
L+ E Y+I+P ++HY CMVD LGRAGL+ EA +LI M PD ++WG++LS+C+ HG +
Sbjct: 405 LIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLV 464
Query: 407 EMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
++ ++IELD S YVL+S +YA + +++E E R LM K G SL+E
Sbjct: 465 DLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEA 524
Query: 467 DGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G+VH+F+ G H + ++Y L+ + + E G
Sbjct: 525 HGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAG 559
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 66/306 (21%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
AG + A VF ++ + W+T++ G+ + A+ +F +M V ++P + +
Sbjct: 226 AGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM-VEQGVRPNQAAVVT 284
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
A A+LGL G +H V + G+ + ++ MYA CG ++ AR +FD +
Sbjct: 285 ALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRR- 343
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
DV AWN+MI GLA G ++A+ELF
Sbjct: 344 DVFAWNAMICGLAAHG-------------------------------LGRDAVELFERFI 372
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ + P+ T V +LN C++ G + +G +V
Sbjct: 373 SEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIV------------------------- 407
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+ + P+ + + MV L G EAI+L G+ ++ PD + + +L++C
Sbjct: 408 ---EKYRIEPE--MEHYGCMVDLLGRAGLVPEAIELIEGM---HIAPDPVLWGTILSSCK 459
Query: 334 HSGKVN 339
G V+
Sbjct: 460 THGLVD 465
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 284/495 (57%), Gaps = 39/495 (7%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H +I+ GL +D + ++ + G + A VF +I + +L WN++I G+S+
Sbjct: 150 HCSVIRRGLDEDGHVSHSLITM-YARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRH 208
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
A+ LF +M+ + QP ++ S+ A +LG + G + VV+ + + F+ +
Sbjct: 209 AGEAVGLFREMM-EAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGS 267
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
+I+MY KCG++ +RR+FD M ++ V
Sbjct: 268 ALIHMYG--------------------------------KCGDLVSARRIFDSMKKKDKV 295
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
+WN+MI+GY +N +EA++LF++M+ + P + T++ +L+ACA +GA+ G+ + +
Sbjct: 296 TWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYA 355
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
F+ + V TA++DMY KCG + A +VF +PKK WN+M+ LA +G EA+
Sbjct: 356 SERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEAL 415
Query: 308 KLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
LF + + + P+ I+F+ VL+AC H+G V++ + F +M+ ++ + P I+HYSCMV
Sbjct: 416 ALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMV 475
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D RAG LEEA + +MP PD +I G+LL AC+K NI+++++ K ++EL+ + S
Sbjct: 476 DLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSG 535
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YV+ S LYA +++++ R+LMK+ + K PGCS I+++ ++HEF AG LH + E
Sbjct: 536 NYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIE 595
Query: 486 VYLLLNDLGLLIQEM 500
++ +L+ LLI ++
Sbjct: 596 IHQILD---LLIDDL 607
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 210/409 (51%), Gaps = 39/409 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K LK+IHA L+ + K +I + D YA + F+ I P + +N +IR
Sbjct: 45 IKQLKQIHAQLLTNSIHKPNSFLYKI-----ADLKDFAYASVFFSNILDPTEYSFNVMIR 99
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G S + + L F + ++P LTYP LF A + L +G H V+++GL+
Sbjct: 100 GLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLD 159
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + +++I MYA +CG++ ++R++FD+
Sbjct: 160 EDGHVSHSLITMYA--------------------------------RCGKMGDARKVFDE 187
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ ++ VSWNSMISGY + EA+ LFREM E +P+E ++VS+L AC +LG ++ G
Sbjct: 188 ISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLG 247
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
W+ F+V N LN + +A+I MY KCG A ++F+++ KK WN+M+ G A N
Sbjct: 248 TWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQN 307
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EAIKLF ++ S+ PD I+ I +L+AC G ++ K +E + +
Sbjct: 308 GMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASER-GFQDDVYV 366
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ +VD + G L+ A ++ MP + + W +++SA HG + A
Sbjct: 367 GTALVDMYAKCGSLDNAFRVFYGMPK-KNEVSWNAMISALAFHGQAQEA 414
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/420 (37%), Positives = 253/420 (60%), Gaps = 6/420 (1%)
Query: 75 FIDMLVTSPIQPQRLTYPSLFKAYAQL--GLARDGAQLHGRVVKQGLEFDQFIHNT-IIY 131
F DM + ++P +T+ +L G G LHG K GL+ + T I+
Sbjct: 6 FSDMRF-AGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILG 64
Query: 132 MYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNS 191
MY+ G +ARL+FD ++ + + V WN+MI G + G+++ + +LFD+M++R+ +SW +
Sbjct: 65 MYSKRGRFRKARLIFDYMEDK-NSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTA 123
Query: 192 MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
M++G+V+ +EAL FREMQ +KP +++ L AC LGA+ G WIH ++++
Sbjct: 124 MVNGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQD 183
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
F+ N V ++ID+YC+CGC E A QVF+ + K+ + WNS++ G A NG +E++ F
Sbjct: 184 FKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLFYFR 243
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA 371
+Q KPD ++F LTAC+H G V + YF M Y+I P I+HY C+VD RA
Sbjct: 244 KMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYSRA 303
Query: 372 GLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAKQAAKQIIELDKNESCGYVLM 430
G LE+A K+++SMP P+ ++ GSLL+AC+ HG N +A++ K + +L+ YV++
Sbjct: 304 GRLEDALKVVQSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSHSNYVIL 363
Query: 431 SNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLL 490
SN+YAA ++E A + R MK + ++K+PG S IE+D H F+AG H + + +L
Sbjct: 364 SNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDECTHVFMAGDSAHVETANIREIL 423
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 125/311 (40%), Gaps = 65/311 (20%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL + + + S G A L+F ++ N WNT+I G+ +S
Sbjct: 42 LHGYACKLGLDRTHVMVGTAILGMYSKRGRFRKARLIFDYMEDKNSVTWNTMIDGYMRSG 101
Query: 67 TPRNAILLFIDML------------------------------VTSPIQPQRLTYPSLFK 96
A+ LF +ML S ++P + +
Sbjct: 102 QVNTAVKLFDEMLNRDLISWTAMVNGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALA 161
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A LG G +H V+ Q + + + N++I +Y CG + AR +FD+++ VV
Sbjct: 162 ACTNLGALSFGLWIHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKR-TVV 220
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G ES L FR+MQE+
Sbjct: 221 SWNSVIVGFAANGNAHES-------------------------------LFYFRKMQEEG 249
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCPER 274
KP T L AC+ +G + +G + + + ++ + I+D+Y + G E
Sbjct: 250 FKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRD-YRISPRIEHYGCIVDLYSRAGRLED 308
Query: 275 ALQVFNTVPKK 285
AL+V ++P K
Sbjct: 309 ALKVVQSMPMK 319
>gi|115470713|ref|NP_001058955.1| Os07g0163900 [Oryza sativa Japonica Group]
gi|113610491|dbj|BAF20869.1| Os07g0163900 [Oryza sativa Japonica Group]
Length = 664
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 239/395 (60%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G+ +H VK G D F+ N +++ Y G + R +FDE+ DV+ WN ++ G
Sbjct: 165 GSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYV 224
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
+ G + +R +FD+M R+ +SW++++ GYV+ + + AL +FR M EQ ++P++ +V+
Sbjct: 225 RAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVT 284
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
L+A A+LG + G+++HN + + + V A++DMY KCGC A +VF+ + ++
Sbjct: 285 ALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRD 344
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
+ WN+M+ GLA +G +A++LF S L P ++F+ VL C+ SG V + + YF
Sbjct: 345 VFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFK 404
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI 406
L+ E Y+I+P ++HY CMVD LGRAGL+ EA +LI M PD ++WG++LS+C+ HG +
Sbjct: 405 LIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLV 464
Query: 407 EMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
++ ++IELD S YVL+S +YA + +++E E R LM K G SL+E
Sbjct: 465 DLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEA 524
Query: 467 DGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G+VH+F+ G H + ++Y L+ + + E G
Sbjct: 525 HGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAG 559
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 66/306 (21%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
AG + A VF ++ + W+T++ G+ + A+ +F +M V ++P + +
Sbjct: 226 AGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM-VEQGVRPNQAAVVT 284
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
A A+LGL G +H V + G+ + ++ MYA CG ++ AR +FD +
Sbjct: 285 ALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRR- 343
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
DV AWN+MI GLA G ++A+ELF
Sbjct: 344 DVFAWNAMICGLAAHG-------------------------------LGRDAVELFERFI 372
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ + P+ T V +LN C++ G + +G +V
Sbjct: 373 SEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIV------------------------- 407
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+ + P+ + + MV L G EAI+L G+ ++ PD + + +L++C
Sbjct: 408 ---EKYRIEPE--MEHYGCMVDLLGRAGLVPEAIELIEGM---HIAPDPVLWGTILSSCK 459
Query: 334 HSGKVN 339
G V+
Sbjct: 460 THGLVD 465
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 278/497 (55%), Gaps = 34/497 (6%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H + IK G+ D ++ ++ S G ++ A + +L WN I+ G+ +S
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDL-YSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKS 1077
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ R A+ F ++ I +T + KA L + G Q+ +K G D ++
Sbjct: 1078 NKSRKALEHF-SLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWV 1136
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ ++ MY KCG++ + LF ++ +
Sbjct: 1137 SSGVLDMYI--------------------------------KCGDMPNALELFGEISRPD 1164
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
V+W +MISGY+ N AL ++ M+ ++P E+T +L+ A + L A+ QG+ IH
Sbjct: 1165 EVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHA 1224
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+V + L+ V T+++DMYCKCG + A +VF + + + WN+M+ GLA +G+ +E
Sbjct: 1225 NVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDE 1284
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+ LF +QS+ ++PD ++FI VL+AC+HSG ++A YF M +TY I P I+HYSC+V
Sbjct: 1285 ALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLV 1344
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
DALGRAG ++EAE +I SMP A ++ +LL ACR G+ E AK+ A +++ LD ++S
Sbjct: 1345 DALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSS 1404
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL+SN+YAAS Q+++ + R +MK ++K+PG S I+V +VH FV R HP+A
Sbjct: 1405 AYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASL 1464
Query: 486 VYLLLNDLGLLIQEMGS 502
+Y + DL I+E GS
Sbjct: 1465 IYEKIEDLMKRIREEGS 1481
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 210/457 (45%), Gaps = 60/457 (13%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IHA +IK+ A + S L S AG + A F + +L WNT+I ++Q
Sbjct: 914 EQIHALVIKSSFAP-VVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA--------YAQLGLARDGAQLHGRVVK 116
++ AI F D+L ++P + T S+ +A Y LG +Q+H +K
Sbjct: 973 NNLEMEAICTFRDLL-RDGLKPDQFTLASVLRACSTGDEGEYFTLG-----SQVHVYAIK 1026
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G+ D F+ +I +Y+ K G++DE+
Sbjct: 1027 CGIINDSFVSTALIDLYS--------------------------------KGGKMDEAEF 1054
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
L + SWN+++ GY+++ K ++ALE F M E I E T+ + + A L
Sbjct: 1055 LLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLIN 1114
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
++QG+ I + + F + V + ++DMY KCG AL++F + + W +M+ G
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
NG E+ A+ ++ ++ S ++PD +F ++ A + + Q K + K+
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGK---QIHANVVKLDY 1231
Query: 357 SIKHY--SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA----K 410
S+ H+ + +VD + G +++A ++ R M + W ++L +HG+++ A +
Sbjct: 1232 SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-VVFWNAMLLGLAQHGHVDEALNLFR 1290
Query: 411 QAAKQIIELDKNESCGYVLM---SNLYAASYQFEEAM 444
I+ DK G + S L++ +Y++ +AM
Sbjct: 1291 TMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAM 1327
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 188/455 (41%), Gaps = 65/455 (14%)
Query: 1 MKDLK---KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
M DLK + HA ++ +G D + ++ S G + A VF + +L WN+
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITM-YSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 58 IIRGFSQ--SSTPRNAILLF--IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR 113
I+ ++Q S+ N + F +L RLT L K G + +HG
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
VK G E D F+ ++ +Y G + +ARL+FD++ E D V WN M+ + DE
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKM-PERDAVLWNVMLKAYVENSFQDE 801
Query: 174 SRRLFD-----------------------------------------KMV----SRNTVS 188
+ R F KM N +
Sbjct: 802 ALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFA 861
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
WN ++ ++ + A++ F+ + I T+V +L+A + GE IH ++
Sbjct: 862 WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVI 921
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
+ F V ++++MY K G A + F P+ L WN+M+ A N E EAI
Sbjct: 922 KSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAIC 981
Query: 309 LFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE--TYKIKPSIKHYS---- 362
F L LKPD + +VL AC+ +YFTL ++ Y IK I + S
Sbjct: 982 TFRDLLRDGLKPDQFTLASVLRACS----TGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLL 397
++D + G ++EAE L+ D D W +++
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHG-KYDFDLASWNAIM 1071
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ ++ G+ H +VT+ + + +I MY KCG A QVF+ + L WNS+
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 294 VFGLAM---NGYEN--EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
+ A + YEN E +LF L+ ++ +L C SG V ++ T+
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSE---TVH 740
Query: 349 TETYKIKPSIKHY--SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
KI + + +V+ + GL+ +A L MP + DA++W +L A
Sbjct: 741 GYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 278/497 (55%), Gaps = 34/497 (6%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H + IK G+ D ++ ++ S G ++ A + +L WN I+ G+ +S
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDL-YSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKS 1077
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ R A+ F ++ I +T + KA L + G Q+ +K G D ++
Sbjct: 1078 NKSRKALEHF-SLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWV 1136
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ ++ MY KCG++ + LF ++ +
Sbjct: 1137 SSGVLDMYI--------------------------------KCGDMPNALELFGEISRPD 1164
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
V+W +MISGY+ N AL ++ M+ ++P E+T +L+ A + L A+ QG+ IH
Sbjct: 1165 EVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHA 1224
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+V + L+ V T+++DMYCKCG + A +VF + + + WN+M+ GLA +G+ +E
Sbjct: 1225 NVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDE 1284
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+ LF +QS+ ++PD ++FI VL+AC+HSG ++A YF M +TY I P I+HYSC+V
Sbjct: 1285 ALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLV 1344
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
DALGRAG ++EAE +I SMP A ++ +LL ACR G+ E AK+ A +++ LD ++S
Sbjct: 1345 DALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSS 1404
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL+SN+YAAS Q+++ + R +MK ++K+PG S I+V +VH FV R HP+A
Sbjct: 1405 AYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASL 1464
Query: 486 VYLLLNDLGLLIQEMGS 502
+Y + DL I+E GS
Sbjct: 1465 IYEKIEDLMKRIREEGS 1481
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 210/457 (45%), Gaps = 60/457 (13%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IHA +IK+ A + S L S AG + A F + +L WNT+I ++Q
Sbjct: 914 EQIHALVIKSSFAP-VVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQ 972
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA--------YAQLGLARDGAQLHGRVVK 116
++ AI F D+L ++P + T S+ +A Y LG +Q+H +K
Sbjct: 973 NNLEMEAICTFRDLL-RDGLKPDQFTLASVLRACSTGDEGEYFTLG-----SQVHVYAIK 1026
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G+ D F+ +I +Y+ K G++DE+
Sbjct: 1027 CGIINDSFVSTALIDLYS--------------------------------KGGKMDEAEF 1054
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
L + SWN+++ GY+++ K ++ALE F M E I E T+ + + A L
Sbjct: 1055 LLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLIN 1114
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
++QG+ I + + F + V + ++DMY KCG AL++F + + W +M+ G
Sbjct: 1115 LKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISG 1174
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
NG E+ A+ ++ ++ S ++PD +F ++ A + + Q K + K+
Sbjct: 1175 YIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGK---QIHANVVKLDY 1231
Query: 357 SIKHY--SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA----K 410
S+ H+ + +VD + G +++A ++ R M + W ++L +HG+++ A +
Sbjct: 1232 SLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-VVFWNAMLLGLAQHGHVDEALNLFR 1290
Query: 411 QAAKQIIELDKNESCGYVLM---SNLYAASYQFEEAM 444
I+ DK G + S L++ +Y++ +AM
Sbjct: 1291 TMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAM 1327
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 188/455 (41%), Gaps = 65/455 (14%)
Query: 1 MKDLK---KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
M DLK + HA ++ +G D + ++ S G + A VF + +L WN+
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITM-YSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 58 IIRGFSQ--SSTPRNAILLF--IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR 113
I+ ++Q S+ N + F +L RLT L K G + +HG
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 114 VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDE 173
VK G E D F+ ++ +Y G + +ARL+FD++ E D V WN M+ + DE
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKM-PERDAVLWNVMLKAYVENSFQDE 801
Query: 174 SRRLFD-----------------------------------------KMV----SRNTVS 188
+ R F KM N +
Sbjct: 802 ALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFA 861
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
WN ++ ++ + A++ F+ + I T+V +L+A + GE IH ++
Sbjct: 862 WNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVI 921
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
+ F V ++++MY K G A + F P+ L WN+M+ A N E EAI
Sbjct: 922 KSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAIC 981
Query: 309 LFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE--TYKIKPSIKHYS---- 362
F L LKPD + +VL AC+ +YFTL ++ Y IK I + S
Sbjct: 982 TFRDLLRDGLKPDQFTLASVLRACS----TGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLL 397
++D + G ++EAE L+ D D W +++
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHG-KYDFDLASWNAIM 1071
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ ++ G+ H +VT+ + + +I MY KCG A QVF+ + L WNS+
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSI 683
Query: 294 VFGLAM---NGYEN--EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
+ A + YEN E +LF L+ ++ +L C SG V ++ T+
Sbjct: 684 LAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSE---TVH 740
Query: 349 TETYKIKPSIKHY--SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
KI + + +V+ + GL+ +A L MP + DA++W +L A
Sbjct: 741 GYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLKA 792
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 267/457 (58%), Gaps = 10/457 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH H++K GL DP + ++ + G++ YA LVF++ + + +I G++
Sbjct: 152 KQIHGHVLKLGLESDPFVHTSLINM-YAQNGELGYAELVFSKSSLRDAVSFTALITGYTL 210
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+A LF ++ V + ++ ++ YAQ G + + + + ++
Sbjct: 211 RGCLDDARRLFEEIPVRDAV-----SWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNES 265
Query: 125 IHNTIIYMYANCGFL---SEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
T++ A G L + R ++ ++ N++I +KCG++D++R LF+ +
Sbjct: 266 TMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGI 325
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ +SWN MI GY +KEAL LFR+MQ+ N++P++ T VS+L ACA LGA+ G+
Sbjct: 326 CEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGK 385
Query: 242 WIHNFLVTNCFEL-NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
WIH ++ L NT + T++IDMY KCG E A QVF + K L WN+M+ GLAM+
Sbjct: 386 WIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMH 445
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ N A++LF ++ +PD I+F+ VL+AC+H+G V + F+ M E Y I P ++H
Sbjct: 446 GHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQH 505
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CM+D LGRAGL +EAE L+++M PD IWGSLL ACR HGN+E+ + AAK + EL+
Sbjct: 506 YGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELE 565
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK 457
YVL+SN+YA + ++++ R + + ++K
Sbjct: 566 PENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 185/540 (34%), Positives = 309/540 (57%), Gaps = 55/540 (10%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++LK+IH+ +IKTGL A S+++ FC SP G+++YA L+F I++PN FIWNT+IR
Sbjct: 46 QNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIR 105
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G S SS+P AI ++ ML+ ++P T+P L K+ A++G ++G Q+HG V+K GLE
Sbjct: 106 GNSLSSSPVGAIDFYVRMLLCG-VEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLE 164
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+H ++I MYA G L A L+F + D V++ ++I G G +D++RRLF++
Sbjct: 165 SDPFVHTSLINMYAQNGELGYAELVFSKSSLR-DAVSFTALITGYTLRGCLDDARRLFEE 223
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ R+ VSWN+MI+GY ++ +F+EAL F+EM+ N+ P+E TMV++L+ACA+ G++ G
Sbjct: 224 IPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELG 283
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA-M 299
W+ +++ + N +V A+IDMY KCG ++A +F + +K + WN M+ G + M
Sbjct: 284 NWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM 343
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK----------------D 343
N Y+ EA+ LF +Q SN++P+ ++F+++L AC + G ++ K
Sbjct: 344 NSYK-EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTS 402
Query: 344 YFTLMTETYK--------------IKP-SIKHYSCMVDALGRAGLLEEAEKLIRSMPS-- 386
+T + + Y +KP S+ ++ M+ L G A +L R M
Sbjct: 403 LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462
Query: 387 -DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG---YVLMSNLYAASYQFEE 442
+PD I + +LSAC G +E+ +Q ++E D + S Y M +L + F+E
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVE-DYDISPKLQHYGCMIDLLGRAGLFDE 521
Query: 443 AMEERLLMKEVKIEKEP-------GCSLIEVDGEVHEFVAGG--RLHPKAPEVYLLLNDL 493
A LMK ++++ + G + + E+ EF A L P+ P Y+LL+++
Sbjct: 522 A---EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNI 578
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 265/495 (53%), Gaps = 37/495 (7%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H +K GL + A+ IL G + A L+F ++++ + WN II Q+
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDM-YGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQN 419
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ LF+ ML S ++P TY S+ KA A G ++HGR++K G+ D F+
Sbjct: 420 EEIVKTLSLFVSML-RSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFV 478
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ ++ MY CG L E + ++ ++ +
Sbjct: 479 GSALVDMYGKCGMLME--------------------------------AEKIHARLEEKT 506
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
TVSWNS+ISG+ + + A F +M E I P +T ++L+ CA + I G+ IH
Sbjct: 507 TVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHA 566
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + + + ++DMY KCG + + +F PK+ W++M+ A +G +
Sbjct: 567 QILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEK 626
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AI LF +Q N+KP++ FI+VL AC H G V++ YF M Y + P ++HYSCMV
Sbjct: 627 AINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMV 686
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGR+G + EA KLI SMP + D +IW +LLS C+ GN+E+A++A +++LD +S
Sbjct: 687 DLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSS 746
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL++N+YA + E + R +MK K++KEPGCS IEV EVH F+ G + HP++ E
Sbjct: 747 AYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEE 806
Query: 486 VYLLLNDLGLLIQEM 500
+Y LL+ EM
Sbjct: 807 IY---EQTHLLVDEM 818
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 242/493 (49%), Gaps = 26/493 (5%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
K++H +I TG A+ +L F C S +NYA+ VF ++ + ++ WNT+I G++
Sbjct: 26 KQVHTQMIVTGFVPTIYVANCLLQFYCKSSK--MNYAFKVFDRMPQRDVISWNTLIFGYA 83
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
A LF M P+R +++ SL Y G+ R ++ R+ +
Sbjct: 84 GIGNMGFAQSLFDSM-------PERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPH 136
Query: 122 DQFIHNTIIYMYA---NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D I+ + + G + + ++ E DVV ++++ +KC ++D++ R+F
Sbjct: 137 DYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVF 196
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+M RN V W+++I+GYV+N +F E L+LF++M + + S+ T S+ +CA L A +
Sbjct: 197 REMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFK 256
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G +H + + F ++I+ TA +DMY KC A +VFNT+P +N+++ G A
Sbjct: 257 LGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYA 316
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+A+ +F LQ +NL D IS LTAC+ + + L + + +I
Sbjct: 317 RQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKC-GLGFNI 375
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA----- 413
+ ++D G+ G L EA + M DA+ W ++++A + N E+ K +
Sbjct: 376 CVANTILDMYGKCGALMEACLIFEEMER-RDAVSWNAIIAAHEQ--NEEIVKTLSLFVSM 432
Query: 414 -KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
+ +E D + + G V+ + + + + R++ + ++ G +L+++ G+
Sbjct: 433 LRSTMEPD-DFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGM 491
Query: 473 FVAGGRLHPKAPE 485
+ ++H + E
Sbjct: 492 LMEAEKIHARLEE 504
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 128/246 (52%), Gaps = 1/246 (0%)
Query: 87 QRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMF 146
++LT+ + + + L G Q+H +++ G ++ N ++ Y ++ A +F
Sbjct: 5 KKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVF 64
Query: 147 DEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEAL 206
D + + DV++WN++I G A G + ++ LFD M R+ VSWNS++S Y+ N ++++
Sbjct: 65 DRM-PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSI 123
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
E+F M+ I T +L AC+ + G +H + FE + + +A++DMY
Sbjct: 124 EIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KC + A +VF +P++ L CW++++ G N E +KLF + + ++
Sbjct: 184 SKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYA 243
Query: 327 AVLTAC 332
+V +C
Sbjct: 244 SVFRSC 249
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 92/215 (42%), Gaps = 43/215 (20%)
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
+ T +L C+ L A+ G+ +H ++ F V ++ YCK A +VF+
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 281 TVPKKGLSCWNSMVFGLA-------------------------------MNGYENEAIKL 309
+P++ + WN+++FG A NG ++I++
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY-FTLMTETYKIKPSIKH----YSCM 364
F ++S + DY +F +L AC SG +DY L I+ ++ S +
Sbjct: 126 FVRMRSLKIPHDYATFAVILKAC--SG----IEDYGLGLQVHCLAIQMGFENDVVTGSAL 179
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
VD + L++A ++ R MP + + + W ++++
Sbjct: 180 VDMYSKCKKLDDAFRVFREMP-ERNLVCWSAVIAG 213
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 284/531 (53%), Gaps = 68/531 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ L +IHA +I +G I + D+ A VF P+ +WN++IR
Sbjct: 65 LNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDL--ARSVFDSTPNPSRILWNSMIR 122
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+++S A+ ++ M V K GLE
Sbjct: 123 AYTRSKQYNEALEMYYCM-----------------------------------VEKGGLE 147
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D FI ++ MY+ G L AR +FD++ DVVAWN+MI GL++ + +RR+FD+
Sbjct: 148 RDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR-DVVAWNAMIAGLSQSEDPYVARRVFDQ 206
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELF------------------------------R 210
MV ++ VSW +M++GY N F E LELF
Sbjct: 207 MVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFH 266
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M+ +N P+ T VS+L A A L A R+G H ++ F NT+V ++IDMY KCG
Sbjct: 267 QMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCG 326
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
+ + ++FN + K WN+M+ G A++G+ + AI LFS +Q S ++ D +SF++VL+
Sbjct: 327 QLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLS 386
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC H+G V + + F M++ Y IKP ++HY+CMVD LGRAGL +E I+ MP +PDA
Sbjct: 387 ACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDA 446
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
+WG+LL +CR H N+++ + A +++L+ +V++S++YA S ++ +A + R M
Sbjct: 447 GVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKM 506
Query: 451 KEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ ++K PGCS +E+ +VH F G + HP+ ++LL N L ++++G
Sbjct: 507 NDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 557
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/501 (33%), Positives = 279/501 (55%), Gaps = 34/501 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++H + +K D + A+ +A + G ++YA VF I+ L WN +I
Sbjct: 395 LPSLKELHCYSLKQEFVYDELLANAFVA-SYAKCGSLSYAQRVFHGIRSKTLNSWNALIG 453
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G++QSS PR ++ + M S + P T SL A ++L R G ++HG +++ LE
Sbjct: 454 GYAQSSDPRLSLDAHLQM-KNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 512
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F++ +++ +Y +CG L ++ LFD
Sbjct: 513 RDLFVYLSVLSLYIHCGELCTVQV--------------------------------LFDA 540
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M + VSWN++I+G+++N + AL LFR+M I+P +M+++ AC+ L ++R G
Sbjct: 541 MEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLG 600
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
H + + + E N + +IIDMY K G ++ +VFN + +K + WN+M+ G M+
Sbjct: 601 REAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMH 660
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EAIKLF +Q + PD ++F+ VLTACNHSG +++ Y M ++ +KP++KH
Sbjct: 661 GRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKH 720
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+C++D LGRAG L+ A ++ M +PD IW SLLS CR H N+EM ++ A ++ L+
Sbjct: 721 YACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLE 780
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ YVL+SNLYA ++++ + R MKE+ + K+ GCS IE++G+V FV G R
Sbjct: 781 PEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFL 840
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
E+ L + L + I +MG
Sbjct: 841 DGFEEIKSLWSILEMKIWKMG 861
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 147/335 (43%), Gaps = 56/335 (16%)
Query: 5 KKIHAHLIK--TGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+KIH HL+ T L D + +RI+ A C SP + + F ++ NLF WN +I
Sbjct: 104 RKIH-HLVSGSTRLRSDDVLCTRIITMYAMCGSP----DDSRSAFDALRSKNLFQWNAVI 158
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+S++ + +FI M+ + + P T+P + KA A + G +HG VVK GL
Sbjct: 159 SSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGL 218
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F+ N ++ Y GF+S+A +FD + E ++V+WNSMI + G+
Sbjct: 219 VEDLFVGNALVSFYGTHGFVSDALKLFD-IMPERNLVSWNSMIRVFSDNGD--------- 268
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+ P T+V++L CA+ I
Sbjct: 269 ----------------------------------DGAFMPDVATVVTVLPVCAREREIGV 294
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ +H + V + +V A++DMY K GC + +F K + WN+MV G +
Sbjct: 295 GKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSA 354
Query: 300 NGYENEAIKLFSGL--QSSNLKPDYISFIAVLTAC 332
G + L + S ++K D ++ + + C
Sbjct: 355 EGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVC 389
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 191/431 (44%), Gaps = 47/431 (10%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H ++KTGL +D + +++F G ++ A +F + + NL WN++IR FS +
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSF-YGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
P T ++ A+ G +HG VK L+ + ++
Sbjct: 268 DD-------------GAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVN 314
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N ++ MY+ G + +++++F +++ +VV+WN+M+ G + G+I + L +M++
Sbjct: 315 NALMDMYSKWGCIIDSQMIF-KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLA--- 370
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
+++K E T+++ + C + + +H +
Sbjct: 371 --------------------------GSEDVKADEVTILNAVPVCFDESVLPSLKELHCY 404
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ F + ++ A + Y KCG A +VF+ + K L+ WN+++ G A + +
Sbjct: 405 SLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLS 464
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+ +++S L PD + ++L+AC+ + K+ + + ++ + Y ++
Sbjct: 465 LDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLS 523
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
G L + L +M D + W ++++ ++G E A +Q++ L + CG
Sbjct: 524 LYIHCGELCTVQVLFDAM-EDNSLVSWNTVITGHLQNGFPERALGLFRQMV-LYGIQPCG 581
Query: 427 YVLMSNLYAAS 437
+M+ A S
Sbjct: 582 ISMMTVFGACS 592
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 23/269 (8%)
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM- 212
D V +I A CG D+SR FD + S+N WN++IS Y RN + E LE+F +M
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMI 178
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+ ++ P FT ++ ACA + + G +H +V + V A++ Y G
Sbjct: 179 SKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFV 238
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
AL++F+ +P++ L WNSM+ + NG + + PD + + VL C
Sbjct: 239 SDALKLFDIMPERNLVSWNSMIRVFSDNGDDGAFM------------PDVATVVTVLPVC 286
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKH----YSCMVDALGRAGLLEEAEKLIRSMPSDP 388
++ K + +K S+ + ++D + G + +++ +I + ++
Sbjct: 287 AREREIGVGKG-----VHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQ-MIFKLNNNK 340
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQII 417
+ + W +++ G+I +Q++
Sbjct: 341 NVVSWNTMVGGFSAEGDIHGTFDLLRQML 369
>gi|222619165|gb|EEE55297.1| hypothetical protein OsJ_03249 [Oryza sativa Japonica Group]
Length = 706
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 286/514 (55%), Gaps = 20/514 (3%)
Query: 2 KDLKKIHAHLIKTGLAKDP------IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIW 55
+ L++IHAHL+ +G P +A+ + GD++YA L+ + + L
Sbjct: 107 RHLREIHAHLLVSGRIASPSHLAAFLASLASSSSDDDDDGDLSYARLLLPR-RPATLLAH 165
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG-------- 107
N+++R ++ P A F D+ P+ P ++ L +A L A
Sbjct: 166 NSLLRALARGRRPHLAFGAFRDL----PLAPDNYSFTFLVRAATALAAAAASALDAALIA 221
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
+H ++ G D + + + MYA G + AR F E+ + DVV +M+ LA
Sbjct: 222 GSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASP-DVVCVTAMVGALAT 280
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
GE D +R LFD M R+ V+WN+MI+GYV + +EAL LF EM+ E T+VS
Sbjct: 281 GGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSA 340
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
L ACA+LGA+ +G+W+H+ + L+ + TA+IDMY KCG A++VF+++ ++ +
Sbjct: 341 LTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNV 400
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
W S V GLAMNG + + LF ++S+ ++P+ ++F+ VL C+ +G V++ + F
Sbjct: 401 YTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDS 460
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
M + I P ++HY CMVD GRAG L++A I MP +P +WG+LL+A R H N+E
Sbjct: 461 MKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVE 520
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
+ K A +++ ++ +VL+SN+YA S ++ R +MK ++K PGCS IEV
Sbjct: 521 LGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVG 580
Query: 468 GEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G+VHEF GG+ HP+ E+ ++L ++ ++ G
Sbjct: 581 GKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQG 614
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/464 (36%), Positives = 277/464 (59%), Gaps = 16/464 (3%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
++ A F ++ + N+ W ++I G+ ++ A +LF M P++ ++ +
Sbjct: 183 VDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSM----PVK-DLASWNVMVS 237
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
Y +G + + G++ D N +I + G L A+ FD + + +V+
Sbjct: 238 GYMDIGDCVNARIIFGKMPIH----DTGSWNIMISGFCKAGELESAKDFFDRMPNK-NVI 292
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+W M+ G K G+ + +R LFD+M +N V+W++MI GY RN + +ALELF +EQ+
Sbjct: 293 SWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQD 352
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGE-WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
IKP E ++ +++AC++LG I E IHN++ + + V T++IDMY KCG E+A
Sbjct: 353 IKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLS-DLRVFTSLIDMYAKCGSIEKA 411
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
LQ+F K L C+++M+ LA +G +AI LF +Q +N+KPD ++F+ VLTACNH
Sbjct: 412 LQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHG 471
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
G V++ + YF MTE + I+PS KHY+C+VD LGR G LEEA LIR+MP P +++WG+
Sbjct: 472 GLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGA 531
Query: 396 LLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
LL+ACR H N+++A+ AA ++ +++ + S Y+L+SN+YAA+ ++ + R ++E ++
Sbjct: 532 LLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRV 591
Query: 456 EKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV----YLLLNDLGL 495
K G S IE+ VHEFV G H + + YLL D+ L
Sbjct: 592 RKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILYLLCEDMKL 635
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 222/476 (46%), Gaps = 62/476 (13%)
Query: 1 MKDLKKIHAHL-IKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K LK IHA L I++ +A +++L S G +YA+ VF +I +PN ++W ++I
Sbjct: 15 LKSLKSIHARLLIESSVASSEFVINKLLRL-YSRFGATDYAHKVFDEITQPNAYLWTSLI 73
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G+ ++ A LFI M PI T S+ KA A+L + G ++G V+K G
Sbjct: 74 HGYVENRQYDEAFSLFIQMR-REPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGF 132
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
FD + N+++ ++ C + AR FDE+ E D+V+WN MI G +D +R+ FD
Sbjct: 133 AFDLIVQNSVLDLFMRCRKVDTARQAFDEM-CEKDIVSWNMMISGYGNNDRVDIARKFFD 191
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS-------LLNACA 232
+M RN VSW SMI GYV+ EA LF M +++ S MVS +NA
Sbjct: 192 RMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDL-ASWNVMVSGYMDIGDCVNARI 250
Query: 233 KLGAI---RQGEW---IHNFLVTNCFEL-----------NTIVVTAIIDMYCKCGCPERA 275
G + G W I F E N I ++D Y K G A
Sbjct: 251 IFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGA 310
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+F+ +P K L W++M+ G A NG +A++LF + ++KPD + +++AC+
Sbjct: 311 RCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQL 370
Query: 336 GKVNQAKD---------------YFTLMTETYKIKPSIKH---------------YSCMV 365
G ++ A+ FT + + Y SI+ YS M+
Sbjct: 371 GIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMI 430
Query: 366 DALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
AL GL +A L M PD++ + +L+AC G ++ ++ KQ+ E
Sbjct: 431 AALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTE 486
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 146/315 (46%), Gaps = 41/315 (13%)
Query: 129 IIYMYANCGFLS-----EARLMFDE--VDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
I+++ NC L ARL+ + +EF + N ++ ++ G D + ++FD++
Sbjct: 5 ILHIIHNCKTLKSLKSIHARLLIESSVASSEFVI---NKLLRLYSRFGATDYAHKVFDEI 61
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
N W S+I GYV N ++ EA LF +M+ + I FT+ S+L A A+L + G+
Sbjct: 62 TQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQ 121
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
++ F++ F + IV +++D++ +C + A Q F+ + +K + WN M+ G N
Sbjct: 122 AVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNND 181
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT----ETYKIKPS 357
+ A K F + N+ +S+ +++ +G + +A+ F M ++ + S
Sbjct: 182 RVDIARKFFDRMPERNV----VSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVS 237
Query: 358 ----------------------IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
++ M+ +AG LE A+ MP + + I WG
Sbjct: 238 GYMDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMP-NKNVISWGI 296
Query: 396 LLSACRKHGNIEMAK 410
+L K+G+ A+
Sbjct: 297 MLDGYIKNGDTNGAR 311
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 268/497 (53%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IH +I++GL D + ++ G + AY VF ++ N+ W +I GF+
Sbjct: 607 RQIHMLIIESGLQLDVNLGNALINMYIR-CGSLQDAYEVFHSLRHRNVMSWTAMIGGFAD 665
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
R A LF M +P + T+ S+ KA +G ++ ++ G E D
Sbjct: 666 QGEDRKAFELFWQMQ-NDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTG 724
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N +I Y+ K G + ++R++FDKM +R
Sbjct: 725 VGNALISAYS--------------------------------KSGSMTDARKVFDKMPNR 752
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SWN MI+GY +N AL+ +MQEQ + ++F+ VS+LNAC+ A+ +G+ +H
Sbjct: 753 DIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVH 812
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+V + + V A+I MY KCG E A +VF+ +K + WN+M+ A +G +
Sbjct: 813 AEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLAS 872
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A+ F+ + +KPD +F ++L+ACNHSG V + F+ + + + P+I+HY C+
Sbjct: 873 KALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCL 932
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
V LGRAG +EAE LI MP PDA +W +LL ACR HGN+ +A+ AA ++L+
Sbjct: 933 VGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNP 992
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+SN+YAA+ ++++ + R +M+ I KEPG S IEVD +HEF+A R HP+
Sbjct: 993 AVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETA 1052
Query: 485 EVYLLLNDLGLLIQEMG 501
E+Y L L L ++ G
Sbjct: 1053 EIYEELKRLSLEMERAG 1069
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 206/413 (49%), Gaps = 38/413 (9%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH+H+ + G + D + +++ + GD+ A +F + K +L WN II G+++
Sbjct: 407 IHSHISEVGHSSDVQIGNSLISM-YARCGDLPRARELFNTMPKRDLISWNAIIAGYARRE 465
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A+ L+ M + ++P R+T+ L A DG +H +++ G++ + +
Sbjct: 466 DRGEAMKLYKQMQ-SEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLA 524
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N ++ MY +CG I E++ +F+ +R+
Sbjct: 525 NALMNMYR--------------------------------RCGSIMEAQNVFEGTRARDI 552
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
+SWNSMI+G+ ++ ++ A +LF EM+++ ++P + T S+L C A+ G IH
Sbjct: 553 ISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHML 612
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
++ + +L+ + A+I+MY +CG + A +VF+++ + + W +M+ G A G + +A
Sbjct: 613 IIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKA 672
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT-LMTETYKIKPSIKHYSCMV 365
+LF +Q+ KP +F ++L AC S +++ K ++ Y++ + + ++
Sbjct: 673 FELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVG--NALI 730
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
A ++G + +A K+ MP + D + W +++ ++G A Q A Q+ E
Sbjct: 731 SAYSKSGSMTDARKVFDKMP-NRDIMSWNKMIAGYAQNGLGGTALQFAYQMQE 782
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 208/469 (44%), Gaps = 73/469 (15%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
KKIH+ +I+ G +DP + +L D+ A VF+ I + ++ +NT++ ++Q
Sbjct: 203 KKIHSKIIEAGYQRDPRVQNSLLNM-YGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQ 261
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL----- 119
+ I LF M + I P ++TY +L A+ + +G ++H V +GL
Sbjct: 262 KAYVEECIGLFGQM-SSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIR 320
Query: 120 --------------------------EFDQFIHNTIIYMYANCGFLSEA----------- 142
+ D ++N +I A G EA
Sbjct: 321 VGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDG 380
Query: 143 ----RLMF-----------------------DEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
R + EV DV NS+I A+CG++ +R
Sbjct: 381 VVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRAR 440
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
LF+ M R+ +SWN++I+GY R EA++L+++MQ + +KP T + LL+AC
Sbjct: 441 ELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSS 500
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A G+ IH ++ + + N + A+++MY +CG A VF + + WNSM+
Sbjct: 501 AYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIA 560
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
G A +G A KLF ++ L+PD I+F +VL C + + + L+ E+ ++
Sbjct: 561 GHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES-GLQ 619
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ + +++ R G L++A ++ S+ + + W +++ G
Sbjct: 620 LDVNLGNALINMYIRCGSLQDAYEVFHSL-RHRNVMSWTAMIGGFADQG 667
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 192/416 (46%), Gaps = 36/416 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ + K+IHA +++ G+ D I S +L ++ A+ VF ++ + ++ WN++I
Sbjct: 98 LAEAKRIHAQMVEAGVGPD-IFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLIS 156
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++Q + A LF +M T+ P ++TY S+ A G ++H ++++ G +
Sbjct: 157 CYAQQGFKKKAFQLFEEMQ-TAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQ 215
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + N+++ MY C L AR +F + DVV++N+M +GL
Sbjct: 216 RDPRVQNSLLNMYGKCEDLPSARQVFSGI-YRRDVVSYNTM-LGL--------------- 258
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
Y + +E + LF +M + I P + T ++LL+A + +G
Sbjct: 259 ---------------YAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEG 303
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ IH V + V TA+ M+ +CG A Q + + +N+++ LA +
Sbjct: 304 KRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQH 363
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ EA + + ++S + + ++++VL AC+ S + + + ++E ++
Sbjct: 364 GHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGH-SSDVQI 422
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ ++ R G L A +L +MP D I W ++++ + + A + KQ+
Sbjct: 423 GNSLISMYARCGDLPRARELFNTMPKR-DLISWNAIIAGYARREDRGEAMKLYKQM 477
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 153/327 (46%), Gaps = 34/327 (10%)
Query: 83 PIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEA 142
P + R Y L + + + ++H ++V+ G+ D F+ N +I MY
Sbjct: 77 PTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYV-------- 128
Query: 143 RLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKF 202
KC + ++ ++F KM R+ +SWNS+IS Y +
Sbjct: 129 ------------------------KCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFK 164
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAI 262
K+A +LF EMQ PS+ T +S+L AC + G+ IH+ ++ ++ + V ++
Sbjct: 165 KKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSL 224
Query: 263 IDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
++MY KC A QVF+ + ++ + +N+M+ A Y E I LF + S + PD
Sbjct: 225 LNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDK 284
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
+++I +L A +++ K L + I+ + + R G + A++ +
Sbjct: 285 VTYINLLDAFTTPSMLDEGKRIHKLAVNE-GLNSDIRVGTALATMFVRCGDVAGAKQALE 343
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ +D D +++ +L++A +HG+ E A
Sbjct: 344 AF-ADRDVVVYNALIAALAQHGHYEEA 369
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 1/158 (0%)
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
E +L Q + + + V L+ C + ++ + + IH +V + + +I
Sbjct: 65 EREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLI 124
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
+MY KC A QVF +P++ + WNS++ A G++ +A +LF +Q++ P I
Sbjct: 125 NMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKI 184
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTET-YKIKPSIKH 360
++I++LTAC ++ K + + E Y+ P +++
Sbjct: 185 TYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN 222
>gi|125557337|gb|EAZ02873.1| hypothetical protein OsI_25005 [Oryza sativa Indica Group]
Length = 651
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 239/395 (60%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G+ +H VK G D F+ N +++ Y G + R +FDE+ DV+ WN ++ G
Sbjct: 165 GSHVHALAVKAGAAGDLFVRNALVHFYGVSGDVGAMRRVFDELPRVRDVLTWNEVLAGYV 224
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
+ G + +R +FD+M R+ +SW++++ GYV+ + + AL +FR M EQ ++P++ +V+
Sbjct: 225 RAGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNMVEQGVRPNQAAVVT 284
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
L+A A+LG + G+++HN + + + V A++DMY KCGC A +VF+ + ++
Sbjct: 285 ALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRRD 344
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
+ WN+M+ GLA +G +A++LF S L P ++F+ VL C+ SG V + + YF
Sbjct: 345 VFAWNAMICGLAAHGLGRDAVELFERFISEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFK 404
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI 406
L+ E Y+I+P ++HY CMVD LGRAGL+ EA +LI M PD ++WG++LS+C+ HG +
Sbjct: 405 LIVEKYRIEPEMEHYGCMVDLLGRAGLVPEAIELIEGMHIAPDPVLWGTILSSCKTHGLV 464
Query: 407 EMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
++ ++IELD S YVL+S +YA + +++E E R LM K G SL+E
Sbjct: 465 DLGVSVGNKLIELDPTHSGYYVLLSGIYAKANKWDEVREVRKLMSSRGTNKSAGWSLMEA 524
Query: 467 DGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G+VH+F+ G H + ++Y L+ + + E G
Sbjct: 525 HGKVHKFLVGDTYHKDSVQIYDTLDMINKRLTEAG 559
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 66/306 (21%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
AG + A VF ++ + W+T++ G+ + A+ +F +M V ++P + +
Sbjct: 226 AGMMTVAREVFDEMPVRDEISWSTLVGGYVKEEELEVALGVFRNM-VEQGVRPNQAAVVT 284
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
A A+LGL G +H V + G+ + ++ MYA CG ++ AR +FD +
Sbjct: 285 ALSAAARLGLLEHGKFVHNVVQRSGMPVCMNVGAALVDMYAKCGCVAVAREVFDGMRRR- 343
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
DV AWN+MI GLA G ++A+ELF
Sbjct: 344 DVFAWNAMICGLAAHG-------------------------------LGRDAVELFERFI 372
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ + P+ T V +LN C++ G + +G +V
Sbjct: 373 SEGLSPTNVTFVGVLNGCSRSGLVAEGRRYFKLIV------------------------- 407
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+ + P+ + + MV L G EAI+L G+ ++ PD + + +L++C
Sbjct: 408 ---EKYRIEPE--MEHYGCMVDLLGRAGLVPEAIELIEGM---HIAPDPVLWGTILSSCK 459
Query: 334 HSGKVN 339
G V+
Sbjct: 460 THGLVD 465
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 190/567 (33%), Positives = 296/567 (52%), Gaps = 71/567 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ LK +HA ++K+ L P + ++A S G I++AY +F+ N+F+WN IIR
Sbjct: 17 LEALKSLHASILKSHL--HPHLCTSLIAQYAS-LGSISHAYALFSTSHSSNVFLWNHIIR 73
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
FS + RN++ L+ ML IQ T+P L KA L GA+ H VV G E
Sbjct: 74 AFSNTPHSRNSLRLYSRMLQLG-IQATNFTFPFLLKACGCLADFELGARAHAHVVVFGYE 132
Query: 121 FDQFIHNTIIYM-------------------------------YANCGFLSEARLMF--- 146
D F+ N+++ M YA+ G E L+F
Sbjct: 133 SDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEEGLLLFWRM 192
Query: 147 ----------------------DEVDTEFDVVAWNSM---------IIGL-AKCGEIDES 174
E D VV N + +G+ A+CG ID +
Sbjct: 193 LNEGIAPNRGSIVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDVA 252
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
RR F ++ ++ V+W SMI YV+ ALELF++M+ I P T++SL++A + L
Sbjct: 253 RRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHAVSNL 312
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
+ + ++H + + F+ + + TA+ID+Y KCG E A + F+ + + L W++M+
Sbjct: 313 ASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISWSTMI 372
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G M+G+ EA+ LF +++S +KPD+I+F+ VL+AC+H G + + + F M + +
Sbjct: 373 SGYGMHGHGREALCLFDQMKAS-IKPDHIAFVMVLSACSHGGLIAEGWECFKAMNRDFGV 431
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P +HY+CMVD LGRAG L EA+ I MP PDA +WG+LL ACR H N+E A+ AA+
Sbjct: 432 TPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGACRIHSNLETAETAAR 491
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+ LD Y+L+SN+YA+S + +EA + R LMK + K G ++IE+ +V+ FV
Sbjct: 492 HLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVRKTVGHTIIEIKNKVYTFV 551
Query: 475 AGGRLHPKAPEVYLLLNDLGLLIQEMG 501
AG +P+ +Y L L IQE G
Sbjct: 552 AGDTSNPQTDLIYSELRKLMDRIQEAG 578
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 176/498 (35%), Positives = 296/498 (59%), Gaps = 11/498 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFT-QIKKP-NLFIWNTI 58
+ L++ H ++K L ++ I SR + T+ +Y+Y +FT +P +F++N I
Sbjct: 26 LTHLQQTHTFILKHALFQNDINLSRFI-HKTASLNYPSYSYSIFTFNHNRPFPIFVYNNI 84
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
I SS + A+ +F + + + P + K+ L G Q+H V G
Sbjct: 85 IYAL-YSSNAKLAVSIFRSVRRLG-LSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTG 142
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L+ + + +++I MY+ C + AR +FDE V+ N+MI+ K G++ +R+LF
Sbjct: 143 LDKNVSVCSSLIQMYS-CYDVCSARKLFDEFGGNGCVL--NAMIVAYVKVGDVSNARKLF 199
Query: 179 DKMVSRN--TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
D M+ R+ SW +MISGY + EA++LFR MQ +N+KP E ++++L+ACA LGA
Sbjct: 200 DSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGA 259
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ GEWIHN++ + + ++IDMY K G +AL++F + K + W +M+ G
Sbjct: 260 LHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAG 319
Query: 297 LAMNGYENEAIKLFSGLQSSN-LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
LA++G EA+++FS ++ + +KP+ ++FIA+L+AC+H G V +DYFT M Y I+
Sbjct: 320 LALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIE 379
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P I+HY CM+D LGRAG L+EA++++ MP + +A IWGSLL+A + G+ E+A++A +
Sbjct: 380 PKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRH 439
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+ L+ Y L+SN YA+ ++ E+ R +M++ +EK PG S IEV+ V+EF+A
Sbjct: 440 LTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIVYEFIA 499
Query: 476 GGRLHPKAPEVYLLLNDL 493
G +L ++Y +L+ L
Sbjct: 500 GDKLSIYFVDIYDVLHSL 517
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 265/495 (53%), Gaps = 37/495 (7%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H +K GL + A+ IL G + A +F +++ + WN II Q+
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDM-YGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQN 419
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ LF+ ML S ++P TY S+ KA A G ++HGR+VK G+ D F+
Sbjct: 420 EEIVKTLSLFVSML-RSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFV 478
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ ++ MY CG L E + ++ D++ +
Sbjct: 479 GSALVDMYGKCGMLME--------------------------------AEKIHDRLEEKT 506
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
TVSWNS+ISG+ + + A F +M E + P FT ++L+ CA + I G+ IH
Sbjct: 507 TVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHA 566
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
++ + + + ++DMY KCG + + +F PK+ W++M+ A +G+ +
Sbjct: 567 QILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQ 626
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AIKLF +Q N+KP++ FI+VL AC H G V++ YF +M Y + P ++HYSCMV
Sbjct: 627 AIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMV 686
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGR+ + EA KLI SM + D +IW +LLS C+ GN+E+A++A +++LD +S
Sbjct: 687 DLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSS 746
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL++N+YA + E + R +MK K++KEPGCS IEV EVH F+ G + HP++ E
Sbjct: 747 AYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEE 806
Query: 486 VYLLLNDLGLLIQEM 500
+Y LL+ EM
Sbjct: 807 IY---EQTHLLVDEM 818
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 205/408 (50%), Gaps = 17/408 (4%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
K+ HA +I T A+ ++ F C S ++NYA+ VF ++ ++ WNT+I G++
Sbjct: 26 KQAHAQMIVTSFVPTIYVANCLVQFYCKSS--NMNYAFKVFDRMPHRDVISWNTMIFGYA 83
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ A LF M P+R +++ SL Y G+ R ++ R+ +
Sbjct: 84 EIGNMGFAQSLFDTM-------PERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPH 136
Query: 122 DQFIHNTIIYMYA---NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D + ++ + + G + + ++ E DVV ++++ +KC ++D + R+F
Sbjct: 137 DYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIF 196
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+M RN V W+++I+GYV+N +F E L+LF++M + + S+ T S+ +CA L A +
Sbjct: 197 REMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFK 256
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G +H + + F ++I+ TA +DMY KC A +VFNT+P +N+++ G A
Sbjct: 257 LGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYA 316
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+A+++F LQ + L D IS LTAC+ + L + + +I
Sbjct: 317 RQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKC-GLGFNI 375
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI 406
+ ++D G+ G L EA + M DA+ W ++++A ++ I
Sbjct: 376 CVANTILDMYGKCGALVEACTIFDDMER-RDAVSWNAIIAAHEQNEEI 422
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 153/318 (48%), Gaps = 18/318 (5%)
Query: 87 QRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMF 146
++ T+ + + + L G Q H +++ ++ N ++ Y ++ A +F
Sbjct: 5 KKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVF 64
Query: 147 DEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEAL 206
D + DV++WN+MI G A+ G + ++ LFD M R+ VSWNS++S Y+ N ++++
Sbjct: 65 DRMPHR-DVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSI 123
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
E+F M+ I T +L AC+ + G +H + FE + + +A++DMY
Sbjct: 124 EIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KC + A ++F +P++ L CW++++ G N E +KLF + + ++
Sbjct: 184 SKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYA 243
Query: 327 AVLTACNHSGKVNQAKDYFTLMTE--TYKIKPSIKHYSCM----VDALGRAGLLEEAEKL 380
+V +C F L T+ + +K + S + +D + + +A K+
Sbjct: 244 SVFRSC-------AGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKV 296
Query: 381 IRSMPSDP----DAIIWG 394
++P+ P +AII G
Sbjct: 297 FNTLPNPPRQSYNAIIVG 314
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 43/215 (20%)
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
+FT +L C+ L A+ G+ H ++ F V ++ YCK A +VF+
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 281 TVPKKGLSCWNSMVFGLA-------------------------------MNGYENEAIKL 309
+P + + WN+M+FG A NG ++I++
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY-FTLMTETYKIKPSIKH----YSCM 364
F ++S + DY +F VL AC SG +DY L I+ ++ S +
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKAC--SG----IEDYGLGLQVHCLAIQMGFENDVVTGSAL 179
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
VD + L+ A ++ R MP + + + W ++++
Sbjct: 180 VDMYSKCKKLDGAFRIFREMP-ERNLVCWSAVIAG 213
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 286/505 (56%), Gaps = 38/505 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K L +IH+ + +GL D ++++ F + SP+ D++YA + P WN +I
Sbjct: 677 IKHLYQIHSQIQVSGLQGDTFLVTQLIKFSSLSPSKDLSYAQSILDHSVHPVPLPWNILI 736
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG++ S+TP++A+ ++ +M I+P LT+P L KA A ++G Q+H V+K GL
Sbjct: 737 RGYADSNTPKDALFVYRNMR-NEGIRPNSLTFPFLLKACAACFATKEGKQVHVEVIKYGL 795
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D +++N ++ Y +C + +A C ++FD
Sbjct: 796 DCDVYVNNNLVNFYGSCKKILDA-------------------------C-------KVFD 823
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M R VSWN++I+ V ++K EA+ F +M++ +P TMV +L CA++G +
Sbjct: 824 EMPERTVVSWNAVITSCVESLKLGEAIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGL 883
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G WIH+ ++ LN + TA++DMY K G A VF+ + +K + W++M+ GLA
Sbjct: 884 GRWIHSQVIERGLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMKEKNVWTWSAMILGLAQ 943
Query: 300 NGYENEAIKLF-SGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G+ E ++LF ++SS + P+Y++F+ VL AC+H+G V+ YF M TY IKP +
Sbjct: 944 HGFAKEGLELFLDMMRSSLIHPNYVTFLGVLCACSHAGLVSDGFRYFHEMGHTYGIKPMM 1003
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH---GNIEMAKQAAKQ 415
HY MVD LGRAGLL+EA I MP PD I+W +LLSAC H + +A + K+
Sbjct: 1004 VHYGAMVDILGRAGLLKEAYNFITKMPFQPDPIVWRTLLSACSIHDVKDSTGVAYKVRKR 1063
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
++EL+ S +V+++N+YA + +E+A + R +M++ ++K+ G S +E+ G +H F +
Sbjct: 1064 LLELEPRRSGNFVMVANMYADAGMWEKAAKVRRVMRDGGLKKKAGESCVELSGSIHRFFS 1123
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQEM 500
G +Y LL+ L L +Q M
Sbjct: 1124 GYDSQDDKEGMYQLLDGLNLHMQMM 1148
>gi|357131180|ref|XP_003567218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Brachypodium distachyon]
Length = 474
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/428 (36%), Positives = 256/428 (59%), Gaps = 12/428 (2%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A+ VF + P W+ +++ +S P+ A+ LF D TY +F A
Sbjct: 52 AHQVFDRRPTP----WHALLKAYSHGPFPQEALNLFRDAHRNMADD----TYAFMFSLRA 103
Query: 100 QLGLAR--DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVA 157
GLA GAQLHG V+++G EF ++H ++I Y CG L +AR+ FDE+ + +VV+
Sbjct: 104 CAGLAWPWTGAQLHGLVIRKGFEFHAYVHTSLINTYVVCGCLVDARMAFDEMPVK-NVVS 162
Query: 158 WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI 217
WN MI G A GEI+ +R LF++M SRN VSW +I GY R+ EA+ L R M + I
Sbjct: 163 WNVMITGFAGRGEIEYARLLFERMPSRNVVSWTGLIDGYTRSCHSVEAVALLRRMMAEGI 222
Query: 218 KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQ 277
P+E T+++++ A + +G I GE +H + N L+ V ++ID+Y K G + +L+
Sbjct: 223 SPTEITVLAVVPAISDIGRILMGETLHGYCEKNGLVLDIRVGNSLIDLYAKIGSIQSSLK 282
Query: 278 VFN-TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
VF+ + ++ L W S++ G AM+G EA++LF+ ++ S ++P+ ++F++VL AC+H G
Sbjct: 283 VFHGMLNRRNLVSWTSIISGFAMHGLSTEAVELFAEMRRSGIRPNRVTFLSVLNACSHGG 342
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
V Q ++F M Y I P IKH+ C++D LGRAG L EAE++I +P + ++I+W +L
Sbjct: 343 LVEQGVEFFKSMVYEYNINPEIKHFGCIIDMLGRAGRLCEAEQVIGGLPMEVNSIVWRTL 402
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
L+ C K+G +EM K+A K+I+ ++ +V++SN+ +F +A R L+ E
Sbjct: 403 LACCSKYGEVEMGKRAMKKILHTERESGGDFVVVSNMLTELGRFSDAERSRKLLDERNAV 462
Query: 457 KEPGCSLI 464
K PG +L+
Sbjct: 463 KVPGLALV 470
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 39/253 (15%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G+I YA L+F ++ N+ W +I G+++S A+ L M+ I P +T ++
Sbjct: 174 GEIEYARLLFERMPSRNVVSWTGLIDGYTRSCHSVEAVALLRRMMAEG-ISPTEITVLAV 232
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A + +G G LHG K GL D + N++I +YA G + + +F + +
Sbjct: 233 VPAISDIGRILMGETLHGYCEKNGLVLDIRVGNSLIDLYAKIGSIQSSLKVFHGMLNRRN 292
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+V+W S+I G A G EA+ELF EM+
Sbjct: 293 LVSWTSIISGFAMHG-------------------------------LSTEAVELFAEMRR 321
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV----VTAIIDMYCKCG 270
I+P+ T +S+LNAC+ G + QG F + +E N IIDM + G
Sbjct: 322 SGIRPNRVTFLSVLNACSHGGLVEQGV---EFFKSMVYEYNINPEIKHFGCIIDMLGRAG 378
Query: 271 CPERALQVFNTVP 283
A QV +P
Sbjct: 379 RLCEAEQVIGGLP 391
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 120/281 (42%), Gaps = 36/281 (12%)
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
S+ + ++ R W++++ Y +EAL LFR+ +N+ + + L ACA
Sbjct: 47 HSQLVAHQVFDRRPTPWHALLKAYSHGPFPQEALNLFRDAH-RNMADDTYAFMFSLRACA 105
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
L G +H ++ FE + V T++I+ Y CGC A F+ +P K + WN
Sbjct: 106 GLAWPWTGAQLHGLVIRKGFEFHAYVHTSLINTYVVCGCLVDARMAFDEMPVKNVVSWNV 165
Query: 293 MVFGLA--------------------------MNGYEN-----EAIKLFSGLQSSNLKPD 321
M+ G A ++GY EA+ L + + + P
Sbjct: 166 MITGFAGRGEIEYARLLFERMPSRNVVSWTGLIDGYTRSCHSVEAVALLRRMMAEGISPT 225
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
I+ +AV+ A + G++ + E + I+ + ++D + G ++ + K+
Sbjct: 226 EITVLAVVPAISDIGRILMGETLHGY-CEKNGLVLDIRVGNSLIDLYAKIGSIQSSLKVF 284
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
M + + + W S++S HG ++ +A + E+ ++
Sbjct: 285 HGMLNRRNLVSWTSIISGFAMHG---LSTEAVELFAEMRRS 322
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 275/490 (56%), Gaps = 35/490 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +H ++K L D + +L + GD+ A +F ++ N +W ++I G+ +
Sbjct: 99 KVLHGQVVKYMLHSDLYIETTLLNM-YAACGDLKSARFLFERMGHRNKVVWTSMISGYMK 157
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P A+LL+ M P +T +L A A+L G +LH + + ++
Sbjct: 158 NHCPNEALLLYKKM-EEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV 216
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ + ++ MYA KCG++ +R++FDK+ +
Sbjct: 217 LGSALVNMYA--------------------------------KCGDLKTARQVFDKLSDK 244
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+ +W+++I GYV+N + EAL+LFRE+ N++P+E T++++++ACA+LG + G W+
Sbjct: 245 DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWV 304
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H+++ + + ++IDM+ KCG + A ++F+++ K L WNSMV G A++G
Sbjct: 305 HDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLG 364
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ F +Q+++L+PD I+FI VLTAC+H+G V + K F + Y ++ +HY C
Sbjct: 365 REALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGC 424
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD L RAGLL EA + IR MP PD IWGS+L ACR + N+E+ ++AA+ +++L+
Sbjct: 425 MVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTN 484
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
Y+L+SN+YA + E + R LM E I+K PGCS + +D H F+AG HP+
Sbjct: 485 DGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEI 544
Query: 484 PEVYLLLNDL 493
E+ ++L +
Sbjct: 545 AEISIMLRQV 554
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 204/396 (51%), Gaps = 36/396 (9%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAG-DINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPR 69
++ TG + ++++A S + YAY VF ++ ++ WN+++R F S+ PR
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPR 60
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
A+ + +ML S P R T+PSL K A L + G LHG+VVK L D +I T+
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 189
+ MYA CG L AR +F+ + VV W S
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVV-WTS----------------------------- 150
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
MISGY++N EAL L+++M+E P E TM +L++ACA+L + G +H+ +
Sbjct: 151 --MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIRE 208
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
++ ++ +A+++MY KCG + A QVF+ + K + W++++FG N EA++L
Sbjct: 209 MDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQL 268
Query: 310 FSGLQ-SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL 368
F + SN++P+ ++ +AV++AC G + + +T T K S+ + ++D
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLNNSLIDMF 327
Query: 369 GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ G ++ A+++ SM S D I W S+++ HG
Sbjct: 328 SKCGDIDAAKRIFDSM-SYKDLISWNSMVNGFALHG 362
>gi|218202680|gb|EEC85107.1| hypothetical protein OsI_32492 [Oryza sativa Indica Group]
Length = 1073
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/503 (33%), Positives = 271/503 (53%), Gaps = 50/503 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +HAHL+++G A A + A + Y + P F +N+ IR ++
Sbjct: 9 KALHAHLLRSGAL---FADPSAAAPLAAAASLASLPYALSILRAHPTTFSYNSAIRALAR 65
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD---------GAQLHGRVV 115
P AI L+ ML S P TYP L A A+L + G LH +
Sbjct: 66 GPRPHLAISLYRSMLSHSRSHPNNYTYPPLLAACARLADSDSSSAAAAAAAGVALHASLF 125
Query: 116 KQGLEF-DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
++GLE D+FI +++ +YA G L+ AR +FD
Sbjct: 126 RRGLESPDRFIRASLLSLYAAAGDLTAARQVFD--------------------------- 158
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R+ WNS++ Y+ + + L LFR M+ + T+++LL+ACA L
Sbjct: 159 ---LSPPNHRDLPLWNSLLHAYLSRAHYVQVLRLFRTMRTAD----HVTLLALLSACAHL 211
Query: 235 GAIRQGEWIHNFLVTNC-FELNTIVVTAIIDMYCKCGCPERALQVFNTVP--KKGLSCWN 291
GA+ W H +L T C F + T + TA+++MY +CG + A +F++ P K + W
Sbjct: 212 GALHTARWAHAYLATTCSFPITTNLATALLNMYMRCGDVQTACSLFHSTPTRHKDVHTWT 271
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
M+ GLA+NG+ +A+ LF+ ++ N++PD ++ AVL+AC H+G V++ K M
Sbjct: 272 VMIAGLALNGFSTDALHLFTHMKDHNIQPDSVTLTAVLSACTHAGMVDEGKRILRRMPLD 331
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
Y ++P+I+HY C VD LGRAGLLEEA LIR++P D +WG+LL ACR H N EM +
Sbjct: 332 YHLQPTIEHYGCTVDLLGRAGLLEEALALIRAVPFKADVALWGALLVACRCHRNFEMGQM 391
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
A +I+ LD + +V +SN+YAA+ +++ E R MK+ +I K PG S++E+DG V+
Sbjct: 392 VAMEILRLDPQHAGAWVFLSNVYAAAGKWDLVQEVRSSMKQHRIHKPPGSSVVELDGVVY 451
Query: 472 EFVAGGRLHPKAPEVYLLLNDLG 494
EF++G HP++ ++Y +L+++G
Sbjct: 452 EFLSGDHSHPQSDQIYAMLDEIG 474
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 269/489 (55%), Gaps = 39/489 (7%)
Query: 6 KIHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ HA K G L + P+ + + + G A VF ++ + ++ W ++ F++
Sbjct: 139 QAHAVAEKAGFLGRVPVQNALVTFY--GACGQCGDARKVFDEMAERDVVSWTALLSAFTR 196
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ + +M VT P +T S+ A LG AR G +HG ++ E +
Sbjct: 197 GGMFMEALGVLAEMDVT----PNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLI 252
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MY KC ++D +RR+FD +++R
Sbjct: 253 VGNALLDMYV--------------------------------KCEKLDLARRVFDMLLAR 280
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSW MISG V+ + EALE+F MQ +KP + + ++L+ACA LGA+ G W+H
Sbjct: 281 DIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVH 340
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ E + V T+++DMY KCGC + A+ +F +P K +S WN+++ G A++G
Sbjct: 341 EYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGR 400
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+ F + +S L P+ ++FI VL AC HSG V + + F LMT++YK+ P HY CM
Sbjct: 401 EALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCM 460
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAGL++EA +I++MP P W +LLSAC+ HG ++ ++Q I EL+ + +
Sbjct: 461 VDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHELESSGN 520
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+SN+YA S ++ + + R M E ++KEPG S+IEV+G+ EF+ G + H
Sbjct: 521 GIYVLLSNMYAVSDRWADVGKARGFMNEKGMQKEPGSSVIEVNGKTCEFLVGQQNHLYMD 580
Query: 485 EVYLLLNDL 493
+V +L+ L
Sbjct: 581 DVRAMLSIL 589
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 165/356 (46%), Gaps = 42/356 (11%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPI----QPQRLTYPSLFKAYAQLGLA-RDGAQ 109
+N +I + + P A F +LV S +P T P+ KA A+LG R+G Q
Sbjct: 80 FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQ 139
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
H K G + N ++ Y CG +CG
Sbjct: 140 AHAVAEKAGFLGRVPVQNALVTFYGACG-----------------------------QCG 170
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
+ +R++FD+M R+ VSW +++S + R F EAL + EM ++ P+E T+ S+L
Sbjct: 171 D---ARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEM---DVTPNEVTLASVLV 224
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
AC LG R G+ +H + ELN IV A++DMY KC + A +VF+ + + +
Sbjct: 225 ACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVS 284
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
W M+ GL +EA+++F+ +Q S +KPD + VL+AC G + + +
Sbjct: 285 WTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGR-WVHEYI 343
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
E I+ + + +VD + G L+ A + + MP + W +L++ HG
Sbjct: 344 ERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLK-NVSSWNALINGFALHGR 398
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 182/567 (32%), Positives = 297/567 (52%), Gaps = 72/567 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K+ K++H +++K G + + ++A G + A+ +F ++ +P++ WN++I
Sbjct: 486 VKECKRVHGYVLKLGFGSNTAVVNSLIA-AYFKFGGVESAHNLFDELSEPDVVSWNSMIN 544
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G + N + +FI ML+ ++ T S+ A+A +G G LHG VK
Sbjct: 545 GCVVNGFSGNGLEIFIQMLILG-VEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFS 603
Query: 121 FDQFIHNTIIYMYANC-------------------------------GFLSEARLMFDE- 148
+ NT++ MY+ C G S+A +FDE
Sbjct: 604 EEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEM 663
Query: 149 ------------------------VDTEFDVVAW-------------NSMIIGLAKCGEI 171
+D DV ++ N++I AKCG +
Sbjct: 664 QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSV 723
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
+E+R +F K+ ++ VSWN+MI GY +N EALELF +MQ+Q KP + TM +L AC
Sbjct: 724 EEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPAC 782
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A L A+ +G IH ++ + + V A++DMY KCG A +F+ +PKK L W
Sbjct: 783 AGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWT 842
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
M+ G M+G+ NEAI F+ ++ + ++PD SF +L AC+HSG +N+ +F M
Sbjct: 843 VMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNE 902
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
++P ++HY+C+VD L R G L +A K I SMP PD IWG LLS CR H ++++A++
Sbjct: 903 CGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEK 962
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
A+ I EL+ + + YV+++N+YA + ++EE + R M++ ++ PGCS IEV G+ +
Sbjct: 963 VAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFN 1022
Query: 472 EFVAGGRLHPKAPEVYLLLNDLGLLIQ 498
FVAG HP+A + +LL L + +Q
Sbjct: 1023 IFVAGNSKHPQAKRIDVLLRKLTMQMQ 1049
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 212/476 (44%), Gaps = 80/476 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++D K++H+ +I G++ D ++ L F GD+ +F +I +F+WN ++
Sbjct: 385 LEDGKRVHSVIISNGISIDEALGAK-LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMS 443
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+++ R ++ LF M + T+ + K +A LG ++ ++HG V+K G
Sbjct: 444 EYAKIGNFRESVSLFKKMQKLGVVG-NCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFG 502
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ + N++I Y G + A +FDE+ +E DVV+WNSMI G G +F +
Sbjct: 503 SNTAVVNSLIAAYFKFGGVESAHNLFDEL-SEPDVVSWNSMINGCVVNGFSGNGLEIFIQ 561
Query: 181 MV---------------------------------------SRNTVSWNSMISGYVRNVK 201
M+ S V N+++ Y +
Sbjct: 562 MLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGN 621
Query: 202 FKEALELFREM-------------------------------QEQNIKPSEFTMVSLLNA 230
A E+F +M Q + ++P +T+ S+++A
Sbjct: 622 LNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHA 681
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA ++ +G +H++++ N N V A+I+MY KCG E A VF+ +P K + W
Sbjct: 682 CACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSW 741
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMT 349
N+M+ G + N NEA++LF +Q KPD I+ VL AC +++ ++ + ++
Sbjct: 742 NTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILR 800
Query: 350 ETYKIKPSIKHYSC-MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
Y S H +C +VD + GLL A+ L +P D I W +++ HG
Sbjct: 801 RGYF---SDLHVACALVDMYAKCGLLVLAQLLFDMIPK-KDLISWTVMIAGYGMHG 852
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 190/442 (42%), Gaps = 86/442 (19%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRL-TYPSLFKAYAQLGLARDGAQLHGRV 114
N I F + RNAI ++L S L +Y S+ + A+ DG ++H +
Sbjct: 340 NAKINKFCEMGDLRNAI----ELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVI 395
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
+ G+ D+ + +++MY NCG D+V +
Sbjct: 396 ISNGISIDEALGAKLVFMYVNCG----------------DLV----------------QG 423
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R++FDK+++ WN ++S Y + F+E++ LF++MQ+ + + +T +L A L
Sbjct: 424 RKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAAL 483
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G +++ + +H +++ F NT VV ++I Y K G E A +F+ + + + WNSM+
Sbjct: 484 GKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMI 543
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT--------------------AC-- 332
G +NG+ +++F + ++ D + ++VL AC
Sbjct: 544 NGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFS 603
Query: 333 -------------NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
+ G +N A + F M +T +I ++ + A R GL +A
Sbjct: 604 EEVVFSNTLLDMYSKCGNLNGATEVFVKMGDT-----TIVSWTSTIAAYVREGLYSDAIG 658
Query: 380 LIRSMPSD---PDAIIWGSLLSACRKHGNIEMAKQAAKQIIE--LDKNESCGYVLMSNLY 434
L M S PD S++ AC +++ + +I+ + N L+ N+Y
Sbjct: 659 LFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALI-NMY 717
Query: 435 AASYQFEEAMEERLLMKEVKIE 456
A EEA RL+ ++ ++
Sbjct: 718 AKCGSVEEA---RLVFSKIPVK 736
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 279/494 (56%), Gaps = 36/494 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
L +IHAH+I+T L ++ + + L+ SP+ D+ Y+ VF+QI KP+ +N +IR +
Sbjct: 84 LLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIMKPSGSQYNVMIRAY 143
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
S S +P L+ +M + P L+ + K+ ++ G Q+H R+++ G + D
Sbjct: 144 SMSHSPEQGFYLYREMRRRG-VPPNPLSSSFVMKSCIRISSLMGGLQIHARILRDGHQSD 202
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ T++ +Y+ C C + +E+ ++FD++
Sbjct: 203 NLLLTTLMDLYS-C-------------------------------CDKFEEACKVFDEIP 230
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQE--QNIKPSEFTMVSLLNACAKLGAIRQG 240
+TVSWN +IS + N + ++AL +F MQ +P + T + LL ACA LGA+ G
Sbjct: 231 QWDTVSWNVLISCCIHNRRTRDALRMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFG 290
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
E +HN++ + ++ + ++I MY +CG E+A +F + ++ + W++M+ G AM+
Sbjct: 291 ERVHNYIEEHGYDGALNLCNSLITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMH 350
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
GY EAI+ F +Q + PD + VL+AC+H G V+ +F M++ + I+P+I H
Sbjct: 351 GYGREAIEAFEQMQQLGVSPDDQTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHH 410
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGRAGLL++A +LI SM PD+ +W +LL ACR H + + ++ +IEL
Sbjct: 411 YGCMVDLLGRAGLLDQAYQLIMSMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELK 470
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
E+ YVL+ N+Y++ +++ + R MKE I+ PGCS IE+ G+VHEFV LH
Sbjct: 471 AQEAGDYVLLLNIYSSVGNWDKVTDLRKFMKEKGIQTSPGCSTIELKGKVHEFVVDDILH 530
Query: 481 PKAPEVYLLLNDLG 494
P+ E+Y +L+++G
Sbjct: 531 PRTDEIYEMLDEIG 544
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 290/500 (58%), Gaps = 8/500 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H H + GL D + ++ F + GD+ A F ++ + N +I G+S+
Sbjct: 90 RQVHCHALVRGLLGDVFVLTALVDF-YAKNGDMESAVSAFDEMPVKDPIPINCLITGYSK 148
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A LF M + ++ S+ YA G R+ L R++ +G +
Sbjct: 149 AGDVDKARRLFDGME-----RRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNAI 203
Query: 125 IHNTIIYMYANCGFLSEARLMFDEV--DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
++ + A G L + + D + D +V+ +++ KC ID++RR FD+M
Sbjct: 204 TITSVFSICAKSGDLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMS 263
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ V+W++MI+GY +N + E+LELF M+ + +P+E T+V +++ACA+LG+ E
Sbjct: 264 QRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQ 323
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
I N+ L + + +A+IDMY +CG RA VF+ + +KG+ WNSM+ GLAMNG+
Sbjct: 324 IGNYAENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGF 383
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+AI L+ + + ++P+ I+F+A+L AC H+G V+Q +F M + + P ++H +
Sbjct: 384 AEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCA 443
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C+VD L ++G L EA K I M +P+A+IW +LLS+CR H ++E+AK A+++++ ++ +
Sbjct: 444 CIVDLLCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPD 503
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
S YVL+SN+YA + + +A E R LM+ ++K S I++DGEVH+F+ HP+
Sbjct: 504 NSSIYVLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPR 563
Query: 483 APEVYLLLNDLGLLIQEMGS 502
+ E+Y +++ LGLL+ S
Sbjct: 564 SAEIYDVIHGLGLLLDRADS 583
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 212/433 (48%), Gaps = 19/433 (4%)
Query: 33 PAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYP 92
PA A +F + +P + +T + S++S+ + + F M P P
Sbjct: 16 PATTSRAARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCV-P 74
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE 152
+FK+ A + G Q+H + +GL D F+ ++ YA G + A FDE+ +
Sbjct: 75 LVFKSCALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVK 134
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
D + N +I G +K G++D++RRLFD M R + SWNSMI+ Y +F+EAL LF M
Sbjct: 135 -DPIPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRM 193
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+ +P+ T+ S+ + CAK G + G+ + + + + + N IV TA+++MY KC
Sbjct: 194 LSEGARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKCRAI 252
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
+ A + F+ + ++ + W++M+ G A NG E+++LF +++++ +P+ ++ + V++AC
Sbjct: 253 DDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISAC 312
Query: 333 NHSGK---VNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
G V Q +Y E ++ + S ++D R G + A + M
Sbjct: 313 AQLGSDELVEQIGNY----AENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRM-EQKG 367
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIE--LDKNESCGYVLMSNLYAASYQ------FE 441
I W S++ +G E A +++ E + NE L++ A FE
Sbjct: 368 VITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFE 427
Query: 442 EAMEERLLMKEVK 454
E E L+ +V+
Sbjct: 428 EMKREHLVSPQVE 440
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 286/512 (55%), Gaps = 22/512 (4%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYA-YLVFTQIKKPNLFIWNTII 59
M++ K++HA ++ G+ R+LA AGD YA L+ + P+ + N ++
Sbjct: 1 MEEAKQLHARALRRGVRLLQPLLLRVLA-----AGDHRYAARLLESYPAPPSAPLHNRLL 55
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQL------HGR 113
+ P +L F S + RL P F + + H
Sbjct: 56 HALASLHRPHPLLLPFF-----SRLHRLRLLTPLSFTLLFSSSSSSASSSTPFFLCSHSL 110
Query: 114 VVKQG--LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
++K G D F+ + ++ YA L EAR +FDE+ D +N+++ AK G +
Sbjct: 111 LIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCR-DTAVYNALLSAYAKGGLV 169
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNA 230
D + +LF++M RN VSW +M+SGY +N + +EA+E F EM E+ ++P+E T+ S+L A
Sbjct: 170 DSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPA 229
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK-GLSC 289
CA +GA+ G + + N V A+++MY KCG +A QVF + ++ L
Sbjct: 230 CAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCS 289
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WNSM+ A++G EA+ LF L+ + +KPD I+F+ V+ AC H G VN+ K +F M
Sbjct: 290 WNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSME 349
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ +KP I+HY CMVD LGRAGLL E+ LI SMP +PDA+IWG+LL AC HGN+E+A
Sbjct: 350 AEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVELA 409
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGE 469
+ A ++I L+ + V++SN+YA+S +++ + L+KE +K G S IE+DG
Sbjct: 410 ELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELDGT 469
Query: 470 VHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+H+F+ + HP+ EVY LN + + ++ +G
Sbjct: 470 MHKFLVEDKSHPRFEEVYNTLNSVTMTMKLVG 501
>gi|218188961|gb|EEC71388.1| hypothetical protein OsI_03510 [Oryza sativa Indica Group]
Length = 706
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 286/514 (55%), Gaps = 20/514 (3%)
Query: 2 KDLKKIHAHLIKTGLAKDP------IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIW 55
+ L++IHAHL+ +G P +A+ + GD++YA L+ + + L
Sbjct: 107 RHLREIHAHLLVSGRIASPSHLAAFLASLASSSSDDDDDGDLSYARLLLPR-RPATLLAH 165
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG-------- 107
N+++R ++ P A F D+ P+ P ++ L +A L A
Sbjct: 166 NSLLRALARGRRPHLAFGAFRDL----PLVPDNYSFTFLVRAATALAAAAASALDAALIA 221
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
+H ++ G D + + + MYA G + AR F E+ + DVV +M+ LA
Sbjct: 222 GSVHASALRHGHAGDPHVQSGAVSMYAAAGDVGAARAAFAEIASP-DVVCVTAMVGALAT 280
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
GE D +R LFD M R+ V+WN+MI+GYV + +EAL LF EM+ E T+VS
Sbjct: 281 GGEADAARELFDGMPQRDHVAWNAMIAGYVHTGRSREALRLFDEMRHAGAAVGEVTLVSA 340
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
L ACA+LGA+ +G+W+H+ + L+ + TA+IDMY KCG A++VF+++ ++ +
Sbjct: 341 LTACAQLGALERGKWVHSCAHSRGMRLSVTLGTALIDMYSKCGAVAAAMEVFDSMGERNV 400
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
W S V GLAMNG + + LF ++S+ ++P+ ++F+ VL C+ +G V++ + F
Sbjct: 401 YTWTSAVSGLAMNGMGRDCLALFKRMESTGVEPNGVTFVVVLRGCSMAGLVDEGRACFDS 460
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
M + I P ++HY CMVD GRAG L++A I MP +P +WG+LL+A R H N+E
Sbjct: 461 MKSNHGIDPWLEHYGCMVDLYGRAGRLDDAVNFINGMPLEPHEGVWGALLNASRIHKNVE 520
Query: 408 MAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
+ K A +++ ++ +VL+SN+YA S ++ R +MK ++K PGCS IEV
Sbjct: 521 LGKYAMDKLMAIESKNDAAHVLLSNIYADSQNWKGVSNVRNMMKAKGVKKVPGCSAIEVG 580
Query: 468 GEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G+VHEF GG+ HP+ E+ ++L ++ ++ G
Sbjct: 581 GKVHEFFVGGKTHPRHKEIEMMLAEMNQRLRLQG 614
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/484 (33%), Positives = 279/484 (57%), Gaps = 36/484 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H +K G+ D ++ ++ S G + A L+F +L WN ++ GF+
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALID-VYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTV 477
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S R A+ LF ++ + ++T+ + KA L + G Q+H V+K +D F
Sbjct: 478 SDNYREALRLF-SLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLF 536
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ + I+ MY KCGE+ +R++F+++ S
Sbjct: 537 VISGILDMYL--------------------------------KCGEMKSARKVFNQIPSP 564
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V+W ++ISG V N + ++AL + +M+ ++P E+T +L+ AC+ L A+ QG+ IH
Sbjct: 565 DDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIH 624
Query: 245 -NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
N + NC + V+T+++DMY KCG E A +F + + ++ WN+M+ GLA +G
Sbjct: 625 ANIMKLNC-AFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNA 683
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ F+ ++S + PD ++FI VL+AC+HSG + A F M +TY ++P I+HYSC
Sbjct: 684 EEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSC 743
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+VDAL RAG ++EAEK++ SMP + A ++ +LL+ACR G+ E ++ A+++ +D ++
Sbjct: 744 LVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSD 803
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S YVL+SN+YAA+ Q+E A+ R +MK V ++KEPG S I++ +VH FVAG R H +
Sbjct: 804 SAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEET 863
Query: 484 PEVY 487
+Y
Sbjct: 864 DLIY 867
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 201/408 (49%), Gaps = 41/408 (10%)
Query: 5 KKIHAHLIKTGLAK-DPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
K+IH +++ G + +A S I + AG +NYA +F Q+K+ +L WNT+I G +
Sbjct: 317 KQIHGAVVRFGWDQFVSVANSAINMYV--KAGSVNYARRMFGQMKEVDLISWNTVISGCA 374
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLAR-DGAQLHGRVVKQGLEFD 122
+S ++ LFID+L S + P + T S+ +A + L + G Q+H +K G+ D
Sbjct: 375 RSGLEECSLRLFIDLL-RSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLD 433
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ +I +Y+ G + EA L+F D FD+ +WN+M+ G
Sbjct: 434 SFVSTALIDVYSKGGKMEEAELLFHNQDG-FDLASWNAMMHGF----------------- 475
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
TVS N ++EAL LF M E+ K + T + A L ++QG+
Sbjct: 476 ---TVSDN-----------YREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQ 521
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH ++ F + V++ I+DMY KCG + A +VFN +P W +++ G NG
Sbjct: 522 IHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGE 581
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIKPSIKHY 361
E +A+ + ++ + ++PD +F ++ AC+ + Q K + +M P +
Sbjct: 582 EEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV--M 639
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ +VD + G +E+A L R M + A +W +++ +HGN E A
Sbjct: 640 TSLVDMYAKCGNIEDAYGLFRRMNTRSVA-LWNAMIVGLAQHGNAEEA 686
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 173/374 (46%), Gaps = 40/374 (10%)
Query: 39 YAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY 98
YA +F ++ +WN + + Q+ A+ F DM + S + LTY +
Sbjct: 249 YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDM-IKSRVPCDSLTYIVILSVV 307
Query: 99 AQLGLARDGAQLHGRVVKQGLEFDQFIH--NTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A L G Q+HG VV+ G +DQF+ N+ I MY
Sbjct: 308 ASLNHLELGKQIHGAVVRFG--WDQFVSVANSAINMYV---------------------- 343
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
K G ++ +RR+F +M + +SWN++ISG R+ + +L LF ++
Sbjct: 344 ----------KAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSG 393
Query: 217 IKPSEFTMVSLLNACAKLG-AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
+ P +FT+ S+L AC+ L + G +H + L++ V TA+ID+Y K G E A
Sbjct: 394 LLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+F+ L+ WN+M+ G ++ EA++LFS + K D I+F A
Sbjct: 454 ELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCL 513
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
++ Q K ++ + + + S ++D + G ++ A K+ +PS PD + W +
Sbjct: 514 VRLQQGKQIHAVVIKM-RFHYDLFVISGILDMYLKCGEMKSARKVFNQIPS-PDDVAWTT 571
Query: 396 LLSACRKHGNIEMA 409
++S C ++G E A
Sbjct: 572 VISGCVENGEEEQA 585
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 185/449 (41%), Gaps = 65/449 (14%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVF--TQIKKPNLFIWNTIIRGF 62
K+ HA ++ +GL D + ++ + G + A +F T +L +N I+ +
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITM-YAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 63 SQSS------TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+ + A +F +L S + R T LFK G L G VK
Sbjct: 92 AHTGELHDVEKTHEAFHIF-RLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVK 150
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
GL++D F+ ++ +YA + EAR++FD + DVV WN M+ + G DE
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR-DVVLWNVMMKAYVEMGAGDEVLG 209
Query: 177 LFDKM------------------VSRNTV-------------------------SWNSMI 193
LF V + TV WN +
Sbjct: 210 LFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTL 269
Query: 194 SGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFE 253
S Y++ + EA++ FR+M + + T + +L+ A L + G+ IH +V ++
Sbjct: 270 SSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWD 329
Query: 254 LNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL 313
V + I+MY K G A ++F + + L WN+++ G A +G E +++LF L
Sbjct: 330 QFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDL 389
Query: 314 QSSNLKPDYISFIAVLTACNHSGKVNQAKDY-FTLMTETYKIKPSIKHYS----CMVDAL 368
S L PD + +VL AC+ + + Y T +K I S ++D
Sbjct: 390 LRSGLLPDQFTITSVLRACS-----SLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVY 444
Query: 369 GRAGLLEEAEKLIRSMPSDPDAIIWGSLL 397
+ G +EEAE L + D W +++
Sbjct: 445 SKGGKMEEAELLFHNQDG-FDLASWNAMM 472
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 26/224 (11%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFD-EVDTEFDVVAWNSMIIGL 165
G + H +V GL D+++ N +I MYA CG L AR +FD ++ D+V +N+++
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 225
A GE+ + K EA +FR +++ + + T+
Sbjct: 92 AHTGELHDVE-------------------------KTHEAFHIFRLLRQSVMLTTRHTLS 126
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
L C G+ E + + V + + V A++++Y K A +F+ +P +
Sbjct: 127 PLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR 186
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
+ WN M+ G +E + LFS S L+PD +S +L
Sbjct: 187 DVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 158/386 (40%), Positives = 237/386 (61%), Gaps = 3/386 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K L++IHA +I++GL+ D + +R L S G I YA L+F QI+ P F WN IIR
Sbjct: 40 FKHLRQIHAKIIRSGLSNDQLL-TRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ + A++L+ +M V I + T+P + KA G +HG ++K G
Sbjct: 99 ANTINGLSEQALMLYKNM-VCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ N +I Y CG A +F+++ +VV+W ++I GL CG++ E+RR+FD+
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCGDLQEARRIFDE 216
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ S+N VSW +MI+GY+RN + +EALELF+ MQ +NI P+E+TMVSL+ AC ++G + G
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
IH++ + NC E+ + TA+IDMY KCG + A++VF T+P+K L WNSM+ L ++
Sbjct: 277 RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVH 336
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA+ LFS ++ N+KPD I+FI VL AC H V + YFT MT+ Y I P +H
Sbjct: 337 GLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH 396
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPS 386
Y CM + R+ L+EA K + + S
Sbjct: 397 YECMTELYARSNNLDEAFKSTKEVGS 422
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/502 (34%), Positives = 269/502 (53%), Gaps = 41/502 (8%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H G D +S ++ S G + A +F +I N+ W ++I G+ Q+
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDM-YSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQ 2096
Query: 68 PRNAILLFIDMLVTSP-------IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
NA+LLF D L + + S+ A +++ +HG VVK+G +
Sbjct: 2097 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 2156
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ NT++ YA KCG+ S+++FD
Sbjct: 2157 GSIGVGNTLMDAYA--------------------------------KCGQPLVSKKVFDW 2184
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M ++ +SWNSMI+ Y ++ EALE+F M + ++ + T+ ++L ACA GA+R
Sbjct: 2185 MEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRA 2244
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ IH+ ++ E N V T+IIDMYCKCG E A + F+ + +K + W +MV G M
Sbjct: 2245 GKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGM 2304
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G EA+ +F + + +KP+YI+F++VL AC+H+G V + +F M Y I+P I+
Sbjct: 2305 HGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIE 2364
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD GRAG L EA LI+ M PD ++WGSLL ACR H N+++ + AA+++ EL
Sbjct: 2365 HYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFEL 2424
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D + YVL+SNLYA + ++ + R+LMK ++ K PG SL+E+ G VH F+ G +
Sbjct: 2425 DPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKE 2484
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP +Y L L L +Q++G
Sbjct: 2485 HPHHEMIYKYLEKLTLELQKIG 2506
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 179/410 (43%), Gaps = 71/410 (17%)
Query: 38 NYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA 97
N A + + K N+ WN++I ++ A+ F + I P R ++P K+
Sbjct: 1966 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLI-PTRSSFPCTIKS 2024
Query: 98 YAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVA 157
+ L G H + G E D F+ + +I MY+ CG L +AR +FDE+ +VV+
Sbjct: 2025 CSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVS 2083
Query: 158 WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI 217
W SMI G + + D + L FK+ LE E+++ N
Sbjct: 2084 WTSMITGYVQNEQADNALLL------------------------FKDFLEEETEVEDGNN 2119
Query: 218 KP-SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
P MVS+L+AC+++ E +H F+V F+ + V ++D Y KCG P +
Sbjct: 2120 VPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSK 2179
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHS 335
+VF+ + +K WNSM+ A +G EA+++F G+ + ++ + ++ AVL AC H+
Sbjct: 2180 KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHA 2239
Query: 336 -----------------------------------GKVNQAKDYFTLMTETYKIKPSIKH 360
G+V AK F M E ++K
Sbjct: 2240 GALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEK-----NVKS 2294
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLLSACRKHGNIE 407
++ MV G G +EA + M P+ I + S+L+AC G +E
Sbjct: 2295 WTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVE 2344
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 18/265 (6%)
Query: 153 FDVVAWNSMIIGLAKCGEIDESR--RLFDKMVSRNTV-SWNSMISGYVRNVKFKEALELF 209
FD + +NS++ G+ G D S F K V ++ V SWNS+I+ R EAL F
Sbjct: 1945 FDGITYNSILFGVPS-GREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAF 2003
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
+++ + P+ + + +C+ L + G H FE + V +A+IDMY KC
Sbjct: 2004 SSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKC 2063
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL--------QSSNLKPD 321
G + A +F+ +P + + W SM+ G N + A+ LF +N+ D
Sbjct: 2064 GQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLD 2123
Query: 322 YISFIAVLTACNH-SGK-VNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
+ ++VL+AC+ SGK + + F + SI + ++DA + G ++K
Sbjct: 2124 SVVMVSVLSACSRVSGKGITEGVHGFVVKK---GFDGSIGVGNTLMDAYAKCGQPLVSKK 2180
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHG 404
+ M + D I W S+++ + G
Sbjct: 2181 VFDWM-EEKDDISWNSMIAVYAQSG 2204
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 136/326 (41%), Gaps = 37/326 (11%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H ++K G I L + G + VF +++ + WN++I ++QS
Sbjct: 2146 VHGFVVKKGF-DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 2204
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A+ +F M+ ++ +T ++ A A G R G +H +V+K LE++ +
Sbjct: 2205 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 2264
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+II MY CG + A+ FD + E +V +W +M+ G G
Sbjct: 2265 TSIIDMYCKCGRVEMAKKTFDRM-KEKNVKSWTAMVAGYGMHG----------------- 2306
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG-EWIHN 245
+ KEAL++F +M +KP+ T VS+L AC+ G + +G W +
Sbjct: 2307 --------------RAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNA 2352
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYEN 304
E ++D++ + GC A + + K W S++ + ++N
Sbjct: 2353 MKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRI--HKN 2410
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLT 330
+ + + L PD + +L+
Sbjct: 2411 VDLGEIAAQKLFELDPDNCGYYVLLS 2436
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 158/385 (41%), Positives = 237/385 (61%), Gaps = 3/385 (0%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K L++IHA +I++GL+ D + +R L S G I YA L+F QI+ P F WN IIR
Sbjct: 41 KHLRQIHAKIIRSGLSNDQLL-TRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRA 99
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ + A++L+ +M V I + T+P + KA G +HG ++K G
Sbjct: 100 NTINGLSEQALMLYKNM-VCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+ N +I Y CG A +F+++ +VV+W ++I GL CG++ E+RR+FD++
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCGDLQEARRIFDEI 217
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
S+N VSW +MI+GY+RN + +EALELF+ MQ +NI P+E+TMVSL+ AC ++G + G
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGR 277
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH++ + NC E+ + TA+IDMY KCG + A++VF T+P+K L WNSM+ L ++G
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
EA+ LFS ++ N+KPD I+FI VL AC H V + YFT MT+ Y I P +HY
Sbjct: 338 LGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHY 397
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPS 386
CM + R+ L+EA K + + S
Sbjct: 398 ECMTELYARSNNLDEAFKSTKEVGS 422
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/478 (35%), Positives = 262/478 (54%), Gaps = 40/478 (8%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSP-------I 84
S G + A +F +I N+ W ++I G+ Q+ NA+LLF D L +
Sbjct: 1188 SKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNV 1247
Query: 85 QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL 144
+ S+ A +++ +HG VVK+G + + NT++ YA
Sbjct: 1248 PLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYA---------- 1297
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
KCG+ S+++FD M ++ +SWNSMI+ Y ++ E
Sbjct: 1298 ----------------------KCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGE 1335
Query: 205 ALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
ALE+F M + ++ + T+ ++L ACA GA+R G+ IH+ ++ E N V T+II
Sbjct: 1336 ALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSII 1395
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMYCKCG E A + F+ + +K + W +MV G M+G EA+ +F + + +KP+YI
Sbjct: 1396 DMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYI 1455
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F++VL AC+H+G V + +F M Y I+P I+HY CMVD GRAG L EA LI+
Sbjct: 1456 TFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKR 1515
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
M PD ++WGSLL ACR H N+++ + AA+++ ELD + YVL+SNLYA + ++ +
Sbjct: 1516 MKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADV 1575
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R+LMK ++ K PG SL+E+ G VH F+ G + HP +Y L L L +Q++G
Sbjct: 1576 ERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIG 1633
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 179/417 (42%), Gaps = 85/417 (20%)
Query: 38 NYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA 97
N A + + K N+ WN++I ++ A+ F + I P R ++P K+
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLI-PTRSSFPCTIKS 1151
Query: 98 YAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVA 157
+ L G H + G E D F+ + +I MY+ CG L +AR +FDE+ +VV+
Sbjct: 1152 CSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVS 1210
Query: 158 WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-- 215
W SM I+GYV+N + AL LF++ E+
Sbjct: 1211 WTSM-------------------------------ITGYVQNEQADNALLLFKDFLEEET 1239
Query: 216 ------NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
N+ MVS+L+AC+++ E +H F+V F+ + V ++D Y KC
Sbjct: 1240 EVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKC 1299
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAV 328
G P + +VF+ + +K WNSM+ A +G EA+++F G+ + ++ + ++ AV
Sbjct: 1300 GQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAV 1359
Query: 329 LTACNHS-----------------------------------GKVNQAKDYFTLMTETYK 353
L AC H+ G+V AK F M E
Sbjct: 1360 LLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEK-- 1417
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLLSACRKHGNIE 407
++K ++ MV G G +EA + M P+ I + S+L+AC G +E
Sbjct: 1418 ---NVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVE 1471
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 136/326 (41%), Gaps = 37/326 (11%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H ++K G I L + G + VF +++ + WN++I ++QS
Sbjct: 1273 VHGFVVKKGF-DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 1331
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A+ +F M+ ++ +T ++ A A G R G +H +V+K LE++ +
Sbjct: 1332 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 1391
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+II MY CG + A+ FD + E +V +W +M+ G G
Sbjct: 1392 TSIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHG----------------- 1433
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG-EWIHN 245
+ KEAL++F +M +KP+ T VS+L AC+ G + +G W +
Sbjct: 1434 --------------RAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNA 1479
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYEN 304
E ++D++ + GC A + + K W S++ + ++N
Sbjct: 1480 MKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRI--HKN 1537
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLT 330
+ + + L PD + +L+
Sbjct: 1538 VDLGEIAAQKLFELDPDNCGYYVLLS 1563
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 147/352 (41%), Gaps = 56/352 (15%)
Query: 178 FDKMVSRNTV-SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
F K V ++ V SWNS+I+ R EAL F +++ + P+ + + +C+ L
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 1157
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G H FE + V +A+IDMY KCG + A +F+ +P + + W SM+ G
Sbjct: 1158 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 1217
Query: 297 LAMNGYENEAIKLFSGL--------QSSNLKPDYISFIAVLTACNH-SGK-VNQAKDYF- 345
N + A+ LF +N+ D + ++VL+AC+ SGK + + F
Sbjct: 1218 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 1277
Query: 346 -------------TLMTETYKI-KPSIKH-------------YSCMVDALGRAGLLEEA- 377
TLM K +P + ++ M+ ++GL EA
Sbjct: 1278 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 1337
Query: 378 ---EKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD-KNESCGYVLMSNL 433
++R + +A+ ++L AC G + K Q+I++D + C + ++
Sbjct: 1338 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDM 1397
Query: 434 YAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
Y + E A + MKE ++ VAG +H +A E
Sbjct: 1398 YCKCGRVEMAKKTFDRMKEKNVKSWTA------------MVAGYGMHGRAKE 1437
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 169/526 (32%), Positives = 270/526 (51%), Gaps = 70/526 (13%)
Query: 11 LIKTGLAKDPIAASRILAFCTSPAGDIN-------------------------------- 38
L+KTGL D I S L C S GD+
Sbjct: 374 LLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKA 433
Query: 39 --YAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
A +F +++ + WN II Q+ + F M + S ++P TY S+ K
Sbjct: 434 LAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASM-IHSRMEPDDFTYGSVLK 492
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A A G ++H R++K G+ FD F+ ++ MY
Sbjct: 493 ACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYC---------------------- 530
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
KCG I+++ ++ D+ + VSWN++ISG+ + ++A + F M E
Sbjct: 531 ----------KCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMG 580
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+ P FT ++L+ CA L + G+ IH ++ + + + + ++DMY KCG + +
Sbjct: 581 VNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQ 640
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
+F P + WN+M+ G A +G EA+KLF +Q N+KP++ +F++VL AC H G
Sbjct: 641 LMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMG 700
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
V++ YF +M Y + P +HYSCMVD LGR+G ++EA L++ MP + DA+IW +L
Sbjct: 701 LVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNL 760
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
LS C+ HGN+E+A++A + +++LD +S VL+SN+YA + + E R +M+ K++
Sbjct: 761 LSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLK 820
Query: 457 KEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMGS 502
KEPGCS IE+ EVH F+ G + HP+ E+Y LG+LI EM S
Sbjct: 821 KEPGCSWIELKDEVHAFLVGDKGHPRDEEIY---EKLGVLIGEMQS 863
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 192/390 (49%), Gaps = 36/390 (9%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFID 77
+D ++ + I++ S G+++ A F ++ + ++ WN++I GF Q+ R +I +F++
Sbjct: 113 RDVVSYNSIISGYAS-CGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLE 171
Query: 78 MLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCG 137
M + R + + KA L G Q+HG VVK G + D + ++ MYA
Sbjct: 172 M-GRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYA--- 227
Query: 138 FLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYV 197
KC +D+S +F ++ +N VSW++MI+G V
Sbjct: 228 -----------------------------KCKRLDDSLSVFSELPEKNWVSWSAMIAGCV 258
Query: 198 RNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTI 257
+N + E LELF+EMQ + S+ SL +CA L A+R G+ +H+ + + F + I
Sbjct: 259 QNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDII 318
Query: 258 VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN 317
V TA +DMY KCG A +V +++PK L +N+++ G A + +A+K F L +
Sbjct: 319 VGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTG 378
Query: 318 LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEA 377
L D I+ L AC + + L ++ + +I + ++D G+ L EA
Sbjct: 379 LGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMS-NICVANAILDMYGKCKALAEA 437
Query: 378 EKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
L M DA+ W ++++AC ++GN E
Sbjct: 438 SDLF-DMMERRDAVSWNAIIAACEQNGNEE 466
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 155/296 (52%), Gaps = 2/296 (0%)
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T+ +++ ++ G Q H R++ G E F+ N ++ MY C +L A +FD++
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
DVV++NS+I G A CGE+D +R+ F +M R+ VSWNS+ISG+++N + ++++++F
Sbjct: 111 YLR-DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVF 169
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
EM + ++ +L AC L G +H +V F+ + + +A++ MY KC
Sbjct: 170 LEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKC 229
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
+ +L VF+ +P+K W++M+ G N E ++LF +Q + + ++
Sbjct: 230 KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLF 289
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+C + K+ + ++ I + +D + G + +A+K++ SMP
Sbjct: 290 RSCAALSALRLGKELHSHALKS-AFGSDIIVGTATLDMYAKCGRMADAQKVLSSMP 344
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 186/447 (41%), Gaps = 69/447 (15%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H ++K G D + S +L + ++ + VF+++ + N W+ +I G Q+
Sbjct: 202 QVHGLVVKFGFDCDVVTGSALLGM-YAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQN 260
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ LF +M Q + Y SLF++ A L R G +LH +K D +
Sbjct: 261 DRNVEGLELFKEMQGVGVGVSQSI-YASLFRSCAALSALRLGKELHSHALKSAFGSDIIV 319
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ MYA KCG + +++++ M +
Sbjct: 320 GTATLDMYA--------------------------------KCGRMADAQKVLSSMPKCS 347
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
S+N++I GY R+ + +AL+ F+ + + + E T+ LNACA + +G +H
Sbjct: 348 LQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHG 407
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
V + N V AI+DMY KC A +F+ + ++ WN+++ NG E E
Sbjct: 408 LAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEE 467
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
+ F+ + S ++PD ++ +VL AC +N + T + ++ S + +V
Sbjct: 468 TLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVG-AALV 526
Query: 366 DALGRAGLLEEAEKL----------------------------------IRSMPSDPDAI 391
D + G++E+A+K+ + M +PD
Sbjct: 527 DMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNF 586
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ ++L C + + KQ QII+
Sbjct: 587 TYAAVLDTCANLATVGLGKQIHAQIIK 613
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IHA +IK L D S ++ S G++ + L+F + + WN ++ G++
Sbjct: 605 KQIHAQIIKQELQSDVYICSTLVDM-YSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAH 663
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQ 123
A+ LF M + + ++P T+ S+ +A A +GL G ++ + GL+
Sbjct: 664 HGLGEEALKLFESMQLVN-VKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQS 722
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
++ ++ + G + EA + ++ E D V W +++
Sbjct: 723 EHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLL 761
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 213 QEQNIKPSEF-TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
Q Q P++ T + C+K ++ G+ H ++ FE T V ++ MY KC
Sbjct: 40 QNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLY 99
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ A +VF+ + + + +NS++ G A G + A K F + + D +S+ +V++
Sbjct: 100 LDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMP----ERDVVSWNSVISG 155
Query: 332 CNHSGKVNQAKDYFTLM 348
+G+ ++ D F M
Sbjct: 156 FLQNGECRKSIDVFLEM 172
>gi|414873430|tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/500 (35%), Positives = 271/500 (54%), Gaps = 14/500 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IH L K GL L + G +A +F ++ P L + R + S
Sbjct: 32 EIHGLLFKEGLLHAGAHLPTALLSAYAALGRPRHARDLFDEMPDPGLVSRTAMARAHAAS 91
Query: 66 STPRNAILLFIDMLVTS--PIQPQRLTYPSLFKAYAQL---GLA---RDGAQLHGRVVKQ 117
A+ +F DM+ P + A L G+A R G +H +V
Sbjct: 92 GQAAQALAVFRDMIADGVLPDNVALAVALAACHTTASLPAAGMAAARRPGKMVHAIIVTS 151
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G+ D F+ +I +Y G L+ +R +FD + V+WN+M+ + + ++ L
Sbjct: 152 GIVPDVFVSTELIRVYGEYGELALSRRLFDAMPVR-STVSWNAMVHQYIRHSNVGDAYEL 210
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN---IKPSEFTMVSLLNACAKL 234
F M R+ VSWN+MI+GY +F EALEL R+M + + P+ TM ++L ACA
Sbjct: 211 FLAMPRRDVVSWNTMIAGYSLVGRFMEALELSRQMISPSSCPVYPNGPTMSTVLAACAGA 270
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK-KGLSCWNSM 293
G + G W+H F+ N + + ++IDMY KCG E+ALQVF P+ + L W +M
Sbjct: 271 GCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVFEKAPEARDLYSWTTM 330
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ GLAM+G +A+K+F +Q + + PD ++ + VL AC H G V++ +F + E Y
Sbjct: 331 ICGLAMHGRAADALKMFGMMQDNGIHPDDVTLVGVLNACAHCGLVDEGLRHFYSL-EKYA 389
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
I P I+HY C++D LGR G L+EA +IR+M P+A+IWG+ L+AC+ H N+E+ + AA
Sbjct: 390 ITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKPNAVIWGAFLNACKVHSNVELGEIAA 449
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
++ LD + V++S+LYA + ER M ++I+K PGCS IE+DGEVHEF
Sbjct: 450 AELTRLDPGDPWAKVMLSSLYAKLQDWNSLARERREMNNLQIKKTPGCSSIELDGEVHEF 509
Query: 474 VAGGRLHPKAPEVYLLLNDL 493
VAGG HP+ E+ +L ++
Sbjct: 510 VAGGFQHPQHGEICTVLENV 529
>gi|449527549|ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 487
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 276/466 (59%), Gaps = 12/466 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD----INYAYLVFTQIKKPNLFIWN 56
++ LK+IHAHL+ T L + P A + +L + D +YA +F +++ N+F++N
Sbjct: 20 VQHLKQIHAHLLMTYLPQSPYAIAPLLEVAATSGCDRDSFFSYACGIFKNLQQRNIFMYN 79
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL--GLARDGAQLHGRV 114
++IRG+ S P+ AIL ++D L+ + T+P L KA A + L R G +H V
Sbjct: 80 SMIRGYFLSRFPKQAILCYLD-LMDRGFLANKYTFPPLIKACALVYRELKRIGYLVHAHV 138
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
+ G E D F+ + ++ Y+ L AR++FD+ + DVV W M+ G K G+I+ +
Sbjct: 139 IVLGYENDAFVVSALVEFYSLFD-LKVARVLFDKSSGK-DVVVWTVMVDGYGKVGDIESA 196
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R LFD+M RN +SW++M++ Y R F+E L LFR+MQ++NI P++ +VS+L ACA L
Sbjct: 197 RVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVLTACAHL 256
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GAI QG W+H++ + N I+ TA++DMY KCG E AL+VF + K WN+M+
Sbjct: 257 GAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAWNAMI 316
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G AM G ++++LF + +S + +F+++L AC H+ V + ++F M Y++
Sbjct: 317 SGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQMYPVYRV 376
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMP---SDPDAIIWGSLLSACRKHGNIEMAKQ 411
+P +HY+C+VD + RAG++E+AEK + S+ DA +WG++LSACR++ NIE+ +
Sbjct: 377 QPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGAILSACRQYRNIEIGDR 436
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK 457
++ L + VL N+++ + + A E R E + +K
Sbjct: 437 IWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARSKK 482
>gi|413939596|gb|AFW74147.1| hypothetical protein ZEAMMB73_269656 [Zea mays]
Length = 524
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/461 (36%), Positives = 255/461 (55%), Gaps = 21/461 (4%)
Query: 53 FIWNTIIRGFSQSSTPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQ----------- 100
F+ N ++R + P A+ LF + P +P T+ L KA A
Sbjct: 42 FLPNQLLRSL-LPAHPLGALRLFPRLRRIIPDFRPNNYTFSFLLKAAADSSAPPYLEPES 100
Query: 101 -LGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV--DTEFDVVA 157
G LH V + ++ N +I+ YA G L AR +F DV +
Sbjct: 101 PFGSHAIVPCLHALAVVLAWDAHAYVANGLIHAYATHGVLPAARRLFGGAVASRAADVCS 160
Query: 158 WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI 217
W S++ AK G +DE+R LFD M RN V+W++M+S YV F +A+ LF +M +
Sbjct: 161 WTSLLTACAKAGHVDEARALFDGMPRRNDVAWSAMLSAYVAAGSFGDAVRLFEDMLRSCV 220
Query: 218 KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC---FELNTIVVTAIIDMYCKCGCPER 274
+P+ +V +L AC LGA+ QG W+H LV ++ +V TA++DMY KCG E
Sbjct: 221 RPNRAAVVGVLTACGALGALDQGRWVHALLVGGGGHGVAMDGVVATALVDMYAKCGSLET 280
Query: 275 ALQVFNTVPK--KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
A QVF P+ + + + +M+ GL+ +G EAI LF + ++P+ ++FI VLTAC
Sbjct: 281 ARQVFAAAPRGQRDVFAYTAMISGLSDHGRCGEAIDLFGQMLVEGVRPNEVTFICVLTAC 340
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+G V +AK+ F M + ++P ++HY C+VD LGRAG L +A + +RSMP PD+ +
Sbjct: 341 GRAGLVGRAKEVFRSMGAVHGMEPGVEHYGCLVDVLGRAGQLADALEAVRSMPMRPDSYV 400
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
G+LL+AC HG++E +Q + + EL + S +V +SN+YA ++EE ++ R M+E
Sbjct: 401 LGALLNACAAHGDVEAGEQVVRWLAELGLDHSGVHVQLSNMYAGWGKWEEVLKVRRDMEE 460
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
++ K PGCS++EV G V EFVAG R HP PE+ DL
Sbjct: 461 RRVAKVPGCSMLEVGGVVCEFVAGDRSHPLMPEIMSASRDL 501
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 147/349 (42%), Gaps = 48/349 (13%)
Query: 17 AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFI 76
A D + + +L C AG ++ A +F + + N W+ ++ + + + +A+ LF
Sbjct: 155 AADVCSWTSLLTACAK-AGHVDEARALFDGMPRRNDVAWSAMLSAYVAAGSFGDAVRLFE 213
Query: 77 DMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV---KQGLEFDQFIHNTIIYMY 133
DML S ++P R + A LG G +H +V G+ D + ++ MY
Sbjct: 214 DML-RSCVRPNRAAVVGVLTACGALGALDQGRWVHALLVGGGGHGVAMDGVVATALVDMY 272
Query: 134 ANCGFLSEARLMFDEVDT-EFDVVAWNSMIIGLAKCGEIDESRRLFDKM----VSRNTVS 188
A CG L AR +F + DV A+ +MI GL+ G E+ LF +M V N V+
Sbjct: 273 AKCGSLETARQVFAAAPRGQRDVFAYTAMISGLSDHGRCGEAIDLFGQMLVEGVRPNEVT 332
Query: 189 WNSMISGYVRNVKFKEALELFREM---------------------------------QEQ 215
+ +++ R A E+FR M +
Sbjct: 333 FICVLTACGRAGLVGRAKEVFRSMGAVHGMEPGVEHYGCLVDVLGRAGQLADALEAVRSM 392
Query: 216 NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
++P + + +LLNACA G + GE + +L + + + V + +MY G E
Sbjct: 393 PMRPDSYVLGALLNACAAHGDVEAGEQVVRWLAELGLDHSGVHVQ-LSNMYAGWGKWEEV 451
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
L+V + ++ + + V G +M + +G +S L P+ +S
Sbjct: 452 LKVRRDMEERRV----AKVPGCSMLEVGGVVCEFVAGDRSHPLMPEIMS 496
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 272/501 (54%), Gaps = 35/501 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K ++IH +IK G D + +L+ + G + A VF +I K N+ WN +I
Sbjct: 423 LKQGRQIHDRIIKAGYITDDRVRTALLSM-YAKCGSLMDARNVFERISKQNVVAWNAMIT 481
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ Q NA+ F L+ I+P T+ S+ G + +++ G E
Sbjct: 482 AYVQHEKYDNAVATF-QALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFE 540
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D I N ++ M+ NC G++ + LF+
Sbjct: 541 SDLHIRNALVSMFVNC--------------------------------GDLMSAMNLFND 568
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VSWN++I+G+V++ + + A + F+ MQE +KP + T LLNACA A+ +G
Sbjct: 569 MPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG 628
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H + + + +V T +I MY KCG + A VF+ +PKK + W SM+ G A +
Sbjct: 629 RRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQH 688
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA++LF +Q +KPD+I+F+ L+AC H+G + + +F M + + I+P ++H
Sbjct: 689 GRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKD-FNIEPRMEH 747
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD GRAGLL EA + I M PD+ +WG+LL AC+ H ++E+A++ A++ +ELD
Sbjct: 748 YGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELD 807
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
N+ YV++SN+YAA+ ++E + R +M + + K+PG S IEVDG VH F + + H
Sbjct: 808 PNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTH 867
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ E++ L L + ++++G
Sbjct: 868 PQIEEIHAELGRLHMEMKKLG 888
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 195/404 (48%), Gaps = 38/404 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ D ++IH H+ + + D + +++ + G+ N A +F ++ +++ WN ++
Sbjct: 120 LGDGERIHNHIKFSKIQPDIFMWNMLISM-YAKCGNTNSAKQIFDEMPDKDVYSWNLLLG 178
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ Q A L + +V ++P + T+ + A A G +L ++ G +
Sbjct: 179 GYVQHRRYEEAFRLH-EQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWD 237
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ +I M+ KCG +D++ ++F+
Sbjct: 238 TDLFVGTALINMHI--------------------------------KCGGVDDALKVFNN 265
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ R+ ++W SMI+G R+ +FK+A LF+ M+E+ ++P + VSLL AC A+ QG
Sbjct: 266 LPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQG 325
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H + + V TA++ MY KCG E AL+VFN V + + W +M+ G A +
Sbjct: 326 KRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQH 385
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIKPSIK 359
G EA F+ + S ++P+ ++F+++L AC+ + Q + + ++ Y ++
Sbjct: 386 GRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR 445
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
+ ++ + G L +A + + S + + W ++++A +H
Sbjct: 446 --TALLSMYAKCGSLMDARNVFERI-SKQNVVAWNAMITAYVQH 486
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 183/364 (50%), Gaps = 37/364 (10%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
N + S++ A+L+ + V SP IQ R TY SL + + DG ++H +
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLS--VDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHI 130
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
++ D F+ WN +I AKCG + +
Sbjct: 131 KFSKIQPDIFM--------------------------------WNMLISMYAKCGNTNSA 158
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
+++FD+M ++ SWN ++ GYV++ +++EA L +M + +KP ++T V +LNACA
Sbjct: 159 KQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADA 218
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
+ +G + + ++ ++ + V TA+I+M+ KCG + AL+VFN +P++ L W SM+
Sbjct: 219 KNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMI 278
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GLA + +A LF ++ ++PD ++F+++L ACNH + Q K M E +
Sbjct: 279 TGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEV-GL 337
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
I + ++ + G +E+A ++ ++ + + W ++++ +HG +E A
Sbjct: 338 DTEIYVGTALLSMYTKCGSMEDALEVF-NLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFN 396
Query: 415 QIIE 418
++IE
Sbjct: 397 KMIE 400
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 174/375 (46%), Gaps = 35/375 (9%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A VF + + +L W ++I G ++ + A LF ++ +QP ++ + SL
Sbjct: 254 GGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLF-QVMEEEGVQPDKVAFVSL 312
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
KA G ++H R+ + GL+ + ++ ++ MY
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYT-------------------- 352
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
KCG ++++ +F+ + RN VSW +MI+G+ ++ + +EA F +M E
Sbjct: 353 ------------KCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIE 400
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
I+P+ T +S+L AC++ A++QG IH+ ++ + + V TA++ MY KCG
Sbjct: 401 SGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMD 460
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VF + K+ + WN+M+ + + A+ F L +KPD +F ++L C
Sbjct: 461 ARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+ K +L+ + + + +V G L A L MP + D + W
Sbjct: 521 PDALELGKWVQSLIIRA-GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWN 578
Query: 395 SLLSACRKHGNIEMA 409
++++ +HG + A
Sbjct: 579 TIIAGFVQHGENQFA 593
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 144/345 (41%), Gaps = 48/345 (13%)
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+NT N+ ++ + + EA+ + + +I+ T SLL C K + GE I
Sbjct: 67 KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
HN + + + + + +I MY KCG A Q+F+ +P K + WN ++ G +
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE----------TYK 353
EA +L + +KPD +F+ +L AC + V++ + F+L+ T
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTAL 246
Query: 354 IKPSIK--------------------HYSCMVDALGRAGLLEEAEKLIRSMPSD---PDA 390
I IK ++ M+ L R ++A L + M + PD
Sbjct: 247 INMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDK 306
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIE--LDKNESCGYVLMSNLYAASYQFEEAMEERL 448
+ + SLL AC +E K+ ++ E LD G L+S +Y E+A+E
Sbjct: 307 VAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLS-MYTKCGSMEDALEVFN 365
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
L+K G +++ + F GR+ E +L N +
Sbjct: 366 LVK--------GRNVVSWTAMIAGFAQHGRME----EAFLFFNKM 398
>gi|242083462|ref|XP_002442156.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
gi|241942849|gb|EES15994.1| hypothetical protein SORBIDRAFT_08g015260 [Sorghum bicolor]
Length = 557
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 280/530 (52%), Gaps = 44/530 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQI---KKPNLFIWNTIIRG 61
+++ A L+ GL AA ++A SP +A VF N+++W I
Sbjct: 30 RQLQAQLLVRGLPLPARAAVALIASSHSP----RHARAVFDSAVPAASENVYLWTATIAA 85
Query: 62 FSQS-----STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+++ S A+ LF ML +P T S+ + + L R+G Q+HG +
Sbjct: 86 YARHASSSLSAAEGALALFRLMLRRGVPRPNAFTASSVVRCCSALRAVREGIQVHGFLFS 145
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
GL + ++ MY + G +++AR +FDE+ + +VV N+M+ + G+++ R
Sbjct: 146 AGLGRASHVGAALVDMYGSLGRVADARRVFDEMPST-NVVLGNTMVACYVRAGDVEAGRD 204
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI------------------- 217
+FD+M R+ +SWN+++ GY+R + A +LF EM ++N+
Sbjct: 205 VFDRMAERDPISWNTLMMGYLRQGEAGVARDLFEEMPDRNVNSWNMVIAACSQEGLWADA 264
Query: 218 ------------KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
+P TM L++ACA+LG++ +H L C E+N V+ ++IDM
Sbjct: 265 VEVFNRMRLARFQPDPATMAVLMSACAQLGSLSIASQVHGILRKGCVEMNFHVLNSLIDM 324
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y KCG +A +F K +N M+ LA +G+ +A+++F + L+PD ++F
Sbjct: 325 YAKCGSVSQAHLLFVETRLKDTVSYNVMICALAQHGHGRDALQIFDEMSEEGLQPDAVTF 384
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ VL+AC H+G V+ K YF M Y I+ S HY+CMVD GRAGL+EEA +L R+MP
Sbjct: 385 LGVLSACAHAGLVHDGKFYFESMRTNYAIEQSPDHYACMVDLYGRAGLIEEAYQLARAMP 444
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
P A +WG+L++ACRKH N+E+ K AA+++I ++ YVL++N A Q++
Sbjct: 445 VKPHAGVWGALINACRKHCNVEVGKVAARELIAIEPGNPGTYVLLANTLARGQQWDFVET 504
Query: 446 ERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGL 495
M+ IEK GCS +EVD VHEF+ G HP + E+Y +L L L
Sbjct: 505 VWQSMRGKGIEKTAGCSWLEVDRVVHEFLMGESSHPNSDEIYCILEHLYL 554
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/498 (33%), Positives = 271/498 (54%), Gaps = 43/498 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H LIK G +P + ++ S G + AY +F ++ + N+ W ++I G+
Sbjct: 156 EQVHCFLIKCGFRGNPFVGTTLIDM-YSAGGTVGDAYKIFCEMFERNVVAWTSMINGYIL 214
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S+ +A LF + P+R D
Sbjct: 215 SADLVSARRLF-------DLAPER---------------------------------DVV 234
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ Y G + EAR +F E+ DV+ WN+++ G A G ++ LF++M R
Sbjct: 235 LWNIMVSGYIEGGDMVEARKLFHEMPNR-DVMFWNTVLKGYATNGNVEALEGLFEEMPER 293
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N SWN++I GY N F E L F+ M E ++ P++ T+V++L+ACA+LGA+ G+W+
Sbjct: 294 NIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWV 353
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H + ++ + N V A++DMY KCG E A+ VF + K L WN+++ GLAM+
Sbjct: 354 HVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRG 413
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+A+ LF ++++ KPD I+FI +L AC H G V YF M + Y I P I+HY C
Sbjct: 414 ADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGC 473
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD L RAG LE+A +R MP + D +IW LL ACR + N+E+A+ A +++IEL+
Sbjct: 474 MVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKN 533
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
YV++SN+Y + ++E+ ++ M++ +K PGCSLIEV+ V EF + HP+
Sbjct: 534 PANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQI 593
Query: 484 PEVYLLLNDLGLLIQEMG 501
E+Y +L L +++ G
Sbjct: 594 EEIYGVLRGLVKVLRSFG 611
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 189/403 (46%), Gaps = 45/403 (11%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K + +I A +I G + +++ C + + YA +F QI PN+ +WN++ RG
Sbjct: 52 KQVHQIQAQIIANGFQYNEYITPKLVTICAT-LKRMTYARQLFDQIPDPNIALWNSMFRG 110
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++QS + R + LF M I+P T+P + K+ ++ +G Q+H ++K G
Sbjct: 111 YAQSESYREVVFLFFQMKGMD-IRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRG 169
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ F+ T+I MY+ G + +A +F E+ E +VVAW SMI G ++ +RRLFD
Sbjct: 170 NPFVGTTLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMINGYILSADLVSARRLFDLA 228
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ V WN M+SGY+ EA +LF EM +++
Sbjct: 229 PERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDV------------------------ 264
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+ ++ Y G E +F +P++ + WN+++ G A NG
Sbjct: 265 ---------------MFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNG 309
Query: 302 YENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
E + F + S S++ P+ + + VL+AC G ++ K + + E+ +K ++
Sbjct: 310 LFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGK-WVHVYAESSGLKGNVYV 368
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
+ ++D + G++E A + R M + D I W +L+ H
Sbjct: 369 GNALMDMYAKCGIIENAISVFRGMDTK-DLISWNTLIGGLAMH 410
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 135/332 (40%), Gaps = 75/332 (22%)
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
ID L P P RL ++ Q+ +++ G +++++I ++ + A
Sbjct: 25 IDYLAPKP--PHRLLEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICAT 82
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
++ AR +LFD++ N WNSM G
Sbjct: 83 LKRMTYAR--------------------------------QLFDQIPDPNIALWNSMFRG 110
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN 255
Y ++ ++E + LF +M+ +I+P+ FT +L +C K+ A+ +GE +H FL+ F N
Sbjct: 111 YAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGN 170
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
V T +IDMY G A ++F + ++ + W SM+ NGY
Sbjct: 171 PFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMI-----NGYI------------ 213
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLE 375
L D +S A+ F L E + ++ MV G +
Sbjct: 214 --LSADLVS----------------ARRLFDLAPER-----DVVLWNIMVSGYIEGGDMV 250
Query: 376 EAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
EA KL MP+ D + W ++L +GN+E
Sbjct: 251 EARKLFHEMPNR-DVMFWNTVLKGYATNGNVE 281
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 108/257 (42%), Gaps = 41/257 (15%)
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
E +SLL +C + Q I ++ N F+ N + ++ + A Q+F+
Sbjct: 38 EERFISLLQSCKTSKQVHQ---IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFD 94
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
+P ++ WNSM G A + E + LF ++ +++P+ +F VL +C GK+N
Sbjct: 95 QIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSC---GKINA 151
Query: 341 AKD----YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
+ + L+ ++ P + + ++D G + +A K+ M + + + W S+
Sbjct: 152 LIEGEQVHCFLIKCGFRGNPFVG--TTLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSM 208
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
++ GY+L ++L +A F+ A E +++ + +
Sbjct: 209 IN---------------------------GYILSADLVSARRLFDLAPERDVVLWNIMVS 241
Query: 457 KE-PGCSLIEVDGEVHE 472
G ++E HE
Sbjct: 242 GYIEGGDMVEARKLFHE 258
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 172/478 (35%), Positives = 278/478 (58%), Gaps = 28/478 (5%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKA 97
A +F ++ + N WN ++ G+ Q+ A +F M P+R +++ ++ +
Sbjct: 13 ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKM-------PERNVVSWTAMIRG 65
Query: 98 YAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVA 157
Y Q GL + L R+ ++ + + +I G + EAR +FD + + DVVA
Sbjct: 66 YVQEGLIEEAELLFWRMPERNVVSWTVMLGGLI----EDGRVDEARQLFDMMPVK-DVVA 120
Query: 158 WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG-------------YVRNVKFKE 204
+MI GL G + E+R +FD+M RN V+W SMISG Y R E
Sbjct: 121 STNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELE 180
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
AL LF MQ + ++PS +++S+L+ C L ++ G +H+ LV + F+++ V + +I
Sbjct: 181 ALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLIT 240
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
MY KCG A +VF+ K + WNS++ G A +G+ +A+++F + SS++ PD I+
Sbjct: 241 MYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEIT 300
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
FI VL+AC+++GKV + + F M Y++ P +HY+CMVD LGRAG L EA LI +M
Sbjct: 301 FIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENM 360
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
P + DAI+WG+LL ACR H N+++A+ AAK++++L+ N + Y+L+SNLY++ ++++ +
Sbjct: 361 PVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVV 420
Query: 445 EERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL-HPKAPEVYLLLNDLGLLIQEMG 501
E R M+ + K PGCS IEVD +VH F GG HP+ + L LG L++E G
Sbjct: 421 ELRKTMRAKNLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAG 478
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 46/277 (16%)
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
E+R+LFDKM NT+SWN ++SGYV+N EA ++F +M E+N+ + +++
Sbjct: 12 EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNV----VSWTAMIRGYV 67
Query: 233 KLGAIRQGE---W-----------------IHNFLVTNCFEL-------NTIVVTAIIDM 265
+ G I + E W I + V +L + + T +ID
Sbjct: 68 QEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDG 127
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFG-------------LAMNGYENEAIKLFSG 312
C G A ++F+ +P++ + W SM+ G G+E EA+ LFS
Sbjct: 128 LCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSL 187
Query: 313 LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAG 372
+Q ++P + S I+VL+ C ++ + + + + + I S ++ + G
Sbjct: 188 MQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRS-QFDIDIYVSSVLITMYIKCG 246
Query: 373 LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
L A+++ S D ++W S+++ +HG E A
Sbjct: 247 DLVTAKRVFDRF-SSKDIVMWNSIIAGYAQHGFGEKA 282
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 104/221 (47%), Gaps = 8/221 (3%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H+ L+++ D I S +L GD+ A VF + ++ +WN+II G++Q
Sbjct: 217 RQVHSQLVRSQFDID-IYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQ 275
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ +F DM +S I P +T+ + A + G ++G ++ +K + D
Sbjct: 276 HGFGEKALEVFHDMF-SSSIAPDEITFIGVLSACSYTGKVKEGLEIF-ESMKSKYQVDPK 333
Query: 125 IHN--TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ ++ + G L+EA + + + E D + W +++ +D + K++
Sbjct: 334 TEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLL 393
Query: 183 S---RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS 220
N + + + Y ++K+ +EL + M+ +N++ S
Sbjct: 394 QLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKS 434
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 49/213 (23%)
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
++GY +N + +EA +LF +M E
Sbjct: 1 MAGYFQNKRPREARKLFDKMPET------------------------------------- 23
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
NTI ++ Y + G A +VF+ +P++ + W +M+ G G EA LF
Sbjct: 24 --NTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWR 81
Query: 313 LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAG 372
+ N+ +S+ +L G+V++A+ F +M +K + + M+D L G
Sbjct: 82 MPERNV----VSWTVMLGGLIEDGRVDEARQLFDMMP----VKDVVASTN-MIDGLCSEG 132
Query: 373 LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
L EA ++ MP + + W S++S + G
Sbjct: 133 RLIEAREIFDEMPQR-NVVAWTSMISGEKDDGT 164
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 168/498 (33%), Positives = 271/498 (54%), Gaps = 43/498 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H LIK G +P + ++ S G + AY +F ++ + N+ W ++I G+
Sbjct: 219 EQVHCFLIKCGFRGNPFVGTTLIDM-YSAGGTVGDAYKIFCEMFERNVVAWTSMINGYIL 277
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S+ +A LF + P+R D
Sbjct: 278 SADLVSARRLF-------DLAPER---------------------------------DVV 297
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ Y G + EAR +F E+ DV+ WN+++ G A G ++ LF++M R
Sbjct: 298 LWNIMVSGYIEGGDMVEARKLFXEMPNR-DVMFWNTVLKGYATNGNVEALEGLFEEMPER 356
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N SWN++I GY N F E L F+ M E ++ P++ T+V++L+ACA+LGA+ G+W+
Sbjct: 357 NIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWV 416
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H + ++ + N V A++DMY KCG E A+ VF + K L WN+++ GLAM+
Sbjct: 417 HVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRG 476
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+A+ LF ++++ KPD I+FI +L AC H G V YF M + Y I P I+HY C
Sbjct: 477 ADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGC 536
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD L RAG LE+A +R MP + D +IW LL ACR + N+E+A+ A +++IEL+
Sbjct: 537 MVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKN 596
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
YV++SN+Y + ++E+ ++ M++ +K PGCSLIEV+ V EF + HP+
Sbjct: 597 PANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQI 656
Query: 484 PEVYLLLNDLGLLIQEMG 501
E+Y +L L +++ G
Sbjct: 657 EEIYGVLRGLVKVLRSFG 674
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 189/403 (46%), Gaps = 45/403 (11%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K + +I A +I G + +++ C + + YA +F QI PN+ +WN++ RG
Sbjct: 115 KQVHQIQAQIIANGFQYNEYITPKLVTICAT-LKRMTYARQLFDQIPDPNIALWNSMFRG 173
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++QS + R + LF M I+P T+P + K+ ++ +G Q+H ++K G
Sbjct: 174 YAQSESYREVVFLFFQMKGMD-IRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRG 232
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ F+ T+I MY+ G + +A +F E+ E +VVAW SMI G ++ +RRLFD
Sbjct: 233 NPFVGTTLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMINGYILSADLVSARRLFDLA 291
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ V WN M+SGY+ EA +LF EM +++
Sbjct: 292 PERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDV------------------------ 327
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+ ++ Y G E +F +P++ + WN+++ G A NG
Sbjct: 328 ---------------MFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNG 372
Query: 302 YENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
E + F + S S++ P+ + + VL+AC G ++ K + + E+ +K ++
Sbjct: 373 LFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGK-WVHVYAESSGLKGNVYV 431
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
+ ++D + G++E A + R M + D I W +L+ H
Sbjct: 432 GNALMDMYAKCGIIENAISVFRGMDTK-DLISWNTLIGGLAMH 473
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 108/234 (46%), Gaps = 41/234 (17%)
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R+LFD++ N WNSM GY ++ ++E + LF +M+ +I+P+ FT +L +C K
Sbjct: 152 ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGK 211
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ A+ +GE +H FL+ F N V T +IDMY G A ++F + ++ + W SM
Sbjct: 212 INALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSM 271
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
+ NGY L D +S A+ F L E
Sbjct: 272 I-----NGYI--------------LSADLVS----------------ARRLFDLAPER-- 294
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ ++ MV G + EA KL MP+ D + W ++L +GN+E
Sbjct: 295 ---DVVLWNIMVSGYIEGGDMVEARKLFXEMPNR-DVMFWNTVLKGYATNGNVE 344
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 95/222 (42%), Gaps = 37/222 (16%)
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
+Q I ++ N F+ N + ++ + A Q+F+ +P ++ WNSM G
Sbjct: 115 KQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGY 174
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ----AKDYFTLMTETYK 353
A + E + LF ++ +++P+ +F VL +C GK+N + + L+ ++
Sbjct: 175 AQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSC---GKINALIEGEQVHCFLIKCGFR 231
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
P + + ++D G + +A K+ M + + + W S+++
Sbjct: 232 GNPFVG--TTLIDMYSAGGTVGDAYKIFCEM-FERNVVAWTSMIN--------------- 273
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
GY+L ++L +A F+ A E +++ + +
Sbjct: 274 ------------GYILSADLVSARRLFDLAPERDVVLWNIMV 303
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 280/504 (55%), Gaps = 47/504 (9%)
Query: 9 AHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNL----FIWNTIIRGFSQ 64
A L+K+GL + + +R+ F S + + T + +P++ F+ NT+IR +
Sbjct: 43 AFLLKSGLHANSLVLTRL--FAASASAAPALLDPLVTALLRPSVPLDAFLANTLIR--AH 98
Query: 65 SSTPRNAILL----FIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD-GAQLHGRVVKQGL 119
+++P +++ L F +++ + P + T+P L KA A L + D G Q H +K G
Sbjct: 99 ATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGF 158
Query: 120 EFDQFIHNTIIYMYA--NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
DQ++ NT+I+MY+ GFL +AR +
Sbjct: 159 ATDQYVSNTLIHMYSCFGGGFLGDAR--------------------------------NV 186
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD+M + V+W++MI GYVR +A++LFREMQ ++ E T++ +L A LGA+
Sbjct: 187 FDRMPKESAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGAL 246
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
W+ F+ + + A+ID KCG + A+ VF + ++ + W S++ L
Sbjct: 247 ELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDAL 306
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AM G EA+++F ++ + + PD ++FI VLTAC+H+G V++ YF M Y I+P
Sbjct: 307 AMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPK 366
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY CMVD GRAG++E A + +R+MP P+ +IW SL+SACR HG +E+ + + ++
Sbjct: 367 IEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLL 426
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
Y+++SN++A + +++E E R M + I+K PGCS++E+DGEVHEF+AG
Sbjct: 427 HEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGD 486
Query: 478 RLHPKAPEVYLLLNDLGLLIQEMG 501
HP+ ++Y ++ ++ ++ +G
Sbjct: 487 ESHPQYKDIYRMVEEMARELRRVG 510
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 162/499 (32%), Positives = 283/499 (56%), Gaps = 5/499 (1%)
Query: 5 KKIHAHLIKTGLAK-DPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
KKIHA ++K+GL + P+ + + A+ + A+ +F ++ + + W +I+ ++
Sbjct: 22 KKIHAQIVKSGLNQCQPLPNTLLDAY--GKCNLLQDAHYLFDEMPQRDHVSWASILTAYN 79
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
Q+ P + +F M T +QP Y +L KA A L R G Q+H R V D
Sbjct: 80 QAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDD 139
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ ++++ MYA CG S AR +FD + + V +W +M+ G A+ G DE+ LF +
Sbjct: 140 VVKSSLVDMYAKCGLPSIARSVFDSILVKTSV-SWTAMLSGYARSGLKDEAMELFLRTPV 198
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSE-FTMVSLLNACAKLGAIRQGEW 242
RN SW ++ISG V++ + +F EM+ + + + + S++ ACA L + G+
Sbjct: 199 RNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQ 258
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH ++ + +E + A++DMY KC A VFN + + + W S++ G A +G
Sbjct: 259 IHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGR 318
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
EA+ L+ + + +KP+ ++F+ ++ AC+H+G V++ + F M E Y+I PS++ ++
Sbjct: 319 AKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFT 378
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C +D L R+G L EAE LI++MP PD W +LLSAC+ HGN EM + A +++ L+ +
Sbjct: 379 CFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMH 438
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
E YVL+SN+YA + ++E+ R LM +++++++PG S I++ E F AG HP
Sbjct: 439 EPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQVFHAGETCHPM 498
Query: 483 APEVYLLLNDLGLLIQEMG 501
E++ LL +L +++ G
Sbjct: 499 KDEIFGLLKELDAEMRKRG 517
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 13/183 (7%)
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
L C K A + IH +V + + ++D Y KC + A +F+ +P++
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSN-LKPDYISFIAVLTACN-----HSGKVNQA 341
W S++ N+ + +F + +++ L+PD+ + +L AC GK A
Sbjct: 69 VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHA 128
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
+ + + +K S +VD + GL A + S+ ++ W ++LS
Sbjct: 129 RFVLSPFVDDDVVKSS------LVDMYAKCGLPSIARSVFDSILVKT-SVSWTAMLSGYA 181
Query: 402 KHG 404
+ G
Sbjct: 182 RSG 184
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 160/495 (32%), Positives = 280/495 (56%), Gaps = 39/495 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTII 59
M ++ ++H ++IK+ DP++ +L C + A + ++YA VF++I P+ +NTII
Sbjct: 1 MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTII 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R S+ P +++ F M ++ I T+P + KA ++L + LH +VK GL
Sbjct: 61 RSHSRF-FPSHSLFYFFSMR-SNGIPLDNFTFPFVLKACSRLQI---NLHLHSLIVKYGL 115
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D F+ N +I +Y CG ++ + ++FD
Sbjct: 116 DSDIFVQNALICVYG--------------------------------YCGSLEMAVKVFD 143
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIR 238
+M R++VSW+++I+ ++ N EAL+LF +MQ E + P E TM+S+++A + LG +
Sbjct: 144 EMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLE 203
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G W+ F+ ++ + TA+IDM+ +CG + ++ VF + + + W +++ GL
Sbjct: 204 LGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLG 263
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G EA+ +F ++ S ++PDY++F VL AC+H G V + D F + + Y++ P +
Sbjct: 264 VHGRSTEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLL 323
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
HY CMVD LGRAGLL EA + MP P++IIW +LL AC H N+ +A++ +I +
Sbjct: 324 DHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISK 383
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
+ +++ VL+SN+Y A+ ++ E R M+E +I KEPGCS I VD +HEFV+G
Sbjct: 384 ISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDN 443
Query: 479 LHPKAPEVYLLLNDL 493
HP++ ++ L+ +
Sbjct: 444 SHPQSEDITKFLSSI 458
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 289/500 (57%), Gaps = 9/500 (1%)
Query: 5 KKIHAHLIKTGLAKD-PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+++H+H++ + P + +L G + YA +F + N+ W + FS
Sbjct: 80 RRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFS 139
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLAR--DGAQLHGRVVKQGLEF 121
+ A++ F M S +P R+T+ + A AQ+G A G ++H GL
Sbjct: 140 HNGCHSEALVFFRRMY-QSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLP 198
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ + +I MY CG L +AR F+E+ + + V WN+M+ G E+ LF +M
Sbjct: 199 NVVVGTAVISMYGKCGRLDDARAAFEELQWK-NSVTWNAMMTNYKLDGRDREALELFREM 257
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQG 240
++V WN+MI+ Y ++ + K+AL+L+R M + ++ P + T V++++ CA+L A++QG
Sbjct: 258 HDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQG 317
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
IH + F+ N +V A++ MY KCGC + AL VF+++ K WN+++ A +
Sbjct: 318 RAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYH 377
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ ++A+ L+ + +KP ++F+ +L+AC+H G V DYF M + ++IKPS+ H
Sbjct: 378 GHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPH 437
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ C++D LGR G L EAE +++SMP +A+ W SLL AC+ HG+++ +AA Q+++
Sbjct: 438 FGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRV 497
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
S GYVL+SN+YAA+ ++++ + R +M ++K PG S IE+ VHEFV+G H
Sbjct: 498 PWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSH 557
Query: 481 PKAPEVYLLLNDLGLLIQEM 500
P+ E+Y+ +LG +++EM
Sbjct: 558 PQGEEIYV---ELGKMVEEM 574
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 275/498 (55%), Gaps = 36/498 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFI--WNTIIRGF 62
K++H H+ KTG +P + +++ I+ A +F + + +N+++ G+
Sbjct: 30 KQLHCHVFKTGCLLEPFVQTSLISM-YGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGY 88
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ +S ++ ++LF +M ++ +T L + G G +HG VK GL+ D
Sbjct: 89 ALNSRVKDVVVLFCEMRELG-VEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMD 147
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ N ++ MY K GEID R+LFD+M
Sbjct: 148 SSVGNCLLTMYV--------------------------------KSGEIDCGRKLFDEMP 175
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+ ++WN+MI+GY +N LEL++EM+ + P T+V +L++CA LGA+ G+
Sbjct: 176 RKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKE 235
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+ + F N + A+++MY +CG ++A +F+ +P K + W +++ G M+G
Sbjct: 236 VERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQ 295
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
A+ LF + +KPD +F++VL+AC+H+G N+ DYF +M Y ++P +HYS
Sbjct: 296 GEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYS 355
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
CMVD LGRAG L EA +LI SM D +WG+LL AC+ H N+E+A+ A +Q+IEL+
Sbjct: 356 CMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPT 415
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+ YVL+SN+Y + E + R+LM++ K++K+PGCS +E G VH F AG R HP+
Sbjct: 416 NTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQ 475
Query: 483 APEVYLLLNDLGLLIQEM 500
E+Y LN+L L++++
Sbjct: 476 TNEIYKKLNELENLVKDL 493
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 159/331 (48%), Gaps = 32/331 (9%)
Query: 79 LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF 138
++ S P T+P K+ A L L G QLH V K G + F+ ++I MY C
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 139 LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 198
+ AR +FDE +SR+L TV +NS++SGY
Sbjct: 61 IDNARKLFDEN----------------------PQSRKL--------TVCYNSLLSGYAL 90
Query: 199 NVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
N + K+ + LF EM+E ++ + TM+ L+ C G + G +H F V ++++ V
Sbjct: 91 NSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSV 150
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
++ MY K G + ++F+ +P+KGL WN+M+ G A NG N ++L+ ++S
Sbjct: 151 GNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGF 210
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
PD ++ + VL++C H G ++ K+ M E + + + +V+ R G L++A
Sbjct: 211 CPDPLTLVGVLSSCAHLGALSVGKEVERKM-EGFGFSSNPFLNNALVNMYARCGNLKKAR 269
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ MP + W +++ HG E+A
Sbjct: 270 DIFDGMPVK-SVVSWTAIIGGYGMHGQGEVA 299
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH-NFLVTNCFELNTIVVTAIIDMYCKCG 270
M P+ FT + +CA L G+ +H + T C L V T++I MY KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCL-LEPFVQTSLISMYGKCS 59
Query: 271 CPERALQVFNTVP--KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
+ A ++F+ P +K C+NS++ G A+N + + LF ++ ++ + ++ + +
Sbjct: 60 LIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGL 119
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS----CMVDALGRAGLLEEAEKLIRSM 384
+ C G + + + +K + S C++ ++G ++ KL M
Sbjct: 120 VQPCGIPGNLG-----LGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEM 174
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN-ESCGY 427
P I W ++++ ++G A ++EL K ES G+
Sbjct: 175 PRK-GLITWNAMINGYAQNG-------LANNVLELYKEMESKGF 210
>gi|222642150|gb|EEE70282.1| hypothetical protein OsJ_30444 [Oryza sativa Japonica Group]
Length = 1082
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 269/503 (53%), Gaps = 50/503 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +HAHL+++G A + A + Y + P F +N+ IR ++
Sbjct: 9 KALHAHLLRSGAL---FADPSAAGPLAAAASLASLPYALSILRAHPTTFSYNSAIRALAR 65
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD---------GAQLHGRVV 115
P AI L+ ML S P TYP L A A+L + G LH +
Sbjct: 66 GPRPHLAISLYRSMLSHSRSHPNNYTYPPLLAACARLADSDSSSAAAAAAAGVALHASLF 125
Query: 116 KQGLEF-DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
++GLE D+FI +++ +YA G L AR +FD
Sbjct: 126 RRGLESPDRFIRASLLSLYAAAGDLPAARQVFD--------------------------- 158
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R+ WNS++ Y+ + + L LFR M+ + T+++LL+ACA L
Sbjct: 159 ---LSPPNHRDLPLWNSLLHAYLSRAHYVQVLRLFRTMRTAD----HVTLLALLSACAHL 211
Query: 235 GAIRQGEWIHNFLVTNC-FELNTIVVTAIIDMYCKCGCPERALQVFNTVP--KKGLSCWN 291
GA+ W H +L T C F + T + TA+++MY +CG + A +F++ P K + W
Sbjct: 212 GALHTARWAHAYLATTCSFPITTNLATALLNMYMRCGDVQTACSLFHSTPTRHKDVHTWT 271
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
M+ GLA+NG+ +A+ LF+ ++ N++PD ++ AVL+AC H+G V++ K M
Sbjct: 272 VMIAGLALNGFSTDALHLFTHMKDHNIQPDSVTLTAVLSACTHAGMVDEGKRILRRMPLD 331
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
Y ++P+I+HY C VD LGRAGLLEEA LIR++P D +WG+LL ACR H N EM +
Sbjct: 332 YHLQPTIEHYGCTVDLLGRAGLLEEALALIRAVPFKADVALWGALLVACRCHRNFEMGQM 391
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
A +I+ LD + +V +SN+YAA+ +++ E R MK+ +I K PG S++E+DG V+
Sbjct: 392 VAMEILRLDPQHAGAWVFLSNVYAAAGKWDLVQEVRSSMKQHRIHKPPGSSVVELDGVVY 451
Query: 472 EFVAGGRLHPKAPEVYLLLNDLG 494
EF++G HP++ ++Y +L+++G
Sbjct: 452 EFLSGDHSHPQSDQIYAMLDEIG 474
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 276/481 (57%), Gaps = 3/481 (0%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
HA ++TG D + LA + G + VF + ++ W ++ + Q+
Sbjct: 173 HALAVRTGALDDGFVGT-ALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRN 231
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
+ A+LLF M S + P +L ++ A + R G +H ++ + I +
Sbjct: 232 YKEALLLFAKM-KNSGVVPDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISS 290
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
+I +YA+C + A +++E+ + D+V+ +M+ G A+ +++ +R +FD M ++ V
Sbjct: 291 ALISLYASCANMEMAEKLYNEMPRK-DLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVV 349
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
SW++MISGYV + + EAL LF MQE I+ E TM+S+++ACA LG++ + +WIH F+
Sbjct: 350 SWSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFI 409
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
+ + A+IDM+ KCG AL VFN +P K + W SM+ AM+G ++
Sbjct: 410 KNSGLNKVLHICNALIDMFAKCGGINLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSL 469
Query: 308 KLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
+LF ++ +P+ ++F+++L AC H+G V++ + F+ M + Y I+P +HY CMVD
Sbjct: 470 RLFEQMKDEGAEPNEVTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDL 529
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGY 427
LGRA L++EA LI SM +P+ IWGSLL+AC HG++++ AAK+I++LD N
Sbjct: 530 LGRAKLMQEAVSLIESMHLEPNVPIWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGAS 589
Query: 428 VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
VL+ +Y S A E R +MK ++ KE G S +E++ HEF AGG HP++ +++
Sbjct: 590 VLLLKIYMKSDNLNNAQEVRGVMKLHRVSKETGLSWMELNEPFHEFAAGGEKHPESGKIF 649
Query: 488 L 488
L
Sbjct: 650 L 650
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 152/352 (43%), Gaps = 66/352 (18%)
Query: 86 PQRLTYPSLFKAYAQL-GLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL 144
P P+L ++ A+ G A H V+ G D F+ + YA CG + + R
Sbjct: 147 PGPRALPALLRSAARCEGAGAYVAATHALAVRTGALDDGFVGTALAGAYAACGCVRDTRK 206
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+FD + DVV+W M+ Y + +KE
Sbjct: 207 VFDGMAVR-DVVSW-------------------------------GVMLDSYCQTRNYKE 234
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
AL LF +M+ + P + + ++L AC + +R G+ IH++++ + + + +A+I
Sbjct: 235 ALLLFAKMKNSGVVPDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISSALIS 294
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN------------------------ 300
+Y C E A +++N +P+K L +MV G A N
Sbjct: 295 LYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAM 354
Query: 301 --GY-----ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
GY NEA+ LF+G+Q ++ D I+ ++V++AC + G +++AK + +
Sbjct: 355 ISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAK-WIHAFIKNSG 413
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+ + + ++D + G + A + MP + I W S++SA HG+
Sbjct: 414 LNKVLHICNALIDMFAKCGGINLALNVFNEMPLK-NVITWTSMISAFAMHGD 464
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 167/478 (34%), Positives = 279/478 (58%), Gaps = 4/478 (0%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFID 77
KD ++ + IL ++ A +F ++ + N W+ +I + QS P ++ LF
Sbjct: 248 KDVVSWTAILDLYVE-MDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCR 306
Query: 78 MLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCG 137
M + +P + S+ A A + + G +HG V K G E D F+ +++I MY CG
Sbjct: 307 M-IQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCG 365
Query: 138 FLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYV 197
+ R +FD + E ++V+WN+M+ G + G ++E++ LF+ M RN VSW+++I+G++
Sbjct: 366 ETKDGRFLFDTI-LEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHL 424
Query: 198 RNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTI 257
+F E E+F EM P++ T SLL ACA ++ +G+ +H +V + +T
Sbjct: 425 DCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTY 484
Query: 258 VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ-SS 316
V TA+ DMY K G E + +VFN +PKK W +M+ GLA +G E++ LF ++ +S
Sbjct: 485 VGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTS 544
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE 376
++ P+ + F+AVL AC+HSG V++ YF M Y +KP +H++C+VD L RAG L E
Sbjct: 545 SIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFE 604
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAA 436
AE+ I SMP P+ W +LLS C+ + N E+A++ A ++ E+ + GYVL+SN+YA+
Sbjct: 605 AEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYAS 664
Query: 437 SYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLG 494
+ ++ + ++ R LMK ++K GCS +E+ VH F + H ++ E+Y +L LG
Sbjct: 665 AGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLG 722
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 223/440 (50%), Gaps = 45/440 (10%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + + F + N+ W I G+ Q+ A+ LFI +L S ++P ++T+ S+
Sbjct: 132 GRVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLL-ESEVKPNKVTFTSV 190
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
+A A LG G + G +VK G E D + N++I + G + AR +FD ++ E D
Sbjct: 191 VRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRME-EKD 249
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
VV+W +++ + E+ E+RR+FD+M RN VSW++MI+ Y ++ +E+L LF M +
Sbjct: 250 VVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQ 309
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+ KP+ S+L+A A + A++ G IH + FE + V +++IDMYCKCG +
Sbjct: 310 EGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKD 369
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLF-----------SGLQSSNLK---- 319
+F+T+ +K + WN+MV G ++NG+ EA LF S + + +L
Sbjct: 370 GRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQF 429
Query: 320 ----------------PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY-- 361
P+ +F ++L AC + +++ K+ L + K+ Y
Sbjct: 430 DEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKN---LHGKIVKLGIQCDTYVG 486
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+ + D ++G +E ++K+ MP + + W +++ + G +A+++ E++K
Sbjct: 487 TALTDMYAKSGDIESSKKVFNRMPK-KNEVSWTAMIQGLAESG---LAEESLTLFEEMEK 542
Query: 422 NESCG---YVLMSNLYAASY 438
S + ++ L+A S+
Sbjct: 543 TSSIAPNEVMFLAVLFACSH 562
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 198/468 (42%), Gaps = 98/468 (20%)
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMY------------------- 133
SL K GL RDG+ LH + K G+ +Q+I ++ MY
Sbjct: 26 SLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGF 85
Query: 134 ----ANC--------GFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
NC G L EAR +FDE+ + + ++W ++I G K G + ES F++
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEM-PQTNEISWTALISGFMKYGRVRESMWYFERN 144
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+N VSW + ISGYV+N EA++LF ++ E +KP++ T S++ ACA LG G
Sbjct: 145 PFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGM 204
Query: 242 ---------------WIHNFLVTNCFELNTIVV----------------TAIIDMYCKCG 270
+ N L+T C + I + TAI+D+Y +
Sbjct: 205 SVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMD 264
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
A ++F+ +P++ W++M+ +GY E+++LF + KP+ F ++L+
Sbjct: 265 ELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILS 324
Query: 331 AC-------------NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEA 377
A H K+ KD F S ++D + G ++
Sbjct: 325 ALASVEALQAGMNIHGHVTKIGFEKDVFV--------------SSSLIDMYCKCGETKDG 370
Query: 378 EKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
L ++ + + + W +++ +G++E AK I+ + N S ++ +L
Sbjct: 371 RFLFDTIL-EKNMVSWNAMVGGYSLNGHMEEAKYLF-NIMPVRNNVSWSAIIAGHLDCE- 427
Query: 438 YQFEEAME---ERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
QF+E E E +L+ E+ K SL+ G LH K
Sbjct: 428 -QFDEMFEVFNEMILLGEIP-NKSTFSSLLCACASTASLDKGKNLHGK 473
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 5/220 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +H ++K G+ D + L + +GDI + VF ++ K N W +I+G ++
Sbjct: 468 KNLHGKIVKLGIQCDTYVGT-ALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAE 526
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA-QLHGRVVKQGLEFDQ 123
S ++ LF +M TS I P + + ++ A + GL G + GL+
Sbjct: 527 SGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKG 586
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK--- 180
++ M + G L EA + + + AW +++ G + + R+ K
Sbjct: 587 RHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWE 646
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS 220
M +N + + + Y ++++ L++ + M+ + +K S
Sbjct: 647 MAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKS 686
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 183/551 (33%), Positives = 299/551 (54%), Gaps = 54/551 (9%)
Query: 1 MKDLKKIHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVF--------TQIKKPN 51
+ LK IH+ L G L P +R++ S GD++ A +F + PN
Sbjct: 38 LTTLKLIHSSLSTRGFLLHTPHFLARLIIL-YSKLGDLHSARTLFDHRHHHHHGHTQAPN 96
Query: 52 LFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLH 111
F+ NT++R ++ + AI L+I M + TYP + K A A G +H
Sbjct: 97 SFLCNTMLRAYANAGRSYEAIDLYIYMQRMG-VGVNNFTYPFVLKVCASELGAVFGEVVH 155
Query: 112 GRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMII-------- 163
G+VV+ G D F+ ++ MYA CG + +A +FD + DVV W +MI
Sbjct: 156 GQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIR-DVVCWTAMITLYEQAERP 214
Query: 164 ---------------------------GLAKCGE----IDESRRLFDKMVSRNTVSWNSM 192
+ + G+ I +R +FD+M RN +SWNSM
Sbjct: 215 LKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSM 274
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
+SGY +N + +AL LF +MQ P+ T + +++AC+ LG+ G +HNF++++
Sbjct: 275 LSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKM 334
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNT--VPKKGLSCWNSMVFGLAMNGYENEAIKLF 310
+++T + AI+DMY KCG + A+++FN + ++ +S WN ++ G ++G+ EA++LF
Sbjct: 335 DIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELF 394
Query: 311 SGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGR 370
S +Q ++P+ I+F ++L+AC+H+G +++ + F MT+ ++P +KHY+CMVD LGR
Sbjct: 395 SRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVDMLGR 453
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLM 430
AG L EA +LI+ +PS P +WG+LL ACR HGN E+ + AA + +L+ + YVLM
Sbjct: 454 AGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLM 513
Query: 431 SNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLL 490
SN+YAAS +++E R MK ++K S+IE EVH F + P EVY +
Sbjct: 514 SNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKV 573
Query: 491 NDLGLLIQEMG 501
L + ++ +G
Sbjct: 574 ESLAIEMKMVG 584
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 273/497 (54%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +H++ IK + + L S GD+N A VF ++ + + W ++I G+ +
Sbjct: 372 KVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVR 431
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
AI LF D + + + P S+ A A G + G +H + + LE + F
Sbjct: 432 EGLSDGAIKLF-DEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSF 490
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N + MYA KCG + ++ +F M +
Sbjct: 491 VSNALTDMYA--------------------------------KCGSMKDAHDVFSHMKKK 518
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SWN+MI GY +N EAL LF EMQ ++ KP T+ +L ACA L A+ +G IH
Sbjct: 519 DVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIH 577
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + N + + V A++DMY KCG A +F+ +P K L W M+ G M+GY +
Sbjct: 578 GYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGS 637
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EAI F+ ++ + ++PD +SFI++L AC+HSG +++ F +M + +I+P+++HY+CM
Sbjct: 638 EAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACM 697
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD L R G L +A K I++MP PDA IWG+LL CR H ++++A++ A++I EL+ +
Sbjct: 698 VDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENT 757
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL++N+YA + ++EE + R + + ++K PGCS IE+ G+++ FVAG P+A
Sbjct: 758 GYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAK 817
Query: 485 EVYLLLNDLGLLIQEMG 501
++ LLL L ++E G
Sbjct: 818 KIELLLKRLRSKMKEEG 834
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 207/476 (43%), Gaps = 79/476 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++D +++ + + +G+ D I + L F GD+ +VF ++ + +F+WN +I
Sbjct: 166 IRDGRRVRSIIESSGVMIDGILGVK-LVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMIS 224
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+S S +I LF ML I+P T+ S+ K +A + +G Q+HG + K G
Sbjct: 225 EYSGSGNYGESINLFKQMLELG-IKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFN 283
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N++I Y + A+ +FDE+ T+ DV++WNSMI G K G D +F K
Sbjct: 284 SYNTVVNSLISFYFVGRKVRCAQKLFDEL-TDRDVISWNSMISGYVKNGLDDRGIEIFIK 342
Query: 181 M----------------------------------------VSRNTVSWNSMISGYVRNV 200
M + R N+++ Y +
Sbjct: 343 MLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCG 402
Query: 201 KFKEALELFREMQEQN-------------------------------IKPSEFTMVSLLN 229
A+ +F M E+ + P + + S+LN
Sbjct: 403 DLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILN 462
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
ACA G ++ G+ +H+++ N E N+ V A+ DMY KCG + A VF+ + KK +
Sbjct: 463 ACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVIS 522
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLM 348
WN+M+ G N NEA+ LF+ +Q + KPD + +L AC +++ ++ + +
Sbjct: 523 WNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYAL 581
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
Y + + +VD + GLL A L +P + D + W +++ HG
Sbjct: 582 RNGYSEDKYVTN--AVVDMYVKCGLLVLARSLFDMIP-NKDLVSWTVMIAGYGMHG 634
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 37/298 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K K +H ++ + L + S L + G + A+ VF+ +KK ++ WNT+I
Sbjct: 470 LKSGKIVHDYIRENNLETNSFV-SNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIG 528
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G++++S P A+ LF +M S +P T + A A L G ++HG ++ G
Sbjct: 529 GYTKNSLPNEALTLFAEMQRES--KPDGTTVACILPACASLAALDKGREIHGYALRNGYS 586
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D+++ N ++ MY CG L AR +FD + + D+V+W MI G
Sbjct: 587 EDKYVTNAVVDMYVKCGLLVLARSLFDMIPNK-DLVSWTVMIAGYG-------------- 631
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ GY EA+ F +M+ I+P E + +S+L AC+ G + +G
Sbjct: 632 ------------MHGY-----GSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEG 674
Query: 241 EWIHNFLVTNC-FELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFG 296
I N + C E N ++D+ + G +A + +P K + W +++ G
Sbjct: 675 WKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCG 732
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 160/386 (41%), Gaps = 76/386 (19%)
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
Y S+ + A+ RDG ++ + G+ D + +++MY CG L E R++FD++
Sbjct: 152 AYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKL 211
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV--------------------------- 182
+E + WN MI + G ES LF +M+
Sbjct: 212 -SESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEG 270
Query: 183 -------------SRNTVSWNSMISGYVRNVKFKEALELFREMQEQN------------- 216
S NTV NS+IS Y K + A +LF E+ +++
Sbjct: 271 RQVHGLICKLGFNSYNTVV-NSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVK 329
Query: 217 -----------IKPSEF-------TMVSLLNACAKLGAIRQGEWIHNFLV-TNCFELNTI 257
IK F TMV++ ACA +G + G+ +H++ + +
Sbjct: 330 NGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVR 389
Query: 258 VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN 317
++DMY KCG A++VF + +K + W SM+ G G + AIKLF ++S
Sbjct: 390 FNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRG 449
Query: 318 LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEA 377
+ PD + ++L AC +G + K + E ++ + + + D + G +++A
Sbjct: 450 VVPDVYAVTSILNACAINGNLKSGKIVHDYIREN-NLETNSFVSNALTDMYAKCGSMKDA 508
Query: 378 EKLIRSMPSDPDAIIWGSLLSACRKH 403
+ M D I W +++ K+
Sbjct: 509 HDVFSHMKK-KDVISWNTMIGGYTKN 533
>gi|414878289|tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea mays]
Length = 534
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 177/530 (33%), Positives = 281/530 (53%), Gaps = 44/530 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKP---NLFIWNTIIRG 61
+++ L+ GL AA ++A SP +A VF N+++W I
Sbjct: 7 RQLQVQLLVRGLPLPARAAVSLIASSHSP----GHARAVFDNAVPTACENVYLWTATIAA 62
Query: 62 FSQ--SSTP---RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+++ SS+P A+ LF ML +P T S+ + + L R G Q+HG +V
Sbjct: 63 YARHASSSPSVAEGALTLFRLMLRHGVPRPNAFTASSVVRCCSALRAVRVGIQVHGFLVN 122
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
GL + + ++ MY N G +++AR +FDE+ VV N+M+ + G+++ R
Sbjct: 123 AGLGRAEHVRAALVDMYGNHGRVADARRVFDEMSAT-SVVLGNTMVACYVRAGDVESGRV 181
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI------------------- 217
+FD+MV R+ +SWN+++ GY+R A ELF EM ++N+
Sbjct: 182 VFDRMVERDLISWNTLMMGYLRQGGAGVARELFEEMPDRNVNSWNMAIAAYSQERSWADA 241
Query: 218 ------------KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
+P TM L++ACA+LG++ +H L C E+N V+ ++IDM
Sbjct: 242 VAVFNRMRLARFQPDPATMAVLMSACAQLGSLSVARQVHGILRKGCVEMNFHVLNSLIDM 301
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y KCG +A +F K +N M+ LA +G+ +A+++F + L+PD ++
Sbjct: 302 YAKCGSISQAHLLFVETHLKDTVSYNVMICALARHGHGRDALQVFDEMSKERLQPDAVTL 361
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ VL+AC H+G V+ K YF M Y I+ S HY+CMVD GRAGL++EA +L R+MP
Sbjct: 362 LGVLSACAHAGLVHDGKFYFESMKTNYAIEQSPDHYACMVDLYGRAGLIKEAYELARAMP 421
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+P A +WG+L++ACRKH N+E+ K AA+++I ++ YVL++N A Q+E
Sbjct: 422 MEPHAGVWGALINACRKHCNVEVGKVAARELIAIEPRNPGTYVLLANTLARGQQWEFVET 481
Query: 446 ERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGL 495
M+ IEK GCS +EV+ VHEF+ G HP + E+Y +L L L
Sbjct: 482 VWQSMRGKGIEKTAGCSWLEVENVVHEFLMGESSHPNSDEIYSILEHLYL 531
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 165/499 (33%), Positives = 268/499 (53%), Gaps = 37/499 (7%)
Query: 3 DLKKIHAH-LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
DL+ + H L L + I + + G + A LVF ++ + WN II
Sbjct: 392 DLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAA 451
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
Q+ + LF+ ML S ++P TY S+ KA A G ++H R++K L
Sbjct: 452 HEQNGNEEKTLSLFVWML-QSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGL 510
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+ +I MY+ KCG ++++ +L D++
Sbjct: 511 DSFVGIALIDMYS--------------------------------KCGMMEKAEKLHDRL 538
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+ VSWN++ISG+ + +EA + F +M E + P FT ++L+ CA L + G+
Sbjct: 539 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 598
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH ++ + + + + ++DMY KCG + +F P + WN+MV G A +G
Sbjct: 599 QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 658
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
EA+K+F +Q N+KP++ +F+AVL AC H G V + YF M Y + P ++HY
Sbjct: 659 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY 718
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
SC+VD +GR+G + +A +LI MP + DA+IW +LLS C+ HGN+E+A++AA I++L+
Sbjct: 719 SCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEP 778
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+S YVL+SN+YA + + E + R +M+ ++KEPGCS IE+ EVH F+ G + HP
Sbjct: 779 EDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHP 838
Query: 482 KAPEVYLLLNDLGLLIQEM 500
++ E+Y +L +L EM
Sbjct: 839 RSKEIY---ENLDVLTDEM 854
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 182/397 (45%), Gaps = 43/397 (10%)
Query: 15 GLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILL 74
G+ + + + F + GDI A +F + + ++ WN++I G+ + R I +
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
Query: 75 FIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYA 134
F+ M + R T+ + K+ + L G Q+HG VK G + D + ++ MYA
Sbjct: 162 FLQMGRMGTV-FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 135 NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMIS 194
KC ++D S + F M +N VSW+++I+
Sbjct: 221 --------------------------------KCKKLDCSIQFFHSMPEKNWVSWSAIIA 248
Query: 195 GYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFEL 254
G V+N + LELF+EMQ+ + S+ T S+ +CA L A+R G +H + F
Sbjct: 249 GCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGT 308
Query: 255 NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ 314
+ ++ TA +DMY KC A ++FN++P L +N+++ G A + EA+ +F LQ
Sbjct: 309 DVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQ 368
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL----GR 370
S L D +S AC D L +K + C+ +A+ G+
Sbjct: 369 KSGLGLDEVSLSGAFRAC-----AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGK 423
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
G L EA + M S DA+ W ++++A ++GN E
Sbjct: 424 CGALVEACLVFEEMVS-RDAVSWNAIIAAHEQNGNEE 459
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 11/315 (3%)
Query: 81 TSPIQP---------QRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIY 131
T PI P ++ T+ +F+ + G Q H R++ + F+ N +I
Sbjct: 26 TLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQ 85
Query: 132 MYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNS 191
MY C L A +FD + + D V+WN+M+ G A G+I +++LFD M R+ VSWNS
Sbjct: 86 MYIKCSDLEFAFKVFDGM-PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNS 144
Query: 192 MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
+ISGY+ N ++ +++F +M T +L +C+ L G IH V
Sbjct: 145 LISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG 204
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
F+ + + +A++DMY KC + ++Q F+++P+K W++++ G N ++LF
Sbjct: 205 FDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFK 264
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA 371
+Q + + +F +V +C + +T + + +D +
Sbjct: 265 EMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKT-DFGTDVVIGTATLDMYMKC 323
Query: 372 GLLEEAEKLIRSMPS 386
L +A+KL S+P+
Sbjct: 324 NNLSDAQKLFNSLPN 338
>gi|147772239|emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
Length = 901
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 275/501 (54%), Gaps = 28/501 (5%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M+ L +I A+LI +GL + P AS++L A D+NY L+F I P+ N +I+
Sbjct: 385 MRQLSQIQAYLIISGLFRKPFVASKVLKVSADYA-DVNYTILIFRSIDSPDTVCVNAVIK 443
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+S SS A++ + + L T+P LF + G G + HG+ +K G++
Sbjct: 444 AYSISSVAHQALVFYFETLRNG-FMCNSFTFPPLFSCCRKXGCVEYGEKFHGQAIKNGVD 502
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N++++MY CG + A +F E+ ++ D+V+WNS+I AK G + + RLFD
Sbjct: 503 NVLDVQNSMVHMYGCCGVVEXAEKVFGEM-SKRDLVSWNSIIDAYAKLGHLVLAHRLFDA 561
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M RN VSWN M+ GY++ AL+LFREM ++ E TMVS+L AC + +++G
Sbjct: 562 MPERNAVSWNIMMGGYLKGGNPGCALKLFREMANAGLRGGETTMVSVLTACCRSARLKEG 621
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
IH L+ + + I+ TA+IDMY KC + A V++ + K L CWN+M+ G ++
Sbjct: 622 RSIHGVLIRTFLKSSLILDTALIDMYSKCERVDVARVVYDRMTKXNLVCWNAMILGHCIH 681
Query: 301 GYENEAIKLF----SGLQSSN----------------LKPDYISFIAVLTACNHSGKVNQ 340
G + +KLF G++S + L PD I+FI VL AC G + +
Sbjct: 682 GNAEDGLKLFEEMVDGIRSEDGEINLDKGIKRIEGQGLJPDEITFIGVLCACAREGLLAE 741
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI-----IWGS 395
+ Y++ M T+ IKP+ HY CM + GL++EAE+++RSMP + + + W
Sbjct: 742 GRSYYSQMINTFHIKPNFAHYWCMANLFAGVGLVQEAEEILRSMPEEDEDLSWESSFWAG 801
Query: 396 LLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
LLS+CR G + + ++ A +IE + Y L+ N+YA + ++E+ + ++KE I
Sbjct: 802 LLSSCRFQGXVFLGERIATYLIESEPQNISYYRLLLNVYAVAGRWEDVARVKEMVKERGI 861
Query: 456 EKEPGCSLIEVDGEVHEFVAG 476
++ PGC+L ++ VHEF G
Sbjct: 862 KQMPGCNLADLKEIVHEFKLG 882
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 284/495 (57%), Gaps = 17/495 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++D + IH ++K G + +L F + + ++ AY VF ++ + ++ WN++I
Sbjct: 90 LEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMIS 149
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDG-AQLHGRVVKQ 117
+ ++AI L M P+R +T+ S+ GL++ G +L V +Q
Sbjct: 150 AYMTRGEIQSAIGLLDKM-------PERNIVTWNSVV-----CGLSKAGNMELAHSVFEQ 197
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
++ N++I Y G + A+ +F ++ E VV+W +MI G A G++ + +
Sbjct: 198 MPLRNEVSWNSMISGYVRIGDVRAAQSIFYQM-PEKTVVSWTAMISGYATNGDLKSAENI 256
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGA 236
F+ M +N VSWN+MISGYV N +F +AL +F M +P + T++S+L+ACA LG+
Sbjct: 257 FNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGS 316
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G+WI++++ N L+ + A+IDM+ KCG E A +VF+ + K+ + W +MV G
Sbjct: 317 LEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSG 376
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA+NG EAI LF + KPD + FIAVL+AC H G V + K F M + + IKP
Sbjct: 377 LAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKP 436
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
I+HY CMVD LGRAG LEEA + M P+A+IW +LL C+ HGN ++ K ++I
Sbjct: 437 RIEHYGCMVDLLGRAGKLEEAVRFTARMHLKPNAVIWATLLFCCKIHGNGDLLKSVTEKI 496
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
++ + + L+SNL A+ ++E+ + R+ M++ ++EK PGCS I+V VHEF+A
Sbjct: 497 MDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCSSIQVGNRVHEFLAK 556
Query: 477 GRLHPKAPEVYLLLN 491
H + E+Y L+
Sbjct: 557 DTRHVQRKEIYRALS 571
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 167/370 (45%), Gaps = 44/370 (11%)
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCG-FLSEA 142
++ T+ L K + DG +HG ++K G F+ N+++ YANC L A
Sbjct: 70 VEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSENLGSA 129
Query: 143 RLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKF 202
+F+E+ E DV++WNSMI GEI + L DKM RN V+WNS++ G +
Sbjct: 130 YRVFEEM-PERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTWNSVVCGLSKAGNM 188
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAI 262
+ A +F +M +N E + S+++ ++G +R + I + E + TA+
Sbjct: 189 ELAHSVFEQMPLRN----EVSWNSMISGYVRIGDVRAAQSIFYQMP----EKTVVSWTAM 240
Query: 263 IDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG-LQSSNLKPD 321
I Y G + A +FN +P K + WN+M+ G N ++A+ +F L + +PD
Sbjct: 241 ISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPD 300
Query: 322 YISFIAVLTACNHSGKVNQAK----------------------DYFTLMTETYKIKPSIK 359
+ I++L+AC H G + K D F + K
Sbjct: 301 QTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFH 360
Query: 360 H--------YSCMVDALGRAGLLEEAEKLIRSM---PSDPDAIIWGSLLSACRKHGNIEM 408
H ++ MV L G EA L M + PD +I+ ++LSAC G +E
Sbjct: 361 HMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEE 420
Query: 409 AKQAAKQIIE 418
K+ Q+++
Sbjct: 421 GKRVFDQMVQ 430
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 104/243 (42%), Gaps = 14/243 (5%)
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAI 262
KEAL ++ M+ ++ + FT LL A+ G IH ++ F + V ++
Sbjct: 56 KEALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSL 115
Query: 263 IDMYCKCG-CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
+ Y C A +VF +P++ + WNSM+ G AI L + N+
Sbjct: 116 LGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNI--- 172
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
+++ +V+ + +G + A F M ++ ++ M+ R G + A+ +
Sbjct: 173 -VTWNSVVCGLSKAGNMELAHSVFEQMPLRNEVS-----WNSMISGYVRIGDVRAAQSIF 226
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
MP + + W +++S +G++ K A + + M + Y +++F+
Sbjct: 227 YQMP-EKTVVSWTAMISGYATNGDL---KSAENIFNHMPVKNVVSWNAMISGYVHNHEFD 282
Query: 442 EAM 444
+A+
Sbjct: 283 QAL 285
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/495 (32%), Positives = 283/495 (57%), Gaps = 39/495 (7%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H +I+ GL +D + ++ + G + A VF +I + +L WN++I G+S+
Sbjct: 150 HCSVIRRGLDEDGHVSHSLITM-YARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRH 208
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
A+ LF +M+ + QP ++ S+ A +LG + G + VV+ + + F+ +
Sbjct: 209 AGEAVGLFREMM-EAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGS 267
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
+I+MY KCG++ +RR+FD M ++ V
Sbjct: 268 ALIHMYG--------------------------------KCGDLVSARRIFDSMKKKDKV 295
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
+WN+MI+GY +N +EA++LF++M+ + P + T++ +L+ACA +GA+ G+ + +
Sbjct: 296 TWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYA 355
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAI 307
F+ + V TA++DMY KCG + A +VF +P K WN+M+ LA +G EA+
Sbjct: 356 SERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEAL 415
Query: 308 KLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
LF + + + P+ I+F+ VL+AC H+G V++ + F +M+ ++ + P I+HYSCMV
Sbjct: 416 ALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMV 475
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D RAG LEEA + +MP PD +I G+LL AC+K NI+++++ K ++EL+ + S
Sbjct: 476 DLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSG 535
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YV+ S LYA +++++ R+LMK+ + K PGCS I+++ ++HEF AG LH + E
Sbjct: 536 NYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIE 595
Query: 486 VYLLLNDLGLLIQEM 500
++ +L+ LLI ++
Sbjct: 596 IHQILD---LLIDDL 607
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 211/409 (51%), Gaps = 39/409 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K LK+IHA L+ + K +I + D YA + F+ I P + +N +IR
Sbjct: 45 IKQLKQIHAQLLTNSIHKPNSFLYKI-----ADLKDFAYASVFFSNILDPTEYSFNVMIR 99
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G S + + L F + ++P LTYP LF A + L +G H V+++GL+
Sbjct: 100 GLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLD 159
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + +++I MYA +CG++ ++R++FD+
Sbjct: 160 EDGHVSHSLITMYA--------------------------------RCGKMGDARKVFDE 187
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ ++ VSWNSMISGY + EA+ LFREM E +P+E ++VS+L AC +LG ++ G
Sbjct: 188 ISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLG 247
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
W+ F+V N LN + +A+I MY KCG A ++F+++ KK WN+M+ G A N
Sbjct: 248 TWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQN 307
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EAIKLF ++ S+ PD I+ I +L+AC G ++ K +E + +
Sbjct: 308 GMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASER-GFQDDVYV 366
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ +VD + G L+ A ++ MP + + + W +++SA HG + A
Sbjct: 367 GTALVDMYAKCGSLDNAFRVFYGMP-NKNEVSWNAMISALAFHGQAQEA 414
>gi|147838430|emb|CAN76592.1| hypothetical protein VITISV_020294 [Vitis vinifera]
Length = 978
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/488 (34%), Positives = 268/488 (54%), Gaps = 36/488 (7%)
Query: 10 HLIKTGLA-KDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
HL K +P + ++L FC S +G + YA LVF +I P WN++IRGFSQS +
Sbjct: 419 HLWKQRFGPHNPSISEKLLNFCAVSVSGSLAYAQLVFHRIHNPQTPAWNSMIRGFSQSPS 478
Query: 68 PRN--AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
P AI+ + ML S +P T+ L KA + ++HG +++ G +DQ
Sbjct: 479 PLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEAKEEGKCREVHGFIIRFG--YDQ-- 534
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
DVV ++I A G I+ + ++F++M +R+
Sbjct: 535 ----------------------------DVVLCTNLIRSYAGNGLIETAHKVFEEMPARD 566
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSWNSMIS Y + +EAL+++ +M+ N+ FT+VSLL++CA +GA+ G +H
Sbjct: 567 LVSWNSMISCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHR 626
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
F N V A+IDMY KCG AL +FN++PK+ + WNSM+ G ++G +E
Sbjct: 627 FAGERRLVENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDE 686
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AI F + + ++P+ I+F+ +L C+H G V + YF +M+ + +KP IKHY CMV
Sbjct: 687 AITFFGSMLMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMV 746
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D GRAG L+EA ++IRS PS D ++W +LL +C+ H N+E+ + A + +++L +
Sbjct: 747 DLFGRAGKLKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAG 806
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
VL+S +YA + + R L++ I+ PG S IEV +VH FV + HP + E
Sbjct: 807 DCVLLSGIYAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSRE 866
Query: 486 VYLLLNDL 493
+Y L ++
Sbjct: 867 IYRKLEEV 874
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/501 (32%), Positives = 274/501 (54%), Gaps = 33/501 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K L ++HAH+I +G +++L + AG I+Y +F + P+ F++ ++IR
Sbjct: 25 LKLLHQVHAHVIVSGYGCSRFLLTKLLNLACA-AGSISYTRQIFLIVPNPDSFLFTSLIR 83
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S+ L F +V S + P T+ S+ K+ A L R G +HG V+ G
Sbjct: 84 STSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFG 143
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++ ++ Y KCG + +R++FDK
Sbjct: 144 SDVYVQTALMSFYG--------------------------------KCGVLCNARKVFDK 171
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ V+WNSMISGY +N KEA+ LF M+E ++P+ T VS+L+ACA LGA G
Sbjct: 172 MRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILG 231
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
W+H + V N +LN ++ T++I+MY +CG +A +VF+++ ++ + W +M+ G N
Sbjct: 232 CWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTN 291
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
GY ++A++LF ++ + L P+ I+F+AVL+AC H+G VN+ + F M E Y++ P ++H
Sbjct: 292 GYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEH 351
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ C+VD LGRAGLL+EA I+ + +P IW ++L AC+ H N + Q A+ + +
Sbjct: 352 HVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASE 411
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
YV++SN+YA + + ++ R M ++K+ G S I++D + + F G + H
Sbjct: 412 PGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSH 471
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
+ E+Y L+ L +E G
Sbjct: 472 TETNEIYHYLDQLMRKCREAG 492
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 279/504 (55%), Gaps = 47/504 (9%)
Query: 9 AHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNL----FIWNTIIRGFSQ 64
A L+K+GL + + +R+ F S + + + +P++ F+ NT+IR +
Sbjct: 43 AFLLKSGLHANSLVLTRL--FAASASAAPALLDPLVAALLRPSVPLDAFLANTLIR--AH 98
Query: 65 SSTPRNAILL----FIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD-GAQLHGRVVKQGL 119
+++P +++ L F +++ + P + T+P L KA A L + D G Q H +K G
Sbjct: 99 ATSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDVGLQAHAAALKFGF 158
Query: 120 EFDQFIHNTIIYMYA--NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
DQ++ NT+I+MY+ GFL +AR +
Sbjct: 159 ATDQYVSNTLIHMYSCFGGGFLGDAR--------------------------------NV 186
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD+M + V+W++MI GYVR +A+ELFREMQ ++ E T++ +L A LGA+
Sbjct: 187 FDRMPKESAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGAL 246
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
W+ F+ + + A+ID KCG + A+ VF + ++ + W S++ L
Sbjct: 247 ELARWVRRFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDAL 306
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
AM G EA+++F ++ + + PD ++FI VLTAC+H+G V++ YF M Y I+P
Sbjct: 307 AMEGRGKEAVRVFEEMKVAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPK 366
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+HY CMVD GRAG++E A + +R+MP P+ +IW SL+SACR HG +E+ + + ++
Sbjct: 367 IEHYGCMVDMFGRAGMVERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLL 426
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
Y+++SN++A + +++E E R M + I+K PGCS++E+DGEVHEF+AG
Sbjct: 427 HEYPAHEANYIMLSNVFALTQRWKEKSEIRREMSKRGIKKVPGCSIVELDGEVHEFIAGD 486
Query: 478 RLHPKAPEVYLLLNDLGLLIQEMG 501
HP+ ++Y ++ ++ ++ +G
Sbjct: 487 ESHPQYKDIYRMVEEMARELRRVG 510
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 268/498 (53%), Gaps = 37/498 (7%)
Query: 5 KKIHAHLIKTGLAKDP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+ IH+HL ++ LA D + S I +C G ++ A VF I ++ W +I G++
Sbjct: 82 RAIHSHLSRSRLAGDGFLLNSLIHMYCK--CGAVSDARHVFDGIPTRDVVSWTYLITGYA 139
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
Q+ P A+ L DML + +P T+ S KA G G Q+H VK L+ D
Sbjct: 140 QNDMPAEALGLLPDML-RARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDV 198
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
++ + ++ MYA +C ++D + R+FD + S
Sbjct: 199 YVGSALLDMYA--------------------------------RCQQMDMAIRVFDWLDS 226
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+N VSWN++I+G+ R + L F EMQ + FT S+ +A A++GA+ QG W+
Sbjct: 227 KNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWV 286
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++ + +L V I+ MY K G A +VF+ V ++ L WN+M+ A G
Sbjct: 287 HAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLG 346
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ F ++ ++ + I+F++VLTAC+H G V + K YF +M + Y ++P I HY
Sbjct: 347 KEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKD-YNVEPEIDHYVS 405
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
VD LGRAGLL+EA + MP +P A +WG+LL ACR H N ++ + AA + ELD +
Sbjct: 406 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPED 465
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
+ VL+ N+YA++ Q+++A R +MK ++KEP CS +E++ VH FVA HPK+
Sbjct: 466 TGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKS 525
Query: 484 PEVYLLLNDLGLLIQEMG 501
E+Y + ++ I++ G
Sbjct: 526 EEIYRMWEEVNTRIKKAG 543
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 171/391 (43%), Gaps = 49/391 (12%)
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN 135
+D+L+T + P Y S+ A AQ +H + + L D F+ N++I+MY
Sbjct: 50 LDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCK 109
Query: 136 CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
CG +S+AR +FD + T DVV+W +I+G
Sbjct: 110 CGAVSDARHVFDGIPTR-DVVSW-------------------------------TYLITG 137
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN 255
Y +N EAL L +M +PS FT S L A G GE +H V + +
Sbjct: 138 YAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDED 197
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
V +A++DMY +C + A++VF+ + K WN+++ G A G + F+ +Q
Sbjct: 198 VYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQR 257
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL----GRA 371
+ + ++ +V +A G + Q + + IK K + + + + ++
Sbjct: 258 NGFGATHFTYSSVFSALARIGALEQGR-----WVHAHMIKSGQKLTAFVANTILGMYAKS 312
Query: 372 GLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN--ESCGYVL 429
G + +A K+ + D + W ++L+A ++G + K+A E+ K +
Sbjct: 313 GSMVDARKVFDRV-DQRDLVTWNTMLTAFAQYG---LGKEAVAHFEEIRKYGIQLNQITF 368
Query: 430 MSNLYAASYQ--FEEAMEERLLMKEVKIEKE 458
+S L A S+ +E + +MK+ +E E
Sbjct: 369 LSVLTACSHGGLVKEGKQYFDMMKDYNVEPE 399
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 279/498 (56%), Gaps = 35/498 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H L+ +GL D + +++++ + G + +A +F + K N+F+WN +IR +++
Sbjct: 82 RQLHGRLLVSGLGPDTVLSTKLVDLYAA-CGQVGHARRLFDGMPKRNVFLWNVLIRAYAR 140
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
PR A + +V ++P TYP + KA A L G ++H RV D F
Sbjct: 141 EG-PREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVF 199
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA KCG +D++R +FD + R
Sbjct: 200 VCAGVVDMYA--------------------------------KCGCVDDARAVFDGIAVR 227
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V WNSMI+ Y +N + EAL L R+M I P+ T+VS ++A A A+ +G +H
Sbjct: 228 DAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELH 287
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
F F L + T+++DMY K G + A +F + K+ L WN+M+ G M+G+ +
Sbjct: 288 GFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHAD 347
Query: 305 EAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ LF+ ++ + + PD I+F+ VL+ACNH G V +AK++F LM Y IKP+++HY+C
Sbjct: 348 EALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTC 407
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
++D LG G EEA LI+ M +PD+ IWG+LL+ C+ H N+E+ + A +++IEL+ +
Sbjct: 408 VIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPED 467
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
+ YV +SN+YA S ++E+A R LM ++K CS IE+ G+ H F+ G HP++
Sbjct: 468 AGNYVHLSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRS 527
Query: 484 PEVYLLLNDLGLLIQEMG 501
E+Y L L L+ + G
Sbjct: 528 DEIYGELERLEGLMSDAG 545
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 187/456 (41%), Gaps = 78/456 (17%)
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GF+ S P + L +SP T S+ ++ G R G QLHGR++ GL
Sbjct: 41 GFAASPPPPSTN----PRLASSPHAYHHHT--SILQSCVASGSLRAGRQLHGRLLVSGLG 94
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + ++ +YA CG + AR +FD + +V WN +I
Sbjct: 95 PDTVLSTKLVDLYAACGQVGHARRLFDGMPKR-NVFLWNVLI------------------ 135
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
Y R + A+ L+R M E ++P FT +L ACA L + G
Sbjct: 136 -------------RAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETG 182
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H + + + V ++DMY KCGC + A VF+ + + WNSM+ N
Sbjct: 183 REVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQN 242
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF--------------- 345
G EA+ L + ++ + P + ++ ++A + + + ++
Sbjct: 243 GRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLK 302
Query: 346 TLMTETYK---------------IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD--- 387
T + + Y +K + ++ M+ G G +EA L M D
Sbjct: 303 TSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQV 362
Query: 388 -PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD--KNESCGYVLMSNLYAASYQFEEAM 444
PD I + +LSAC G +E AK+ ++ K Y + ++ + +FEEA
Sbjct: 363 TPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAY 422
Query: 445 EERLLMKEVKIEKEPGCSLIEVDG-EVHEFVAGGRL 479
+ L+K + IE + G ++G ++H+ V G L
Sbjct: 423 D---LIKGMSIEPDSGIWGALLNGCKIHKNVELGEL 455
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/475 (35%), Positives = 263/475 (55%), Gaps = 36/475 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH ++ GL D A+ ++ + +G A VF QI + N+ WN ++ F+Q
Sbjct: 230 KEIHGFSLRFGLESDIFVANALIDM-YAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQ 288
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ L M I P +T+ ++ A A++G R G ++H R ++ G D F
Sbjct: 289 NRLELAAVDLVRQMQADGEI-PNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLF 347
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N + MYA KCG ++ +RR+F K+ R
Sbjct: 348 VSNALTDMYA--------------------------------KCGCLNLARRVF-KISLR 374
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VS+N +I GY + E+L LF EM + +K + + +++ACA L A++QG+ +H
Sbjct: 375 DEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVH 434
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
V + + A++D Y KCG + A +VF +P + + WNSM+ G M G
Sbjct: 435 GLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELT 494
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
AI LF ++ ++ D +S+IAVL+AC+H G V + K YF M + IKP+ HY+CM
Sbjct: 495 IAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHM-QVQNIKPTQMHYACM 553
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAGL+EEA KLI S+P +PDA +WG+LL ACR HG IE+A AA+ + +L S
Sbjct: 554 VDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHS 613
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
Y ++SN+YA + +++EA + R LMK +K PGCS +++D +VH FVAG R+
Sbjct: 614 GYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGERM 668
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 172/380 (45%), Gaps = 38/380 (10%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IH + K G D + +L F G + VF ++ + ++ WN++I FS
Sbjct: 27 REIHGVVFKLGFDSDVFVGNTLLLF-YGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSV 85
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
AI LF +M + S +P ++ S+ A L G Q+H VVK GL+
Sbjct: 86 HGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVT 145
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ +Y KCG + +SRR+FD++ R
Sbjct: 146 VGNALVDVYG--------------------------------KCGYVKDSRRVFDEISER 173
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSWN++I+ + ++ALE+FR M + +KP+ T S+L +L G+ IH
Sbjct: 174 NGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIH 233
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
F + E + V A+IDMY K G +A VFN + +K + WN+MV A N E
Sbjct: 234 GFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLEL 293
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY--S 362
A+ L +Q+ P+ ++F VL AC G + K+ + + S+ + +
Sbjct: 294 AAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKE---IHARAIRTGSSVDLFVSN 350
Query: 363 CMVDALGRAGLLEEAEKLIR 382
+ D + G L A ++ +
Sbjct: 351 ALTDMYAKCGCLNLARRVFK 370
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 162/368 (44%), Gaps = 76/368 (20%)
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T+P + KA A + G ++HG V K G + D F+ NT++ Y NCG L + + +FDE+
Sbjct: 9 TFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEM 68
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
E DVV+WNS +IG+ + G+ + EA+ LF
Sbjct: 69 -LERDVVSWNS-VIGVFS-------------------------VHGF-----YAEAIHLF 96
Query: 210 REMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
EM +P+ ++VS+L CA L G IH ++V + V A++D+Y K
Sbjct: 97 CEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGK 156
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG + + +VF+ + ++ WN+++ LA +A+++F + +KP+ ++F ++
Sbjct: 157 CGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSM 216
Query: 329 LTAC-----------------------------------NHSGKVNQAKDYFTLMTETYK 353
L SG+ QA + F + E
Sbjct: 217 LPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGE--- 273
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIEMAK 410
+I ++ MV + L A L+R M +D P+++ + ++L AC + G + K
Sbjct: 274 --KNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGK 331
Query: 411 QAAKQIIE 418
+ + I
Sbjct: 332 EIHARAIR 339
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
++ + T +L ACA ++++G IH + F+ + V ++ Y CG +
Sbjct: 3 VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVK 62
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYISFIAVLTACNHS 335
+VF+ + ++ + WNS++ +++G+ EAI LF + S +P+ +S ++VL C
Sbjct: 63 RVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGL 122
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
+ + +T + + + +VD G+ G ++++ ++ + S+ + + W +
Sbjct: 123 EDGVTGRQIHCYVVKT-GLDSQVTVGNALVDVYGKCGYVKDSRRVFDEI-SERNGVSWNA 180
Query: 396 LLSA 399
++++
Sbjct: 181 IITS 184
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 259/450 (57%), Gaps = 3/450 (0%)
Query: 52 LFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLH 111
L +N +I G+ + A L + +V+S I+ TYPS+ +A A L + G Q+H
Sbjct: 251 LVAYNAMISGYVNCGLYQEA-LEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVH 309
Query: 112 GRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
V+++ +F N+++ +Y CG +EAR +F+++ + D+V+WN+++ G G I
Sbjct: 310 AYVLRRE-DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSGYVSSGHI 367
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
E++ +F +M +N +SW MISG N +E L+LF M+ + +P ++ + +C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A LGA G+ H LV F+ + A+I MY KCG E A QVF T+P WN
Sbjct: 428 AVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWN 487
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+++ L +G+ EA+ ++ + ++PD I+F+ VLTAC+H+G V+Q + YF M
Sbjct: 488 ALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETV 547
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
Y+I P HY+ ++D L R+G EAE +I S+P P A IW +LLS CR HGN+E+
Sbjct: 548 YRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGII 607
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
AA ++ L Y+L+SN+YAA+ Q+EE R LM++ ++KE CS IE++ +VH
Sbjct: 608 AADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVH 667
Query: 472 EFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
F+ HP+A VY L DLG ++ +G
Sbjct: 668 TFLVDDTSHPEAEAVYKYLQDLGKEMRRLG 697
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 161/359 (44%), Gaps = 50/359 (13%)
Query: 101 LGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNS 160
L LAR +HG ++ G + I N +I +Y L AR +FDE+ +E D +A +
Sbjct: 30 LQLAR---AVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEI-SEPDKIARTT 85
Query: 161 MIIGLAKCGEIDESRRLFDK--MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
M+ G G+I +R +F++ + R+TV +N+MI+G+ N A+ LF +M+ + K
Sbjct: 86 MVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 219 PSEFTMVSLLNACA-KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP----E 273
P +FT S+L A + +Q H + + T V A++ +Y +C
Sbjct: 146 PDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLH 205
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMN---------------------------GYEN-- 304
A +VF+ +P+K W +M+ G N GY N
Sbjct: 206 SARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCG 265
Query: 305 ---EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY--FTLMTETYKIKPSIK 359
EA+++ + SS ++ D ++ +V+ AC ++ + K + L E + S
Sbjct: 266 LYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDF----SFH 321
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ +V + G EA + MP+ D + W +LLS G+I AK K++ E
Sbjct: 322 FDNSLVTLYYKCGKFNEARAIFEKMPA-KDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 118/300 (39%), Gaps = 66/300 (22%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM---------------- 78
G N A +F ++ +L WN ++ G+ S A L+F +M
Sbjct: 334 GKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393
Query: 79 --------------LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ +P + K+ A LG +G Q H ++VK G +
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLS 453
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
N +I MYA CG + EA+ +F + D V+WN++I L + G
Sbjct: 454 AGNALITMYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAALGQHGH-------------- 498
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
EA++++ EM ++ I+P T +++L AC+ G + QG
Sbjct: 499 -----------------GVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYF 541
Query: 245 NFLVTNCFEL--NTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
N + T + + +ID+ C+ G A + ++P K W +++ G ++G
Sbjct: 542 NSMET-VYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHG 600
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++ HA L+K G ++A L + G + A VF + + WN +I Q
Sbjct: 437 QQFHAQLVKIGF-DSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQ 495
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG 107
A+ ++ +ML I+P R+T+ ++ A + GL G
Sbjct: 496 HGHGVEAVDVYEEML-KKGIRPDRITFLTVLTACSHAGLVDQG 537
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 177/495 (35%), Positives = 269/495 (54%), Gaps = 38/495 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ ++K+IH +KT L D + + S GD A VF + ++ W +I
Sbjct: 200 IAEVKQIHTLAVKTDLWCDMFVQNSFV-HVYSICGDTVGASKVFDFMPVRDVVSWTGLIS 258
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ ++ +A+ LF+ M + P T+ S+ A +LG G +HG V K
Sbjct: 259 GYMKAGLFNDAVALFLRM----DVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHG 314
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ + NT++ MY KC + +++RLFD+
Sbjct: 315 KELVVSNTLMDMYV--------------------------------KCESVTDAKRLFDE 342
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ ++ VSW SMISG V+ +E+L+LF EM +P + S+L+ACA LG + G
Sbjct: 343 IPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYG 402
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
W+H ++ + + + + T++IDMY KCGC E A Q+FN +P K + WN+ + GLA+N
Sbjct: 403 RWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAIN 462
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE-TYKIKPSIK 359
G+ EA+K F L S +P+ I+F+AV +AC HSG V++ + YF MT Y + P ++
Sbjct: 463 GHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLE 522
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD L RA L+EEA +LI MP PD I G+LLSA +GN+E+ + K +
Sbjct: 523 HYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGALLSASSTYGNVELTPEMLKTVRNF 582
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ ES YVL+SN YA + ++ E R LMKE I K PG SLI VDG+ H+FV G
Sbjct: 583 ECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSSLIRVDGKSHKFVVGDNN 642
Query: 480 HPKAPEVYLLLNDLG 494
HP++ ++++LLN L
Sbjct: 643 HPQSEDIHVLLNILA 657
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 190 NSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
N +ISGY A+ ++R + P +T+ ++L +CA+ I + + IH V
Sbjct: 153 NLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVK 212
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
+ V + + +Y CG A +VF+ +P + + W ++ G G N+A+ L
Sbjct: 213 TDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVAL 272
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
F + ++ P+ +F+++L AC G +N K L+++ Y + + ++D
Sbjct: 273 FLRM---DVAPNAATFVSILGACGKLGCLNLGKGIHGLVSK-YPHGKELVVSNTLMDMYV 328
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN--ESCGY 427
+ + +A++L +P + D + W S++S ++ + +++ E+ + E G
Sbjct: 329 KCESVTDAKRLFDEIP-EKDIVSWTSMISGLVQY---QCPQESLDLFYEMLGSGFEPDGV 384
Query: 428 VLMSNLYAAS----YQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
+L S L A + + + E + +K + G SLI++
Sbjct: 385 ILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDM 427
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 286/512 (55%), Gaps = 22/512 (4%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYA-YLVFTQIKKPNLFIWNTII 59
M++ K++HA ++ G+ R+LA AGD YA L+ + P+ + N ++
Sbjct: 1 MEEAKQLHALALRRGVRLLQPLLLRVLA-----AGDHRYAARLLESYPAPPSAPLHNRLL 55
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQL------HGR 113
+ P +L F S + RL P F + + H
Sbjct: 56 HALASLHRPHPLLLPFF-----SRLHRLRLLTPLSFTLLFSSSSSSASSSTPFFLCSHSL 110
Query: 114 VVKQG--LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
++K G D F+ + ++ YA L EAR +FDE+ D +N+++ AK G +
Sbjct: 111 LIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCR-DTAVYNALLSAYAKGGLV 169
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNA 230
D + +LF++M RN VSW +M+SGY +N + +EA+E F EM E+ ++P+E T+ S+L A
Sbjct: 170 DSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPA 229
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK-GLSC 289
CA +GA+ G + + N V A+++MY KCG +A QVF + ++ L
Sbjct: 230 CAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCS 289
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WNSM+ A++G EA+ LF L+ + +KPD I+F+ V+ AC H G VN+ K +F M
Sbjct: 290 WNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSME 349
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ +KP I+HY CMVD LGRAGLL E+ LI SMP +PDA+IWG+LL AC HGN+E+A
Sbjct: 350 AEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVELA 409
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGE 469
+ A ++I L+ + V++SN+YA+S +++ + L+KE +K G S IE+DG
Sbjct: 410 ELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLKEKDHKKSAGYSFIELDGT 469
Query: 470 VHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+H+F+ + HP+ EVY LN + + ++ +G
Sbjct: 470 MHKFLVEDKSHPRFEEVYNTLNSVTMTMKLVG 501
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 268/499 (53%), Gaps = 37/499 (7%)
Query: 3 DLKKIHAH-LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
DL+ + H L L + I + + G + A LVF ++ + WN II
Sbjct: 329 DLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAA 388
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
Q+ + LF+ ML S ++P TY S+ KA A G ++H R++K +
Sbjct: 389 HEQNGNEEKTLSLFVWML-QSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGL 447
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+ +I MY+ KCG ++++ +L D++
Sbjct: 448 DSFVGIALIDMYS--------------------------------KCGMMEKAEKLHDRL 475
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+ VSWN++ISG+ + +EA + F +M E + P FT ++L+ CA L + G+
Sbjct: 476 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 535
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH ++ + + + + ++DMY KCG + +F P + WN+MV G A +G
Sbjct: 536 QIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHG 595
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
EA+K+F +Q N+KP++ +F+AVL AC H G V + YF M Y + P ++HY
Sbjct: 596 LGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY 655
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
SC+VD +GR+G + +A +LI MP + DA+IW +LLS C+ HGN+E+A++AA I++L+
Sbjct: 656 SCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEP 715
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
+S YVL+SN+YA + + E + R +M+ ++KEPGCS IE+ EVH F+ G + HP
Sbjct: 716 EDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHP 775
Query: 482 KAPEVYLLLNDLGLLIQEM 500
++ E+Y +L +L EM
Sbjct: 776 RSKEIY---ENLDVLTDEM 791
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 199/484 (41%), Gaps = 72/484 (14%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+ HA +I T K + + L D+ +A+ VF + + + WN ++ G++
Sbjct: 62 KQAHARMILTEF-KPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAG 120
Query: 65 SSTPRNAILLFIDMLVTS--------------PIQPQRLTYPSLFKAYAQLGLARDGAQL 110
A LF M T R T+ + K+ + L G Q+
Sbjct: 121 RGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQI 180
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGF----LSEARLMFDEVD---------------T 151
HG VK G + D + ++ MYA C L +F E+ T
Sbjct: 181 HGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKT 240
Query: 152 EF--DVVAWNSMIIGLAKCGEI-DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
+F DVV + + KC + D S +LF+ + + N S+N++I GY R+ K EAL +
Sbjct: 241 DFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGM 300
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
FR +Q+ + E ++ ACA + +G +H + + + N V AI+DMY K
Sbjct: 301 FRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGK 360
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG A VF + + WN+++ NG E + + LF + S ++PD ++ +V
Sbjct: 361 CGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSV 420
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL-------- 380
L AC +N + + ++ S + ++D + G++E+AEKL
Sbjct: 421 LKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIA-LIDMYSKCGMMEKAEKLHDRLAEQT 479
Query: 381 --------------------------IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+ M DPD + ++L C +E+ KQ
Sbjct: 480 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 539
Query: 415 QIIE 418
QII+
Sbjct: 540 QIIK 543
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 148/395 (37%), Gaps = 92/395 (23%)
Query: 81 TSPIQP---------QRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIY 131
T PI P ++ T+ +F+ + G Q H R++ + F+ N +I
Sbjct: 26 TLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQ 85
Query: 132 MYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNS 191
MY C L A +FD + + D V+WN+M+ G A G+I +++LFD M
Sbjct: 86 MYIKCSDLGFAFKVFDGM-PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGC----- 139
Query: 192 MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
G V F+ M T +L +C+ L G IH V
Sbjct: 140 ---GVVELFDFR--------MGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG 188
Query: 252 FELNTIVVTAIIDMYCKCGCPER-----ALQVFNTVPKKG-------------------- 286
F+ + + +A++DMY KC C + L++F + K G
Sbjct: 189 FDCDVVTGSALLDMYAKC-CVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVV 247
Query: 287 ------------------------------LSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
L +N+++ G A + EA+ +F LQ S
Sbjct: 248 IGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKS 307
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL----GRAG 372
L D +S AC D L +K + C+ +A+ G+ G
Sbjct: 308 GLGLDEVSLSGAXRAC-----AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCG 362
Query: 373 LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
L EA + M S DA+ W ++++A ++GN E
Sbjct: 363 ALVEACLVFEEMVS-RDAVSWNAIIAAHEQNGNEE 396
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 274/492 (55%), Gaps = 34/492 (6%)
Query: 24 SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSP 83
++I+A C +GDI+ A VF ++ N WN+++ G S+ + ++ L
Sbjct: 65 NKIIARCVR-SGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSR----MMEAHQLFDEI 119
Query: 84 IQPQRLTYPSLFKAYAQ--------------------------LGLARDGAQLHGR-VVK 116
+P +Y + Y + G AR G R +
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
+E ++ N +I Y CG L +A F +V VVAW +MI G K +++ +
Sbjct: 180 SMMEKNEVSWNAMISGYIECGDLEKASHFF-KVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 177 LFDKM-VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+F M V++N V+WN+MISGYV N + ++ L+LFR M E+ I+P+ + S L C++L
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A++ G IH + + + +T++I MYCKCG A ++F + KK + WN+M+
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
G A +G ++A+ LF + + ++PD+I+F+AVL ACNH+G VN YF M YK++
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P HY+CMVD LGRAG LEEA KLIRSMP P A ++G+LL ACR H N+E+A+ AA++
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 478
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+++L+ + GYV ++N+YA+ ++E+ R MKE + K PG S IE+ +VH F +
Sbjct: 479 LLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRS 538
Query: 476 GGRLHPKAPEVY 487
R+HP+ ++
Sbjct: 539 SDRIHPELDSIH 550
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 228/356 (64%), Gaps = 4/356 (1%)
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+FD + VV +N+M+ GL + G +D + +FD M + VSW ++I G+V+N + E
Sbjct: 129 LFDTMPVR-SVVTYNTMVSGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDE 187
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
A++ FR M +++P T++++++ACA++GA+ G W+H ++ E N V ++ID
Sbjct: 188 AIDCFRAMLLDSVEPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLID 247
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
MY +CG + A QVF+++ K+ + WNSM+ GLA NG EAI+LF ++ KPD ++
Sbjct: 248 MYARCGQVKLAAQVFHSIRKRTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVT 307
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
VLTAC+H+G Y+ LMT Y I ++HY C+VD LGRAG L+EA ++ +M
Sbjct: 308 LTGVLTACSHAGLTEHGLRYYDLMTTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVVETM 367
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
P P+ ++ G+LL+ CR HG+++MA+Q + + ELD YVL+SN+YAA +++ A
Sbjct: 368 PMRPNEVVLGALLAGCRMHGDLDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAG 427
Query: 445 EERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEM 500
+ R LMK ++K PG S++E+DG+VHEFV+ R HP+A E+ + LGLL EM
Sbjct: 428 KVRSLMKARGVKKRPGHSIVEIDGDVHEFVSSDRSHPQAEEIGQM---LGLLRHEM 480
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 38/268 (14%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A+ VF + P+ W +I GF ++ AI F ML+ S ++P +T ++
Sbjct: 152 GLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDS-VEPDYVTLIAV 210
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A A++G G +H V++QGLE + + N++I MYA CG + A +F + +
Sbjct: 211 VSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQVFHSI-RKRT 269
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
VV+WNSMI+GLA G EA+ELF EM+
Sbjct: 270 VVSWNSMIVGLAANGLC-------------------------------TEAIELFEEMRR 298
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN-CFELNTIVVTAIIDMYCKCGCPE 273
Q KP T+ +L AC+ G G ++ + T ++D+ + G +
Sbjct: 299 QGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGIAARMEHYGCVVDLLGRAGRLD 358
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNG 301
A+ V T+P + N +V G + G
Sbjct: 359 EAMHVVETMPMRP----NEVVLGALLAG 382
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 14/252 (5%)
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS--EFTMVSLLNA 230
ES+R + R+ VSW S I+ R A M P+ + T++++L+A
Sbjct: 20 ESQR-APRHAPRDVVSWTSTIARAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSA 78
Query: 231 CAKLGAIRQGEWIHNFLVTNCFEL---NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
CA + + L +L + ++ T + Y P ALQ+F+T+P + +
Sbjct: 79 CADSPSSPLARPLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDTMPVRSV 138
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
+N+MV GL NG + A ++F G+ PD +S+ A++ +G+ ++A D F
Sbjct: 139 VTYNTMVSGLMRNGLVDAAFEVFDGMPG----PDKVSWTALIDGFVKNGRHDEAIDCFRA 194
Query: 348 MTETYKIKPSIKHYSCMVDA---LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
M ++P +V A +G GL +L+ + + + SL+ + G
Sbjct: 195 MLLD-SVEPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCG 253
Query: 405 NIEMAKQAAKQI 416
+++A Q I
Sbjct: 254 QVKLAAQVFHSI 265
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 274/498 (55%), Gaps = 35/498 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K IH +K + D ++ L + G A F ++ ++ WN++I G++Q
Sbjct: 450 KSIHCFTVKADMDSD-LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
P NAI +F + + S I P T + A A L G +HG +VK G E D
Sbjct: 509 IGDPYNAIDMFYKLRL-SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCH 567
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM-VS 183
+ N +I MYA KCG + + LF+K +
Sbjct: 568 VKNALIDMYA--------------------------------KCGSLPSAEFLFNKTDFT 595
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
++ V+WN +I+ Y++N KEA+ F +M+ +N P+ T VS+L A A L A R+G
Sbjct: 596 KDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 655
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++ F NT+V ++IDMY KCG + + ++FN + K WN+M+ G A++G+
Sbjct: 656 HACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 715
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+ AI LFS +Q S ++ D +SF++VL+AC H+G V + + F M++ Y IKP ++HY+C
Sbjct: 716 DRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAGL +E I+ MP +PDA +WG+LL +CR H N+++ + A +++L+
Sbjct: 776 MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
+V++S++YA S ++ +A + R M ++ ++K PGCS +E+ +VH F G + HP+
Sbjct: 836 PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQL 895
Query: 484 PEVYLLLNDLGLLIQEMG 501
++LL N L ++++G
Sbjct: 896 ESMHLLWNTLLEKMEKIG 913
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 225/507 (44%), Gaps = 75/507 (14%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H + + GL +D + ++ S GD+ A VF ++ K ++ WN +I G SQS
Sbjct: 152 HGEIDRRGLERDVFIGAGLVDM-YSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE------- 120
P A+ F M + ++P ++ +LF +L +HG V ++
Sbjct: 211 PCEAVDFFRSMQLVG-VEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGL 269
Query: 121 ----------------FDQFIHN------TIIYMYANCGFLSEARLMFDE---------- 148
FDQ + T++ YA+ G E +FD+
Sbjct: 270 IDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINK 329
Query: 149 -------------VDTE---------------FDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+D E D++ +++ AKCGE +++++LF
Sbjct: 330 VSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWG 389
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ R+ V+W+++I+ V+ +EAL LF+EMQ Q +KP+ T++S+L ACA L ++ G
Sbjct: 390 LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG 449
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ IH F V + + TA++ MY KCG AL FN + + + WNS++ G A
Sbjct: 450 KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQI 509
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-YKIKPSIK 359
G AI +F L+ S + PD + + V+ AC ++Q L+ + ++ +K
Sbjct: 510 GDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVK 569
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
+ ++D + G L AE L D + W +++A ++G+ + A + Q + L
Sbjct: 570 --NALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQ-MRL 626
Query: 420 DKNESCGYVLMSNLYAASY--QFEEAM 444
+ +S L AA+Y F E M
Sbjct: 627 ENFHPNSVTFVSVLPAAAYLAAFREGM 653
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 186/406 (45%), Gaps = 37/406 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH ++ + D + A+ ++ + G+ A +F ++ +L W+ II Q
Sbjct: 349 KEIHGCALQQRIDSDILVATPLMVM-YAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P A+ LF +M ++P R+T S+ A A L L + G +H VK ++ D
Sbjct: 408 TGYPEEALSLFQEMQ-NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLS 466
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
++ MYA KCG + F++M SR
Sbjct: 467 TGTALVSMYA--------------------------------KCGFFTAALTTFNRMSSR 494
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V+WNS+I+GY + A+++F +++ I P TMV ++ ACA L + QG IH
Sbjct: 495 DIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIH 554
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN-TVPKKGLSCWNSMVFGLAMNGYE 303
+V FE + V A+IDMY KCG A +FN T K WN ++ NG+
Sbjct: 555 GLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHA 614
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EAI F ++ N P+ ++F++VL A + + + + + + ++ S
Sbjct: 615 KEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS- 673
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
++D + G L+ +EKL M D + W ++LS HG+ + A
Sbjct: 674 LIDMYAKCGQLDYSEKLFNEM-DHKDTVSWNAMLSGYAVHGHGDRA 718
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 202/472 (42%), Gaps = 78/472 (16%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +IHA +I +G I + D+ A VF P+ +WN++IR ++
Sbjct: 48 LLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDL--ARSVFDSTPNPSRILWNSMIRAYT 105
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+S A+ ++ M V ++P + T+ + KA ++G HG + ++GLE D
Sbjct: 106 RSKQYNEALEMYYCM-VEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDV 164
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK----CGEIDESR---- 175
FI ++ MY+ G L AR +FD++ DVVAWN+MI GL++ C +D R
Sbjct: 165 FIGAGLVDMYSKMGDLKRAREVFDKMPKR-DVVAWNAMIAGLSQSEDPCEAVDFFRSMQL 223
Query: 176 -----------RLFDKMVSRNTVSWNSMISGYVRNVKFKEAL------------------ 206
LF + + + I GYV F A+
Sbjct: 224 VGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVAR 283
Query: 207 -------------------------------ELFREMQEQNIKPSEFTMVSLLNACAKLG 235
ELF +M+ N++ ++ + VS A A+
Sbjct: 284 RVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETI 343
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+ +G+ IH + + + +V T ++ MY KCG E+A Q+F + + L W++++
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG--KVNQAKDYFTLMTETYK 353
L GY EA+ LF +Q+ +KP+ ++ +++L AC K+ ++ FT+ +
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD--- 460
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+ + + +V + G A M S D + W SL++ + G+
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRM-SSRDIVTWNSLINGYAQIGD 511
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 147/300 (49%), Gaps = 16/300 (5%)
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
D +R +FD + + + WNSMI Y R+ ++ EALE++ M E+ ++P ++T +L AC
Sbjct: 80 DLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKAC 139
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
+++G W H + E + + ++DMY K G +RA +VF+ +PK+ + WN
Sbjct: 140 TGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWN 199
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+M+ GL+ + EA+ F +Q ++P +S + + + + ++
Sbjct: 200 AMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCR---SIHGYV 256
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
++ S + ++D + G ++ A ++ M D D + WG++++ +G
Sbjct: 257 FRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAGYAHNGCF----- 310
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE-VDGEV 470
+++EL G V ++ + A S F A E L K +I GC+L + +D ++
Sbjct: 311 --VEVLELFDKMKLGNVRINKVSAVS-AFLAAAETIDLEKGKEIH---GCALQQRIDSDI 364
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 263/463 (56%), Gaps = 32/463 (6%)
Query: 39 YAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY 98
YA +F + N W+ +I G+ S + A+ LF M++ + P +T S+ +A
Sbjct: 263 YARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC 322
Query: 99 AQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAW 158
A+L G +LH ++K G D + NT++ MYA
Sbjct: 323 AKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYA------------------------ 358
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
KCG ID++ R FD M +++VS+++++SG V+N AL +FR MQ I
Sbjct: 359 --------KCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGID 410
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
P TM+ +L AC+ L A++ G H +L+ F +T++ A+IDMY KCG A +V
Sbjct: 411 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 470
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
FN + + + WN+M+ G ++G EA+ LF L + LKPD I+FI +L++C+HSG V
Sbjct: 471 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 530
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
+ + +F M+ + I P ++H CMVD LGRAGL++EA IR+MP +PD IW +LLS
Sbjct: 531 MEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 590
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
ACR H NIE+ ++ +K+I L + +VL+SN+Y+A+ ++++A R+ K+ ++K
Sbjct: 591 ACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 650
Query: 459 PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
PGCS IE++G VH FV G + H + ++ L +L + ++ +G
Sbjct: 651 PGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLG 693
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 194/410 (47%), Gaps = 37/410 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ + KKIH H +K D ++ S + A +F +I P++ +WN IIR
Sbjct: 24 LTEAKKIHQHFLKNTSNADSSVLHKLTRLYLS-CNQVVLARRLFDEIPNPSVILWNQIIR 82
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++ + AI L+ ML ++P + TYP + KA + L DG ++H GLE
Sbjct: 83 AYAWNGPFDGAIDLYHSMLHLG-VRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLE 141
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ ++ YA CG L EA+ +F + + DVVAWN+MI G + G D
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSM-SHRDVVAWNAMIAGCSLYGLCD-------- 192
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+A++L +MQE+ I P+ T+V +L + A+ G
Sbjct: 193 -----------------------DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHG 229
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H + V F+ +V T ++DMY KC C A ++F+ + + W++M+ G +
Sbjct: 230 KALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXS 289
Query: 301 GYENEAIKLFSGLQSSN-LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
EA++LF + + + P ++ +VL AC +++ + + + + I
Sbjct: 290 DCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVL-DIL 348
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ ++ + G++++A + M + D++ + +++S C ++GN +A
Sbjct: 349 LGNTLLSMYAKCGVIDDAIRFFDXM-NPKDSVSFSAIVSGCVQNGNAAVA 397
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 188/443 (42%), Gaps = 78/443 (17%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++D +IH+H GL D + ++ F + G + A +F+ + ++ WN +I
Sbjct: 125 IEDGVEIHSHAKMFGLESDVFVCTALVDF-YAKCGILVEAQRLFSSMSHRDVVAWNAMIA 183
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G S +A+ L + M I P T + + G LHG V++ +
Sbjct: 184 GCSLYGLCDDAVQLIMQM-QEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFD 242
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ ++ MYA C L AR ++FD
Sbjct: 243 NGVVVGTGLLDMYAKCQCLLYAR--------------------------------KIFDV 270
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-IKPSEFTMVSLLNACAKLGAIRQ 239
M RN VSW++MI GYV + KEALELF +M ++ + P+ T+ S+L ACAKL + +
Sbjct: 271 MGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSR 330
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G +H +++ L+ ++ ++ MY KCG + A++ F+ + K ++++V G
Sbjct: 331 GRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQ 390
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH------------------------- 334
NG A+ +F +Q S + PD + + VL AC+H
Sbjct: 391 NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI 450
Query: 335 ----------SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
GK++ A++ F M + I ++ M+ G GL EA L +
Sbjct: 451 CNALIDMYSKCGKISFAREVFNRMD-----RHDIVSWNAMIIGYGIHGLGMEALGLFHDL 505
Query: 385 PS---DPDAIIWGSLLSACRKHG 404
+ PD I + LLS+C G
Sbjct: 506 LALGLKPDDITFICLLSSCSHSG 528
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 145/365 (39%), Gaps = 68/365 (18%)
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
Y L +A Q + ++H +K D + + + +Y +C + AR +FDE+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
V+ W N +I Y N F A++L+
Sbjct: 70 PNP-SVILW-------------------------------NQIIRAYAWNGPFDGAIDLY 97
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
M ++P+++T +L AC+ L AI G IH+ E + V TA++D Y KC
Sbjct: 98 HSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKC 157
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G A ++F+++ + + WN+M+ G ++ G ++A++L +Q + P+ + + VL
Sbjct: 158 GILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Query: 330 TACNHSGKVNQAKD-------------------------------YFTLMTETYKIKPSI 358
+ + K Y + + ++ +
Sbjct: 218 PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSM----PSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+S M+ + ++EA +L M DP + GS+L AC K ++ ++
Sbjct: 278 S-WSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHC 336
Query: 415 QIIEL 419
II+L
Sbjct: 337 YIIKL 341
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 34/237 (14%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+H ++IK G D + + +L+ + G I+ A F + + ++ I+ G Q
Sbjct: 332 RKLHCYIIKLGXVLDILLGNTLLSM-YAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQ 390
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ +F M+ S I P T + A + L + G HG ++ +G D
Sbjct: 391 NGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTL 449
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I N +I MY+ CG +S AR +F+ +D D+V+WN+MIIG
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRH-DIVSWNAMIIGYG------------------ 490
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
I G EAL LF ++ +KP + T + LL++C+ G + +G
Sbjct: 491 --------IHGL-----GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGR 534
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 280/497 (56%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H+ LIK + D ++ S ++ A LVF + + ++ WN +I G SQ
Sbjct: 232 RQLHSSLIKMDMGSDSFLGVGLIDM-YSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQ 290
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A LF ++ T I + T ++ K+ A L Q+H +K G EFD +
Sbjct: 291 NEEDEEAASLF-PLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNY 349
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I Y KCG ++++ R+F++
Sbjct: 350 VVNSLIDTYG--------------------------------KCGHVEDATRVFEESPIV 377
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V + S+++ Y ++ + +EAL L+ EMQ++ IKP F SLLNACA L A QG+ +H
Sbjct: 378 DLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVH 437
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ F + ++++MY KCG E A F+ +P +G+ W++M+ GLA +GY
Sbjct: 438 VHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGK 497
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA++LF + + P++I+ ++VL ACNH+G V +AK YF M + I+P +HY+CM
Sbjct: 498 EALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACM 557
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
+D LGRAG LE A +L+ MP +A++WG+LL A R H NI++ +QAA+ ++ L+ +S
Sbjct: 558 IDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKS 617
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
+VL++N+YA+ +++ R LMK+ K++KEPG S +EV +V+ F+ G R H ++
Sbjct: 618 GTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRST 677
Query: 485 EVYLLLNDLGLLIQEMG 501
E+Y L++L L+++ G
Sbjct: 678 EIYAKLDELSDLLKKAG 694
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 190/415 (45%), Gaps = 36/415 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+KIH +LIK G D +A+ ++ + G + A VF +I KP++ WN II G
Sbjct: 131 RKIHGYLIKLGYDSDAFSANALVDM-YAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVL 189
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ L +M S + P T S KA A + L G QLH ++K + D F
Sbjct: 190 HEYHHRALELLREM-NKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSF 248
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ +I MY+ KC +D++R +F M R
Sbjct: 249 LGVGLIDMYS--------------------------------KCNSMDDARLVFKLMPER 276
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ ++WN++ISG+ +N + +EA LF M + I ++ T+ ++L + A L A IH
Sbjct: 277 DMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIH 336
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + FE + VV ++ID Y KCG E A +VF P L + S+V A +G
Sbjct: 337 ALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGE 396
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA++L+ +Q +KPD ++L AC Q K + + + I + +
Sbjct: 397 EALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILK-FGFMSDIFAGNSL 455
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
V+ + G +E+A +P + W +++ +HG + A Q KQ++++
Sbjct: 456 VNMYAKCGSIEDASCAFSRIPV-RGIVSWSAMIGGLAQHGYGKEALQLFKQMLKV 509
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 198/474 (41%), Gaps = 82/474 (17%)
Query: 2 KDL---KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTI 58
KDL K++H ++ TG D A+ L + G A +F I ++ WN +
Sbjct: 24 KDLVLGKQVHGIVVVTGFDSDEFVANS-LVILYAKCGGFGDARSLFDAIPDRSVVSWNAL 82
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
+ S A+ LF DM V S I+P + S+ L + G ++HG ++K G
Sbjct: 83 FSCYVHSDMHGEAVSLFHDM-VLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLG 141
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ D F N ++ MYA G L +A +FDE+ + D+V+W
Sbjct: 142 YDSDAFSANALVDMYAKVGILEDASSVFDEI-AKPDIVSW-------------------- 180
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
N++I+G V + ALEL REM + + P+ FT+ S L ACA +
Sbjct: 181 -----------NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRE 229
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G +H+ L+ ++ + +IDMY KC + A VF +P++ + WN+++ G +
Sbjct: 230 LGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHS 289
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA--------------------------- 331
N + EA LF + + + + + VL +
Sbjct: 290 QNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNY 349
Query: 332 -----CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+ GK +D + E+ + + ++ +V A + G EEA +L M
Sbjct: 350 VVNSLIDTYGKCGHVEDATRVFEESPIVDLVL--FTSLVTAYAQDGQGEEALRLYLEMQD 407
Query: 387 ---DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
PD+ + SLL+AC E KQ I++ + MS+++A +
Sbjct: 408 RGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILK--------FGFMSDIFAGN 453
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 157/344 (45%), Gaps = 38/344 (11%)
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR 143
I+ +PS+ KA G Q+HG VV G + D+F+ N+++ +YA
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYA--------- 56
Query: 144 LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
KCG ++R LFD + R+ VSWN++ S YV +
Sbjct: 57 -----------------------KCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHG 93
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
EA+ LF +M I+P+EF++ S++N C L QG IH +L+ ++ + A++
Sbjct: 94 EAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALV 153
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY K G E A VF+ + K + WN+++ G ++ Y + A++L + S + P+
Sbjct: 154 DMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMF 213
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+ + L AC + + + + S ++D + +++A + +
Sbjct: 214 TLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVG-LIDMYSKCNSMDDARLVFKL 272
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGY 427
MP + D I W +++S H E ++AA + L E G+
Sbjct: 273 MP-ERDMIAWNAVISG---HSQNEEDEEAA-SLFPLMHTEGIGF 311
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/468 (34%), Positives = 266/468 (56%), Gaps = 22/468 (4%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A +F ++ ++ WNT+I G++Q A LF + SPI+ T+ ++ Y
Sbjct: 220 ARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNE----SPIRDV-FTWTAMVSGYV 274
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQF-IHNTIIYMYANCGFLSEARL-----MFDEVDTEF 153
Q G+ + + FD+ + N I Y G++ ++ +F+ +
Sbjct: 275 QNGMVDEARKY----------FDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCR- 323
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
++ +WN+MI G + G I ++R+LFD M R+ VSW ++ISGY +N ++EAL +F EM+
Sbjct: 324 NISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMK 383
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ T L+ CA + A+ G+ +H +V FE V A++ MY KCG +
Sbjct: 384 RDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTD 443
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A VF + +K + WN+M+ G A +G+ +A+ LF ++ + +KPD I+ + VL+AC+
Sbjct: 444 EANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACS 503
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
HSG +++ +YF M Y +KP+ KHY+CM+D LGRAG LEEAE L+R+MP DP A W
Sbjct: 504 HSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASW 563
Query: 394 GSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEV 453
G+LL A R HGN E+ ++AA+ + +++ S YVL+SNLYAAS ++ + + R M+E
Sbjct: 564 GALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREA 623
Query: 454 KIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++K G S +EV ++H F G HP+ +Y L +L L ++ G
Sbjct: 624 GVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREG 671
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 184/391 (47%), Gaps = 57/391 (14%)
Query: 45 TQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAY---A 99
+ K P++ WN I ++ +A+ +F M P+R ++Y ++ Y A
Sbjct: 39 VKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSM-------PRRSSVSYNAMISGYLRNA 91
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
+ LARD + + E D F N ++ Y L EA +FD + + DVV+WN
Sbjct: 92 KFSLARD-------LFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK-DVVSWN 143
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
+M+ G A+ G +DE+R +F+KM RN++SWN +++ YV N + KEA LF
Sbjct: 144 AMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQ------- 196
Query: 220 SEFTMVS---LLNACAK---LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
S + ++S L+ K LG RQ V + NT +I Y + G
Sbjct: 197 SNWELISWNCLMGGYVKRNMLGDARQ--LFDRMPVRDVISWNT-----MISGYAQVGDLS 249
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+A ++FN P + + W +MV G NG +EA K F + N IS+ A+L
Sbjct: 250 QAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKN----EISYNAML---- 301
Query: 334 HSGKVNQAKDYFTLMTETYKIKP--SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
+G V K + E ++ P +I ++ M+ G+ G + +A KL MP D +
Sbjct: 302 -AGYVQYKK--MVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQ-RDCV 357
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
W +++S ++G+ E +A +E+ ++
Sbjct: 358 SWAAIISGYAQNGHYE---EALNMFVEMKRD 385
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/530 (20%), Positives = 223/530 (42%), Gaps = 104/530 (19%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
+F ++ + +LF WN ++ G+ ++ A LF D++ + +++ ++ YAQ G
Sbjct: 99 LFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLF-DLMPKKDV----VSWNAMLSGYAQNG 153
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ ++ ++ + + N ++ Y + G L EAR +F E + +++++WN ++
Sbjct: 154 FVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLF-ESQSNWELISWNCLM 208
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G K + ++R+LFD+M R+ +SWN+MISGY + +A LF E +++ F
Sbjct: 209 GGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDV----F 264
Query: 223 TMVSLLNACAKLGAIRQG-----------EWIHNFLVTNCFELNTIVVTA---------- 261
T ++++ + G + + E +N ++ + +V+
Sbjct: 265 TWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRN 324
Query: 262 ------IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
+I Y + G +A ++F+ +P++ W +++ G A NG+ EA+ +F ++
Sbjct: 325 ISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKR 384
Query: 316 SNLKPDYISFIAVLTACN-----------------------------------HSGKVNQ 340
+ +F L+ C G ++
Sbjct: 385 DGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDE 444
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLL 397
A D F + E + ++ M+ R G +A L SM PD I +L
Sbjct: 445 ANDVFEGIEE-----KDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVL 499
Query: 398 SACRKHGNIEMAKQAAKQIIELDKN-----ESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
SAC G I+ + + +D++ S Y M +L + + EEA LM+
Sbjct: 500 SACSHSGLID---RGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAEN---LMRN 553
Query: 453 VKIEKEP-------GCSLIEVDGEVHEFVAGG--RLHPKAPEVYLLLNDL 493
+ + G S I + E+ E A ++ P+ +Y+LL++L
Sbjct: 554 MPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNL 603
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 113/267 (42%), Gaps = 23/267 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H ++K G + +L G + A VF I++ ++ WNT+I G+++
Sbjct: 411 KQVHGQVVKAGFETGCFVGNALLGMYFK-CGSTDEANDVFEGIEEKDVVSWNTMIAGYAR 469
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
R A++LF M + ++P +T + A + GL G + + +
Sbjct: 470 HGFGRQALVLFESM-KKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTS 528
Query: 125 IHNT-IIYMYANCGFLSEARLMFDEVDTEFDVVAWN-----SMIIGLAKCGEIDESRRLF 178
H T +I + G L EA + + + +W S I G + GE ++ +
Sbjct: 529 KHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGE--KAAEMV 586
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI-KPSEFTMVSLLNACAKLGAI 237
KM +N+ + + + Y + ++ + ++ +M+E + K + ++ V + N
Sbjct: 587 FKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNK------- 639
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIID 264
IH F V +CF + A ++
Sbjct: 640 -----IHTFSVGDCFHPEKDRIYAFLE 661
>gi|357140545|ref|XP_003571826.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Brachypodium distachyon]
Length = 489
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 267/445 (60%), Gaps = 9/445 (2%)
Query: 54 IWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR 113
+ + +IR S S + + +L+ S ++P LT+P L +A A+L R LH
Sbjct: 26 LLDPLIRATSSSPSTPHLSFSLFLLLLRSALRPSHLTFPFLGRAAARLASPRLALSLHSH 85
Query: 114 VVKQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID 172
++ GL D I N+ ++MYA C AR +FDE+ + V+WN+++ G AKC ++
Sbjct: 86 PLRLGLLPCDLHIANSFVHMYAACALPDLARRLFDEIPRP-NPVSWNALLDGYAKCRDLS 144
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE----QNIKPSEFTMVSLL 228
+R +FD+M R+ VSW++MI G V+ +++EAL LF M+ ++ ++ TM+S+L
Sbjct: 145 AAREVFDRMPHRDVVSWSAMIDGCVKCGEYREALALFEMMEAAATGHGVRANDVTMISML 204
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
ACA LG +R+G +H +L F LN + T+++DMY KCG AL+VF VP
Sbjct: 205 GACAHLGDLRRGRQMHRYLQERGFLLNLRLATSLVDMYAKCGAISEALEVFRAVPVASTD 264
Query: 289 C--WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
WN+M+ GLA++G E ++LF +Q S + PD I+++ +L+AC H G V++A +F
Sbjct: 265 VLMWNAMIGGLAVHGMGMETVELFQEMQHSGVVPDEITYLGLLSACVHGGLVDEAWRFFC 324
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI 406
+ E ++P ++HY+C+VD L RAG LEEA +++SMP +P + G++L+AC HG +
Sbjct: 325 SL-EAQGLRPHVEHYACLVDVLSRAGRLEEAYGVVKSMPMEPSVSVLGAILNACHLHGWV 383
Query: 407 EMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEV 466
E+ + +Q++ L + Y+ +SN+YA + +++EA + R +M E ++K PG S I+V
Sbjct: 384 ELGEVVGRQLVRLQPDHDGRYIGLSNIYAVAKRWQEAKKARKVMSERGLKKIPGFSEIDV 443
Query: 467 DGEVHEFVAGGRLHPKAPEVYLLLN 491
G F+A + H + ++Y LL+
Sbjct: 444 GGRPCRFIAQDKTHSGSTDIYALLD 468
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 142/356 (39%), Gaps = 77/356 (21%)
Query: 7 IHAHLIKTGL--AKDPIAAS--RILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+H+H ++ GL IA S + A C P + A +F +I +PN WN ++ G+
Sbjct: 82 LHSHPLRLGLLPCDLHIANSFVHMYAACALP----DLARRLFDEIPRPNPVSWNALLDGY 137
Query: 63 SQ-----------SSTP--------------------RNAILLFIDMLVTSP---IQPQR 88
++ P R A+ LF M + ++
Sbjct: 138 AKCRDLSAAREVFDRMPHRDVVSWSAMIDGCVKCGEYREALALFEMMEAAATGHGVRAND 197
Query: 89 LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE 148
+T S+ A A LG R G Q+H + ++G + + +++ MYA CG +SEA +F
Sbjct: 198 VTMISMLGACAHLGDLRRGRQMHRYLQERGFLLNLRLATSLVDMYAKCGAISEALEVFRA 257
Query: 149 VD-TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
V DV+ WN+MI GLA G E +E
Sbjct: 258 VPVASTDVLMWNAMIGGLAVHG-------------------------------MGMETVE 286
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
LF+EMQ + P E T + LL+AC G + + L + ++D+
Sbjct: 287 LFQEMQHSGVVPDEITYLGLLSACVHGGLVDEAWRFFCSLEAQGLRPHVEHYACLVDVLS 346
Query: 268 KCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
+ G E A V ++P + +S +++ ++G+ + G Q L+PD+
Sbjct: 347 RAGRLEEAYGVVKSMPMEPSVSVLGAILNACHLHGWVE--LGEVVGRQLVRLQPDH 400
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/508 (34%), Positives = 278/508 (54%), Gaps = 44/508 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH G D AS ++ S G +N A +F +I + N+ W ++I G+ Q
Sbjct: 106 KQIHQQAFVFGYGSDIFVASALIDM-YSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQ 164
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPS----------LFKAYAQLGLARDGAQLHGRV 114
+ R A+ LF + L+ + + A A++ + +HG
Sbjct: 165 NERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLA 224
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
VK+G E + NT++ YA KCGEI S
Sbjct: 225 VKKGFEGCLAVGNTLMDAYA--------------------------------KCGEISVS 252
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-IKPSEFTMVSLLNACAK 233
R++FD M + SWNS+I+ Y +N EA LF +M ++ ++ + T+ ++L ACA
Sbjct: 253 RKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAH 312
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
GA++ G+ IH+ +V E N +V T+I+DMYCKCG E A + F+ + +K + W M
Sbjct: 313 SGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVM 372
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
V G M+G+ EA+K+F + +KP+YI+F++VL AC+H+G + + +F M +
Sbjct: 373 VAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFD 432
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
++P I+HYSCMVD LGRAG L+EA LI+ M PD I+WGSLL ACR H N+E+ + +A
Sbjct: 433 VEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISA 492
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
+++ +LD + YVL+SN+YA + ++++ R+LMK + K PG S++E G VH F
Sbjct: 493 RKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVF 552
Query: 474 VAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ G + HP+ ++Y L++L + +QE+G
Sbjct: 553 LVGDKEHPQHEKIYEYLDELNVKLQEVG 580
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 175/403 (43%), Gaps = 78/403 (19%)
Query: 47 IKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD 106
+ K +++ WN+II F++S A+ F M S + P R T+P K+ + L
Sbjct: 46 VDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLS-LHPNRSTFPCTIKSCSSLYDLCA 104
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G Q+H + G D F+ + +I MY+ CG+L++AR +FDE+ E +VV+W
Sbjct: 105 GKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEI-PERNVVSW-------- 155
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR-----------EMQEQ 215
SMISGYV+N + +EA+ LF+ E+
Sbjct: 156 -----------------------TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGV 192
Query: 216 NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
+ + +++ACA++ E +H V FE V ++D Y KCG +
Sbjct: 193 GVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVS 252
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNH 334
+VF+ + + + WNS++ A NG EA LFS + + ++ + ++ AVL AC H
Sbjct: 253 RKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAH 312
Query: 335 SGKVNQAK------------DYFTLMTETYKI------------------KPSIKHYSCM 364
SG + K D + T + + ++K ++ M
Sbjct: 313 SGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVM 372
Query: 365 VDALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLLSACRKHG 404
V G G +EA K+ M P+ I + S+L+AC G
Sbjct: 373 VAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAG 415
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 141/311 (45%), Gaps = 24/311 (7%)
Query: 175 RRLFDKMVSRNTV-SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
R +F K V + +V SWNS+I+ + R+ +AL F M++ ++ P+ T + +C+
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
L + G+ IH + + V +A+IDMY KCG A ++F+ +P++ + W SM
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI-------AVLTACNHSGKVNQAKDYFT 346
+ G N EA+ LF + + DY + +VL C S T
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVD-ETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVT 217
Query: 347 LMTETYKIKPSIKHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
+K + + ++DA + G + + K+ M + D W SL++ +
Sbjct: 218 ECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME-ETDVCSWNSLIAVYAQ 276
Query: 403 HGNIEMAKQAAKQIIELDKNESCGY-------VLMSNLYAASYQFEEAMEERLLMKEVKI 455
+G ++ +A ++ K Y VL++ ++ + Q + + ++++ E++
Sbjct: 277 NG---LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELED 333
Query: 456 EKEPGCSLIEV 466
G S++++
Sbjct: 334 NLVVGTSIVDM 344
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 267/440 (60%), Gaps = 6/440 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G++ YA VF ++ +L WN++I G+SQ + + + LF +++ + + +T +
Sbjct: 206 GELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKEVLDLF-NLMREANVTADSVTMVKV 264
Query: 95 FKAYAQLGLARDGA--QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE 152
A + L DG + + + ++ D ++ N++I MY G + AR +FD + E
Sbjct: 265 ILACSYL--CEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQ-E 321
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
++V+WN+M+ G A G++ +++LF++M RN +SW MISG + + +AL+LF+EM
Sbjct: 322 KNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEM 381
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+ N+KP E T+ S+L+AC+ LG + G+ +H ++ + + + V A+IDMYCKCG
Sbjct: 382 MDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVV 441
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
++AL+VF+ + KK W SM+ GLA+NG+ + +LFS + L+P + SFI +L AC
Sbjct: 442 DKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLAC 501
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H+G V++ +YF M Y ++P +KHY C+VD L R+G L+ A + I+ MP PD ++
Sbjct: 502 THAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVL 561
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
W LLSAC+ H N+ +A+ A +++ELD + S YVL+SN YA S ++++A R LM
Sbjct: 562 WRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSNTYAGSDRWDDASRMRDLMVV 621
Query: 453 VKIEKEPGCSLIEVDGEVHE 472
++K S IEV G ++
Sbjct: 622 GDVQKPSSWSSIEVIGATNK 641
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 246/531 (46%), Gaps = 82/531 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K +K+ HAHLI+T K+P + S ++ +N A F QI +P L I+N +IR
Sbjct: 70 IKSIKEQHAHLIRTHHHKNPKSMSNVIKSYALSRSHLNKANFAFIQIGQPTLLIFNYLIR 129
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G SQS P AI+++ D++ I LT+ LFKA +++ G H +V+K G
Sbjct: 130 GLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHVQVLKLGFG 189
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
FI N++I MY G L A+ +FD++D D+V+WNS+I G ++C
Sbjct: 190 SYLFIENSLIRMYGYFGELGYAQKVFDKMDDR-DLVSWNSLICGYSQCN----------- 237
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+FKE L+LF M+E N+ TMV ++ AC+ L
Sbjct: 238 --------------------RFKEVLDLFNLMREANVTADSVTMVKVILACSYLCEDGVV 277
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ + ++ +++ + ++IDMY + G + A +VF+ + +K + WN+M+ G A
Sbjct: 278 DSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATA 337
Query: 301 G-------------------------------YENEAIKLFSGLQSSNLKPDYISFIAVL 329
G ++A+KLF + +N+KPD I+ +VL
Sbjct: 338 GDLVAAKKLFNEMPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVL 397
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
+AC+H G ++ + M + IK + + ++D + G++++A ++ M D
Sbjct: 398 SACSHLGLLDTGQTVHEYMCR-HDIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKK-KD 455
Query: 390 AIIWGSLLSACRKHGNI----EMAKQAAKQIIELDKNESCGYVLM---SNLYAASYQFEE 442
++ W S++ +G + E+ Q + ++ G +L + L ++ E
Sbjct: 456 SVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFE 515
Query: 443 AMEERLLMKEVKIEKEPGC--SLIEVDGEV---HEFVAGGRLHPKAPEVYL 488
+ME ++ K GC L+ GE+ +EF+ + P P+V L
Sbjct: 516 SMEHVYGLRPEM--KHYGCVVDLLSRSGELDRAYEFI---KQMPVVPDVVL 561
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 249/412 (60%), Gaps = 8/412 (1%)
Query: 86 PQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQFIHNTIIYMYANCGFLSEARL 144
P +T S+ A A L R+G Q+H +VK+ L D ++N ++ MYA CG EAR
Sbjct: 8 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARC 67
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+FD + + VV+ S++ G AK +++++ +F +MV +N ++WN +I+ Y +N + +E
Sbjct: 68 IFDSMPSR-SVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEE 126
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF------ELNTIV 258
A+ LF +++ +I P+ +T ++LNAC + ++ G+ H ++ F E + V
Sbjct: 127 AIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFV 186
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
+++DMY K G + +VF + + WN+M+ G A NG +A+ LF + SN
Sbjct: 187 GNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNE 246
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
PD ++ I VL+AC HSG V++ + +F MTE + I PS HY+CMVD LGRAG L+EAE
Sbjct: 247 NPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAE 306
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASY 438
+LI+ MP++PD+++W SLL ACR H N+E+ ++ A ++ ELD S YVL+SN+YA
Sbjct: 307 ELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMG 366
Query: 439 QFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLL 490
++ + R MK+ + K+PGCS IE+ +++ F+A HP E++ L
Sbjct: 367 KWADVFRVRRSMKDRGVSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTL 418
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 140/332 (42%), Gaps = 72/332 (21%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILA---------------FCTSP------------- 33
++ +++HAH++K +D + + L F + P
Sbjct: 27 REGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAG 86
Query: 34 ---AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLT 90
+ ++ A +VF+Q+ + N+ WN +I ++Q+ AI LF+ L I P T
Sbjct: 87 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFV-QLKRDSIWPTHYT 145
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEF------DQFIHNTIIYMYANCGFLSEARL 144
Y ++ A + + + G Q H V+K+G F D F+ N+++ MY G + +
Sbjct: 146 YGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAK 205
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+F+ + D V+WN+MI+G A+ G + K+
Sbjct: 206 VFERMAAR-DNVSWNAMIVGYAQNG-------------------------------RAKD 233
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN-CFELNTIVVTAII 263
AL LF M N P TM+ +L+AC G + +G +F+ + + T ++
Sbjct: 234 ALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMV 293
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSC-WNSMV 294
D+ + G + A ++ +P + S W S++
Sbjct: 294 DLLGRAGHLKEAEELIKDMPTEPDSVLWASLL 325
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 313 LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAG 372
+ ++ PD ++ +V++AC + + M + +++ + + +VD + G
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 373 LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSN 432
EA + SMPS + S+L+ K N+E A+ Q++E KN VL++
Sbjct: 61 RTWEARCIFDSMPS-RSVVSETSILAGYAKSANVEDAQVVFSQMVE--KNVIAWNVLIA- 116
Query: 433 LYAASYQFEEAM 444
YA + + EEA+
Sbjct: 117 AYAQNGEEEEAI 128
>gi|356559204|ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 276/512 (53%), Gaps = 53/512 (10%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTIIR 60
K+ +++H + K G + ++ + G + AY VF +++ N+F W I+
Sbjct: 137 KEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYKVFAEMRDKNVFAWTAIVA 196
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+A LF + PQR
Sbjct: 197 AHVACRDMVSARRLF-------DLAPQR-------------------------------- 217
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + N ++ Y G + AR +FD + + DV++WN+++ G A GE++ +LF++
Sbjct: 218 -DVVLWNVVVSGYIELGDMVAARELFDRM-PDRDVMSWNTVLSGYATNGEVESFVKLFEE 275
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREM-----------QEQNIKPSEFTMVSLLN 229
M RN SWN +I GYVRN FKEALE F+ M + + P+++T+V++L
Sbjct: 276 MPVRNVYSWNGLIGGYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLT 335
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
AC++LG + G+W+H + + ++ N V A+IDMY KCG E+AL VF+ + K +
Sbjct: 336 ACSRLGDLEMGKWVHVYAESIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIIT 395
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WN+++ GLAM+G+ +A+ LF ++ + +PD ++F+ +L+AC H G V +F M
Sbjct: 396 WNTIINGLAMHGHVADALSLFERMKRAGERPDGVTFVGILSACTHMGLVRNGLLHFQSMV 455
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ Y I P I+HY CMVD LGRAGL+++A ++R MP +PDA+IW +LL ACR + N+EMA
Sbjct: 456 DDYSIVPQIEHYGCMVDLLGRAGLIDKAVDIVRKMPMEPDAVIWAALLGACRMYKNVEMA 515
Query: 410 KQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGE 469
+ A +++IEL+ N +V++SN+Y + ++ ++ M++ K PGCS+I +
Sbjct: 516 ELALQRLIELEPNNPGNFVMVSNIYKDLGRSQDVARLKVAMRDTGFRKVPGCSVIGCNDS 575
Query: 470 VHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ EF + HP+ +Y L L +L++ G
Sbjct: 576 MVEFYSLDERHPETDSIYRALQGLTILLRSHG 607
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 192/419 (45%), Gaps = 57/419 (13%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L +I A ++ GL + + C G I A VF + +PN WN + RG++
Sbjct: 38 LHQIQAQIVTHGLEGNDYVTPSFITACARLGG-IRRARRVFDKTAQPNGATWNAMFRGYA 96
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
Q++ + ++LF M + P T+P + K+ A A++G ++H V K+G + +
Sbjct: 97 QANCHLDVVVLFARMH-RAGASPNCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSNT 155
Query: 124 FIHNTIIYMYANCG--FLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
F+ +I+MY+ G F+++A +F E+ + +V AW +++ C ++ +RRLFD
Sbjct: 156 FVGCALIHMYSLRGGVFVADAYKVFAEMRDK-NVFAWTAIVAAHVACRDMVSARRLFDLA 214
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ V WN ++SGY+ A ELF M ++++
Sbjct: 215 PQRDVVLWNVVVSGYIELGDMVAARELFDRMPDRDVM----------------------S 252
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
W NT ++ Y G E +++F +P + + WN ++ G NG
Sbjct: 253 W------------NT-----VLSGYATNGEVESFVKLFEEMPVRNVYSWNGLIGGYVRNG 295
Query: 302 YENEAIKLFS---------GLQSSN--LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
EA++ F G + S+ + P+ + +AVLTAC+ G + K + + E
Sbjct: 296 LFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGK-WVHVYAE 354
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ K ++ + ++D + G++E+A + + D I W ++++ HG++ A
Sbjct: 355 SIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDV-KDIITWNTIINGLAMHGHVADA 412
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 59/335 (17%)
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
S I A+ G I +RR+FDK N +WN+M GY + + + LF M P
Sbjct: 59 SFITACARLGGIRRARRVFDKTAQPNGATWNAMFRGYAQANCHLDVVVLFARMHRAGASP 118
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG--------- 270
+ FT ++ +CA A ++GE +H + F+ NT V A+I MY G
Sbjct: 119 NCFTFPMVVKSCATANAAKEGEEVHCVVAKRGFKSNTFVGCALIHMYSLRGGVFVADAYK 178
Query: 271 ----------------------CPE--RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
C + A ++F+ P++ + WN +V G G A
Sbjct: 179 VFAEMRDKNVFAWTAIVAAHVACRDMVSARRLFDLAPQRDVVLWNVVVSGYIELGDMVAA 238
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+LF + D +S+ VL+ +G+V F + E ++ ++ ++ ++
Sbjct: 239 RELFDRMPDR----DVMSWNTVLSGYATNGEVES----FVKLFEEMPVR-NVYSWNGLIG 289
Query: 367 ALGRAGLLEEAEKLIRSM----------PSD----PDAIIWGSLLSACRKHGNIEMAK-- 410
R GL +EA + + M SD P+ ++L+AC + G++EM K
Sbjct: 290 GYVRNGLFKEALECFKRMLVLVEGEGKEGSDGVVVPNDYTVVAVLTACSRLGDLEMGKWV 349
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+ I N G L+ ++YA E+A++
Sbjct: 350 HVYAESIGYKGNLFVGNALI-DMYAKCGVIEKALD 383
>gi|242061934|ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
gi|241932087|gb|EES05232.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
Length = 590
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 231/381 (60%), Gaps = 5/381 (1%)
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVD-TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ N ++ +Y G L +AR +FD T DVV+WN+M+ G KCG+++ +R +F +M
Sbjct: 118 VTNCLLKLYCALGMLPDARRVFDTSGATALDVVSWNTMVSGYGKCGDLEAAREVFVRMPE 177
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R VSW++MI VR +F EAL +F +M KP +VS+L CA LGA+ +G W+
Sbjct: 178 RGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGFKPDAVVLVSVLKTCAHLGALERGRWV 237
Query: 244 HNFLVTNCF---ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
H FL N ++ TA++DMYCKCGC A VF+ V + WN+M+ GLAMN
Sbjct: 238 HRFLKAERLGGRPGNVMLETALVDMYCKCGCMNEAWWVFDGVQSHDVVLWNAMIGGLAMN 297
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ A++LF + P+ +F+ L AC H+G+V++ +D F M + + I+P +H
Sbjct: 298 GHGKRALELFRRMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFRSMRD-HGIEPRREH 356
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y C+ D LGRAGLLEEAE ++ MP +P A WG+L+S+C H N+ + ++ K++IEL+
Sbjct: 357 YGCLADLLGRAGLLEEAEGVLLDMPMEPHASQWGALMSSCLMHNNVGVGERVGKKLIELE 416
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
++ YV + NLYA + +E+A R +M+E +KE G S IE +G VHEF +G H
Sbjct: 417 PDDGGRYVALFNLYAVNGLWEDAKALRKMMEERGAKKETGLSFIEWNGLVHEFRSGDTRH 476
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ +Y LL D+ +Q +G
Sbjct: 477 PQTRLIYALLEDMEQRLQLIG 497
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
GD+ A VF ++ + L W+ +I ++ A+ +F D + + +P + S+
Sbjct: 163 GDLEAAREVFVRMPERGLVSWSAMIDACVRTGEFSEALRVF-DQMTGNGFKPDAVVLVSV 221
Query: 95 FKAYAQLGLARDGAQLHGRVVKQ----GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
K A LG G +H R +K G + + ++ MY CG ++EA +FD V
Sbjct: 222 LKTCAHLGALERGRWVH-RFLKAERLGGRPGNVMLETALVDMYCKCGCMNEAWWVFDGVQ 280
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
+ DVV WN+MI GLA N K ALELFR
Sbjct: 281 SH-DVVLWNAMIGGLAM-------------------------------NGHGKRALELFR 308
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
M ++ P+E T V L AC G + +GE + + + E + D+ + G
Sbjct: 309 RMLDKGFVPNESTFVVALCACIHTGRVDEGEDVFRSMRDHGIEPRREHYGCLADLLGRAG 368
Query: 271 CPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
E A V +P + S W +++ M + N + G + L+PD
Sbjct: 369 LLEEAEGVLLDMPMEPHASQWGALMSSCLM--HNNVGVGERVGKKLIELEPD 418
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 167/461 (36%), Positives = 273/461 (59%), Gaps = 5/461 (1%)
Query: 36 DINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLF 95
++ YA +F + F++N +I+ + P +I+L+ ++L ++P T+ +F
Sbjct: 24 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLY-NLLSFDGLRPSHHTFNFIF 82
Query: 96 KAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDV 155
A A AR LH + + G E D F T+I YA G L AR +FDE+ ++ DV
Sbjct: 83 AASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEM-SKRDV 141
Query: 156 VAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-E 214
WN+MI G + G++ + LFD M +N SW ++ISG+ +N + EAL++F M+ +
Sbjct: 142 PVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKD 201
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+++KP+ T+VS+L ACA LG + G + + N F N V A I+MY KCG +
Sbjct: 202 KSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDV 261
Query: 275 ALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A ++F + ++ L WNSM+ LA +G +EA+ LF+ + KPD ++F+ +L AC
Sbjct: 262 AKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACV 321
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
H G V + ++ F M E +KI P ++HY CM+D LGR G L+EA LI++MP PDA++W
Sbjct: 322 HGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVW 381
Query: 394 GSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEV 453
G+LL AC HGN+E+A+ A++ + +L+ V+MSN+YAA+ +++ + R LMK+
Sbjct: 382 GTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKE 441
Query: 454 KIEKEPGCS-LIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+ K G S +EV +VH+F + HP++ E+Y +L ++
Sbjct: 442 TMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEI 482
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 284/497 (57%), Gaps = 36/497 (7%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH H++K GL D + S L S G + A +VF Q++ +L WN+II + Q++
Sbjct: 244 IHLHVLKHGLDSD-VFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNN 302
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QGLEFDQFI 125
P A+ F M + I+P LT SL ++QL R + G V++ + L+ D I
Sbjct: 303 DPSTALRFFKGMQLGG-IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVI 361
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
N ++ MYA K G ++ + +FD++ ++
Sbjct: 362 GNALVNMYA--------------------------------KLGYMNCAHTVFDQLPRKD 389
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
T+SWN++++GY +N EA++ + M+E ++ P++ T VS++ A + +GA++QG IH
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIH 449
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
L+ N L+ V T +ID+Y KCG E A+ +F +P+ WN+++ L ++G
Sbjct: 450 AKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGE 509
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA++LF + + +K D+I+F+++L+AC+HSG V++ + F +M + Y IKPS+KHY CM
Sbjct: 510 EALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCM 569
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG LE+A +L+R+MP PDA IWG+LLSAC+ +GN E+ A+ +++E+D
Sbjct: 570 VDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENV 629
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+SN+YA + ++E ++ R L ++ + K PG S + V + F G + HPK
Sbjct: 630 GYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYT 689
Query: 485 EVYLLLNDLGLLIQEMG 501
E+Y L L ++ +G
Sbjct: 690 EIYKELKVLSAKMKSLG 706
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 201/418 (48%), Gaps = 40/418 (9%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
D KK+H + K G D A+ L S G ++ A+ VF + ++ WN +I GF
Sbjct: 139 DGKKVHCCVFKMGFEDDVFVAAS-LVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGF 197
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
Q+ A L ++ + ++ +T S+ AQ +G +H V+K GL+ D
Sbjct: 198 CQNGNAAGA-LGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSD 256
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ N +I MY+ G L +A+++FD+++ D+V+W
Sbjct: 257 VFVSNALINMYSKFGRLQDAQMVFDQMEVR-DLVSW------------------------ 291
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
NS+I+ Y +N AL F+ MQ I+P T+VSL + ++L R
Sbjct: 292 -------NSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRS 344
Query: 243 IHNFLVTN-CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
I F++ + + ++ A+++MY K G A VF+ +P+K WN++V G NG
Sbjct: 345 ILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNG 404
Query: 302 YENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQA-KDYFTLMTETYKIKPSIK 359
+EAI ++ ++ + P+ ++++++ A +H G + Q K + L+ + + +
Sbjct: 405 LASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA 464
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
+C++D G+ G LE+A L +P D ++ W +++++ HG E A Q K ++
Sbjct: 465 --TCLIDLYGKCGRLEDAMSLFYEIPRDT-SVPWNAIIASLGIHGRGEEALQLFKDML 519
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 9/245 (3%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEAL----ELFREMQEQNIKPSEFTM 224
G+I SR FD + +N SWNS+IS YVR K+ EA+ +LF +++P +T
Sbjct: 68 GDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTF 127
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
+L AC L G+ +H + FE + V +++ +Y + G + A +VF +P
Sbjct: 128 PPILKACVSL---VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPV 184
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
K + WN+M+ G NG A+ + + ++ +K D I+ ++L C S V
Sbjct: 185 KDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV-L 243
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
L + + + + +++ + G L++A+ + M D + W S+++A ++
Sbjct: 244 IHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNN 302
Query: 405 NIEMA 409
+ A
Sbjct: 303 DPSTA 307
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/532 (32%), Positives = 287/532 (53%), Gaps = 57/532 (10%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H H +KT D + + L +++ A +F + NL +N II G+++S
Sbjct: 296 QLHGHALKTDFGTDVVIGTATLDMYMK-CNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS 354
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
L +D ++ F+A A + +G Q+HG +K + + +
Sbjct: 355 DKG-----LGLD----------EVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICV 399
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI----------------------- 162
N I+ MY CG L EA L+F+E+ + D V+WN++I
Sbjct: 400 ANAILDMYGKCGALVEACLVFEEMVSR-DAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIK 458
Query: 163 --------IGLA------KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
+G+A KCG ++++ +L D++ + VSWN++ISG+ + +EA +
Sbjct: 459 SRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKT 518
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
F +M E + P FT ++L+ CA L + G+ IH ++ + + + + ++DMY K
Sbjct: 519 FSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSK 578
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CG + +F P + WN+MV G A +G EA+K+F +Q N+KP++ +F+AV
Sbjct: 579 CGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAV 638
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC H G V + YF M Y + P ++HYSC+VD +GR+G + +A +LI MP +
Sbjct: 639 LRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEA 698
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
DA+IW +LLS C+ HGN+E+A++AA I++L+ +S YVL+SN+YA + + E + R
Sbjct: 699 DAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRK 758
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEM 500
+M+ ++KEPGCS IE+ EVH F+ G + HP++ E+Y +L +L EM
Sbjct: 759 MMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIY---ENLDVLTDEM 807
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 174/397 (43%), Gaps = 57/397 (14%)
Query: 15 GLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILL 74
G+ + + + F + GDI A +F + + ++ WN++I G+ + R I +
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
Query: 75 FIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYA 134
F+ M + R T+ + K+ + L G Q+HG VK G + D + ++ MYA
Sbjct: 162 FLQMGRMGTV-FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYA 220
Query: 135 NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMIS 194
KC ++D S + F M +N VSW+++I+
Sbjct: 221 --------------------------------KCKKLDCSIQFFHSMPEKNWVSWSAIIA 248
Query: 195 GYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFEL 254
G V+N + LELF+EMQ+ + S+ T S+ +CA L A+R G +H + F
Sbjct: 249 GCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGT 308
Query: 255 NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ 314
+ ++ TA +DMY KC A ++FN++P L +N+++ G A +
Sbjct: 309 DVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS-------------- 354
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL----GR 370
L D +S AC D L +K + C+ +A+ G+
Sbjct: 355 DKGLGLDEVSLSGAFRAC-----AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGK 409
Query: 371 AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
G L EA + M S DA+ W ++++A ++GN E
Sbjct: 410 CGALVEACLVFEEMVS-RDAVSWNAIIAAHEQNGNEE 445
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 11/315 (3%)
Query: 81 TSPIQP---------QRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIY 131
T PI P ++ T+ +F+ + G Q H R++ + F+ N +I
Sbjct: 26 TLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQ 85
Query: 132 MYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNS 191
MY C L A +FD + + D V+WN+M+ G A G+I +++LFD M R+ VSWNS
Sbjct: 86 MYIKCSDLEFAFKVFDGM-PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNS 144
Query: 192 MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
+ISGY+ N ++ +++F +M T +L +C+ L G IH V
Sbjct: 145 LISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG 204
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
F+ + + +A++DMY KC + ++Q F+++P+K W++++ G N ++LF
Sbjct: 205 FDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFK 264
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA 371
+Q + + +F +V +C + +T + + +D +
Sbjct: 265 EMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKT-DFGTDVVIGTATLDMYMKC 323
Query: 372 GLLEEAEKLIRSMPS 386
L +A+KL S+P+
Sbjct: 324 NNLSDAQKLFNSLPN 338
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 172/421 (40%), Gaps = 64/421 (15%)
Query: 6 KIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+IH +K G D + S +L A C I + F + + N W+ II G
Sbjct: 195 QIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQF----FHSMPEKNWVSWSAIIAGC 250
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
Q+ R + LF +M + + + T+ S+F++ A L R G+QLHG +K D
Sbjct: 251 VQNDDLRGGLELFKEMQ-KAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTD 309
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
I + MY KC + ++++LF+ +
Sbjct: 310 VVIGTATLDMYM--------------------------------KCNNLSDAQKLFNSLP 337
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+ N S+N++I GY R+ ++ + E ++ ACA + +G
Sbjct: 338 NHNLQSYNAIIVGYARS--------------DKGLGLDEVSLSGAFRACAVIKGDLEGLQ 383
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H + + + N V AI+DMY KCG A VF + + WN+++ NG
Sbjct: 384 VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGN 443
Query: 303 ENEAIKLF--SGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
E + + LF + + S L D IA++ + G + +A+ + E ++
Sbjct: 444 EEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQ-----TVVS 498
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
++ ++ EEA+K M DPD + ++L C +E+ KQ QII
Sbjct: 499 WNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQII 558
Query: 418 E 418
+
Sbjct: 559 K 559
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 76/159 (47%), Gaps = 3/159 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IHA +IK L D +S ++ S G++ L+F + + WN ++ G++Q
Sbjct: 551 KQIHAQIIKKELQSDAYISSTLVDM-YSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 609
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQ-LHGRVVKQGLEFDQ 123
A+ +F M + + ++P T+ ++ +A +GL G H + GL+
Sbjct: 610 HGLGEEALKIFEYMQLEN-VKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQL 668
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
++ ++ + G +S+A + + + E D V W +++
Sbjct: 669 EHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 707
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 284/497 (57%), Gaps = 36/497 (7%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH H++K GL D + S L S G + A +VF Q++ +L WN+II + Q++
Sbjct: 244 IHLHVLKHGLDSD-VFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNN 302
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QGLEFDQFI 125
P A+ F M + I+P LT SL ++QL R + G V++ + L+ D I
Sbjct: 303 DPSTALRFFKGMQLGG-IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVI 361
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
N ++ MYA K G ++ + +FD++ ++
Sbjct: 362 GNALVNMYA--------------------------------KLGYMNCAHTVFDQLPRKD 389
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
T+SWN++++GY +N EA++ + M+E ++ P++ T VS++ A + +GA++QG IH
Sbjct: 390 TISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIH 449
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
L+ N L+ V T +ID+Y KCG E A+ +F +P+ WN+++ L ++G
Sbjct: 450 AKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGE 509
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA++LF + + +K D+I+F+++L+AC+HSG V++ + F +M + Y IKPS+KHY CM
Sbjct: 510 EALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCM 569
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG LE+A +L+R+MP PDA IWG+LLSAC+ +GN E+ A+ +++E+D
Sbjct: 570 VDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENV 629
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+SN+YA + ++E ++ R L ++ + K PG S + V + F G + HPK
Sbjct: 630 GYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYT 689
Query: 485 EVYLLLNDLGLLIQEMG 501
E+Y L L ++ +G
Sbjct: 690 EIYKELKVLSAKMKSLG 706
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 201/418 (48%), Gaps = 40/418 (9%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
D KK+H + K G D A+ L S G ++ A+ VF + ++ WN +I GF
Sbjct: 139 DGKKVHCCVFKMGFEDDVFVAAS-LVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGF 197
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
Q+ A L ++ + ++ +T S+ AQ +G +H V+K GL+ D
Sbjct: 198 CQNGNAAGA-LGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSD 256
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ N +I MY+ G L +A+++FD+++ D+V+WN
Sbjct: 257 VFVSNALINMYSKFGRLQDAQMVFDQMEVR-DLVSWN----------------------- 292
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
S+I+ Y +N AL F+ MQ I+P T+VSL + ++L R
Sbjct: 293 --------SIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRS 344
Query: 243 IHNFLVTN-CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
I F++ + + ++ A+++MY K G A VF+ +P+K WN++V G NG
Sbjct: 345 ILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNG 404
Query: 302 YENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQA-KDYFTLMTETYKIKPSIK 359
+EAI ++ ++ + P+ ++++++ A +H G + Q K + L+ + + +
Sbjct: 405 LASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA 464
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
+C++D G+ G LE+A L +P D ++ W +++++ HG E A Q K ++
Sbjct: 465 --TCLIDLYGKCGRLEDAMSLFYEIPRDT-SVPWNAIIASLGIHGRGEEALQLFKDML 519
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 118/245 (48%), Gaps = 9/245 (3%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEAL----ELFREMQEQNIKPSEFTM 224
G+I SR FD + +N SWNS+IS YVR K+ EA+ +LF +++P +T
Sbjct: 68 GDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTF 127
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
+L AC L G+ +H + FE + V +++ +Y + G + A +VF +P
Sbjct: 128 PPILKACVSL---VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPV 184
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
K + WN+M+ G NG A+ + + ++ +K D I+ ++L C S V
Sbjct: 185 KDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV-L 243
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
L + + + + +++ + G L++A+ + M D + W S+++A ++
Sbjct: 244 IHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNN 302
Query: 405 NIEMA 409
+ A
Sbjct: 303 DPSTA 307
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 264/463 (57%), Gaps = 32/463 (6%)
Query: 39 YAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAY 98
YA +F + N W+ +I G+ S + A+ LF M++ + P +T S+ +A
Sbjct: 263 YARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRAC 322
Query: 99 AQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAW 158
A+L G +LH ++K G D + NT++ MYA
Sbjct: 323 AKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYA------------------------ 358
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
KCG ID++ R FD+M +++VS+++++SG V+N AL +FR MQ I
Sbjct: 359 --------KCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGID 410
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
P TM+ +L AC+ L A++ G H +L+ F +T++ A+IDMY KCG A +V
Sbjct: 411 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 470
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
FN + + + WN+M+ G ++G EA+ LF L + LKPD I+FI +L++C+HSG V
Sbjct: 471 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 530
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
+ + +F M+ + I P ++H CMVD LGRAGL++EA IR+MP +PD IW +LLS
Sbjct: 531 MEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 590
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
ACR H NIE+ ++ +K+I L + +VL+SN+Y+A+ ++++A R+ K+ ++K
Sbjct: 591 ACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 650
Query: 459 PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
PGCS IE++G VH FV G + H + ++ L +L + ++ +G
Sbjct: 651 PGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLG 693
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 193/410 (47%), Gaps = 37/410 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ + KKIH H +K D ++ S + A +F +I P++ +WN IIR
Sbjct: 24 LTEAKKIHQHFLKNTSNADSSVLHKLTRLYLS-CNQVVLARRLFDEIPNPSVILWNQIIR 82
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++ + AI L+ ML ++P + TYP + KA + L DG ++H GLE
Sbjct: 83 AYAWNGPFDGAIDLYHSMLHLG-VRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLE 141
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ ++ YA KCG + E++RLF
Sbjct: 142 SDVFVCTALVDFYA--------------------------------KCGILVEAQRLFSS 169
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ V+WN+MI+G +A++L +MQE+ I P+ T+V +L + A+ G
Sbjct: 170 MSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHG 229
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H + V F+ +V T ++DMY KC C A ++F+ + + W++M+ G +
Sbjct: 230 KALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVAS 289
Query: 301 GYENEAIKLFSGLQSSN-LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
EA++LF + + + P ++ +VL AC +++ + + + + I
Sbjct: 290 DCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVL-DIL 348
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ ++ + G++++A + M + D++ + +++S C ++GN +A
Sbjct: 349 LGNTLLSMYAKCGVIDDAIRFFDEM-NPKDSVSFSAIVSGCVQNGNAAVA 397
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 188/443 (42%), Gaps = 78/443 (17%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++D +IH+H GL D + ++ F + G + A +F+ + ++ WN +I
Sbjct: 125 IEDGVEIHSHAKMFGLESDVFVCTALVDF-YAKCGILVEAQRLFSSMSHRDVVAWNAMIA 183
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G S +A+ L + M I P T + + G LHG V++ +
Sbjct: 184 GCSLYGLCDDAVQLIMQM-QEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFD 242
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ ++ MYA C L AR ++FD
Sbjct: 243 NGVVVGTGLLDMYAKCQCLLYAR--------------------------------KIFDV 270
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-IKPSEFTMVSLLNACAKLGAIRQ 239
M RN VSW++MI GYV + KEALELF +M ++ + P+ T+ S+L ACAKL + +
Sbjct: 271 MGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSR 330
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G +H +++ L+ ++ ++ MY KCG + A++ F+ + K ++++V G
Sbjct: 331 GRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQ 390
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH------------------------- 334
NG A+ +F +Q S + PD + + VL AC+H
Sbjct: 391 NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLI 450
Query: 335 ----------SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
GK++ A++ F M + I ++ M+ G GL EA L +
Sbjct: 451 CNALIDMYSKCGKISFAREVFNRMD-----RHDIVSWNAMIIGYGIHGLGMEALGLFHDL 505
Query: 385 PS---DPDAIIWGSLLSACRKHG 404
+ PD I + LLS+C G
Sbjct: 506 LALGLKPDDITFICLLSSCSHSG 528
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 145/365 (39%), Gaps = 68/365 (18%)
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
Y L +A Q + ++H +K D + + + +Y +C + AR +FDE+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
V+ W N +I Y N F A++L+
Sbjct: 70 PNP-SVILW-------------------------------NQIIRAYAWNGPFDGAIDLY 97
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
M ++P+++T +L AC+ L AI G IH+ E + V TA++D Y KC
Sbjct: 98 HSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKC 157
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G A ++F+++ + + WN+M+ G ++ G ++A++L +Q + P+ + + VL
Sbjct: 158 GILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL 217
Query: 330 TACNHSGKVNQAKD-------------------------------YFTLMTETYKIKPSI 358
+ + K Y + + ++ +
Sbjct: 218 PTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEV 277
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSM----PSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
+S M+ + ++EA +L M DP + GS+L AC K ++ ++
Sbjct: 278 S-WSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHC 336
Query: 415 QIIEL 419
II+L
Sbjct: 337 YIIKL 341
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 34/237 (14%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+H ++IK G D + + +L+ + G I+ A F ++ + ++ I+ G Q
Sbjct: 332 RKLHCYIIKLGSVLDILLGNTLLSM-YAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQ 390
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ +F M+ S I P T + A + L + G HG ++ +G D
Sbjct: 391 NGNAAVALSIF-RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTL 449
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I N +I MY+ CG +S AR +F+ +D D+V+WN+MIIG
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRH-DIVSWNAMIIGYG------------------ 490
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
I G EAL LF ++ +KP + T + LL++C+ G + +G
Sbjct: 491 --------IHGL-----GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGR 534
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/477 (34%), Positives = 278/477 (58%), Gaps = 12/477 (2%)
Query: 18 KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFID 77
K + + +LA ++ G I A +F +I +P++F +N ++ + ++ +A L F
Sbjct: 34 KTTVTWNSMLAGYSNRRGKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQ 93
Query: 78 MLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV-VKQGLEFDQFIHNTIIYMYANC 136
M P++ ++ ++ ++Q G+ +L + V+ + + N +I Y
Sbjct: 94 M----PVK-DTASWNTMISGFSQNGMMDQARELFLVMPVRNSVSW-----NAMISGYVES 143
Query: 137 GFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY 196
G L A+ +F EV VVAW +MI G K G+I+ + + F++M +N V+WN+MI+GY
Sbjct: 144 GDLDLAKQLF-EVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGY 202
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
+ N + + L+LF+ M E +P+ ++ S+L C+ L A++ G+ +H + + N
Sbjct: 203 IENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNI 262
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS 316
T+++ MYCKCG E A ++F +P+K + WN+M+ G A +G +A+ LF ++
Sbjct: 263 TAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDE 322
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEE 376
+KPD+I+F+AVL+ACNH+G V+ +YF M Y ++ HY+C+VD LGR G L E
Sbjct: 323 GMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVE 382
Query: 377 AEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAA 436
A LI+ MP P + I+G+LL ACR H N+E+A+ AAK ++ LD + GYV ++N+YAA
Sbjct: 383 AVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAA 442
Query: 437 SYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+++ R MK+ K+ K PG S IEV VHEF +G R+HP+ ++ LN+L
Sbjct: 443 MNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNEL 499
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 59/312 (18%)
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYV-RNVKFKEALELFREM 212
+V++ N +I + G+++ + R+F+ M + TV+WNSM++GY R K K A +LF +
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIR----------QGEW-------IHNFLVTNCFEL- 254
E +I + L+ A + + R W N ++ EL
Sbjct: 64 PEPDIFSYNIMLACYLHN-ADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELF 122
Query: 255 ------NTIVVTAIIDMYCKCG-----------CPERAL--------------------Q 277
N++ A+I Y + G P R++ +
Sbjct: 123 LVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEK 182
Query: 278 VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK 337
F +P K L WN+M+ G N +KLF + S +P+ S +VL C++
Sbjct: 183 YFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSA 242
Query: 338 VNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLL 397
+ K L+ ++ + +I + ++ + G LE+A KL MP D + W +++
Sbjct: 243 LKLGKQVHQLICKS-PVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQK-DVVTWNAMI 300
Query: 398 SACRKHGNIEMA 409
S +HG E A
Sbjct: 301 SGYAQHGAGEKA 312
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 275/471 (58%), Gaps = 15/471 (3%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTY 91
AG +N A +F ++ ++ W ++ G+ Q+ A LF +M P+R +++
Sbjct: 156 AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM-------PKRNVVSW 208
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
++ YAQ G L ++ + E ++ ++ Y G + +A +F+ +
Sbjct: 209 TAMISGYAQNG----EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAM-P 263
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
E V A N+M++G + G +D ++ +F+KM R+ +W++MI Y +N EAL FRE
Sbjct: 264 EHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFRE 323
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + ++P+ +++S+L CA L + G +H ++ F+++ V+A+I MY KCG
Sbjct: 324 MLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGN 383
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
++A +VF+T K + WNSM+ G A +G +A+ +F ++ + + PD I++I LTA
Sbjct: 384 LDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTA 443
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C+++GKV + ++ F MT I+P +HYSCMVD LGR+GL+EEA LI++MP +PDA+
Sbjct: 444 CSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAV 503
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IWG+L+ ACR H N E+A+ AAK+++EL+ + YVL+S++Y + ++E+A + R +
Sbjct: 504 IWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFIS 563
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRL-HPKAPEVYLLLNDLGLLIQEMG 501
+ K PGCS IE D VH F +G L HP+ + +L L L+ E G
Sbjct: 564 SRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESG 614
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 177/416 (42%), Gaps = 67/416 (16%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM---------LVTSPI 84
AG+I A F + +N ++ G+ ++ P A+ LF M + S +
Sbjct: 30 AGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGL 89
Query: 85 QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL 144
+R T P A A + +++ Y G L++A
Sbjct: 90 SLRRQTLPDAAAALASIPFPPSVVSF----------------TSLLRGYVRHGLLADAIR 133
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+F ++ E + V++ ++ GL G ++E+RRLFD+M R+ V+W +M+SGY + + E
Sbjct: 134 LFQQM-PERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITE 192
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
A LF EM ++N+ + ++++ A+ G + + + E N + TA++
Sbjct: 193 ARALFDEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLV 244
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG----------------------- 301
Y + G E A ++FN +P+ ++ N+M+ G G
Sbjct: 245 GYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAM 304
Query: 302 ---YEN-----EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
YE EA+ F + ++P+Y S I++LT C ++ ++ M
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC-S 363
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ S ++ + G L++A+++ + D ++W S+++ +HG E A
Sbjct: 364 FDMDVFAVSALITMYIKCGNLDKAKRVFHTF-EPKDIVMWNSMITGYAQHGLGEQA 418
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 51/295 (17%)
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
N+ I LA+ G I+ +R F+ M R T S+N++++GY RN AL LFR M +++
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 219 -----------------------------PSEFTMVSLLNACAKLG----AIRQGEWIHN 245
PS + SLL + G AIR
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIR------- 133
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
L E N + T ++ G A ++F+ +P + + W +M+ G G E
Sbjct: 134 -LFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITE 192
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A LF + N+ +S+ A+++ +G+VN A+ F +M E ++ ++ M+
Sbjct: 193 ARALFDEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAML 243
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+AG +E+A +L +MP P A +++ + G ++ AK +++ E D
Sbjct: 244 VGYIQAGHVEDAAELFNAMPEHPVAAC-NAMMVGFGQRGMVDAAKTVFEKMCERD 297
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 130/309 (42%), Gaps = 37/309 (11%)
Query: 14 TGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAIL 73
+ + P+AA + G ++ A VF ++ + + W+ +I+ + Q+ A+
Sbjct: 260 NAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALS 319
Query: 74 LFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMY 133
F +ML ++P + S+ A L + G ++H +++ + D F + +I MY
Sbjct: 320 TFREMLWRG-VRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMY 378
Query: 134 ANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMI 193
CG L +A+ +F + + D+V WNSMI G A+ G
Sbjct: 379 IKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHG------------------------ 413
Query: 194 SGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN-CF 252
++AL +F +M+ + P T + L AC+ G +++G I N + N
Sbjct: 414 -------LGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSI 466
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFS 311
+ ++D+ + G E A + +P + W +++ M + N I F+
Sbjct: 467 RPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRM--HRNAEIAEFA 524
Query: 312 GLQSSNLKP 320
+ L+P
Sbjct: 525 AKKLLELEP 533
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/489 (33%), Positives = 272/489 (55%), Gaps = 3/489 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +HA +++ D + + ++ + G I+ + VF +++ N+ W ++I G +
Sbjct: 145 KHLHARIVRVEPFLDVLVGNGLVDM-YAKCGLIDASKRVFNTLREHNVVTWTSLISGIAH 203
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ +F M I + L + ++ G QLHG VK G+
Sbjct: 204 FGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISI-GEQLHGFTVKTGMNSSVP 262
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N + MYA CG +A L F E DV++W +MI + G ++ +R F++M R
Sbjct: 263 VGNATLSMYAKCGDFEKASLAF-ETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPER 321
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N +SWN+M+ Y +N ++E L+L+ M Q ++P T V+++ AC++L + G I
Sbjct: 322 NVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQIL 381
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ V + VV + I +Y +CG E A +F+++ +K L WNS++ G A NG
Sbjct: 382 SQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGM 441
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+ I++F + + KPD+I++IA+L+ C+HSG V +AK +F MT+ + I +++H+ CM
Sbjct: 442 KVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCM 501
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD GRAGLL+ A +I MP P+A IWG+LLSACR H + EMA+ A K ++EL+
Sbjct: 502 VDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEMAELAMKNLLELNTENF 561
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
Y+L++N Y++ + E E R +MKE +++K+PGCS IEV VH F A HP+
Sbjct: 562 ESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIEVCNRVHVFTANDTSHPQVK 621
Query: 485 EVYLLLNDL 493
++Y L D+
Sbjct: 622 DIYKALEDI 630
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 174/360 (48%), Gaps = 8/360 (2%)
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A + +G R QLHG K G ++ I N+II MY C + A +F ++ +
Sbjct: 2 ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKP-SLF 60
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WN MI G +K E+ + F +M R++VSWN++IS + + ++L F EM Q
Sbjct: 61 SWNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQG 120
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+P+ T S+L+ACA + + G+ +H +V L+ +V ++DMY KCG + +
Sbjct: 121 CQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASK 180
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
+VFNT+ + + W S++ G+A G + E +F ++ + D +L C
Sbjct: 181 RVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGET 240
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
++ + +T + S+ + + + G E+A +M + D I W ++
Sbjct: 241 NISIGEQLHGFTVKT-GMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAH-DVISWTTM 298
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM--KEVK 454
+++ GN+E A+ ++ E + + M Y + +EE ++ +LM +EV+
Sbjct: 299 ITSFSHSGNVERARDYFNRMPERN---VISWNAMLGAYCQNSFWEEGLKLYILMLRQEVR 355
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 168/395 (42%), Gaps = 70/395 (17%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
F Q+ + + WNTII FS ++ F++M + QP +TY S+ A A +
Sbjct: 81 TFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQG-CQPNSMTYASVLSACANIY 139
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ G LH R+V+ D + N ++ MYA CG + ++ +F+ + E +VV W S+I
Sbjct: 140 DFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTL-REHNVVTWTSLI 198
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G+A G + E ++F +M++ + F
Sbjct: 199 SGIAHFGSQE-------------------------------EVYDIFYQMRKDCVIMDNF 227
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC------------- 269
+ ++L C I GE +H F V + V A + MY KC
Sbjct: 228 ILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETM 287
Query: 270 ------------------GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
G ERA FN +P++ + WN+M+ N + E +KL+
Sbjct: 288 AAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYI 347
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI--KPSIKHYSCMVDALG 369
+ ++PD+I+F+ ++ AC+ ++ +K ++++ K+ + + +
Sbjct: 348 LMLRQEVRPDWITFVTMIGACS---ELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYS 404
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
R G +EEA+ L S+ + + I W S++ ++G
Sbjct: 405 RCGRIEEAQNLFDSI-QEKNLISWNSIMGGYAQNG 438
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/500 (35%), Positives = 278/500 (55%), Gaps = 36/500 (7%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
D KKIH ++K G D A+ L S G + A +F + + WN +I G+
Sbjct: 12 DGKKIHCLVLKLGFEWDVFVAAS-LVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGY 70
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
Q+ A L D + ++ +T S+ AQ+G G +H V+K GLEF+
Sbjct: 71 CQNGNAAEA-LDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFE 129
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ N +I MYA K G + ++++F ++
Sbjct: 130 LFVSNALINMYA--------------------------------KFGSLGHAQKVFGLLI 157
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ VSWN++I+GY +N EA+E++ M+E + I P++ T VS+L A + +GA++QG
Sbjct: 158 -KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGM 216
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH ++ NC + V T +IDMY KCG + A+ +F VP+K WN+M+ ++G
Sbjct: 217 RIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHG 276
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+A++LF +++ +KPD+I+F+++L+AC+HSG V+ A+ F +M E Y IKPS+KHY
Sbjct: 277 DGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHY 336
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD GRAG LE A I+ MP PDA WG+LL+ACR HGNIE+ K A++++ E+D
Sbjct: 337 GCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDS 396
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
YVL+SN+YA ++E + R L ++ + K PG S I ++ +V F G + HP
Sbjct: 397 ENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHP 456
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
K E+Y L DL I+ +G
Sbjct: 457 KCEEIYRELRDLTSKIKTIG 476
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 165/326 (50%), Gaps = 39/326 (11%)
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
P + KA L DG ++H V+K G E+D F+ ++++MY+ G + +AR +FD++
Sbjct: 1 PPVVKACGDL---LDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
D +WN+M ISGY +N EAL++ E
Sbjct: 58 R-DRGSWNAM-------------------------------ISGYCQNGNAAEALDIADE 85
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M+ + +K T+ S+L CA++G I G+ IH +++ + E V A+I+MY K G
Sbjct: 86 MRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGS 145
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLT 330
A +VF + K +S WN+++ G A NG +EAI+++ ++ + P+ +++++L
Sbjct: 146 LGHAQKVFGLLIKDVVS-WNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILP 204
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
A +H G + Q + + + + +C++D G+ G L++A L +P ++
Sbjct: 205 AYSHVGALQQGMRIHGQVIKNC-LYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPR-KNS 262
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQI 416
+ W +++S HG+ E A + +++
Sbjct: 263 VPWNAMISCYGVHGDGEKALELFREM 288
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
++ AC G + G+ IH ++ FE + V +++ MY + G A ++F+ +P +
Sbjct: 3 VVKAC---GDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
WN+M+ G NG EA+ + ++ +K D I+ +VL C G + K
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGK---- 115
Query: 347 LMTETYKIKPSIKH----YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
+ Y IK ++ + +++ + G L A+K+ + D + W +L++ +
Sbjct: 116 -LIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIK--DVVSWNTLITGYAQ 172
Query: 403 HGNIEMAKQAAKQIIELDKNE 423
+G +A +A + + ++++E
Sbjct: 173 NG---LASEAIEVYLLMEEHE 190
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/502 (36%), Positives = 276/502 (54%), Gaps = 43/502 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAG---DINYAYLVFTQIKKPNLFIW-N 56
++ L ++HA +K GLA P +R+L CT P + YA VF ++ +P+ +W N
Sbjct: 38 LRGLAQLHAAAVKAGLAAHPALVTRLLTLCTGPGAGPAHLAYARQVFDRVTQPSDAVWYN 97
Query: 57 TIIRGFSQSSTPRNA-----ILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLH 111
T++RG+++SS+ ++ + +F+ ML + P T+ SL KA A G Q H
Sbjct: 98 TLLRGYARSSSSSSSSSAAAVRVFVRMLEEG-VAPDTYTFVSLLKACAAARAGEHGRQAH 156
Query: 112 GRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
VK G ++ T+I MYA CG +AR
Sbjct: 157 AVAVKLGAAGHDYVRPTLINMYAECG---DAR---------------------------- 185
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
+R F + VS+N+MI+ VR+ + EAL LFREMQ + + P+ T++S+L+AC
Sbjct: 186 -AARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVISVLSAC 244
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A LGA++ G W+H+++ V TA++DMY KCG E A+ VF + + W+
Sbjct: 245 ALLGALQLGRWLHDYVRKLGLGSLVKVSTALVDMYAKCGSLEDAIAVFQGMESRDRQAWS 304
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
M+ A +GY EAI LF ++ +KPD I+F+ +L AC+HSG V++ YF M +
Sbjct: 305 VMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLRYFDDMKD- 363
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ I P IKHY C+ D L R+G LE A K I +P +P I+W +LLSAC HG++E+ K+
Sbjct: 364 HGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDVELGKR 423
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
++I+ELD + YV+ SNL A + +EE R LM + + K PGCS IE+D VH
Sbjct: 424 VFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCSSIEIDNTVH 483
Query: 472 EFVAGGRLHPKAPEVYLLLNDL 493
EF AG HPK+ E +++++
Sbjct: 484 EFFAGDGRHPKSQEARKMVDEV 505
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/431 (37%), Positives = 253/431 (58%), Gaps = 4/431 (0%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
+G ++ A +F +I + ++F W +I GF Q R A+LL+ M S + P +
Sbjct: 272 SGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMR-KSDLHPNEVLIVD 330
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
L A Q +G Q H +VK G FI TII YA C + A L + D
Sbjct: 331 LLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKS- 389
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+ + N MI+G K G ID++R++FD M ++ SW++MISGY +N AL+LF M
Sbjct: 390 HLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMI 449
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ ++P+E TMVS+ +A A LG + +G W H ++ LN + AIIDMY KCG +
Sbjct: 450 DSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSID 509
Query: 274 RALQVFNTVPKKG--LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
AL VF + K +S WN+++ GLAM+G+ N ++++FS LQ ++K + I+F+ VL+A
Sbjct: 510 TALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSA 569
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H+G V + YF M + ++P+IKHY C+VD LGR G L EAE+++R+MP D +
Sbjct: 570 CCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVV 629
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IWG+LL++ R HG +E+ ++AA+ + L + G VL+SNLYA + +E+A R ++
Sbjct: 630 IWGTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQ 689
Query: 452 EVKIEKEPGCS 462
++ + PG S
Sbjct: 690 SQRMIRSPGYS 700
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 186/412 (45%), Gaps = 64/412 (15%)
Query: 50 PNLFI-WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA 108
P L++ W + S P + F++ +S L+ S K A G
Sbjct: 22 PPLYLKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDCELSVVSALKYCASSSAISSGQ 81
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
Q+H V+K G + FI N++I MY CG LS ARL+FD D V+ N M+ G K
Sbjct: 82 QIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSV-LDSVSCNIMMSGYVKL 140
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
+++ +R+LF KM R VS+ +MI G +N + EA+E+F++M+ + P+E TM S++
Sbjct: 141 RQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVM 200
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC--------------------- 267
+AC+ +G I +H ++ F ++ T ++ MYC
Sbjct: 201 SACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTV 260
Query: 268 ----------KCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN 317
K G ++A ++F +P++ + W M+ G +A+ L+S ++ S+
Sbjct: 261 SWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSD 320
Query: 318 LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-------------------------- 351
L P+ + + +L+AC S + + + + +L+ +
Sbjct: 321 LHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAY 380
Query: 352 --YKI--KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
Y++ K + + M+ + G++++A ++ MP + D W +++S
Sbjct: 381 LQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMP-EKDVFSWSTMISG 431
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 192/403 (47%), Gaps = 37/403 (9%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A +F ++ + + T+I G +Q+ AI +F DM ++ + P +T S+ A +
Sbjct: 146 ARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMR-SAGVAPNEVTMASVMSACS 204
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
+G + LH V+K I +++MY L + + +F+E+ + V+WN
Sbjct: 205 HIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVR-NTVSWN 263
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
M+ G K G +D++R LF+++ R+ SW MI G+V+ + ++AL L+ M++ ++ P
Sbjct: 264 VMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHP 323
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC---------- 269
+E +V LL+AC + +I +G H+ +V N F + II Y C
Sbjct: 324 NEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQY 383
Query: 270 ---------------------GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
G ++A Q+F+ +P+K + W++M+ G A N + A+
Sbjct: 384 QMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALD 443
Query: 309 LFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS-CMVDA 367
LF G+ S ++P+ I+ ++V +A GK+ + + + K+ P + S ++D
Sbjct: 444 LFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN--KVIPLNDNLSAAIIDM 501
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAII-WGSLLSACRKHGNIEMA 409
+ G ++ A + R + + W +++ HG+ ++
Sbjct: 502 YAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLS 544
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 43/236 (18%)
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG---------- 270
E ++VS L CA AI G+ IH ++ F NT ++ ++I+MY KCG
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 271 -CP--------------------ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
C E A Q+F +P++G + +M+ GLA N EAI++
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY-----KIKPSIKHYSCM 364
F ++S+ + P+ ++ +V++AC+H G + + L+ + + I ++ H C+
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 240
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ L++ ++L MP + + W +L K G ++ A++ ++I E D
Sbjct: 241 FSS------LKDTKRLFNEMPVR-NTVSWNVMLKGYVKSGLVDQARELFERIPERD 289
>gi|125589995|gb|EAZ30345.1| hypothetical protein OsJ_14392 [Oryza sativa Japonica Group]
Length = 704
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 295/585 (50%), Gaps = 100/585 (17%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPN-------------- 51
++H ++K+G P+ + +L F +S D++ A +F + N
Sbjct: 88 QVHCQVVKSGSDDFPVVGASLLDFYSSCL-DLDAARTLFDTLHANNELLWSPMVVALVRF 146
Query: 52 ------------------LFIWNTIIRGFSQSSTPR--NAILLFIDMLVTSPIQPQRLTY 91
LF W II G+++ + ++ LF+ +L + P TY
Sbjct: 147 NLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTY 206
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN---------------- 135
S+ +A ++G G +HG +++ G E +Q I + ++ +Y
Sbjct: 207 DSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQM 266
Query: 136 ----------CGFLS-----EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
GF+S +A+L+F ++ TE D ++N MI A G +++ RR+F+
Sbjct: 267 PSLITSNTLIAGFISMGRTEDAKLVFSQM-TEHDSGSYNLMIKAYADEGRLEDCRRMFEM 325
Query: 181 MV--------------------------------SRNTVSWNSMISGYVRNVKFKEALEL 208
M RNTV+WNSMISGYV+N + EAL+L
Sbjct: 326 MPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKL 385
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
F M +I+ S T +LL+ACA +G I QG+ +H L FE N V TA++DMY K
Sbjct: 386 FAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSK 445
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CGC A F+ + ++ W S++ GLA NG+ EAI F+ + +N+KP+ I+F+ +
Sbjct: 446 CGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGI 505
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L A +G VN+ +F M E+Y + P+++HY+C VD LGRA + EAEK I MP
Sbjct: 506 LMASARAGLVNKGMRFFHSM-ESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPA 564
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D ++WG+LL+AC ++EM ++ A+++ + YV MSN+YA ++E+ ++ R
Sbjct: 565 DGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKVRT 624
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
++ + +KEPGCS IEV VH F+ R HP+ E+YL+L DL
Sbjct: 625 RLRSINAKKEPGCSWIEVKDMVHVFLVEDRNHPEREEIYLMLEDL 669
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 174/349 (49%), Gaps = 15/349 (4%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
WN + ++ R+A+ M S TY S A A+ R G Q+H +V
Sbjct: 35 WNATVAAHARRGRVRDALGTAARMH-RSAAGLDEATYASALGACARGRCLRMGWQVHCQV 93
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
VK G + + +++ Y++C L AR +FD + +++ W+ M++ L + + ++
Sbjct: 94 VKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELL-WSPMVVALVRFNLLSDA 152
Query: 175 RRLFDKMV-SRNTVSWNSMISGYVR--NVKFKEALELFREM-QEQNIKPSEFTMVSLLNA 230
L +M SR+ +W ++ISGY R N ++LELF ++ E + P+EFT S+L A
Sbjct: 153 LDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRA 212
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
C K+GA+ G IH L+ + FE ++ +A++D+YC+ G + A+ V+N + L
Sbjct: 213 CVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQMPSLITS 272
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N+++ G G +A +FS + + D S+ ++ A G++ + F +M
Sbjct: 273 NTLIAGFISMGRTEDAKLVFSQMT----EHDSGSYNLMIKAYADEGRLEDCRRMFEMMP- 327
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ ++ + M+ L + G LEE KL + + + + W S++S
Sbjct: 328 ----RRNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISG 372
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 42/292 (14%)
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
+SWN+ ++ + R + ++AL M E T S L ACA+ +R G +H
Sbjct: 33 LSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACARGRCLRMGWQVHCQ 92
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV------------------------ 282
+V + + +V +++D Y C + A +F+T+
Sbjct: 93 VVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPMVVALVRFNLLSDA 152
Query: 283 --------PKKGLSCWNSMVFGLA--MNGYENEAIKLFSGLQSSN-LKPDYISFIAVLTA 331
P + L W +++ G A N Y ++++LF L + + + P+ ++ +VL A
Sbjct: 153 LDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTYDSVLRA 212
Query: 332 CNHSGKVNQAKD-YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
C G + + + L+ ++ + I S +VD R+G +++A + + P
Sbjct: 213 CVKMGALEFGRSIHGCLIQSGFESEQLIT--SALVDLYCRSGAVDDAVMVYNGLQM-PSL 269
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEE 442
I +L++ G E AK Q+ E D S Y LM YA + E+
Sbjct: 270 ITSNTLIAGFISMGRTEDAKLVFSQMTEHD---SGSYNLMIKAYADEGRLED 318
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +HA L KT + + ++ S G ++ A F+ I PN+ W ++I G +Q
Sbjct: 418 KMVHALLCKTPFESNGYVGTALVDM-YSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQ 476
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ AI+ F ML + ++P +T+ + A A+ GL G + + G+
Sbjct: 477 NGHWMEAIVQFARMLKNN-VKPNEITFLGILMASARAGLVNKGMRFFHSMESYGVVPTVE 535
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK---M 181
+ + + + EA ++ D V W +++ +++ ++ +K M
Sbjct: 536 HYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYM 595
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
+++ ++ +M + Y + K+++ +++ ++ N K
Sbjct: 596 GTKHISAYVAMSNIYAKLGKWEDVVKVRTRLRSINAK 632
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 275/471 (58%), Gaps = 15/471 (3%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTY 91
AG +N A +F ++ ++ W ++ G+ Q+ A LF +M P+R +++
Sbjct: 156 AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM-------PKRNVVSW 208
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
++ YAQ G L ++ + E ++ ++ Y G + +A +F+ +
Sbjct: 209 TAMISGYAQNG----EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAM-P 263
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
E V A N+M++G + G +D ++ +F+KM R+ +W++MI Y +N EAL FRE
Sbjct: 264 EHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFRE 323
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + ++P+ +++S+L CA L + G +H ++ F+++ V+A+I MY KCG
Sbjct: 324 MLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGN 383
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
++A +VF+T K + WNSM+ G A +G +A+ +F ++ + + PD I++I LTA
Sbjct: 384 LDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTA 443
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C+++GKV + ++ F MT I+P +HYSCMVD LGR+GL+EEA LI++MP +PDA+
Sbjct: 444 CSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAV 503
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IWG+L+ ACR H N E+A+ AAK+++EL+ + YVL+S++Y + ++E+A + R +
Sbjct: 504 IWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFIS 563
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRL-HPKAPEVYLLLNDLGLLIQEMG 501
+ K PGCS IE D VH F +G L HP+ + +L L L+ E G
Sbjct: 564 SRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESG 614
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 177/416 (42%), Gaps = 67/416 (16%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM---------LVTSPI 84
AG+I A F + +N ++ G+ ++ P A+ LF M + S +
Sbjct: 30 AGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGL 89
Query: 85 QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL 144
+R T P A A + +++ Y G L++A
Sbjct: 90 SLRRQTLPDAAAALASIPFPPSVVSF----------------TSLLRGYVRHGLLADAIR 133
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+F ++ E + V++ ++ GL G ++E+RRLFD+M R+ V+W +M+SGY + + E
Sbjct: 134 LFQQM-PERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITE 192
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
A LF EM ++N+ + ++++ A+ G + + + E N + TA++
Sbjct: 193 ARALFDEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLV 244
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG----------------------- 301
Y + G E A ++FN +P+ ++ N+M+ G G
Sbjct: 245 GYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAM 304
Query: 302 ---YEN-----EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
YE EA+ F + ++P+Y S I++LT C ++ ++ M
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC-S 363
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ S ++ + G L++A+++ + D ++W S+++ +HG E A
Sbjct: 364 FDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHGLGEQA 418
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 51/295 (17%)
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI- 217
N+ I LA+ G I+ +R F+ M R T S+N++++GY RN AL LFR M +++
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 218 ----------------------------KPSEFTMVSLLNACAKLG----AIRQGEWIHN 245
PS + SLL + G AIR
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIR------- 133
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
L E N + T ++ G A ++F+ +P + + W +M+ G G E
Sbjct: 134 -LFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITE 192
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A LF + N+ +S+ A+++ +G+VN A+ F +M E ++ ++ M+
Sbjct: 193 ARALFDEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAML 243
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+AG +E+A +L +MP P A +++ + G ++ AK +++ E D
Sbjct: 244 VGYIQAGHVEDAAELFNAMPEHPVAAC-NAMMVGFGQRGMVDAAKTVFEKMCERD 297
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 130/308 (42%), Gaps = 37/308 (12%)
Query: 15 GLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILL 74
+ + P+AA + G ++ A VF ++ + + W+ +I+ + Q+ A+
Sbjct: 261 AMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALST 320
Query: 75 FIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYA 134
F +ML ++P + S+ A L + G ++H +++ + D F + +I MY
Sbjct: 321 FREMLWRG-VRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYI 379
Query: 135 NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMIS 194
CG L +A+ +F + + D+V WNSMI G A+ G
Sbjct: 380 KCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHG------------------------- 413
Query: 195 GYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN-CFE 253
++AL +F +M+ + P T + L AC+ G +++G I N + N
Sbjct: 414 ------LGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIR 467
Query: 254 LNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
+ ++D+ + G E A + +P + W +++ M + N I F+
Sbjct: 468 PGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRM--HRNAEIAEFAA 525
Query: 313 LQSSNLKP 320
+ L+P
Sbjct: 526 KKLLELEP 533
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 276/465 (59%), Gaps = 11/465 (2%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
++ A +F ++ + WN +I G++Q+ A LF ++ PI+ + ++
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL----PIRDV-FAWTAMVS 285
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
+ Q G+ + R+ ++ E ++ N +I Y + +AR +FD++ + +
Sbjct: 286 GFVQNGMLDEAT----RIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR-NTS 340
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WN+M+ G A+CG ID+++ LFD+M R+ +SW +MISGY ++ + +EAL LF +M+
Sbjct: 341 SWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDG 400
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+ + L++CA++ A+ G+ +H LV F+ I A++ MY KCG E A
Sbjct: 401 GILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAF 460
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
VF + +K + WN+M+ G A +G+ EA+ LF ++ + +KPD ++ + VL+AC+H+G
Sbjct: 461 DVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTG 519
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
V++ +YF M + Y I + KHY+CM+D LGRAG L+EA L++SMP PDA WG+L
Sbjct: 520 LVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGAL 579
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
L A R HG+ E+ ++AA+++ E++ + S YVL+SNLYAAS ++ E E R M++ ++
Sbjct: 580 LGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVK 639
Query: 457 KEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
K PG S +E+ + H F G HP+A +Y L +L L +++ G
Sbjct: 640 KVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDG 684
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 221/508 (43%), Gaps = 76/508 (14%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G+++ A +F Q+ + ++ WN ++ GF+Q+ A +F MLV + I ++ L
Sbjct: 136 GNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEI-----SWNGL 190
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
AY Q G D R+ ++++ N ++ Y L +AR +FD + D
Sbjct: 191 LSAYVQNGRIEDAR----RLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-D 245
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
++WN MI G A+ G + E+RRLF+++ R+ +W +M+SG+V+N EA +F EM E
Sbjct: 246 KISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+N E + +++ + I + + + + + NT ++ Y +CG ++
Sbjct: 306 KN----EVSWNAMIAGYVQSQQIEKARELFDQMPSR----NTSSWNTMVTGYAQCGNIDQ 357
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLF------------------------ 310
A +F+ +P++ W +M+ G A +G EA+ LF
Sbjct: 358 AKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAE 417
Query: 311 -----------SGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
L + + YI+ A+L G + +A D F +TE I
Sbjct: 418 IAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE-----KDIV 472
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPS--DPDAIIWGSLLSACRKHGNIEMAKQ---AAK 414
++ M+ R G +EA L SM PD + +LSAC G ++ + +
Sbjct: 473 SWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMY 532
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP-------GCSLIEVD 467
Q + N Y M +L + + +EA+ LMK + + G S I D
Sbjct: 533 QNYGITANAK-HYTCMIDLLGRAGRLDEALN---LMKSMPFYPDAATWGALLGASRIHGD 588
Query: 468 GEVHEFVAGG--RLHPKAPEVYLLLNDL 493
E+ E A + P +Y+LL++L
Sbjct: 589 TELGEKAAEKVFEMEPDNSGMYVLLSNL 616
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 169/365 (46%), Gaps = 28/365 (7%)
Query: 45 TQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLA 104
+ I ++ WN I + + +A+ +F M S + TY ++ Y L+
Sbjct: 53 STIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTV-----TYNAMISGY----LS 103
Query: 105 RDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG 164
+ +V ++ + D N ++ Y G LS AR +F+++ E DVV+WN+M+ G
Sbjct: 104 NNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM-PEKDVVSWNAMLSG 162
Query: 165 LAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
A+ G ++E+R++FD+M+ +N +SWN ++S YV+N + ++A LF + I M
Sbjct: 163 FAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLM 222
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
+ +L R L + I +I Y + G A ++F +P
Sbjct: 223 GGYVRK-KRLDDARS-------LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPI 274
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
+ + W +MV G NG +EA ++F + N +S+ A++ S ++ +A++
Sbjct: 275 RDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN----EVSWNAMIAGYVQSQQIEKAREL 330
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
F M + ++ MV + G +++A+ L MP D I W +++S + G
Sbjct: 331 FDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQ-RDCISWAAMISGYAQSG 384
Query: 405 NIEMA 409
E A
Sbjct: 385 QSEEA 389
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 49/265 (18%)
Query: 147 DEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEAL 206
D + D+V WN I + G+ + + +F+ M R+TV++N+MISGY+ N KF A
Sbjct: 52 DSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCAR 111
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
++F +M ++++ I ++ Y
Sbjct: 112 KVFEKMPDRDL---------------------------------------ISWNVMLSGY 132
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
K G A +FN +P+K + WN+M+ G A NG+ EA K+F + L + IS+
Sbjct: 133 VKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWN 188
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+L+A +G++ A+ F K+ I ++C++ R L++A L MP
Sbjct: 189 GLLSAYVQNGRIEDARRLF-----DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPV 243
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQ 411
D I W +++ ++G + A++
Sbjct: 244 -RDKISWNIMITGYAQNGLLSEARR 267
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H L+K G IA + +LA G I A+ VF I + ++ WNT+I G+++
Sbjct: 425 KQLHGRLVKAGFQTGYIAGNALLAM-YGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQ 123
+ A+ LF M +T I+P +T + A + GL G + + + G+ +
Sbjct: 484 HGFGKEALALFESMKMT--IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANA 541
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN-----SMIIGLAKCGEIDESRRLF 178
+ +I + G L EA + + D W S I G + GE + ++F
Sbjct: 542 KHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGE-KAAEKVF 600
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
+ M N+ + + + Y + +++E E+ +M+++ +K
Sbjct: 601 E-MEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVK 639
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 275/471 (58%), Gaps = 15/471 (3%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTY 91
AG +N A +F ++ ++ W ++ G+ Q+ A LF +M P+R +++
Sbjct: 156 AGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM-------PKRNVVSW 208
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
++ YAQ G L ++ + E ++ ++ Y G + +A +F+ +
Sbjct: 209 TAMISGYAQNG----EVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAM-P 263
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
E V A N+M++G + G +D ++ +F+KM R+ +W++MI Y +N EAL FRE
Sbjct: 264 EHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFRE 323
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + ++P+ +++S+L CA L + G +H ++ F+++ V+A+I MY KCG
Sbjct: 324 MLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGN 383
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
++A +VF+T K + WNSM+ G A +G +A+ +F ++ + + PD I++I LTA
Sbjct: 384 LDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTA 443
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C+++GKV + ++ F MT I+P +HYSCMVD LGR+GL+EEA LI++MP +PDA+
Sbjct: 444 CSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAV 503
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IWG+L+ ACR H N E+A+ AAK+++EL+ + YVL+S++Y + ++E+A + R +
Sbjct: 504 IWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFIS 563
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRL-HPKAPEVYLLLNDLGLLIQEMG 501
+ K PGCS IE D VH F +G L HP+ + +L L L+ E G
Sbjct: 564 SRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESG 614
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 177/416 (42%), Gaps = 67/416 (16%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM---------LVTSPI 84
AG+I A F + +N ++ G+ ++ P A+ LF M + S +
Sbjct: 30 AGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALISGL 89
Query: 85 QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARL 144
+R T P A A + +++ Y G L++A
Sbjct: 90 SLRRQTLPDAAAALASIPFPPSVVSF----------------TSLLRGYVRHGLLADAIR 133
Query: 145 MFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKE 204
+F ++ E + V++ ++ GL G ++E+RRLFD+M R+ V+W +M+SGY + + E
Sbjct: 134 LFQQM-PERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITE 192
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
A LF EM ++N+ + ++++ A+ G + + + E N + TA++
Sbjct: 193 ARALFDEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMP----ERNEVSWTAMLV 244
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG----------------------- 301
Y + G E A ++FN +P+ ++ N+M+ G G
Sbjct: 245 GYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAM 304
Query: 302 ---YEN-----EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
YE EA+ F + ++P+Y S I++LT C ++ ++ M
Sbjct: 305 IKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC-S 363
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ S ++ + G L++A+++ + D ++W S+++ +HG E A
Sbjct: 364 FDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHGLGEQA 418
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 129/295 (43%), Gaps = 51/295 (17%)
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI- 217
N+ I LA+ G I+ +R F+ M R T S+N++++GY RN AL LFR M +++
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 218 ----------------------------KPSEFTMVSLLNACAKLG----AIRQGEWIHN 245
PS + SLL + G AIR
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIR------- 133
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
L E N + T ++ G A ++F+ +P + + W +M+ G G E
Sbjct: 134 -LFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITE 192
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A LF + N+ +S+ A+++ +G+VN A+ F +M E ++ ++ M+
Sbjct: 193 ARALFDEMPKRNV----VSWTAMISGYAQNGEVNLARKLFEVMPERNEVS-----WTAML 243
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+AG +E+A +L +MP P A +++ + G ++ AK +++ E D
Sbjct: 244 VGYIQAGHVEDAAELFNAMPEHPVAAC-NAMMVGFGQRGMVDAAKTVFEKMRERD 297
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 34/270 (12%)
Query: 15 GLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILL 74
+ + P+AA + G ++ A VF ++++ + W+ +I+ + Q+ A+
Sbjct: 261 AMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALST 320
Query: 75 FIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYA 134
F +ML ++P + S+ A L + G ++H +++ + D F + +I MY
Sbjct: 321 FREMLWRG-VRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYI 379
Query: 135 NCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMIS 194
CG L +A+ +F + + D+V WNSMI G A+ G
Sbjct: 380 KCGNLDKAKRVFHTFEPK-DIVMWNSMITGYAQHG------------------------- 413
Query: 195 GYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN-CFE 253
++AL +F +M+ + P T + L AC+ G +++G I N + N
Sbjct: 414 ------LGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIR 467
Query: 254 LNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
+ ++D+ + G E A + +P
Sbjct: 468 PGAEHYSCMVDLLGRSGLVEEAFDLIKNMP 497
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 276/465 (59%), Gaps = 11/465 (2%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
++ A +F ++ + WN +I G++Q+ A LF ++ PI+ + ++
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL----PIRDV-FAWTAMVS 285
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
+ Q G+ + R+ ++ E ++ N +I Y + +AR +FD++ + +
Sbjct: 286 GFVQNGMLDEAT----RIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR-NTS 340
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WN+M+ G A+CG ID+++ LFD+M R+ +SW +MISGY ++ + +EAL LF +M+
Sbjct: 341 SWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDG 400
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+ + L++CA++ A+ G+ +H LV F+ I A++ MY KCG E A
Sbjct: 401 GILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAF 460
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
VF + +K + WN+M+ G A +G+ EA+ LF ++ + +KPD ++ + VL+AC+H+G
Sbjct: 461 DVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTG 519
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
V++ +YF M + Y I + KHY+CM+D LGRAG L+EA L++SMP PDA WG+L
Sbjct: 520 FVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGAL 579
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
L A R HG+ E+ ++AA+++ E++ + S YVL+SNLYAAS ++ E E R M++ ++
Sbjct: 580 LGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVK 639
Query: 457 KEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
K PG S +E+ + H F G HP+A +Y L +L L +++ G
Sbjct: 640 KVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDG 684
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 221/508 (43%), Gaps = 76/508 (14%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G+++ A +F Q+ + ++ WN ++ GF+Q+ A +F MLV + I ++ L
Sbjct: 136 GNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEI-----SWNGL 190
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
AY Q G D R+ ++++ N ++ Y L +AR +FD + D
Sbjct: 191 LSAYVQNGRIEDAR----RLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR-D 245
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
++WN MI G A+ G + E+RRLF+++ R+ +W +M+SG+V+N EA +F EM E
Sbjct: 246 KISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPE 305
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+N E + +++ + I + + + + + NT ++ Y +CG ++
Sbjct: 306 KN----EVSWNAMIAGYVQSQQIEKARELFDQMPSR----NTSSWNTMVTGYAQCGNIDQ 357
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLF------------------------ 310
A +F+ +P++ W +M+ G A +G EA+ LF
Sbjct: 358 AKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAE 417
Query: 311 -----------SGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
L + + YI+ A+L G + +A D F +TE I
Sbjct: 418 IAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITE-----KDIV 472
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPS--DPDAIIWGSLLSACRKHGNIEMAKQ---AAK 414
++ M+ R G +EA L SM PD + +LSAC G ++ + +
Sbjct: 473 SWNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMY 532
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP-------GCSLIEVD 467
Q + N Y M +L + + +EA+ LMK + + G S I D
Sbjct: 533 QNYGITANAK-HYTCMIDLLGRAGRLDEALN---LMKSMPFYPDAATWGALLGASRIHGD 588
Query: 468 GEVHEFVAGG--RLHPKAPEVYLLLNDL 493
E+ E A + P +Y+LL++L
Sbjct: 589 TELGEKAAEKVFEMEPDNSGMYVLLSNL 616
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 169/365 (46%), Gaps = 28/365 (7%)
Query: 45 TQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLA 104
+ I ++ WN I + + +A+ +F M S + TY ++ Y L+
Sbjct: 53 STIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTV-----TYNAMISGY----LS 103
Query: 105 RDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG 164
+ +V ++ + D N ++ Y G LS AR +F+++ E DVV+WN+M+ G
Sbjct: 104 NNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM-PEKDVVSWNAMLSG 162
Query: 165 LAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
A+ G ++E+R++FD+M+ +N +SWN ++S YV+N + ++A LF + I M
Sbjct: 163 FAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLM 222
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
+ +L R L + I +I Y + G A ++F +P
Sbjct: 223 GGYVRK-KRLDDARS-------LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPI 274
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
+ + W +MV G NG +EA ++F + N +S+ A++ S ++ +A++
Sbjct: 275 RDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN----EVSWNAMIAGYVQSQQIEKAREL 330
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
F M + ++ MV + G +++A+ L MP D I W +++S + G
Sbjct: 331 FDQMPSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQ-RDCISWAAMISGYAQSG 384
Query: 405 NIEMA 409
E A
Sbjct: 385 QSEEA 389
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 49/265 (18%)
Query: 147 DEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEAL 206
D + D+V WN I + G+ + + +F+ M R+TV++N+MISGY+ N KF A
Sbjct: 52 DSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCAR 111
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
++F +M ++++ I ++ Y
Sbjct: 112 KVFEKMPDRDL---------------------------------------ISWNVMLSGY 132
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
K G A +FN +P+K + WN+M+ G A NG+ EA K+F + L + IS+
Sbjct: 133 VKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWN 188
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+L+A +G++ A+ F K+ I ++C++ R L++A L MP
Sbjct: 189 GLLSAYVQNGRIEDARRLF-----DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPV 243
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQ 411
D I W +++ ++G + A++
Sbjct: 244 -RDKISWNIMITGYAQNGLLSEARR 267
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 11/220 (5%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H L+K G IA + +LA G I A+ VF I + ++ WNT+I G+++
Sbjct: 425 KQLHGRLVKAGFQTGYIAGNALLAM-YGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQ 123
+ A+ LF M +T I+P +T + A + G G + + + G+ +
Sbjct: 484 HGFGKEALALFESMKMT--IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANA 541
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN-----SMIIGLAKCGEIDESRRLF 178
+ +I + G L EA + + D W S I G + GE + ++F
Sbjct: 542 KHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGE-KAAEKVF 600
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
+ M N+ + + + Y + +++E E+ +M+++ +K
Sbjct: 601 E-MEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVK 639
>gi|326504712|dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 658
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 257/427 (60%), Gaps = 6/427 (1%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
AG + A VF +I + + W TII G+ ++ A+ ++ M+ +
Sbjct: 223 AGMLPMAAEVFGRIPERDAVSWLTIIDGYIRADCTSEALRAYVAMMAEVDTRGNAALLVD 282
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
L K A+ +G QLH ++K G + F+ T+I+ Y +C L AR+ F D
Sbjct: 283 LIKVCARHAAVLEGQQLHTVILKDGFDAHPFVQATLIHFYGSCDLLDIARMQFKLSDKSH 342
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+ +WN+++ GL + E+R+LFD M R+T+SW++++SGYV++ +AL+LF M
Sbjct: 343 -IASWNALMSGLLHRNLMHEARQLFDDMPERDTISWSTLLSGYVQSGHSNKALQLFYLML 401
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
++P++ T+ S L+A A G + QG +IH+++++N +L + +IDMY KCG
Sbjct: 402 GAGVEPNDVTLASTLSAVADSGMLEQGRFIHDYIISNSIQLTDNLSAGLIDMYAKCGSVA 461
Query: 274 RALQVFNTVPKK--GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A+Q+F+ V K +S WN+++ LA++G+ + +++LF LQ +N+KP+ +++I VL A
Sbjct: 462 DAIQLFSHVKHKLSSVSPWNAIICSLAIHGHAHTSLELFLELQRTNIKPNSVTYIGVLNA 521
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H+G V + + +F M+ Y I+P+IKHY CMVD LGRAG LEEAE LI+ MP D +
Sbjct: 522 CCHAGLVTEGRHHFESMSREYGIQPTIKHYGCMVDLLGRAGHLEEAENLIQMMPMRSDVV 581
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IWGS+L+A R HGN+ + ++AA+++ ++D N V +SN++A + ++ L+ K
Sbjct: 582 IWGSILAAARTHGNVALGEKAAEELAKIDPNHGASKVALSNIFAEAARWNNV---SLVRK 638
Query: 452 EVKIEKE 458
E++ E E
Sbjct: 639 ELQDEDE 645
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 170/388 (43%), Gaps = 75/388 (19%)
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQFIHNTIIYMYANCGFLSE---ARLMFDE 148
S K+ A+L R G QLH K GL + F+ N+++ YA AR +FDE
Sbjct: 14 SSLKSGARL---RHGEQLHALAAKSGLLASNTFVRNSLLAFYARLPSPQAPALARHLFDE 70
Query: 149 VDTEF-DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
+ D A N+++ LA+ G +D ++ + +M R+TVS+ ++++ R ++A+
Sbjct: 71 IPLALRDPAAHNTLLASLARAGRLDLAQGMLAEMPQRDTVSYTTVLTALARAGHAEDAVA 130
Query: 208 LFREMQEQNIKPSEFTMVSLLNACA------KLG-----AIRQGEWIHNFLV--TN---- 250
+FR M Q++ P+E T+ +L A A +G +R+G ++ FL+ TN
Sbjct: 131 VFRGMLAQDVPPNEVTLAGVLTALALERPPVPVGVAHGVTVRRG--LNGFLIVATNLVHA 188
Query: 251 -------CF---------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
CF + NT+ A+++ Y K G A +VF +P++ W +++
Sbjct: 189 YAAASQVCFAREIFEQMPDKNTVTWNAMLNGYLKAGMLPMAAEVFGRIPERDAVSWLTII 248
Query: 295 FGLAMNGYENEAIKLFSGLQSS-NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE--- 350
G +EA++ + + + + + + + ++ C V + + T++ +
Sbjct: 249 DGYIRADCTSEALRAYVAMMAEVDTRGNAALLVDLIKVCARHAAVLEGQQLHTVILKDGF 308
Query: 351 -------------------------TYKI--KPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+K+ K I ++ ++ L L+ EA +L
Sbjct: 309 DAHPFVQATLIHFYGSCDLLDIARMQFKLSDKSHIASWNALMSGLLHRNLMHEARQLFDD 368
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
MP + D I W +LLS + G+ A Q
Sbjct: 369 MP-ERDTISWSTLLSGYVQSGHSNKALQ 395
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/479 (35%), Positives = 277/479 (57%), Gaps = 12/479 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++ + LI +GL+ ++L FCT +++YA +F + PN ++ ++
Sbjct: 37 LNHLKQVQSFLIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLT 96
Query: 61 GFSQSSTP---RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
G+S SS P +A F M+ S +P YP + K+ L A +H + K
Sbjct: 97 GYS-SSLPLHASSAFSFFRLMVNRSFPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKS 155
Query: 118 GLEFDQFIHNTIIYMYAN-CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G + +++ YA+ ++ AR +FDE+ +E +VV+W +M+ G A+ G+I +
Sbjct: 156 GFHLYVVVQTALLHSYASSVSHITLARQLFDEM-SERNVVSWTAMLSGYARSGDIFNAVA 214
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLG 235
LF++M R+ SWN++++ +N F EA+ LFR M + I+P+E T+V +L+ACA+ G
Sbjct: 215 LFEEMPERDVPSWNAILAACTQNGLFVEAVSLFRRMINDPCIRPNEVTLVCVLSACAQTG 274
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
++ + IH F + V +++D+Y KCG E A VF KK L+ WNSM+
Sbjct: 275 TLQLAKGIHAFAYRRNLSSDVFVSNSLVDLYGKCGNLEEASSVFKMSSKKSLTAWNSMIN 334
Query: 296 GLAMNGYENEAIKLFSG---LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
A++G EAI +F L S ++KPD+I+FI +L AC H G V++ + YF LM + +
Sbjct: 335 CFALHGRSEEAIAVFEDMMKLNSHDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMKKRF 394
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
I+P I+HY C++D LGRAG +EA + + +M + D IWGSLL+AC+K+G++++A+ A
Sbjct: 395 GIEPRIEHYGCLIDLLGRAGQFDEALETMSTMKMEADEAIWGSLLNACKKYGHLDLAEVA 454
Query: 413 AKQIIELDKNESCGYV-LMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
K ++ L+ N GYV +M+NLY +EEA R ++K K PG S IE+D ++
Sbjct: 455 VKNLVALNPNNG-GYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSQIEIDNKL 512
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/530 (31%), Positives = 284/530 (53%), Gaps = 38/530 (7%)
Query: 8 HAHLIKTGLA---KDP---IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
H I +A +DP IA L + G I+ A ++F QI +P + WN +I G
Sbjct: 303 HGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITG 362
Query: 62 FSQSSTPRNAILLFIDM------------------------------LVTSPIQPQRLTY 91
+ Q+ A LF M L S + P +
Sbjct: 363 YMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSL 422
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
S+F A + + G Q+H VK G +F+ F N +I MY C + AR +F + T
Sbjct: 423 TSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVT 482
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ D+V+WNS + L + +DE+R FD M+SR+ VSW ++IS Y + EA+ F+
Sbjct: 483 K-DIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKT 541
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M ++ P+ + LL C LGA + G+ IH + + IV A+I MY KCGC
Sbjct: 542 MFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC 601
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ + ++F+ + ++ + WN+++ G A +G EAIK++ ++S+ + P+ ++F+ +L A
Sbjct: 602 AD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNA 660
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C+H+G V++ +F M++ Y + P +HY+CMVD LGR G ++ AE+ I MP +PD +
Sbjct: 661 CSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV 720
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IW +LL AC+ H N E+ K+AA+++ ++ + + YV++SN+Y++ + E E R +MK
Sbjct: 721 IWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMK 780
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ + KEPGCS ++ ++H FV G + H + E+ L +L L++ G
Sbjct: 781 QQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATG 830
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 181/380 (47%), Gaps = 29/380 (7%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A VF + + ++ WN++I + + P A L+ D + ++ T L
Sbjct: 48 GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-DAISGGNMR----TGAIL 102
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
Y +LG + RV LE + N +I Y G ++ AR +FD + + D
Sbjct: 103 LSGYGRLGRVLEAR----RVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR-D 157
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V +WNSM+ G ++ ++R LF+KM RN VSW MISGY R +A ++F +M
Sbjct: 158 VSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR 217
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK-CGCPE 273
+ + P + S L+A LG + E + + FE + ++ TAI+++Y + +
Sbjct: 218 EGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLD 277
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI----AVL 329
A++ F ++ ++ W++M+ L+ G + AI ++ + D + I A++
Sbjct: 278 TAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY--------ERDPVKSIACRTALI 329
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
T G+++ A+ F + E P + ++ ++ + G++ EA++L MP +
Sbjct: 330 TGLAQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPF-RN 383
Query: 390 AIIWGSLLSACRKHGNIEMA 409
I W +++ ++G E A
Sbjct: 384 TISWAGMIAGYAQNGRSEEA 403
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 195/494 (39%), Gaps = 98/494 (19%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ + A + G+ + A + C GDI A +F + ++ WN+++ G+
Sbjct: 111 RVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCH 170
Query: 65 SSTPRNAILLFIDM----LVTSPIQ--------------------------PQRLTYPSL 94
S +A LF M LV+ + P + + S
Sbjct: 171 SLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASA 230
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A LG L +K G E D I I+ +Y+ + + + F E E +
Sbjct: 231 LSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERN 290
Query: 155 VVAWNSM-------------------------------IIGLAKCGEIDESR-------- 175
W++M I GLA+CG ID++R
Sbjct: 291 EYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPE 350
Query: 176 -----------------------RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
LFDKM RNT+SW MI+GY +N + +EAL L +E+
Sbjct: 351 PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQEL 410
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+ PS ++ S+ AC+ + A+ G +H+ V + N+ A+I MY KC
Sbjct: 411 HRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNM 470
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
E A QVF+ + K + WNS + L N +EA F + L D +S+ +++A
Sbjct: 471 EYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAY 526
Query: 333 NHSGKVNQAKDYFTLMTETYKI--KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
H+ + N+A F M +++ P + + +LG + + ++ + + D +
Sbjct: 527 AHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSEL 586
Query: 391 IIWGSLLSACRKHG 404
I+ +L+S K G
Sbjct: 587 IVANALISMYFKCG 600
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 143 RLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKF 202
R E +V ++ I L + G + E+R +FD M R+ ++WNSMIS Y N
Sbjct: 22 RFAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMP 81
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAI 262
A +L+ + N++ T LL+ +LG + + + + ++ E NT+ A+
Sbjct: 82 DAARDLYDAISGGNMR----TGAILLSGYGRLGRVLEARRVFDGML----ERNTVAWNAM 133
Query: 263 IDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG-------------------------- 296
I Y + G A ++F+ +P + +S WNSM+ G
Sbjct: 134 ISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWT 193
Query: 297 LAMNGY-----ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+ ++GY +A +F + L PD +F + L+A G ++ + L +T
Sbjct: 194 VMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKT 253
Query: 352 YKIKPSIKHYSCMVDALGR-AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
+ + + +++ R +L+ A K SM + + W ++++A G I+
Sbjct: 254 -GFERDVVIGTAILNVYSRDTSVLDTAIKFFESMI-ERNEYTWSTMIAALSHGGRID--- 308
Query: 411 QAAKQIIELD--KNESCGYVLMSNL 433
AA + E D K+ +C L++ L
Sbjct: 309 -AAIAVYERDPVKSIACRTALITGL 332
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/496 (37%), Positives = 282/496 (56%), Gaps = 35/496 (7%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH ++IK GL + + S L + G++ A VF Q+ ++ WN+II + Q+
Sbjct: 295 IHLYVIKHGLEFE-LFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQND 353
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
P A F M + ++P LT SL AQ ++ +HG ++++G
Sbjct: 354 DPVTARGFFFKMQLNG-LEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRG-------- 404
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+L EA VV N+++ AK G ID + ++F+ + ++
Sbjct: 405 -----------WLMEA------------VVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDV 441
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSWN++ISGY +N EA+E++R M+E + IK ++ T VS+L A A +GA++QG IH
Sbjct: 442 VSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHG 501
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
L+ L+ V T +ID+Y KCG A+ +F VP++ WN+++ ++G+ +
Sbjct: 502 HLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEK 561
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+KLF +Q +KPD+++FI++L+AC+HSG V++ K +F LM E Y IKPS+KHY CMV
Sbjct: 562 ALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMV 620
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAG LE A I+ MP PDA IWG+LL ACR HGNIE+ K A+ ++ E+D
Sbjct: 621 DLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVG 680
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL+SN+YA ++E + R L +E ++K PG S IEV+ V F G + HPK E
Sbjct: 681 YYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKE 740
Query: 486 VYLLLNDLGLLIQEMG 501
+Y L L ++ +G
Sbjct: 741 IYAELRILTAKMKSLG 756
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 192/400 (48%), Gaps = 37/400 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA L+ +G + + R++ S GD++ + F QI++ +++ WN++I + +
Sbjct: 93 KRLHALLVVSGKIQSNFISIRLVNLYAS-LGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ R AI F +L+ + Q T+P + KA L DG ++H V K G ++D F
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTL---VDGRKIHCWVFKLGFQWDVF 208
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++I+MY+ GF +G+A R LFD M R
Sbjct: 209 VAASLIHMYSRFGF------------------------VGIA--------RSLFDDMPFR 236
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ SWN+MISG ++N +AL++ EM+ + I T+ S+L CA+LG I IH
Sbjct: 237 DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIH 296
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+++ + E V A+I+MY K G A +VF + + + WNS++ N
Sbjct: 297 LYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPV 356
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A F +Q + L+PD ++ +++ + S ++ + + ++ + +
Sbjct: 357 TARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAV 416
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+D + G+++ A K+ +P D + W +L+S ++G
Sbjct: 417 MDMYAKLGVIDSAHKVFNLIPV-KDVVSWNTLISGYTQNG 455
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 228/493 (46%), Gaps = 49/493 (9%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
D +KIH + K G D A+ ++ S G + A +F + ++ WN +I G
Sbjct: 190 DGRKIHCWVFKLGFQWDVFVAASLIHM-YSRFGFVGIARSLFDDMPFRDMGSWNAMISGL 248
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
Q+ A L +D + I +T S+ AQLG +H V+K GLEF+
Sbjct: 249 IQNGNAAQA-LDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFE 307
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
F+ N +I MYA G L +A+ +F ++ DVV+W
Sbjct: 308 LFVSNALINMYAKFGNLGDAQKVFQQMFLR-DVVSW------------------------ 342
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
NS+I+ Y +N A F +MQ ++P T+VSL + A+ +
Sbjct: 343 -------NSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRS 395
Query: 243 IHNFLVTNCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H F++ + + +V+ A++DMY K G + A +VFN +P K + WN+++ G NG
Sbjct: 396 VHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNG 455
Query: 302 YENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
+EAI+++ ++ +K + +++++L A H G + Q + +T + +
Sbjct: 456 LASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKT-NLHLDVFV 514
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI-IEL 419
+C++D G+ G L +A L +P + ++ W +++S HG+ E A + +++ E
Sbjct: 515 GTCLIDLYGKCGRLVDAMCLFYQVPRES-SVPWNAIISCHGIHGHGEKALKLFREMQDEG 573
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE---KEPGCSLIEVDGE------V 470
K + ++ + + + S +E LM+E I+ K GC ++++ G
Sbjct: 574 VKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGC-MVDLLGRAGFLEMA 632
Query: 471 HEFVAGGRLHPKA 483
++F+ LHP A
Sbjct: 633 YDFIKDMPLHPDA 645
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 141/301 (46%), Gaps = 33/301 (10%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K+ + +H +++ G + + + + G I+ A+ VF I ++ WNT+I G
Sbjct: 391 KNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISG 450
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++Q+ AI ++ M I+ + T+ S+ AYA +G + G ++HG ++K L
Sbjct: 451 YTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHL 510
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D F+ +I +Y CG L +A +F +V E
Sbjct: 511 DVFVGTCLIDLYGKCGRLVDAMCLFYQVPRE----------------------------- 541
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++V WN++IS + + ++AL+LFREMQ++ +KP T +SLL+AC+ G + +G+
Sbjct: 542 ---SSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGK 598
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMN 300
W + + + + ++D+ + G E A +P S W +++ ++
Sbjct: 599 WFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIH 658
Query: 301 G 301
G
Sbjct: 659 G 659
>gi|356545987|ref|XP_003541414.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 613
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/502 (34%), Positives = 286/502 (56%), Gaps = 8/502 (1%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H H+ K+G + + +L GD A VF + + +NT+I G ++
Sbjct: 101 QVHTHVFKSGFESNVFVVNALLQ-VYFVFGDARNACRVFDESPVRDSVSYNTVINGLVRA 159
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF--DQ 123
++ +F +M ++P T+ +L A + L G +HG V ++ F ++
Sbjct: 160 GRAGCSMRIFAEMR-GGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLVYRKLGCFGENE 218
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ N ++ MYA CG L A + + + V AW S++ A GE++ +RRLFD+M
Sbjct: 219 LLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEVARRLFDQMGE 278
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ VSW +MISGY F+EALELF E+++ ++P E +V+ L+ACA+LGA+ G I
Sbjct: 279 RDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACARLGALELGRRI 338
Query: 244 HNFLVTNCFEL--NTIVVTAIIDMYCKCGCPERALQVF--NTVPKKGLSCWNSMVFGLAM 299
H+ + ++ N A++DMY KCG E AL VF + K +NS++ GLA
Sbjct: 339 HHKYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDVFLKTSDDMKTTFLYNSIMSGLAH 398
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G A+ LF ++ L+PD ++++A+L AC HSG V+ K F M Y + P ++
Sbjct: 399 HGRGEHAMALFEEMRLVGLEPDEVTYVALLCACGHSGLVDHGKRLFESMLSEYGVNPQME 458
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAG L EA LI++MP +A+IW +LLSAC+ G++E+A+ A+++++ +
Sbjct: 459 HYGCMVDLLGRAGHLNEAYLLIQNMPFKANAVIWRALLSACKVDGDVELARLASQELLAM 518
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ + YV++SN+ + +EA R + V I+K PG S +E++G +H+F+AG +
Sbjct: 519 ENDHGARYVMLSNMLTLMDKHDEAASVRRAIDNVGIQKPPGWSHVEMNGTLHKFLAGDKS 578
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP+A +L D+ + ++ +G
Sbjct: 579 HPEAKATEFMLRDIDMGLKSIG 600
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 210/453 (46%), Gaps = 72/453 (15%)
Query: 11 LIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPR 69
++ TG DP + +++F + + +++++L+FTQI P+LF++N IIR FS S TP
Sbjct: 1 MVVTGRHHDPFLMTPLISFFAAANSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPH 60
Query: 70 NAILLFIDMLVTS-PIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNT 128
NA+ L+ ML +S PI P T+P L K+ A+L L R G Q+H V K G E + F+ N
Sbjct: 61 NALSLYKKMLSSSPPIFPDTFTFPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNA 120
Query: 129 IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS 188
++ +Y G A +FDE D V++N++I GL + G S R
Sbjct: 121 LLQVYFVFGDARNACRVFDESPVR-DSVSYNTVINGLVRAGRAGCSMR------------ 167
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
+F EM+ ++P E+T V+LL+AC+ L G +H +
Sbjct: 168 -------------------IFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRVVHGLVY 208
Query: 249 T--NCFELNTIVVTAIIDMYCKCGCPERALQV---------------------------- 278
CF N ++V A++DMY KCGC E A +V
Sbjct: 209 RKLGCFGENELLVNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSLVSAYALRGEVEV 268
Query: 279 ----FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
F+ + ++ + W +M+ G G EA++LF L+ ++PD + +A L+AC
Sbjct: 269 ARRLFDQMGERDVVSWTAMISGYCHAGCFQEALELFVELEDLGMEPDEVVVVAALSACAR 328
Query: 335 SGKVNQAKD-YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD-PDAII 392
G + + + ++++ + +VD + G +E A + D +
Sbjct: 329 LGALELGRRIHHKYDRDSWQCGHNRGFTCAVVDMYAKCGSIEAALDVFLKTSDDMKTTFL 388
Query: 393 WGSLLSACRKHGNIE--MAKQAAKQIIELDKNE 423
+ S++S HG E MA +++ L+ +E
Sbjct: 389 YNSIMSGLAHHGRGEHAMALFEEMRLVGLEPDE 421
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 146/302 (48%), Gaps = 18/302 (5%)
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN--IKPSEFT 223
A + S LF ++ + + +N +I + + AL L+++M + I P FT
Sbjct: 23 ANSNALHHSHLLFTQIPNPDLFLFNLIIRAFSLSQTPHNALSLYKKMLSSSPPIFPDTFT 82
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
LL +CAKL R G +H + + FE N VV A++ +Y G A +VF+ P
Sbjct: 83 FPFLLKSCAKLSLPRLGLQVHTHVFKSGFESNVFVVNALLQVYFVFGDARNACRVFDESP 142
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN-----HSGKV 338
+ +N+++ GL G ++++F+ ++ ++PD +F+A+L+AC+ G+V
Sbjct: 143 VRDSVSYNTVINGLVRAGRAGCSMRIFAEMRGGFVEPDEYTFVALLSACSLLEDRGIGRV 202
Query: 339 NQAKDYFTL--MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
Y L E + + +VD + G LE AE+++R+ W SL
Sbjct: 203 VHGLVYRKLGCFGENELL------VNALVDMYAKCGCLEVAERVVRNGNGKSGVAAWTSL 256
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
+SA G +E+A++ Q+ E D + M + Y + F+EA+E + ++++ +E
Sbjct: 257 VSAYALRGEVEVARRLFDQMGERD---VVSWTAMISGYCHAGCFQEALELFVELEDLGME 313
Query: 457 KE 458
+
Sbjct: 314 PD 315
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/451 (35%), Positives = 262/451 (58%), Gaps = 6/451 (1%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD--GAQLHG 112
W + I S++ A F DM + ++P +T+ +L + G LHG
Sbjct: 35 WTSRITLLSRNGRLAEAAKEFSDMRF-AGVEPNHITFIALLSGCGDFSSGSESFGDLLHG 93
Query: 113 RVVKQGLEFDQFIHNT-IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
K GL+ + + T II MY+ G +S+ARL+FD ++ + + + WN+MI G + G+I
Sbjct: 94 YACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHMEGK-NSMTWNTMIDGYMRKGKI 152
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
D++ +LFD+M R +SW +MI+G+V+ +EAL FREMQ ++P ++++L AC
Sbjct: 153 DDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDYVAIIAVLAAC 212
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
LGA+ G W+H +LV+ F N V + ID++C+CGC E A VF+ + K+ + WN
Sbjct: 213 TNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFDHMEKRTVVSWN 272
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
S++ + NG+ +E++ F +Q KP+ ++F LTAC+H G V + YF M +
Sbjct: 273 SVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEEGLRYFQTMKKE 332
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAK 410
Y+I P I+HY C+VD RAG LE+A +++SMP P+ ++ GSLL+ACR HG N +A+
Sbjct: 333 YRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRTHGNNTVLAE 392
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
+ K + + + YV++SN+YAA ++E A + R MK + ++K+PG S IE+D
Sbjct: 393 RLMKHLSDTNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCT 452
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
H F+AG H + + +L L +Q G
Sbjct: 453 HVFMAGDSAHVETGYIREVLEILSSDMQSQG 483
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 13/285 (4%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL ++ + + S G ++ A LVF ++ N WNT+I G+ +
Sbjct: 91 LHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHMEGKNSMTWNTMIDGYMRKG 150
Query: 67 TPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+A LF +M P+R +++ ++ + + G + + G+E D
Sbjct: 151 KIDDAYKLFDEM-------PERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDYV 203
Query: 125 IHNTIIYMYANCGFLSEARLMFDEV---DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
++ N G LS + + D +V NS I +CG ++ ++ +FD M
Sbjct: 204 AIIAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFDHM 263
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG- 240
R VSWNS+I + N E+L FR MQE+ KP+ T L AC+ +G + +G
Sbjct: 264 EKRTVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEEGL 323
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
+ ++D+Y + G E AL V ++P K
Sbjct: 324 RYFQTMKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMK 368
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 125/274 (45%), Gaps = 44/274 (16%)
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
D++ K+ T+SW S I+ RN + EA + F +M+ ++P+ T ++LL+ C
Sbjct: 18 DQTNAKTQKLNLSTTISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITFIALLSGC 77
Query: 232 AKL--GAIRQGEWIHNFLVTNCFELNTIVV-TAIIDMYCKCGCPER-------------- 274
G+ G+ +H + + N ++V TAII MY K G +
Sbjct: 78 GDFSSGSESFGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHMEGKNSM 137
Query: 275 -----------------ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN 317
A ++F+ +P++GL W +M+ G G+ EA+ F +QSS
Sbjct: 138 TWNTMIDGYMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSG 197
Query: 318 LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI----KPSIKHYSCMVDALGRAGL 373
++PDY++ IAVL AC + G ++ F L Y + + +++ + +D R G
Sbjct: 198 VEPDYVAIIAVLAACTNLGALS-----FGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGC 252
Query: 374 LEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+E A+ + M + W S++ +G+ +
Sbjct: 253 VELAQPVFDHMEKRT-VVSWNSVIVVFSANGHAD 285
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/530 (31%), Positives = 284/530 (53%), Gaps = 38/530 (7%)
Query: 8 HAHLIKTGLA---KDP---IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
H I +A +DP IA L + G I+ A ++F QI +P + WN +I G
Sbjct: 303 HGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITG 362
Query: 62 FSQSSTPRNAILLFIDM------------------------------LVTSPIQPQRLTY 91
+ Q+ A LF M L S + P +
Sbjct: 363 YMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSL 422
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
S+F A + + G Q+H VK G +F+ F N +I MY C + AR +F + T
Sbjct: 423 TSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVT 482
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ D+V+WNS + L + +DE+R FD M+SR+ VSW ++IS Y + EA+ F+
Sbjct: 483 K-DIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKT 541
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M ++ P+ + LL C LGA + G+ IH + + IV A+I MY KCGC
Sbjct: 542 MFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC 601
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ + ++F+ + ++ + WN+++ G A +G EAIK++ ++S+ + P+ ++F+ +L A
Sbjct: 602 AD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNA 660
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C+H+G V++ +F M++ Y + P +HY+CMVD LGR G ++ AE+ I MP +PD +
Sbjct: 661 CSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV 720
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IW +LL AC+ H N E+ K+AA+++ ++ + + YV++SN+Y++ + E E R +MK
Sbjct: 721 IWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMK 780
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ + KEPGCS ++ ++H FV G + H + E+ L +L L++ G
Sbjct: 781 QQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATG 830
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 181/380 (47%), Gaps = 29/380 (7%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A VF + + ++ WN++I + + P A L+ D + ++ T L
Sbjct: 48 GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-DAISGGNMR----TGAIL 102
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
Y +LG + RV LE + N +I Y G ++ AR +FD + + D
Sbjct: 103 LSGYGRLGRVLEAR----RVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR-D 157
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
V +WNSM+ G ++ ++R LF+KM RN VSW MISGY R +A ++F +M
Sbjct: 158 VSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR 217
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK-CGCPE 273
+ + P + S L+A LG + E + + FE + ++ TAI+++Y + +
Sbjct: 218 EGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLD 277
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI----AVL 329
A++ F ++ ++ W++M+ L+ G + AI ++ + D + I A++
Sbjct: 278 TAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY--------ERDPVKSIACRTALI 329
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
T G+++ A+ F + E P + ++ ++ + G++ EA++L MP +
Sbjct: 330 TGLAQCGRIDDARILFEQIPE-----PIVVSWNALITGYMQNGMVNEAKELFDKMPF-RN 383
Query: 390 AIIWGSLLSACRKHGNIEMA 409
I W +++ ++G E A
Sbjct: 384 TISWAGMIAGYAQNGRSEEA 403
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 195/494 (39%), Gaps = 98/494 (19%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ + A + G+ + A + C GDI A +F + ++ WN+++ G+
Sbjct: 111 RVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCH 170
Query: 65 SSTPRNAILLFIDM----LVTSPIQ--------------------------PQRLTYPSL 94
S +A LF M LV+ + P + + S
Sbjct: 171 SLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASA 230
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A LG L +K G E D I I+ +Y+ + + + F E E +
Sbjct: 231 LSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERN 290
Query: 155 VVAWNSM-------------------------------IIGLAKCGEIDESR-------- 175
W++M I GLA+CG ID++R
Sbjct: 291 EYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPE 350
Query: 176 -----------------------RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM 212
LFDKM RNT+SW MI+GY +N + +EAL L +E+
Sbjct: 351 PIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQEL 410
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
+ PS ++ S+ AC+ + A+ G +H+ V + N+ A+I MY KC
Sbjct: 411 HRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNM 470
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
E A QVF+ + K + WNS + L N +EA F + L D +S+ +++A
Sbjct: 471 EYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAY 526
Query: 333 NHSGKVNQAKDYFTLMTETYKI--KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
H+ + N+A F M +++ P + + +LG + + ++ + + D +
Sbjct: 527 AHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSEL 586
Query: 391 IIWGSLLSACRKHG 404
I+ +L+S K G
Sbjct: 587 IVANALISMYFKCG 600
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 141/325 (43%), Gaps = 48/325 (14%)
Query: 143 RLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKF 202
R E +V ++ I L + G + E+R +FD M R+ ++WNSMIS Y N
Sbjct: 22 RFAVRHAHGELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMP 81
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAI 262
A +L+ + N++ T LL+ +LG + + + + ++ E NT+ A+
Sbjct: 82 DAARDLYDAISGGNMR----TGAILLSGYGRLGRVLEARRVFDGML----ERNTVAWNAM 133
Query: 263 IDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG-------------------------- 296
I Y + G A ++F+ +P + +S WNSM+ G
Sbjct: 134 ISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWT 193
Query: 297 LAMNGY-----ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+ ++GY +A +F + L PD +F + L+A G ++ + L +T
Sbjct: 194 VMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKT 253
Query: 352 YKIKPSIKHYSCMVDALGR-AGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
+ + + +++ R +L+ A K SM + + W ++++A G I+
Sbjct: 254 -GFERDVVIGTAILNVYSRDTSVLDTAIKFFESMI-ERNEYTWSTMIAALSHGGRID--- 308
Query: 411 QAAKQIIELD--KNESCGYVLMSNL 433
AA + E D K+ +C L++ L
Sbjct: 309 -AAIAVYERDPVKSIACRTALITGL 332
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/497 (32%), Positives = 269/497 (54%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH + ++ G + + L + G + A L+F + + N+ WN++I + Q
Sbjct: 256 KEIHGYAMRAGF-DSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQ 314
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P+ A+++F ML ++P ++ A A LG LE +F
Sbjct: 315 NENPKEAMVIFQKML-DEGVKPTDVSVMGALHACADLG---------------DLERGRF 358
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
IH + + E+D VV NS+I KC E+D + +F K+ SR
Sbjct: 359 IHKLSVEL---------------ELDRNVSVV--NSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
VSWN+MI G+ +N + EAL F +MQ + +KP FT VS++ A A+L +WIH
Sbjct: 402 TIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ NC + N V TA++DMY KCG A +F+ + ++ ++ WN+M+ G +G
Sbjct: 462 GVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGK 521
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A++LF +Q ++P+ ++F++V++AC+HSG V F +M E Y I+PS+ HY M
Sbjct: 522 AALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAM 581
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L EA I MP P ++G++L AC+ H N+ A++ A+++ EL+ +
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDG 641
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
+VL++N+Y A+ +E+ + R+ M + K PGCS++E+ EVH F +G HP +
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSK 701
Query: 485 EVYLLLNDLGLLIQEMG 501
++Y L L I+E G
Sbjct: 702 KIYAFLEKLICQIKEAG 718
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 172/351 (49%), Gaps = 36/351 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K+L+ I + K GL ++ + +++++ FC G ++ A VF I K ++ T++
Sbjct: 50 LKELRHILPLIFKNGLYQEHLFQTKLVSLFCRY--GSVDEAARVFEPIDKKLNVLYYTML 107
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+GF++ S A+ F+ M ++P + L K R G ++HG +VK G
Sbjct: 108 KGFAKVSDLDKALKFFVRMR-DDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F + MYA KC ++ E+R++FD
Sbjct: 167 SLDLFAMTGLENMYA--------------------------------KCRQVHEARKVFD 194
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M R+ VSWN++++GY +N + ALE+ M E+N+KPS T+VS+L A + L IR
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRI 254
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ IH + + F+ + TA++DMY KCG + A +F+ + ++ + WNSM+
Sbjct: 255 GKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQ 314
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N EA+ +F + +KP +S + L AC G + + + L E
Sbjct: 315 NENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 212 MQEQNIKPS---EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
+ ++N P+ E LL C+ L +R I + N + T ++ ++C+
Sbjct: 25 LSQRNYIPANVYEHPAALLLERCSSLKELRH---ILPLIFKNGLYQEHLFQTKLVSLFCR 81
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G + A +VF + KK + +M+ G A ++A+K F ++ ++P +F +
Sbjct: 82 YGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYL 141
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L C ++ K+ L+ ++ + + + + + + EA K+ MP +
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKS-GFSLDLFAMTGLENMYAKCRQVHEARKVFDRMP-ER 199
Query: 389 DAIIWGSLLSACRKHGNIEMA 409
D + W ++++ ++G MA
Sbjct: 200 DLVSWNTIVAGYSQNGMARMA 220
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/498 (34%), Positives = 280/498 (56%), Gaps = 36/498 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K HA ++ GL D + S IL S G +++A VF ++ +L WNT+I +Q
Sbjct: 84 KACHAQILLMGLKTD-LLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQ 142
Query: 65 SSTPRNAILLFIDMLVT-SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ A+ L + M +P T S+ A A + LH +K ++ +
Sbjct: 143 NGEENEALDLLLQMQREGTPFS--EFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNV 200
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ ++ +YA CG + + A C +F+ M
Sbjct: 201 FVATALLDVYAKCGLMKD------------------------AVC--------VFESMPD 228
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ V+W+SM +GYV+N +++AL LFR+ E +K +F M S++ ACA L A+ +G+ +
Sbjct: 229 RSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQV 288
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
+ L + F N V +++IDMY KCG E + +VF V K+ + WN+M+ GL+ +
Sbjct: 289 NALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARS 348
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
E + LF +Q L P+ ++F++VL+AC H G V + + YF LMT+ + + P++ HYSC
Sbjct: 349 LEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSC 408
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD L RAG + EA LI +P + A +WGSLL++CR HGN+E+A+ AAK++ +++ +
Sbjct: 409 MVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHN 468
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S Y+L+SN+YAA+ +++E + R L+KE ++KE G S IE+ +VH F+ G R HPK
Sbjct: 469 SGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKI 528
Query: 484 PEVYLLLNDLGLLIQEMG 501
E+Y LN++ +Q++G
Sbjct: 529 VEIYSKLNEVMDELQKLG 546
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 150/311 (48%), Gaps = 34/311 (10%)
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ K A+ L G H +++ GL+ D N +I MY+ CG + AR +FDE+ +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR- 128
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+V+WN+MI L + GE + EAL+L +MQ
Sbjct: 129 SLVSWNTMIGSLTQNGEEN-------------------------------EALDLLLQMQ 157
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ SEFT+ S+L ACA A+ + + +H F + +LN V TA++D+Y KCG +
Sbjct: 158 REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMK 217
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A+ VF ++P + + W+SM G N +A+ LF + LK D +V+ AC
Sbjct: 218 DAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACA 277
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
+ + K L++++ +I S ++D + G +EE+ K+ R + + ++W
Sbjct: 278 GLAAMIEGKQVNALLSKS-GFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEK-RNVVLW 335
Query: 394 GSLLSACRKHG 404
+++S +H
Sbjct: 336 NAMISGLSRHA 346
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 280/523 (53%), Gaps = 66/523 (12%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L + HAH+I GL +D S L+ TS ++Y+ +F ++ P+ F++N +++ FS
Sbjct: 25 LHQFHAHIIHKGLEQDHFIISHFLSISTS----VSYSTSIFNRLLNPSTFLYNILLKIFS 80
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
++S + LF M + + TYP L K + ++G +HG ++ G+ D
Sbjct: 81 KNSQFIDTFSLFYRMKQSEYALSDKYTYPLLIKVCSNELRLKEGEIVHGSAIRCGVSDDV 140
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVD------------------------------TEF 153
++ +++I Y C + AR +FDE+ E
Sbjct: 141 YVGSSLISFYGKCKEILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAKRVFERMPER 200
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS------------------------- 188
++ +WN+MI GL K G++ +R++FD+MV RN VS
Sbjct: 201 NLPSWNAMISGLGKAGDLSGARKVFDEMVERNVVSFTVMIDGYAKVGDMASARALFDEAP 260
Query: 189 ------WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
W+++ISGY RN + EA+++F EM N+KP EF MVSL++AC++LG +W
Sbjct: 261 EKDVVAWSALISGYSRNEQPNEAVKIFFEMVSMNVKPDEFIMVSLMSACSQLGNSDLAKW 320
Query: 243 IHNFLVTNCFELNTI-VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+ ++L + V+ A+IDM+ KCG E+A+++F +P + L S++ GL+++G
Sbjct: 321 VDSYLSQTSIDTRQAHVLAALIDMHAKCGNMEKAVKLFQDMPSRDLIPCCSLIQGLSIHG 380
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
EA++LF+ + L PD ++F +LTAC+ G + +F M Y + PS HY
Sbjct: 381 RGVEAVELFNRMLDEGLIPDTVAFTVILTACSRGGLIEDGWHFFDTMKNKYSVVPSPNHY 440
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+CMVD L RAG L A L++SMP P A WG+LL AC+ HG++E+ ++ A +++EL+
Sbjct: 441 ACMVDLLSRAGQLRAAYDLLKSMPLKPHACAWGALLGACKLHGDVELREEVANRLLELEP 500
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
++ YVL+SN+YA++ Q+ + R MKE I K PGCS I
Sbjct: 501 EKAGSYVLLSNIYASANQWLDVSIVRDEMKERGIRKIPGCSYI 543
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 163/431 (37%), Positives = 253/431 (58%), Gaps = 4/431 (0%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
+G ++ A +F +I + ++F W +I GF Q R A+LL+ M S + P +
Sbjct: 443 SGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMR-KSDLHPNEVLIVD 501
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
L A Q +G Q H +VK G FI TII YA C + A L + D
Sbjct: 502 LLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKS- 560
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+ + N MI+G K G ID++R++FD M ++ SW++MISGY +N AL+LF M
Sbjct: 561 HLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMI 620
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ ++P+E TMVS+ +A A LG + +G W H ++ LN + AIIDMY KCG +
Sbjct: 621 DSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSID 680
Query: 274 RALQVFNTVPKKG--LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
AL VF + K +S WN+++ GLAM+G+ N ++++FS LQ ++K + I+F+ VL+A
Sbjct: 681 TALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSA 740
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H+G V + YF M + ++P+IKHY C+VD LGR G L EAE+++R+MP D +
Sbjct: 741 CCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVV 800
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
IWG+LL++ R HG +E+ ++AA+ + L + G VL+SNLYA + +E+A R ++
Sbjct: 801 IWGTLLASSRTHGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQ 860
Query: 452 EVKIEKEPGCS 462
++ + PG S
Sbjct: 861 SQRMIRSPGYS 871
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 192/403 (47%), Gaps = 37/403 (9%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A +F ++ + + T+I G +Q+ AI +F DM ++ + P +T S+ A +
Sbjct: 317 ARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMR-SAGVAPNEVTMASVMSACS 375
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
+G + LH V+K I +++MY L + + +F+E+ + V+WN
Sbjct: 376 HIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVR-NTVSWN 434
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
M+ G K G +D++R LF+++ R+ SW MI G+V+ + ++AL L+ M++ ++ P
Sbjct: 435 VMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHP 494
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC---------- 269
+E +V LL+AC + +I +G H+ +V N F + II Y C
Sbjct: 495 NEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQY 554
Query: 270 ---------------------GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
G ++A Q+F+ +P+K + W++M+ G A N + A+
Sbjct: 555 QMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALD 614
Query: 309 LFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS-CMVDA 367
LF G+ S ++P+ I+ ++V +A GK+ + + + K+ P + S ++D
Sbjct: 615 LFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAHEYVCN--KVIPLNDNLSAAIIDM 672
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAII-WGSLLSACRKHGNIEMA 409
+ G ++ A + R + + W +++ HG+ ++
Sbjct: 673 YAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLS 715
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 172/372 (46%), Gaps = 63/372 (16%)
Query: 89 LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE 148
L+ S K A G Q+H V+K G + FI N++I MY CG LS ARL+FD
Sbjct: 233 LSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDS 292
Query: 149 VDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
D V+ N M+ G K +++ +R+LF KM R VS+ +MI G +N + EA+E+
Sbjct: 293 CSV-LDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 351
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC- 267
F++M+ + P+E TM S+++AC+ +G I +H ++ F ++ T ++ MYC
Sbjct: 352 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 411
Query: 268 ------------------------------KCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
K G ++A ++F +P++ + W M+ G
Sbjct: 412 FSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGF 471
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET------ 351
+A+ L+S ++ S+L P+ + + +L+AC S + + + + +L+ +
Sbjct: 472 VQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFD 531
Query: 352 ----------------------YKI--KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
Y++ K + + M+ + G++++A ++ MP +
Sbjct: 532 FIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMP-E 590
Query: 388 PDAIIWGSLLSA 399
D W +++S
Sbjct: 591 KDVFSWSTMISG 602
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 48/267 (17%)
Query: 195 GYVRNVKFKEALELF-----REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
G R + K+AL R+ + E ++VS L CA AI G+ IH ++
Sbjct: 201 GTKRGRRHKKALATLGLNGGRDQPSSSSLDCELSVVSALKYCASSSAISSGQQIHAIVLK 260
Query: 250 NCFELNTIVVTAIIDMYCKCG-----------CP--------------------ERALQV 278
F NT ++ ++I+MY KCG C E A Q+
Sbjct: 261 YGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLENARQL 320
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
F +P++G + +M+ GLA N EAI++F ++S+ + P+ ++ +V++AC+H G +
Sbjct: 321 FAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGI 380
Query: 339 NQAKDYFTLMTETY-----KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
+ L+ + + I ++ H C+ + L++ ++L MP + + W
Sbjct: 381 WNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSS------LKDTKRLFNEMPVR-NTVSW 433
Query: 394 GSLLSACRKHGNIEMAKQAAKQIIELD 420
+L K G ++ A++ ++I E D
Sbjct: 434 NVMLKGYVKSGLVDQARELFERIPERD 460
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 172/536 (32%), Positives = 282/536 (52%), Gaps = 42/536 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +HA + +GLA+DP AS +L G A VF ++ + N+ W+ +I G+S
Sbjct: 37 RALHAAAVVSGLAEDPFVASSLL-HSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSA 95
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD------------------ 106
A L ++ + ++ ++P +T+ L + G A D
Sbjct: 96 RGDAEAAWGL-LEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDAT 154
Query: 107 -----------------GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
G Q+HG VVK G D + +I MY CG E +F E
Sbjct: 155 GVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHE- 213
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR----NTVSWNSMISGYVRNVKFKEA 205
+ DV + N+++ GL++ ++ E+ LF + + R N VSW S+++ V+N + EA
Sbjct: 214 SSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEA 273
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
++LFR MQ ++P+ T+ +L A A + A+ G H F + F + V +A++DM
Sbjct: 274 VDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDM 333
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y KCG A +F+ +P + + WN+M+ G AM+G A++LF +Q KPD ++F
Sbjct: 334 YAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTF 393
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
VL AC+ +G + + YF M + + I P ++HY+CMV LGR+G L+EA LI MP
Sbjct: 394 TCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMP 453
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+PD+ IWGSLL +CR +GN+ +A+ AA+++ +L+ + YVL+SN+YA+ ++
Sbjct: 454 FEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNR 513
Query: 446 ERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R MK + ++KE GCS IE+ +VH +AG HP + LN L + + +G
Sbjct: 514 VRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLG 569
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 149/299 (49%), Gaps = 11/299 (3%)
Query: 80 VTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFL 139
V+ P P L PS K+ LAR LH V GL D F+ +++++ Y G
Sbjct: 14 VSFPPDPHLL--PSALKSCPAQPLAR---ALHAAAVVSGLAEDPFVASSLLHSYIRLGAT 68
Query: 140 SEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM----VSRNTVSWNSMISG 195
AR +FD + E +VV W+++I G + G+ + + L ++M V N ++WN ++SG
Sbjct: 69 GAARSVFDRM-PEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSG 127
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN 255
R+ + +A+ M + P + L+A + + G+ +H ++V L+
Sbjct: 128 LNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLD 187
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
VVTA+IDMY KCG + ++VF+ ++ N++V GL+ N +EA+ LF
Sbjct: 188 ACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFIC 247
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
++ + +S+ +++ C +G+ +A D F M ++ ++P+ C++ A L
Sbjct: 248 RGVELNVVSWTSIVACCVQNGRDLEAVDLFRTM-QSIGVEPNSVTIPCVLPAFANVAAL 305
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
L+ ++ + P + S L +C R +H V + + V ++++ Y
Sbjct: 7 LYHFLRHVSFPPDPHLLPSALKSCPAQPLARA---LHAAAVVSGLAEDPFVASSLLHSYI 63
Query: 268 KCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIA 327
+ G A VF+ +P+K + W++++ G + G A L ++S+ ++P+ I++
Sbjct: 64 RLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNG 123
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALG 369
+++ N SG+ A M + P SC + A+G
Sbjct: 124 LVSGLNRSGRALDAVTALVRM-HSEGFFPDATGVSCALSAVG 164
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 161/495 (32%), Positives = 279/495 (56%), Gaps = 39/495 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTII 59
M ++ ++H ++IK+ DP++ +L C + A + ++YA VF++I P+ +NTII
Sbjct: 1 MNNVYRLHCYIIKSSKQNDPLSLRTLLLSCVAAAPESLSYARYVFSRIPSPDTIAYNTII 60
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R S+ P +++ F M ++ I T+P + KA ++L + LH +VK GL
Sbjct: 61 RSHSRF-FPSHSLSYFFSMR-SNGIPLDNFTFPFVLKACSRLQI---NLHLHSLIVKYGL 115
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F+ N +I +Y CG ++ + ++FD
Sbjct: 116 GSDIFVQNALICVYG--------------------------------YCGSLEMAVKVFD 143
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIR 238
+M R++VSW+++I+ ++ N EAL+LF +MQ E + P E TM+S+++A + LG +
Sbjct: 144 EMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHLGDLE 203
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G W+ F+ F ++ + TA+IDM+ +CG + ++ VF + + + W +++ GL
Sbjct: 204 LGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALINGLG 263
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G EA+ +F ++ S ++PDY++F VL AC+H G V + D F + + Y + P +
Sbjct: 264 IHGRSMEALAMFHSMRKSGVQPDYVTFSGVLVACSHGGLVKEGWDIFESIRKVYGMDPLL 323
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
HY CMVD LGRAGLL EA + MP P++IIW +LL AC H N+ +A++ +I +
Sbjct: 324 DHYGCMVDILGRAGLLNEAYDFVERMPMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISK 383
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
+ +++ VL+SN+Y A+ ++ E R M+E +I KEPGCS I VD +HEFV+G
Sbjct: 384 ISSSQNGDLVLLSNVYGAAGRWVEKASIRSKMREKRIGKEPGCSSINVDQTIHEFVSGDN 443
Query: 479 LHPKAPEVYLLLNDL 493
HP++ ++ L+ +
Sbjct: 444 SHPQSEDITKFLSSI 458
>gi|449434472|ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g51320-like [Cucumis sativus]
Length = 575
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 164/511 (32%), Positives = 281/511 (54%), Gaps = 29/511 (5%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++L + H HLI +GL D A+R+L S GDI Y L+F IK PN F N +I+
Sbjct: 62 VRELFQFHGHLITSGLFNDHFWANRVL-LQASEFGDIVYTVLIFRHIKVPNTFCVNRVIK 120
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+S S+ P A+ ++ + L + ++P T+ SLF A A G G + HG+ K G++
Sbjct: 121 AYSLSTVPLEAVFVYFEWL-GNGLRPDSYTFLSLFSACASFGCGASGRKCHGQAFKNGVD 179
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N++I+MY C + R +FDE+ T+ D+V+WNS++ A+ G++ + +FD
Sbjct: 180 SVMVLGNSLIHMYGCCKHIELGRKVFDEMSTQ-DLVSWNSIVTAYARVGDLYTAHDMFDV 238
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M RN VSWN MIS Y+R A++LFR M I+ + TMV++L+AC++ + +G
Sbjct: 239 MPERNVVSWNLMISEYLRGGNPGCAMKLFRNMVNVGIRGNNTTMVNVLSACSRSARLNEG 298
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+H F+ + + TA++DMY KC A +VF+ + + L WN+M+ G +++
Sbjct: 299 RSVHGFMYRASMKFCVFINTALVDMYSKCHRVSVARRVFDRLMIRNLVTWNAMILGHSLH 358
Query: 301 GYENEAIKLFSGL---------QSSNLK------------PDYISFIAVLTACNHSGKVN 339
G + ++LF + ++ N K PD I+FI VL AC +G +
Sbjct: 359 GNPKDGLELFEEMVGELREINEETGNGKKFKQDEGKRKVFPDQITFIGVLCACARAGLLK 418
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD-----PDAIIWG 394
A++YF M + ++P+ HY C+ + GL+E+A +++R+MP D ++++W
Sbjct: 419 DAENYFDEMINVFLVRPNFGHYWCLANVYVAVGLIEQAVEILRNMPEDNEDFSSESVVWI 478
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
LL+ CR G++ + +Q AK +I+++ Y L+ N+YA + ++E+ +LLMKE +
Sbjct: 479 DLLTTCRFVGDVSLGEQIAKYLIDMEPKNDSYYRLLLNIYAVAGRWEDVSRIKLLMKEKR 538
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
+ GC L+++ VH G L + E
Sbjct: 539 LGTMSGCRLVDLKEIVHSLKLGNHLQERMKE 569
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 274/519 (52%), Gaps = 73/519 (14%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
WNT +R ++ A+ L+ ML +P T+P K+ A L L G+Q HG++
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGD-RPNAFTFPFALKSCAALSLPILGSQFHGQI 75
Query: 115 VKQGLEFDQFI---------------------------------HNTIIYMYANCGFLSE 141
K G F+ F+ +N ++ Y + SE
Sbjct: 76 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135
Query: 142 ARLMFDEVDTE--------------------------------------FDVVAWNSMII 163
A L+F +++ E DV N I
Sbjct: 136 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 195
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFT 223
KCG ++ +++LFD+M + +SWN+M+SGY +N LEL+R M + P T
Sbjct: 196 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 255
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
+V +L++CA LGA G + + + F N + A+I+MY +CG +A VF+ +P
Sbjct: 256 LVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 315
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
++ L W +++ G M+G+ A++LF + S ++PD +F+ VL+AC+H+G +Q +
Sbjct: 316 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 375
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
YF +M Y+++P +HYSCMVD LGRAG L+EA+ LI SMP PD +WG+LL AC+ H
Sbjct: 376 YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIH 435
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
N+E+A+ A +++IEL+ YVL+SN+Y+ + + + R++MKE K++K+PGCS
Sbjct: 436 KNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSY 495
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDL-GLLIQEMG 501
+E+ G VH F+ G R H ++ E+Y +L +L +++QE G
Sbjct: 496 VELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFG 534
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 46/330 (13%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTS--PAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+H +K G D S + F T G +NYA +F ++ L WN ++ G++Q
Sbjct: 174 LHCSTLKYGFDSD---VSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQ 230
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ N + L+ +M + + P +T + + A LG G ++ ++ G + F
Sbjct: 231 NGLATNVLELYRNMDMNG-VHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPF 289
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI--IGLAKCGEIDESRRLFDKMV 182
++N +I MYA CG L++A+ +FD + E +V+W ++I G+ GEI
Sbjct: 290 LNNALINMYARCGNLTKAQAVFDGM-PERTLVSWTAIIGGYGMHGHGEI----------- 337
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG-E 241
A++LF+EM I+P V +L+AC+ G QG E
Sbjct: 338 ----------------------AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 375
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMN 300
+ E + ++D+ + G + A + ++P K + W +++ +
Sbjct: 376 YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI- 434
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
++N + + + L+P+ I + +L+
Sbjct: 435 -HKNVELAELAFERVIELEPENIGYYVLLS 463
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 13/240 (5%)
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
+ WN+ + + +F +AL L+ +M +P+ FT L +CA L G H
Sbjct: 14 STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHG 73
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF--NTVPKKGLSCWNSMVFGLAMNGYE 303
+ V T +I MYCK + A +VF N +K C+N++V G N
Sbjct: 74 QITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 133
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN-QAKDYFTLMTETYKIKPSIKHYS 362
+EA+ LF + + + ++ + ++ AC +N + T Y + +
Sbjct: 134 SEAVLLFRQMNEEGVPVNSVTLLGLIPAC--VSPINLELGSSLHCSTLKYGFDSDVSVVN 191
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C + + G + A+KL MP I W +++S ++G A ++EL +N
Sbjct: 192 CFITMYMKCGSVNYAQKLFDEMPVK-GLISWNAMVSGYAQNG-------LATNVLELYRN 243
>gi|38347497|emb|CAE05845.2| OSJNBa0091C07.7 [Oryza sativa Japonica Group]
Length = 749
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 295/585 (50%), Gaps = 100/585 (17%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPN-------------- 51
++H ++K+G P+ + +L F +S D++ A +F + N
Sbjct: 133 QVHCQVVKSGSDDFPVVGASLLDFYSS-CLDLDAARTLFDTLHANNELLWSPMVVALVRF 191
Query: 52 ------------------LFIWNTIIRGFSQSSTPR--NAILLFIDMLVTSPIQPQRLTY 91
LF W II G+++ + ++ LF+ +L + P TY
Sbjct: 192 NLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTY 251
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN---------------- 135
S+ +A ++G G +HG +++ G E +Q I + ++ +Y
Sbjct: 252 DSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQM 311
Query: 136 ----------CGFLS-----EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
GF+S +A+L+F ++ TE D ++N MI A G +++ RR+F+
Sbjct: 312 PSLITSNTLIAGFISMGRTEDAKLVFSQM-TEHDSGSYNLMIKAYADEGRLEDCRRMFEM 370
Query: 181 MV--------------------------------SRNTVSWNSMISGYVRNVKFKEALEL 208
M RNTV+WNSMISGYV+N + EAL+L
Sbjct: 371 MPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMISGYVQNDQSSEALKL 430
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
F M +I+ S T +LL+ACA +G I QG+ +H L FE N V TA++DMY K
Sbjct: 431 FAVMCRLSIECSASTFPALLHACATIGTIEQGKMVHALLCKTPFESNGYVGTALVDMYSK 490
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CGC A F+ + ++ W S++ GLA NG+ EAI F+ + +N+KP+ I+F+ +
Sbjct: 491 CGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIVQFARMLKNNVKPNEITFLGI 550
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L A +G VN+ +F M E+Y + P+++HY+C VD LGRA + EAEK I MP
Sbjct: 551 LMASARAGLVNKGMRFFHSM-ESYGVVPTVEHYTCAVDLLGRARRVREAEKFISKMPIPA 609
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D ++WG+LL+AC ++EM ++ A+++ + YV MSN+YA ++E+ ++ R
Sbjct: 610 DGVVWGALLTACWYTMDLEMGEKVAEKLFYMGTKHISAYVAMSNIYAKLGKWEDVVKVRT 669
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
++ + +KEPGCS IEV VH F+ R HP+ E+YL+L DL
Sbjct: 670 RLRSINAKKEPGCSWIEVKDMVHVFLVEDRNHPEREEIYLMLEDL 714
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 179/361 (49%), Gaps = 15/361 (4%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
VF +++ WN + ++ R+A+ M S TY S A A+
Sbjct: 68 VFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMH-RSAAGLDEATYASALGACARGR 126
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
R G Q+H +VVK G + + +++ Y++C L AR +FD + +++ W+ M+
Sbjct: 127 CLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELL-WSPMV 185
Query: 163 IGLAKCGEIDESRRLFDKMV-SRNTVSWNSMISGYVR--NVKFKEALELFREM-QEQNIK 218
+ L + + ++ L +M SR+ +W ++ISGY R N ++LELF ++ E +
Sbjct: 186 VALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVM 245
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
P+EFT S+L AC K+GA+ G IH L+ + FE ++ +A++D+YC+ G + A+ V
Sbjct: 246 PNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMV 305
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
+N + L N+++ G G +A +FS + + D S+ ++ A G++
Sbjct: 306 YNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMT----EHDSGSYNLMIKAYADEGRL 361
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
+ F +M + ++ + M+ L + G LEE KL + + + + W S++S
Sbjct: 362 EDCRRMFEMMP-----RRNMVTLNSMMSVLLQNGKLEEGRKLFEQIKDERNTVTWNSMIS 416
Query: 399 A 399
Sbjct: 417 G 417
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 130/305 (42%), Gaps = 42/305 (13%)
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R +FD M R +SWN+ ++ + R + ++AL M E T S L ACA+
Sbjct: 65 ARGVFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACAR 124
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV----------- 282
+R G +H +V + + +V +++D Y C + A +F+T+
Sbjct: 125 GRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPM 184
Query: 283 ---------------------PKKGLSCWNSMVFGLA--MNGYENEAIKLFSGLQSSN-L 318
P + L W +++ G A N Y ++++LF L + + +
Sbjct: 185 VVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGV 244
Query: 319 KPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEA 377
P+ ++ +VL AC G + + + L+ ++ + I S +VD R+G +++A
Sbjct: 245 MPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLIT--SALVDLYCRSGAVDDA 302
Query: 378 EKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
+ + P I +L++ G E AK Q+ E D S Y LM YA
Sbjct: 303 VMVYNGLQM-PSLITSNTLIAGFISMGRTEDAKLVFSQMTEHD---SGSYNLMIKAYADE 358
Query: 438 YQFEE 442
+ E+
Sbjct: 359 GRLED 363
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +HA L KT + + ++ S G ++ A F+ I PN+ W ++I G +Q
Sbjct: 463 KMVHALLCKTPFESNGYVGTALVDM-YSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQ 521
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ AI+ F ML + ++P +T+ + A A+ GL G + + G+
Sbjct: 522 NGHWMEAIVQFARMLKNN-VKPNEITFLGILMASARAGLVNKGMRFFHSMESYGVVPTVE 580
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK---M 181
+ + + + EA ++ D V W +++ +++ ++ +K M
Sbjct: 581 HYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYM 640
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
+++ ++ +M + Y + K+++ +++ ++ N K
Sbjct: 641 GTKHISAYVAMSNIYAKLGKWEDVVKVRTRLRSINAK 677
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 261/457 (57%), Gaps = 38/457 (8%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
+N A+ +F Q+ + N+ W T+I +S+ + A+ L + ML ++P TY S+ +
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML-RDNVRPNVYTYSSVLR 170
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
+ + D LH ++K+GLE D F+ + +I ++A
Sbjct: 171 SCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFA---------------------- 205
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
K GE +++ +FD+MV+ + + WNS+I G+ +N + ALELF+ M+
Sbjct: 206 ----------KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG 255
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+ T+ S+L AC L + G H +V ++ + I+ A++DMYCKCG E AL
Sbjct: 256 FIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDAL 313
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
+VFN + ++ + W++M+ GLA NGY EA+KLF ++SS KP+YI+ + VL AC+H+G
Sbjct: 314 RVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAG 373
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
+ YF M + Y I P +HY CM+D LG+AG L++A KL+ M +PDA+ W +L
Sbjct: 374 LLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTL 433
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
L ACR N+ +A+ AAK++I LD ++ Y L+SN+YA S +++ E R M++ I+
Sbjct: 434 LGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIK 493
Query: 457 KEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
KEPGCS IEV+ ++H F+ G HP+ EV LN L
Sbjct: 494 KEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
A++ +Q + T L+ C A+ +G I L N +V +I
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
+MY K A Q+F+ +P++ + W +M+ + +A++L + N++P+
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
++ +VL +CN V + ++ E + ++ S ++D + G E+A +
Sbjct: 164 TYSSVLRSCNGMSDVRML--HCGIIKEGLESDVFVR--SALIDVFAKLGEPEDALSVFDE 219
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
M + DAI+W S++ ++ ++A + K++
Sbjct: 220 MVTG-DAIVWNSIIGGFAQNSRSDVALELFKRM 251
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/406 (38%), Positives = 241/406 (59%), Gaps = 32/406 (7%)
Query: 96 KAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDV 155
+A A+L R+G ++H ++ G E F+ NT+++MYA
Sbjct: 3 RAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYA--------------------- 41
Query: 156 VAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ 215
CG + + +LF+ M RN V+WNS+I+GY N + EAL LFREM +
Sbjct: 42 -----------ACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLR 90
Query: 216 NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
++P FTMVSLL+ACA+LGA+ G H ++V + N A++D+Y KCG +A
Sbjct: 91 GVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQA 150
Query: 276 LQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+VF+ + +K + W S++ GLA+NG+ EA++LF L+ L P I+F+ VL AC+H
Sbjct: 151 HKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHC 210
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
G V++ DYF M E Y I P I+HY CMVD LGRAGL+++A + I++MP P+A++W +
Sbjct: 211 GMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRT 270
Query: 396 LLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
LL AC HG++ + + A Q+++L+ S YVL+SNLYA+ ++ + + R M +
Sbjct: 271 LLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGV 330
Query: 456 EKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+K PG SL+E+ +HEFV G R HP+ E+Y+ L ++ L++ G
Sbjct: 331 KKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEG 376
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 117/240 (48%), Gaps = 34/240 (14%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++ +K+H+ I+ G + + L + G A+ +F + + NL WN++I
Sbjct: 11 VREGEKVHSIAIRNGF-ESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVIN 69
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G++ + P A+ LF +M + ++P T SL A A+LG G + H +VK GL+
Sbjct: 70 GYALNGRPNEALTLFREMGLRG-VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLD 128
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ N ++ +YA KCG I ++ ++FD+
Sbjct: 129 GNLHAGNALLDLYA--------------------------------KCGSIRQAHKVFDE 156
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M ++ VSW S+I G N KEALELF+E++ + + PSE T V +L AC+ G + +G
Sbjct: 157 MEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEG 216
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 158/499 (31%), Positives = 275/499 (55%), Gaps = 34/499 (6%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L ++HAH+I +G + +++L + AG I+Y +F + P+ F++ ++I+ S
Sbjct: 28 LHQVHAHIIVSGYGRSRSLLTKLLNLACA-AGSISYTRQIFLAVPNPDSFLFTSLIKSTS 86
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+S L F +V S + P T+ S+ K+ A L + G +HG V+ G D
Sbjct: 87 KSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDV 146
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
++ ++ +Y KCG++ +R++FDK+
Sbjct: 147 YVQAALVALYG--------------------------------KCGDLINARKVFDKIRE 174
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ V+WNSMISGY +N KEA+ LF M+E ++P T VS+L+ACA LGA G W+
Sbjct: 175 RSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWV 234
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++V N +LN ++ T++I+MY +CG +A +VF+++ ++ + W +M+ G NGY
Sbjct: 235 HEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYG 294
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
++A++LF ++ + L P+ I+F+AVL+AC H+G VN+ + F + E Y + P ++H C
Sbjct: 295 SQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVC 354
Query: 364 MVDALGRAGLLEEAEKLIR-SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
+VD LGRAGLL+EA I+ +P +P I ++L AC+ H N ++ Q A+ ++ +
Sbjct: 355 LVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAAEPE 414
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
YV++SN+YA + + ++ R M ++K+ G S +EVD + + F G + H +
Sbjct: 415 NPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVGYSTVEVDQKTYLFSMGDKSHSE 474
Query: 483 APEVYLLLNDLGLLIQEMG 501
+Y L++L E G
Sbjct: 475 TNAIYHYLDELMWKCSEAG 493
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 278/501 (55%), Gaps = 34/501 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ LK++H + + GL + + A+ +A T G + + VF + + WN ++
Sbjct: 323 LQSLKELHGYSWRHGLQSNELVANAFIAAYTR-CGALCSSERVFDLMDTKTVSSWNALLC 381
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G++Q+S PR A+ L++ M S + P T SL A +++ G ++HG ++ GL
Sbjct: 382 GYAQNSDPRKALDLYLQM-TDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLA 440
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D FI +++ +Y CG A++ LFD
Sbjct: 441 VDPFIGISLLSLYICCGKPFAAQV--------------------------------LFDG 468
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ VSWN MI+GY +N EA+ LFR+M I+P E ++ + AC++L A+R G
Sbjct: 469 MEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLG 528
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H F + + V ++IIDMY K GC + ++F+ + +K ++ WN ++ G ++
Sbjct: 529 KELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIH 588
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA++LF + LKPD +F +L AC+H+G V +YF M + I+P ++H
Sbjct: 589 GRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEH 648
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+C+VD LGRAG +++A +LI MP DPD+ IW SLLS+CR HGN+ + ++ A +++EL+
Sbjct: 649 YTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELE 708
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ YVL+SNL+A S ++++ R MK++ ++K+ GCS IEV G+VH F+ G +
Sbjct: 709 PEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEML 768
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ EV L + I +G
Sbjct: 769 PELEEVRETWRRLEVKISSIG 789
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 186/441 (42%), Gaps = 69/441 (15%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH K L D + ++A G + A VF + + NL WN+II GFS++
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAM-YGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181
Query: 67 TPRNAILLFIDMLV-TSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
+ + F +MLV P T ++ A G +HG VK GL + +
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+N++I MY+ C FLS E++ LFDK +N
Sbjct: 242 NNSLIDMYSKCRFLS--------------------------------EAQLLFDKNDKKN 269
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQN--IKPSEFTMVSLLNACAKLGAIRQGEWI 243
VSWNSMI GY R L ++MQ ++ +K EFT++++L C + ++ + +
Sbjct: 270 IVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKEL 329
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H + + + N +V A I Y +CG + +VF+ + K +S WN+++ G A N
Sbjct: 330 HGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDP 389
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL-MTETYKIKP------ 356
+A+ L+ + S L PD+ + ++L AC+ ++ ++ + + P
Sbjct: 390 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISL 449
Query: 357 -----------------------SIKHYSCMVDALGRAGLLEEAEKLIRSMPSD---PDA 390
S+ ++ M+ + GL +EA L R M SD P
Sbjct: 450 LSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE 509
Query: 391 IIWGSLLSACRKHGNIEMAKQ 411
I + AC + + + K+
Sbjct: 510 IAIMCVCGACSQLSALRLGKE 530
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 155/340 (45%), Gaps = 49/340 (14%)
Query: 14 TGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRN 70
T D + +RI+ + C SP+ + +VF ++++ NLF WN I+ ++++ +
Sbjct: 28 TQFCNDFVLNTRIITMYSMCGSPSD----SRMVFDKLRRKNLFQWNAIVSAYTRNELFED 83
Query: 71 AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTII 130
A+ +F +++ + +P T P + KA A L G +HG K L D F+ N +I
Sbjct: 84 AMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALI 143
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
MY KCG ++E+ ++F+ M RN VSWN
Sbjct: 144 AMYG--------------------------------KCGLVEEAVKVFEHMPERNLVSWN 171
Query: 191 SMISGYVRNVKFKEALELFREM--QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
S+I G+ N +E+ FREM E++ P T+V++L CA I +G +H V
Sbjct: 172 SIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAV 231
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
+V ++IDMY KC A +F+ KK + WNSM+ G A E + +
Sbjct: 232 KLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYA---REEDVCR 288
Query: 309 LFSGLQ-----SSNLKPDYISFIAVLTACNHSGKVNQAKD 343
F LQ + +K D + + VL C ++ K+
Sbjct: 289 TFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKE 328
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 7/254 (2%)
Query: 151 TEF--DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
T+F D V +I + CG +SR +FDK+ +N WN+++S Y RN F++A+ +
Sbjct: 28 TQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSI 87
Query: 209 FREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
F E+ KP FT+ ++ ACA L + G+ IH + V A+I MY
Sbjct: 88 FSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYG 147
Query: 268 KCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL--QSSNLKPDYISF 325
KCG E A++VF +P++ L WNS++ G + NG+ E+ F + + PD +
Sbjct: 148 KCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATL 207
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
+ VL C + + L + + + + ++D + L EA+ L+
Sbjct: 208 VTVLPVCAGEEDIEKGMAVHGLAVK-LGLNEELMVNNSLIDMYSKCRFLSEAQ-LLFDKN 265
Query: 386 SDPDAIIWGSLLSA 399
+ + W S++
Sbjct: 266 DKKNIVSWNSMIGG 279
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 163/489 (33%), Positives = 265/489 (54%), Gaps = 34/489 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K IH IK G + + LA + G +Y +F +++ P++ W T+I + Q
Sbjct: 245 KAIHTQTIKQGFDESSFVIN-TLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQ 303
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+A+ F M S + P + T+ ++ + A L A+ G Q+HG V++ GL
Sbjct: 304 MGEEEHAVEAFKRMR-KSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALS 362
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N+II +Y+ KCG + + +F + +
Sbjct: 363 VANSIITLYS--------------------------------KCGLLKSASLVFHGITRK 390
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SW+++IS Y + KEA + M+ + KP+EF + S+L+ C + + QG+ +H
Sbjct: 391 DIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVH 450
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
L+ + +V +AII MY KCG + A ++FN + + W +M+ G A +GY
Sbjct: 451 AHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQ 510
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EAI LF + S LKPDY+ FI VLTACNH+G V+ YF LMT Y+I PS +HY C+
Sbjct: 511 EAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCL 570
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
+D L RAG L EAE +IRSMP D ++W +LL ACR HG+++ + A+Q+++LD N +
Sbjct: 571 IDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSA 630
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
++ ++N+YAA +++EA R LMK + KE G S + V+ +++ FVAG + HP++
Sbjct: 631 GTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQSE 690
Query: 485 EVYLLLNDL 493
+ +L L
Sbjct: 691 HITTVLKLL 699
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 34/299 (11%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + A +F ++ + W T+I G+ +S A++LF +M V Q +
Sbjct: 71 GQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVA 130
Query: 95 FKAYAQLGLAR-DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
KA A LG+ G LHG VK GL F+ + +I MY
Sbjct: 131 LKACA-LGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYM------------------- 170
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
K G+I++ R+F+KM++RN VSW ++I+G V E L F EM
Sbjct: 171 -------------KVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMW 217
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ T L A A + G+ IH + F+ ++ V+ + MY KCG P+
Sbjct: 218 RSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPD 277
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
+++F + + W +++ G E A++ F ++ S + P+ +F AV+++C
Sbjct: 278 YVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSC 336
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 11/263 (4%)
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
NS + L K G++ ++R +FDKM R+ +SW ++I+GYV EAL LF M
Sbjct: 61 NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGP 120
Query: 219 PSEFTMVSL-LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQ 277
+ M+S+ L ACA I GE +H F V + + V +A+IDMY K G E+ +
Sbjct: 121 QRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCR 180
Query: 278 VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK 337
VF + + + W +++ GL GY E + FS + S + D +F L A S
Sbjct: 181 VFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSL 240
Query: 338 VNQAKDYFTLMTETYKIKPSIKHYSCMVDALG----RAGLLEEAEKLIRSMPSDPDAIIW 393
++ K + T+T IK S +++ L + G + +L M PD + W
Sbjct: 241 LHHGK---AIHTQT--IKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRM-PDVVSW 294
Query: 394 GSLLSACRKHGNIEMAKQAAKQI 416
+L+S + G E A +A K++
Sbjct: 295 TTLISTYVQMGEEEHAVEAFKRM 317
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 267/482 (55%), Gaps = 35/482 (7%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++HAH++K GL P+ + ++ + + ++ VF + K + W+++I F+Q+
Sbjct: 46 QLHAHILKFGLQTIPLVSHNLINLYSKTQLPL-FSLQVFDETPKKSSTTWSSVISAFAQN 104
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
P A+ F ML ++P YPS KA L + G +H VK G D F+
Sbjct: 105 EAPLLALQFFRRML-NDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
++++ MYA KCGEI ++R LFD+M RN
Sbjct: 164 GSSLVDMYA--------------------------------KCGEIGDARHLFDEMPERN 191
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSW+ MI GY + EAL LF++ +++ ++FT S++ C+ + G+ IH
Sbjct: 192 VVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHG 251
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+ F+ ++ V +A+I +Y KCG E A QVF+ +P + L WNSM+ A + +
Sbjct: 252 LCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQR 311
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
LF + + +KP++ISF++VL AC+H+G V + ++YF+LM + Y I+P +HY+ +V
Sbjct: 312 VFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLV 370
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAG L+EA +I+ MP P +WG+LL+ CR H + EMA A +I+E+D + S
Sbjct: 371 DLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSG 430
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
+VL+SN YAA+ ++EEA R ++++ ++KE G S +E +VH F AG R H K E
Sbjct: 431 LHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVE 490
Query: 486 VY 487
+Y
Sbjct: 491 IY 492
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 8/185 (4%)
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
EQN + + +LL + + ++RQG +H ++ + +V +I++Y K P
Sbjct: 22 EQNYR----QICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPL 77
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+LQVF+ PKK + W+S++ A N A++ F + + ++PD + + AC
Sbjct: 78 FSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACG 137
Query: 334 HSGKVNQAKDYFTLMTET-YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+ + K L +T Y + S +VD + G + +A L MP + + +
Sbjct: 138 FLRRSDVGKSVHCLAVKTGYYCDVFVG--SSLVDMYAKCGEIGDARHLFDEMP-ERNVVS 194
Query: 393 WGSLL 397
W ++
Sbjct: 195 WSGMI 199
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 104/245 (42%), Gaps = 16/245 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K IH +K S +++ S G I AY VF +I NL +WN+++ +Q
Sbjct: 247 KLIHGLCLKMSFDSSSFVGSALISL-YSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQ 305
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ + LF +M ++P +++ S+ A + GL G + + G+E +
Sbjct: 306 HAHTQRVFGLFEEM-GNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETE 364
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ +++ + G L EA + ++ W +++ G + + + + D+++
Sbjct: 365 HYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEM 424
Query: 185 NTVSWNSMI---SGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ S + + Y +++EA + + ++++ +K L + +G
Sbjct: 425 DSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKE-----------TGLSWVEEGN 473
Query: 242 WIHNF 246
+H F
Sbjct: 474 KVHTF 478
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 158/470 (33%), Positives = 269/470 (57%), Gaps = 33/470 (7%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ G + A +F ++++ N+ W+ +I + R A+ LF M+++S + P ++T
Sbjct: 177 AKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLF-RMMLSSGMLPDKITL 235
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
SL A + L + G +H V K GL+ D F+ ++ MY
Sbjct: 236 ASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYG----------------- 278
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
KC EI+++R LFDKM R+ V+W MI GY E+L LF +
Sbjct: 279 ---------------KCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDK 323
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M+E+ + P + MV+++ ACAKLGA+ + I +++ F+L+ I+ TA+IDM+ KCGC
Sbjct: 324 MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 383
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
E A ++F+ + +K + W++M+ +G +A+ LF + S + P+ I+ +++L A
Sbjct: 384 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYA 443
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C+H+G V + +F+LM E Y ++ +KHY+C+VD LGRAG L+EA KLI SM + D
Sbjct: 444 CSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEG 503
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+WG+ L ACR H ++ +A++AA ++EL Y+L+SN+YA + ++E+ + R LM
Sbjct: 504 LWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMS 563
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+ +++K PG + IEVD + H+F G HP++ E+Y +L LG ++ +G
Sbjct: 564 QRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVG 613
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 180/373 (48%), Gaps = 45/373 (12%)
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
++ GF++ N F + L+ +P T P + +A L + G +H V K
Sbjct: 1 MVGGFAKVGDYINCFGTFRE-LIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKF 59
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GL+ D F+ ++ MY KC EI+++R L
Sbjct: 60 GLDLDHFVCAALVDMYV--------------------------------KCREIEDARFL 87
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FDKM R+ V+W MI GY K E+L LF +M+E+ + P + MV+++ ACAKLGA+
Sbjct: 88 FDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAM 147
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
+ I +++ F+L+ I+ TA+IDMY KCGC E A ++F+ + +K + W++M+
Sbjct: 148 HKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAY 207
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
+G +A+ LF + SS + PD I+ ++L AC+ + + + YK
Sbjct: 208 GYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGR---LIHHIVYKFGLD 264
Query: 358 IKHYSC--MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
+ H+ C +VD G+ +E+A L MP + D + W ++ + GN A +
Sbjct: 265 LDHFVCAALVDMYGKCREIEDARFLFDKMP-ERDLVTWTVMIGGYAECGN------ANES 317
Query: 416 IIELDKNESCGYV 428
++ DK G V
Sbjct: 318 LVLFDKMREEGVV 330
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 175/323 (54%), Gaps = 11/323 (3%)
Query: 89 LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE 148
+T+ + YA+ G A + L ++ ++G+ D+ T+++ A G + +AR++ D
Sbjct: 97 VTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDY 156
Query: 149 VDT---EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEA 205
+ + DV+ +MI AKCG ++ +R +FD+M +N +SW++MI+ Y + + ++A
Sbjct: 157 IQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 216
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
L+LFR M + P + T+ SLL AC+ L ++ G IH+ + +L+ V A++DM
Sbjct: 217 LDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDM 276
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y KC E A +F+ +P++ L W M+ G A G NE++ LF ++ + PD ++
Sbjct: 277 YGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAM 336
Query: 326 IAVLTACNHSGKVNQAK---DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
+ V+ AC G +++A+ DY + K + + + M+D + G +E A ++
Sbjct: 337 VTVVFACAKLGAMHKARTIDDYI----QRKKFQLDVILGTAMIDMHAKCGCVESAREIFD 392
Query: 383 SMPSDPDAIIWGSLLSACRKHGN 405
M + + I W ++++A HG
Sbjct: 393 RM-EEKNVISWSAMIAAYGYHGQ 414
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 277/498 (55%), Gaps = 36/498 (7%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + +K GL K+ + ++ G + A VF ++ +L WN+II G Q
Sbjct: 191 MHVYAVKHGLDKELFVCNALIDV-YGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRG 249
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A+ +F M S + P LT SL A AQ G R LH V+++G + D
Sbjct: 250 QTAAALKMFQGMR-GSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVD---- 304
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
D++A N+++ AK I+ ++R+FD M +++
Sbjct: 305 ---------------------------DIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDS 337
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSWN++I+GY++N EA+E + MQ+ + +K + T VS+L A + LGA++QG +H
Sbjct: 338 VSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHA 397
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+ ++ V T +ID+Y KCG A+ +F +P++ WN+++ GL ++G+ E
Sbjct: 398 LSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAE 457
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+ LFS +Q +KPD+++F+++L AC+H+G V+Q + +F +M TY I P KHY+CM
Sbjct: 458 ALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMA 517
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAG L+EA I++MP PD+ +WG+LL ACR HGN+EM K A++ + ELD
Sbjct: 518 DMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVG 577
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL--HPKA 483
YVLMSN+YA +++ E R L++ ++K PG S IEV V+ F +G + HP+
Sbjct: 578 YYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQH 637
Query: 484 PEVYLLLNDLGLLIQEMG 501
E+ L L I+ +G
Sbjct: 638 EEIQAELRSLLAKIRSVG 655
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 175/370 (47%), Gaps = 41/370 (11%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTS-PIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
NT+I FS+++ PR A L +L + P +P T+PSL +A A AQLH
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNASA---AQLHACA 93
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
++ GL + ++ G L A L F G I E+
Sbjct: 94 LRLGL-----VRPSVF----TSGSLVHAYLRF----------------------GRISEA 122
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
++FD+M R+ +WN+M+SG RN + EA+ LF M + + T+ S+L C L
Sbjct: 123 YKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLL 182
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G +H + V + + V A+ID+Y K G E A VF+ + + L WNS++
Sbjct: 183 GDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSII 242
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYK 353
G G A+K+F G++ S + PD ++ +++ +A G AK + +M +
Sbjct: 243 SGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWD 302
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
+ I + +VD + +E A+++ SMP D++ W +L++ ++G +A +A
Sbjct: 303 VDDIIAG-NAIVDMYAKLSNIEAAQRMFDSMPVQ-DSVSWNTLITGYMQNG---LANEAV 357
Query: 414 KQIIELDKNE 423
++ + K+E
Sbjct: 358 ERYGHMQKHE 367
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 161/386 (41%), Gaps = 74/386 (19%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+ K +H ++++ G D I A + + +I A +F + + WNT+I G
Sbjct: 287 RSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITG 346
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ Q+ A+ + M ++ + T+ S+ AY+ LG + G ++H +K GL
Sbjct: 347 YMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNV 406
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D ++ +I +YA CG L+EA L+F+++ WN++I GL G
Sbjct: 407 DVYVGTCLIDLYAKCGKLAEAMLLFEKMPRR-STGPWNAIISGLGVHGH----------- 454
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
EAL LF MQ++ IKP T VSLL AC+ G + QG
Sbjct: 455 --------------------GAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGR 494
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMN 300
+ F++ + ++ VP K +C M L
Sbjct: 495 --------SFFDVMQV--------------------TYDIVPIAKHYACMADM---LGRA 523
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP-SIK 359
G +EA F+ +Q+ +KPD + A+L AC G V K +++ P ++
Sbjct: 524 GQLDEA---FNFIQNMPIKPDSAVWGALLGACRIHGNVEMGK---VASQNLFELDPENVG 577
Query: 360 HYSCMVDALGRAGL---LEEAEKLIR 382
+Y M + + G ++E L+R
Sbjct: 578 YYVLMSNMYAKVGKWDGVDEVRSLVR 603
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 261/457 (57%), Gaps = 38/457 (8%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
+N A+ +F Q+ + N+ W T+I +S+ + A+ L + ML ++P TY S+ +
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML-RDNVRPNVYTYSSVLR 170
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
+ + D LH ++K+GLE D F+ + +I ++A
Sbjct: 171 SCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFA---------------------- 205
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
K GE +++ +FD+MV+ + + WNS+I G+ +N + ALELF+ M+
Sbjct: 206 ----------KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG 255
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+ T+ S+L AC L + G H +V ++ + I+ A++DMYCKCG E AL
Sbjct: 256 FIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDAL 313
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
+VFN + ++ + W++M+ GLA NGY EA+KLF ++SS KP+YI+ + VL AC+H+G
Sbjct: 314 RVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAG 373
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
+ YF M + Y I P +HY CM+D LG+AG L++A KL+ M +PDA+ W +L
Sbjct: 374 LLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTL 433
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
L ACR N+ +A+ AAK++I LD ++ Y L+SN+YA S +++ E R M++ I+
Sbjct: 434 LGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIK 493
Query: 457 KEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
KEPGCS IEV+ ++H F+ G HP+ EV LN L
Sbjct: 494 KEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
A++ +Q + T L+ C A+ +G I L N +V +I
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
+MY K A Q+F+ +P++ + W +M+ + +A++L + N++P+
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
++ +VL +CN V + ++ E + ++ S ++D + G E+A +
Sbjct: 164 TYSSVLRSCNGMSDVRML--HCGIIKEGLESDVFVR--SALIDVFAKLGEPEDALSVFDE 219
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
M + DAI+W S++ ++ ++A + K++
Sbjct: 220 MVTG-DAIVWNSIIGGFAQNSRSDVALELFKRM 251
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 181/565 (32%), Positives = 287/565 (50%), Gaps = 82/565 (14%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTS-------PAGDINYAYLVFTQIKKPNLFIWN 56
L +IHA +++ L + + + C S P IN+A F + F+ N
Sbjct: 33 LLQIHAFILRHSLHSNLNLLTAFVTTCASLAASAKRPLAIINHARRFFNATHTRDTFLCN 92
Query: 57 TII------RGFSQSSTPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQLGLARDGAQ 109
++I R FSQ T LF D+ +P P T+ +L K A +G
Sbjct: 93 SMIAAHFAARQFSQPFT------LFRDLRRQAPPFTPDGYTFTALVKGCATRVATGEGTL 146
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMY-------------------------------ANCGF 138
LHG V+K G+ FD ++ ++ MY A CG
Sbjct: 147 LHGMVLKNGVCFDLYVATALVDMYVKFGVLGSARKVFDEMSVRSKVSWTAVIVGYARCGD 206
Query: 139 LSEARLMFDEVDT------------------------------EFDVVAWNSMIIGLAKC 168
+SEAR +FDE++ E +VV+W SM+ G
Sbjct: 207 MSEARRLFDEMEDRDIVAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGYCGN 266
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G+++ ++ +FD M +N +WN+MI GY +N + +ALELFREMQ +++P+E T+V +L
Sbjct: 267 GDVENAKLMFDLMPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVCVL 326
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
A A LGA+ G WIH F + + + + TA+IDMY KCG +A F + ++ +
Sbjct: 327 PAVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTERETA 386
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN+++ G A+NG EA+++F+ + P+ ++ I VL+ACNH G V + + +F M
Sbjct: 387 SWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRWFNAM 446
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
E + I P ++HY CMVD LGRAG L+EAE LI++MP D + II S L AC ++
Sbjct: 447 -ERFGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLFACGYFNDVLR 505
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
A++ K+++++D++ + YV++ NLYA ++ + + + +MK+ KE CS+IE+ G
Sbjct: 506 AERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVACSVIEIGG 565
Query: 469 EVHEFVAGGRLHPKAPEVYLLLNDL 493
EF AG LH + L L L
Sbjct: 566 SFIEFAAGDYLHSHLEVIQLTLGQL 590
>gi|326498517|dbj|BAJ98686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 259/440 (58%), Gaps = 17/440 (3%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYP-- 92
G + A VF + + ++F W +I F ++ A+ +F M +R +P
Sbjct: 214 GMVEEARGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCM--------RREMWPVD 265
Query: 93 -----SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFD 147
S+ A AQ + R+G HG V++ GL I N +I+MY+ C + AR +FD
Sbjct: 266 EALMVSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFD 325
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
D D +WNSMI G K G ++ + LF M ++ VSW++MISG V+N + AL
Sbjct: 326 SGDC-LDQFSWNSMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGCVQNNQSSHALT 384
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
+F M+ Q ++P E T+VS+++AC L A+ +G+ +H+++ N + ++ T++IDMY
Sbjct: 385 VFDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLVLGTSLIDMYM 444
Query: 268 KCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK-PDYISFI 326
KCG E A+ VFN + +KG CWN+++ GLAMNG +++++FS +++S+ P+ I+F
Sbjct: 445 KCGYLEAAMDVFNIMEEKGAPCWNAVIVGLAMNGLVTKSLEIFSEMEASSTAIPNEITFT 504
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
VL+AC H+G V + + +F LM Y+I P+I+HY CMVD LGRAG ++EAE LI SMP
Sbjct: 505 GVLSACRHAGLVEEGRHFFKLMQHKYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIESMPM 564
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
PD WG+LL AC KHG E+ ++ ++++ LD ++SN+YA ++ +
Sbjct: 565 SPDVPAWGALLGACWKHGENEVGERVGRKLVNLDPRHDGFQTMLSNIYAKEGMWQSVNDL 624
Query: 447 RLLMKEVKIEKEPGCSLIEV 466
R MK+ + K G S++E+
Sbjct: 625 RDSMKQRHVPKVSGYSVVEM 644
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 223/510 (43%), Gaps = 104/510 (20%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSP---AGDINYAYLVFTQIKKPNLFIWNT 57
++ L +IH I +GL D AASR+L F ++ I++++ + ++ PN F NT
Sbjct: 17 VRHLLQIHGQFIASGLLADAFAASRLLLFTSATRLLPFPIHHSFRLLRLVRCPNAFSCNT 76
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+++ + P + L+ + P P T+P L A A +G Q+ ++
Sbjct: 77 LLKAALLAGMPHLCLPLYTSL----PASPDTYTHPILAAACAARRDVSEGRQVQSHAIRH 132
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID----- 172
G D ++ N +++MY+ CG L +AR +FD +D V+WN+++ G++D
Sbjct: 133 GFGDDLYLRNALMHMYSVCGCLWDARRVFD-AGPVWDAVSWNTILAAYVHAGDVDQAVGV 191
Query: 173 --------------------------ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEAL 206
E+R +FD+ R+ +W +MIS + RN F EAL
Sbjct: 192 FARMPKRNATAVSSMVSLFGRRGMVEEARGVFDEAECRDIFTWTAMISCFERNDMFAEAL 251
Query: 207 ELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV------------------ 248
+F M+ + E MVS++ ACA+ IR GE H ++
Sbjct: 252 HMFSCMRREMWPVDEALMVSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMY 311
Query: 249 TNCFE-------------LNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+ C + L+ ++I Y K G E A+ +F+ +P K W++M+
Sbjct: 312 SCCLDVVAARRLFDSGDCLDQFSWNSMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMIS 371
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH-----SGK-----VNQAKDYF 345
G N + A+ +F +++ ++PD ++ ++V++AC + GK V Q K Y
Sbjct: 372 GCVQNNQSSHALTVFDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYI 431
Query: 346 TLMTETYKIKPSIK--------------------HYSCMVDALGRAGLLEEAEKLIRSMP 385
TL+ T I +K ++ ++ L GL+ ++ ++ M
Sbjct: 432 TLVLGTSLIDMYMKCGYLEAAMDVFNIMEEKGAPCWNAVIVGLAMNGLVTKSLEIFSEME 491
Query: 386 SD----PDAIIWGSLLSACRKHGNIEMAKQ 411
+ P+ I + +LSACR G +E +
Sbjct: 492 ASSTAIPNEITFTGVLSACRHAGLVEEGRH 521
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 106/310 (34%), Gaps = 72/310 (23%)
Query: 89 LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE 148
LT L A+ R Q+HG+ + GL D F + ++ F S RL+
Sbjct: 2 LTVSLLDAQLARCSSVRHLLQIHGQFIASGLLADAFAASRLLL------FTSATRLLPFP 55
Query: 149 VDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
+ F RL + N S N+++ + L L
Sbjct: 56 IHHSF----------------------RLLRLVRCPNAFSCNTLLKAALLAGMPHLCLPL 93
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
+ + P +T L ACA + +G + + + + F + + A++ MY
Sbjct: 94 YTSLPA---SPDTYTHPILAAACAARRDVSEGRQVQSHAIRHGFGDDLYLRNALMHMYSV 150
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
CGC A +VF+ P WN+ +
Sbjct: 151 CGCLWDARRVFDAGPVWDAVSWNT-----------------------------------I 175
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L A H+G V+QA F M K + S MV GR G++EEA +
Sbjct: 176 LAAYVHAGDVDQAVGVFARMP-----KRNATAVSSMVSLFGRRGMVEEARGVFDEAECR- 229
Query: 389 DAIIWGSLLS 398
D W +++S
Sbjct: 230 DIFTWTAMIS 239
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 268/448 (59%), Gaps = 14/448 (3%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDML-----VTSPIQPQRL 89
G ++ A VF + ++F W +I F ++ A+ +F M V P+
Sbjct: 214 GMVDEARRVFDAAECRDIFTWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMV--- 270
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
S+ A AQ + ++G HG V++ GL + N +I+MY++C + AR +FD
Sbjct: 271 ---SVVSACAQSEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSG 327
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
+ D +WNSMI G K G + ++ LF M +++ VSW+++ISG V+N + +AL +F
Sbjct: 328 EC-LDQYSWNSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVF 386
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
MQ Q I+P E T+VS+++AC L A+ +G+ +H ++ N + ++ ++ T++I+MY KC
Sbjct: 387 DNMQAQGIRPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLGTSLINMYMKC 446
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL-KPDYISFIAV 328
GC E AL+ FN + +KG CWN+++ GLAMNG +++ +FS +++S+ P+ I+F V
Sbjct: 447 GCLEAALEAFNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEMEASDTATPNEITFTGV 506
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L+AC H+G V++ + +F LM Y+I P+I+HY CMVD LGRAG ++EAE +I+SMP P
Sbjct: 507 LSACRHAGLVDEGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKEAEDMIQSMPMSP 566
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D WG+LL AC KHG E+ ++ ++++ D ++SN+YA ++ + R
Sbjct: 567 DVPAWGALLGACWKHGEYEVGERVGRKLVNRDPLHDGFQTMLSNIYAKEGMWQSVDDLRG 626
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
MK+ ++K G S+++ +E +AG
Sbjct: 627 SMKQRHVQKVSGHSVVK-SSHSYEILAG 653
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/512 (24%), Positives = 221/512 (43%), Gaps = 110/512 (21%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSP---AGDINYAYLVFTQIKKPNLFIWNTI 58
+ L +IHA I +GL D AASR+L F ++ +++ + ++ PN F NT+
Sbjct: 18 RHLLQIHAQFIASGLLADAFAASRLLLFTSASRLLPLPFHHSLRLLRLVRYPNAFSCNTL 77
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
++ P + L+ + P P T+P L A A +G Q+H V G
Sbjct: 78 LKSALIGGMPHLCLPLYASL----PAPPDSYTHPILAAACASRKDVIEGRQVHAHAVSHG 133
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN------------------- 159
+ ++ N +I+MY+ CG L +AR +FD +D V+WN
Sbjct: 134 FGDNLYLRNALIFMYSACGCLWDARRVFD-AGPVWDAVSWNTILAAYVHAGDVDQAVEVF 192
Query: 160 ------------SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
SM+ + G +DE+RR+FD R+ +W +MIS + RN F EAL
Sbjct: 193 AQMPKRNATAVSSMVSLFGRRGMVDEARRVFDAAECRDIFTWTAMISCFERNDMFAEALH 252
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTN--CFELNTIVVTAIIDM 265
+F M+ + E MVS+++ACA+ I+ G+ H ++ C ++N V A+I M
Sbjct: 253 VFSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQVN--VQNALIHM 310
Query: 266 YCKC-------------------------------GCPERALQVFNTVPKKGLSCWNSMV 294
Y C G + A+ +F+ +P K W++++
Sbjct: 311 YSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVI 370
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH-----SGK-----VNQAKDY 344
G N ++A+ +F +Q+ ++PD ++ ++V++AC + GK + Q + Y
Sbjct: 371 SGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYY 430
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEA-------------------------EK 379
+L+ T I +K C+ AL ++EE +
Sbjct: 431 VSLVLGTSLINMYMK-CGCLEAALEAFNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSE 489
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ S + P+ I + +LSACR G ++ +
Sbjct: 490 MEASDTATPNEITFTGVLSACRHAGLVDEGRH 521
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 282/497 (56%), Gaps = 22/497 (4%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++ +++H H+ K G D A+ ++ + G ++ A VF ++ + ++NT+I
Sbjct: 120 LREGEQVHVHVFKNGFQTDERIATTLVDL-YARCGRLDDARRVFDRLLVKDAQLYNTMIA 178
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL-----FKAYAQLGLARDGAQLHGRVV 115
+ ++ A LF + P+R T+ + + A + A+ ++ VV
Sbjct: 179 AYMEAGEVELAEELF-------EVMPERNTHTLMEMVGGYSARGDMDSAKHVFEMANGVV 231
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI-IGLAKCGEIDES 174
+ + +I +A G + +AR +FD + + DV WN MI + AKCG ++++
Sbjct: 232 ------NMVLCTAMISGFAKTGSVDDARSVFDGM-RQRDVATWNVMIGVMYAKCGLVEDA 284
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R++FD M RN V W SMISGY + KFK+A++LFR+MQ +K + T+ +++++C ++
Sbjct: 285 RKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQM 344
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA+ G ++H + + V ++IDMY KCG ++A ++F + K+ W M+
Sbjct: 345 GALDLGRYVHAYCDVHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMI 404
Query: 295 FGLAMNGYENEAIKLFSGLQSSN-LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK 353
G A+NG EA+ LF+ ++ + P+ I+F+ VLT+C+H G V Q +F M++ Y
Sbjct: 405 MGFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVYG 464
Query: 354 IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAA 413
I P I+HY CMVD LGRA LL EAE+ I MP PD IW SLL ACR G + +A+ A
Sbjct: 465 IAPRIEHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLLFACRARGEVGLAEYVA 524
Query: 414 KQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
+++ EL+ + G VL+SN+YA + ++ + + R M ++ K PGCS+IEV+G HEF
Sbjct: 525 ERVEELEPSRCGGNVLLSNVYATTSRWVDVNKVRTGMGRSRVSKRPGCSVIEVNGCAHEF 584
Query: 474 VAGGRLHPKAPEVYLLL 490
++G H + +Y +L
Sbjct: 585 LSGDETHLETEAIYNIL 601
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 162/326 (49%), Gaps = 9/326 (2%)
Query: 65 SSTPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
S+ R+A+ L+ M P ++P T S+ KA A+ + R+G Q+H V K G + D+
Sbjct: 80 SAAARDAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDE 139
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
I T++ +YA CG L +AR +FD + + D +N+MI + GE++ + LF+ M
Sbjct: 140 RIATTLVDLYARCGRLDDARRVFDRLLVK-DAQLYNTMIAAYMEAGEVELAEELFEVMPE 198
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
RNT + M+ GY A +F EM + T ++++ AK G++ +
Sbjct: 199 RNTHTLMEMVGGYSARGDMDSAKHVF-EMANGVVNMVLCT--AMISGFAKTGSVDDARSV 255
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
+ + +++ MY KCG E A +VF+ +P++ + CW SM+ G G
Sbjct: 256 FDGMRQRDVATWNVMIGV---MYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKF 312
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+A+KLF +Q S +K D + V+++C G ++ + Y + + + I +
Sbjct: 313 KQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLGR-YVHAYCDVHGLGKGISVKNS 371
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPD 389
++D + G +++A ++ R + D
Sbjct: 372 LIDMYSKCGDIKKAHEIFRGLVKRDD 397
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 38/242 (15%)
Query: 203 KEALELFREMQEQ--NIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
++A+ L+ +M ++P FT+ S+L A A+ +R+GE +H + N F+ + + T
Sbjct: 84 RDAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTDERIAT 143
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
++D+Y +CG + A +VF+ + K +N+M+ G A +LF + N
Sbjct: 144 TLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEVMPERNTH- 202
Query: 321 DYISFIAVLTACNHSGKVNQAKDYF------------TLMTETYKIKPSIKHYSCMVDAL 368
+ + ++ + G ++ AK F T M + S+ + D +
Sbjct: 203 ---TLMEMVGGYSARGDMDSAKHVFEMANGVVNMVLCTAMISGFAKTGSVDDARSVFDGM 259
Query: 369 ----------------GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+ GL+E+A K+ +MP + + + W S++S + G KQA
Sbjct: 260 RQRDVATWNVMIGVMYAKCGLVEDARKVFDAMP-ERNVVCWTSMISGYTQVGKF---KQA 315
Query: 413 AK 414
K
Sbjct: 316 VK 317
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 172/490 (35%), Positives = 273/490 (55%), Gaps = 35/490 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+ ++H H ++TGL D S + G I+ A L+F ++ ++ WN +I G +
Sbjct: 543 VNEVHKHAVETGLISDFRVGSAFIHMYIR-CGSIDDARLLFDKLSVRHVTTWNAMIGGAA 601
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
Q R A+ LF+ M I P T+ ++ A V ++ LE+ +
Sbjct: 602 QQRCGREALSLFLQMQREGFI-PDATTFINILSA---------------NVDEEALEWVK 645
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+H+ ++A L+ D+ N+++ +KCG + ++++FD MV
Sbjct: 646 EVHS----------HATDAGLV--------DLRVGNALVHTYSKCGNVKYAKQVFDDMVE 687
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
RN +W MI G ++ +A F +M + I P T VS+L+ACA GA+ + +
Sbjct: 688 RNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEV 747
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
HN V+ + V A++ MY KCG + A VF+ + ++ + W M+ GLA +G
Sbjct: 748 HNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRG 807
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ F ++S KP+ S++AVLTAC+H+G V++ + F MT+ Y I+P+++HY+C
Sbjct: 808 LEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTC 867
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAGLLEEAE I +MP +PD WG+LL AC +GN+EMA+ AAK+ ++L
Sbjct: 868 MVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKS 927
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
+ YVL+SN+YAA+ ++E+ + R +M+ I KEPG S IEVD +H FV G HP++
Sbjct: 928 ASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPES 987
Query: 484 PEVYLLLNDL 493
E+Y LNDL
Sbjct: 988 KEIYAQLNDL 997
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 193/403 (47%), Gaps = 40/403 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H +IK+G+ ++ A+++L G + A VF ++ K N++IW T+I G+++
Sbjct: 138 KQVHVCIIKSGMEQNLYVANKLLRVYIR-CGRLQCARQVFDKLLKKNIYIWTTMIGGYAE 196
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+A+ ++ D + QP +TY S+ KA + G ++H +++ G + D
Sbjct: 197 YGHAEDAMRVY-DKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVR 255
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MY KCG I++++ +FDKMV R
Sbjct: 256 VETALVNMYV--------------------------------KCGSIEDAQLIFDKMVER 283
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N +SW MI G + +EA LF +MQ + P+ +T VS+LNA A GA+ + +H
Sbjct: 284 NVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVH 343
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ V L+ V A++ MY K G + A VF+ + ++ + W M+ GLA +G
Sbjct: 344 SHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQ 403
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM---TETYKIKPSIKHY 361
EA LF +Q + P+ +++++L A + A ++ ++ E ++
Sbjct: 404 EAFSLFLQMQRNGCLPNLTTYLSILNASAIAS--TSALEWVKVVHKHAEEAGFISDLRIG 461
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ ++ + G +++A + M D D I W +++ ++G
Sbjct: 462 NALIHMYAKCGSIDDARLVFDGM-CDRDVISWNAMMGGLAQNG 503
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 196/451 (43%), Gaps = 74/451 (16%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+K++H+H + GLA D + L + +G I+ A +VF + + ++F W +I G +
Sbjct: 339 VKEVHSHAVNAGLALD-LRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLA 397
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
Q + A LF+ M + P TY S+ A A +A A LE+ +
Sbjct: 398 QHGRGQEAFSLFLQMQRNGCL-PNLTTYLSILNASA---IASTSA----------LEWVK 443
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+H GF+S+ R+ N++I AKCG ID++R +FD M
Sbjct: 444 VVHKHA----EEAGFISDLRIG-------------NALIHMYAKCGSIDDARLVFDGMCD 486
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ +SWN+M+ G +N EA +F +MQ++ + P T +SLLN A+ +
Sbjct: 487 RDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEV 546
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H V + V +A I MY +CG + A +F+ + + ++ WN+M+ G A
Sbjct: 547 HKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCG 606
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTA-------------CNHS--------------- 335
EA+ LF +Q PD +FI +L+A +H+
Sbjct: 607 REALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALV 666
Query: 336 ------GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD-- 387
G V AK F M E ++ ++ M+ L + G +A M +
Sbjct: 667 HTYSKCGNVKYAKQVFDDMVER-----NVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGI 721
Query: 388 -PDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
PDA + S+LSAC G +E K+ +
Sbjct: 722 VPDATTYVSILSACASTGALEWVKEVHNHAV 752
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 102/205 (49%), Gaps = 2/205 (0%)
Query: 200 VKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV 259
+ K+A+ + + +Q I F+ V++L C K I + +H ++ + E N V
Sbjct: 97 ITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVA 156
Query: 260 TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK 319
++ +Y +CG + A QVF+ + KK + W +M+ G A G+ +A++++ ++ +
Sbjct: 157 NKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQ 216
Query: 320 PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
P+ I+++++L AC + K + ++ + ++ + +V+ + G +E+A+
Sbjct: 217 PNEITYLSILKACCCPVNLKWGKKIHAHIIQS-GFQSDVRVETALVNMYVKCGSIEDAQL 275
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHG 404
+ M + + I W ++ +G
Sbjct: 276 IFDKMV-ERNVISWTVMIGGLAHYG 299
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 276/497 (55%), Gaps = 36/497 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H+ I++GLA D + + S G ++ VF +++ ++ W +I G+ Q
Sbjct: 289 RQLHSWAIRSGLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQ 348
Query: 65 S-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ + AI LF +M+ ++P T+ S FKA + R G Q+ G K+GL +
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNS 408
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ N++I M+ KC ++++R F+ +
Sbjct: 409 SVSNSVISMFV--------------------------------KCDRMEDARTAFESLSE 436
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+N VS+N+ + G RN+ F+ A EL E+ E+ + S FT SLL+ A +G++R+GE I
Sbjct: 437 KNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQI 496
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H+ ++ N V A+I MY KCG + A +VF+ + + + W SM+ G A +G+
Sbjct: 497 HSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFA 556
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
++ F+ + +KP+ ++++A+L+AC+H G V++ +F M E +KIKP ++HY+C
Sbjct: 557 ERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD L RAGLL +A + I +MP D ++W + L ACR H N E+ K AA++I+E D NE
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNE 676
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
Y+ +SN+YA++ ++EE+ E R MKE + KE GCS IEV +VH+F G HP A
Sbjct: 677 PAAYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNA 736
Query: 484 PEVYLLLNDLGLLIQEM 500
++Y ++L LI E+
Sbjct: 737 HQIY---DELDWLITEI 750
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 154/339 (45%), Gaps = 44/339 (12%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFT---QIKKPNLFIWNTIIRG 61
K +HA LI+ + D + + +++ S +GD+ A VF + K ++ W+ ++
Sbjct: 82 KLVHARLIEFEIEPDSVLYNSLISL-YSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMAC 140
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LE 120
F + +AI LF++ L + P Y ++ +A + G + G ++K G E
Sbjct: 141 FGNNGREFDAIKLFVEFLEMGLV-PNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFE 199
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + ++I M+ V NS + + ++FDK
Sbjct: 200 SDVCVGCSLIDMF---------------------VKGENS----------FENAYKVFDK 228
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M N V+W MI+ ++ +EA+ F +M + +FT+ S+ +ACA+L + G
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKC---GCPERALQVFNTVPKKGLSCWNSMVFGL 297
+H++ + + L V +++DMY KC G + +VF+ + + W +++ G
Sbjct: 289 RQLHSWAIRS--GLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGY 346
Query: 298 AMN-GYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNH 334
N EAI LFS + +++P++ +F + AC +
Sbjct: 347 MQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
gi|219884683|gb|ACL52716.1| unknown [Zea mays]
gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
Length = 601
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/498 (34%), Positives = 288/498 (57%), Gaps = 13/498 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+ H H + G+ D + ++ F + G+++ A + F ++ + N +I G+S+S
Sbjct: 99 QTHCHALVRGMLGDVFVQTALVDF-YAKNGNMDSAVMAFEEMPIKDPIPMNCLITGYSRS 157
Query: 66 STPRNAILLFIDMLVTSPIQPQRLT--YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
A LF M P++ + + S+ YA G ++ L +++++G +
Sbjct: 158 GDVEEARRLFDSM-------PRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNA 210
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTE--FDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
T+ + A G L R V E +V+ +++ KC IDE+RR FD+M
Sbjct: 211 ITITTVFSICAKTGDLETGRRAKAWVSEEDLQNVIVHTALMEMYVKCRAIDEARREFDRM 270
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ V+W++MI+GY N + E+LELF M+ N KP+E T+V +L+ACA+LG+ GE
Sbjct: 271 PRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGE 330
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
I +++ + L + + +A+IDMY KCG RA VF+ + +K + WNSM+ GLA+NG
Sbjct: 331 QIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNG 390
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK-IKPSIKH 360
+ +AI L+ + ++P+ I+F+A+LTAC H+G V++ +F M + + P ++H
Sbjct: 391 FAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEH 450
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+C+VD L ++G L EA K I M +P+A+IW +LLSACR H ++E+AK AA +++ L+
Sbjct: 451 CACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVLE 510
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
N S YVL+SN+YA + + + E R LM+ ++K S IE+DGEVH F+ H
Sbjct: 511 PNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYH 570
Query: 481 PKAPEVYLLLNDLGLLIQ 498
P++ E+Y +++ LGL ++
Sbjct: 571 PRSAEIYNVVDGLGLQLE 588
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 175/354 (49%), Gaps = 45/354 (12%)
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
P + K+ A + G Q H + +G+ D F+ ++ YA G + A + F+E+
Sbjct: 82 PLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPI 141
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ D + N +I G ++ G+++E+RRLFD M + + SWNSMI+ Y +F+EAL LF +
Sbjct: 142 K-DPIPMNCLITGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQ 200
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + P+ T+ ++ + CAK G + G ++ + N IV TA+++MY KC
Sbjct: 201 MLREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVKCRA 259
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ A + F+ +P++ + W++M+ G + NG +E+++LF ++++N KP+ ++ + VL+A
Sbjct: 260 IDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSA 319
Query: 332 C-----------------------------------NHSGKVNQAKDYFTLMTETYKIKP 356
C G V +A+D F M + I
Sbjct: 320 CAQLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIA- 378
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIE 407
++ M+ L G E+A L M D P+ I + +LL+AC G ++
Sbjct: 379 ----WNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVD 428
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 104/270 (38%), Gaps = 38/270 (14%)
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R LFD + + +S + +E +E + + + +L +CA
Sbjct: 31 ARHLFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCIPLVLKSCAL 90
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK------------------------- 268
A QG H + + V TA++D Y K
Sbjct: 91 SAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCL 150
Query: 269 ------CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
G E A ++F+++P+K + WNSM+ A G EA+ LF + P+
Sbjct: 151 ITGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNA 210
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
I+ V + C +G + + ++E ++ I H + M + + ++EA +
Sbjct: 211 ITITTVFSICAKTGDLETGRRAKAWVSEE-DLQNVIVHTALM-EMYVKCRAIDEARREFD 268
Query: 383 SMPSDPDAIIWGSLLSA----CRKHGNIEM 408
MP D + W ++++ R H ++E+
Sbjct: 269 RMPRR-DVVAWSTMIAGYSHNGRPHESLEL 297
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 277/503 (55%), Gaps = 36/503 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKD-PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
M+ K +HA++I+ + + + L + G + A +F + + + W +I
Sbjct: 211 MRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMI 270
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G +S+ LFI M I P +T SL G + G QLH +++ G
Sbjct: 271 AGCIRSNRLEEGTKLFIRMQ-EENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGF 329
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ ++ MY KC +I +R LFD
Sbjct: 330 SVSLALATALVDMYG--------------------------------KCSDIRNARALFD 357
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+R+ + W +M+S Y + +A LF +M+ ++P++ T+VSLL+ CA GA+
Sbjct: 358 STQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDL 417
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+W+H+++ E++ I+ TA++DMY KCG A ++F + + WN+++ G AM
Sbjct: 418 GKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAM 477
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+GY EA+ +F+ ++ +KP+ I+FI +L AC+H+G V + K F M T+ + P I+
Sbjct: 478 HGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIE 537
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAGLL+EA ++I+SMP P+ I+WG+L++ACR H N ++ + AA Q++E+
Sbjct: 538 HYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEI 597
Query: 420 DKNESCGY-VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
+ E+CGY VLMSN+YAA+ ++ +A R MK V ++KEPG S+IEV+G VHEF+ G +
Sbjct: 598 EP-ENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQ 656
Query: 479 LHPKAPEVYLLLNDLGLLIQEMG 501
HP+ + +L ++ + E G
Sbjct: 657 SHPQIRRINEMLAEMRRKLNEAG 679
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 157/320 (49%), Gaps = 36/320 (11%)
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
PS+ KA Q+ + G ++HG V+K+GL+ D F+ N ++ MY C
Sbjct: 98 PSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECA-------------- 143
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
C ++ +R +FDKM+ R+ VSW++MI RN +F ALEL RE
Sbjct: 144 ----------------C--VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIRE 185
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV--TNCFELNTIVVTAIIDMYCKC 269
M ++PSE MVS++N A +R G+ +H +++ +N + TA++DMY KC
Sbjct: 186 MNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKC 245
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G A Q+FN + +K + W +M+ G + E KLF +Q N+ P+ I+ ++++
Sbjct: 246 GHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLI 305
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
C +G + K + S+ + +VD G+ + A L S + D
Sbjct: 306 VECGFTGALQLGKQLHAYILRN-GFSVSLALATALVDMYGKCSDIRNARALFDS-TQNRD 363
Query: 390 AIIWGSLLSACRKHGNIEMA 409
+IW ++LSA + I+ A
Sbjct: 364 VMIWTAMLSAYAQANCIDQA 383
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 194/407 (47%), Gaps = 38/407 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH ++K GL +D + ++ A + YA LVF ++ + ++ W+T+IR S+
Sbjct: 114 KEIHGFVLKKGLDRDVFVGNALMLMYGECAC-VEYARLVFDKMMERDVVSWSTMIRSLSR 172
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ L +M ++P + S+ +A R G +H V++
Sbjct: 173 NKEFDMALELIREMNFMQ-VRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG 231
Query: 125 IHNT--IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ T ++ MYA CG L AR +F+ + T+ VV+W +MI G + ++E +LF +
Sbjct: 232 VPTTTALLDMYAKCGHLGLARQLFNGL-TQKTVVSWTAMIAGCIRSNRLEEGTKLFIR-- 288
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
MQE+NI P+E TM+SL+ C GA++ G+
Sbjct: 289 -----------------------------MQEENIFPNEITMLSLIVECGFTGALQLGKQ 319
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H +++ N F ++ + TA++DMY KC A +F++ + + W +M+ A
Sbjct: 320 LHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANC 379
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
++A LF +++S ++P ++ +++L+ C +G ++ K + + +++ +
Sbjct: 380 IDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGK-WVHSYIDKERVEVDCILNT 438
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+VD + G + A +L S D +W ++++ HG E A
Sbjct: 439 ALVDMYAKCGDINAAGRLFIEAISR-DICMWNAIITGFAMHGYGEEA 484
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 222 FTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
F S+L AC ++ + G+ IH F++ + + V A++ MY +C C E A VF+
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+ ++ + W++M+ L+ N + A++L + ++P ++ ++++ + +
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214
Query: 342 KDYFTLMTETYKIKPS------IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
K Y I+ S + + ++D + G L A +L + + + W +
Sbjct: 215 K-----AMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGL-TQKTVVSWTA 268
Query: 396 LLSACRKHGNIE 407
+++ C + +E
Sbjct: 269 MIAGCIRSNRLE 280
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 272/498 (54%), Gaps = 35/498 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K IH +K + D ++ L + G A F ++ ++ WN++I G++Q
Sbjct: 450 KSIHCFTVKADMDSD-LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
P NAI +F + + S I P T + A A L G +HG +VK G E D
Sbjct: 509 IGDPYNAIDMFYKLRL-SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCH 567
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM-VS 183
+ N +I MYA KCG + + LF+K +
Sbjct: 568 VKNALIDMYA--------------------------------KCGSLPSAEFLFNKTDFT 595
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
++ V+WN +I+ Y++N KEA+ F +M+ +N P+ T VS+L A A L A R+G
Sbjct: 596 KDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 655
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++ F NT+V ++IDMY KCG + ++FN + K WN+M+ G A++G+
Sbjct: 656 HACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 715
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+ AI LFS +Q S ++ D +SF++VL+AC H G V + + F M++ Y IKP ++HY+C
Sbjct: 716 DRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAGL +E I+ MP +PDA +WG+LL +CR H N+++ + A +++L+
Sbjct: 776 MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
+V++S++YA S ++ +A + R M ++ ++K PGCS +E+ +VH F G + HP+
Sbjct: 836 PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQL 895
Query: 484 PEVYLLLNDLGLLIQEMG 501
++LL N L ++++G
Sbjct: 896 ESMHLLWNTLLEKMEKIG 913
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 225/507 (44%), Gaps = 75/507 (14%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H + + GL +D + ++ S GD+ A VF ++ K ++ WN +I G SQS
Sbjct: 152 HGEIDRRGLERDVFIGAGLVDM-YSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSED 210
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE------- 120
P A+ F M + ++P ++ +LF +L +HG V ++
Sbjct: 211 PCEAVDFFRSMQLVG-VEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNGL 269
Query: 121 ----------------FDQFIHN------TIIYMYANCGFLSEARLMFDE---------- 148
FDQ + T++ YA+ G E +FD+
Sbjct: 270 IDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINK 329
Query: 149 -------------VDTE---------------FDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+D E D++ +++ AKCGE +++++LF
Sbjct: 330 VSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWG 389
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ R+ V+W+++I+ V+ +EAL LF+EMQ Q +KP+ T++S+L ACA L ++ G
Sbjct: 390 LQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG 449
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ IH F V + + TA++ MY KCG AL FN + + + WNS++ G A
Sbjct: 450 KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQI 509
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-YKIKPSIK 359
G AI +F L+ S + PD + + V+ AC ++Q L+ + ++ +K
Sbjct: 510 GDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVK 569
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
+ ++D + G L AE L D + W +++A ++G+ + A + Q + L
Sbjct: 570 --NALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQ-MRL 626
Query: 420 DKNESCGYVLMSNLYAASY--QFEEAM 444
+ +S L AA+Y F E M
Sbjct: 627 ENFHPNSVTFVSVLPAAAYLAAFREGM 653
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 185/406 (45%), Gaps = 37/406 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH ++ + D + A+ ++ + G+ A +F ++ +L W+ II Q
Sbjct: 349 KEIHGCALQQRIDSDILVATPLMVM-YAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQ 407
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P A+ LF +M ++P R+T S+ A A L L + G +H VK ++ D
Sbjct: 408 TGYPEEALSLFQEMQ-NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLS 466
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
++ MYA KCG + F++M SR
Sbjct: 467 TGTALVSMYA--------------------------------KCGFFTAALTTFNRMSSR 494
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V+WNS+I+GY + A+++F +++ I P TMV ++ ACA L + QG IH
Sbjct: 495 DIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIH 554
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN-TVPKKGLSCWNSMVFGLAMNGYE 303
+V FE + V A+IDMY KCG A +FN T K WN ++ NG+
Sbjct: 555 GLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHA 614
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EAI F ++ N P+ ++F++VL A + + + + + + ++ S
Sbjct: 615 KEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS- 673
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
++D + G L +EKL M D + W ++LS HG+ + A
Sbjct: 674 LIDMYAKCGQLXYSEKLFNEM-DHKDTVSWNAMLSGYAVHGHGDRA 718
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 210/479 (43%), Gaps = 73/479 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ L +IHA +I +G I + D+ A VF P+ +WN++IR
Sbjct: 45 LNPLLQIHAQIIVSGFKHHHSITHLINLYSLFHKCDL--ARSVFDSTPNPSRILWNSMIR 102
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+++S A+ ++ M V ++P + T+ + KA ++G HG + ++GLE
Sbjct: 103 AYTRSKQYNEALEMYYCM-VEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLE 161
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D FI ++ MY+ K G++ +R +FDK
Sbjct: 162 RDVFIGAGLVDMYS--------------------------------KMGDLKRAREVFDK 189
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M R+ V+WN+MI+G ++ EA++ FR MQ ++PS ++++L KL I
Sbjct: 190 MPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELC 249
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
IH ++ F ++ V +ID+Y KCG + A +VF+ + + W +M+ G A N
Sbjct: 250 RSIHGYVFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHN 307
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD----------------- 343
G E ++LF ++ N++ + +S ++ A + + + K+
Sbjct: 308 GCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVA 367
Query: 344 -----YFTLMTETYKIKP--------SIKHYSCMVDALGRAGLLEEAEKLIRSMPSD--- 387
+ ET K K + +S ++ AL + G EEA L + M +
Sbjct: 368 TPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMK 427
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQII--ELDKNESCGYVLMSNLYAASYQFEEAM 444
P+ + S+L AC +++ K + ++D + S G L+S +YA F A+
Sbjct: 428 PNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVS-MYAKCGFFTAAL 485
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 147/300 (49%), Gaps = 16/300 (5%)
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
D +R +FD + + + WNSMI Y R+ ++ EALE++ M E+ ++P ++T +L AC
Sbjct: 80 DLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKAC 139
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
+++G W H + E + + ++DMY K G +RA +VF+ +PK+ + WN
Sbjct: 140 TGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWN 199
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+M+ GL+ + EA+ F +Q ++P +S + + + + ++
Sbjct: 200 AMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCR---SIHGYV 256
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
++ S + ++D + G ++ A ++ M D D + WG++++ +G
Sbjct: 257 FRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAGYAHNGCF----- 310
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIE-VDGEV 470
+++EL G V ++ + A S F A E L K +I GC+L + +D ++
Sbjct: 311 --VEVLELFDKMKLGNVRINKVSAVS-AFLAAAETIDLEKGKEIH---GCALQQRIDSDI 364
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 270/498 (54%), Gaps = 36/498 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH ++ GL D + ++ GD + +F + + NL +W +++ +Q
Sbjct: 268 KQIHGLILGLGLDDDVRVGTALMEM-YFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQ 326
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P A+ F + ++ P + + +A + L L G +HG +K G + D F
Sbjct: 327 NGYPNEALEFFSEFMLDCGF-PDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVF 385
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ Y KCG+++ ++++F + +R
Sbjct: 386 VGGALVDFYG--------------------------------KCGDMEYAQQVFYGLSTR 413
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSWN++ISG+ +N EAL+ FR+MQ + IKP+ TM +L+ C L + + +H
Sbjct: 414 DLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVH 473
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+L+ + FE N +V ++I Y KCG + VF +P + WNS++ G M+G +
Sbjct: 474 CYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTD 533
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
E F ++ +N+KPD+ +F ++L++C+HSGKV+ YF M E Y ++P ++ Y+CM
Sbjct: 534 EMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCM 593
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L +A LI SMP PD IWGSLL++C+ HGN ++A+ A I ELD + S
Sbjct: 594 VDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDAS-S 652
Query: 425 CGY-VLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
GY VL++NLY S E R +K++ ++K+PGCS IEVD +H FVAG H ++
Sbjct: 653 VGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDYSHDRS 712
Query: 484 PEVYLLLNDLGLLIQEMG 501
++Y + L L ++ +G
Sbjct: 713 GDIYATIESLSLEMKRVG 730
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 185/400 (46%), Gaps = 39/400 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH HL+K G +D + +L N A +F ++++ + WNT+I GF Q
Sbjct: 59 KQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGN-AVDMFERMEERDSVSWNTMISGFCQ 117
Query: 65 SSTPRNAILLFIDMLV-TSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
S ++++F M+ R+ + + A + G ++HG +VK+G++ D+
Sbjct: 118 SGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDE 177
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ + +I MY CG + A +F+ + +++V
Sbjct: 178 FLVSALIEMYMKCGDIKNAENVFERIRD---------------------------NELVG 210
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
RN WN MI GYV N ALELF EM E I P T+V +L C++L + G+ I
Sbjct: 211 RNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQI 270
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++ + + V TA+++MY KCG PE +LQ+F L W S++ A NGY
Sbjct: 271 HGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYP 330
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH--- 360
NEA++ FS PD + +A L AC+ + + + IK
Sbjct: 331 NEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRG-----MAIHGFAIKMGFDSDVF 385
Query: 361 -YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+VD G+ G +E A+++ + S D + W +L+S
Sbjct: 386 VGGALVDFYGKCGDMEYAQQVFYGL-STRDLVSWNALISG 424
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 187/395 (47%), Gaps = 52/395 (13%)
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTS-PIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
N +I+ ++ +AI +++D + P++ R +P L KA+ L G Q+HG +
Sbjct: 7 NRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRF-FPCLIKAFGGLYDVNKGKQIHGHL 65
Query: 115 VKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
+K G D F+ N+++ MY W KCG +
Sbjct: 66 LKFGFLQDIFVKNSLLGMY------------------------W--------KCGAGGNA 93
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ--NIKPSEFTMVSLLNACA 232
+F++M R++VSWN+MISG+ ++ + ++L +FR M ++ + ++ L++CA
Sbjct: 94 VDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCA 153
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF-----NTVPKKGL 287
+ + G IH FLV + + +V+A+I+MY KCG + A VF N + + +
Sbjct: 154 SIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNM 213
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
+ WN M+ G N + A++LF + + PD + + VL C+ + K L
Sbjct: 214 AVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGL 273
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIE 407
+ + ++ + +++ + G E + ++ + + + ++WGS++ C ++G
Sbjct: 274 IL-GLGLDDDVRVGTALMEMYFKCGDPETSLQIFKR-SQNHNLVMWGSVMLNCAQNGYPN 331
Query: 408 MAKQAAKQIIELDKNESCGY----VLMSNLYAASY 438
A + + + LD CG+ +L++ L A S+
Sbjct: 332 EALEFFSEFM-LD----CGFPDPVILLAALRACSF 361
>gi|242065790|ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 159/502 (31%), Positives = 280/502 (55%), Gaps = 14/502 (2%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L+++HAH G A ++ F + YA +F P++F+++ I+ +
Sbjct: 25 LEQLHAHAFVAGRAAAQTTTFHLIRFAAFRLSCLTYARHLFDATPHPSVFLYSAILSAYV 84
Query: 64 QSSTPRNAIL-----------LFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHG 112
++ ++ LF+ ML P + YP + +A + +G+ +H
Sbjct: 85 SAAATASSYAHAHAHARDALALFLRMLRHGRPAPNQFVYPLVLRAASGVGVGIV-KSIHS 143
Query: 113 RVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID 172
K G I +++ Y+ G +++AR +FD + TE +VV+W +++ G A+ G++
Sbjct: 144 HACKSGFCGHDIIRTSVLDGYSRHGMMADARKLFDGL-TERNVVSWTALVSGYARAGKVG 202
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
++ LF++M R+ +WN++I+G +N F EA+ +F M +P+ T+ +L+AC
Sbjct: 203 DAIVLFERMPERDVAAWNAIIAGCSQNGLFVEAVGIFGRMVGAGFRPNATTVSCVLSACG 262
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
LG ++ G+ IH + C + V+ +IDMY KCG E A +F+ V + L+ WNS
Sbjct: 263 HLGMLKIGKLIHCYAWRTCVGFGSSVLNGLIDMYGKCGNLEGARWIFDEVSDRSLTTWNS 322
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
++ LA++G+ AI +F+ ++ ++PD ++F+ +L AC H G V++ YF LM +
Sbjct: 323 LINCLALHGHSKCAISVFNEMRGEGVEPDVVTFVGLLNACTHGGFVDEGIRYFELMQHEH 382
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
I+P I+HY C++D LGRAG ++A +I M + D ++WGSLL+ACR H +E A+ A
Sbjct: 383 GIEPEIEHYGCIIDLLGRAGRFQDALNVISDMRIEADEVMWGSLLNACRVHRQVEFAELA 442
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE-PGCSLIEVDGEVH 471
++++ELD N + V+++N+Y+ +EE + R +KE I K+ PGCS IEVD + H
Sbjct: 443 IRKLLELDPNNANYVVMLANVYSEGGLWEEVRKVRKFVKEENIGKKLPGCSWIEVDRKTH 502
Query: 472 EFVAGGRLHPKAPEVYLLLNDL 493
F +G HP++ +Y L DL
Sbjct: 503 RFYSGDDAHPESENIYDTLEDL 524
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 292/562 (51%), Gaps = 71/562 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K K+IH +I +G + + A + ++ + IN AY +F ++ + +L WNT+I
Sbjct: 46 LKRGKEIHGSVITSGFSWNLFAMTGVVNM-YAKCRQINDAYNMFDRMPERDLVCWNTMIS 104
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G++Q+ + A++L + M +P +T S+ A A L R G +HG V++ G E
Sbjct: 105 GYAQNGFAKVALMLVLRM-SEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFE 163
Query: 121 -------------------------FDQFIH------NTIIYMYANCGFLSEARLMF--- 146
FD H N++I Y G A L+F
Sbjct: 164 SLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKM 223
Query: 147 -----------------------------------DEVDTEFDVVAWNSMIIGLAKCGEI 171
D++ + DV NS+I +KC +
Sbjct: 224 LDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRV 283
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
D + +F + ++ VSWN+MI GY +N EAL F EMQ +NIKP FTMVS++ A
Sbjct: 284 DIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPAL 343
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A+L RQ +WIH ++ + N V+TA++DMY KCG A ++F+ + + + WN
Sbjct: 344 AELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWN 403
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+M+ G +G +++LF ++ +KP+ I+F+ L+AC+HSG V + +F M +
Sbjct: 404 AMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKD 463
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
Y I+P++ HY MVD LGRAG L +A I+ MP P ++G++L AC+ H N+++ ++
Sbjct: 464 YGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEK 523
Query: 412 AAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
AA +I +L+ ++ +VL++N+YA + + + + R +M++ ++K PGCSL+E+ EVH
Sbjct: 524 AAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVH 583
Query: 472 EFVAGGRLHPKAPEVYLLLNDL 493
F +G HP++ ++Y L L
Sbjct: 584 SFYSGTTSHPQSKKIYSYLETL 605
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 164/355 (46%), Gaps = 35/355 (9%)
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+++G+++SS+ +A+ F M S ++P + L K + G ++HG V+
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDS-VRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITS 59
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G ++ F ++ MYA KC +I+++ +
Sbjct: 60 GFSWNLFAMTGVVNMYA--------------------------------KCRQINDAYNM 87
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
FD+M R+ V WN+MISGY +N K AL L M E+ +P T+VS+L A A +
Sbjct: 88 FDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLL 147
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
R G +H +++ FE V TA++DMY KCG A +F+ + + + WNSM+ G
Sbjct: 148 RIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGY 207
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
+G A+ +F + ++P ++ + L AC G + + K + + + K+
Sbjct: 208 VQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGK-FVHKLVDQLKLDSD 266
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+ + ++ + ++ A + +++ + + W +++ ++G + A A
Sbjct: 267 VSVMNSLISMYSKCKRVDIAADIFKNL-RNKTLVSWNAMILGYAQNGCVNEALNA 320
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 274/519 (52%), Gaps = 73/519 (14%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
WNT +R ++ A+ L+ ML +P T+P K+ A L L G+Q HG++
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGD-RPNAFTFPFALKSCAALSLPILGSQFHGQI 66
Query: 115 VKQGLEFDQFI---------------------------------HNTIIYMYANCGFLSE 141
K G F+ F+ +N ++ Y + S+
Sbjct: 67 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126
Query: 142 ARLMFDEVDTE--------------------------------------FDVVAWNSMII 163
A L+F +++ E DV N I
Sbjct: 127 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFIT 186
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFT 223
KCG ++ +++LFD+M + +SWN+M+SGY +N LEL+R M + P T
Sbjct: 187 MYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVT 246
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
+V +L++CA LGA G + + + F N + A+I+MY +CG +A VF+ +P
Sbjct: 247 LVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMP 306
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
++ L W +++ G M+G+ A++LF + S ++PD +F+ VL+AC+H+G +Q +
Sbjct: 307 ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 366
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
YF +M Y+++P +HYSCMVD LGRAG L+EA+ LI SMP PD +WG+LL AC+ H
Sbjct: 367 YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIH 426
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
N+E+A+ A +++IEL+ YVL+SN+Y+ + + + R++MKE K++K+PGCS
Sbjct: 427 KNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSY 486
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDL-GLLIQEMG 501
+E+ G VH F+ G R H ++ E+Y +L +L +++QE G
Sbjct: 487 VELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFG 525
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 46/330 (13%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTS--PAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+H +K G D S + F T G +NYA +F ++ L WN ++ G++Q
Sbjct: 165 LHCSTLKYGFDSD---VSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQ 221
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ N + L+ +M + + P +T + + A LG G ++ ++ G + F
Sbjct: 222 NGLATNVLELYRNMDMNG-VHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPF 280
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI--IGLAKCGEIDESRRLFDKMV 182
++N +I MYA CG L++A+ +FD + E +V+W ++I G+ GEI
Sbjct: 281 LNNALINMYARCGNLTKAQAVFDGM-PERTLVSWTAIIGGYGMHGHGEI----------- 328
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG-E 241
A++LF+EM I+P V +L+AC+ G QG E
Sbjct: 329 ----------------------AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 366
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMN 300
+ E + ++D+ + G + A + ++P K + W +++ +
Sbjct: 367 YFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI- 425
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
++N + + + L+P+ I + +L+
Sbjct: 426 -HKNVELAELAFERVIELEPENIGYYVLLS 454
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 270/489 (55%), Gaps = 33/489 (6%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFT-QIKKPNLFIWNTIIRGFSQ 64
++HA ++K GLA D + I+ S G I A VF I+ +L WN+++ +
Sbjct: 222 QVHAKIVKHGLASDTTVCNAIIT-AYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLV 280
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ A LF++M V +P TY S+ A + G LHG V+K+GLEF
Sbjct: 281 NNQEEEAFQLFLEMQVLG-FEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVP 339
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I N++I MY S ++ M DE+ +F+ + ++
Sbjct: 340 ISNSLIAMYLK----SHSKSM--------------------------DEALNIFESLENK 369
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSWNS+++G+ ++ ++AL+ F M+ Q + + ++L +C+ L ++ G+ +H
Sbjct: 370 DHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVH 429
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ + FE N V +++I MY KCG E A + F+ PK WNS++FG A +G
Sbjct: 430 VLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGK 489
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A+ LF ++ +K D+I+F+AVLTAC+H G V + + M Y I P ++HY+CM
Sbjct: 490 IALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACM 549
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
+D LGRAG L+EA+ LI +MP +PDA++W +LL ACR G+IE+A Q A ++EL+ E
Sbjct: 550 IDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEH 609
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
C YVL+S+++ ++ E + LMKE ++K PG S IEV EV F A R HP
Sbjct: 610 CTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCE 669
Query: 485 EVYLLLNDL 493
E+YL L +L
Sbjct: 670 EIYLRLGEL 678
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 183/407 (44%), Gaps = 37/407 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++H+ ++K G + A S +L + + A+ VF I N WN +I G++Q
Sbjct: 120 QQVHSMMVKMGYEGNVFAGSALLDM-YAKCERVEDAFEVFKSINIRNSVTWNALISGYAQ 178
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
R +D + ++ T+ L L + Q+H ++VK GL D
Sbjct: 179 VG-DRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTT 237
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N II Y+ CG + +A +FD D+V WN
Sbjct: 238 VCNAIITAYSECGSIEDAERVFDGAIETRDLVTWN------------------------- 272
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
SM++ Y+ N + +EA +LF EMQ +P +T S+++A + QG+ +H
Sbjct: 273 ------SMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLH 326
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCP--ERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
++ E + ++I MY K + AL +F ++ K WNS++ G + +G
Sbjct: 327 GLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGL 386
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+A+K F ++S + D+ +F AVL +C+ + + L+ ++ +P+ S
Sbjct: 387 SEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKS-GFEPNGFVAS 445
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
++ + G++E+A K + P D +I W SL+ +HG ++A
Sbjct: 446 SLIFMYSKCGVIEDARKSFDATPKDS-SIAWNSLIFGYAQHGRGKIA 491
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 23/252 (9%)
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
N++I G AKCGEI + ++F + R+ VSWN+MI+G+V F+ ALE + M+
Sbjct: 38 NNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFA 97
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
++ S+L A +G + G+ +H+ +V +E N +A++DMY KC E A +V
Sbjct: 98 VDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEV 157
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV---------- 328
F ++ + WN+++ G A G A L ++ ++ D +F +
Sbjct: 158 FKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLH 217
Query: 329 -LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
LT H+ V L ++T I YS G +E+AE++
Sbjct: 218 KLTTQVHAKIVKHG-----LASDTTVCNAIITAYS-------ECGSIEDAERVFDGAIET 265
Query: 388 PDAIIWGSLLSA 399
D + W S+L+A
Sbjct: 266 RDLVTWNSMLAA 277
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 170/404 (42%), Gaps = 47/404 (11%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
H IK+G A+ I++ + G+I A +F + + + WNT+I GF
Sbjct: 22 HCLAIKSGTTASIYTANNIIS-GYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGN 80
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
A L F+ + ++ S+ K A +G G Q+H +VK G E + F +
Sbjct: 81 FETA-LEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGS 139
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
++ MYA C + +A +F ++ + V WN++I G A+ G+ R T
Sbjct: 140 ALLDMYAKCERVEDAFEVFKSINIR-NSVTWNALISGYAQVGD-------------RGTA 185
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
W L M+ + ++ + T LL + +H +
Sbjct: 186 FW------------------LLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKI 227
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFN-TVPKKGLSCWNSMVFGLAMNGYENEA 306
V + +T V AII Y +CG E A +VF+ + + L WNSM+ +N E EA
Sbjct: 228 VKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEA 287
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+LF +Q +PD ++ +V++A Q K L+ IK ++ + +
Sbjct: 288 FQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLV-----IKRGLEFLVPISN 342
Query: 367 AL------GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+L + ++EA + S+ + D + W S+L+ + G
Sbjct: 343 SLIAMYLKSHSKSMDEALNIFESLE-NKDHVSWNSILTGFSQSG 385
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 116/237 (48%), Gaps = 34/237 (14%)
Query: 5 KKIHAHLIKTGLA-KDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
K +H +IK GL PI+ S I + S + ++ A +F ++ + WN+I+ GFS
Sbjct: 323 KSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFS 382
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
QS +A+ F +M + + + ++ ++ + L + G Q+H V+K G E +
Sbjct: 383 QSGLSEDALKFFENMR-SQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNG 441
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ +++I+MY+ CG + +AR FD + +AWNS+I G A+ G
Sbjct: 442 FVASSLIFMYSKCGVIEDARKSFDATPKD-SSIAWNSLIFGYAQHG-------------- 486
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ K AL+LF M+++ +K T V++L AC+ +G + +G
Sbjct: 487 -----------------RGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEG 526
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 171/498 (34%), Positives = 280/498 (56%), Gaps = 36/498 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K HA ++ GL D + S IL S G +++A VF ++ +L WNT+I +Q
Sbjct: 84 KACHAQILLMGLKTD-LLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQ 142
Query: 65 SSTPRNAILLFIDMLVT-SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ A+ L + M +P T S+ A A + LH +K ++ +
Sbjct: 143 NGEENEALDLLLQMQREGTPFS--EFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNV 200
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ ++ +YA CG + + A C +F+ M
Sbjct: 201 FVATALLDVYAKCGLMKD------------------------AVC--------VFESMPD 228
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ V+W+SM +GYV+N +++AL LFR+ E +K +F M S++ ACA L A+ +G+ +
Sbjct: 229 RSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQM 288
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
+ L + F N V +++IDMY KCG E + +VF V K+ + WN+M+ GL+ +
Sbjct: 289 NALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARS 348
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
E + LF +Q L P+ ++F++VL+AC H G V + + YF LMT+ + + P++ HYSC
Sbjct: 349 LEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSC 408
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD L RAG + EA LI +P + A +WGSLL++CR HGN+E+A+ AAK++ +++ +
Sbjct: 409 MVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHN 468
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S Y+L+SN+YAA+ +++E + R L+KE ++KE G S IE+ +VH F+ G R HPK
Sbjct: 469 SGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKI 528
Query: 484 PEVYLLLNDLGLLIQEMG 501
E+Y LN++ +Q++G
Sbjct: 529 VEIYSKLNEVMDELQKLG 546
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 150/311 (48%), Gaps = 34/311 (10%)
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ K A+ L G H +++ GL+ D N +I MY+ CG + AR +FDE+ +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR- 128
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+V+WN+MI L + GE + EAL+L +MQ
Sbjct: 129 SLVSWNTMIGSLTQNGEEN-------------------------------EALDLLLQMQ 157
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+ SEFT+ S+L ACA A+ + + +H F + +LN V TA++D+Y KCG +
Sbjct: 158 REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMK 217
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A+ VF ++P + + W+SM G N +A+ LF + LK D +V+ AC
Sbjct: 218 DAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACA 277
Query: 334 HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
+ + K L++++ +I S ++D + G +EE+ K+ R + + ++W
Sbjct: 278 GLAAMIEGKQMNALLSKS-GFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEK-RNVVLW 335
Query: 394 GSLLSACRKHG 404
+++S +H
Sbjct: 336 NAMISGLSRHA 346
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 170/501 (33%), Positives = 269/501 (53%), Gaps = 37/501 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIK-KPNLFIWNTIIRGFS 63
K+IH ++ G D + + IL I+YA +F + N W+ ++ +
Sbjct: 240 KEIHGFCVRRGFVGDVVVGTGILDV-YGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYV 298
Query: 64 QSSTPRNAILLFID--MLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
R A+ LF ML I +T ++ + A L G LH +K G
Sbjct: 299 VCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVL 358
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D + NT++ MYA KCG I+ + R F++M
Sbjct: 359 DLMVGNTLLSMYA--------------------------------KCGIINGAMRFFNEM 386
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ VS+ ++ISGYV+N +E L +F EMQ I P + T+ S+L ACA L + G
Sbjct: 387 DLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGS 446
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
H + + F +T++ A+IDMY KCG + A +VF+ + K+G+ WN+M+ ++G
Sbjct: 447 CSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHG 506
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
EA+ LF +QS LKPD ++FI +++AC+HSG V + K +F MT+ + I P ++HY
Sbjct: 507 IGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHY 566
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+CMVD L RAGL +E I MP +PD +WG+LLSACR + N+E+ + +K+I +L
Sbjct: 567 ACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGP 626
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG-RLH 480
+ +VL+SN+Y+A ++++A + R KE EK PGCS IE+ G VH F+ GG R H
Sbjct: 627 ESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSH 686
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ ++ L++L + ++ +G
Sbjct: 687 PQLTQISNKLDELLVEMKRLG 707
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 195/422 (46%), Gaps = 61/422 (14%)
Query: 5 KKIHAHLIK-------TGLAKDPIAASRILAFCTSPAGDINYAYLVFTQI--KKPNLFIW 55
K IH HL+K T L + +++ + ++ A VF ++ + N+ +W
Sbjct: 29 KLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIA-CSELKIARHVFDKMPHRPKNVVLW 87
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N +IR ++ + AI L+ ML I P R T+P + KA + L A +G ++H +
Sbjct: 88 NLLIRAYAWNGPYEEAIDLYYKML-GYGITPNRFTFPFVLKACSALKEASEGREIHCDIK 146
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA-KCGEIDES 174
+ LE + ++ ++ YA CG L +A+ +FD++ DVVAWNSMI G + G DE
Sbjct: 147 RLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKR-DVVAWNSMISGFSLHEGSYDEV 205
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
RL +M + ++ P+ T+V +L A A++
Sbjct: 206 ARLLVQM--------------------------------QNDVSPNSSTIVGVLPAVAQV 233
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSM 293
++R G+ IH F V F + +V T I+D+Y KC C + A ++F+ + K W++M
Sbjct: 234 NSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAM 293
Query: 294 VFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET-- 351
V + + EA++LF Q LK D I VL+A + + + L T T
Sbjct: 294 VGAYVVCDFMREALELFC--QLLMLKDDVI----VLSAVTLATVIRVCANLTDLSTGTCL 347
Query: 352 --YKIKPS----IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
Y IK + + ++ + G++ A + M DA+ + +++S ++GN
Sbjct: 348 HCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDL-RDAVSFTAIISGYVQNGN 406
Query: 406 IE 407
E
Sbjct: 407 SE 408
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 282/503 (56%), Gaps = 34/503 (6%)
Query: 19 DPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFID 77
+P S + C + G I A +F Q+ N+ WN +I + Q+ AI LF++
Sbjct: 230 NPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFME 289
Query: 78 MLVTSPIQPQRLTYPSLFKAYAQLG----------------LARDGAQLHGRVVKQGLE- 120
M + +++ ++ Y ++G +A A + G V + ++
Sbjct: 290 M-----PEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDD 344
Query: 121 ----FDQF------IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
F+Q NT+I Y+ CG + EA +F ++ + D+V+WN+M+ A+ G+
Sbjct: 345 ARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM-VKKDIVSWNTMVASYAQVGQ 403
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
+D + ++F++M +N VSWNS+ISG +N + +AL+ F M + KP + T L++
Sbjct: 404 MDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSS 463
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA L A++ G+ +H ++ + + + V A+I MY KCG A +F + + W
Sbjct: 464 CAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSW 523
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
NS++ A+NG EA+KLF ++ + PD ++F+ +L+AC+H G ++Q F M +
Sbjct: 524 NSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQ 583
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
Y I+P +HY+CMVD LGRAG LEEA +L+R M + +A IWG+LL ACR HGN+E+AK
Sbjct: 584 AYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAK 643
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
AA++++E + +++ YVL+SN+ A + +++E R LMKE EK+PG S IE+ V
Sbjct: 644 FAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRV 703
Query: 471 HEFVAGGRLHPKAPEVYLLLNDL 493
H F++ HP+A E+ +L L
Sbjct: 704 HAFLSEDPAHPRAVELCHILRSL 726
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 201/422 (47%), Gaps = 35/422 (8%)
Query: 34 AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTY 91
+G I+ A VF + N N++I F+++ +A LF M PQR +++
Sbjct: 28 SGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGM-------PQRNIVSW 80
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
S+ AY + QL ++ + D + +I Y G L++AR +F+ +
Sbjct: 81 NSMIAAYLHNDRVEEARQLFDKMPTR----DLYSWTLMITCYTRNGELAKARNLFNLLPY 136
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+++ V N+M+ G AK + DE+RRLFD M +++ VSWNSM++GY RN + + L+ F E
Sbjct: 137 KWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEE 196
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M E+++ +++ ++G + W + N NT+ ++ + + G
Sbjct: 197 MAERDVVSWNL----MVDGFVEVGDL-NSSWEFFEKIPNP---NTVSWVTMLCGFARFGK 248
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A ++F+ +P + + WN+M+ N + +EAI LF + N IS+ V+
Sbjct: 249 IAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKN----SISWTTVING 304
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
GK+++A+ M Y+ ++ + M+ + +++A ++ + S D +
Sbjct: 305 YVRMGKLDEARQLLNQM--PYR---NVAAQTAMISGYVQNKRMDDARQIFNQI-SIRDVV 358
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELD----KNESCGYVLMSNLYAASYQFEEAMEER 447
W ++++ + G ++ A KQ+++ D Y + + AA FEE E+
Sbjct: 359 CWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKN 418
Query: 448 LL 449
++
Sbjct: 419 IV 420
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 125/259 (48%), Gaps = 19/259 (7%)
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
N I L K G+IDE+ ++F M +NTV+ NSMIS + +N + +A +LF M ++NI
Sbjct: 19 NLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNI- 77
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
+ S++ A + + + + + T T+++T Y + G +A +
Sbjct: 78 ---VSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITC----YTRNGELAKARNL 130
Query: 279 FNTVPKK-GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGK 337
FN +P K C N+MV G A N +EA +LF + + D +S+ ++LT +G+
Sbjct: 131 FNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAK----DLVSWNSMLTGYTRNGE 186
Query: 338 VNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLL 397
+ +F M E + ++ MVD G L + + +P +P+ + W ++L
Sbjct: 187 MRLGLQFFEEMAER-----DVVSWNLMVDGFVEVGDLNSSWEFFEKIP-NPNTVSWVTML 240
Query: 398 SACRKHGNIEMAKQAAKQI 416
+ G I A++ Q+
Sbjct: 241 CGFARFGKIAEARRLFDQM 259
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H ++K+G A D + S L + G I+ A L+F I ++ WN++I ++
Sbjct: 474 KQLHQLVMKSGYATD-LFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYAL 532
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQL 110
+ R A+ LF M V + P +T+ + A + +GL G +L
Sbjct: 533 NGNGREALKLFHKMEVEG-VAPDEVTFVGILSACSHVGLIDQGLKL 577
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 281/494 (56%), Gaps = 39/494 (7%)
Query: 8 HAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
HA I++GL + A+ IL A+C GDI A +VF + N WN +I G++Q+
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYC--KCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
R A+ LF + +V + ++ + +A +LG +G ++H +V+ GL+ + +
Sbjct: 242 DSREALALF-NRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N +I MY+ KC +D + +FD++ R
Sbjct: 301 NALITMYS--------------------------------KCKRVDLASHVFDELDRRTQ 328
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSWN+MI G +N ++A+ LF MQ +N+KP FT+VS++ A A + Q WIH +
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ + + V+TA+IDMY KCG A +FN+ ++ + WN+M+ G +G+ A
Sbjct: 389 SIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAA 448
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
++LF ++S + P+ +F++VL+AC+H+G V++ ++YFT M E Y ++P ++HY MVD
Sbjct: 449 VELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVD 508
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGRAG L+EA I+ MP DP ++G++L AC+ H N+E+A+++A++I EL E
Sbjct: 509 LLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVY 568
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
+VL++N+YA + +++ R M++ ++K PG S+I++ E+H F +G H +A E+
Sbjct: 569 HVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEI 628
Query: 487 YLLLNDLGLLIQEM 500
Y + L LI+E+
Sbjct: 629 Y---SRLAKLIEEI 639
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 198/448 (44%), Gaps = 82/448 (18%)
Query: 5 KKIHAHLIKTGLAKDPIAAS---RILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+ +HA L G+ + +AA+ + A C PA A VF ++ + WN ++ G
Sbjct: 79 RAVHAQLAARGIDSEALAATALANMYAKCRRPAD----ARRVFDRMPVRDRVAWNALVAG 134
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++++ R A+ + + M +P +T S+ A A + H ++ GLE
Sbjct: 135 YARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLE- 193
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ ++ + A C KCG+I +R +FD M
Sbjct: 194 -ELVNVATAILDAYC------------------------------KCGDIRAARVVFDWM 222
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++N+VSWN+MI GY +N +EAL LF M E+ + ++ ++++ L AC +LG + +G
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H LV + N V+ A+I MY KC + A VF+ + ++ WN+M+ G A NG
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTAC----------------------------- 332
+A++LF+ +Q N+KPD + ++V+ A
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402
Query: 333 ------NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
G+VN A+ F E + I ++ M+ G G + A +L M S
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVIT-----WNAMIHGYGSHGFGKAAVELFEEMKS 457
Query: 387 ---DPDAIIWGSLLSACRKHGNIEMAKQ 411
P+ + S+LSAC G ++ ++
Sbjct: 458 IGIVPNETTFLSVLSACSHAGLVDEGRE 485
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 130/291 (44%), Gaps = 34/291 (11%)
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
+R + S A+ F+ M ++ P T+ SL K A G G +H ++ +G
Sbjct: 31 LRASAARSDLPAALAAFVAM-SSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARG 89
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
++ + + MYA C ++AR +FD + D VAWN
Sbjct: 90 IDSEALAATALANMYAKCRRPADARRVFDRMPVR-DRVAWN------------------- 129
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAI 237
++++GY RN + A+E+ MQ E+ +P T+VS+L ACA A+
Sbjct: 130 ------------ALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARAL 177
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
H F + + E V TAI+D YCKCG A VF+ +P K WN+M+ G
Sbjct: 178 AACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGY 237
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
A NG EA+ LF+ + + +S +A L AC G +++ L+
Sbjct: 238 AQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELL 288
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 3/215 (1%)
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
AL F M P T SLL CA G + G +H L + + TA+ +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYI 323
MY KC P A +VF+ +P + WN++V G A NG A+++ +Q +PD I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+ ++VL AC ++ + ++ + ++ + + ++DA + G + A +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRS-GLEELVNVATAILDAYCKCGDIRAARVVFDW 221
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
MP+ +++ W +++ ++G+ A +++E
Sbjct: 222 MPT-KNSVSWNAMIDGYAQNGDSREALALFNRMVE 255
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 169/473 (35%), Positives = 277/473 (58%), Gaps = 27/473 (5%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYP 92
G ++ A +F ++++ N+ W ++I+G+ ++ A +LF M P++ ++
Sbjct: 182 GRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERM-------PEKDLASWK 234
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIY--MYANC---GFLSEARLMFD 147
+ AY +G V + L IH+ + M + C G + A+ FD
Sbjct: 235 VMVSAYMSVG---------NLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFD 285
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
+ E +V +W +I G K G++D +R +FD+M +N V+W++MI GY + +L+
Sbjct: 286 RMQ-ERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLK 344
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYC 267
L++ +EQ IKP E + +++AC++LG E + V N VVT++IDMY
Sbjct: 345 LYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYA 404
Query: 268 KCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIA 327
KCG ERA+QVF V +K L C+++++ A +G +AI LFS +Q +N+KPD ++F+
Sbjct: 405 KCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLG 464
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
VLTACNH G V + + F M + Y I+PS KHY+CMVD LGRAG LEEA LI SMP
Sbjct: 465 VLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVA 524
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEER 447
P+A +WG+LLSACR H N+++A+ AA ++ +++ N S YVL+ N+YA + Q+++ + R
Sbjct: 525 PNATVWGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVR 584
Query: 448 LLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEM 500
+++E ++ K G S IE+ +HEFV G + H + ++ +L LL ++M
Sbjct: 585 AMIRENRVRKNRGSSWIELGSVIHEFVMGDKSHFDSERIFFMLE---LLCKDM 634
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 229/478 (47%), Gaps = 66/478 (13%)
Query: 1 MKDLKKIHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K L IHAHL+ +G +A + +++L S G ++YA+ +F + +PN F+W +I
Sbjct: 16 LKTLTTIHAHLLISGSIASSDLTLNKLLRL-YSKFGAVSYAHKLFDETPEPNSFLWTALI 74
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
GF++++ NA FI M I P T S+ KA ++LG +DG ++G V+ G
Sbjct: 75 HGFTENNQYENAFAFFIKMH-RENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGY 133
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
EFD + N +I ++ CG + AR MFDE++ E D V+WNSMI G G +D +R+LFD
Sbjct: 134 EFDLVVKNVMIELFMRCGEMGSARQMFDEME-ERDAVSWNSMITGYGNNGRVDIARKLFD 192
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M RN +SW SMI GYV+ EA LF M E+++ S MVS + L A R
Sbjct: 193 RMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDL-ASWKVMVSAYMSVGNLVAARN 251
Query: 240 ----------GEWIHNFLVTNCF----------------ELNTIVVTAIIDMYCKCGCPE 273
G W N +++ C E N IID Y K G +
Sbjct: 252 LFELMPIHDVGTW--NLMISGCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVD 309
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
A VF+ +P+K L W++M+ G A G+ ++KL+ + +KPD + +++AC+
Sbjct: 310 AARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACS 369
Query: 334 HSGKVNQAKDYF---------------TLMTETYKIKPSIKH---------------YSC 363
G + A+ T + + Y +I+ YS
Sbjct: 370 QLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYST 429
Query: 364 MVDALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
++ A GL E+A L M PD + + +L+AC G + ++ +Q+I+
Sbjct: 430 VITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMID 487
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 147/295 (49%), Gaps = 14/295 (4%)
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
N ++ +K G + + +LFD+ N+ W ++I G+ N +++ A F +M +NI
Sbjct: 40 NKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIV 99
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
P FT+ S+L A ++LG I+ G+ ++ V +E + +V +I+++ +CG A Q+
Sbjct: 100 PLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQM 159
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
F+ + ++ WNSM+ G NG + A KLF ++ N+ IS+ +++ +G +
Sbjct: 160 FDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNV----ISWTSMIQGYVKAGDL 215
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
+A+ F M E + + MV A G L A L MP D W ++S
Sbjct: 216 LEARVLFERMPE-----KDLASWKVMVSAYMSVGNLVAARNLFELMPIH-DVGTWNLMIS 269
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNESC----GYVLMSNLYAASYQFEEAMEERLL 449
C K G ++ AK+ ++ E + GY+ + ++ AA F++ E+ L+
Sbjct: 270 GCCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLV 324
>gi|357141789|ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Brachypodium distachyon]
Length = 555
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/463 (37%), Positives = 273/463 (58%), Gaps = 17/463 (3%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKK-PNLFIWNTIIRGFSQ 64
++HA ++ GL D + +LA + D VF +L WNT++ G+ +
Sbjct: 100 QVHAQAVRRGLLVDVFVVNTLLAM-YAAFRDTRSMREVFDSCAGVADLVTWNTMLGGYVK 158
Query: 65 SSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
A +F M PQR +++ ++ AYA G ++ + G
Sbjct: 159 CGEIGEARRVFEQM-------PQRNGVSWSAMVGAYAGAGELDVAREMFDEMPAIGRNVV 211
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ N++I +A G L AR MFDE+ ++V+WN+M+ G A GE++++R LFD+M
Sbjct: 212 SW--NSMITGFARHGLLPLARKMFDEMPVR-NLVSWNTMVRGYAVNGEMNDARELFDRMP 268
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ VSW MISGY + + E LELFR MQ E N+ P+E TMVS+L+ACA L A+ +G
Sbjct: 269 EKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLSACAHLTALEEGR 328
Query: 242 WIHNFLVTNCFELNT--IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
W H F+ + L++ + A+IDMY KCG + A+++F+++ +K +S WN+++ GLA+
Sbjct: 329 WAHAFIDKHKMVLDSEFNLGAALIDMYSKCGRTDLAVKIFHSLDQKNVSAWNALITGLAV 388
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG +I +F ++ S KP+ I+F+ VLTAC H G V++ + F M T ++P K
Sbjct: 389 NGDVRSSIDVFEQMRRSGEKPNGITFVGVLTACAHGGLVDEGRRCFQSMASTCGVQPEAK 448
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAGLLEEAE+LIRSMP PD +I G+LL ACR H +++A + +I+ L
Sbjct: 449 HYGCMVDMLGRAGLLEEAEELIRSMPMVPDVMILGALLGACRMHKRVDVAARVQNEILGL 508
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS 462
+S +VL+S++YAA+ ++ +A+ R ++++ I K G S
Sbjct: 509 STQQSGCHVLISDIYAAAGKWADALYARGVLQKFGISKLRGSS 551
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 189/381 (49%), Gaps = 13/381 (3%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A L F F+ N +IR + S +PR A F +L S P R T+PSL K+ +
Sbjct: 31 ASLYFPLFPSSCTFLHNLLIRASATSPSPRLAFAAFSSIL-RSGDTPDRFTFPSLLKSAS 89
Query: 100 QLG-LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAW 158
+L R GAQ+H + V++GL D F+ NT++ MYA R +FD D+V W
Sbjct: 90 RLASFPRTGAQVHAQAVRRGLLVDVFVVNTLLAMYAAFRDTRSMREVFDSCAGVADLVTW 149
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
N+M+ G KCGEI E+RR+F++M RN VSW++M+ Y + A E+F EM I
Sbjct: 150 NTMLGGYVKCGEIGEARRVFEQMPQRNGVSWSAMVGAYAGAGELDVAREMFDEMPA--IG 207
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFL-VTNCFELNTIVVTAIIDMYCKCGCPERALQ 277
+ + S++ A+ G + + + + V N NT+V Y G A +
Sbjct: 208 RNVVSWNSMITGFARHGLLPLARKMFDEMPVRNLVSWNTMVRG-----YAVNGEMNDARE 262
Query: 278 VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSG 336
+F+ +P+K + W M+ G A E ++LF +QS SN+ P+ ++ ++VL+AC H
Sbjct: 263 LFDRMPEKDVVSWTCMISGYAQARCYTETLELFRAMQSESNVLPNEVTMVSVLSACAHLT 322
Query: 337 KVNQAKDYFTLMTETYKIKPS-IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
+ + + + + + S + ++D + G + A K+ S+ + W +
Sbjct: 323 ALEEGRWAHAFIDKHKMVLDSEFNLGAALIDMYSKCGRTDLAVKIFHSL-DQKNVSAWNA 381
Query: 396 LLSACRKHGNIEMAKQAAKQI 416
L++ +G++ + +Q+
Sbjct: 382 LITGLAVNGDVRSSIDVFEQM 402
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 164/499 (32%), Positives = 293/499 (58%), Gaps = 9/499 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDIN-YAYLVFTQIKKPNLFIWNTII 59
+ +K+IH H+++ GL + ++++ T ++ Y V ++ N F+W +I
Sbjct: 63 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWTAVI 122
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QG 118
RG++ AI ++ + I P T+ +L KA +G G Q H + + +G
Sbjct: 123 RGYTIEGKFDEAIAMY-GCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRG 181
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
F ++ NT+I MY CG + AR +FDE+ E DV++W +I A+ G ++ + LF
Sbjct: 182 FCF-VYVGNTMIDMYVKCGSIVCARKVFDEM-PERDVISWTELIAAYARVGNMESAADLF 239
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+ + +++ V+W +M++G+ +N K +EALE F M++ I+ E T+ ++ACA+LGA +
Sbjct: 240 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 299
Query: 239 QGEWIHNFLVTNCFELNTIVV--TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ + + + VV +A+IDMY KCG E A+ VF ++ K + ++SM+ G
Sbjct: 300 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILG 359
Query: 297 LAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
LA +G EA+ LF + + + +KP+ ++F+ LTAC+HSG V+Q + F M +T+ ++
Sbjct: 360 LATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVE 419
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P+ HY+CMVD LGRAG L+EA +LI++M +P +WG+LL ACR H N ++A+ AA+
Sbjct: 420 PTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEH 479
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS-LIEVDGEVHEFV 474
+ EL+ + Y+L+SN+Y+++ + + R L+KE ++K P S +++ +G++H+F
Sbjct: 480 LFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKFF 539
Query: 475 AGGRLHPKAPEVYLLLNDL 493
G HP + ++ L +L
Sbjct: 540 PGNLNHPMSKKIQDKLEEL 558
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 280/506 (55%), Gaps = 42/506 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+ H + G D +S ++ S G ++ A ++F +I + N+ W ++I G+ Q
Sbjct: 102 KQAHQQALVFGFESDLFVSSALIDM-YSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQ 160
Query: 65 SSTPRNAILLFIDMLVTSP--------IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+ A+++F + L + S+ A +++ +HG +K
Sbjct: 161 NDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIK 220
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
GL+ + NT++ YA KCGE+ SR+
Sbjct: 221 VGLDKVMGVENTLLDAYA--------------------------------KCGEVSLSRK 248
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLG 235
+FD M ++ VSWNSMI+ Y +N +A E+F M + K +E T+ +LL ACA G
Sbjct: 249 VFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEG 308
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A+R G +H+ ++ + N I+ T+IIDMYCKCG E A F+ + +K + W +M+
Sbjct: 309 ALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIA 368
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
G M+G+ EA+ +F + + +KP+YI+FI+VL AC+H+G + + +F M+ Y ++
Sbjct: 369 GYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVE 428
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P ++HY CMVD LGRAG ++EA LI+SM D ++WGSLL+ACR H ++E+A+ +A++
Sbjct: 429 PGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARE 488
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+ +LD + YVL++N+YA + ++++ R+L+K+ + K PG SL+E+ G VH F+
Sbjct: 489 LFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLV 548
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQEMG 501
G + HP+ ++Y L +L + +QE G
Sbjct: 549 GDKEHPQHEKIYKYLEELSVKLQEAG 574
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 175/425 (41%), Gaps = 86/425 (20%)
Query: 31 TSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLT 90
T+ A + N L + +++ WN++I ++ ++ F + I+P R T
Sbjct: 26 TAAATNTNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAF-SWMRKLDIKPNRST 84
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
+P K+ + L G Q H + + G E D F+ + +I MY+ CG LS AR++FDE+
Sbjct: 85 FPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIP 144
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
++V W S+I+GYV+N EAL +F+
Sbjct: 145 RR-NIVTW-------------------------------TSLITGYVQNDDAHEALMVFK 172
Query: 211 EM---------QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTA 261
E +E M+S+L+AC+++ E +H + + V
Sbjct: 173 EFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENT 232
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG-LQSSNLKP 320
++D Y KCG + +VF+ + +K + WNSM+ A NG +A ++F G L++ K
Sbjct: 233 LLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKY 292
Query: 321 DYISFIAVLTACNHS-----------------------------------GKVNQAKDYF 345
+ ++ +L AC H G+ A++ F
Sbjct: 293 NEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAF 352
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM---PSDPDAIIWGSLLSACRK 402
M E +++ ++ M+ G G EA + M P+ I + S+L+AC
Sbjct: 353 DGMKE-----KNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSH 407
Query: 403 HGNIE 407
G +E
Sbjct: 408 AGFLE 412
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 165/475 (34%), Positives = 265/475 (55%), Gaps = 37/475 (7%)
Query: 8 HAHLIKTGLAKDP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
H+ L K L DP A S I A+ + G + A VF +I + WN++I G++++
Sbjct: 145 HSLLFKLALHSDPHTAHSLITAY--ARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAG 202
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
R A+ +F +M +P ++ SL A +LG G + G VV++G+ + +I
Sbjct: 203 CAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIG 262
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+ +I MYA KCGE++ +RR+FD M +R+
Sbjct: 263 SALISMYA--------------------------------KCGELESARRIFDGMAARDV 290
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
++WN++ISGY +N EA+ LF M+E + ++ T+ ++L+ACA +GA+ G+ I +
Sbjct: 291 ITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEY 350
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
F+ + V TA+IDMY K G + A +VF +P+K + WN+M+ LA +G EA
Sbjct: 351 ASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEA 410
Query: 307 IKLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+ LF + + +P+ I+F+ +L+AC H+G V++ F +M+ + + P I+HYSCM
Sbjct: 411 LSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCM 470
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD L RAG L EA LIR MP PD + G+LL ACR N+++ ++ + I+E+D + S
Sbjct: 471 VDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPSNS 530
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
Y++ S +YA +E++ RLLM++ I K PGCS IEV+ +HEF AG L
Sbjct: 531 GNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGL 585
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 184/377 (48%), Gaps = 44/377 (11%)
Query: 39 YAYLVFTQIK-KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKA 97
Y+ L+F+ I PN + +N +IR + + L +++ + P T+P F +
Sbjct: 72 YSSLLFSHIAPHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLS 131
Query: 98 YAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVA 157
A L H + K L D +++I YA CG ++ AR +FDE+ D V+
Sbjct: 132 CANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHR-DSVS 190
Query: 158 WNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN- 216
WNSMI G AK G +EA+E+FREM ++
Sbjct: 191 WNSMIAGYAKAGCA-------------------------------REAVEVFREMGRRDG 219
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+P E ++VSLL AC +LG + G W+ F+V LN+ + +A+I MY KCG E A
Sbjct: 220 FEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESAR 279
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
++F+ + + + WN+++ G A NG +EAI LF G++ + + I+ AVL+AC G
Sbjct: 280 RIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIG 339
Query: 337 KVNQAKDYFTLMTETYKIKPSIKH----YSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
++ K + Y + +H + ++D ++G L+ A+++ + MP +A
Sbjct: 340 ALDLGKQ-----IDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEA-S 393
Query: 393 WGSLLSACRKHGNIEMA 409
W +++SA HG + A
Sbjct: 394 WNAMISALAAHGKAKEA 410
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 177/505 (35%), Positives = 273/505 (54%), Gaps = 38/505 (7%)
Query: 1 MKDLKKIHAHLIKTGLAK-DPIAASRILAFCTS-PAGDINYAYLVFTQI-KKPNLFIWNT 57
+ +K++HA ++ G+ P+ A +L S A + YA V T++ P+ F NT
Sbjct: 32 LATVKQLHARALRAGVPPAHPLLAKHLLFHLASLRAPPLRYAVAVLTRVLPDPDPFSLNT 91
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
++R + SS P A+ L L P TYP L +A A+L R G ++H K
Sbjct: 92 VLRIAASSSRPSLALALHARRLA----PPDTHTYPPLLQACARLLSLRHGERIHAEAAKN 147
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GL F+ N+++++Y CG +F+ FD + GE
Sbjct: 148 GLATLVFVKNSLVHLYGACG-------LFESAHRVFDEI----------PVGE------- 183
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
RN VSWNSM++G+ N + E L +FREM + N P FT+VS+L A A++GA+
Sbjct: 184 ------RNLVSWNSMLNGFAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEIGAL 237
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV-PKKGLSCWNSMVFG 296
G +H +L N+ V A+ID+Y KCG E A +VF + ++ + W S++ G
Sbjct: 238 ALGRRVHVYLTKVGLVENSHVGNALIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLIVG 297
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA+NG+ EA++LF ++ L P I+ + VL AC+H G V+ YF M E Y I P
Sbjct: 298 LAVNGFGKEALELFGIMEREKLVPTEITMVGVLYACSHCGLVDDGFMYFNRMKEEYNIAP 357
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
I+H CMVD LGRAG ++EA I +MP +P+A++W +LL AC H +E+ + A ++
Sbjct: 358 RIEHLGCMVDLLGRAGKVKEAYDYILTMPLEPNAVVWRTLLGACAMHKKLELGEAAWARL 417
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+ELD S YVL+SNLYAA ++ + R M + + K PG SL+E+ V+EFV G
Sbjct: 418 VELDPGHSGDYVLLSNLYAAVGRWADVHVLRKTMVKDGVRKNPGRSLVELRNSVYEFVMG 477
Query: 477 GRLHPKAPEVYLLLNDLGLLIQEMG 501
R HP++ ++Y +L ++ ++ G
Sbjct: 478 DRSHPESEQIYQMLAEVADSLRREG 502
>gi|225435652|ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
[Vitis vinifera]
Length = 461
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 277/472 (58%), Gaps = 39/472 (8%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQ--IKKPNLFIWNTIIRG 61
L ++H+ ++KT +P S+ + +S + I +A LVF + I+ P +F WN+IIR
Sbjct: 18 LLQLHSLILKTAKDHNPDLISQFIFSISSVS--IEFARLVFDRLPIRAP-IFAWNSIIRA 74
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+++SS P A+ LF M ++P TYP + KA + + G +H +VK G +
Sbjct: 75 YTKSSVPIEAVKLFSQMQRVG-LKPDNFTYPFVVKACGRSLVVGAGGAMHSIIVKAGFDS 133
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D+++ NT++ MYAN +GLA RR+F++M
Sbjct: 134 DRYVGNTLLRMYANLN------------------------AVGLA--------RRVFNEM 161
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ VSW+SMI+GYV +AL +FR M N KP+ T+VSLL+AC +L I GE
Sbjct: 162 TVRDVVSWSSMIAGYVACNCQADALMVFRHMMLANEKPNSVTLVSLLSACTRLLNIGVGE 221
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH++++ NC L+ + TAI++MY KCG E+AL+VFN++ +K L W M+ GLA +
Sbjct: 222 SIHSYIIVNCIGLDVALGTAILEMYSKCGHIEKALKVFNSLTEKNLQSWTIMISGLADHS 281
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ +AI LF+ ++ + L+PD +SF +L+AC+H G V++ + +F+ M + Y I+P+++HY
Sbjct: 282 HGEDAISLFTQMEQTGLQPDSMSFSEILSACSHLGLVDEGQTFFSQMVKIYNIRPTMEHY 341
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI-EMAKQAAKQIIELD 420
CMVD RAG++EEA ++I++MP +P+++I S + ACR G + + + ++E++
Sbjct: 342 GCMVDMFARAGMIEEAYEIIKNMPMEPNSVILRSFIGACRNDGRVFGFDENLRRLLLEIE 401
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
+ YVL S + + S + EA + R+ MKE ++K PG S +EV G E
Sbjct: 402 PDLGANYVLASGVSSLSGCWNEAADLRVSMKEKGLKKVPGWSRVEVSGSHTE 453
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 269/465 (57%), Gaps = 11/465 (2%)
Query: 7 IHAHLIKTGLAKDPIAASRIL----AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+HA ++K G D ++ ++ FC ++ +A VF ++ + +L WN++I G+
Sbjct: 817 VHARVLKLGFDSDLFVSNALIHGYAGFC-----ELGFARKVFDEMSERDLVSWNSLICGY 871
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ +++F +M + + ++ +T + A LG + + + +E D
Sbjct: 872 GRCRRYSEVLVVFEEMRM-ADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVD 930
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
++ NT+I MY + AR +FD + + ++V+WN+MI+G K G + +R+LFD M
Sbjct: 931 VYLGNTLIDMYGRRSMVDLARRVFDRM-RDRNMVSWNAMIMGYGKAGNLVAARKLFDDMP 989
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ +SW SMIS Y + +F +A+ LF+EM +KP E T+ S+L+ACA +GA+ GE
Sbjct: 990 HRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEA 1049
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H ++ + V A+IDMYCKCG E+ L VF + K+ W S++ GLA+NG
Sbjct: 1050 VHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGS 1109
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+ A+ LFS + ++P + +F+ VL AC H+G V++ +YF M Y + P +KHY
Sbjct: 1110 ADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYG 1169
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C+VD L R+G L A + I+ MP DPD ++W LLSA + HGN+ +A+ A K+++E D +
Sbjct: 1170 CVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETDPS 1229
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
S Y+L SN YA S ++E+ ++ R LM+E + K S +E++
Sbjct: 1230 NSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEIN 1274
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 203/433 (46%), Gaps = 69/433 (15%)
Query: 9 AHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
+++IK L DPI+ +L ++ SP +I A +F QI +P L WN +IRG+SQ++
Sbjct: 718 SNMIKELLPTDPISIFNLLKSYALSPT-NILKANELFRQIPRPTLSHWNIMIRGWSQTNQ 776
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
P AI + +++ + + LTYP L KA A++ +H RV+K G + D F+ N
Sbjct: 777 PIEAIRNY-NLMYSQALFGNNLTYPFLLKACARISNV-SCTTVHARVLKLGFDSDLFVSN 834
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTV 187
+I+ YA L AR +FDE+ +E D+V+WNS+I G +C RR
Sbjct: 835 ALIHGYAGFCELGFARKVFDEM-SERDLVSWNSLICGYGRC------RR----------- 876
Query: 188 SWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL 247
+ E L +F EM+ ++K TMV ++ AC LG + + ++
Sbjct: 877 --------------YSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYI 922
Query: 248 VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG----------- 296
N E++ + +IDMY + + A +VF+ + + + WN+M+ G
Sbjct: 923 EENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAAR 982
Query: 297 --------------------LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
+ G +A++LF + + +KPD I+ +VL+AC H G
Sbjct: 983 KLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIG 1042
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
++ + + + Y + I + ++D + G +E+ + M D++ W S+
Sbjct: 1043 ALDVGEAVHEYIRK-YDVNADIYVGNALIDMYCKCGAVEKGLSVFEEM-GKRDSVSWTSV 1100
Query: 397 LSACRKHGNIEMA 409
++ +G+ + A
Sbjct: 1101 IAGLAVNGSADSA 1113
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 148/310 (47%), Gaps = 24/310 (7%)
Query: 180 KMVSRNTVS-WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+ + R T+S WN MI G+ + + EA+ + M Q + + T LL ACA++ +
Sbjct: 754 RQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACARISNV- 812
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMY---CKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+H ++ F+ + V A+I Y C+ G A +VF+ + ++ L WNS++
Sbjct: 813 SCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGF---ARKVFDEMSERDLVSWNSLIC 869
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
G +E + +F ++ +++K D ++ + V+ AC G+ D E K++
Sbjct: 870 GYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVV-DAMIEYIEENKVE 928
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
+ + ++D GR +++ A ++ M D + + W +++ K GN+ A+ K
Sbjct: 929 VDVYLGNTLIDMYGRRSMVDLARRVFDRM-RDRNMVSWNAMIMGYGKAGNLVAAR---KL 984
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAME--ERLLMKEVKIEKEPGCSL---------I 464
++ + + M + Y+ + QF +A+ + +++ +VK ++ S+ +
Sbjct: 985 FDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGAL 1044
Query: 465 EVDGEVHEFV 474
+V VHE++
Sbjct: 1045 DVGEAVHEYI 1054
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 164/494 (33%), Positives = 281/494 (56%), Gaps = 39/494 (7%)
Query: 8 HAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
HA I++GL + A+ IL A+C GDI A +VF + N WN +I G++Q+
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYC--KCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
R A+ LF + +V + ++ + +A +LG +G ++H +V+ GL+ + +
Sbjct: 242 DSREALALF-NRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N +I MY+ KC +D + +FD++ R
Sbjct: 301 NALITMYS--------------------------------KCKRVDLASHVFDELDRRTQ 328
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSWN+MI G +N ++A+ LF MQ +N+KP FT+VS++ A A + Q WIH +
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ + + V+TA+IDMY KCG A +FN+ ++ + WN+M+ G +G+ A
Sbjct: 389 SIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAA 448
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
++LF ++S + P+ +F++VL+AC+H+G V++ ++YFT M E Y ++P ++HY MVD
Sbjct: 449 VELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVD 508
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGRAG L+EA I+ MP DP ++G++L AC+ H N+E+A+++A++I EL E
Sbjct: 509 LLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVY 568
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
+VL++N+YA + +++ R M++ ++K PG S+I++ E+H F +G H +A E+
Sbjct: 569 HVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEI 628
Query: 487 YLLLNDLGLLIQEM 500
Y + L LI+E+
Sbjct: 629 Y---SRLAKLIEEI 639
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 198/448 (44%), Gaps = 82/448 (18%)
Query: 5 KKIHAHLIKTGLAKDPIAAS---RILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+ +HA L G+ + +AA+ + A C PA A VF ++ + WN ++ G
Sbjct: 79 RAVHAQLAARGIDSEALAATALANMYAKCRRPAD----ARRVFDRMPVRDRVAWNALVAG 134
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++++ R A+ + + M +P +T S+ A A + H ++ GLE
Sbjct: 135 YARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLE- 193
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ ++ + A C KCG+I +R +FD M
Sbjct: 194 -ELVNVATAILDAYC------------------------------KCGDIRAARVVFDWM 222
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++N+VSWN+MI GY +N +EAL LF M E+ + ++ ++++ L AC +LG + +G
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H LV + N V+ A+I MY KC + A VF+ + ++ WN+M+ G A NG
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTAC----------------------------- 332
+A++LF+ +Q N+KPD + ++V+ A
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402
Query: 333 ------NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
G+VN A+ F E + I ++ M+ G G + A +L M S
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVIT-----WNAMIHGYGSHGFGKAAVELFEEMKS 457
Query: 387 ---DPDAIIWGSLLSACRKHGNIEMAKQ 411
P+ + S+LSAC G ++ ++
Sbjct: 458 IGIVPNETTFLSVLSACSHAGLVDEGRE 485
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 126/279 (45%), Gaps = 34/279 (12%)
Query: 71 AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTII 130
A+ F+ M ++ P T+ SL K A G G +H ++ +G++ + +
Sbjct: 43 ALAAFVAM-SSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101
Query: 131 YMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWN 190
MYA C ++AR +FD + D VAWN
Sbjct: 102 NMYAKCRRPADARRVFDRMPVR-DRVAWN------------------------------- 129
Query: 191 SMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVT 249
++++GY RN + A+E+ MQ E+ +P T+VS+L ACA A+ H F +
Sbjct: 130 ALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIR 189
Query: 250 NCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKL 309
+ E V TAI+D YCKCG A VF+ +P K WN+M+ G A NG EA+ L
Sbjct: 190 SGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALAL 249
Query: 310 FSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
F+ + + +S +A L AC G +++ L+
Sbjct: 250 FNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELL 288
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 3/215 (1%)
Query: 205 ALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
AL F M P T SLL CA G + G +H L + + TA+ +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYI 323
MY KC P A +VF+ +P + WN++V G A NG A+++ +Q +PD I
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+ ++VL AC ++ + ++ + ++ + + ++DA + G + A +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRS-GLEELVNVATAILDAYCKCGDIRAARVVFDW 221
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
MP+ +++ W +++ ++G+ A +++E
Sbjct: 222 MPT-KNSVSWNAMIDGYAQNGDSREALALFNRMVE 255
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 271/519 (52%), Gaps = 72/519 (13%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRV 114
WN +R ++ + A+ L+ ML + P T+P FK+ A L L G+QLHG V
Sbjct: 24 WNARLRELARQRHFQEALNLYCQMLASGD-SPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 115 VKQGLEFDQFI---------------------------------HNTIIYMYANCGFLSE 141
+K G E + F+ +N +I Y+ S+
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 142 ARLMFDEVDTEF--------------------------------------DVVAWNSMII 163
A L+F ++ E D+ N ++
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFT 223
+CG +D +R+LFD M + ++WN+MISGY +N L+L+R+M+ I P T
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVT 262
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
+V +L++CA LGA G + + + F N + A+I+MY +CG +A +F+ +
Sbjct: 263 LVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMT 322
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
+K + W +++ G M+G A++LF + SS+ PD +F++VL+AC+H+G +
Sbjct: 323 EKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLY 382
Query: 344 YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKH 403
YFT M Y ++P +HYSC+VD LGRAG LEEA KLI SM +PD +WG+LL AC+ H
Sbjct: 383 YFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIH 442
Query: 404 GNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
N+E+A+ A +++IE + YVL+SN+++ + E + R++M+E K++KEPGCS
Sbjct: 443 RNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSY 502
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMGS 502
+E G +H F+AG R HP+A E+Y +L+ L +I+ G
Sbjct: 503 VEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGG 541
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 6/223 (2%)
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
T SWN+ + R F+EAL L+ +M P+ FT +CA L G +H
Sbjct: 20 TTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLH 79
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF--NTVPKKGLSCWNSMVFGLAMNGY 302
++ E V T++I MYCKC A +VF N + C+N+++ G ++N
Sbjct: 80 GHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSR 139
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA-KDYFTLMTETYKIKPSIKHY 361
++A+ LF ++ + + ++ + ++ C +G ++ + + + +
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVC--AGPIHLGFGTSLHACSVRFGLDGDLSVG 197
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+C++ R G ++ A KL MP + I W +++S ++G
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMP-EKGLITWNAMISGYAQNG 239
>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
Length = 601
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/498 (34%), Positives = 288/498 (57%), Gaps = 13/498 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+ H H + G+ D + ++ F + G+++ A + F ++ + N +I G+S+S
Sbjct: 99 QTHCHALVRGMLGDVFVQTALVDF-YAKNGNMDSAVMAFEEMPIKDPIPMNCLIIGYSRS 157
Query: 66 STPRNAILLFIDMLVTSPIQPQRLT--YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
A LF M P++ + + S+ YA G ++ L +++++G +
Sbjct: 158 GDVEEARRLFDSM-------PRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNA 210
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTE--FDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
T+ + A G L R V E +V+ +++ KC IDE+RR FD+M
Sbjct: 211 ITITTVFSICAKTGDLETGRRAKAWVSEEDLQNVIVHTALMEMYVKCRAIDEARREFDRM 270
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ V+W++MI+GY N + E+LELF M+ N KP+E T+V +L+ACA+LG+ GE
Sbjct: 271 PRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGE 330
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
I +++ + L + + +A+IDMY KCG RA VF+ + +K + WNSM+ GLA+NG
Sbjct: 331 QIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNG 390
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK-IKPSIKH 360
+ +AI L+ + ++P+ I+F+A+LTAC H+G V++ +F M + + P ++H
Sbjct: 391 FAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEH 450
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+C+VD L ++G L EA K I M +P+A+IW +LLSACR H ++E+AK AA +++ L+
Sbjct: 451 CACIVDLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVLE 510
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
N S YVL+SN+YA + + + E R LM+ ++K S IE+DGEVH F+ H
Sbjct: 511 PNSSSIYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYH 570
Query: 481 PKAPEVYLLLNDLGLLIQ 498
P++ E+Y +++ LGL ++
Sbjct: 571 PRSAEIYNVVDGLGLQLE 588
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 176/354 (49%), Gaps = 45/354 (12%)
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
P + K+ A + G Q H + +G+ D F+ ++ YA G + A + F+E+
Sbjct: 82 PLVLKSCALSAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPI 141
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ D + N +IIG ++ G+++E+RRLFD M + + SWNSMI+ Y +F+EAL LF +
Sbjct: 142 K-DPIPMNCLIIGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQ 200
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + P+ T+ ++ + CAK G + G ++ + N IV TA+++MY KC
Sbjct: 201 MLREGASPNAITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-NVIVHTALMEMYVKCRA 259
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ A + F+ +P++ + W++M+ G + NG +E+++LF ++++N KP+ ++ + VL+A
Sbjct: 260 IDEARREFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSA 319
Query: 332 C-----------------------------------NHSGKVNQAKDYFTLMTETYKIKP 356
C G V +A+D F M + I
Sbjct: 320 CAQLGSDELGEQIGSYIESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIA- 378
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIE 407
++ M+ L G E+A L M D P+ I + +LL+AC G ++
Sbjct: 379 ----WNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACTHAGLVD 428
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 104/270 (38%), Gaps = 38/270 (14%)
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R LFD + + +S + +E +E + + + +L +CA
Sbjct: 31 ARHLFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLHRRGGAIPSGCIPLVLKSCAL 90
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK------------------------- 268
A QG H + + V TA++D Y K
Sbjct: 91 SAASCQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIKDPIPMNCL 150
Query: 269 ------CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
G E A ++F+++P+K + WNSM+ A G EA+ LF + P+
Sbjct: 151 IIGYSRSGDVEEARRLFDSMPRKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNA 210
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
I+ V + C +G + + ++E ++ I H + M + + ++EA +
Sbjct: 211 ITITTVFSICAKTGDLETGRRAKAWVSEE-DLQNVIVHTALM-EMYVKCRAIDEARREFD 268
Query: 383 SMPSDPDAIIWGSLLSA----CRKHGNIEM 408
MP D + W ++++ R H ++E+
Sbjct: 269 RMPRR-DVVAWSTMIAGYSHNGRPHESLEL 297
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 159/454 (35%), Positives = 259/454 (57%), Gaps = 41/454 (9%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
AYLVF ++++ + WNTII Q+ + I+ +ML S ++ TY S+ KA A
Sbjct: 385 AYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEML-RSGMEADDFTYGSVLKACA 443
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
L G +HG+ +K GL D F+ +T++ MY
Sbjct: 444 GLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYC------------------------- 478
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
KCG I E+ +L D++ + VSWNS+I+G+ N + +EA + F EM + +KP
Sbjct: 479 -------KCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKP 531
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
FT ++L++CA L I G+ IH ++ + + + ++DMY KCG + +F
Sbjct: 532 DHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMF 591
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
V K WN+M+ G A++G EA+++F Q +N+ P++ +F+AVL AC+H G ++
Sbjct: 592 EKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLD 651
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
YF LMT YK++P ++H++CM +EA K IRSMP + DA+IW +LLS
Sbjct: 652 DGCRYFHLMTSRYKLEPQLEHFACMGP--------QEALKFIRSMPLEADAVIWKTLLSI 703
Query: 400 CRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP 459
C+ ++E+A+ AA ++ LD ++S Y+L+SN+YA S ++ + R LM++ +++KEP
Sbjct: 704 CKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEP 763
Query: 460 GCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
GCS IEV E+H F+ G ++HP++ EVY +LN+L
Sbjct: 764 GCSWIEVQSEMHGFLVGEKVHPRSREVYEMLNNL 797
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 113/524 (21%), Positives = 215/524 (41%), Gaps = 86/524 (16%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+++HAH IK + D + + I+ + A + A F + + N ++ G +
Sbjct: 265 RQLHAHAIKNKFSSDRVVGTAIVDV-YAKADSLVDARRAFFGLPNHTVETCNAMMVGLVR 323
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ A+ LF + S I ++ +F A A++ +G + D
Sbjct: 324 TGLGAEAMQLF-QFMTRSGIGFGVVSLSGVFSACAEV---------------KGFDVDVC 367
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N I+ +Y C L EA L+F E++ + D V+WN++I L +
Sbjct: 368 VRNAILDLYGKCKALVEAYLVFQEME-QRDSVSWNTIIAALEQ----------------- 409
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N +++ + EM ++ +FT S+L ACA L ++ G +H
Sbjct: 410 --------------NECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVH 455
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + L+ V + ++DMYCKCG AL++ + + + L WNS++ G ++N
Sbjct: 456 GKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSE 515
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA K FS + +KPD+ ++ VL +C + + K + + + S +
Sbjct: 516 EAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFIS-STL 574
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN----IEMAKQAAKQIIELD 420
VD + G + +++ + + D + W +++ HG +EM ++ K + +
Sbjct: 575 VDMYAKCGNMPDSQLMFEKV-QKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPN 633
Query: 421 K----------------NESCGYV-LMSNLYAASYQFEE-----AMEERLLMKEVKIEKE 458
++ C Y LM++ Y Q E E ++ + +E +
Sbjct: 634 HATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFACMGPQEALKFIRSMPLEAD 693
Query: 459 P-------GCSLIEVDGEVHEFVAGG--RLHPKAPEVYLLLNDL 493
I D EV E A RL P VY+LL+++
Sbjct: 694 AVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNV 737
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 6/224 (2%)
Query: 82 SPIQPQRL---TYPSLFKAYAQLGLAR--DGAQLHGRVVKQGLEFDQFIHNTIIYMYANC 136
+P Q L T+ +++ A G + G H R++ G F+ N ++ MYA C
Sbjct: 20 TPAQAAFLATATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARC 79
Query: 137 GFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGY 196
G + A +FD + D V+WN+M+ A G+ + L M + VSWN+++SGY
Sbjct: 80 GGAAHAHGVFDTMPHR-DTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGY 138
Query: 197 VRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNT 256
+ F++ + L EM + P T+ LL AC L + G IH V E++
Sbjct: 139 CQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDV 198
Query: 257 IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+A++DMY KC E AL F+ + ++ W +++ G N
Sbjct: 199 RAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQN 242
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 159/393 (40%), Gaps = 71/393 (18%)
Query: 8 HAH-LIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
HAH + T +D ++ + +L + GD A + + P++ WN ++ G+ Q
Sbjct: 84 HAHGVFDTMPHRDTVSWNTMLT-AYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRG 142
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
R+ + L I+M + P R T L KA L G Q+H VK GLE D
Sbjct: 143 MFRDLVGLSIEM-ARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAG 201
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+ ++ MY KC ++++ F M RN+
Sbjct: 202 SALVDMYG--------------------------------KCRSLEDALHFFHGMGERNS 229
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
VSW ++I+G V+N ++ LEL L C + + +H
Sbjct: 230 VSWGAVIAGCVQNEQYMRGLEL-------------------LCRCKAITCLSTARQLHAH 270
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ N F + +V TAI+D+Y K A + F +P + N+M+ GL G EA
Sbjct: 271 AIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEA 330
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
++LF + S + +S V +AC + + + ++ + ++D
Sbjct: 331 MQLFQFMTRSGIGFGVVSLSGVFSACAE--------------VKGFDVDVCVR--NAILD 374
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
G+ L EA + + M D++ W ++++A
Sbjct: 375 LYGKCKALVEAYLVFQEM-EQRDSVSWNTIIAA 406
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 84/219 (38%), Gaps = 33/219 (15%)
Query: 213 QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP 272
Q + + F+ V L A A A+ G+ H ++ + F V ++ MY +CG
Sbjct: 23 QAAFLATATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGA 82
Query: 273 ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK---------------LFSG----- 312
A VF+T+P + WN+M+ A G A L SG
Sbjct: 83 AHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRG 142
Query: 313 -----------LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+ + PD + +L AC + L +T ++ ++
Sbjct: 143 MFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKT-GLEMDVRAG 201
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSAC 400
S +VD G+ LE+A M + +++ WG++++ C
Sbjct: 202 SALVDMYGKCRSLEDALHFFHGM-GERNSVSWGAVIAGC 239
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 173/499 (34%), Positives = 279/499 (55%), Gaps = 35/499 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQI-KKPNLFIWNTIIRGFS 63
+++HA L+ +GL D + A+R++ S G ++ A +F ++ + N+F+WN +IR ++
Sbjct: 83 RQLHARLLVSGLGLDAVLATRLVDLYAS-CGLVSVARRLFDEMPNQGNVFLWNVLIRAYA 141
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ AI L+ +ML ++P TYP + KA A L G ++H RV++ D
Sbjct: 142 RDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADV 201
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ +I MYA KCG +DE+ +FD
Sbjct: 202 FVCAGLIDMYA--------------------------------KCGCVDEAWAVFDSTTV 229
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ V WNSMI+ +N + EAL L R M + I P+ T+VS ++A A GA+ +G +
Sbjct: 230 RDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGREL 289
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H + F + T+++DMY K G A +F+ + + L WN+M+ G M+G+
Sbjct: 290 HGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHA 349
Query: 304 NEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+ A +LF +++ + + PD+I+F+ VL+ACNH G V +AK+ F LM Y IKP ++HY+
Sbjct: 350 DHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYT 409
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C+VD LG +G +EA +I+ M PD+ IWG+LL+ C+ H N+E+A+ A ++IEL+
Sbjct: 410 CLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPE 469
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
++ YVL+SN+YA S ++EEA R LM ++K CS IE+ G+ H F+ G HP+
Sbjct: 470 DAGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPR 529
Query: 483 APEVYLLLNDLGLLIQEMG 501
+ E+Y L L LI + G
Sbjct: 530 SDEIYEELERLEGLISQTG 548
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 164/397 (41%), Gaps = 78/397 (19%)
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
Y ++ ++ R G QLH R++ GL D + ++ +YA+CG +S AR +FDE+
Sbjct: 66 YATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMP 125
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
+ +V WN +I Y R+ + A+EL+R
Sbjct: 126 NQGNVFLWN-------------------------------VLIRAYARDGPREAAIELYR 154
Query: 211 EMQE-QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
EM +++P FT +L ACA L + G +H+ ++ + + V +IDMY KC
Sbjct: 155 EMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKC 214
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI--- 326
GC + A VF++ + WNSM+ NG EA+ L + + + P ++ +
Sbjct: 215 GCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAI 274
Query: 327 --------------------------------AVLTACNHSGKVNQAKDYFTLMTETYKI 354
++L SG V A+ F + I
Sbjct: 275 SAAADAGALPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELI 334
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD----PDAIIWGSLLSACRKHGNIEMAK 410
++ M+ G G + A +L R M ++ PD I + +LSAC G ++ AK
Sbjct: 335 S-----WNAMICGFGMHGHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAK 389
Query: 411 QAAKQIIELD--KNESCGYVLMSNLYAASYQFEEAME 445
+ ++ + K Y + ++ S +F+EA +
Sbjct: 390 EVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASD 426
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 173/560 (30%), Positives = 289/560 (51%), Gaps = 76/560 (13%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
LK+IHA ++ + K S+I+ D+ YA LVF Q+ KPN++ +N ++RG +
Sbjct: 49 LKQIHAQMLINSIPKPNFLLSKIIDL-----KDLAYASLVFNQLTKPNIYAFNVMLRGLA 103
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ + + L + ++ TYP LF A + G H V K GL+ D+
Sbjct: 104 TTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDE 163
Query: 124 FIHNTIIYM-------------------------------YANCGFLSEARLMFDEVDTE 152
++++++I M Y+ GF EA +F E+ E
Sbjct: 164 YVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREE 223
Query: 153 ---------------------FDVVAW-----------------NSMIIGLAKCGEIDES 174
+ W +++I KCG++ +
Sbjct: 224 GFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISA 283
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
RR+FD M +++ V+WN++I+GY +N EA+ LF M+E P TM+ +L+AC+ +
Sbjct: 284 RRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTI 343
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
GA+ G+W+ + + V +A+IDMY KCG + A++VF ++P K WN+M+
Sbjct: 344 GALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMI 403
Query: 295 FGLAMNGYENEAIKLFSGLQSSN--LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
LA +G EA+ LF + N ++P+ I+FI VL+AC H+G V++ + F M ++
Sbjct: 404 SALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSF 463
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+ P ++HYSCMVD RAGLL EA LI+ MP PD I+ GSLL AC++ N ++ ++
Sbjct: 464 GLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERV 523
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
+ +E++ + S YV+ S +YA +++++ + R+LM++ + K PGCS I++ VHE
Sbjct: 524 IQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHE 583
Query: 473 FVAGGRLHPKAPEVYLLLND 492
F AG LH + +Y LLN+
Sbjct: 584 FHAGDSLHNHSMNIYQLLNE 603
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 270/484 (55%), Gaps = 3/484 (0%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+HA +++ D A ++ + G + A VF + + N W ++I G +Q+
Sbjct: 268 LHARIVRMEPCLDVYAGCGLIDM-YAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAG 326
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A++LF + + P+ + T ++ G QLH + +GL+ +
Sbjct: 327 FQEEALVLF-NQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVA 385
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N ++ MYA CG + +A F+ + D+++W +MI ++ G+++++R FDKM RN
Sbjct: 386 NALVTMYAKCGDVWKANHAFELMPIR-DIISWTAMITAFSQAGDVEKAREYFDKMPERNV 444
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
+SWNSM++ Y++ ++E L+++ +M + +K T + ++ACA L + G I
Sbjct: 445 ISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQ 504
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
F N V +++ MY +CG E A ++F+++ K L WN+M+ G A NG +
Sbjct: 505 AEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKV 564
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
I++F + + PD IS+++VL+ C+HSG V++ + YF MT+ + I P +H+ CMVD
Sbjct: 565 IEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVD 624
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGRAG LE+A+ LI MP P+A IWG+LL+ACR HGN ++A+ A K ++ELD
Sbjct: 625 LLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGS 684
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
Y L++N+Y+ S + + R LM++ + K PGCS IEVD VH F HP+ +V
Sbjct: 685 YCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQIKDV 744
Query: 487 YLLL 490
+ +L
Sbjct: 745 HRML 748
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 195/415 (46%), Gaps = 12/415 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+HA LI GL K I L S G I+ AY VF I PN++ WNT+I GF+
Sbjct: 24 RKLHAQLIFMGL-KSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFAD 82
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLT--------YPSLFKAYAQLGLARDGAQLHGRVVK 116
S R A LF M + + + KA LG + QLHG K
Sbjct: 83 SGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYLKLALQLHGFAEK 142
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
D + +++ MY CG + A+ +F + WNSMI G +K G + ++
Sbjct: 143 FDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNP-SLFCWNSMIYGYSKYGSVKKALE 201
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
LF KM R+TVSWN+MIS ++ E L F EM Q +P+ T S+L+AC +
Sbjct: 202 LFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYD 261
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G +H +V L+ +IDMY KCG E A QVF+ + + W S++ G
Sbjct: 262 LEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGG 321
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
+A G++ EA+ LF+ ++ + D + VL C S K + T T +
Sbjct: 322 VAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVC-LSQKDISIGEQLHAHTITRGLDS 380
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
S+ + +V + G + +A MP D I W ++++A + G++E A++
Sbjct: 381 SVPVANALVTMYAKCGDVWKANHAFELMPIR-DIISWTAMITAFSQAGDVEKARE 434
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
+ CA L +I +H L+ + + + +++MY CG A +VF + +
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG------KVNQA 341
WN+M+ G A +G EA KLF + + D +S+ ++++ H+G K + +
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMP----ERDSVSWNSMMSGYFHNGELEATIKASGS 126
Query: 342 KDYFTL------MTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
Y L E + + ++D + G ++ A+K+ P +P W S
Sbjct: 127 LGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTP-NPSLFCWNS 185
Query: 396 LLSACRKHGNIEMAKQAAKQIIELD 420
++ K+G+++ A + ++ E D
Sbjct: 186 MIYGYSKYGSVKKALELFAKMPERD 210
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 258/451 (57%), Gaps = 8/451 (1%)
Query: 51 NLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQL 110
N I + RGF Q + L + +V+S I+ TYPS+ +A A GL + G Q+
Sbjct: 255 NAMISGYVNRGFYQEA------LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
H V+++ +F N+++ +Y CG EAR +F+++ + D+V+WN+++ G G
Sbjct: 309 HAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGH 366
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
I E++ +F +M +N +SW MISG N +E L+LF M+ + +P ++ + +
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA LGA G+ H L+ F+ + A+I MY KCG E A QVF T+P W
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N+++ L +G+ EA+ ++ + ++PD I+ + VLTAC+H+G V+Q + YF M
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
Y+I P HY+ ++D L R+G +AE +I S+P P A IW +LLS CR HGN+E+
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
AA ++ L Y+L+SN++AA+ Q+EE R LM++ ++KE CS IE++ +V
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
H F+ HP+A VY+ L DLG ++ +G
Sbjct: 667 HTFLVDDTSHPEAEAVYIYLQDLGKEMRRLG 697
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 161/359 (44%), Gaps = 50/359 (13%)
Query: 101 LGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNS 160
L LAR +HG ++ G + I N +I +Y L+ AR +FDE+ +E D +A +
Sbjct: 30 LQLAR---AVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEI-SEPDKIARTT 85
Query: 161 MIIGLAKCGEIDESRRLFDK--MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
M+ G G+I +R +F+K + R+TV +N+MI+G+ N A+ LF +M+ + K
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 219 PSEFTMVSLLNACAKLGAI-RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP----E 273
P FT S+L A + +Q H + + T V A++ +Y KC
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYEN----------------------------- 304
A +VF+ + +K W +M+ G NGY +
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 305 ---EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY--FTLMTETYKIKPSIK 359
EA+++ + SS ++ D ++ +V+ AC +G + K + L E + S
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF----SFH 321
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ +V + G +EA + MP+ D + W +LLS G+I AK K++ E
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPA-KDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 117/299 (39%), Gaps = 64/299 (21%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM---------------- 78
G + A +F ++ +L WN ++ G+ S A L+F +M
Sbjct: 334 GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393
Query: 79 --------------LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ +P + K+ A LG +G Q H +++K G +
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLS 453
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
N +I MYA CG + EAR +F + D V+WN++I L + G
Sbjct: 454 AGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGH-------------- 498
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG-EWI 243
EA++++ EM ++ I+P T++++L AC+ G + QG ++
Sbjct: 499 -----------------GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF 541
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
+ +ID+ C+ G A V ++P K W +++ G ++G
Sbjct: 542 DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/455 (34%), Positives = 258/455 (56%), Gaps = 2/455 (0%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A +F + + WN +I G++Q+ A+ F ML S + P T S+
Sbjct: 242 GRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSV 301
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR-LMFDEVDTEF 153
A A LG+ G Q+H +++ + + + N +I MYA G + AR +M V +
Sbjct: 302 LSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADL 361
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+V+++ +++ G K G++ +R +FD M +R+ V+W +MI GY +N EA+ELFR M
Sbjct: 362 NVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMI 421
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
+P+ +T+ ++L+ CA L + G+ IH + + E ++ V +I+ MY + G
Sbjct: 422 RSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLP 481
Query: 274 RALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTAC 332
A +VF+ V +K W SM+ LA +G +A+ LF + +KPD I+F+ VL+AC
Sbjct: 482 WARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSAC 541
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
H G V++ K YF + + + I P + HY+CMVD L RAGL EA++ I+ MP +PDAI
Sbjct: 542 THVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIA 601
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
WGSLLSACR H N ++A+ AA++++ +D S Y +SN+Y+A ++ +A + K+
Sbjct: 602 WGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKD 661
Query: 453 VKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVY 487
++KE G S + VH F A LHP+ VY
Sbjct: 662 KSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVY 696
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 222/486 (45%), Gaps = 76/486 (15%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ +G + A VF ++ + + W ++ G ++ AI +F+DM VT + P + T
Sbjct: 107 AKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDM-VTDGLSPTQFTL 165
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
++ + A G ++H VVK GL + N+++ MY CG AR +F+ +
Sbjct: 166 TNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERM-P 224
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF-R 210
E V +WN+M+ A G +D + LF+ M R VSWN++I+GY +N +AL F R
Sbjct: 225 ERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSR 284
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL----------VTNCF-------- 252
+ + P EFT+ S+L+ACA LG + G+ +H ++ VTN
Sbjct: 285 MLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSG 344
Query: 253 ---------------ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
+LN I TA+++ Y K G + A ++F+ + + + W +M+ G
Sbjct: 345 SVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWTAMIVGY 404
Query: 298 AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT-----ACNHSGKVNQAKDYFTLMTETY 352
NG+ +EA++LF + S +P+ + AVL+ AC GK K +L ++
Sbjct: 405 EQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSS 464
Query: 353 KIKPSI--------------------------KHYSCMVDALGRAGLLEEAEKLIRSM-- 384
+ SI ++ M+ AL + GL E+A L M
Sbjct: 465 SVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLR 524
Query: 385 -PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN----ESCGYVLMSNLYAASYQ 439
PD I + +LSAC G ++ K+ +Q+ DK+ E Y M +L A +
Sbjct: 525 VGVKPDRITFVGVLSACTHVGFVDEGKRYFQQL--QDKHGIVPEMSHYACMVDLLARAGL 582
Query: 440 FEEAME 445
F EA E
Sbjct: 583 FSEAQE 588
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 175/352 (49%), Gaps = 23/352 (6%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGF-----LSEARLMFDEVDT-EFDVVAWNS 160
G +H R VK GL ++ N ++ YA EAR +FDE+ + +V WNS
Sbjct: 42 GRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNS 101
Query: 161 MIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPS 220
++ AK G + ++R +F +M R+ VSW M+ G R +F EA+++F +M + P+
Sbjct: 102 LLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLSPT 161
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
+FT+ ++L++CA A G +H+F+V V ++++MY KCG E A VF
Sbjct: 162 QFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFE 221
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
+P++ +S WN+MV A G + A+ LF + + +S+ AV+ N +G +
Sbjct: 222 RMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTI----VSWNAVIAGYNQNGLNAK 277
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK----LIRS-MPSDPDAIIWGS 395
A +F+ M + P + ++ A G++ ++ ++RS MP + +
Sbjct: 278 ALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQ--VTNA 335
Query: 396 LLSACRKHGNIEMAKQAAKQIIELDKNESC------GYVLMSNLYAASYQFE 441
L+S K G++E A+ +Q + D N GYV + ++ A F+
Sbjct: 336 LISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFD 387
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 233/379 (61%), Gaps = 2/379 (0%)
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D ++ + ++ YA G L+E+R +FDE+ D A N+++ A+CG +D++ LF M
Sbjct: 118 DPYLASALVASYARSGHLAESRRVFDELPPHSDAAARNALLSAYARCGRVDDAESLFAGM 177
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQG 240
RN +SW +M+SGY +N + +EA+ F EM E ++P+E T+ S+L ACA +GA+ G
Sbjct: 178 PDRNVISWTAMVSGYAQNGRHEEAVRTFLEMWEGCGVRPNEVTVSSVLPACAAVGALALG 237
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK-KGLSCWNSMVFGLAM 299
+ + N V A+++MY KCG RA VF + K + L WNSM+ A+
Sbjct: 238 RKVERYARGRGMLTNVYVANALVEMYAKCGSIRRAWMVFRGIGKQRDLCSWNSMIMAFAV 297
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G E + LF L+ + KPD I+F+ V+ AC H G V++ K F M E + +KP I+
Sbjct: 298 HGLWREVLGLFHKLRMTGAKPDGITFVGVILACTHGGLVDEGKLLFNSMREEFGLKPRIE 357
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAGLL+EA+ LI SMP +PDA+IWG+LL AC HGN+E+A+ A ++++ L
Sbjct: 358 HYGCMVDLLGRAGLLKEADSLIASMPMEPDAVIWGALLGACSFHGNLELAEVAVEKLMRL 417
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ + V++SN+YA+ +++ + L+KE +K G S IE+DG +H+F+ +
Sbjct: 418 EPQNTANLVILSNIYASHGKWDGVAQVWKLLKEKDHKKSAGYSFIELDGRMHKFLVEDKS 477
Query: 480 HPKAPEVYLLLNDLGLLIQ 498
HP VY L+ + L+++
Sbjct: 478 HPIYEMVYDTLDSITLIMK 496
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/471 (33%), Positives = 267/471 (56%), Gaps = 6/471 (1%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G+++ A + + + WN +I G+ A+ +F M + IQ TY S+
Sbjct: 239 GELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLG-IQWDEFTYTSV 297
Query: 95 FKAYAQLGLARDGAQLHGRVVKQ----GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
A A G G Q+H +++ L+F ++N + +Y CG + EAR +F+++
Sbjct: 298 LSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMP 357
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
+ D+V+WN+++ G G IDE++ F++M RN ++W MISG +N +E+L+LF
Sbjct: 358 VK-DLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFN 416
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
M+ + +P ++ + ACA L A+ G +H LV F+ + A+I MY KCG
Sbjct: 417 RMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCG 476
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
E A +F T+P WN+M+ L +G+ +A++LF + ++ PD I+F+ VL+
Sbjct: 477 VVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLS 536
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
C+H+G V + YF M+ Y I P HY+ M+D L RAG EA+ +I +MP +P
Sbjct: 537 TCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGP 596
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
IW +LL+ CR HGN+++ QAA+++ EL YVL+SN+YA ++++ + R LM
Sbjct: 597 PIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLM 656
Query: 451 KEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
++ ++KEPGCS IEV+ +VH F+ +HP+ VY L +LGL ++++G
Sbjct: 657 RDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLG 707
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 213/446 (47%), Gaps = 51/446 (11%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVF--TQIKKPNLFIWNTIIRGFSQ 64
+ AH + + + I A L S AG+ N A +F T + + +N +I G+S
Sbjct: 67 VSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSH 126
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL-GLARDGAQLHGRVVKQGLEFDQ 123
++ AI LF D+L + +P T+ S+ A A + + Q+H VVK G F
Sbjct: 127 NNDGFGAIELFRDLL-RNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVT 185
Query: 124 FIHNTIIYMYANCGF---------LSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES 174
+ N ++ ++ C ++ AR +FDE+ TE D ++W +MI G + GE+D +
Sbjct: 186 SVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEM-TERDELSWTTMIAGYVRNGELDAA 244
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
R+ D M + V+WN+MISGYV + F EALE+FR+M I+ EFT S+L+ACA
Sbjct: 245 RQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANA 304
Query: 235 GAIRQGEWIHNFLVTN----CFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
G G+ +H +++ + + V A+ +Y KCG + A QVFN +P K L W
Sbjct: 305 GFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSW 364
Query: 291 NS-------------------------------MVFGLAMNGYENEAIKLFSGLQSSNLK 319
N+ M+ GLA NG+ E++KLF+ ++S +
Sbjct: 365 NAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFE 424
Query: 320 PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
P +F + AC + + + S+ + ++ + G++E A
Sbjct: 425 PCDYAFAGAIIACAWLAALMHGRQLHAQLVRL-GFDSSLSAGNALITMYAKCGVVEAAHC 483
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHGN 405
L +MP D++ W ++++A +HG+
Sbjct: 484 LFLTMPY-LDSVSWNAMIAALGQHGH 508
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 162/356 (45%), Gaps = 50/356 (14%)
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
+H ++ G + +I N +I +Y L A +FDE+ + D+VA ++I + G
Sbjct: 37 VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEI-RQPDIVARTTLIAAHSSAG 95
Query: 170 EIDESRRLF--DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
+ +R +F + R+TV +N+MI+GY N A+ELFR++ +P FT S+
Sbjct: 96 NSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSV 155
Query: 228 LNACAKLGAI-RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC----------------- 269
L A A + +Q + IH +V + T V+ A++ ++ KC
Sbjct: 156 LGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARK 215
Query: 270 -----------------------GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
G + A Q + + +K + WN+M+ G +G+ EA
Sbjct: 216 LFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEA 275
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+++F + ++ D ++ +VL+AC ++G K + T + +PS+ + +
Sbjct: 276 LEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRT-EPRPSLDFSLSVNN 334
Query: 367 ALG----RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
AL + G ++EA ++ MP D + W ++LS G I+ AK +++ E
Sbjct: 335 ALATLYWKCGKVDEARQVFNQMPV-KDLVSWNAILSGYVNAGRIDEAKSFFEEMPE 389
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 270/497 (54%), Gaps = 37/497 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA +K GL D + S G +N AY VF ++ NL WN I
Sbjct: 128 KQLHALAVKEGLINDVFVGCSVFDM-YSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVL 186
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA-QLGLARDGAQLHGRVVKQGLEFDQ 123
P ++++ FI++L +P +T+ + A + +LGL G QLHG +++ G +
Sbjct: 187 HGRPEDSVIAFIELLRVGG-KPDSITFCAFLNACSDKLGLG-PGCQLHGFIIRSGYGQNV 244
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ N +I Y KCGE++ S +FD+M
Sbjct: 245 SVSNGLIDFYG--------------------------------KCGEVECSEMVFDRMGE 272
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
RN+VSW+S+I+ YV+N + ++A LF ++++I+P++F + S+L ACA L I G +
Sbjct: 273 RNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSV 332
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
V C E N V +A++DMY KCG + A Q FN +P++ L WN+++ G A G+
Sbjct: 333 QALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHA 392
Query: 304 NEAIKLFSGLQSS-NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
N+A+ L + S+ + P Y+S I L+AC+ +G + F M E Y ++P +HY+
Sbjct: 393 NKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYA 452
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C+VD LGRAG++E A I+ MP P IWG+LL ACR HG E+ K AA+++ ELD
Sbjct: 453 CLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPK 512
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+S +V++SN++AA+ ++EE R MKEV I+K G S I VD +H F A + H K
Sbjct: 513 DSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEK 572
Query: 483 APEVYLLLNDLGLLIQE 499
PE+ +L L +Q+
Sbjct: 573 DPEIQDILGKLRKEMQD 589
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 131/273 (47%), Gaps = 8/273 (2%)
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
T F +N ++ AK ++ ++ + + R+ V+W ++I+G V+N F AL F
Sbjct: 38 TPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFS 97
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M ++P++FT +L A L G+ +H V + V ++ DMY K G
Sbjct: 98 DMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLG 157
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
A +VF+ +P + L WN+ + ++G +++ F L KPD I+F A L
Sbjct: 158 FLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLN 217
Query: 331 ACNHS-GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
AC+ G + + ++ Y S+ + ++D G+ G +E +E + M + +
Sbjct: 218 ACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNG--LIDFYGKCGEVECSEMVFDRM-GERN 274
Query: 390 AIIWGSLLSACRKHGNIEMAK----QAAKQIIE 418
++ W SL++A ++ E A +A K+ IE
Sbjct: 275 SVSWSSLIAAYVQNNEEEKASCLFLRARKEDIE 307
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/446 (34%), Positives = 262/446 (58%), Gaps = 3/446 (0%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K+ +++H H+IK G D I S L + + G + A VF ++ ++ WN++I G
Sbjct: 957 KEGEQMHNHVIKLGFLLD-IFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGG 1015
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+SQ + + + LF ++ +Q ++T + A LG + + +E
Sbjct: 1016 YSQHNRLKEVLTLF-KLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEV 1074
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D ++ NT+I Y G L A +F ++ + + V N+MI AK G + ++++FD++
Sbjct: 1075 DVYLGNTLIDYYCRIGQLQSAEKVFSQMKDK-NTVTLNAMITAYAKGGNLVSAKKIFDQI 1133
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+++ +SW+SMI Y + F ++LELFR+MQ +KP + S+L+ACA LGA+ G+
Sbjct: 1134 PNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGK 1193
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
WIH+++ N + +TI+ ++IDM+ KCGC + ALQVF + +K WNS++ GLA NG
Sbjct: 1194 WIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNG 1253
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+E+EA+ +F + + +P+ ++F+ VL AC + V + D+F M + ++P +KHY
Sbjct: 1254 FEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHY 1313
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
C+VD L RAG LE+A I MP PD ++W LL ACR HGN+ +A+ A K++ ELD
Sbjct: 1314 GCVVDILSRAGQLEKAVSFISEMPLAPDPVVWRILLGACRTHGNVAVAEMATKKLSELDP 1373
Query: 422 NESCGYVLMSNLYAASYQFEEAMEER 447
S +L+SN+YA++ ++ +AM R
Sbjct: 1374 GNSADSMLLSNIYASADRWSDAMNVR 1399
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/419 (35%), Positives = 236/419 (56%), Gaps = 8/419 (1%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A VF Q P W ++ +S P A+ LF + + + KA A
Sbjct: 437 ALKVFDQSPAP----WRAFLKAYSHGPFPLEALHLFKH--ARQHLADDTFVFTFVLKACA 490
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
LG R GAQLH VV++G EF ++H +I +Y L EAR +FDE+ + +VV+WN
Sbjct: 491 GLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVK-NVVSWN 549
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
MI G A GE++ +R LFD+M RN VSW +I GY R + EAL L R M I P
Sbjct: 550 VMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISP 609
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
SE T+++++ A + LG I GE ++ + + V ++ID+Y K G + +L+VF
Sbjct: 610 SEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVF 669
Query: 280 N-TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
+ + ++ L W S++ G AM+G EA++LF+ ++ + +KP+ I+F++V+ AC+H G V
Sbjct: 670 DEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLV 729
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
Q +F M Y I P IKH+ C++D LGRAG L EAE++I +P + + +W LL
Sbjct: 730 EQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLG 789
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEK 457
C K+G + M ++A K I +L++ + ++SN+ +F +A + R L+ + KI K
Sbjct: 790 CCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVK 848
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 214/435 (49%), Gaps = 66/435 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M+ +KK+HAHL+ +GL A S+++ D+ A+ VF QI+ P F+WNT++R
Sbjct: 854 MEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLR 913
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G +QS P++AI +F ++P LT+P + KA A+ ++G Q+H V+K G
Sbjct: 914 GLAQSDAPKDAI-VFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFL 972
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ N++IY+YA CG L+ AR +F+E+ + DVV+WNS
Sbjct: 973 LDIFVSNSLIYLYAACGALACARSVFNEMLVK-DVVSWNS-------------------- 1011
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+I GY ++ + KE L LF+ MQ + ++ + TMV +++AC LG
Sbjct: 1012 -----------LIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMA 1060
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF------NTV------------ 282
+ + ++ N E++ + +ID YC+ G + A +VF NTV
Sbjct: 1061 DCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKG 1120
Query: 283 -------------PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
P K L W+SM+ + + +++++LF +Q + +KPD + +VL
Sbjct: 1121 GNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVL 1180
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
+AC H G ++ K + IK + ++D + G ++EA ++ M + D
Sbjct: 1181 SACAHLGALDLGK-WIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDM-EEKD 1238
Query: 390 AIIWGSLLSACRKHG 404
+ W S++ +G
Sbjct: 1239 TLSWNSIILGLANNG 1253
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 166/350 (47%), Gaps = 36/350 (10%)
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
+LH +V GL Q+ + +I +YA L ++ L+
Sbjct: 859 KLHAHLVVSGLHNCQYAMSKVIRLYA----LHQSDLV----------------------- 891
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
+ ++F ++ S T WN+++ G ++ K+A+ +++ QE+ +KP T +L
Sbjct: 892 ----SAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVL 947
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
ACAK A ++GE +HN ++ F L+ V ++I +Y CG A VFN + K +
Sbjct: 948 KACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVV 1007
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WNS++ G + + E + LF +Q+ ++ D ++ + V++AC H G + A D
Sbjct: 1008 SWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMA-DCMVRY 1066
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
E I+ + + ++D R G L+ AEK+ M D + + ++++A K GN+
Sbjct: 1067 IEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQM-KDKNTVTLNAMITAYAKGGNLVS 1125
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKE 458
AK+ QI D + M Y+ + F +++E M+ K++ +
Sbjct: 1126 AKKIFDQIPNKDL---ISWSSMICAYSQASHFSDSLELFRQMQRAKVKPD 1172
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 138/318 (43%), Gaps = 48/318 (15%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G++ YA L+F Q+ N+ W +I G++++ A+ L M+ I P +T ++
Sbjct: 559 GEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGG-ISPSEITVLAV 617
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
A + LG G L+G K+G+ D + N++I +YA G + + +FDE+ +
Sbjct: 618 IPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRN 677
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+V+W S+I G A G EALELF EM+
Sbjct: 678 LVSWTSIISGFAMHG-------------------------------LSVEALELFAEMRR 706
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV----VTAIIDMYCKCG 270
IKP+ T +S++NAC+ G + QG F + +E N IIDM + G
Sbjct: 707 AGIKPNRITFLSVINACSHGGLVEQGL---AFFKSMVYEYNIDPEIKHFGCIIDMLGRAG 763
Query: 271 CPERALQVFNTVPKK-GLSCWNSMV-----FGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
A Q+ +P + ++ W ++ +G G AIK+ S L+ + D+
Sbjct: 764 RLCEAEQIIEGLPMEVNVTVWRILLGCCSKYGEVAMG--ERAIKMISDLERES-GGDFAV 820
Query: 325 FIAVLTACNHSGKVNQAK 342
VLT QA+
Sbjct: 821 LSNVLTELGRFSDAEQAR 838
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 259/459 (56%), Gaps = 38/459 (8%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G ++ A VF ++ N+ W T+I +S + A L F+ +++ ++P TY S+
Sbjct: 14 GLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKA-LEFLVLMLREGVRPNMFTYSSV 72
Query: 95 FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFD 154
+A L R QLH ++K GL+ D F+ + +I +Y+
Sbjct: 73 LRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYS-------------------- 109
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+ GE++ + R+FD+MV+ + V W+S+I+G+ +N EAL LF+ M+
Sbjct: 110 ------------RWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKR 157
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+ T+ S+L AC L + G +H ++ ++ + I+ A++DMYCKCG E
Sbjct: 158 AGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLED 215
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VF + +K + W++M+ GLA NGY EA+KLF ++ +KP+Y++ + VL AC+H
Sbjct: 216 ANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSH 275
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
+G V + YF M E + I P +HY CM+D LGRAG L EA LI M +PDA+ W
Sbjct: 276 AGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWR 335
Query: 395 SLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
+LL+ACR H N+++A AAKQI+ LD ++ YVL+SN+YA + ++ + E R M
Sbjct: 336 ALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRG 395
Query: 455 IEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
I+KEPGCS IEV ++H F+ G R HP+ E+ + LN L
Sbjct: 396 IKKEPGCSWIEVSKQIHAFILGDRSHPQIREINIQLNQL 434
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 168/378 (44%), Gaps = 50/378 (13%)
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
N +I K G + +++ +FDKM RN VSW +MIS Y +ALE M + ++
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
P+ FT S+L AC L +RQ +H ++ + + V +A+ID+Y + G E AL+V
Sbjct: 64 PNMFTYSSVLRACDGLFNLRQ---LHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN----- 333
F+ + L W+S++ G A N +EA++LF ++ + + +VL AC
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180
Query: 334 --------HSGKVNQAKDYFTLMTETY---------------KIKPSIKHYSCMVDALGR 370
H K +Q + + Y ++ + +S M+ L +
Sbjct: 181 ELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQ 240
Query: 371 AGLLEEAEKLIRSMPS---DPDAIIWGSLLSACRKHGNIEMAK---QAAKQIIELDKNES 424
G +EA KL SM P+ + +L AC G +E + K++ +D
Sbjct: 241 NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGRE 300
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP--------GCSLIE-VDGEVHEFVA 475
Y M +L + + EA++ L+ E++ E + C + VD +H
Sbjct: 301 -HYGCMIDLLGRAGRLSEAVD---LINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQ 356
Query: 476 GGRLHPKAPEVYLLLNDL 493
RL P+ Y+LL+++
Sbjct: 357 ILRLDPQDAGTYVLLSNI 374
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Query: 258 VVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSN 317
++ +I+MY K G A VF+ +P + + W +M+ + ++A++ +
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 318 LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEA 377
++P+ ++ +VL AC+ G N + + ++ + + S ++D R G LE A
Sbjct: 62 VRPNMFTYSSVLRACD--GLFNLRQLHCCII--KIGLDSDVFVRSALIDVYSRWGELENA 117
Query: 378 EKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++ M + D ++W S+++ ++ + + A + K++
Sbjct: 118 LRVFDEMVT-GDLVVWSSIIAGFAQNSDGDEALRLFKRM 155
>gi|297793453|ref|XP_002864611.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
gi|297310446|gb|EFH40870.1| hypothetical protein ARALYDRAFT_496037 [Arabidopsis lyrata subsp.
lyrata]
Length = 534
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/488 (35%), Positives = 280/488 (57%), Gaps = 19/488 (3%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA +I+T +D ++ C S I+YAY VF + PN++++ +I GF S
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVC-STLDSIDYAYDVFRYVSNPNVYLYTAMIDGFVSSG 106
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
+ + L+ M + S + P S+ KA GL + ++H +V+K G + +
Sbjct: 107 RSADGVSLYHRM-IHSSVLPDNYVITSVLKA---CGLD-ECREIHSQVLKLGFGSSRSVG 161
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
++ +Y G L++A+ +FDE+ VVA MI ++CG I E+ LF + ++T
Sbjct: 162 LKLMEIYGKSGELADAKKVFDEMPDRDQVVA-TVMINCYSECGCIKEALELFQDVKIKDT 220
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA-IRQGEWIHN 245
V W +MI G VRN + +ALELFREMQ +S+ A++ G +H+
Sbjct: 221 VCWTAMIDGLVRNREMNKALELFREMQ-----------LSVFYLPARIWVRWSSGAGVHS 269
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
F+ EL+ V A+I+MY +CG A +VF + K + +N+M+ GLAM+G E
Sbjct: 270 FVENQKMELSNFVGNALINMYSRCGDINVAKRVFKGMRDKDVISYNTMISGLAMHGASVE 329
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
AI +F + + +P+ ++ +A+L AC+H G ++ + F M + ++P I+HY C+V
Sbjct: 330 AINVFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMWRVFSVEPQIEHYGCIV 389
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGR G LEEA + I +M +PD I+ G+LLSAC+ HGN+E+ ++ AK++ E + +S
Sbjct: 390 DLLGRVGRLEEAYRFIENMLIEPDHIMLGALLSACKIHGNMELGEKIAKRLFESENPDSG 449
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL+S++YA+S +++E+ E R M+E IEKEPGCS IEVD ++HEF G HP+
Sbjct: 450 TYVLLSHIYASSGKWKESTEIRESMRESGIEKEPGCSTIEVDNQIHEFHVGDIAHPRKEA 509
Query: 486 VYLLLNDL 493
+Y L +L
Sbjct: 510 IYQRLQEL 517
>gi|242032459|ref|XP_002463624.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
gi|241917478|gb|EER90622.1| hypothetical protein SORBIDRAFT_01g003150 [Sorghum bicolor]
Length = 607
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/500 (34%), Positives = 277/500 (55%), Gaps = 39/500 (7%)
Query: 9 AHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNL----FIWNTIIRGFSQ 64
A L+K+GL +P+ +R+ F +S A + + +P++ F+ NT+IR +
Sbjct: 48 AFLLKSGLHANPLVLTRL--FASSAAAAPALLEPLVAALLRPSVPIDAFLVNTLIRAHAA 105
Query: 65 SSTP--RNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL-GLARDGAQLHGRVVKQGLEF 121
S P R F +++ S + P + T+P L KA A L G G Q H +K G
Sbjct: 106 SPLPSARLRAAAFFPLMLRSAVLPNKFTFPFLLKACAALPGFPGVGLQAHAAALKFGFAT 165
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
DQ++ NT+I+MY+ G EF + ++R +FD+M
Sbjct: 166 DQYVSNTLIHMYSCFG-------------GEF-----------------LGDARNVFDRM 195
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+ V+W++MI GYVR +A+ LFREMQ ++P E T++ +L A A LGA+
Sbjct: 196 DKSSVVTWSAMIGGYVRGGLSSDAVGLFREMQASGVRPDEVTVIGVLAAAADLGALELAR 255
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
W+ F+ + + A+ID KCG + A+ VF + ++ + W S++ LAM G
Sbjct: 256 WVGRFVEREGIGKSVTLCNALIDALAKCGDVDGAVAVFQGMEERTVVSWTSVIDALAMEG 315
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
EA+ +F ++++ ++PD + FI VLTAC+H+G V++ YF M Y I P I+HY
Sbjct: 316 RGKEAVAVFEAMKTAGVRPDDVVFIGVLTACSHAGMVDEGYGYFDSMKMEYGIDPKIEHY 375
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
CMVD GRAG++E A + I +MP P+ IIW +L++ACR HG +E+ + + ++
Sbjct: 376 GCMVDMFGRAGMVERAMEFIHTMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEYP 435
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
YV++SN+YA + +++E E R M + I+K PGCSL+E+DGEVHEF+AG HP
Sbjct: 436 AHEANYVMLSNVYALTQRWKEKSEIRREMSKRGIKKVPGCSLVELDGEVHEFIAGDESHP 495
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
+ E+Y+++ ++ ++ +G
Sbjct: 496 QWKEIYMMVEEMARELKHVG 515
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/538 (32%), Positives = 302/538 (56%), Gaps = 42/538 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG--- 61
K IH +LIK G DP +A+ ++ + GD+ A VF +IK+P++ WN +I G
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDM-YAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336
Query: 62 ----------FSQSSTPRNAILLFIDM---LVTS--------------------PIQPQR 88
Q ++ L+ +DM L S + P++
Sbjct: 337 HEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEK 396
Query: 89 --LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMF 146
+ + ++ Y+Q + L + K+G+ F+Q +TI+ A + R +
Sbjct: 397 DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVH 456
Query: 147 D-EVDTEF--DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
V + F D+ NS+I KC ++++ R+F++ + VS+ SMI+ Y + + +
Sbjct: 457 GLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGE 516
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
EAL+LF EMQ+ +KP F SLLNACA L A QG+ +H ++ F L+ +++
Sbjct: 517 EALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLV 576
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
+MY KCG + A + F+ + ++G+ W++M+ GLA +G+ +A++LF+ + + P++I
Sbjct: 577 NMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHI 636
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+ ++VL ACNH+G V +AK YF M E + KP +HY+CM+D LGRAG + EA +L+
Sbjct: 637 TLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNK 696
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
MP + +A +WG+LL A R H ++E+ ++AA+ + L+ +S +VL++N+YA++ ++E
Sbjct: 697 MPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENV 756
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
E R LM++ K++KEPG S IEV +V+ F+ G R H ++ E+Y L++L L+ + G
Sbjct: 757 AEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAG 814
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 185/394 (46%), Gaps = 63/394 (15%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IHAH+ K+GL+ DP + ++ S YA + + +P+L W+ +I G++Q+
Sbjct: 77 QIHAHITKSGLSDDPSIRNHLINL-YSKCRXFGYARKLVDESSEPDLVSWSALISGYAQN 135
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
A++ F +M + ++ T+ S+ KA + + R G Q+HG VV G E D F+
Sbjct: 136 GLGGGALMAFHEMHLLG-VKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
NT++ MY AKC E +S+RLFD++ RN
Sbjct: 195 ANTLVVMY--------------------------------AKCDEFLDSKRLFDEIPERN 222
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSWN++ S YV+ EA+ LF EM IKP+EF++ S++NAC L +G+ IH
Sbjct: 223 VVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+L+ ++ + A++DMY K G A+ VF + + + WN+++ G ++ + +
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A++L G L + K++ D F + +V
Sbjct: 343 ALELL-GQMKRQLHSSLM-------------KMDMESDLFVSVG--------------LV 374
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
D + LLE+A +P + D I W +++S
Sbjct: 375 DMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISG 407
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 155/354 (43%), Gaps = 40/354 (11%)
Query: 65 SSTPRN-AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
S P+ AIL ID P ++Y L R G Q+H + K GL D
Sbjct: 35 SEDPQTTAILNLID---KGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDP 91
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
I N +I +Y+ KC +R+L D+
Sbjct: 92 SIRNHLINLYS--------------------------------KCRXFGYARKLVDESSE 119
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+ VSW+++ISGY +N AL F EM +K +EFT S+L AC+ + +R G+ +
Sbjct: 120 PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQV 179
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H +V + FE + V ++ MY KC + ++F+ +P++ + WN++ +
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFC 239
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK-DYFTLMTETYKIKPSIKHYS 362
EA+ LF + S +KP+ S +++ AC ++ K + L+ Y P +
Sbjct: 240 GEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSA--N 297
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+VD + G L +A + + PD + W ++++ C H + E A + Q+
Sbjct: 298 ALVDMYAKVGDLADAISVFEKI-KQPDIVSWNAVIAGCVLHEHHEQALELLGQM 350
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 200/488 (40%), Gaps = 114/488 (23%)
Query: 1 MKDL---KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
+KDL K++H ++ +G D A+ ++ ++ L F +I + N+ WN
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL-FDEIPERNVVSWNA 228
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+ + Q A+ LF +M V S I+P + S+ A L + G +HG ++K
Sbjct: 229 LFSCYVQXDFCGEAVGLFYEM-VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKL 287
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G ++D F N ++ MYA K G++ ++ +
Sbjct: 288 GYDWDPFSANALVDMYA--------------------------------KVGDLADAISV 315
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
F+K+ + VSWN++I+G V + ++ALEL +M+ Q
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ---------------------- 353
Query: 238 RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGL 297
+H+ L+ E + V ++DMY KC E A FN +P+K L WN+++ G
Sbjct: 354 -----LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 408
Query: 298 AMNGYENEAIKLF----------------------SGLQ---------SSNLKPDYISFI 326
+ + EA+ LF +GLQ ++K + S I
Sbjct: 409 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDI 468
Query: 327 AVLTACNHS-GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL---IR 382
V+ + S GK + +D + E + ++ M+ A + G EEA KL ++
Sbjct: 469 YVVNSLIDSYGKCSHVEDAERIFEEC--TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQ 526
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVL-------MSNLYA 435
M PD + SLL+AC E KQ I++ G+VL + N+YA
Sbjct: 527 DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKY------GFVLDIFAGNSLVNMYA 580
Query: 436 ASYQFEEA 443
++A
Sbjct: 581 KCGSIDDA 588
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 291/535 (54%), Gaps = 45/535 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+ HA I L D I S I+ F S G I A LVF+++ + ++ WN +I + Q
Sbjct: 303 KQGHAIAILNSLDLDNILGSSIINF-YSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQ 361
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A L ++ + ++ +T S+ A A + G + H +++ LE D
Sbjct: 362 HHQVGKA-LNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVV 420
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM--- 181
+ N+II MYA C + +AR +FD TE D+V WN+++ A+ G E+ +LF +M
Sbjct: 421 VANSIIDMYAKCERIDDARKVFDST-TERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFD 479
Query: 182 -VSRNTVSWNSMISGYVRNVKFKEALELF------------------------------- 209
V N +SWNS+I G++RN + EA ++F
Sbjct: 480 SVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEA 539
Query: 210 ----REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
++MQE I+PS ++ S+L AC + ++ G IH F+ + F L+ V T+++DM
Sbjct: 540 ILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDM 599
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y KCG + A +VF+ + K L +N+M+ A++G EA+ LF LQ ++PD I+F
Sbjct: 600 YAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITF 659
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
++L+AC+H+G VN+ + F M + + P ++HY C+V L R G L+EA +LI +MP
Sbjct: 660 TSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMP 719
Query: 386 SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
PDA I GSLL+ACR+H IE+ + +K + +L+ + S YV +SN YAA+ ++ E
Sbjct: 720 FQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSN 779
Query: 446 ERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEM 500
R LMK + K PGCS I+ G+++ FVAG HPK E+Y + L +L+ EM
Sbjct: 780 MRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAM---LAMLLSEM 831
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 195/399 (48%), Gaps = 38/399 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +H +++K G +S ++ G + A VF + + N+ WN++I G+ Q
Sbjct: 202 KGVHGYVLKMGFGACVFVSSSLVDM-YGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQ 260
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ + AI +F DM V I+P R+T S A A L +G Q H + L+ D
Sbjct: 261 NGLNQEAIDVFYDMRVEG-IEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNI 319
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++II Y+ G + +A L +F +M+ +
Sbjct: 320 LGSSIINFYSKVGLIEDAEL--------------------------------VFSRMLEK 347
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V+WN +IS YV++ + +AL + M+ +N++ T+ S+L+A A I+ G+ H
Sbjct: 348 DVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGH 407
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + E + +V +IIDMY KC + A +VF++ ++ L WN+++ A G
Sbjct: 408 CYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSG 467
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA+KLF +Q ++ P+ IS+ +V+ +G+VN+AKD F+ M ++ +P++ ++ +
Sbjct: 468 EALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQM-QSLGFQPNLITWTTL 526
Query: 365 VDALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLLSAC 400
+ L ++G EA + M P S+L AC
Sbjct: 527 ISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLAC 565
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 205/409 (50%), Gaps = 52/409 (12%)
Query: 5 KKIHAHLIKTG--LAKDPIAASRILAF---CTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
++IHA ++K G AK+ ++++ F C P A +F +++ N+F W I+
Sbjct: 99 QQIHARILKNGDFFAKNEYVETKLVVFYAKCDFP----EVAVRLFHRLRVRNVFSWAAIV 154
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+ +A+L FI+M + + P P++ KA L L G +HG V+K G
Sbjct: 155 GLQCRMGFSEDALLGFIEMQ-ENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGF 213
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
F+ ++++ MY KCG ++++R++FD
Sbjct: 214 GACVFVSSSLVDMYG--------------------------------KCGVLEDARKVFD 241
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
MV +N V+WNSMI GYV+N +EA+++F +M+ + I+P+ T+ S L+A A L A+ +
Sbjct: 242 SMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIE 301
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ H + N +L+ I+ ++II+ Y K G E A VF+ + +K + WN ++
Sbjct: 302 GKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQ 361
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+ +A+ + ++S NL+ D ++ ++L+A + + K+ Y I+ +++
Sbjct: 362 HHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKE-----GHCYCIRRNLE 416
Query: 360 H----YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ ++D + +++A K+ S ++ D ++W +LL+A + G
Sbjct: 417 SDVVVANSIIDMYAKCERIDDARKVFDS-TTERDLVLWNTLLAAYAQVG 464
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 157/348 (45%), Gaps = 52/348 (14%)
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
Q+G G L G V ++ L Q IH I+ N F ++ + V+T+
Sbjct: 76 QIGPEIYGELLQGCVYERALHTGQQIHARIL---KNGDFFAKN----EYVETK------- 121
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
+++ AKC + + RLF ++ RN SW +++ R ++AL F EMQE + P
Sbjct: 122 -LVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFP 180
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
F + ++L AC L I G+ +H +++ F V ++++DMY KCG E A +VF
Sbjct: 181 DNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVF 240
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA-CNHSGKV 338
+++ +K + WNSM+ G NG EAI +F ++ ++P ++ + L+A N +
Sbjct: 241 DSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALI 300
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE-------------------- 378
+ + + + + + S +++ + GL+E+AE
Sbjct: 301 EGKQGHAIAILNSLDLDNILG--SSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISS 358
Query: 379 --------------KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
L+RS D++ S+LSA NI++ K+
Sbjct: 359 YVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEG 406
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 302/580 (52%), Gaps = 93/580 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYL--------VFTQ-IKKPN 51
++ ++++HA L+K GL +DP AS+++A +YA L VF+ + PN
Sbjct: 111 LRHVQELHAQLLKQGLHRDPHTASKLIA---------SYALLRRVPACRCVFSAAVALPN 161
Query: 52 LFIWNTII-------RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLA 104
++ R ++ +S P A+ +F+D+ + Q TY L KA A GL
Sbjct: 162 SPFPSSTTLLTKTLLRAYALNSLPHAALAVFLDVPLR---QRGTFTYSFLIKALAAAGLT 218
Query: 105 R-DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT------------ 151
GA H VVK G D F+ N +I Y+ LS+A+ +FDE+ T
Sbjct: 219 PVRGA--HAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAA 276
Query: 152 ------------------EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMI 193
E D V+WN+M+ G AK GE +++ LF +M RN VSW++++
Sbjct: 277 MVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVV 336
Query: 194 SGYVRN-------VKF------------------------KEALELFREMQEQNIKPSEF 222
S Y + V F +EA LF EM + I+
Sbjct: 337 SAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVI 396
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT- 281
+VS+L ACA+ G++ G+ IH + +T+V A++DM+CKCGC RA +F+T
Sbjct: 397 AVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTE 456
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+ +K L WN ++ G AM+G +A++LF+ ++ PD ++ I VL+AC H G V +
Sbjct: 457 IVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEG 516
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
+ +F M Y IKP I+HY CMVD LGR GL++EA +I+ MP +P+ +IWGSLLSACR
Sbjct: 517 RRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACR 576
Query: 402 KHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGC 461
H N+E A+ A ++ L + + Y ++SN+YA + ++ + + R+ MK +K G
Sbjct: 577 LHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGS 636
Query: 462 SLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
S IE++ HEF G R HP++ ++ +++ L ++ +G
Sbjct: 637 SWIELNEAFHEFTVGDRKHPESDQISDMIDRLSSHVKFVG 676
>gi|218201765|gb|EEC84192.1| hypothetical protein OsI_30581 [Oryza sativa Indica Group]
Length = 715
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/553 (31%), Positives = 291/553 (52%), Gaps = 70/553 (12%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPN-------------- 51
++H ++K+G P+ + +L F +S D++ A +F + N
Sbjct: 133 QVHCQVVKSGSDDFPVVGASLLDFYSS-CLDLDAARTLFDTLHANNELLWSPMVVALVRF 191
Query: 52 ------------------LFIWNTIIRGFSQSSTPR--NAILLFIDMLVTSPIQPQRLTY 91
LF W II G+++ + ++ LF+ +L + P TY
Sbjct: 192 NLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVMPNEFTY 251
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYAN---------------- 135
S+ +A ++G G +HG +++ G E +Q I + ++ +Y
Sbjct: 252 DSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMVYNGLQM 311
Query: 136 ----------CGFLS-----EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
GF+S +A+L+F ++ TE D ++N MI A G +++ RR+F+
Sbjct: 312 PSLITSNTLIAGFISMGRTEDAKLVFSQM-TEHDSGSYNLMIKAYADEGRLEDCRRMFEM 370
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M RN V+ NSM+S ++N K +E +LF +++ + + S F +LL+ACA +G I QG
Sbjct: 371 MPRRNMVTLNSMMSVLLQNGKLEEGRKLFEQIRMKGTRASTFP--ALLHACATIGTIEQG 428
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H L FE N V TA++DMY KCGC A F+ + ++ W S++ GLA N
Sbjct: 429 KMVHALLCKTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQN 488
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G+ EAI F+ + +N+KP+ I+F+ +L A +G VN+ +F M E+Y + P+++H
Sbjct: 489 GHWMEAIVQFARMLKNNVKPNEITFLGILMASARAGLVNKGMRFFHSM-ESYGVVPTVEH 547
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y+C VD LGRA + EAEK I MP D ++WG+LL+AC ++EM ++ A+++ +
Sbjct: 548 YTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYMG 607
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
YV MSN+YA ++E+ ++ R ++ + +KEPGCS IEV VH F+ R H
Sbjct: 608 TKHISAYVAMSNIYAKLGKWEDVVKVRTRLRSINAKKEPGCSWIEVKDMVHVFLVEDRNH 667
Query: 481 PKAPEVYLLLNDL 493
P+ E+YL+L DL
Sbjct: 668 PEREEIYLMLEDL 680
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 189/391 (48%), Gaps = 17/391 (4%)
Query: 43 VFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLG 102
VF +++ WN + ++ R+A+ M S TY S A A+
Sbjct: 68 VFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMH-RSAAGLDEATYASALGACARGR 126
Query: 103 LARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
R G Q+H +VVK G + + +++ Y++C L AR +FD + +++ W+ M+
Sbjct: 127 CLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELL-WSPMV 185
Query: 163 IGLAKCGEIDESRRLFDKMV-SRNTVSWNSMISGYVR--NVKFKEALELFREM-QEQNIK 218
+ L + + ++ L +M SR+ +W ++ISGY R N ++LELF ++ E +
Sbjct: 186 VALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGVM 245
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
P+EFT S+L AC K+GA+ G IH L+ + FE ++ +A++D+YC+ G + A+ V
Sbjct: 246 PNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLITSALVDLYCRSGAVDDAVMV 305
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
+N + L N+++ G G +A +FS + + D S+ ++ A G++
Sbjct: 306 YNGLQMPSLITSNTLIAGFISMGRTEDAKLVFSQMT----EHDSGSYNLMIKAYADEGRL 361
Query: 339 NQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP-SDPDAIIWGSLL 397
+ F +M + ++ + M+ L + G LEE KL + A + +LL
Sbjct: 362 EDCRRMFEMMP-----RRNMVTLNSMMSVLLQNGKLEEGRKLFEQIRMKGTRASTFPALL 416
Query: 398 SACRKHGNIEMAKQAAKQIIELDKNESCGYV 428
AC G IE K + + ES GYV
Sbjct: 417 HACATIGTIEQGKMVHALLCK-TPFESNGYV 446
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 123/273 (45%), Gaps = 48/273 (17%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+ IH LI++G + + S ++ +C S G ++ A +V+ ++ P+L NT+I GF
Sbjct: 268 RSIHGCLIQSGFESEQLITSALVDLYCRS--GAVDDAVMVYNGLQMPSLITSNTLIAGFI 325
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+A L+F M + +Y + KAYA G D ++ + ++ +
Sbjct: 326 SMGRTEDAKLVFSQM-----TEHDSGSYNLMIKAYADEGRLEDCRRMFEMMPRRNM---- 376
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEV---------------------------------- 149
N+++ + G L E R +F+++
Sbjct: 377 VTLNSMMSVLLQNGKLEEGRKLFEQIRMKGTRASTFPALLHACATIGTIEQGKMVHALLC 436
Query: 150 DTEFDVVAW--NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
T F+ + +++ +KCG + ++R F ++S N SW S+I+G +N + EA+
Sbjct: 437 KTPFESNGYVGTALVDMYSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQNGHWMEAIV 496
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
F M + N+KP+E T + +L A A+ G + +G
Sbjct: 497 QFARMLKNNVKPNEITFLGILMASARAGLVNKG 529
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 130/305 (42%), Gaps = 42/305 (13%)
Query: 174 SRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAK 233
+R +FD M R +SWN+ ++ + R + ++AL M E T S L ACA+
Sbjct: 65 ARGVFDGMRRRAALSWNATVAAHARRGRVRDALGTAARMHRSAAGLDEATYASALGACAR 124
Query: 234 LGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV----------- 282
+R G +H +V + + +V +++D Y C + A +F+T+
Sbjct: 125 GRCLRMGWQVHCQVVKSGSDDFPVVGASLLDFYSSCLDLDAARTLFDTLHANNELLWSPM 184
Query: 283 ---------------------PKKGLSCWNSMVFGLA--MNGYENEAIKLFSGLQSSN-L 318
P + L W +++ G A N Y ++++LF L + + +
Sbjct: 185 VVALVRFNLLSDALDLLQRMPPSRDLFAWTAIISGYARGANEYCCKSLELFVQLLAEDGV 244
Query: 319 KPDYISFIAVLTACNHSGKVNQAKD-YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEA 377
P+ ++ +VL AC G + + + L+ ++ + I S +VD R+G +++A
Sbjct: 245 MPNEFTYDSVLRACVKMGALEFGRSIHGCLIQSGFESEQLIT--SALVDLYCRSGAVDDA 302
Query: 378 EKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
+ + P I +L++ G E AK Q+ E D S Y LM YA
Sbjct: 303 VMVYNGLQM-PSLITSNTLIAGFISMGRTEDAKLVFSQMTEHD---SGSYNLMIKAYADE 358
Query: 438 YQFEE 442
+ E+
Sbjct: 359 GRLED 363
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +HA L KT + + ++ S G ++ A F+ I PN+ W ++I G +Q
Sbjct: 429 KMVHALLCKTPFESNGYVGTALVDM-YSKCGCVSDARAAFSCIMSPNVASWTSLINGLAQ 487
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ AI+ F ML + ++P +T+ + A A+ GL G + + G+
Sbjct: 488 NGHWMEAIVQFARMLKNN-VKPNEITFLGILMASARAGLVNKGMRFFHSMESYGVVPTVE 546
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK---M 181
+ + + + EA ++ D V W +++ +++ ++ +K M
Sbjct: 547 HYTCAVDLLGRARRVREAEKFISKMPIPADGVVWGALLTACWYTMDLEMGEKVAEKLFYM 606
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
+++ ++ +M + Y + K+++ +++ ++ N K
Sbjct: 607 GTKHISAYVAMSNIYAKLGKWEDVVKVRTRLRSINAK 643
>gi|242045040|ref|XP_002460391.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
gi|241923768|gb|EER96912.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
Length = 573
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 259/438 (59%), Gaps = 6/438 (1%)
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQFIH 126
P A+ LF D L+ S P Y + A+ AQLH K+G L + +
Sbjct: 59 PHLALRLF-DHLLRSGADPDPAAYELALASCARGKDRATAAQLHAHAAKRGFLASHRRVR 117
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK-CGEIDESRRLFDKMVSRN 185
+++ YA CG L AR +FD T+ D+VAWN ++ G A+ G+ D R F +M SR+
Sbjct: 118 CRLVHAYAVCGMLPHARRVFDG-GTDNDMVAWNCLLRGYAQEGGDADLLRDFFARMPSRD 176
Query: 186 TVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+VSWN+++S V N ++ EA+ +FREM Q +P T+VS+++A A LGA+ QG W H
Sbjct: 177 SVSWNTVLSLCVVNGEYDEAIAVFREMLASQECQPDRVTLVSVVSAIAYLGALAQGLWAH 236
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYE 303
+++ E+ + +A+I+MY KCG E A+ VF+ V K+ L WN+M+ G NG
Sbjct: 237 AYVIRKGVEVEEKLSSALINMYSKCGFLEGAVYVFDNVRGKRSLDTWNAMLAGFTANGCS 296
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
A+ LF+ ++++ L P+ I+F +L AC+H G V + F M+ Y I+P I HY C
Sbjct: 297 GRALALFTRMETTGLMPNKITFNCILNACSHGGLVEEGMRCFQRMSRVYGIEPDIAHYGC 356
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD RAG+ E+AE++I+ MP +PDA + +LL ACR H N+E+ K+A ++IE N+
Sbjct: 357 MVDLFCRAGMFEKAEEIIQIMPMEPDASMLKALLGACRTHKNLELGKKAGHRLIEAAPND 416
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
GYVL+SN+YA + + R LM + + K PG S +E++G +HEF++G + H +
Sbjct: 417 HAGYVLLSNIYALDGNWGRVHKVRKLMLDRGVLKTPGSSSVELNGVIHEFISGDKSHSRK 476
Query: 484 PEVYLLLNDLGLLIQEMG 501
++Y +L+++ ++ G
Sbjct: 477 RDIYKMLDEICQQLKSAG 494
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIK-KPNLFIWNTIIRGFSQSS 66
HA++I+ G+ + +S ++ S G + A VF ++ K +L WN ++ GF+ +
Sbjct: 236 HAYVIRKGVEVEEKLSSALINM-YSKCGFLEGAVYVFDNVRGKRSLDTWNAMLAGFTANG 294
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QGLEFDQFI 125
A+ LF M T + P ++T+ + A + GL +G + R+ + G+E D
Sbjct: 295 CSGRALALFTRMETTG-LMPNKITFNCILNACSHGGLVEEGMRCFQRMSRVYGIEPDIAH 353
Query: 126 HNTIIYMYANCGFLSEA 142
+ ++ ++ G +A
Sbjct: 354 YGCMVDLFCRAGMFEKA 370
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/409 (38%), Positives = 251/409 (61%), Gaps = 5/409 (1%)
Query: 89 LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDE 148
T P + K+ A L G +HG+ ++ GLE D ++ ++I MY CG + +AR +FD+
Sbjct: 108 FTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDK 167
Query: 149 VDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
+ D+ +WN++I G K GEI + LF++M RN VSW +MISGY +N ++AL L
Sbjct: 168 MIVR-DMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGL 226
Query: 209 FREMQEQN--IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
F EM + +KP+ T+VS+L ACA+ A+ +G IH+F LN+ V TA+ MY
Sbjct: 227 FDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMY 286
Query: 267 CKCGCPERALQVFNTVPKKG--LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
KC A F+ + + G L WN+M+ A +G EA+ +F + + ++PD ++
Sbjct: 287 AKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVT 346
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
F+ +L+ C+HSG ++ ++F M + ++P ++HY+C+VD LGRAG L EA++LI M
Sbjct: 347 FMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQM 406
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAM 444
P +WG+LL+ACR H N+E+A+ AA+++ L+ + S YVL+SNLYA + +EE
Sbjct: 407 PMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVK 466
Query: 445 EERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+ R L+K ++K PGCS IE++G+ H F+ + HP+A E+Y L L
Sbjct: 467 KLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEAL 515
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 121/293 (41%), Gaps = 41/293 (13%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVT-SPIQPQRLTYPS 93
G+I A +F +++ N+ W +I G++Q+ A+ LF +ML S ++P +T S
Sbjct: 187 GEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVS 246
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV-DTE 152
+ A AQ G ++H GL + + + MYA C L EAR FD +
Sbjct: 247 VLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNG 306
Query: 153 FDVVAWNSMIIGLAK--CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
+++AWN+MI A CG EA+ +F
Sbjct: 307 KNLIAWNTMITAYASHGCG---------------------------------VEAVSIFE 333
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
M ++P T + LL+ C+ G I G ++ + E ++D+ +
Sbjct: 334 NMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRA 393
Query: 270 GCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
G A ++ + +P + G S W +++ A + N I + + L+PD
Sbjct: 394 GRLVEAKELISQMPMQAGPSVWGALL--AACRSHRNLEIAELAARRLFVLEPD 444
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 206 LELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
LE + M + FT+ +L +CA L + G +H + E + V ++IDM
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y KCG A ++F+ + + ++ WN+++ G G A LF ++ N+ +S+
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNI----VSW 207
Query: 326 IAVLTACNHSGKVNQAKDYFT-LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
A+++ +G QA F ++ + ++KP+ ++ A ++ LE ++
Sbjct: 208 TAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRI 263
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 302/580 (52%), Gaps = 93/580 (16%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYL--------VFTQ-IKKPN 51
++ ++++HA L+K GL +DP AS+++A +YA L VF+ + PN
Sbjct: 39 LRHVQELHAQLLKQGLHRDPHTASKLIA---------SYALLRRVPACRCVFSAAVALPN 89
Query: 52 LFIWNTII-------RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLA 104
++ R ++ +S P A+ +F+D+ + Q TY L KA A GL
Sbjct: 90 SPFPSSTTLLTKTLLRAYALNSLPHAALAVFLDVPLR---QRGTFTYSFLIKALAAAGLT 146
Query: 105 R-DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT------------ 151
GA H VVK G D F+ N +I Y+ LS+A+ +FDE+ T
Sbjct: 147 PVRGA--HAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAA 204
Query: 152 ------------------EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMI 193
E D V+WN+M+ G AK GE +++ LF +M RN VSW++++
Sbjct: 205 MVRQGEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVV 264
Query: 194 SGYVRN-------VKF------------------------KEALELFREMQEQNIKPSEF 222
S Y + V F +EA LF EM + I+
Sbjct: 265 SAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVI 324
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT- 281
+VS+L ACA+ G++ G+ IH + +T+V A++DM+CKCGC RA +F+T
Sbjct: 325 AVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTE 384
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+ +K L WN ++ G AM+G +A++LF+ ++ PD ++ I VL+AC H G V +
Sbjct: 385 IVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEG 444
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
+ +F M Y IKP I+HY CMVD LGR GL++EA +I+ MP +P+ +IWGSLLSACR
Sbjct: 445 RRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACR 504
Query: 402 KHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGC 461
H N+E A+ A ++ L + + Y ++SN+YA + ++ + + R+ MK +K G
Sbjct: 505 LHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGS 564
Query: 462 SLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
S IE++ HEF G R HP++ ++ +++ L ++ +G
Sbjct: 565 SWIELNEAFHEFTVGDRKHPESDQISDMIDRLSSHVKFVG 604
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 266/482 (55%), Gaps = 35/482 (7%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++HAH++K GL P+ + ++ + + ++ VF + K + W+++I F+Q+
Sbjct: 46 QLHAHILKFGLQTIPLVSHNLINLYSKTQLPL-FSLQVFDETPKKSSTTWSSVISAFAQN 104
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
P A+ F ML ++P YPS KA L + G +H VK G D F+
Sbjct: 105 EAPLLALQFFRRML-NDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
++++ MYA KCGEI ++R LFD+M RN
Sbjct: 164 GSSLVDMYA--------------------------------KCGEIGDARHLFDEMPERN 191
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSW+ MI GY + EAL LF++ +++ ++FT S++ C+ + G+ IH
Sbjct: 192 VVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHG 251
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+ F+ ++ V +A+I +Y KCG E A QVF+ +P + L WNSM+ A + +
Sbjct: 252 LCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQR 311
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
LF + + +KP++I F++VL AC+H+G V + ++YF+LM + Y I+P +HY+ +V
Sbjct: 312 VFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRD-YGIEPETEHYASLV 370
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAG L+EA +I+ MP P +WG+LL+ CR H + EMA A +I+E+D + S
Sbjct: 371 DLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSG 430
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
+VL+SN YAA+ ++EEA R ++++ ++KE G S +E +VH F AG R H K E
Sbjct: 431 LHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVE 490
Query: 486 VY 487
+Y
Sbjct: 491 IY 492
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 8/185 (4%)
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
EQN + + +LL + + ++RQG +H ++ + +V +I++Y K P
Sbjct: 22 EQNYR----QICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPL 77
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+LQVF+ PKK + W+S++ A N A++ F + + ++PD + + AC
Sbjct: 78 FSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACG 137
Query: 334 HSGKVNQAKDYFTLMTET-YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+ + K L +T Y + S +VD + G + +A L MP + + +
Sbjct: 138 FLRRSDVGKSVHCLAVKTGYYCDVFVG--SSLVDMYAKCGEIGDARHLFDEMP-ERNVVS 194
Query: 393 WGSLL 397
W ++
Sbjct: 195 WSGMI 199
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 103/245 (42%), Gaps = 16/245 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K IH +K S +++ S G I AY VF +I NL +WN+++ +Q
Sbjct: 247 KLIHGLCLKMSFDSSSFVGSALISL-YSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQ 305
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ + LF +M ++P + + S+ A + GL G + + G+E +
Sbjct: 306 HAHTQRVFGLFEEM-GNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETE 364
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ +++ + G L EA + ++ W +++ G + + + + D+++
Sbjct: 365 HYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEM 424
Query: 185 NTVSWNSMI---SGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ S + + Y +++EA + + ++++ +K L + +G
Sbjct: 425 DSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKKE-----------TGLSWVEEGN 473
Query: 242 WIHNF 246
+H F
Sbjct: 474 KVHTF 478
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/557 (31%), Positives = 296/557 (53%), Gaps = 71/557 (12%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
K+H +LIK G DP +A+ +L + +G A VF +I KP++ WN +I G
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDM-YAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLH 267
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
A+ L M + + P T S KA A +GL + G QLH ++K +E D F+
Sbjct: 268 EKNDLALKLLGKM-GSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFV 326
Query: 126 H-------------------------------NTIIYMYANCGFLSEARLMF-------- 146
N+II Y+NCG+ EA +F
Sbjct: 327 GVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGL 386
Query: 147 -----------------------DEVDT-------EFDVVAWNSMIIGLAKCGEIDESRR 176
++V T ++D NS++ KC ++++ +
Sbjct: 387 EFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAK 446
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+ + + V++ SMI+ Y + +EAL+++ MQ+++IKP F SL NACA L A
Sbjct: 447 VFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSA 506
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
QG+ IH ++ + ++++MY KCG + A +FN + +G+ W++M+ G
Sbjct: 507 YEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGG 566
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA +G+ +A++LF + + + P++I+ ++VL+ACNH+G V +A+ +F LM + + I P
Sbjct: 567 LAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITP 626
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ +HY+CMVD LGR G L+EA L++ MP A +WG+LL A R H NIE+ + AA+ +
Sbjct: 627 TQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEML 686
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+ L+ +S ++L++N+YA++ ++ + R MK ++KEPG S IE+ +V+ F+ G
Sbjct: 687 LTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVG 746
Query: 477 GRLHPKAPEVYLLLNDL 493
R HP++ E+Y+ L+DL
Sbjct: 747 DRSHPRSKEIYVKLDDL 763
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 202/403 (50%), Gaps = 27/403 (6%)
Query: 49 KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA 108
+P+L W+ +I G+ Q+ A+L + +M + + T+ S+ K + G
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGA-KGNEFTFSSVLKGCSLTRNLELGK 168
Query: 109 QLH-----GRVVKQGLEFDQFIHNTIIYMYA-----NCGFLSEARLMFDEVDTEFDVVAW 158
Q+H ++ G+ ++F +T++ A N G L+ ++ + D +
Sbjct: 169 QIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLI--KLGYDSDPFSA 226
Query: 159 NSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
N+++ AK G + + +F ++ + VSWN++I+G V + K AL+L +M +
Sbjct: 227 NALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVA 286
Query: 219 PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQV 278
PS FT+ S L ACA +G ++ G +H+ L+ E ++ V +IDMY KCG + A V
Sbjct: 287 PSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMV 346
Query: 279 FNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
F+ +P K + WNS++ G + GY+ EA+ LF+ + L+ + + +L + S
Sbjct: 347 FDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGS--- 403
Query: 339 NQAKDYFTLMTETYKIKPSIKH----YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWG 394
QA F T IK ++ + ++D+ G+ LLE+A K+ P++ D + +
Sbjct: 404 -QANG-FCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAE-DLVAYT 460
Query: 395 SLLSACRKHGNIEMAKQAAKQIIEL-DKNESCGYVLMSNLYAA 436
S+++A ++G + ++A K + + D++ + S+L+ A
Sbjct: 461 SMITAYSQYG---LGEEALKMYLRMQDRDIKPDAFIFSSLFNA 500
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 183/376 (48%), Gaps = 25/376 (6%)
Query: 37 INYAYL--VFTQIKKP-NLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
+N+ +L + T ++KP FI NT ++ + + P + +D ++YP
Sbjct: 1 MNFPHLHSLRTVLRKPLKPFIVNTSVK-YISNLRPNDVSGFILDSSSNP----SSISYPK 55
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEAR-LMFDEVDTE 152
L + G +H R+++ GL + N ++ +Y+ C AR L+ D +E
Sbjct: 56 LLLQFTASKDVSSGMAIHARIIRLGLLGLR---NRLVNLYSKCQCFRVARKLVIDS--SE 110
Query: 153 FDVVAWNSMIIGLAKCGEIDESRRLFDKM----VSRNTVSWNSMISG--YVRNVKFKEAL 206
D+V+W+++I G + G +E+ + +M N +++S++ G RN++ + +
Sbjct: 111 PDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQI 170
Query: 207 E---LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
L EM I P+EF++ ++LNACA L G +H +L+ ++ + A++
Sbjct: 171 HRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALL 230
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY K GCPE A+ VF +PK + WN+++ G ++ + A+KL + S + P
Sbjct: 231 DMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMF 290
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+ + L AC G V + + + + ++P ++D + GLL++A +
Sbjct: 291 TLSSALKACAAIGLVKLGRQLHSALMKM-DMEPDSFVGVGLIDMYSKCGLLQDARMVFDL 349
Query: 384 MPSDPDAIIWGSLLSA 399
MP D I+W S++S
Sbjct: 350 MPXK-DVIVWNSIISG 364
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH H++K GL D A + ++ + G I+ A +F +I + W+ +I G +Q
Sbjct: 511 KQIHVHVLKCGLLSDVFAGNSLVNM-YAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQ 569
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQ 123
R A+ LF ML + I P +T S+ A GL + + G + K G+ Q
Sbjct: 570 HGHGRKALQLFYQML-KNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQ 628
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
+ ++ + G L EA ++ E+ + W +++
Sbjct: 629 EHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALL 667
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 269/496 (54%), Gaps = 35/496 (7%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+HA K GLA+ + +++ + GD+ A +F +++ P+L +N +I G+S +
Sbjct: 243 VHAFGEKCGLAQHEHVVTGLISL-YAKCGDMECARHLFDRMEGPDLVTYNALISGYSING 301
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
+++ LF + LV ++P T +L ++ G LH VVK GL+ + +
Sbjct: 302 MVGSSVELFKE-LVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVS 360
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+ +Y C F ++D +RR FD M +
Sbjct: 361 TALTTLY--CRF------------------------------NDMDSARRAFDAMPEKTM 388
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
SWN+MISGY +N + A+ LF++MQ N++P+ T+ S L+ACA+LGA+ G+W+H
Sbjct: 389 ESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKI 448
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ ELN V+TA+IDMY KCG A +F+++ K + WN M+ G ++G EA
Sbjct: 449 IANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEA 508
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+KL+ + ++L P +F++VL AC+H G V + F MT Y I P I+H +CMVD
Sbjct: 509 LKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVD 568
Query: 367 ALGRAGLLEEAEKLIRSMP-SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
LGRAG L+EA +LI P S IWG+LL AC H + ++AK A++++ EL+ +
Sbjct: 569 LLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTG 628
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL+SNLY + Q+ EA R K K+ K PGC+LIE+ H F+AG R HP++
Sbjct: 629 YYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDA 688
Query: 486 VYLLLNDLGLLIQEMG 501
+YL L L + E G
Sbjct: 689 IYLYLEKLTAKMIEAG 704
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 201/437 (45%), Gaps = 44/437 (10%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRI--LAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
L+ +HA + +G A D AS + L F S D A VF + P+ +WNT++ G
Sbjct: 142 LRPLHALAVASGFAADNFVASALAKLYFTLSRGND---ARKVFDAVPSPDTVLWNTLLAG 198
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
S S A+ F+ M ++P T S+ A A++ G +H K GL
Sbjct: 199 LSGS----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQ 254
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ + +I +YA CG + AR +FD ++ D+V +N++I
Sbjct: 255 HEHVVTGLISLYAKCGDMECARHLFDRMEGP-DLVTYNALI------------------- 294
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
SGY N ++ELF+E+ ++PS T+V+L+ + G
Sbjct: 295 ------------SGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAG 342
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
+H +V + N V TA+ +YC+ + A + F+ +P+K + WN+M+ G A NG
Sbjct: 343 CLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNG 402
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
A+ LF +Q+ N++P+ ++ + L+AC G ++ K + + K++ ++
Sbjct: 403 LTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGK-WVHKIIANEKLELNVYVM 461
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+ ++D + G + EA + SM + + + W ++S HG A + K +++
Sbjct: 462 TALIDMYVKCGSIAEARCIFDSM-DNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHL 520
Query: 422 NESCGYVLMSNLYAASY 438
+ + +S LYA S+
Sbjct: 521 HPTSS-TFLSVLYACSH 536
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 185/453 (40%), Gaps = 92/453 (20%)
Query: 22 AASRILAFCT--SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDML 79
A+S +L + + SP + Y F +P+ F+ N+++R L D+L
Sbjct: 60 ASSLLLRYASLRSPPAHLLRLYRAF---PRPDRFLRNSLLRSLPT---------LRADLL 107
Query: 80 VTSPIQPQ-RLTYPSLFKAYAQLGLARDGAQ------LHGRVVKQGLEFDQFIHNTIIYM 132
SP SL + ++ G++ A LH V G D F+ + + +
Sbjct: 108 FPSPDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKL 167
Query: 133 YANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
Y F + N ++R++FD + S +TV WN++
Sbjct: 168 Y-------------------FTLSRGN-------------DARKVFDAVPSPDTVLWNTL 195
Query: 193 ISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
++G + EALE F M +++P T+ S+L A A++ G +H F
Sbjct: 196 LAG----LSGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCG 251
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
+ VVT +I +Y KCG E A +F+ + L +N+++ G ++NG +++LF
Sbjct: 252 LAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFK 311
Query: 312 GLQSSNLKPDYISFIAV-----------LTACNHSGKVNQAKD----YFTLMTETY---- 352
L L+P + +A+ L C H+ V D T +T Y
Sbjct: 312 ELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFN 371
Query: 353 -----------KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLLS 398
+ +++ ++ M+ + GL E A L + M + P+ + S LS
Sbjct: 372 DMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALS 431
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNESCGYVLMS 431
AC + G + + K K II +K E YV+ +
Sbjct: 432 ACAQLGALSLGKWVHK-IIANEKLELNVYVMTA 463
>gi|222617104|gb|EEE53236.1| hypothetical protein OsJ_36137 [Oryza sativa Japonica Group]
Length = 542
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 281/518 (54%), Gaps = 37/518 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQI--KKPNLFIWNTIIRGF 62
+++HAHL+ GL AA ++A +SP +A VF + N+++W I +
Sbjct: 28 RQLHAHLLIRGLPLPARAAVALVASSSSP----RHARAVFDSVPAASANVYLWTATISAY 83
Query: 63 SQS---------STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGR 113
++ A+ LF ML + P +P T S+ K + G A + GR
Sbjct: 84 ARHASSSSSHALEVAGEAVALFALMLWSGP-RPNAFTVTSVIKCCLE-GRAGLLLRARGR 141
Query: 114 VV-------------KQGLE----FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
V K+G++ + + NT++ G + AR +FD + E D +
Sbjct: 142 CVARSVREYWPGGRCKEGVDEMPVKNVVVGNTMVACNVRAGDMGAAREVFDGM-AERDPI 200
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WN+++ G G+ R LFD+M RN SWN+MI+ + +++F M+
Sbjct: 201 SWNTLMSGYLHLGDTATVRELFDEMTVRNVNSWNTMIAACSEEGSLADTVKVFNRMRATG 260
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+P TM L++ACA+LG++ +H L +C E+N V ++IDMY KCGC +A
Sbjct: 261 FEPDAATMAVLMSACAQLGSLTIAGQVHGLLQKSCVEMNCHVQNSLIDMYAKCGCISQAQ 320
Query: 277 QVFN-TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHS 335
+F T PK +S +N M+ A +G+ +A+ LF+ + S L+PD ++F+ VL+AC H+
Sbjct: 321 FLFTETYPKDTVS-YNVMIIAFAQHGHARDALDLFNAMVDSGLQPDAVTFLGVLSACAHA 379
Query: 336 GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGS 395
G V K+YF LM TY ++ S HY+C+VD GRAGL+EEA +++MP P A +WG+
Sbjct: 380 GLVEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRAGLIEEAHCFVKTMPVKPHAGVWGA 439
Query: 396 LLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKI 455
LL+ACRKH ++++ + AAK++I ++ YVL+ N A Q++ + +L M+ I
Sbjct: 440 LLNACRKHCHVDVGEIAAKELIRIEPKNPGNYVLLRNTLARGQQWDAVEDVQLSMRRKVI 499
Query: 456 EKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+K GCS +EVD VHEF+AG HPK E+Y +L L
Sbjct: 500 DKTAGCSWVEVDSVVHEFLAGDFYHPKFDEIYTILEHL 537
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 269/497 (54%), Gaps = 37/497 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA +K GL D + S G +N AY VF ++ NL WN I
Sbjct: 128 KQLHALAVKEGLINDVFVGCSVFDM-YSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVL 186
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA-QLGLARDGAQLHGRVVKQGLEFDQ 123
P ++++ FI++L +P +T+ A + +LGL G QLHG +++ G +
Sbjct: 187 HGRPEDSVIAFIELLRVGG-KPDSITFCXFLNACSDKLGLG-PGCQLHGFIIRSGYGQNV 244
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ N +I Y KCGE++ S +FD+M
Sbjct: 245 SVSNGLIDFYG--------------------------------KCGEVECSEMVFDRMGE 272
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
RN+VSW+S+I+ YV+N + ++A LF ++++I+P++F + S+L ACA L I G +
Sbjct: 273 RNSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSV 332
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
V C E N V +A++DMY KCG + A Q FN +P++ L WN+++ G A G+
Sbjct: 333 QALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHA 392
Query: 304 NEAIKLFSGLQSS-NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
N+A+ L + S+ + P Y+S I L+AC+ +G + F M E Y ++P +HY+
Sbjct: 393 NKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYA 452
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C+VD LGRAG++E A I+ MP P IWG+LL ACR HG E+ K AA+++ ELD
Sbjct: 453 CLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLAAEKLFELDPK 512
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+S +V++SN++AA+ ++EE R MKEV I+K G S I VD +H F A + H K
Sbjct: 513 DSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHMFQAKDKSHEK 572
Query: 483 APEVYLLLNDLGLLIQE 499
PE+ +L L +Q+
Sbjct: 573 DPEIQDILGKLRKEMQD 589
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 130/273 (47%), Gaps = 8/273 (2%)
Query: 151 TEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
T F +N ++ AK ++ ++ + + R+ V+W ++I+G V+N F AL F
Sbjct: 38 TPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGSVQNGCFVSALLHFS 97
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M ++P++FT +L A L G+ +H V + V ++ DMY K G
Sbjct: 98 DMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLG 157
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
A +VF+ +P + L WN+ + ++G +++ F L KPD I+F L
Sbjct: 158 FLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLN 217
Query: 331 ACNHS-GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
AC+ G + + ++ Y S+ + ++D G+ G +E +E + M + +
Sbjct: 218 ACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNG--LIDFYGKCGEVECSEMVFDRM-GERN 274
Query: 390 AIIWGSLLSACRKHGNIEMAK----QAAKQIIE 418
++ W SL++A ++ E A +A K+ IE
Sbjct: 275 SVSWSSLIAAYVQNNEEEKASCLFLRARKEDIE 307
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 261/457 (57%), Gaps = 38/457 (8%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
+N A+ +F Q+ + N+ W T+I +S+ + A+ L + ML ++P TY S+ +
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML-RDGVRPNVYTYSSVLR 122
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A + R LH ++K+GLE D ++ + +I ++A
Sbjct: 123 ACNGMSDVR---MLHCGIIKEGLESDVYVRSALIDVFA---------------------- 157
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
K GE +++ +FD+MV+ + + WNS+I G+ +N + ALELF+ M+
Sbjct: 158 ----------KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG 207
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+ T+ S+L AC L + G H +V ++ + I+ A++DMYCKCG E A
Sbjct: 208 FIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDAR 265
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
+VFN + ++ + W++M+ GLA NGY EA+KLF ++SS KP+YI+ + VL AC+H+G
Sbjct: 266 RVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAG 325
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
+ YF M + Y I P +HY CM+D LG+AG L++A KL+ M +PDA+ W +L
Sbjct: 326 LLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTL 385
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
L ACR N+ +A+ AAK++I LD ++ Y ++SN+YA S +++ E R M+++ I+
Sbjct: 386 LGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIK 445
Query: 457 KEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
KEPGCS IEV+ ++H F+ G HP+ EV LN L
Sbjct: 446 KEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQL 482
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 39/282 (13%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M D++ +H +IK GL D S ++ + G+ A VF ++ + +WN+II
Sbjct: 127 MSDVRMLHCGIIKEGLESDVYVRSALIDV-FAKLGEPEDALSVFDEMVTGDAIVWNSIIG 185
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
GF+Q+S A+ LF M I Q T S+ +A L L G Q H +VK +
Sbjct: 186 GFAQNSRSDVALELFKRMKRAGFIAEQA-TLTSVLRACTGLALLELGMQAHVHIVK--YD 242
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D ++N ++ MY CG L +AR +F+++ E DV+ W++MI GLA+
Sbjct: 243 QDLILNNALVDMYCKCGSLEDARRVFNQM-KERDVITWSTMISGLAQ------------- 288
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+GY +EAL+LF M+ KP+ T+V +L AC+ G + G
Sbjct: 289 -------------NGYS-----QEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDG 330
Query: 241 EWIHNFLVTNCFELNTIV--VTAIIDMYCKCGCPERALQVFN 280
W + + + +N +ID+ K G + A+++ N
Sbjct: 331 -WYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLN 371
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
+Q + T L+ C A+ +G I L N + +V +I+MY K
Sbjct: 4 LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
A Q+F+ +P++ + W +M+ + +A++L + ++P+ ++ +VL A
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
CN V + ++ E + ++ S ++D + G E+A + M + DAI
Sbjct: 124 CNGMSDVRML--HCGIIKEGLESDVYVR--SALIDVFAKLGEPEDALSVFDEMVT-GDAI 178
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQI 416
+W S++ ++ ++A + K++
Sbjct: 179 VWNSIIGGFAQNSRSDVALELFKRM 203
>gi|357118276|ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 508
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/496 (34%), Positives = 282/496 (56%), Gaps = 34/496 (6%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSP-AGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK+IH +L+ G+ +L C + G ++YA VF I P+LF+ N ++R
Sbjct: 11 RSLKQIHGNLVVKGITSRLQPLRELLLACVASFNGGMDYARKVFDGISHPDLFMHNVMVR 70
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G++ S+ P A +L+ + + ++P T+ L +A A L + G Q+HG VVK G
Sbjct: 71 GYAHSAAPAAAFVLY-RRIEAARLKPDSFTFCYLLRACAGLPGSCAGYQVHGAVVKLGYF 129
Query: 121 FDQFIHNTIIYMYANCG-------FLSEA------------------------RLMFDEV 149
D F+ N +I M+A CG L EA R +FDE
Sbjct: 130 KDAFVRNALINMHAKCGDLLVAGTLLDEAGERDVVARSAVIAGHAAKGELDIARQLFDEC 189
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
+ D+V WN M+ AK GE++++R L D+ ++ VSWN++I+GY KEALE+
Sbjct: 190 QHK-DLVCWNVMVAAYAKYGEMEKARGLLDRAPEKDVVSWNTIITGYTAKGLLKEALEVL 248
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
EM+ + P E T+VSLL+ CA LG++ G IH+ + ++ + A++ MY KC
Sbjct: 249 DEMRCVGLMPDEATIVSLLSCCANLGSLGTGRMIHSLHLEGRPCISILPGNALVSMYAKC 308
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G + A++VF+ + ++ + WNS++ GLA +G ++++ F+ + L P+ ISF+ VL
Sbjct: 309 GDVQAAMEVFSRMKERDVWTWNSIIGGLAFHGQAEQSVQFFNKMLDEGLCPNEISFLCVL 368
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
AC+H+G V + YF+LM Y+I+P+ +HYSC+VD LGR+GLL+EA ++ SM +P
Sbjct: 369 GACSHAGLVEDGQRYFSLMINRYRIEPNARHYSCIVDMLGRSGLLDEAFAIVSSMRCEPA 428
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
+IW +LL ACR HG++ + K A +++++++++ S YVL+S +YA+ ++ R
Sbjct: 429 VVIWRTLLGACRIHGDVALGKLARERLLKMNEDASGDYVLLSGIYASCDEWFGVETVRGS 488
Query: 450 MKEVKIEKEPGCSLIE 465
M E I K G + +E
Sbjct: 489 MDERGIRKVAGYAQVE 504
>gi|255575746|ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531775|gb|EEF33594.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/506 (33%), Positives = 273/506 (53%), Gaps = 37/506 (7%)
Query: 24 SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSP 83
S + +C AG++ Y +F + K N+ W +I GF+ + +A+LLF++M +
Sbjct: 170 SMVSGYCR--AGEVEEGYHLFRTMPKRNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGAD 227
Query: 84 IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF---IHNTIIYMYANCGFLS 140
I P T+ SL A A LG R G QLH R++ +GL+ D + + +I MY++ GF+
Sbjct: 228 ITPNIETFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYDGRLSKGLICMYSSIGFMD 287
Query: 141 EARLMF-------------------------DEVDTEFDV------VAWNSMIIGLAKCG 169
A +F D+ FD + W SMI G G
Sbjct: 288 YAHYIFNKNSNYYVVQSCNYMINGYIRIGLLDKAQNLFDTMPVRDKITWTSMIDGYLVIG 347
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
+ E+ LF M ++ V+W +MISG+VRN F EA LF EM Q ++P T L
Sbjct: 348 NVSEACSLFLYMPEKDAVAWTTMISGHVRNELFAEATYLFSEMLTQGVRPLSSTYAILFG 407
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
A + ++ QG +H L + + I+ ++I MY KCG A ++F+ + L
Sbjct: 408 AAGAVASLDQGRQLHAMLTKTLSDNDLILENSLISMYAKCGEIRNAYRIFSQMISHDLIS 467
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WNSM+ G + +G NEA+++F + S P+ ++F+ VL+AC+H+G +NQ + F M+
Sbjct: 468 WNSMIMGFSHHGLANEALEVFEAMVDSGTHPNSVTFLGVLSACSHAGLINQGWEIFNAMS 527
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR-KHGNIEM 408
+ + ++P ++HY CMV+ LGRAG L+EAE+LI +P + + IWG+LL C N ++
Sbjct: 528 DVFAVQPGLEHYICMVNLLGRAGKLKEAEELILGLPLERNHAIWGALLGVCSFSEKNADI 587
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDG 468
AK+AA +I+ELD + +VL+ N+YAAS Q E + R M ++K PGCS I ++G
Sbjct: 588 AKRAATRILELDPLNAPAHVLLCNIYAASGQHIEEHKLRKEMGLKGVKKVPGCSWIVLNG 647
Query: 469 EVHEFVAGGRLHPKAPEVYLLLNDLG 494
VH F++G + +A ++ LL G
Sbjct: 648 RVHVFLSGDKPRLQAKDMLSLLFQFG 673
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 205/465 (44%), Gaps = 94/465 (20%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYPSLFKAYAQLGLARDGAQLHG 112
W +++ +S+S A LF I P+R ++Y +L Q G + +L
Sbjct: 13 WTSLLSKYSRSGFVDEARALF-------DIMPERNAVSYNALLSGLLQCGRLSEAMKL-- 63
Query: 113 RVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEID 172
++ E + +++ A+ G + EA+ +F+E+ + +VV+WN+MI+GL + G+++
Sbjct: 64 --FEEMPERNVVSWTSMLCGLADAGKICEAKSLFEEM-PDRNVVSWNAMIVGLIRNGDLE 120
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
+R +FD+ +N SWN MI+GY N + +EA LF EM+++N+
Sbjct: 121 AARMVFDESPVKNAASWNGMIAGYAENGRMEEARALFDEMEDRNV--------------- 165
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
I T+++ YC+ G E +F T+PK+ + W +
Sbjct: 166 ------------------------ITWTSMVSGYCRAGEVEEGYHLFRTMPKRNIVSWTA 201
Query: 293 MVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYISFIAVLTAC-----NHSGKVNQAK---- 342
M+ G NG+ +A+ LF ++ +++ P+ +FI++ AC + GK A+
Sbjct: 202 MIGGFTWNGFYEDALLLFLEMKRGADITPNIETFISLAYACAGLGFHRLGKQLHARLITE 261
Query: 343 -----DYFTLMTET---------------YKIKPSIKHY---SC--MVDALGRAGLLEEA 377
DY +++ Y + +Y SC M++ R GLL++A
Sbjct: 262 GLDNDDYDGRLSKGLICMYSSIGFMDYAHYIFNKNSNYYVVQSCNYMINGYIRIGLLDKA 321
Query: 378 EKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAAS 437
+ L +MP D I W S++ GN+ +A + + + ++ + M + + +
Sbjct: 322 QNLFDTMPVR-DKITWTSMIDGYLVIGNV---SEACSLFLYMPEKDAVAWTTMISGHVRN 377
Query: 438 YQFEEA--MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
F EA + +L + V+ L G V G +LH
Sbjct: 378 ELFAEATYLFSEMLTQGVRPLSSTYAILFGAAGAVASLDQGRQLH 422
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 132/278 (47%), Gaps = 23/278 (8%)
Query: 155 VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQE 214
+V W S++ ++ G +DE+R LFD M RN VS+N+++SG ++ + EA++LF EM E
Sbjct: 10 IVYWTSLLSKYSRSGFVDEARALFDIMPERNAVSYNALLSGLLQCGRLSEAMKLFEEMPE 69
Query: 215 QNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER 274
+N+ + S+L A G I + + L + N + A+I + G E
Sbjct: 70 RNV----VSWTSMLCGLADAGKICEAK----SLFEEMPDRNVVSWNAMIVGLIRNGDLEA 121
Query: 275 ALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNH 334
A VF+ P K + WN M+ G A NG EA LF ++ N+ I++ ++++
Sbjct: 122 ARMVFDESPVKNAASWNGMIAGYAENGRMEEARALFDEMEDRNV----ITWTSMVSGYCR 177
Query: 335 SGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI----RSMPSDPDA 390
+G+V + F M K +I ++ M+ G E+A L R P+
Sbjct: 178 AGEVEEGYHLFRTMP-----KRNIVSWTAMIGGFTWNGFYEDALLLFLEMKRGADITPNI 232
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIE--LDKNESCG 426
+ SL AC G + KQ ++I LD ++ G
Sbjct: 233 ETFISLAYACAGLGFHRLGKQLHARLITEGLDNDDYDG 270
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 274/501 (54%), Gaps = 35/501 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K + IHAH+ + D + + IL + G + A +F ++ ++ W +I
Sbjct: 121 LKQGRAIHAHIQSSTFEDDLVLLNFILNM-YAKCGSLEEAQDLFDKMPTKDMVSWTVLIS 179
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+SQS A+ LF ML QP T SL KA G QLH +K G +
Sbjct: 180 GYSQSGQASEALALFPKMLHLG-FQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD 238
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+ + ++++ MYA + EA++ +F+
Sbjct: 239 MNVHVGSSLLDMYARWAHMREAKV--------------------------------IFNS 266
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+ ++N VSWN++I+G+ R + + + LF +M Q +P+ FT S+ ACA G++ QG
Sbjct: 267 LAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQG 326
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+W+H ++ + + + +IDMY K G + A +VF + K+ + WNS++ G A +
Sbjct: 327 KWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQH 386
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EA++LF + + ++P+ I+F++VLTAC+HSG +++ + YF LM + +KI+ + H
Sbjct: 387 GLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAH 445
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ +VD LGRAG L EA K I MP P A +WG+LL +CR H N+++ AA+QI ELD
Sbjct: 446 HVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELD 505
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
++S +VL+SN+YA++ + +A + R +MKE ++KEP CS +E++ EVH FVA H
Sbjct: 506 PHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSH 565
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P E+ + + I+E+G
Sbjct: 566 PMREEIQRMWEKISGKIKEIG 586
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 186/397 (46%), Gaps = 37/397 (9%)
Query: 73 LLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYM 132
L +D++ ++P+R Y + L + G +H + E D + N I+ M
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 133 YANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
YA KCG ++E++ LFDKM +++ VSW +
Sbjct: 150 YA--------------------------------KCGSLEEAQDLFDKMPTKDMVSWTVL 177
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
ISGY ++ + EAL LF +M +P+EFT+ SLL A + G +H F + +
Sbjct: 178 ISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGY 237
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
++N V ++++DMY + A +FN++ K + WN+++ G A G ++LF
Sbjct: 238 DMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQ 297
Query: 313 LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAG 372
+ +P + ++ +V TAC SG + Q K + ++ +P + ++D ++G
Sbjct: 298 MLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSG 356
Query: 373 LLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSN 432
+++A+K+ R + D + W S++S +HG A Q +Q+++ K + +S
Sbjct: 357 SIKDAKKVFRRLVKQ-DIVSWNSIISGYAQHGLGAEALQLFEQMLKA-KVQPNEITFLSV 414
Query: 433 LYAASYQ--FEEAMEERLLMKEVKIEKEPGCSLIEVD 467
L A S+ +E LMK+ KIE + + VD
Sbjct: 415 LTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVD 451
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 286/535 (53%), Gaps = 80/535 (14%)
Query: 35 GDINYAYLVFTQIK-KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTY 91
G I A +F ++ K N+ W ++ G+ +S+ +A LF +M P + +++
Sbjct: 97 GMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEM-------PNKNVVSW 149
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
++ YAQ G L ++ ++ + NT++ M A CG + EAR +FD +
Sbjct: 150 NTMIDGYAQNGRIDSAMYLFEKMPERNV----VSWNTVMSMLAQCGRIEEARRLFDRM-P 204
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL--- 208
E DV++W +MI GL+K G IDE+R LFD+M RN VSWN+MI+GY +N++ EAL+L
Sbjct: 205 ERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFER 264
Query: 209 ----------------------------FREMQEQNI----------------------- 217
F EM ++N+
Sbjct: 265 MPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIF 324
Query: 218 ---------KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
KP++ T VS+L AC+ L + +G+ +H + ++ +T VV+A+I+MY K
Sbjct: 325 SRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSK 384
Query: 269 CGCPERALQVFNT--VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
CG A ++F+ ++ L WN ++ A +GY EAI F ++ S KPD ++++
Sbjct: 385 CGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYV 444
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
+L+AC+H+G V + YF + + I HY+C+VD GRAG L+EA I + +
Sbjct: 445 GLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLET 504
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
P A +WG+LL+ C H N+++ KQAAK+++E++ + Y+L+SN+YA++ ++ EA
Sbjct: 505 KPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARV 564
Query: 447 RLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
RL MK+ ++K+PGCS IEV VH FV G + H ++ +Y LL DL +++ G
Sbjct: 565 RLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAG 619
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 172/340 (50%), Gaps = 25/340 (7%)
Query: 103 LARDGAQLHGR-VVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM 161
L++DG + R + + E D T+I Y CG + EAR +FD VD + +VV W +M
Sbjct: 62 LSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAM 121
Query: 162 IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSE 221
+ G + +I ++ +LF++M ++N VSWN+MI GY +N + A+ LF +M E+N+ S
Sbjct: 122 VGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV-VSW 180
Query: 222 FTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNT 281
T++S+L C ++ R+ L E + I TA+I K G + A +F+
Sbjct: 181 NTVMSMLAQCGRIEEARR-------LFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDR 233
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+P++ + WN+M+ G A N +EA+ LF + +L S+ ++T +G + +A
Sbjct: 234 MPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLP----SWNTMITGLIQNGDLRRA 289
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS----DPDAIIWGSLL 397
+ F M K ++ ++ M+ + G EEA K+ M S P+ + S+L
Sbjct: 290 RKLFNEMP-----KKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVL 344
Query: 398 SACRKHGNIEMAKQAAKQIIELDKNESCGYVLMS--NLYA 435
AC + +Q QII + +V+ + N+Y+
Sbjct: 345 GACSNLAGLGEGQQ-VHQIISKTVYQDSTFVVSALINMYS 383
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 142/313 (45%), Gaps = 52/313 (16%)
Query: 131 YMYANCGFLSEARLMFDEVDTEFD--VVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVS 188
Y+Y + A++ D D V N MI L+K G I E+RRLFD+M + ++
Sbjct: 26 YLYHSINDYRTAKISIPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVIT 85
Query: 189 WNSMIS--------------------------------GYVRNVKFKEALELFREMQEQN 216
W ++IS GY+R+ K +A +LF EM +N
Sbjct: 86 WTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKN 145
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+ + ++++ A+ G I +L E N + ++ M +CG E A
Sbjct: 146 V----VSWNTMIDGYAQNGRIDSAM----YLFEKMPERNVVSWNTVMSMLAQCGRIEEAR 197
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
++F+ +P++ + W +M+ GL+ NG +EA LF + N+ +S+ A++T +
Sbjct: 198 RLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNV----VSWNAMITGYAQNL 253
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
++++A D F M E + ++ M+ L + G L A KL MP + I W ++
Sbjct: 254 RLDEALDLFERMPER-----DLPSWNTMITGLIQNGDLRRARKLFNEMPK-KNVISWTTM 307
Query: 397 LSACRKHGNIEMA 409
++ C + G E A
Sbjct: 308 ITGCVQEGESEEA 320
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 276/483 (57%), Gaps = 36/483 (7%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+IHA +K G+ D ++ ++ S G + A +F +L WN I+ G+ S
Sbjct: 1058 QIHACAMKAGVVLDSFVSTALID-VYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVS 1116
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
A+ L+I ++ S + ++T + KA L + G Q+H VVK+G D F+
Sbjct: 1117 GDFPKALRLYI-LMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFV 1175
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
+ ++ MY KCGE++ +RR+F ++ S +
Sbjct: 1176 TSGVLDMYL--------------------------------KCGEMESARRVFSEIPSPD 1203
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH- 244
V+W +MISG V N + + AL + +M+ ++P E+T +L+ AC+ L A+ QG IH
Sbjct: 1204 DVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHA 1263
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
N + NC + V+T+++DMY KCG E A +F + ++ WN+M+ GLA +G
Sbjct: 1264 NIVKLNC-AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAK 1322
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA++ F ++S + PD ++FI VL+AC+HSG V++A + F M + Y I+P I+HYSC+
Sbjct: 1323 EALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCL 1382
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VDAL RAG +EEAEK+I SMP + A ++ +LL+ACR + E K+ A++++ L+ ++S
Sbjct: 1383 VDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDS 1442
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+SN+YAA+ Q+E R +M++V ++K+PG S +++ +VH FVAG R H +
Sbjct: 1443 AAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETD 1502
Query: 485 EVY 487
+Y
Sbjct: 1503 VIY 1505
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 193/417 (46%), Gaps = 55/417 (13%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH ++++GL + ++ L AG ++ A VF Q+ + +L WNT+I G +
Sbjct: 955 KQIHGIVMRSGLDQ-VVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTL 1013
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL-GLARDGAQLHGRVVKQGLEFDQ 123
S ++ +F+ +L S + P + T S+ +A + L G Q+H +K G+ D
Sbjct: 1014 SGLEECSVGMFVHLLRDS-LLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDS 1072
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ +I +Y+ G + EA +F D FD+ +WN
Sbjct: 1073 FVSTALIDVYSKRGKMEEAEFLFVNQDG-FDLASWN------------------------ 1107
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+++ GY+ + F +AL L+ MQE + + T+V+ A L ++QG+ I
Sbjct: 1108 -------AIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQI 1160
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H +V F L+ V + ++DMY KCG E A +VF+ +P W +M+ G NG E
Sbjct: 1161 HAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQE 1220
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
A+ + ++ S ++PD +F ++ AC+ T + + +I +I +C
Sbjct: 1221 EHALFTYHQMRLSKVQPDEYTFATLVKACS----------LLTALEQGRQIHANIVKLNC 1270
Query: 364 ---------MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+VD + G +E+A L + + A W +++ +HGN + A Q
Sbjct: 1271 AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIA-SWNAMIVGLAQHGNAKEALQ 1326
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 166/360 (46%), Gaps = 36/360 (10%)
Query: 51 NLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQL 110
++ +WN + F Q A+ F+DM + S + LT+ + A L G Q+
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDM-INSRVACDGLTFVVMLTVVAGLNCLELGKQI 957
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
HG V++ GL+ + N +I MY G +S AR +F +++ E D+++WN+MI G G
Sbjct: 958 HGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMN-EVDLISWNTMISGCTLSG- 1015
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
++E ++ +F + ++ P +FT+ S+L A
Sbjct: 1016 LEEC------------------------------SVGMFVHLLRDSLLPDQFTVASVLRA 1045
Query: 231 CAKL-GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
C+ L G IH + L++ V TA+ID+Y K G E A +F L+
Sbjct: 1046 CSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLAS 1105
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WN+++ G ++G +A++L+ +Q S + D I+ + A + Q K ++
Sbjct: 1106 WNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVV 1165
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ + S ++D + G +E A ++ +PS PD + W +++S C ++G E A
Sbjct: 1166 KR-GFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPS-PDDVAWTTMISGCVENGQEEHA 1223
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 171/425 (40%), Gaps = 55/425 (12%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPN--LFIWNTIIRGF 62
K+ HA ++ +G D + ++ + G ++ A +F N L WN I+
Sbjct: 676 KRAHARILTSGHHPDRFVTNNLITM-YAKCGSLSSARKLFDTTPDTNRDLVTWNAILSAL 734
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ + + +L S + R T +FK LHG VK GL++D
Sbjct: 735 AAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWD 794
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG-LAKCGEI---------- 171
F+ ++ +YA G + EAR++FD + DVV WN M+ + C E
Sbjct: 795 VFVAGALVNIYAKFGLIREARVLFDGMAVR-DVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853
Query: 172 -------DESRRLFDKMV-------------------------SRNTVSWNSMISGYVRN 199
D + R ++V + + WN +S +++
Sbjct: 854 RTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQR 913
Query: 200 VKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV 259
+ EA++ F +M + T V +L A L + G+ IH ++ + + V
Sbjct: 914 GEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVG 973
Query: 260 TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK 319
+I+MY K G RA VF + + L WN+M+ G ++G E ++ +F L +L
Sbjct: 974 NCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLL 1033
Query: 320 PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS----CMVDALGRAGLLE 375
PD + +VL AC+ + Y +K + S ++D + G +E
Sbjct: 1034 PDQFTVASVLRACSSL----EGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKME 1089
Query: 376 EAEKL 380
EAE L
Sbjct: 1090 EAEFL 1094
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 37/253 (14%)
Query: 80 VTSPIQPQRL---TYPSLFKAYAQLGLARD---GAQLHGRVVKQGLEFDQFIHNTIIYMY 133
+P+ P+ + P F Q A D G + H R++ G D+F+ N +I MY
Sbjct: 642 TANPLTPRAHLIHSLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMY 701
Query: 134 ANCGFLSEARLMFDEV-DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
A CG LS AR +FD DT D+V WN+++ LA +
Sbjct: 702 AKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHAD---------------------- 739
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
K + LFR ++ + + T+ + C + E +H + V
Sbjct: 740 --------KSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGL 791
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
+ + V A++++Y K G A +F+ + + + WN M+ E EA+ LFS
Sbjct: 792 QWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSE 851
Query: 313 LQSSNLKPDYISF 325
+ +PD ++
Sbjct: 852 FHRTGFRPDDVTL 864
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP--KKGLSCWNSMVFGL 297
G+ H ++T+ + V +I MY KCG A ++F+T P + L WN+++ L
Sbjct: 675 GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSAL 734
Query: 298 AMNG-YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
A + ++ LF L+ S + + V C S + ++ Y +K
Sbjct: 735 AAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESL-----HGYAVKI 789
Query: 357 SIKH----YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
++ +V+ + GL+ EA L M D ++W ++ A
Sbjct: 790 GLQWDVFVAGALVNIYAKFGLIREARVLFDGMAV-RDVVLWNVMMKA 835
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++IHA+++K A DP + ++ + G+I A +F + + WN +I G +Q
Sbjct: 1259 RQIHANIVKLNCAFDPFVMTSLVDM-YAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQ 1317
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGL 103
+ A L F + + + P R+T+ + A + GL
Sbjct: 1318 HGNAKEA-LQFFKYMKSRGVMPDRVTFIGVLSACSHSGL 1355
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/494 (34%), Positives = 271/494 (54%), Gaps = 37/494 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILA--FCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
L +IHAH+I+T L + P + + L+ + P D +Y+ F Q+ P + +NT+IR
Sbjct: 19 LLQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFGQLSHPLVSHYNTMIRA 78
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
S S +P+ +LL+ DM I L+ K+ + G Q+H + K G ++
Sbjct: 79 CSMSDSPQKGLLLYRDMR-RRGIAADPLSSSFAVKSCIRFLYLPGGVQVHCNIFKDGHQW 137
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D + ++ +Y+ C +A C ++FD+M
Sbjct: 138 DTLLLTAVMDLYSLCQRGGDA-------------------------C-------KVFDEM 165
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK--PSEFTMVSLLNACAKLGAIRQ 239
R+TV+WN MIS +RN + ++AL LF MQ + K P + T + LL ACA L A+
Sbjct: 166 PHRDTVAWNVMISCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEF 225
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
GE IH +++ + + ++I MY +CGC ++A +VF + K + W++M+ GLAM
Sbjct: 226 GERIHGYIMERGYRDALNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAM 285
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NGY EAI+ F + + PD +F VL+AC++SG V++ +F M+ + + P++
Sbjct: 286 NGYGREAIEAFEEMLRIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVH 345
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY CMVD LGRAGLL++A +LI SM PD+ +W +LL ACR HG++ + ++ +IEL
Sbjct: 346 HYGCMVDLLGRAGLLDKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIEL 405
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
E+ YVL+ N+Y+++ +E+ E R LMK I+ PGCS IE+ G VHEFV
Sbjct: 406 KAQEAGDYVLLLNIYSSAGHWEKVAEVRKLMKNKSIQTTPGCSTIELKGAVHEFVVDDVS 465
Query: 480 HPKAPEVYLLLNDL 493
H + E+Y L+++
Sbjct: 466 HSRNREIYETLDEI 479
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 265/487 (54%), Gaps = 4/487 (0%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIK-KPNLFIWNTIIRGFSQSS 66
H IK G + + +L ++ AG + + +F ++ N+ WNT+I G +Q+
Sbjct: 130 HGVAIKLGYVRQVFVGNALL-HSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAG 188
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A LF +M + T+ SL ++ G G +H ++ G D +
Sbjct: 189 ETSEACALFREMR-RQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILG 247
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N ++ MY CG L A FD + + +VV+W SM+ LAK G +D +R F++M RN
Sbjct: 248 NALVDMYGKCGDLWMAHRCFDVMPIK-NVVSWTSMLCALAKHGSVDAARDWFEQMPERNI 306
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
+SWN+MIS YV+ +F E L L+ M+ + P E T+ +L+ + G + G IH +
Sbjct: 307 ISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCY 366
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ + + V+ ++IDMY +CG + ++ +F +P K WN ++ LAM+G EA
Sbjct: 367 IQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEA 426
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+ F + S PD I+F+ +L+AC+H G + + YF M Y +KP ++HY+CMVD
Sbjct: 427 VMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVD 486
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR G L +A LI+ MP PD ++WG+L+ ACR HG++E+ K A KQ++EL+
Sbjct: 487 LLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGL 546
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
+VL+SNL + Q+E+ R LM++ +K+ G S IE++ +HEF H + ++
Sbjct: 547 FVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIEINNSIHEFGVEDIRHESSSQI 606
Query: 487 YLLLNDL 493
Y ++ L
Sbjct: 607 YAAVDQL 613
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 200/445 (44%), Gaps = 70/445 (15%)
Query: 1 MKDLKKIHAHLIKTG-LAKDPIAASRILAFC--TSPAGDIN--YAYLVFTQIKKPNLFIW 55
++ L ++HAHL+ G A + + ++C + AGD+ +A +F ++ P+ F +
Sbjct: 16 IRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMFDRVPDPDRFAY 75
Query: 56 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
N++IR +S S P+ A+ L D+L I P T P + KA ++ A HG +
Sbjct: 76 NSLIRAYSNSGCPQEALCLHRDVL-RRGILPNEFTLPFVLKACSRARAAEHALATHGVAI 134
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESR 175
K G F+ N +++ A+ G L ++R +F E+ +VV+WN+MI G A+ GE
Sbjct: 135 KLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGET---- 190
Query: 176 RLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
EA LFREM+ Q + FT VSLL C+K G
Sbjct: 191 ---------------------------SEACALFREMRRQGVLADVFTFVSLLLVCSKEG 223
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
+ G +H ++ + ++ I+ A++DMY KCG A + F+ +P K + W SM+
Sbjct: 224 NLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLC 283
Query: 296 GLAMNGYEN-------------------------------EAIKLFSGLQSSNLKPDYIS 324
LA +G + E + L++ ++S L PD ++
Sbjct: 284 ALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVT 343
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
VL+ +G + + + +++ P + + ++D R G ++ + L M
Sbjct: 344 LAGVLSVHGQNGDLASGRMIHCYIQDSFS-DPGVTVLNSLIDMYARCGQVDTSISLFTEM 402
Query: 385 PSDPDAIIWGSLLSACRKHGNIEMA 409
P + + I W ++ A HG + A
Sbjct: 403 P-NKNTISWNVIIGALAMHGRAQEA 426
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 264/486 (54%), Gaps = 34/486 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K IH IK G + + LA + G +Y +F ++K P++ W T+I + Q
Sbjct: 278 KAIHTQTIKQGFDESSFVIN-TLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQ 336
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+A+ F M S + P + T+ ++ A A L +A+ G Q+HG V++ GL
Sbjct: 337 KGEEEHAVEAFKRMR-KSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALS 395
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N+I+ +Y+ G L A L +F + +
Sbjct: 396 VANSIVTLYSKSGLLKSASL--------------------------------VFHGITRK 423
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SW+++I+ Y + KEA + M+ + KP+EF + S+L+ C + + QG+ +H
Sbjct: 424 DIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVH 483
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ + +V +A+I MY KCG E A ++FN + + W +M+ G A +GY
Sbjct: 484 AHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQ 543
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EAI LF + S LKPDY++FI VLTAC+H+G V+ YF LMT Y+I PS +HY C+
Sbjct: 544 EAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCI 603
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
+D L RAG L EAE +IRSMP D ++W +LL +CR HG+++ + A+Q++ LD N +
Sbjct: 604 IDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSA 663
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
++ ++N+YAA +++EA R LMK + KE G S + V+ +++ FVAG + HP++
Sbjct: 664 GTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQSE 723
Query: 485 EVYLLL 490
+ +L
Sbjct: 724 HITTVL 729
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 183/447 (40%), Gaps = 74/447 (16%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSL 94
G + + +F ++ + W T+I G+ +S A++LF +M V +Q +
Sbjct: 104 GQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVA 163
Query: 95 FKAYAQLGLARD---GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
KA GL + G LHG VK GL F+ + +I MY
Sbjct: 164 LKA---CGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYM----------------- 203
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
K G+I++ R+F KM RN VSW ++I+G V EAL F E
Sbjct: 204 ---------------KVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSE 248
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
M + T L A A + G+ IH + F+ ++ V+ + MY KCG
Sbjct: 249 MWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGK 308
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
+ +++F + + W +++ G E A++ F ++ SN+ P+ +F AV++A
Sbjct: 309 ADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISA 368
Query: 332 CNH----------SGKV---------NQAKDYFTLMTETYKIKPS-----------IKHY 361
C + G V + A TL +++ +K + I +
Sbjct: 369 CANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISW 428
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKHGNIEMAKQAAKQI-- 416
S ++ + G +EA + M + P+ S+LS C +E KQ +
Sbjct: 429 STIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLC 488
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEA 443
I +D +E+ + + ++Y+ EEA
Sbjct: 489 IGID-HEAMVHSALISMYSKCGSVEEA 514
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 143/298 (47%), Gaps = 20/298 (6%)
Query: 133 YANCGFLSEARLMFDEVDTE---------FDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
Y++ G +E R + + E +++ NS + L K G++ +SR +FDKM
Sbjct: 59 YSSPGTATECRELIQQAKQEQLAQNAYSVHNMLELNSELKQLVKQGQLCKSRYMFDKMTH 118
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ +SW ++I+GYV EAL LF M Q ++ +F + L AC I GE
Sbjct: 119 RDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGEL 178
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H F V + + V +A+IDMY K G E+ +VF + K+ + W +++ GL GY
Sbjct: 179 LHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGY 238
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
EA+ FS + S + D +F L A S ++ K + T+T IK S
Sbjct: 239 NMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGK---AIHTQT--IKQGFDESS 293
Query: 363 CMVDALG----RAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+++ L + G + +L M PD + W +L++ + G E A +A K++
Sbjct: 294 FVINTLATMYNKCGKADYVMRLFEKMKM-PDVVSWTTLITTYVQKGEEEHAVEAFKRM 350
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/472 (34%), Positives = 262/472 (55%), Gaps = 6/472 (1%)
Query: 23 ASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTS 82
S + F T L Q W + I S++ A F M + +
Sbjct: 1 GSHTVPFVTRQKSSQIQRILKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRL-A 59
Query: 83 PIQPQRLTYPSLFKAYAQLGLARD--GAQLHGRVVKQGLEFDQFIHNT-IIYMYANCGFL 139
++P +T+ +L + + G LHG K GL+ + T I+ MY+ G
Sbjct: 60 GVEPNHITFIALLSGCGDVSSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRF 119
Query: 140 SEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRN 199
+ARL+FD ++ + + V WN+MI G + G+++ + +LFD+M R+ +SW +MI+G+V+
Sbjct: 120 GKARLVFDFMEDK-NSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKK 178
Query: 200 VKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV 259
+EAL FREMQ +KP +++ L AC LGA+ G W+H +++ F+ N V
Sbjct: 179 GFHEEALAWFREMQISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVS 238
Query: 260 TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK 319
++ID+YC+CGC E A +VF+ + K+ + WNS++ G A NG +E++ F +Q K
Sbjct: 239 NSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFK 298
Query: 320 PDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEK 379
PD ++F LTAC+H G V + YF M ++I P I+HY C+VD RAG LE+A
Sbjct: 299 PDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALN 358
Query: 380 LIRSMPSDPDAIIWGSLLSACRKHG-NIEMAKQAAKQIIELDKNESCGYVLMSNLYAASY 438
+++SMP P+ ++ GSLL+ACR HG N +A++ K + +L+ YV++SN+YAA
Sbjct: 359 VVQSMPMKPNEVVIGSLLAACRNHGNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAADG 418
Query: 439 QFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLL 490
+E A + R MK + ++K+PG S +E+D H F+AG H + + +L
Sbjct: 419 IWEGASKMRRKMKGLGLKKQPGFSSVEIDDCTHVFMAGDSAHVETAYIREVL 470
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 121/310 (39%), Gaps = 63/310 (20%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL + + + S G A LVF ++ N WNT+I G+ +S
Sbjct: 89 LHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYMRSG 148
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
NA+ LF +M + S ++P + +
Sbjct: 149 QVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALA 208
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A LG G +H V+ Q + + + N++I +Y CG + AR +FD+++ VV
Sbjct: 209 ACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKR-TVV 267
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G ES L FR+MQE+
Sbjct: 268 SWNSVIVGFAANGNAHES-------------------------------LVYFRKMQEEG 296
Query: 217 IKPSEFTMVSLLNACAKLGAIRQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERA 275
KP T L AC+ +G + +G + + ++D+Y + G E A
Sbjct: 297 FKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDA 356
Query: 276 LQVFNTVPKK 285
L V ++P K
Sbjct: 357 LNVVQSMPMK 366
>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Brachypodium distachyon]
Length = 593
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/490 (32%), Positives = 266/490 (54%), Gaps = 39/490 (7%)
Query: 5 KKIHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+++HA K G L + P+ + + + G+ A VF ++ ++ W ++ F
Sbjct: 133 RQVHAVAEKGGFLGRLPVRNALVTLYGV--CGECGDARRVFDEMASRDVVSWTALVSAFV 190
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ A++L M V P T + A +LG AR G +HG +++ +
Sbjct: 191 RGGRFAEALVLVGQMDVV----PNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKL 246
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ N ++ MY KC ++D +RR+FD+++
Sbjct: 247 IVGNAVLDMYV--------------------------------KCEKLDLARRVFDRLLV 274
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
R+ +SW MISG V+ +ALE+F EMQ+ +KP + + ++L+AC LGA+ G W+
Sbjct: 275 RDVISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALESGRWV 334
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++ E + V T+++DMY KCGC E +L +F +P K LS WN+++ G A++G+
Sbjct: 335 HEYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALINGFALHGHG 394
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA++ F + +S L P+ +SFI VL AC HSG V + F M +YK+ P +HY
Sbjct: 395 REALEHFDRMVASGLAPNEVSFIIVLGACCHSGLVQEGLQLFESMKNSYKLSPWEEHYGS 454
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+VD LGRAGL+ EA + ++MP P WG+LLSAC+ H ++ ++Q + + EL+ +E
Sbjct: 455 VVDLLGRAGLIHEAYSVTKAMPMRPAVFTWGALLSACQAHRQVDFSQQILRHVHELESSE 514
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
S Y L+SN+YA ++++ + R LM E ++KEPG S+IEV+G+ EFV G + H
Sbjct: 515 SGVYALLSNIYAVNHRWADVKRVRGLMSEKGLQKEPGSSVIEVNGKTSEFVVGQKNHKNV 574
Query: 484 PEVYLLLNDL 493
E+ +L+ L
Sbjct: 575 DEICAMLSIL 584
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 9/147 (6%)
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR------QGEWIHNFLVTNCFELN 255
F+ L + + +P +T+ + L ACA+LGA +G +H F
Sbjct: 88 FRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAGGDDGGLREGRQVHAVAEKGGFLGR 147
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
V A++ +Y CG A +VF+ + + + W ++V G EA+ L +
Sbjct: 148 LPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFVRGGRFAEALVLVGQM-- 205
Query: 316 SNLKPDYISFIAVLTACNHSGKVNQAK 342
++ P+ + VL AC G K
Sbjct: 206 -DVVPNEGTLACVLVACGRLGAARAGK 231
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 271/481 (56%), Gaps = 45/481 (9%)
Query: 27 LAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQP 86
LA S G+I A L+F QI +P+L +N +I G++ ++ +++ LF ++LV+
Sbjct: 248 LACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSG---- 303
Query: 87 QRLTYPSL------FKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLS 140
+++ S+ F + L L R +HG K G+ + + + +Y+
Sbjct: 304 EKVNSSSIVGLIPVFFPFGHLHLTR---CIHGFCTKSGVVSNSSVSTALTTVYS------ 354
Query: 141 EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNV 200
+ EI+ +R LFD+ ++ SWN+MISGY +N
Sbjct: 355 --------------------------RLNEIESARLLFDESSEKSLASWNAMISGYAQNG 388
Query: 201 KFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
++A+ LF+EMQ+ ++P+ T+ S+L+ACA+LGA+ G+W+H+ + FE N V T
Sbjct: 389 LTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVST 448
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
A+IDMY KCG A ++F+ +P+K WN+M+ G ++GY +EA+ LF+ + S + P
Sbjct: 449 ALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSP 508
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
++F++VL AC+H+G V + + F M + +P +HY+CMVD LGRAG L++A
Sbjct: 509 TGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDF 568
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQF 440
IR MP +P +WG+LL AC H + +A+ A+ ++ ELD YVL+SN+Y+A +
Sbjct: 569 IRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNY 628
Query: 441 EEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEM 500
EA R ++K K+ K PGC+LIEV +H F +G + HP+A +Y +L L ++E
Sbjct: 629 PEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREA 688
Query: 501 G 501
G
Sbjct: 689 G 689
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 190/427 (44%), Gaps = 37/427 (8%)
Query: 12 IKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNA 71
I G D S I+A C + A VF + + + +WNT++ G ++S A
Sbjct: 133 IVAGFGSDLFVGSAIVA-CYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEA 191
Query: 72 ILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIY 131
IL+F DM V I T ++ A+L G + +K G ++ +
Sbjct: 192 ILIFGDM-VKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLAC 250
Query: 132 MYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNS 191
+Y+ KCGEI+ +R LF ++ + VS+N+
Sbjct: 251 LYS--------------------------------KCGEIETARLLFGQIGQPDLVSYNA 278
Query: 192 MISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC 251
MISGY N + + ++ LF+E+ K + ++V L+ G + IH F +
Sbjct: 279 MISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSG 338
Query: 252 FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
N+ V TA+ +Y + E A +F+ +K L+ WN+M+ G A NG +AI LF
Sbjct: 339 VVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQ 398
Query: 312 GLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRA 371
+Q ++P+ ++ ++L+AC G ++ K L+ + +I + ++D +
Sbjct: 399 EMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRE-SFESNIFVSTALIDMYAKC 457
Query: 372 GLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMS 431
G + EA++L MP + +A+ W +++S HG A +++ + G +S
Sbjct: 458 GSITEAQRLFSMMP-EKNAVTWNAMISGYGLHGYGHEALNLFNEMLH-SRVSPTGVTFLS 515
Query: 432 NLYAASY 438
LYA S+
Sbjct: 516 VLYACSH 522
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 206/489 (42%), Gaps = 76/489 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ L + HA +I GL D + ++ L S I+ A L+F+ I P+LF++N +IR
Sbjct: 23 LHQLNQTHAQIILNGLHNDLVTVTK-LTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIR 81
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
FS +++P +A+ L+ + ++P++P TY + + LGL + G
Sbjct: 82 AFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS---IVAGFG 138
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ + I+ Y ++ AR +FD + E D V WN+M+ GL
Sbjct: 139 SDLFVGSAIVACYFKFSRVAAARKVFDGM-LERDTVLWNTMVSGL--------------- 182
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
V+N F EA+ +F +M + I T+ ++L A+L + G
Sbjct: 183 ----------------VKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALG 226
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
I + F + V+T + +Y KCG E A +F + + L +N+M+ G N
Sbjct: 227 MGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCN 286
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAV-----------LTACNHS-------------- 335
+++LF L S K + S + + LT C H
Sbjct: 287 NETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVS 346
Query: 336 -------GKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS-- 386
++N+ + L E+ + S+ ++ M+ + GL E+A L + M
Sbjct: 347 TALTTVYSRLNEIESARLLFDESS--EKSLASWNAMISGYAQNGLTEKAISLFQEMQKCE 404
Query: 387 -DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMS--NLYAASYQFEEA 443
P+ + S+LSAC + G + + K +I + ES +V + ++YA EA
Sbjct: 405 VRPNPVTVTSILSACAQLGALSLGKW-VHDLINRESFESNIFVSTALIDMYAKCGSITEA 463
Query: 444 MEERLLMKE 452
+M E
Sbjct: 464 QRLFSMMPE 472
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 173/475 (36%), Positives = 278/475 (58%), Gaps = 11/475 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K+ +IH L KTGL D + ++ G + +A +F ++ + + +N++I
Sbjct: 141 VKEGMQIHGFLKKTGLWSDLFLQNCLIGLYLK-CGWLGFARQIFDRMPQRDSVSYNSMID 199
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRL-TYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G+ + + +A LF D++ P + + L ++ S+ YAQ DG + ++ +
Sbjct: 200 GYVKCGSTESARELF-DLM---PEEMKNLISWNSMISGYAQ---TSDGVDIASKLFSEMP 252
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D N++I Y G + +A+ +FD V DVV W++MI G AK G + +++ LFD
Sbjct: 253 DKDLISWNSMIDGYVKHGRIEDAKYLFD-VMPRRDVVTWSTMIDGYAKLGFVHQAKTLFD 311
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIR 238
+M R+ VS+NSMI+GYV+N EALE+F +M+ E ++ P E T+V +L+A A+LG +
Sbjct: 312 QMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLS 371
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+ +H ++V F L + A+IDMY KCG + A+ VF + K + WN+M+ GLA
Sbjct: 372 KAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKSIDHWNAMIGGLA 431
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
++G A + ++ ++KPD I+F+ +L AC+HSG V + F LM +KI+P +
Sbjct: 432 IHGLGESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELMRRKHKIEPRL 491
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD L R+G +E A+ LI MP +P+ +IW + L+AC H E + AK +I
Sbjct: 492 QHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLAACNHHKEFETGELVAKHLIW 551
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEF 473
YVL+SNLYA+ ++++ R +MKE KIEK PGCS IE+DG VHEF
Sbjct: 552 EAGYNPSSYVLLSNLYASFGKWKDVRRIRTIMKERKIEKVPGCSWIELDGRVHEF 606
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 112/233 (48%), Gaps = 9/233 (3%)
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
WN++I + + AL LF M E + +F++ +L AC++LG +++G IH FL
Sbjct: 93 WNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIHGFLK 152
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
+ + +I +Y KCG A Q+F+ +P++ +NSM+ G G A +
Sbjct: 153 KTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARE 212
Query: 309 LFSGLQSSNLKPDYISFIAVLTA-CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
LF L +K + IS+ ++++ S V+ A F+ M + I ++ M+D
Sbjct: 213 LFD-LMPEEMK-NLISWNSMISGYAQTSDGVDIASKLFSEMPDKDLIS-----WNSMIDG 265
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
+ G +E+A+ L MP D + W +++ K G + AK Q+ D
Sbjct: 266 YVKHGRIEDAKYLFDVMPRR-DVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRD 317
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 158/498 (31%), Positives = 282/498 (56%), Gaps = 3/498 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
KK+H H+IKTG+ + ++ ++ G I A +F Q+ + W +I+ +Q
Sbjct: 23 KKLHCHIIKTGIDQCKSLSNNLINM-YGKCGLIQDALNLFNQLPHRDPISWASILTANNQ 81
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
++ P + +F M +QP + L KA A LG + G Q+H + + D
Sbjct: 82 ANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDV 141
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++++ MYA CG R++FD + ++ + ++W +MI G A+ G ++ +LF KM +
Sbjct: 142 VKSSLVDMYAKCGLPDIGRVVFDSISSK-NSISWTAMISGYAQSGRKLDAIQLFQKMPVK 200
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSE-FTMVSLLNACAKLGAIRQGEWI 243
N +SW ++ISG V++ + ++ LF EM+ + I + F + S++ A A L + G+ I
Sbjct: 201 NLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQI 260
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H ++ +E + V A++DMY KC A ++F + ++ + W S++ G A +G
Sbjct: 261 HCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLA 320
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA+ L++ + S+ LKP+ ++F+ ++ AC+H G V++ + +F M + Y I PS++HY+C
Sbjct: 321 EEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTC 380
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
++D L R+G LEEAE LI++MP PD W +LLSAC H N + + A ++ L +
Sbjct: 381 LLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPED 440
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
Y+L+SN+YA++ +E + R LM ++++KEPG S I + E F+AG HP
Sbjct: 441 PSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQVFLAGETSHPAK 500
Query: 484 PEVYLLLNDLGLLIQEMG 501
E++ LL +L +++ G
Sbjct: 501 EEIFGLLEELDAEMKKRG 518
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 39/243 (16%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G +LH ++K G++ + + N +I MY CG + +A
Sbjct: 22 GKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDA------------------------ 57
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN-IKPSEFTMV 225
LF+++ R+ +SW S+++ + L +F M +Q+ ++P +
Sbjct: 58 --------LNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFA 109
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
L+ ACA LGA++QG+ +H + + + +V ++++DMY KCG P+ VF+++ K
Sbjct: 110 CLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSK 169
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
W +M+ G A +G + +AI+LF + NL +S+ A+++ SG N ++
Sbjct: 170 NSISWTAMISGYAQSGRKLDAIQLFQKMPVKNL----LSWTALISGLVQSG--NWVDSFY 223
Query: 346 TLM 348
M
Sbjct: 224 LFM 226
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
Query: 224 MVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP 283
+V L ACA+ + G+ +H ++ + + +I+MY KCG + AL +FN +P
Sbjct: 6 LVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLP 65
Query: 284 KKGLSCWNSMVFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAK 342
+ W S++ + + +F + + L+PD+ F ++ AC G + Q K
Sbjct: 66 HRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGK 125
Query: 343 D-YFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
+ T + +K S +VD + GL + + S+ S ++I W +++S
Sbjct: 126 QVHATFIVSPVSDDDVVK--SSLVDMYAKCGLPDIGRVVFDSI-SSKNSISWTAMISGYA 182
Query: 402 KHG 404
+ G
Sbjct: 183 QSG 185
>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 544
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 248/413 (60%), Gaps = 9/413 (2%)
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T + + Y G D ++ + ++ D N++I+ YA G + A+ +F+ V
Sbjct: 48 TNNAFIQGYCSAGRVTDARRVFDGMPRR----DTVSFNSMIHGYAVSGDVGSAQRLFERV 103
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
V W SM+ G + G+++ +RR+F++M R+ VSWN+MISG V N EAL LF
Sbjct: 104 LAPTPVT-WTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPVEALCLF 162
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
R M E+ P+ T+VS+L+AC GA+ G+W+H F+ + + TA++DMY KC
Sbjct: 163 RWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTALVDMYAKC 222
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYISFIAV 328
G E AL+VF + + WN+M+ GLAMNGY +A+ +F ++ + + PD ++F+ V
Sbjct: 223 GAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQMELNGTVAPDEVTFVGV 282
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC+H+G V+ K++F + + Y ++ ++HY+CMVD L R+G L+EA KLI MP P
Sbjct: 283 LLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARSGHLQEAHKLITEMPMKP 342
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D ++W +LL CR H N++MA+ I E++ S +VL+SNLYAA ++ + R
Sbjct: 343 DVVVWRALLGGCRLHKNVKMAENV---ISEMEATCSGDHVLLSNLYAAVGRWNGVEDVRR 399
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
M+ IEK PGCS +E+DG +HEF++G + HP +++ L ++G +Q+ G
Sbjct: 400 TMRSKGIEKIPGCSSVEMDGSIHEFISGDKSHPSYDDIHAKLIEIGGRMQQHG 452
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 159/380 (41%), Gaps = 82/380 (21%)
Query: 11 LIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPR 69
L + LA P+ + ++A FC AGD+ A VF ++ + +L WN +I G + P
Sbjct: 99 LFERVLAPTPVTWTSMVAGFCR--AGDVESARRVFEEMPERDLVSWNAMISGCVGNRLPV 156
Query: 70 NAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTI 129
A+ LF M+ + P R T S+ A G G +H V K+ L +D+F+ +
Sbjct: 157 EALCLFRWMMEEGFV-PNRGTVVSVLSACTGAGALETGKWVHVFVEKKRLRWDEFLGTAL 215
Query: 130 IYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSW 189
+ MYA CG + A +F + + WN+MI GLA
Sbjct: 216 VDMYAKCGAVELALEVFTGLRAR-NTCTWNAMINGLA----------------------- 251
Query: 190 NSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
++GY +AL++FR+M+ + P E T V +L AC+ G + G+
Sbjct: 252 ---MNGYS-----AKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFVDAGK------- 296
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG-----LSCWNSMVFGLAMNGYE 303
+ F T+P+K L + MV LA +G+
Sbjct: 297 ----------------------------EHFYTIPQKYGVELILEHYACMVDLLARSGHL 328
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
EA KL + + +KPD + + A+L C V A++ + M T + S
Sbjct: 329 QEAHKLITEMP---MKPDVVVWRALLGGCRLHKNVKMAENVISEMEATCSGDHVL--LSN 383
Query: 364 MVDALGRAGLLEEAEKLIRS 383
+ A+GR +E+ + +RS
Sbjct: 384 LYAAVGRWNGVEDVRRTMRS 403
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +H + K L D + ++ + G + A VFT ++ N WN +I G +
Sbjct: 194 KWVHVFVEKKRLRWDEFLGTALVDM-YAKCGAVELALEVFTGLRARNTCTWNAMINGLAM 252
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ--GLEFD 122
+ A+ +F M + + P +T+ + A + G D + H + Q G+E
Sbjct: 253 NGYSAKALDMFRQMELNGTVAPDEVTFVGVLLACSHAGFV-DAGKEHFYTIPQKYGVELI 311
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG 164
+ ++ + A G L EA + E+ + DVV W +++ G
Sbjct: 312 LEHYACMVDLLARSGHLQEAHKLITEMPMKPDVVVWRALLGG 353
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 31/225 (13%)
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
SL C KLG F L T A I YC G A +VF+ +P++
Sbjct: 32 SLHAVCTKLG----------------FLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRR 75
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
+NSM+ G A++G A +LF + L P +++ +++ +G V A+ F
Sbjct: 76 DTVSFNSMIHGYAVSGDVGSAQRLFERV----LAPTPVTWTSMVAGFCRAGDVESARRVF 131
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRK 402
M E + ++ M+ L EA L R M + P+ S+LSAC
Sbjct: 132 EEMPER-----DLVSWNAMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTG 186
Query: 403 HGNIEMAK--QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
G +E K + L +E G L+ ++YA E A+E
Sbjct: 187 AGALETGKWVHVFVEKKRLRWDEFLGTALV-DMYAKCGAVELALE 230
>gi|326491225|dbj|BAK05712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 223/335 (66%), Gaps = 8/335 (2%)
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV-SRNTVSWNSMISGYVRNVKFKEAL 206
E DVVA N+++ AKCG+ + R F MV ++N V+WN+MIS + R + +EAL
Sbjct: 192 EAGVALDVVACNALVDMYAKCGDSAAALRCFRTMVPTKNLVTWNTMISAHARAGELQEAL 251
Query: 207 ELFREM-QEQNIK----PSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVV-T 260
ELFREM Q+Q P + T V++L ACA+LGA+ G W+H ++V + VV
Sbjct: 252 ELFREMLQQQGCTSSPLPDDATFVAVLGACARLGALDAGRWVHAYIVRTGRDAAAGVVGN 311
Query: 261 AIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKP 320
A+IDMY KCG E+A +VF+ + ++ + + SM+ GLAM+G EA+ LF ++ + ++P
Sbjct: 312 ALIDMYAKCGAVEQAAEVFDAMTRRDVYTYTSMISGLAMHGRGEEALALFGDMRQARVRP 371
Query: 321 DYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKL 380
+ ++F+ VL+AC H+G + +F M E + + P I+HY C+VD LGRAG L+EAE+L
Sbjct: 372 NEVTFLGVLSACCHAGNIEDGLRHFDAMAELHGVTPGIEHYGCVVDMLGRAGRLDEAEEL 431
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQF 440
+ MP PDAIIWGSLL+ACR HG+++ A++ +++ E D++++ YVLMSN+YA +
Sbjct: 432 VSVMPIRPDAIIWGSLLAACRAHGHVDRAERVMRRMAE-DEDDAGDYVLMSNMYAQEGRH 490
Query: 441 EEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+A++ R M+ K++K PGCSLIE+DG VHEF A
Sbjct: 491 GKAVQVRRQMRRGKVDKVPGCSLIEIDGVVHEFQA 525
>gi|449440231|ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
gi|449521725|ref|XP_004167880.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 521
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 290/511 (56%), Gaps = 48/511 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K+L++ A ++K G ++++AF + SP G + +A +F + + FI NT+I
Sbjct: 12 IKELEQAQAFIVKAGFYNHIPIITKLIAFSSLSPLGSLPHACALFQETSMDDSFICNTMI 71
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQ-----------LG---LAR 105
R +S + P A+L++ + + + TY + +A A+ G ++R
Sbjct: 72 RAYSNTVFPLKALLIY-NRMQRMDVDSDHFTYNFVLRACARAIKCTEMDDQCFGHHIISR 130
Query: 106 DGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDV---------- 155
G+++H R++K G + D + N+++ +Y+ G + ARL+F+E+ + V
Sbjct: 131 KGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFNEMTVKTAVSWNIMMSAYN 190
Query: 156 --------------------VAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISG 195
V+WN+++ + + +R++F++M R+ VSWNS+ISG
Sbjct: 191 RVHDYKSADVLLESMPQTNAVSWNTLLARYIRLNNLVAARKVFEEMPERDVVSWNSIISG 250
Query: 196 YVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELN 255
YV +K AL+LF M++ NI+ +E T +S+L ACA+LGA+ G+ IH+ L + +
Sbjct: 251 YVNVKDYKGALDLFHSMKQWNIRATEVTFISILGACAELGALEIGKKIHDSLKEKHYRIE 310
Query: 256 TIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQS 315
+ AI+DMY KCG AL+VFN + K +SCWN+M+ GLA++G+ A+++F +++
Sbjct: 311 GYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWNAMIMGLAVHGHCERALEMFDSMKA 370
Query: 316 --SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGL 373
+ KP+ I+FIA+L AC+H G + + + +F+LM YKI P +KHY CM+D L R G
Sbjct: 371 EDGDHKPNRITFIALLIACSHKGLLAEGRHFFSLMVTKYKIMPDLKHYGCMIDLLSRWGF 430
Query: 374 LEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNL 433
LEEA +I++ P +++W +LL CR H ++E+ +++ +++ EL+ + YVL+SN+
Sbjct: 431 LEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELEPGKDGDYVLLSNI 490
Query: 434 YAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
YA ++++ R M + K+ G S +
Sbjct: 491 YAEEERWDDVERLRKEMINYGVCKKAGSSHV 521
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/477 (33%), Positives = 266/477 (55%), Gaps = 34/477 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +LK++H + +K + + + G ++YA+ VF I+ + WN +I
Sbjct: 408 LPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIG 467
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+SQSS PR ++ + M +S + P T SL A +Q+ + G ++HG +++ LE
Sbjct: 468 GYSQSSDPRLSLDAYFQM-KSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLE 526
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F++ +++ +Y +CG LS A + LFD
Sbjct: 527 RDSFVYISLLSLYIHCGELSTAHV--------------------------------LFDA 554
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M + VSWN+M++GY++N + AL LFR+M ++P E +M+S+ AC+ L ++R G
Sbjct: 555 MEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLG 614
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
H + + E N + ++IDMY K G + +VFN + ++ ++ WN+MV G ++
Sbjct: 615 REAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIH 674
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G EAIKLF +Q + PD ++F+ VLTACNHSG V++ Y M + + P++KH
Sbjct: 675 GRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKH 734
Query: 361 YSCMVDALGRAGLLEEAEKL-IRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
Y+C++D L RAG L+EA K+ M +P IW LLS+CR H N+EM ++ A ++
Sbjct: 735 YACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVS 794
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
+ + YVL+SNLYA S +++E + R MKE+ + K+ GCS IE++G+V FVAG
Sbjct: 795 EPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAG 851
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 212/498 (42%), Gaps = 89/498 (17%)
Query: 5 KKIHAHLIKTG-LAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+KIH + ++ L+ D + +R++ + C SP + + VF ++K NLF WN +I
Sbjct: 101 RKIHQLVSESARLSNDDVLCTRVITMYSMCGSP----DDSRSVFDALRKKNLFQWNAVIS 156
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+S++ N + +F+ M+ S + P T+P + KA A + + G +HG VVK L
Sbjct: 157 SYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLV 216
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F+ N ++ Y G +S+A +F ++ E ++V+WNSMI + G +E L +
Sbjct: 217 EDVFVSNALVSFYGTNGSVSDALRVF-KIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
M+ ++ E P T+ ++L CA+ I G
Sbjct: 276 MMEKD---------------------------DEIAFTPDVATLATVLPVCARDREIGVG 308
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ +H + + +V A++DMY KCGC A +F K + WN+MV G +
Sbjct: 309 KGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAA 368
Query: 301 GYENEAIKLFSGLQS--SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
G ++ L + + +L+ D ++ + + C + K+ Y +K
Sbjct: 369 GDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKEL-----HCYSLKQEF 423
Query: 359 KH-----YSCMVDALGRAGLLEEAEKLIRSMPSD-------------------------- 387
H + V + + G L A ++ S+ S
Sbjct: 424 VHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYF 483
Query: 388 --------PDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD-KNESCGYVLMSNLY---- 434
PD SLLSAC + ++++ K+ II + +S Y+ + +LY
Sbjct: 484 QMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCG 543
Query: 435 --AASYQFEEAMEERLLM 450
+ ++ +AME++ L+
Sbjct: 544 ELSTAHVLFDAMEDKTLV 561
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 270/497 (54%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH + +++G + S L + G + A +F + + N+ WN++I + Q
Sbjct: 256 KEIHGYAMRSGF-DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P+ A+L+F ML ++P ++ A A LG G +H V+ GL+ +
Sbjct: 315 NENPKEAMLIFQKML-DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I MY KC E+D + +F K+ SR
Sbjct: 374 VVNSLISMYC--------------------------------KCKEVDTAASMFGKLQSR 401
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
VSWN+MI G+ +N + +AL F +M+ + +KP FT VS++ A A+L +WIH
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ +C + N V TA++DMY KCG A +F+ + ++ ++ WN+M+ G +G+
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A++LF +Q +KP+ ++F++V++AC+HSG V F +M E Y I+ S+ HY M
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L EA I MP P ++G++L AC+ H N+ A++AA+++ EL+ ++
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
+VL++N+Y A+ +E+ + R+ M + K PGCS++E+ EVH F +G HP +
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSK 701
Query: 485 EVYLLLNDLGLLIQEMG 501
++Y L L I+E G
Sbjct: 702 KIYAFLEKLICHIKEAG 718
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 175/351 (49%), Gaps = 36/351 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K+L++I + K GL ++ +++++ FC G ++ A VF I +++T++
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRY--GSVDEAARVFEPIDSKLNVLYHTML 107
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+GF++ S A+ F+ M ++P + L K R G ++HG +VK G
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDD-VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F + MYA KC +++E+R++FD
Sbjct: 167 SLDLFAMTGLENMYA--------------------------------KCRQVNEARKVFD 194
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M R+ VSWN++++GY +N + ALE+ + M E+N+KPS T+VS+L A + L I
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ IH + + + F+ + TA++DMY KCG E A Q+F+ + ++ + WNSM+
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N EA+ +F + +KP +S + L AC G + + + L E
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 123/239 (51%), Gaps = 2/239 (0%)
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
+ G +DE+ R+F+ + S+ V +++M+ G+ + +AL+ F M+ +++P +
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
LL C +R G+ IH LV + F L+ +T + +MY KC A +VF+ +P++
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
L WN++V G + NG A+++ + NLKP +I+ ++VL A + ++ K+
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+ + + +VD + G LE A +L M + + + W S++ A ++ N
Sbjct: 261 YAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGML-ERNVVSWNSMIDAYVQNEN 317
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 94/210 (44%), Gaps = 8/210 (3%)
Query: 212 MQEQNIKPS---EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
+ E+N P+ E LL C+ L +RQ I + N T ++ ++C+
Sbjct: 25 LSERNYIPANVYEHPAALLLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCR 81
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G + A +VF + K +++M+ G A ++A++ F ++ +++P +F +
Sbjct: 82 YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYL 141
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L C ++ K+ L+ ++ + + + + + + EA K+ MP +
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKS-GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ER 199
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
D + W ++++ ++G MA + K + E
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
>gi|115469684|ref|NP_001058441.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|53791823|dbj|BAD53889.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|53792844|dbj|BAD53877.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113596481|dbj|BAF20355.1| Os06g0694300 [Oryza sativa Japonica Group]
gi|125598347|gb|EAZ38127.1| hypothetical protein OsJ_22476 [Oryza sativa Japonica Group]
Length = 648
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/462 (35%), Positives = 267/462 (57%), Gaps = 10/462 (2%)
Query: 39 YAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTS----PIQPQRLTYPSL 94
YA VF+ + P+ F+ ++R + P +F + P P + +L
Sbjct: 90 YALNVFSAVSPPDPFLAAALLRFAFLTQPPLLPFRVFSHLRRAHGAELPFLP--FAFSTL 147
Query: 95 FK-AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
K A A L A V+ G + +F+ N++I Y CG + AR +FDE+ E
Sbjct: 148 AKSATASRSLPAAAAAHAVSVLVGGFDRHRFVENSLIGAYVACGDVGAARKVFDEM-VEK 206
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
DV++W S+++ + G++ + +F + ++ V+W +M++GY +N +ALE+F M
Sbjct: 207 DVISWTSIVVAYTRSGDMRSAEEVFGRCPVKDMVAWTAMVTGYAQNAMPVKALEVFDRMA 266
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
E + E ++ ++ACA+LGA+R+ W+ F N +V + ++DMY KCG +
Sbjct: 267 ELGMVIDEVSLTGAISACAQLGALRRAAWVQEIAERTGFGNNVVVGSGLVDMYAKCGLID 326
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGL-QSSNLKPDYISFIAVLTAC 332
A +VF + +K + ++SM+ GLA +G +EAI LF + +N++P++++FI VLTAC
Sbjct: 327 EASKVFYGMQEKNVYTYSSMIAGLASHGRASEAIALFKEMVNRANVEPNHVTFIGVLTAC 386
Query: 333 NHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII 392
+H+G V + + YF M + Y I PS HY+CMVD LGRAGL++EA L+RSM P +
Sbjct: 387 SHAGMVGEGRYYFAQMKDKYGIMPSADHYACMVDLLGRAGLVDEALDLVRSMSVTPHGGV 446
Query: 393 WGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKE 452
WG+LL ACR HG E+AK A+ + +L+ YVL+SN+ A++ ++EE + R+LM++
Sbjct: 447 WGALLGACRIHGKSEIAKVVAEHLFKLEPESIGNYVLLSNILASAGKWEEVSKVRILMRK 506
Query: 453 VKIEKEPGCSLIE-VDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+++K+P SL E DG VH+F AG HP+ E+ L +L
Sbjct: 507 QRLKKDPAVSLFEGRDGLVHQFFAGDNAHPRTHEIKKALLEL 548
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 280/490 (57%), Gaps = 35/490 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
++++HAH++ G +D + A+++L + + I+ AY +F + + W+ ++ GF+
Sbjct: 19 IRQVHAHVVANGTLQDLVIANKLL-YTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFA 77
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
++ F ++L + P T P + + + G +H V+K GL D
Sbjct: 78 KAGDHAGCYATFRELL-RCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDH 136
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ +++ MYA KC +++++RLF++M+S
Sbjct: 137 FVCASLVDMYA--------------------------------KCIVVEDAQRLFERMLS 164
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
++ V+W MI Y + E+L LF M+E+ + P + MV+++NACAKLGA+ + +
Sbjct: 165 KDLVTWTVMIGAYA-DCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFA 223
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
++++V N F L+ I+ TA+IDMY KCG E A +VF+ + +K + W++M+ +G
Sbjct: 224 NDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRG 283
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
+AI LF + S + P+ ++F+++L AC+H+G + + +F M E + ++P +KHY+C
Sbjct: 284 KDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTC 343
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD LGRAG L+EA +LI +M + D +W +LL ACR H +E+A++AA ++EL
Sbjct: 344 MVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQN 403
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
YVL+SN+YA + ++E+ + R +M + K++K PG + IEVD + ++F G R HP++
Sbjct: 404 PGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQS 463
Query: 484 PEVYLLLNDL 493
E+Y +L L
Sbjct: 464 KEIYEMLMSL 473
>gi|356527575|ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Glycine max]
Length = 577
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 274/482 (56%), Gaps = 17/482 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDIN------------YAYLVFTQIK 48
+ L ++HAH I TGL P+ IL S + YA +F I
Sbjct: 13 ISQLHQVHAHSITTGLL--PLHTFPILNNILSTLSSLLTTSSNSNSIITFYALSLFHSIP 70
Query: 49 KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA 108
P+ F +NT+IR + +P A+ LF + S + P T+P + KA AQL
Sbjct: 71 NPSTFSFNTLIRIHTLLLSPLPALHLFSTLRRLS-LPPDFHTFPFVLKASAQLHSLSLAQ 129
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
LH + +K GL D F NT+I +Y+ +++A +F E DVV++N++I GL K
Sbjct: 130 SLHSQALKFGLLPDLFSLNTLIGVYSIHHRVNDAHKLFYEC-PHGDVVSYNALIHGLVKT 188
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
+I +R LFD+M R+ +SW +MI+GY +A+ELF EM +KP +VS+L
Sbjct: 189 RQISRARELFDEMPVRDEISWGTMIAGYSHLKLCNQAIELFNEMMRLEVKPDNIALVSVL 248
Query: 229 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 288
+ACA+LG + QG +H+++ N +++ + T ++D+Y KCGC E A VF + +K +
Sbjct: 249 SACAQLGELEQGSIVHDYIKRNRIRVDSYLATGLVDLYAKCGCVETARDVFESCMEKYVF 308
Query: 289 CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLM 348
WN+M+ G A++G + ++ FS + S +KPD ++ + VL C+H+G V +A+ F M
Sbjct: 309 TWNAMLVGFAIHGEGSMVLEYFSRMVSEGVKPDGVTLLGVLVGCSHAGLVLEARRIFDEM 368
Query: 349 TETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEM 408
Y +K KHY CM D L RAGL+EE +++++MPS D WG LL CR HGN+E+
Sbjct: 369 ENVYGVKREGKHYGCMADMLARAGLIEEGVEMVKAMPSGGDVFAWGGLLGGCRIHGNVEV 428
Query: 409 AKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME-ERLLMKEVKIEKEPGCSLIEVD 467
AK+AA+Q++E+ + Y +M+N+YA + Q+++ ++ R L + +K G SLI ++
Sbjct: 429 AKKAAQQVMEIKPEDGGVYSVMANIYAHTEQWDDLVKVRRSLSANKRAKKITGRSLIRLN 488
Query: 468 GE 469
E
Sbjct: 489 DE 490
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/490 (34%), Positives = 271/490 (55%), Gaps = 36/490 (7%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + +K GL+ + + ++ G + A+ VF + +L WN+II Q
Sbjct: 190 MHVYAVKHGLSGELFVCNALIDV-YGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGG 248
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A+ LF M+ S + P LT SL A AQ G +H V ++G +
Sbjct: 249 KVAAAVELFHGMM-ESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVG---- 303
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
D++A N+M+ AK +ID ++++FD + R+
Sbjct: 304 ---------------------------DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDV 336
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
VSWN++I+GY++N EA+ ++ +M + +KP + T VS+L A + LG ++QG +H
Sbjct: 337 VSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHA 396
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+ L+ V T +ID+Y KCG A+ +F +P++ WN+++ GL ++G+ +
Sbjct: 397 LSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAK 456
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+ LFS +Q +KPD+++F+++L AC+H+G V+Q + +F LM Y I P KHY+CMV
Sbjct: 457 ALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMV 516
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D LGRAG L+EA + I+SMP PD+ +WG+LL ACR HGN+EM K A++ + ELD
Sbjct: 517 DMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVG 576
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL--HPKA 483
YVLMSN+YA +++ R L++ ++K PG S +EV G V F +G + HP+
Sbjct: 577 YYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQH 636
Query: 484 PEVYLLLNDL 493
E+ L+DL
Sbjct: 637 EEIQRGLHDL 646
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 171/380 (45%), Gaps = 39/380 (10%)
Query: 46 QIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTS-PIQPQRLTYPSLFKAYAQLGLA 104
++ P L + N++I FS+++ PR A+ L +L + P++P T+P L +A A
Sbjct: 26 HLQVPPLLLVNSLIAAFSRAALPRLALPLLRRLLAGAHPLRPDSFTFPPLVRAAPGPASA 85
Query: 105 RDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIG 164
AQLH ++ GL ++ N V A S++
Sbjct: 86 ---AQLHACALRLGL------------LHPN-------------------VFASGSLVHA 111
Query: 165 LAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
+ G + E+ R+FD+M R+ +WN+M+SG RN + +A+ L M + + T+
Sbjct: 112 YLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTL 171
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
S+L C LG +H + V + V A+ID+Y K G A VF +
Sbjct: 172 SSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMAL 231
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
+ L WNS++ G A++LF G+ S + PD ++ +++ +A G AK
Sbjct: 232 RDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSV 291
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ I + MVD + ++ A+K+ ++P D D + W +L++ ++G
Sbjct: 292 HCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLP-DRDVVSWNTLITGYMQNG 350
Query: 405 NIEMAKQAAKQIIELDKNES 424
+A +A + ++ +E
Sbjct: 351 ---LANEAIRIYNDMHNHEG 367
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/496 (33%), Positives = 267/496 (53%), Gaps = 35/496 (7%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + +K GLA+ + +++ S GD++ A +F ++ P+L +N +I G+S +
Sbjct: 234 VHGYGVKCGLAEHEHVVTGLMSL-YSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNG 292
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
+++ LF + L S +P T ++ Y+ G LH VVK L+ D +
Sbjct: 293 MVESSVELFKE-LTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVS 351
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
+ +Y + +++ +R +FD M+ +
Sbjct: 352 TALTTLYC--------------------------------RLNDMESARSIFDAMLEKTM 379
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
SWN+MISGY +N + A+ LF+ MQE N++P+ T+ S L+ACA LGA+ G+W+H
Sbjct: 380 ESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRI 439
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ ELN V+TA+IDMY KCG A +F+ + K + WN+M+ G ++G EA
Sbjct: 440 ISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEA 499
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+KL+ + + + P +F++V+ AC+H G V++ + F +MT Y+I P I+H +CMVD
Sbjct: 500 LKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVD 559
Query: 367 ALGRAGLLEEAEKLIRSMP-SDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
LGRAG L EA +LI P S +WG+LL AC H N ++AK A++++ ELD +
Sbjct: 560 LLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAG 619
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL+SNLY + + EA R K K+ K PGC+LIE+ H F+AG LHP++
Sbjct: 620 YYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEA 679
Query: 486 VYLLLNDLGLLIQEMG 501
+Y L L + E G
Sbjct: 680 IYSYLERLTAKMIEAG 695
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 194/416 (46%), Gaps = 43/416 (10%)
Query: 5 KKIHAHLIKTGLAKDPIAASRI--LAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+ +H + G A D AS + L F S D A VF + P+ +WNT++ G
Sbjct: 134 RTLHGLSVAAGYAADTFVASALAKLYFKLSRGDD---ARKVFDTVPSPDTILWNTLLAGL 190
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
S A+ F+ M+ ++P T S +A A+ G +HG VK GL
Sbjct: 191 PGS----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEH 246
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ + ++ +Y+ CG + A+ +FD +D D+VA+N++I
Sbjct: 247 EHVVTGLMSLYSKCGDMDSAQFLFDRMDNP-DLVAYNALI-------------------- 285
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
SGY N + ++ELF+E+ +P+ T+V+++ + G
Sbjct: 286 -----------SGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARC 334
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
+H F+V + + +V TA+ +YC+ E A +F+ + +K + WN+M+ G A NG
Sbjct: 335 LHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGL 394
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
A+ LF +Q N++P+ I+ + L+AC H G ++ K ++++ K++ ++ +
Sbjct: 395 TEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKE-KLELNVYVMT 453
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
++D + G + EA + M + + + W +++S HG A + K +++
Sbjct: 454 ALIDMYAKCGSIAEARSIFDRM-DNKNVVSWNAMISGYGLHGQGAEALKLYKDMLD 508
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 188/466 (40%), Gaps = 86/466 (18%)
Query: 17 AKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFI 76
A DP A+ +L S ++ +F P+ F+ N ++R L
Sbjct: 50 ALDPAPATALLLRYASLRAPPSHLLRLFRAFPCPDRFLRNALLRSLPS---------LRP 100
Query: 77 DMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA---QLHGRVVKQGLEFDQFIHNTIIYMY 133
+L SP + + + + D A LHG V G D F+ + +
Sbjct: 101 HLLFPSP-DSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASAL---- 155
Query: 134 ANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMI 193
A+L F K D++R++FD + S +T+ WN+++
Sbjct: 156 --------AKLYF--------------------KLSRGDDARKVFDTVPSPDTILWNTLL 187
Query: 194 SGYVRNVKFKEALELF-REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCF 252
+G + EALE F R + ++P T+ S L A A+ + G +H + V
Sbjct: 188 AG----LPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGL 243
Query: 253 ELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG 312
+ VVT ++ +Y KCG + A +F+ + L +N+++ G ++NG +++LF
Sbjct: 244 AEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKE 303
Query: 313 LQSSNLKPDYISFIAV-----------LTACNHSGKVNQAKD----YFTLMTETY----- 352
L +S +P+ + +AV L C H+ V D T +T Y
Sbjct: 304 LTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLND 363
Query: 353 ----------KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS---DPDAIIWGSLLSA 399
++ +++ ++ M+ + GL E A L + M P+ I S LSA
Sbjct: 364 MESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSA 423
Query: 400 CRKHGNIEMAKQAAKQIIELDKNESCGYVLMS--NLYAASYQFEEA 443
C G + + K +II +K E YV+ + ++YA EA
Sbjct: 424 CAHLGALSLGKW-VHRIISKEKLELNVYVMTALIDMYAKCGSIAEA 468
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 264/482 (54%), Gaps = 43/482 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKK--PNLFIWNTII 59
+ HA +K LA D + ++ + C PA A LV + ++ WNTII
Sbjct: 25 SQFHALSLKLSLASDSFVLNALINMYSSCNYPAS----ARLVLDSAPRWASDVVSWNTII 80
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G+ + P A+ F M ++ +T ++ A A+ G + G+ H VV G
Sbjct: 81 AGYIRGGMPNKALQSFHQM-AKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGF 139
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E + +I ++++ MYA KCG ++E+RR+F+
Sbjct: 140 EINCYIGSSLVSMYA--------------------------------KCGMVEEARRVFN 167
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M RN V W SMI+G ++ +FKEA++LFR+MQ +K + T+ +++++C ++GA+
Sbjct: 168 RMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDL 227
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G ++H + + V ++IDMY KCG +A Q+F+ + K+ + W M+ G AM
Sbjct: 228 GRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAM 287
Query: 300 NGYENEAIKLFSGLQSSN-LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
NG EA+ LF+ ++ + + P+ + F+ VLTAC+H G V Q +F M++ Y + P I
Sbjct: 288 NGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRI 347
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD LGRA LL EAE+ I+ MP PD ++W SLL ACR G + +A+ AA++I +
Sbjct: 348 EHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQ 407
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ G+VL+SN+YA + ++ + R M + K+PGCS IEVDG +HEF AG
Sbjct: 408 LEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDE 467
Query: 479 LH 480
H
Sbjct: 468 SH 469
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 144/288 (50%), Gaps = 34/288 (11%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT-EFDVVAWNSMIIGL 165
G+Q H +K L D F+ N +I MY++C + + ARL+ D DVV+WN
Sbjct: 24 GSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWN------ 77
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 225
++I+GY+R +AL+ F +M ++ ++ E T++
Sbjct: 78 -------------------------TIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLL 112
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
++L ACA+ GA++ G H +V N FE+N + ++++ MY KCG E A +VFN +P++
Sbjct: 113 NVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPER 172
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
+ CW SM+ G +G EA+ LF +Q + +K D + V+++C G ++ + Y
Sbjct: 173 NVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGR-YL 231
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
+ + + + + ++D + G + +A ++ + + D W
Sbjct: 232 HAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGL-TKRDVFTW 278
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 275/496 (55%), Gaps = 34/496 (6%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH + IK GL D + ++ + G++ A +F Q+K ++ WN+++ F Q+
Sbjct: 262 IHVYAIKLGLEFDLFVCNALINM-YAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNK 320
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
P A+ ++ M + P LT SL A+LG +HG V ++
Sbjct: 321 KPVIALGVYNKMHSIGVV-PDLLTLVSLASVAAELGNFLSSRSIHGFVTRR--------- 370
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
C FL D+ N++I AK G ID +R++F+ + ++
Sbjct: 371 ---------CWFLH-------------DIALGNAIIDMYAKLGFIDSARKVFEGLPVKDV 408
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQE-QNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
+SWNS+I+GY +N EA++++ M+ P++ T VS+L A ++LGA++QG H
Sbjct: 409 ISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHG 468
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
L+ N + V T ++DMY KCG AL +F VP + WN+++ ++GY +
Sbjct: 469 QLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLK 528
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+KLF +QS +KPD+I+F+++L+AC+HSG V++ + F LM ETY I+PS+KHY CMV
Sbjct: 529 AVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMV 588
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D GRAG LE+A +++MP PD +WG+LL ACR H N+E+ + + +++++
Sbjct: 589 DLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVG 648
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
YVL+SN+YA +E E R L ++ ++K PG S IEVD ++ F G + HPK E
Sbjct: 649 YYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEE 708
Query: 486 VYLLLNDLGLLIQEMG 501
+Y L +L ++ +G
Sbjct: 709 IYSELRNLTAKMKSIG 724
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 191/403 (47%), Gaps = 43/403 (10%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K++HA L+ +G + +++++ AF GDI +A L F QI+ +++ WN++I
Sbjct: 60 KQLHALLVVSGKTQSIFLSAKLINRYAFL----GDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+++ A+ F + L TS +Q T+P + +A L DG ++H V+K G E
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLD---DGRKVHCLVLKLGFEC 172
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
D +I + I+ Y+ GF+S A C LFD M
Sbjct: 173 DVYIAASFIHFYSRFGFVSLA-------------------------C-------NLFDNM 200
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
+ R+ +WN+MISG+ N K EALE+F EM+ +++ T+ SLL C +L I G
Sbjct: 201 MIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGV 260
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
IH + + E + V A+I+MY K G A +FN + + + WNS++ N
Sbjct: 261 LIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNK 320
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
A+ +++ + S + PD ++ +++ + G ++ +T I
Sbjct: 321 KPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALG 380
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ ++D + G ++ A K+ +P D I W SL++ ++G
Sbjct: 381 NAIIDMYAKLGFIDSARKVFEGLPV-KDVISWNSLITGYSQNG 422
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 140/300 (46%), Gaps = 50/300 (16%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ IH + + IA + + G I+ A VF + ++ WN++I G+SQ
Sbjct: 361 RSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQ 420
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ AI ++ M S P + T+ S+ A++QLG + G + HG+++K L FD F
Sbjct: 421 NGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIF 480
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MY CG L++A +F EV +
Sbjct: 481 VSTCLVDMYGKCGKLADALSLFYEVPHQ-------------------------------- 508
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
++VSWN++IS + + +A++LF+EMQ + +KP T VSLL+AC+ G + +G+W
Sbjct: 509 SSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQW-- 566
Query: 245 NFLVTNCFEL---------NTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMV 294
CF+L + ++D++ + G E+A +P + +S W +++
Sbjct: 567 ------CFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALL 620
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 267/497 (53%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH + ++GL D + ++ G + A VF ++ ++ W +I G +
Sbjct: 552 KQIHGRITESGLQLDVNLGNALINMYIR-CGSLQDARNVFHSLQHRDVMSWTAMIGGCAD 610
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
AI LF M +P + T+ S+ K +G ++ ++ G E D
Sbjct: 611 QGEDMKAIELFWQMQ-NEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTG 669
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N +I Y+ K G + ++R +FDKM SR
Sbjct: 670 VGNALISAYS--------------------------------KSGSMTDAREVFDKMPSR 697
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSWN +I+GY +N + A+E +MQEQ++ P++F+ VSLLNAC+ A+ +G+ +H
Sbjct: 698 DIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVH 757
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+V + + V A+I MY KCG A +VF+ + +K + WN+M+ A +G +
Sbjct: 758 AEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLAS 817
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A+ F+ ++ +KPD +F ++L+ACNH+G V + F+ M Y + P+I+HY C+
Sbjct: 818 KALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCL 877
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
V LGRA +EAE LI MP PDA +W +LL ACR HGNI +A+ AA ++L+
Sbjct: 878 VGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNP 937
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
Y+L+SN+YAA+ ++++ + R +M+ I KEPG S IEVD +HEF+A R HP+
Sbjct: 938 AVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETA 997
Query: 485 EVYLLLNDLGLLIQEMG 501
E+Y L L + ++E G
Sbjct: 998 EIYAELKRLSVEMEEAG 1014
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 209/417 (50%), Gaps = 38/417 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K IH+H+ + G + D + +++ + GD+ A +F + K +L WN II G+++
Sbjct: 350 KLIHSHISEDGHSSDVQIGNALISM-YARCGDLPKARELFYTMPKRDLISWNAIIAGYAR 408
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A+ L+ M + ++P R+T+ L A A DG +H +++ G++ +
Sbjct: 409 REDRGEAMRLYKQMQ-SEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGH 467
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MY +CG + E++ +F+ +R
Sbjct: 468 LANALMNMYR--------------------------------RCGSLMEAQNVFEGTQAR 495
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SWNSMI+G+ ++ ++ A +LF+EMQ + ++P T S+L+ C A+ G+ IH
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH 555
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + +L+ + A+I+MY +CG + A VF+++ + + W +M+ G A G +
Sbjct: 556 GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDM 615
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT-LMTETYKIKPSIKHYSC 363
+AI+LF +Q+ +P +F ++L C S +++ K ++ Y++ + +
Sbjct: 616 KAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVG--NA 673
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
++ A ++G + +A ++ MPS D + W +++ ++G + A + A Q+ E D
Sbjct: 674 LISAYSKSGSMTDAREVFDKMPSR-DIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQD 729
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 183/400 (45%), Gaps = 36/400 (9%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH ++ GL D + ++ C GD++ A F ++ ++N +I +Q
Sbjct: 249 KRIHKLTVEEGLNSDIRVGTALVTMCVR-CGDVDSAKQAFKGTADRDVVVYNALIAALAQ 307
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
A + M + + R TY S+ A + G +H + + G D
Sbjct: 308 HGHNVEAFEQYYRMR-SDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQ 366
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I N +I MYA +CG++ ++R LF M R
Sbjct: 367 IGNALISMYA--------------------------------RCGDLPKARELFYTMPKR 394
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SWN++I+GY R EA+ L+++MQ + +KP T + LL+ACA A G+ IH
Sbjct: 395 DLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIH 454
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ + + N + A+++MY +CG A VF + + WNSM+ G A +G
Sbjct: 455 EDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYE 514
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A KLF +Q+ L+PD I+F +VL+ C + + K +TE+ ++ + + +
Sbjct: 515 TAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNAL 573
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
++ R G L++A + S+ D + W +++ C G
Sbjct: 574 INMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGGCADQG 612
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 198/413 (47%), Gaps = 44/413 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+++ KKIH+ +IK G +DP + +L+ GD+ A VF I ++ +NT++
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSM-YGKCGDLPRARQVFAGISPRDVVSYNTMLG 202
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
++Q + + + LF M + I P ++TY +L A+ + +G ++H V++GL
Sbjct: 203 LYAQKAYVKECLGLFGQM-SSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + ++ M +CG++D +++ F
Sbjct: 262 SDIRVGTALVTM--------------------------------CVRCGDVDSAKQAFKG 289
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
R+ V +N++I+ ++ EA E + M+ + + T +S+LNAC+ A+ G
Sbjct: 290 TADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG 349
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ IH+ + + + + A+I MY +CG +A ++F T+PK+ L WN+++ G A
Sbjct: 350 KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARR 409
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
EA++L+ +QS +KP ++F+ +L+AC +S K M ++ IK
Sbjct: 410 EDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGK-----MIHEDILRSGIKS 464
Query: 361 YSCMVDAL----GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ +AL R G L EA+ + + D I W S+++ +HG+ E A
Sbjct: 465 NGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYETA 516
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 159/330 (48%), Gaps = 35/330 (10%)
Query: 83 PIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEA 142
P + +R TY +L + + L + ++H ++V+ + D F+ N +I MY
Sbjct: 22 PTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYV-------- 73
Query: 143 RLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKF 202
KC + ++ ++F +M R+ +SWNS+IS Y +
Sbjct: 74 ------------------------KCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFK 109
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAI 262
K+A +LF EMQ P++ T +S+L AC + G+ IH+ ++ ++ + V ++
Sbjct: 110 KKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSL 169
Query: 263 IDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDY 322
+ MY KCG RA QVF + + + +N+M+ A Y E + LF + S + PD
Sbjct: 170 LSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDK 229
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
+++I +L A +++ K L E + I+ + +V R G ++ A++ +
Sbjct: 230 VTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNSDIRVGTALVTMCVRCGDVDSAKQAFK 288
Query: 383 SMPSDPDAIIWGSLLSACRKHG-NIEMAKQ 411
+D D +++ +L++A +HG N+E +Q
Sbjct: 289 GT-ADRDVVVYNALIAALAQHGHNVEAFEQ 317
>gi|223948849|gb|ACN28508.1| unknown [Zea mays]
gi|413937254|gb|AFW71805.1| hypothetical protein ZEAMMB73_337002 [Zea mays]
Length = 608
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 290/532 (54%), Gaps = 45/532 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTS---PAGDI------------NYAYLVFTQIKK 49
+ +HAHL+KT L + ++R++A +S PA + +Y L+ +++
Sbjct: 52 RAVHAHLVKTALTSHTLLSNRLVALYSSLPSPAAAVKAFYDLPHKNAHSYNTLLAALLRR 111
Query: 50 P------------------NLFIWNTIIRGFS----QSSTPRNAILLFIDMLVTSPIQPQ 87
P NL +NT++ + Q R L D + +
Sbjct: 112 PDTLPDAFRLFDTMPADSRNLVSYNTLMSSLAHHGRQVEALRVVARLARDRFLGPGLAMD 171
Query: 88 RLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFD 147
R T S+ A A +G AR ++HG VV G+EF + N ++ Y+ + +AR +FD
Sbjct: 172 RFTVVSVATACAGIGAARPLREMHGAVVVSGMEFTVIMANAMLNAYSKARRVEDARHLFD 231
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
+V D V W SMI G + ++ E+ ++FD M ++ ++W ++ISG+ +N + ALE
Sbjct: 232 QVSIR-DNVTWTSMISGYCQVKKLHEAVQVFDMMPDKDRIAWTALISGHEQNGEEDTALE 290
Query: 208 LFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV---TNCFELNTIVVTAIID 264
LF +M + + P+ F +VS L ACAKLG + +G+ +H F++ N + A++D
Sbjct: 291 LFEQMLAKGVSPTPFVLVSALGACAKLGLVTRGKELHCFILRRNIGSVPFNIFIHNALVD 350
Query: 265 MYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
MY KCG A+ VF+ +P++ WNSMV G + NG +++ +F + + ++P +++
Sbjct: 351 MYSKCGDMMAAMAVFDWMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVT 410
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSM 384
F+AVLTAC+HSG V+ + M E + ++P +HY+ +DALGR LEEA + I+ +
Sbjct: 411 FLAVLTACSHSGLVSNGRLVLESM-EDHGVEPRAEHYAAFIDALGRNHQLEEATEFIKDL 469
Query: 385 PS---DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
PS A WG+LL ACR HGNIE+A++ A+ + L+ S YV+MSN+YAA+ Q++
Sbjct: 470 PSRIGPGTAGSWGALLGACRLHGNIELAEEVAEFLFRLEPGNSGRYVMMSNIYAAAGQWD 529
Query: 442 EAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+A R LMKE ++K+ S IEV H FVA H +A ++Y +L L
Sbjct: 530 DARRVRGLMKEKGLKKDQAYSWIEVRSAKHVFVADDISHCEADKIYEMLGKL 581
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 264/482 (54%), Gaps = 43/482 (8%)
Query: 5 KKIHAHLIKTGLAKDPIAASRIL---AFCTSPAGDINYAYLVFTQIKK--PNLFIWNTII 59
+ HA +K LA D + ++ + C PA A LV + ++ WNTII
Sbjct: 113 SQFHALSLKLSLASDSFVLNALINMYSSCNYPAS----ARLVLDSAPRWASDVVSWNTII 168
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G+ + P A+ F M ++ +T ++ A A+ G + G+ H VV G
Sbjct: 169 AGYIRGGMPNKALQSFHQM-AKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVVLNGF 227
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E + +I ++++ MYA KCG ++E+RR+F+
Sbjct: 228 EINCYIGSSLVSMYA--------------------------------KCGMVEEARRVFN 255
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M RN V W SMI+G ++ +FKEA++LFR+MQ +K + T+ +++++C ++GA+
Sbjct: 256 RMPERNVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDL 315
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G ++H + + V ++IDMY KCG +A Q+F+ + K+ + W M+ G AM
Sbjct: 316 GRYLHAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAM 375
Query: 300 NGYENEAIKLFSGLQSSN-LKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
NG EA+ LF+ ++ + + P+ + F+ VLTAC+H G V Q +F M++ Y + P I
Sbjct: 376 NGLCVEALDLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRI 435
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CMVD LGRA LL EAE+ I+ MP PD ++W SLL ACR G + +A+ AA++I +
Sbjct: 436 EHYGCMVDLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQ 495
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
L+ G+VL+SN+YA + ++ + R M + K+PGCS IEVDG +HEF AG
Sbjct: 496 LEPKRCGGHVLLSNVYATTLRWVDVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDE 555
Query: 479 LH 480
H
Sbjct: 556 SH 557
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 144/288 (50%), Gaps = 34/288 (11%)
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT-EFDVVAWNSMIIGL 165
G+Q H +K L D F+ N +I MY++C + + ARL+ D DVV+WN
Sbjct: 112 GSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWASDVVSWN------ 165
Query: 166 AKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMV 225
++I+GY+R +AL+ F +M ++ ++ E T++
Sbjct: 166 -------------------------TIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLL 200
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
++L ACA+ GA++ G H +V N FE+N + ++++ MY KCG E A +VFN +P++
Sbjct: 201 NVLVACARTGAMKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPER 260
Query: 286 GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF 345
+ CW SM+ G +G EA+ LF +Q + +K D + V+++C G ++ + Y
Sbjct: 261 NVVCWTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGR-YL 319
Query: 346 TLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIW 393
+ + + + + ++D + G + +A ++ + + D W
Sbjct: 320 HAYCDGHGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGL-TKRDVFTW 366
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/505 (32%), Positives = 276/505 (54%), Gaps = 40/505 (7%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
++KKIH L K GL D S ++ C G + +A + F ++ ++ +WN ++ G+
Sbjct: 154 EIKKIHGLLFKFGLELDVFIGSALVN-CYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGY 212
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+Q + F M S + P R T + +A +G +G +HG +K G +
Sbjct: 213 AQIGQFEMVLETFRRMNDESVV-PSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSG 271
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ N++I MY C + +A +F E+ E D+ +WNS++ +CG+ D + RL D+M+
Sbjct: 272 VAVSNSLIDMYGKCKCIEDALEIF-EMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRML 330
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
I+P T+ ++L AC+ L A+ G
Sbjct: 331 G-------------------------------AGIQPDLVTVTTVLPACSHLAALMHGRE 359
Query: 243 IHNFLVTNCF-----ELNTIVV-TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
IH +++ + +++ +++ A+IDMY KCG A VF + K ++ WN M+ G
Sbjct: 360 IHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMG 419
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
M+GY NEA+++FS + LKPD ++F+ VL+AC+H+G V+Q +++ M Y + P
Sbjct: 420 YGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAP 479
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+I+HY+C++D LGRAG L+EA +L +MP + + ++W +LL+ACR H + +A+ AA+++
Sbjct: 480 TIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRV 539
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
EL+ YVLMSN+Y A ++EE +E R M++ + K PGCS IE+ VH FV+
Sbjct: 540 FELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSA 599
Query: 477 GRLHPKAPEVYLLLNDLGLLIQEMG 501
R HP+A +Y LN L ++E G
Sbjct: 600 DRAHPEAHSIYAGLNSLTARLREHG 624
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 99/195 (50%), Gaps = 6/195 (3%)
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T ++ L A A + +G+ IH++++ N F + + +T++I+MY KC AL +F+
Sbjct: 39 TCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDP 98
Query: 283 PKK-GLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
+ + +N+++ G NG+ E + + +++ + PD +F + AC V +
Sbjct: 99 THEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACL---DVLEI 155
Query: 342 KDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACR 401
K L+ + + ++ + S +V+ + GL+E A+ +P D ++W ++++
Sbjct: 156 KKIHGLLFK-FGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR-DVVLWNAMVNGYA 213
Query: 402 KHGNIEMAKQAAKQI 416
+ G EM + +++
Sbjct: 214 QIGQFEMVLETFRRM 228
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 260/482 (53%), Gaps = 34/482 (7%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA + GL D + +L G IN A +F + ++ W +I ++Q
Sbjct: 149 KEVHACIRHGGLESDVRVGTALLRM-YGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQ 207
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S + A L + M +P +TY S+ A A G + ++H + GLE D
Sbjct: 208 SGNGKEAYRLMLQM-EQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVR 266
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA K G ID++R +FD+M R
Sbjct: 267 VGTALVQMYA--------------------------------KSGSIDDARVVFDRMKVR 294
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ VSWN MI + + + EA +LF +MQ + KP +S+LNACA GA+ + IH
Sbjct: 295 DVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIH 354
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+ + E++ V TA++ MY K G + A VF+ + + + WN+M+ GLA +G
Sbjct: 355 RHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQ 414
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A+++F + + +KPD ++F+AVL+AC+H+G V++ + + MT+ Y I+P + H +CM
Sbjct: 415 DALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCM 474
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L EA+ I +M DPD WG+LL +CR +GN+E+ + AK+ ++LD +
Sbjct: 475 VDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNA 534
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+SN+YA + +++ R +M+E I KEPG S IEVD ++H+F+ HP+
Sbjct: 535 ATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECK 594
Query: 485 EV 486
E+
Sbjct: 595 EI 596
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 139/540 (25%), Positives = 240/540 (44%), Gaps = 86/540 (15%)
Query: 2 KDL---KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTI 58
KDL K++H +IK+ + ++ + +L G + A VF + K + WN +
Sbjct: 42 KDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIE-CGRLQEARCVFDALVKKSGASWNAM 100
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
I G+ + +A+ LF +M +QP TY + KA A L + G ++H + G
Sbjct: 101 IAGYVEHKHAEDAMRLFREM-CHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGG 159
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
LE D + ++ MY KCG I+E+RR+F
Sbjct: 160 LESDVRVGTALLRMYG--------------------------------KCGSINEARRIF 187
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D +++ + +SW MI Y ++ KEA L +M+++ KP+ T VS+LNACA GA++
Sbjct: 188 DNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALK 247
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+ +H + EL+ V TA++ MY K G + A VF+ + + + WN M+ A
Sbjct: 248 WVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFA 307
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYF------------- 345
+G +EA LF +Q+ KPD I F+++L AC +G + K
Sbjct: 308 EHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVR 367
Query: 346 --TLMTETYKIKPSIKH---------------YSCMVDALGRAGLLEEAEKLIRSMPS-- 386
T + Y SI ++ M+ L + GL ++A ++ R M +
Sbjct: 368 VGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHG 427
Query: 387 -DPDAIIWGSLLSACRKHGNIEMAKQ---AAKQIIELDKNESCGYVLMSNLYAASYQFEE 442
PD + + ++LSAC G ++ + A Q+ ++ + S ++ L A
Sbjct: 428 VKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAG----R 483
Query: 443 AMEERLLMKEVKIEKEP-------GCSLIEVDGEVHEFVAGGRLH--PKAPEVYLLLNDL 493
ME +L + + ++ + G + E+ E VA RL PK Y+LL+++
Sbjct: 484 LMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNI 543
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 67/338 (19%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K +K++H H + GL D + L + +G I+ A +VF ++K ++ WN +I
Sbjct: 246 LKWVKRVHRHALDAGLELD-VRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIG 304
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
F++ A LF+ M T +P + + S+ A A G ++H + GLE
Sbjct: 305 AFAEHGRGHEAYDLFLQMQ-TEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLE 363
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D + +++MY+ G + +AR++FD + +VV+WN+MI GLA+ G
Sbjct: 364 VDVRVGTALVHMYSKSGSIDDARVVFDRMKVR-NVVSWNAMISGLAQHG----------- 411
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
++ALE+FR M +KP T V++L+AC+ G + +G
Sbjct: 412 --------------------LGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEG 451
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+L QV+ P +S N MV L
Sbjct: 452 R--SQYLAMT--------------------------QVYGIEPD--VSHCNCMVDLLGRA 481
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV 338
G EA KLF + + + PD ++ A+L +C G V
Sbjct: 482 GRLMEA-KLF--IDNMAVDPDEATWGALLGSCRTYGNV 516
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+KKIH H + +GL D + L S +G I+ A +VF ++K N+ WN +I G +
Sbjct: 350 VKKIHRHALDSGLEVD-VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLA 408
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG-AQLHGRVVKQGLEFD 122
Q ++A+ +F M ++P R+T+ ++ A + GL +G +Q G+E D
Sbjct: 409 QHGLGQDALEVFRRM-TAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPD 467
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI-----IGLAKCGEIDESRRL 177
N ++ + G L EA+L D + + D W +++ G + GE+ RL
Sbjct: 468 VSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERL 527
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI-KPSEFTMVSLLNACAKLGA 236
K+ +N ++ + + Y K+ + M+E+ I K + + + N
Sbjct: 528 --KLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNK------ 579
Query: 237 IRQGEWIHNFLVTN-----CFELN 255
IH+FLV + C E+N
Sbjct: 580 ------IHDFLVADSSHPECKEIN 597
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 147/333 (44%), Gaps = 55/333 (16%)
Query: 202 FKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTA 261
EA+ + ++ + F V +L C K + + +H+ ++ + E N V+
Sbjct: 9 LSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
++ +Y +CG + A VF+ + KK + WN+M+ G + + +A++LF + ++P+
Sbjct: 69 LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128
Query: 322 YISFIAVLTAC-----------------------------------NHSGKVNQAKDYFT 346
+++ +L AC G +N+A+ F
Sbjct: 129 AGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFD 188
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD---PDAIIWGSLLSACRKH 403
+ + I ++ M+ A ++G +EA +L+ M + P+AI + S+L+AC
Sbjct: 189 NL-----MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASE 243
Query: 404 GNIEMAKQAAKQIIE--LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGC 461
G ++ K+ + ++ L+ + G L+ +YA S ++A R++ +K+
Sbjct: 244 GALKWVKRVHRHALDAGLELDVRVGTALV-QMYAKSGSIDDA---RVVFDRMKVR----- 294
Query: 462 SLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLG 494
++ + + F GR H +A +++L + G
Sbjct: 295 DVVSWNVMIGAFAEHGRGH-EAYDLFLQMQTEG 326
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 264/497 (53%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH +K GL ++ L + G ++ A F N W+ +I G++Q
Sbjct: 229 KQIHCIAVKNGLL-SIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQ 287
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S A+ LF M + S I+P T+ + A + LG A +G Q+H ++K G E +
Sbjct: 288 SGDSDKALKLFSSMHL-SGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIY 346
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ ++ MYA KC I ++R+ FD +
Sbjct: 347 VMTALVDMYA--------------------------------KCSSIVDARKGFDYLQEP 374
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V W SMI GYV+N + ++AL L+ M+ + I P+E TM S+L AC+ L A+ QG+ IH
Sbjct: 375 DIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIH 434
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
V F L + +A+ MY KCGC + VF +P + + WN+M+ GL+ NG
Sbjct: 435 ARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGK 494
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EA++LF +Q KPDY++F+ +L+AC+H G V + YF +M + + + P ++HY+CM
Sbjct: 495 EALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACM 554
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD L RAG L+EA + S D +W +L ACR + N E+ A ++++EL ES
Sbjct: 555 VDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQES 614
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
YVL+S++Y+A ++E+ R +MK + KEPGCS IE+ VH FV ++HP+
Sbjct: 615 SAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIG 674
Query: 485 EVYLLLNDLGLLIQEMG 501
++++ L L +++ G
Sbjct: 675 DIHVELRQLSKQMKDEG 691
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 181/398 (45%), Gaps = 38/398 (9%)
Query: 8 HAHLIKTGLAKDPIAASRIL-AFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
HA IK +D S ++ +C AG A VF + + N W T+I G++
Sbjct: 131 HAVAIKMDSCRDVFVGSSLMNMYC--KAGLTPEARKVFDTMPERNSVSWATMISGYASQK 188
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
A+ LF ++ + S+ A L +G Q+H VK GL +
Sbjct: 189 LAAEALGLF-RLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVG 247
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
N ++ MYA CG L +A F E ++ + + W++MI G A+ G+ D
Sbjct: 248 NALVTMYAKCGSLDDALQTF-ETSSDKNSITWSAMITGYAQSGDSD-------------- 292
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
+AL+LF M I+PSEFT V ++NAC+ LGA +G+ +H++
Sbjct: 293 -----------------KALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDY 335
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
L+ FE V+TA++DMY KC A + F+ + + + W SM+ G NG +A
Sbjct: 336 LLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDA 395
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
+ L+ ++ + P+ ++ +VL AC+ + Q K T Y + S +
Sbjct: 396 LSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHA-RTVKYGFGLEVPIGSALST 454
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ G L++ + R MP+ D I W +++S ++G
Sbjct: 455 MYAKCGCLKDGTLVFRRMPAR-DVISWNAMISGLSQNG 491
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 181/409 (44%), Gaps = 43/409 (10%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K +HA +IK+ + IA S + + + + A VF +I+ ++ WN II G+SQ
Sbjct: 26 KALHAQIIKSSSSCVYIANSLVNLY--AKCQRLREAKFVFERIQNKDVVSWNCIINGYSQ 83
Query: 65 SS-TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ + ++ + P T+ +F A + L A G H +K D
Sbjct: 84 HGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDV 143
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F+ ++++ MY G EA R++FD M
Sbjct: 144 FVGSSLMNMYCKAGLTPEA--------------------------------RKVFDTMPE 171
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
RN+VSW +MISGY EAL LFR M+ + +EF S+L+A + G+ I
Sbjct: 172 RNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQI 231
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H V N V A++ MY KCG + ALQ F T K W++M+ G A +G
Sbjct: 232 HCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDS 291
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKV---NQAKDYFTLMTETYKIKPSIKH 360
++A+KLFS + S ++P +F+ V+ AC+ G Q DY + + I
Sbjct: 292 DKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKL----GFESQIYV 347
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMA 409
+ +VD + + +A K + +PD ++W S++ ++G E A
Sbjct: 348 MTALVDMYAKCSSIVDARKGFDYL-QEPDIVLWTSMIGGYVQNGENEDA 395
>gi|125526069|gb|EAY74183.1| hypothetical protein OsI_02067 [Oryza sativa Indica Group]
Length = 657
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 257/438 (58%), Gaps = 4/438 (0%)
Query: 30 CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRL 89
C AG IN A VF I + + W T+I G+ + A+ ++ M+ T I+ +
Sbjct: 218 CYVKAGMINMAAEVFGVIPERDEVSWLTMIDGYMCADFLLQALRTYVAMVGTVGIRANEV 277
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
L KA ++ +G QLH ++K G + F+ T+I+ Y +C F+ +++ F
Sbjct: 278 ILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHSQMQFKLS 337
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
D V +WN+++ L + + E+R+LFD M R+T+SW+++ISGYV++ AL++F
Sbjct: 338 DKSH-VASWNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQIF 396
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
M + ++P+E T+ S L+A A G + Q WIH+++++ +L + +I++Y KC
Sbjct: 397 CSMLDAGVEPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAKC 456
Query: 270 GCPERALQVFNTVPKKGLSC--WNSMVFGLAMNGYENEAIKLFSGLQSS-NLKPDYISFI 326
G A+Q+FN V K +S WNS++ LA++GY N +++LFS LQS+ N+KP+ I+++
Sbjct: 457 GSIAEAVQLFNHVKDKSISVSPWNSIICNLAIHGYVNMSLELFSQLQSTTNIKPNSITYL 516
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
VL AC H+G V + K F M + Y I+P IKHY CMVD L RAG LEEAE LI++MP
Sbjct: 517 GVLNACCHAGMVAEGKRQFESMRQQYGIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMPM 576
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
D + WG +L+A R GN+ + ++AA+++ +LD + + +SNLYA + +
Sbjct: 577 KADVVAWGCILAAARTQGNVALGEKAAEELSKLDPSHGASKIALSNLYADAGHWSNVSVV 636
Query: 447 RLLMKEVKIEKEPGCSLI 464
R ++ +E+ G S I
Sbjct: 637 RKELQNENLERLTGSSGI 654
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 195/431 (45%), Gaps = 43/431 (9%)
Query: 23 ASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTS 82
A IL + AG + A + ++ + + + T+I S+S P A+ +F DML T
Sbjct: 78 AHNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSGHPERALAVFRDML-TE 136
Query: 83 PIQPQRLTYPSLFKAYA-QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSE 141
+QP +T + A A G HG V++GL+ + +++ Y +
Sbjct: 137 AVQPNEVTLAEVLTAMACDHGAPAPVGAAHGVAVRRGLDGFVIVATNLVHAYGAVSQVPS 196
Query: 142 ARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVK 201
AR +F E+ + + V WN+M+ K G I+ + +F + R+ VSW +MI GY+
Sbjct: 197 ARSIF-ELMPDRNTVTWNTMLNCYVKAGMINMAAEVFGVIPERDEVSWLTMIDGYMCADF 255
Query: 202 FKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT 260
+AL + M I+ +E +V L+ AC++ A+ +G+ +H ++ N F+ + V
Sbjct: 256 LLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHAFVQA 315
Query: 261 AIIDMYCKC-------------------------------GCPERALQVFNTVPKKGLSC 289
+I Y C A Q+F+ +P++
Sbjct: 316 TLIHYYGSCDFIDHSQMQFKLSDKSHVASWNALMASLLRRNLVHEARQLFDDMPERDTIS 375
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK---DYFT 346
W++++ G +G N A+++F + + ++P+ I+ + L+A +SG + QA+ DY
Sbjct: 376 WSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEITLASALSAVANSGTLGQARWIHDYII 435
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAII-WGSLLSACRKHGN 405
+ I+ + K + +++ + G + EA +L + ++ W S++ HG
Sbjct: 436 ----SRSIQLTDKLSAGLINVYAKCGSIAEAVQLFNHVKDKSISVSPWNSIICNLAIHGY 491
Query: 406 IEMAKQAAKQI 416
+ M+ + Q+
Sbjct: 492 VNMSLELFSQL 502
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 172/384 (44%), Gaps = 70/384 (18%)
Query: 93 SLFKAYAQLGLARDGAQLHGRVVKQGL-EFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
SL A A+L G QLH K GL + F+ N+++ Y+ S A +FDE+
Sbjct: 16 SLKSAAARLS---HGEQLHALAAKSGLLTSNLFVRNSLLAFYSRVA-PSLAYHLFDEIPP 71
Query: 152 EF-DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
D A N ++ LA+ G ++ ++ L +M R+ VS+ ++IS R+ + AL +FR
Sbjct: 72 LLRDATAHNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSGHPERALAVFR 131
Query: 211 EMQEQNIKPSEFTMVSLLNAC-------AKLG-----AIRQG---------EWIHNFLVT 249
+M + ++P+E T+ +L A A +G A+R+G +H +
Sbjct: 132 DMLTEAVQPNEVTLAEVLTAMACDHGAPAPVGAAHGVAVRRGLDGFVIVATNLVHAYGAV 191
Query: 250 -------NCFEL----NTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
+ FEL NT+ +++ Y K G A +VF +P++ W +M+ G
Sbjct: 192 SQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMINMAAEVFGVIPERDEVSWLTMIDGYM 251
Query: 299 MNGYENEAIKLFSGLQSS-NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET------ 351
+ +A++ + + + ++ + + + ++ AC+ V++ + T++ +
Sbjct: 252 CADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHA 311
Query: 352 ----------------------YKI--KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
+K+ K + ++ ++ +L R L+ EA +L MP +
Sbjct: 312 FVQATLIHYYGSCDFIDHSQMQFKLSDKSHVASWNALMASLLRRNLVHEARQLFDDMP-E 370
Query: 388 PDAIIWGSLLSACRKHGNIEMAKQ 411
D I W +L+S + GN MA Q
Sbjct: 371 RDTISWSTLISGYVQSGNSNMALQ 394
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,477,702,286
Number of Sequences: 23463169
Number of extensions: 294670916
Number of successful extensions: 860596
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9479
Number of HSP's successfully gapped in prelim test: 2608
Number of HSP's that attempted gapping in prelim test: 669537
Number of HSP's gapped (non-prelim): 52909
length of query: 502
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 355
effective length of database: 8,910,109,524
effective search space: 3163088881020
effective search space used: 3163088881020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)