BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046039
(502 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/494 (63%), Positives = 391/494 (79%), Gaps = 2/494 (0%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M++LK+IHA LIKTGL D + ASR+LAFC + D+NYAYLVFT+I N F+WNTIIR
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIR 97
Query: 61 GFSQSSTPRNAILLFIDMLVTSP-IQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
GFS+SS P AI +FIDML +SP ++PQRLTYPS+FKAY +LG ARDG QLHG V+K+GL
Sbjct: 98 GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL 157
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D FI NT+++MY CG L EA +F + FDVVAWNSMI+G AKCG ID+++ LFD
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLIEAWRIFLGM-IGFDVVAWNSMIMGFAKCGLIDQAQNLFD 216
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M RN VSWNSMISG+VRN +FK+AL++FREMQE+++KP FTMVSLLNACA LGA Q
Sbjct: 217 EMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G WIH ++V N FELN+IVVTA+IDMYCKCGC E L VF PKK LSCWNSM+ GLA
Sbjct: 277 GRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG+E A+ LFS L+ S L+PD +SFI VLTAC HSG+V++A ++F LM E Y I+PSIK
Sbjct: 337 NGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY+ MV+ LG AGLLEEAE LI++MP + D +IW SLLSACRK GN+EMAK+AAK + +L
Sbjct: 397 HYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKL 456
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D +E+CGYVL+SN YA+ FEEA+E+RLLMKE ++EKE GCS IEVD EVHEF++ G
Sbjct: 457 DPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGT 516
Query: 480 HPKAPEVYLLLNDL 493
HPK+ E+Y LL+ L
Sbjct: 517 HPKSAEIYSLLDIL 530
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 210/508 (41%), Positives = 329/508 (64%), Gaps = 18/508 (3%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSP---AGDINYAYLVFTQIKKPNLFIWNT 57
++DL +IHA IK+G +D +AA+ IL FC + D++YA+ +F Q+ + N F WNT
Sbjct: 36 IRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNT 95
Query: 58 IIRGFSQSSTPRN--AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVV 115
IIRGFS+S + AI LF +M+ ++P R T+PS+ KA A+ G ++G Q+HG +
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLAL 155
Query: 116 KQGLEFDQFIHNTIIYMYANCGFLSEARLMF-------------DEVDTEFDVVAWNSMI 162
K G D+F+ + ++ MY CGF+ +AR++F D + ++V WN MI
Sbjct: 156 KYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMI 215
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
G + G+ +R LFDKM R+ VSWN+MISGY N FK+A+E+FREM++ +I+P+
Sbjct: 216 DGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYV 275
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTV 282
T+VS+L A ++LG++ GEW+H + + ++ ++ +A+IDMY KCG E+A+ VF +
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 283 PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAK 342
P++ + W++M+ G A++G +AI F ++ + ++P +++I +LTAC+H G V + +
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 343 DYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRK 402
YF+ M ++P I+HY CMVD LGR+GLL+EAE+ I +MP PD +IW +LL ACR
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRM 455
Query: 403 HGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS 462
GN+EM K+ A ++++ ++S YV +SN+YA+ + E E RL MKE I K+PGCS
Sbjct: 456 QGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 515
Query: 463 LIEVDGEVHEFVAGGRLHPKAPEVYLLL 490
LI++DG +HEFV HPKA E+ +L
Sbjct: 516 LIDIDGVLHEFVVEDDSHPKAKEINSML 543
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/487 (42%), Positives = 310/487 (63%), Gaps = 4/487 (0%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD--INYAYLVFTQIKKPNLFIWNTII 59
++LK+IHA ++KTGL +D A ++ L+FC S + YA +VF +P+ F+WN +I
Sbjct: 28 EELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMI 87
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGFS S P ++LL+ ML +S T+PSL KA + L + Q+H ++ K G
Sbjct: 88 RGFSCSDEPERSLLLYQRMLCSSAPH-NAYTFPSLLKACSNLSAFEETTQIHAQITKLGY 146
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E D + N++I YA G A L+FD + E D V+WNS+I G K G++D + LF
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKLAHLLFDRI-PEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
KM +N +SW +MISGYV+ KEAL+LF EMQ +++P ++ + L+ACA+LGA+ Q
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+WIH++L +++++ +IDMY KCG E AL+VF + KK + W +++ G A
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
+G+ EAI F +Q +KP+ I+F AVLTAC+++G V + K F M Y +KP+I+
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY C+VD LGRAGLL+EA++ I+ MP P+A+IWG+LL ACR H NIE+ ++ + +I +
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAI 445
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
D YV +N++A ++++A E R LMKE + K PGCS I ++G HEF+AG R
Sbjct: 446 DPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRS 505
Query: 480 HPKAPEV 486
HP+ ++
Sbjct: 506 HPEIEKI 512
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/491 (38%), Positives = 309/491 (62%), Gaps = 9/491 (1%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTS------PAGDINYAYLVFTQIKKPNLFIWN 56
DLK IH L++T L D ASR+LA C P + YAY +F+QI+ PNLF++N
Sbjct: 27 DLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFN 86
Query: 57 TIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR FS + P A + ML S I P +T+P L KA +++ G Q H ++V+
Sbjct: 87 LLIRCFSTGAEPSKAFGFYTQML-KSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVR 145
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G + D ++ N++++MYANCGF++ A +F ++ DVV+W SM+ G KCG ++ +R
Sbjct: 146 FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFR-DVVSWTSMVAGYCKCGMVENARE 204
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M RN +W+ MI+GY +N F++A++LF M+ + + +E MVS++++CA LGA
Sbjct: 205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGA 264
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ GE + ++V + +N I+ TA++DM+ +CG E+A+ VF +P+ W+S++ G
Sbjct: 265 LEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKG 324
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA++G+ ++A+ FS + S P ++F AVL+AC+H G V + + + M + + I+P
Sbjct: 325 LAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEP 384
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
++HY C+VD LGRAG L EAE I M P+A I G+LL AC+ + N E+A++ +
Sbjct: 385 RLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNML 444
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
I++ S YVL+SN+YA + Q+++ R +MKE ++K PG SLIE+DG++++F G
Sbjct: 445 IKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMG 504
Query: 477 -GRLHPKAPEV 486
+ HP+ ++
Sbjct: 505 DDQKHPEMGKI 515
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/479 (40%), Positives = 301/479 (62%), Gaps = 13/479 (2%)
Query: 34 AGDINYAYLVFTQIKKPNL--FIWNTIIRGFSQ--SSTPRNAILLFIDMLVTSPIQPQRL 89
A I YA +F I+ L F+WN IIR SS R++ + + + P
Sbjct: 5 AAIIAYANPIF-HIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFH 63
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T+P L ++ G + H +++ GL+ D F+ +++ MY++CG L A+ +FD+
Sbjct: 64 TFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
++ D+ AWNS++ AK G ID++R+LFD+M RN +SW+ +I+GYV K+KEAL+LF
Sbjct: 124 GSK-DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLF 182
Query: 210 REMQ-----EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIID 264
REMQ E ++P+EFTM ++L+AC +LGA+ QG+W+H ++ E++ ++ TA+ID
Sbjct: 183 REMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALID 242
Query: 265 MYCKCGCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSS-NLKPDY 322
MY KCG ERA +VFN + KK + +++M+ LAM G +E +LFS + +S N+ P+
Sbjct: 243 MYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNS 302
Query: 323 ISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIR 382
++F+ +L AC H G +N+ K YF +M E + I PSI+HY CMVD GR+GL++EAE I
Sbjct: 303 VTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIA 362
Query: 383 SMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEE 442
SMP +PD +IWGSLLS R G+I+ + A K++IELD S YVL+SN+YA + ++ E
Sbjct: 363 SMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME 422
Query: 443 AMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R M+ I K PGCS +EV+G VHEFV G ++ +Y +L+++ ++E G
Sbjct: 423 VKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAG 481
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 139/335 (41%), Gaps = 70/335 (20%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++ HA ++ GL KDP + +L +S GD+ A VF +L WN+++ +++
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSS-CGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 65 SS------------TPRN-------------------AILLFIDMLVTSP----IQPQRL 89
+ RN A+ LF +M + P ++P
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T ++ A +LG G +H + K +E D + +I MYA CG L A+ +F+ +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
++ DV A+++MI LA G DE +LF +M + +
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD------------------------ 296
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV--VTAIIDMYC 267
NI P+ T V +L AC G I +G+ ++ F + + ++D+Y
Sbjct: 297 ------NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE-FGITPSIQHYGCMVDLYG 349
Query: 268 KCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
+ G + A ++P + + W S++ G M G
Sbjct: 350 RSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLG 384
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/488 (37%), Positives = 303/488 (62%), Gaps = 2/488 (0%)
Query: 3 DLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
+ KKI+A +I GL++ ++++ FC D++YA +F Q+ PN+F++N+IIR +
Sbjct: 25 EWKKINASIIIHGLSQSSFMVTKMVDFCDKIE-DMDYATRLFNQVSNPNVFLYNSIIRAY 83
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFD 122
+ +S + I ++ +L S P R T+P +FK+ A LG G Q+HG + K G F
Sbjct: 84 THNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFH 143
Query: 123 QFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
N +I MY L +A +FDE+ E DV++WNS++ G A+ G++ +++ LF M+
Sbjct: 144 VVTENALIDMYMKFDDLVDAHKVFDEM-YERDVISWNSLLSGYARLGQMKKAKGLFHLML 202
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
+ VSW +MISGY + EA++ FREMQ I+P E +++S+L +CA+LG++ G+W
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKW 262
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH + F T V A+I+MY KCG +A+Q+F + K + W++M+ G A +G
Sbjct: 263 IHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGN 322
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
+ AI+ F+ +Q + +KP+ I+F+ +L+AC+H G + YF +M + Y+I+P I+HY
Sbjct: 323 AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYG 382
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKN 422
C++D L RAG LE A ++ ++MP PD+ IWGSLLS+CR GN+++A A ++EL+
Sbjct: 383 CLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPE 442
Query: 423 ESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPK 482
+ YVL++N+YA ++E+ R +++ ++K PG SLIEV+ V EFV+G P
Sbjct: 443 DMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPF 502
Query: 483 APEVYLLL 490
E+ ++L
Sbjct: 503 WTEISIVL 510
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/490 (38%), Positives = 301/490 (61%), Gaps = 3/490 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
KK+H H++K GL + + L S G ++ A VF + K ++F WN +I G+++
Sbjct: 155 KKLHCHVVKFGLGSN-LYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+I L ++M + + P +T + A +++ ++H V + E
Sbjct: 214 MKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ YA CG + A +F + DV++W S++ G + G + +R FD+M R
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ +SW MI GY+R F E+LE+FREMQ + P EFTMVS+L ACA LG++ GEWI
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N + + +V A+IDMY KCGC E+A +VF+ + ++ W +MV GLA NG
Sbjct: 392 TYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQ 451
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
EAIK+F +Q +++PD I+++ VL+ACNHSG V+QA+ +F M ++I+PS+ HY CM
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAGL++EA +++R MP +P++I+WG+LL A R H + MA+ AAK+I+EL+ +
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNG 571
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
Y L+ N+YA ++++ E R + +V I+K PG SLIEV+G HEFVAG + H ++
Sbjct: 572 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 631
Query: 485 EVYLLLNDLG 494
E+Y+ L +L
Sbjct: 632 EIYMKLEELA 641
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 209/428 (48%), Gaps = 26/428 (6%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAF-CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
K++H+ I G+A +P ++ F C+ G ++YAY +F +I +P++ +WN +I+G+
Sbjct: 50 FKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGW 109
Query: 63 SQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA------QLHGRVVK 116
S+ + L+++ML + P T+P L GL RDG +LH VVK
Sbjct: 110 SKVDCDGEGVRLYLNML-KEGVTPDSHTFPFLLN-----GLKRDGGALACGKKLHCHVVK 163
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
GL + ++ N ++ MY+ CG + AR +FD E DV +WN MI G + E +ES
Sbjct: 164 FGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE-DVFSWNLMISGYNRMKEYEESIE 222
Query: 177 LFDKMVSRNTVSWNS----MISGYVRNVKFKEALELFRE-MQEQNIKPSEFTMVSLLNAC 231
L +M RN VS S ++ VK K+ + E + E +PS +L+NA
Sbjct: 223 LLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY 281
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
A G + I + + I T+I+ Y + G + A F+ +P + W
Sbjct: 282 AACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
M+ G G NE++++F +QS+ + PD + ++VLTAC H G + + ++ +
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL-EIGEWIKTYIDK 396
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
KIK + + ++D + G E+A+K+ M D W +++ +G + A +
Sbjct: 397 NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM-DQRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 412 AAKQIIEL 419
Q+ ++
Sbjct: 456 VFFQMQDM 463
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 140/279 (50%), Gaps = 8/279 (2%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 228
G + + +LF K+ + V WN+MI G+ + E + L+ M ++ + P T LL
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 229 NACAKLG-AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
N + G A+ G+ +H +V N V A++ MY CG + A VF+ K+ +
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 288 SCWNSMVFGL-AMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
WN M+ G M YE E+I+L ++ + + P ++ + VL+AC+ + K
Sbjct: 202 FSWNLMISGYNRMKEYE-ESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNI 406
++E K +PS++ + +V+A G ++ A ++ RSM + D I W S++ + GN+
Sbjct: 261 YVSEC-KTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR-DVISWTSIVKGYVERGNL 318
Query: 407 EMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
++A+ Q+ D+ + +M + Y + F E++E
Sbjct: 319 KLARTYFDQMPVRDR---ISWTIMIDGYLRAGCFNESLE 354
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 166/350 (47%), Gaps = 20/350 (5%)
Query: 2 KDL-KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
KDL K++H ++ + + + L + G+++ A +F +K ++ W +I++
Sbjct: 252 KDLCKRVHEYVSECK-TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVK 310
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G+ + + A F M P++ R+++ + Y + G + ++ + G+
Sbjct: 311 GYVERGNLKLARTYFDQM----PVR-DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 121 FDQFIHNTIIYMYANCGFLSEA---RLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
D+F +++ A+ G L + D+ + DVV N++I KCG ++++++
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAI 237
F M R+ +W +M+ G N + +EA+++F +MQ+ +I+P + T + +L+AC G +
Sbjct: 426 FHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMV 485
Query: 238 RQG-EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
Q ++ + E + + ++DM + G + A ++ +P NS+V+G
Sbjct: 486 DQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNP----NSIVWG 541
Query: 297 LAMNG---YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKD 343
+ + +E + + + L+PD + A+L CN + KD
Sbjct: 542 ALLGASRLHNDEPMAELAAKKILELEPDNGAVYALL--CNIYAGCKRWKD 589
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/491 (36%), Positives = 304/491 (61%), Gaps = 36/491 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSP-AGDINYAYLVFTQIKKPNLFIWNTI 58
+ ++++ HA ++KTGL D +AS+++AF T+P ++YA+ + +I PN F N++
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IR ++ SSTP A+ +F +ML+ P+ P + ++ + KA A +G Q+HG +K G
Sbjct: 112 IRAYANSSTPEVALTVFREMLL-GPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 119 LEFDQFIHNTIIYMYANCGF-------------------------------LSEARLMFD 147
L D F+ NT++ +Y G+ + EAR +FD
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFD 230
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALE 207
E++ E +V +WN MI G A G + E++ +FD M R+ VSWN+M++ Y + E LE
Sbjct: 231 EME-ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLE 289
Query: 208 LFREMQEQNI-KPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMY 266
+F +M + + KP FT+VS+L+ACA LG++ QGEW+H ++ + E+ + TA++DMY
Sbjct: 290 VFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMY 349
Query: 267 CKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFI 326
KCG ++AL+VF K+ +S WNS++ L+++G +A+++FS + KP+ I+FI
Sbjct: 350 SKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFI 409
Query: 327 AVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
VL+ACNH G ++QA+ F +M+ Y+++P+I+HY CMVD LGR G +EEAE+L+ +P+
Sbjct: 410 GVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPA 469
Query: 387 DPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEE 446
D +I+ SLL AC++ G +E A++ A +++EL+ +S GY MSNLYA+ ++E+ ++
Sbjct: 470 DEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDG 529
Query: 447 RLLMKEVKIEK 457
R M+ ++ +
Sbjct: 530 RRNMRAERVNR 540
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 362 bits (930), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 187/506 (36%), Positives = 303/506 (59%), Gaps = 40/506 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKD-PIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ LK+IHA ++ GL + + I + S G + YA+ +F +I KP++ I N ++
Sbjct: 25 IRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVL 84
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG +QS P + L+ +M + P R T+ + KA ++L +G HG+VV+ G
Sbjct: 85 RGSAQSMKPEKTVSLYTEM-EKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGF 143
Query: 120 EFDQFIHNTIIYMYANCGFL-------------------------------SEARLMFDE 148
++++ N +I +ANCG L EA +FDE
Sbjct: 144 VLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDE 203
Query: 149 VDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALEL 208
+ + D VAWN MI G KC E+D +R LFD+ ++ V+WN+MISGYV KEAL +
Sbjct: 204 MPYK-DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGI 262
Query: 209 FREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL-----VTNCFELNTIVVTAII 263
F+EM++ P T++SLL+ACA LG + G+ +H ++ V++ + T + A+I
Sbjct: 263 FKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALI 322
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY KCG +RA++VF V + LS WN+++ GLA++ E +I++F +Q + P+ +
Sbjct: 323 DMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEG-SIEMFEEMQRLKVWPNEV 381
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+FI V+ AC+HSG+V++ + YF+LM + Y I+P+IKHY CMVD LGRAG LEEA + S
Sbjct: 382 TFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVES 441
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
M +P+AI+W +LL AC+ +GN+E+ K A ++++ + K+ES YVL+SN+YA++ Q++
Sbjct: 442 MKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGV 501
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGE 469
+ R + + +++K G SLIE D +
Sbjct: 502 QKVRKMFDDTRVKKPTGVSLIEEDDD 527
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 361 bits (926), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 177/463 (38%), Positives = 284/463 (61%), Gaps = 2/463 (0%)
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ GD+ A VF + +L WN +I G+ + AI ++ ++ + ++P +T
Sbjct: 202 ASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVY-KLMESEGVKPDDVTM 260
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
L + + LG G + + V + GL + N ++ M++ CG + EAR +FD ++
Sbjct: 261 IGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK 320
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+V+W +MI G A+CG +D SR+LFD M ++ V WN+MI G V+ + ++AL LF+E
Sbjct: 321 R-TIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 212 MQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGC 271
MQ N KP E TM+ L+AC++LGA+ G WIH ++ LN + T+++DMY KCG
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 272 PERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTA 331
AL VF+ + + + +++ GLA++G + AI F+ + + + PD I+FI +L+A
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Query: 332 CNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAI 391
C H G + +DYF+ M + + P +KHYS MVD LGRAGLLEEA++L+ SMP + DA
Sbjct: 500 CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAA 559
Query: 392 IWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMK 451
+WG+LL CR HGN+E+ ++AAK+++ELD ++S YVL+ +Y + +E+A R +M
Sbjct: 560 VWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMN 619
Query: 452 EVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLG 494
E +EK PGCS IEV+G V EF+ + P++ ++Y L+ LG
Sbjct: 620 ERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLG 662
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 219/449 (48%), Gaps = 68/449 (15%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTIIRGF 62
LK+I A +I GL DP A+SR++AFC S + ++Y+ + I+ PN+F WN IRGF
Sbjct: 69 LKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGF 128
Query: 63 SQSSTPRNAILLFIDMLVTSPIQ--PQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
S+S P+ + LL+ ML + P TYP LFK A L L+ G + G V+K LE
Sbjct: 129 SESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
+HN I+M+A+CG + AR +FDE D+V+WN +I G K GE +
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPVR-DLVSWNCLINGYKKIGEAE-------- 239
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG 240
+A+ +++ M+ + +KP + TM+ L+++C+ LG + +G
Sbjct: 240 -----------------------KAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRG 276
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ + ++ N + +V A++DM+ KCG A ++F+ + K+ + W +M+ G A
Sbjct: 277 KEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 301 GYEN-------------------------------EAIKLFSGLQSSNLKPDYISFIAVL 329
G + +A+ LF +Q+SN KPD I+ I L
Sbjct: 337 GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCL 396
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
+AC+ G ++ + E Y + ++ + +VD + G + EA + + + +
Sbjct: 397 SACSQLGALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT-RN 454
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
++ + +++ HG+ A ++I+
Sbjct: 455 SLTYTAIIGGLALHGDASTAISYFNEMID 483
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 141/294 (47%), Gaps = 11/294 (3%)
Query: 164 GLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNI---KPS 220
L++ +D S ++ + + N SWN I G+ + KE+ L+++M +P
Sbjct: 96 ALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPD 155
Query: 221 EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFN 280
FT L CA L G I ++ EL + V A I M+ CG E A +VF+
Sbjct: 156 HFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD 215
Query: 281 TVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQ 340
P + L WN ++ G G +AI ++ ++S +KPD ++ I ++++C+ G +N+
Sbjct: 216 ESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNR 275
Query: 341 AKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSAC 400
K+++ + E ++ +I + ++D + G + EA ++ ++ + W +++S
Sbjct: 276 GKEFYEYVKEN-GLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT-IVSWTTMISGY 333
Query: 401 RKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVK 454
+ G ++++++ + E D VL + + S Q + + L +E++
Sbjct: 334 ARCGLLDVSRKLFDDMEEKD------VVLWNAMIGGSVQAKRGQDALALFQEMQ 381
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 361 bits (926), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 186/502 (37%), Positives = 296/502 (58%), Gaps = 13/502 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H+ + K+ D S ++ S G++N A VF ++ N+ WN++I F Q+
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDM-YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 231
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQF 124
A+ +F M++ S ++P +T S+ A A L + G ++HGRVVK L D
Sbjct: 232 GPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII 290
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N + MYA C + EAR +FD + +V+A SMI G A +R +F KM R
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISGYAMAASTKAARLMFTKMAER 349
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N VSWN++I+GY +N + +EAL LF ++ +++ P+ ++ ++L ACA L + G H
Sbjct: 350 NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 245 NFLVTNCFELNT------IVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
++ + F+ + V ++IDMY KCGC E VF + ++ WN+M+ G A
Sbjct: 410 VHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFA 469
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
NGY NEA++LF + S KPD+I+ I VL+AC H+G V + + YF+ MT + + P
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
HY+CMVD LGRAG LEEA+ +I MP PD++IWGSLL+AC+ H NI + K A++++E
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 589
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
++ + S YVL+SN+YA ++E+ M R M++ + K+PGCS I++ G H F+ +
Sbjct: 590 VEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDK 649
Query: 479 LHPKAPEVYLLLNDLGLLIQEM 500
HP+ +++ LL+ +LI EM
Sbjct: 650 SHPRKKQIHSLLD---ILIAEM 668
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 167/312 (53%), Gaps = 5/312 (1%)
Query: 110 LHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCG 169
+H V+K G + FI N +I Y+ CG L + R +FD++ + ++ WNS++ GL K G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM-PQRNIYTWNSVVTGLTKLG 100
Query: 170 EIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLN 229
+DE+ LF M R+ +WNSM+SG+ ++ + +EAL F M ++ +E++ S+L+
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 230 ACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSC 289
AC+ L + +G +H+ + + F + + +A++DMY KCG A +VF+ + + +
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 290 WNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMT 349
WNS++ NG EA+ +F + S ++PD ++ +V++AC + ++ +
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 350 ETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD----PDAIIWGSLLSACRKHGN 405
+ K++ I + VD + ++EA + SMP ++I G ++A K
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 406 IEMAKQAAKQII 417
+ K A + ++
Sbjct: 341 LMFTKMAERNVV 352
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 210/487 (43%), Gaps = 111/487 (22%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
++ +HA +IK+G + + +R++ S G + VF ++ + N++ WN+++ G +
Sbjct: 39 VRYVHASVIKSGFSNEIFIQNRLID-AYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 64 QSSTPRNAILLFIDM----------LVTSPIQPQR--------------------LTYPS 93
+ A LF M +V+ Q R ++ S
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 94 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 153
+ A + L G Q+H + K D +I + ++ MY+ CG +++A+ +FDE+
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR- 216
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
+VV+WN S+I+ + +N EAL++F+ M
Sbjct: 217 NVVSWN-------------------------------SLITCFEQNGPAVEALDVFQMML 245
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVT-AIIDMYCKCGCP 272
E ++P E T+ S+++ACA L AI+ G+ +H +V N N I+++ A +DMY KC
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 273 ERALQVFNTVP-------------------------------KKGLSCWNSMVFGLAMNG 301
+ A +F+++P ++ + WN+++ G NG
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
EA+ LF L+ ++ P + SF +L AC + A+ + + + +K K
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKAC-----ADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 362 S----------CMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
S ++D + G +EE + R M + D + W +++ ++G A +
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 412 AAKQIIE 418
++++E
Sbjct: 480 LFREMLE 486
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 36/211 (17%)
Query: 227 LLNAC--AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
LL++C +KL AI ++H ++ + F + +ID Y KCG E QVF+ +P+
Sbjct: 25 LLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQ 83
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL-------------------------- 318
+ + WNS+V GL G+ +EA LF + +
Sbjct: 84 RNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMM 143
Query: 319 -KPDYI----SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGL 373
K ++ SF +VL+AC+ +N+ +L+ ++ + S +VD + G
Sbjct: 144 HKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS-PFLSDVYIGSALVDMYSKCGN 202
Query: 374 LEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
+ +A+++ M D + + W SL++ ++G
Sbjct: 203 VNDAQRVFDEM-GDRNVVSWNSLITCFEQNG 232
>sp|P0C8Q7|PP369_ARATH Pentatricopeptide repeat-containing protein At5g08305
OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1
Length = 534
Score = 360 bits (925), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/498 (37%), Positives = 306/498 (61%), Gaps = 7/498 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
M +L KIH LI GL+++ S+ L+F S +GD++YAY +++ P + WN +I
Sbjct: 21 MSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVI 80
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RGFS S P +I ++I ML + P +TYP L K+ ++L + G LH VVK GL
Sbjct: 81 RGFSNSRNPEKSISVYIQMLRFG-LLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGL 139
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
E+D FI NT+I+MY + + AR +FDE+ + ++V WNS++ AK G++ +R +FD
Sbjct: 140 EWDLFICNTLIHMYGSFRDQASARKLFDEMPHK-NLVTWNSILDAYAKSGDVVSARLVFD 198
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIR 238
+M R+ V+W+SMI GYV+ ++ +ALE+F +M + K +E TMVS++ ACA LGA+
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALN 258
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF--NTVPKKGLSCWNSMVFG 296
+G+ +H +++ L I+ T++IDMY KCG A VF +V + WN+++ G
Sbjct: 259 RGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGG 318
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA +G+ E+++LF ++ S + PD I+F+ +L AC+H G V +A +F + E+ +P
Sbjct: 319 LASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEP 377
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+HY+CMVD L RAGL+++A I MP P + G+LL+ C HGN+E+A+ K++
Sbjct: 378 KSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKL 437
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
IEL + YV ++N+YA + QF A R M++ ++K G S++++DG H F+A
Sbjct: 438 IELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAH 497
Query: 477 GRLHPKAPEVYLLLNDLG 494
+ H + ++Y +L G
Sbjct: 498 DKTHFHSDKIYAVLQLTG 515
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 356 bits (914), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 302/490 (61%), Gaps = 4/490 (0%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ +H +K+ + D A+ ++ C GD++ A VFT IK+ ++ WN++I GF Q
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLI-HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+P A+ LF M + ++ +T + A A++ G Q+ + + + +
Sbjct: 210 KGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT 268
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N ++ MY CG + +A+ +FD ++ E D V W +M+ G A + + +R + + M +
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+ V+WN++IS Y +N K EAL +F E+Q ++N+K ++ T+VS L+ACA++GA+ G WI
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H+++ + +N V +A+I MY KCG E++ +VFN+V K+ + W++M+ GLAM+G
Sbjct: 388 HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 447
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
NEA+ +F +Q +N+KP+ ++F V AC+H+G V++A+ F M Y I P KHY+C
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
+VD LGR+G LE+A K I +MP P +WG+LL AC+ H N+ +A+ A +++EL+
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRN 567
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
+VL+SN+YA ++E E R M+ ++KEPGCS IE+DG +HEF++G HP +
Sbjct: 568 DGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMS 627
Query: 484 PEVYLLLNDL 493
+VY L+++
Sbjct: 628 EKVYGKLHEV 637
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 209/437 (47%), Gaps = 67/437 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ LK+ H H+I+TG DP +AS++ A S + YA VF +I KPN F WNT+I
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLI 102
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R ++ P +I F+DM+ S P + T+P L KA A++ G LHG VK +
Sbjct: 103 RAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAV 162
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F+ N++I+ Y +CG L A +F + E DVV+WNSMI G + G D++ LF
Sbjct: 163 GSDVFVANSLIHCYFSCGDLDSACKVFTTI-KEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
K M+ +++K S TMV +L+ACAK+ +
Sbjct: 222 K-------------------------------MESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF-------------------- 279
G + +++ N +N + A++DMY KCG E A ++F
Sbjct: 251 GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310
Query: 280 -----------NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQ-SSNLKPDYISFIA 327
N++P+K + WN+++ NG NEA+ +F LQ N+K + I+ ++
Sbjct: 311 SEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVS 370
Query: 328 VLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSD 387
L+AC G + + + + + I+ + S ++ + G LE++ ++ S+
Sbjct: 371 TLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 429
Query: 388 PDAIIWGSLLSACRKHG 404
D +W +++ HG
Sbjct: 430 -DVFVWSAMIGGLAMHG 445
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 356 bits (914), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/492 (37%), Positives = 296/492 (60%), Gaps = 7/492 (1%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IHA +I+T +D ++ C S ++YAY VF+ + PN++++ +I GF S
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVC-STLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSG 106
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
+ + L+ M+ S + P S+ KA L + R ++H +V+K G + +
Sbjct: 107 RSADGVSLYHRMIHNS-VLPDNYVITSVLKA-CDLKVCR---EIHAQVLKLGFGSSRSVG 161
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
++ +Y G L A+ MFDE+ + D VA MI ++CG I E+ LF + ++T
Sbjct: 162 LKMMEIYGKSGELVNAKKMFDEM-PDRDHVAATVMINCYSECGFIKEALELFQDVKIKDT 220
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNF 246
V W +MI G VRN + +ALELFREMQ +N+ +EFT V +L+AC+ LGA+ G W+H+F
Sbjct: 221 VCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSF 280
Query: 247 LVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEA 306
+ EL+ V A+I+MY +CG A +VF + K + +N+M+ GLAM+G EA
Sbjct: 281 VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Query: 307 IKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVD 366
I F + + +P+ ++ +A+L AC+H G ++ + F M + ++P I+HY C+VD
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVD 400
Query: 367 ALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG 426
LGR G LEEA + I ++P +PD I+ G+LLSAC+ HGN+E+ ++ AK++ E + +S
Sbjct: 401 LLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGT 460
Query: 427 YVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
YVL+SNLYA+S +++E+ E R M++ IEKEPGCS IEVD ++HEF+ G HP +
Sbjct: 461 YVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAI 520
Query: 487 YLLLNDLGLLIQ 498
Y L +L +++
Sbjct: 521 YQRLQELNRILR 532
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 353 bits (907), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/503 (36%), Positives = 307/503 (61%), Gaps = 8/503 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+K LK+ H ++I TGL +D + ++ + C S AG + YAY VFT PN ++ NT+IR
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEAC-SNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 61 GFSQSSTPRN---AILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
S P AI ++ + +P T+P + K ++ G Q+HG+VV
Sbjct: 87 ALSLLDEPNAHSIAITVYRKLWALCA-KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 145
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G + + +I MY +CG L +AR MFDE+ + DV WN+++ G K GE+DE+R L
Sbjct: 146 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK-DVNVWNALLAGYGKVGEMDEARSL 204
Query: 178 FDKMVS--RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+ M RN VSW +ISGY ++ + EA+E+F+ M +N++P E T++++L+ACA LG
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
++ GE I +++ + A+IDMY K G +AL VF V ++ + W +++
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
GLA +G+ EA+ +F+ + + ++P+ ++FIA+L+AC+H G V+ K F M Y I
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIH 384
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P+I+HY CM+D LGRAG L EA+++I+SMP +A IWGSLL+A H ++E+ ++A +
Sbjct: 385 PNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSE 444
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+I+L+ N S Y+L++NLY+ +++E+ R +MK + ++K G S IEV+ V++F++
Sbjct: 445 LIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFIS 504
Query: 476 GGRLHPKAPEVYLLLNDLGLLIQ 498
G HP+ ++ +L ++ L IQ
Sbjct: 505 GDLTHPQVERIHEILQEMDLQIQ 527
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 191/500 (38%), Positives = 294/500 (58%), Gaps = 10/500 (2%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+IHA +++ L P L + A G I ++ +F Q P+LF++ I S
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ A LL++ +L +S I P T+ SL K+ + + G +H V+K GL D
Sbjct: 107 INGLKDQAFLLYVQLL-SSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDP 161
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
++ ++ +YA G + A+ +FD + E +V+ +MI AK G ++ +R LFD M
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRM-PERSLVSSTAMITCYAKQGNVEAARALFDSMCE 220
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
R+ VSWN MI GY ++ +AL LF+++ E KP E T+V+ L+AC+++GA+ G W
Sbjct: 221 RDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRW 280
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH F+ ++ LN V T +IDMY KCG E A+ VFN P+K + WN+M+ G AM+GY
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 303 ENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHY 361
+A++LF+ +Q + L+P I+FI L AC H+G VN+ F M + Y IKP I+HY
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY 400
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
C+V LGRAG L+ A + I++M D D+++W S+L +C+ HG+ + K+ A+ +I L+
Sbjct: 401 GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNI 460
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP 481
S YVL+SN+YA+ +E + R LMKE I KEPG S IE++ +VHEF AG R H
Sbjct: 461 KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHS 520
Query: 482 KAPEVYLLLNDLGLLIQEMG 501
K+ E+Y +L + I+ G
Sbjct: 521 KSKEIYTMLRKISERIKSHG 540
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 63/270 (23%)
Query: 2 KDLKKIHAHLIKTGLAKDP------------------------------IAASRILAFCT 31
K K IH H++K GL DP + +S + C
Sbjct: 143 KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCY 202
Query: 32 SPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTY 91
+ G++ A +F + + ++ WN +I G++Q P +A++LF +L +P +T
Sbjct: 203 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 262
Query: 92 PSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT 151
+ A +Q+G G +H V + + + +I MY+ CG L EA L+F++
Sbjct: 263 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 322
Query: 152 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFRE 211
+ D+VAWN+MI G A + GY ++AL LF E
Sbjct: 323 K-DIVAWNAMIAGYA--------------------------MHGYS-----QDALRLFNE 350
Query: 212 MQE-QNIKPSEFTMVSLLNACAKLGAIRQG 240
MQ ++P++ T + L ACA G + +G
Sbjct: 351 MQGITGLQPTDITFIGTLQACAHAGLVNEG 380
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 180/492 (36%), Positives = 298/492 (60%), Gaps = 8/492 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+K+H + +K GL D ++ ++ S G I + VF ++ + ++ WN +I +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYAS-LGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ +AI +F M S ++ T S A + L G +++ VV + E
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVR 183
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I N ++ M+ CG L +AR +FD + + +V W SM+ G G IDE+R LF++ +
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDK-NVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
+ V W +M++GYV+ +F EALELFR MQ I+P F +VSLL CA+ GA+ QG+WIH
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ N ++ +V TA++DMY KCGC E AL+VF + ++ + W S+++GLAMNG
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A+ L+ +++ ++ D I+F+AVLTACNH G V + + F MTE + ++P +H SC+
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAI---IWGSLLSACRKHGNIEMAKQAAKQIIELDK 421
+D L RAGLL+EAE+LI M + D ++ SLLSA R +GN+++A++ A+++ +++
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Query: 422 NESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL-- 479
++S + L++++YA++ ++E+ R MK++ I K PGCS IE+DG HEF+ G L
Sbjct: 483 SDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLS 542
Query: 480 HPKAPEVYLLLN 491
HPK E+ +L+
Sbjct: 543 HPKMDEINSMLH 554
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 192/390 (49%), Gaps = 68/390 (17%)
Query: 47 IKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARD 106
++ P+L ++N +++ + + + LF + L + P T P + K+ +L +
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGE-LRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 107 GAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLA 166
G ++HG VK GLEFD ++ N+++ MYA+ G + +FDE+ + DVV+W
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEM-PQRDVVSW-------- 115
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMV 225
N +IS YV N +F++A+ +F+ M QE N+K E T+V
Sbjct: 116 -----------------------NGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIV 152
Query: 226 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKK 285
S L+AC+ L + GE I+ F+VT FE++ + A++DM+CKCGC ++A VF+++ K
Sbjct: 153 STLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK 211
Query: 286 GLSCWNSMVFGLA--------------------------MNGYE-----NEAIKLFSGLQ 314
+ CW SMVFG MNGY +EA++LF +Q
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 271
Query: 315 SSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLL 374
++ ++PD +++LT C +G + Q K + E ++ + +VD + G +
Sbjct: 272 TAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN-RVTVDKVVGTALVDMYAKCGCI 330
Query: 375 EEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
E A ++ + + D W SL+ +G
Sbjct: 331 ETALEVFYEIK-ERDTASWTSLIYGLAMNG 359
Score = 95.9 bits (237), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 127/261 (48%), Gaps = 13/261 (4%)
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
+N M+ F + L LF E++ Q + P FT+ +L + +L + +GE +H + V
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
E ++ V +++ MY G E +VF+ +P++ + WN ++ NG +AI
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 309 LFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDA 367
+F + Q SNLK D + ++ L+AC+ + + + + +++ S++ + +VD
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM--SVRIGNALVDM 191
Query: 368 LGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGY 427
+ G L++A + SM D + W S++ G I+ A+ + +++
Sbjct: 192 FCKCGCLDKARAVFDSM-RDKNVKCWTSMVFGYVSTGRIDEAR------VLFERSPVKDV 244
Query: 428 VL---MSNLYAASYQFEEAME 445
VL M N Y +F+EA+E
Sbjct: 245 VLWTAMMNGYVQFNRFDEALE 265
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 344 bits (883), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 186/518 (35%), Positives = 295/518 (56%), Gaps = 51/518 (9%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAA---SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNT 57
M LK++HA ++T ++P +IL +S D+NYA+ VF I+ + F+WNT
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQL-SSSFSDVNYAFRVFDSIENHSSFMWNT 119
Query: 58 IIRGFSQS-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK 116
+IR + S A +L+ ML P + T+P + KA A + +G Q+H ++VK
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 179
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G D +++N +I++Y +C G +D +R+
Sbjct: 180 HGFGGDVYVNNGLIHLYGSC--------------------------------GCLDLARK 207
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+FD+M R+ VSWNSMI VR ++ AL+LFREMQ ++ +P +TM S+L+ACA LG+
Sbjct: 208 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGS 266
Query: 237 IRQGEWIHNFLVTNC---FELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSM 293
+ G W H FL+ C ++ +V ++I+MYCKCG A QVF + K+ L+ WN+M
Sbjct: 267 LSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAM 326
Query: 294 VFGLAMNGYENEAIKLFSGL--QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
+ G A +G EA+ F + + N++P+ ++F+ +L ACNH G VN+ + YF +M
Sbjct: 327 ILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD 386
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAK 410
Y I+P+++HY C+VD + RAG + EA ++ SMP PDA+IW SLL AC K G ++E+++
Sbjct: 387 YCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Query: 411 QAAKQII-------ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSL 463
+ A+ II + N S YVL+S +YA++ ++ + R LM E I KEPGCS
Sbjct: 447 EIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSS 506
Query: 464 IEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
IE++G HEF AG HP+ ++Y L + ++ +G
Sbjct: 507 IEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIG 544
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/496 (36%), Positives = 292/496 (58%), Gaps = 39/496 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAF----CTSPAGDINYAYLVFTQIKKP-NLFIWNTI 58
L++IHA I+ G++ + L F SP ++YA+ VF++I+KP N+FIWNT+
Sbjct: 33 LRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPP-PMSYAHKVFSKIEKPINVFIWNTL 91
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
IRG+++ +A L+ +M V+ ++P TYP L KA + R G +H V++ G
Sbjct: 92 IRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 151
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
++ N+++++YANC G++ + ++F
Sbjct: 152 FGSLIYVQNSLLHLYANC--------------------------------GDVASAYKVF 179
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
DKM ++ V+WNS+I+G+ N K +EAL L+ EM + IKP FT+VSLL+ACAK+GA+
Sbjct: 180 DKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT 239
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+ +H +++ N ++D+Y +CG E A +F+ + K W S++ GLA
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 299 MNGYENEAIKLFSGLQSS-NLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPS 357
+NG+ EAI+LF ++S+ L P I+F+ +L AC+H G V + +YF M E YKI+P
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 359
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQII 417
I+H+ CMVD L RAG +++A + I+SMP P+ +IW +LL AC HG+ ++A+ A QI+
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQIL 419
Query: 418 ELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGG 477
+L+ N S YVL+SN+YA+ ++ + + R M ++K PG SL+EV VHEF+ G
Sbjct: 420 QLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGD 479
Query: 478 RLHPKAPEVYLLLNDL 493
+ HP++ +Y L ++
Sbjct: 480 KSHPQSDAIYAKLKEM 495
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 338 bits (868), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 303/559 (54%), Gaps = 69/559 (12%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ +K++HA +I+ L +D A ++++ S N A VF Q+++PN+ + N++IR
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLIS-ALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+Q+S P A +F +M + TYP L KA + +H + K GL
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFG-LFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLS 149
Query: 121 FDQFIHNTIIYMYANCGFLS--EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D ++ N +I Y+ CG L +A +F+++ +E D V+WNSM+ GL K GE+ ++RRLF
Sbjct: 150 SDIYVPNALIDCYSRCGGLGVRDAMKLFEKM-SERDTVSWNSMLGGLVKAGELRDARRLF 208
Query: 179 D-------------------------------KMVSRNTVSWNSMISGY----------- 196
D KM RNTVSW++M+ GY
Sbjct: 209 DEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 197 --------VRNVK--------------FKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
+NV KEA L +M +K ++S+L AC +
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
G + G IH+ L + N V+ A++DMY KCG ++A VFN +PKK L WN+M+
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTML 388
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
GL ++G+ EAI+LFS ++ ++PD ++FIAVL +CNH+G +++ DYF M + Y +
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAK 414
P ++HY C+VD LGR G L+EA K++++MP +P+ +IWG+LL ACR H +++AK+
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
Query: 415 QIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFV 474
+++LD + Y L+SN+YAA+ +E + R MK + +EK G S +E++ +HEF
Sbjct: 509 NLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFT 568
Query: 475 AGGRLHPKAPEVYLLLNDL 493
+ HPK+ ++Y +L L
Sbjct: 569 VFDKSHPKSDQIYQMLGSL 587
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 10/220 (4%)
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
L CA L ++Q +H ++ + + +I C A++VFN V + +
Sbjct: 26 LPKCANLNQVKQ---LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTL 347
NS++ A N +A +FS +Q L D ++ +L AC+ + K
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 348 MTETYKIKPSIKHYSCMVDALGRAGLL--EEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+ E + I + ++D R G L +A KL M S+ D + W S+L K G
Sbjct: 143 I-EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKM-SERDTVSWNSMLGGLVKAGE 200
Query: 406 IEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+ + A + E+ + + + M + YA + +A E
Sbjct: 201 L---RDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFE 237
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 338 bits (867), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 293/502 (58%), Gaps = 3/502 (0%)
Query: 2 KDLKKIHAHLIKTG-LAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
K++++IHA L G L D + + A S ++YA + + +KP LF N++IR
Sbjct: 20 KEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIR 79
Query: 61 GFSQSSTPRNAILLFIDMLVT-SPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+S P + + +L + + ++P T L +A L + G Q+HG +++G
Sbjct: 80 AHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGF 139
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+ D + +I +YA G L +F+ + D V +M+ A+CG++ +R+LF+
Sbjct: 140 DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCP-DFVCRTAMVTACARCGDVVFARKLFE 198
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
M R+ ++WN+MISGY + + +EAL +F MQ + +K + M+S+L+AC +LGA+ Q
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G W H+++ N ++ + T ++D+Y KCG E+A++VF + +K + W+S + GLAM
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAM 318
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIK 359
NG+ + ++LFS ++ + P+ ++F++VL C+ G V++ + +F M + I+P ++
Sbjct: 319 NGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLE 378
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY C+VD RAG LE+A +I+ MP P A +W SLL A R + N+E+ A+K+++EL
Sbjct: 379 HYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLEL 438
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ YVL+SN+YA S ++ R MK + K+PGCS++EV+GEVHEF G +
Sbjct: 439 ETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKS 498
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HPK ++ + D+ ++ G
Sbjct: 499 HPKYTQIDAVWKDISRRLRLAG 520
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 336 bits (862), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 293/541 (54%), Gaps = 39/541 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGD-INYAYLVFTQIKKPNLFIWNTII 59
++ L +IH IK G+ D +++ C D + YA + +P+ F++NT++
Sbjct: 18 LRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLV 77
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
RG+S+S P N++ +F++M+ + P ++ + KA R G Q+H + +K GL
Sbjct: 78 RGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGL 137
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTE------------------------FDV 155
E F+ T+I MY CG + AR +FDE+ FD
Sbjct: 138 ESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDK 197
Query: 156 V------AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
+ +WN M+ G K GE++ ++R+F +M R+ VSW++MI G N F E+ F
Sbjct: 198 MLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYF 257
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
RE+Q + P+E ++ +L+AC++ G+ G+ +H F+ + V A+IDMY +C
Sbjct: 258 RELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC 317
Query: 270 GCPERALQVFNTV-PKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G A VF + K+ + W SM+ GLAM+G EA++LF+ + + + PD ISFI++
Sbjct: 318 GNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISL 377
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC+H+G + + +DYF+ M Y I+P I+HY CMVD GR+G L++A I MP P
Sbjct: 378 LHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPP 437
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
AI+W +LL AC HGNIE+A+Q +++ ELD N S VL+SN YA + ++++ R
Sbjct: 438 TAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRK 497
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGR-------LHPKAPEVYLLLNDLGLLIQEMG 501
M +I+K SL+EV +++F AG + H K E+ L L D E+
Sbjct: 498 SMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVA 557
Query: 502 S 502
S
Sbjct: 558 S 558
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 99/230 (43%), Gaps = 22/230 (9%)
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPER---ALQVFNT 281
+SLLN+C L A+ Q IH + + ++ +I ++C + A ++
Sbjct: 9 LSLLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLC 64
Query: 282 VPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLK-PDYISFIAVLTACNHSGKVNQ 340
P+ +N++V G + + + ++ +F + PD SF V+ A +
Sbjct: 65 FPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVEN---FRS 121
Query: 341 AKDYFTLMTETYK--IKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLS 398
+ F + + K ++ + + ++ G G +E A K+ M P+ + W ++++
Sbjct: 122 LRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM-HQPNLVAWNAVIT 180
Query: 399 ACRKHGNIEMAKQAAKQIIELDKNES------CGYVLMSNLYAASYQFEE 442
AC + ++ A++ ++ L +N + GY+ L +A F E
Sbjct: 181 ACFRGNDVAGAREIFDKM--LVRNHTSWNVMLAGYIKAGELESAKRIFSE 228
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 332 bits (851), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 176/502 (35%), Positives = 291/502 (57%), Gaps = 12/502 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
+ LK++ + +I +GL+ ++L FCT +++YA +F + PN ++ ++
Sbjct: 37 LNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLT 96
Query: 61 GFSQSSTPRNA--ILLFIDMLVTSPI-QPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+S SS P +A F ++V + +P YP + K+ L A +H + K
Sbjct: 97 AYS-SSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKS 155
Query: 118 GLEFDQFIHNTIIYMYAN-CGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
G + +++ YA+ ++ AR +FDE+ +E +VV+W +M+ G A+ G+I +
Sbjct: 156 GFHLYVVVQTALLHSYASSVSHITLARQLFDEM-SERNVVSWTAMLSGYARSGDISNAVA 214
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLG 235
LF+ M R+ SWN++++ +N F EA+ LFR M E +I+P+E T+V +L+ACA+ G
Sbjct: 215 LFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTG 274
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
++ + IH F + V +++D+Y KCG E A VF KK L+ WNSM+
Sbjct: 275 TLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMIN 334
Query: 296 GLAMNGYENEAIKLFSGLQSSNL---KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
A++G EAI +F + N+ KPD+I+FI +L AC H G V++ + YF LMT +
Sbjct: 335 CFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF 394
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
I+P I+HY C++D LGRAG +EA +++ +M D IWGSLL+AC+ HG++++A+ A
Sbjct: 395 GIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVA 454
Query: 413 AKQIIELDKNESCGYV-LMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVH 471
K ++ L+ N GYV +M+NLY +EEA R ++K K PG S IE+D EVH
Sbjct: 455 VKNLVALNPNNG-GYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVH 513
Query: 472 EFVAGGRLHPKAPEVYLLLNDL 493
+F + + HP+ E+Y++L+ L
Sbjct: 514 QFYSLDKSHPETEEIYMILDSL 535
>sp|Q56X05|PPR15_ARATH Pentatricopeptide repeat-containing protein At1g06145
OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2
Length = 577
Score = 328 bits (842), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 300/524 (57%), Gaps = 37/524 (7%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K L+ A +IKT L +D ++ + CTS ++ A TQ+++PN+F++N + +G
Sbjct: 42 KLLESALAAMIKTSLNQDCRLMNQFITACTS-FKRLDLAVSTMTQMQEPNVFVYNALFKG 100
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
F S P ++ L++ ML S + P TY SL KA + +R G L + K G F
Sbjct: 101 FVTCSHPIRSLELYVRMLRDS-VSPSSYTYSSLVKASS--FASRFGESLQAHIWKFGFGF 157
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSM-------------------- 161
I T+I Y+ G + EAR +FDE+ E D +AW +M
Sbjct: 158 HVKIQTTLIDFYSATGRIREARKVFDEM-PERDDIAWTTMVSAYRRVLDMDSANSLANQM 216
Query: 162 -----------IIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFR 210
I G G ++++ LF++M ++ +SW +MI GY +N +++EA+ +F
Sbjct: 217 SEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFY 276
Query: 211 EMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCG 270
+M E+ I P E TM ++++ACA LG + G+ +H + + N F L+ + +A++DMY KCG
Sbjct: 277 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 336
Query: 271 CPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
ERAL VF +PKK L CWNS++ GLA +G+ EA+K+F+ ++ ++KP+ ++F++V T
Sbjct: 337 SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 396
Query: 331 ACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDA 390
AC H+G V++ + + M + Y I +++HY MV +AGL+ EA +LI +M +P+A
Sbjct: 397 ACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNA 456
Query: 391 IIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLM 450
+IWG+LL CR H N+ +A+ A +++ L+ S Y L+ ++YA ++ + E R M
Sbjct: 457 VIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRM 516
Query: 451 KEVKIEKE-PGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
+E+ IEK PG S I +D H F A + H + EV LLL+++
Sbjct: 517 RELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEI 560
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 327 bits (838), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/501 (35%), Positives = 289/501 (57%), Gaps = 10/501 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAF---CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
+K++A + +G+ + + S ++ C + I+ A +F + NL + N +
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYMKCNA----IDVAKRLFDEYGASNLDLCNAMASN 311
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ + R A+ +F ++++ S ++P R++ S + +QL G HG V++ G E
Sbjct: 312 YVRQGLTREALGVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFES 370
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
I N +I MY C A +FD + + VV WNS++ G + GE+D + F+ M
Sbjct: 371 WDNICNALIDMYMKCHRQDTAFRIFDRMSNK-TVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQ-NIKPSEFTMVSLLNACAKLGAIRQG 240
+N VSWN++ISG V+ F+EA+E+F MQ Q + TM+S+ +AC LGA+
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 241 EWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+WI+ ++ N +L+ + T ++DM+ +CG PE A+ +FN++ + +S W + + +AM
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 301 GYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKH 360
G AI+LF + LKPD ++F+ LTAC+H G V Q K+ F M + + + P H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 361 YSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD 420
Y CMVD LGRAGLLEEA +LI MP +P+ +IW SLL+ACR GN+EMA AA++I L
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLH 480
+ YVL+SN+YA++ ++ + + RL MKE + K PG S I++ G+ HEF +G H
Sbjct: 670 PERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESH 729
Query: 481 PKAPEVYLLLNDLGLLIQEMG 501
P+ P + +L+++ +G
Sbjct: 730 PEMPNIEAMLDEVSQRASHLG 750
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 226/453 (49%), Gaps = 50/453 (11%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAG--DINYAYLVFTQIKK-PNLFIWNT 57
+ +LK H L K GL D ++++A +++A VF + F++N+
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IRG++ S AILLF+ M+ S I P + T+P A A+ +G Q+HG +VK
Sbjct: 105 LIRGYASSGLCNEAILLFLRMM-NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
G D F+ N++++ YA +CGE+D +R++
Sbjct: 164 GYAKDLFVQNSLVHFYA--------------------------------ECGELDSARKV 191
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELF-REMQEQNIKPSEFTMVSLLNACAKLGA 236
FD+M RN VSW SMI GY R K+A++LF R ++++ + P+ TMV +++ACAKL
Sbjct: 192 FDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLED 251
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ GE ++ F+ + E+N ++V+A++DMY KC + A ++F+ L N+M
Sbjct: 252 LETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASN 311
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
G EA+ +F+ + S ++PD IS ++ +++C+ + K Y ++
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKS-----CHGYVLRN 366
Query: 357 SIKHY----SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
+ + + ++D + + A ++ M S+ + W S+++ ++G ++ A +
Sbjct: 367 GFESWDNICNALIDMYMKCHRQDTAFRIFDRM-SNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAME 445
+ + E KN ++S L S FEEA+E
Sbjct: 426 FETMPE--KNIVSWNTIISGLVQGSL-FEEAIE 455
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 325 bits (833), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 301/509 (59%), Gaps = 19/509 (3%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K+ ++IH H++K G D + +++ G + A+ VF + ++ + +I+G
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ-NGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
++ NA LF ++ V + ++ ++ YA+ G ++ +L ++K +
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVV-----SWNAMISGYAETGNYKEALELFKDMMKTNVRP 264
Query: 122 DQFIHNTIIYMYANCGFLSEAR---LMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
D+ T++ A G + R L D+ ++ N++I +KCGE++ + LF
Sbjct: 265 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+++ ++ +SWN++I GY +KEAL LF+EM P++ TM+S+L ACA LGAI
Sbjct: 325 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 239 QGEWIHNFL------VTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
G WIH ++ VTN L T ++IDMY KCG E A QVFN++ K LS WN+
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRT----SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
M+FG AM+G + + LFS ++ ++PD I+F+ +L+AC+HSG ++ + F MT+ Y
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 500
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
K+ P ++HY CM+D LG +GL +EAE++I M +PD +IW SLL AC+ HGN+E+ +
Sbjct: 501 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A+ +I+++ YVL+SN+YA++ ++ E + R L+ + ++K PGCS IE+D VHE
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 620
Query: 473 FVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
F+ G + HP+ E+Y +L ++ +L+++ G
Sbjct: 621 FIIGDKFHPRNREIYGMLEEMEVLLEKAG 649
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 247/455 (54%), Gaps = 39/455 (8%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPAGD-INYAYLVFTQIKKPNLFIWNTI 58
++ L+ IHA +IK GL A S+++ FC SP + + YA VF I++PNL IWNT+
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG + SS P +A+ L++ M ++ + P T+P + K+ A+ ++G Q+HG V+K G
Sbjct: 106 FRGHALSSDPVSALKLYVCM-ISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
+ D ++H ++I MY G L +A +FD+ DVV++ ++I G A G I+ +++LF
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDK-SPHRDVVSYTALIKGYASRGYIENAQKLF 223
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D++ ++ VSWN+MISGY +KEALELF++M + N++P E TMV++++ACA+ G+I
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G +H ++ + F N +V A+ID+Y KCG E A +F +P K + WN+++ G
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYT 343
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK-IKPS 357
EA+ LF + S P+ ++ +++L AC H G ++ + + + K + +
Sbjct: 344 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNA 403
Query: 358 IKHYSCMVDALGRAGLLEEAEKL----------------------------------IRS 383
+ ++D + G +E A ++ +R
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK 463
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ PD I + LLSAC G +++ + + + +
Sbjct: 464 IGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 325 bits (832), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 291/538 (54%), Gaps = 40/538 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ L+ +H+ +I L + +++ S D+ A VF +I + N+ I N +IR
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYAS-LKDVASARKVFDEIPERNVIIINVMIR 113
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ + + +F M + ++P T+P + KA + G G ++HG K GL
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDES------ 174
F+ N ++ MY CGFLSEARL+ DE+ + DVV+WNS+++G A+ D++
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEM-SRRDVVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 175 -------------------------------RRLFDKMVSRNTVSWNSMISGYVRNVKFK 203
+ +F KM ++ VSWN MI Y++N
Sbjct: 232 MESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 291
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
EA+EL+ M+ +P ++ S+L AC A+ G+ IH ++ N ++ A+I
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
DMY KCGC E+A VF + + + W +M+ +G +A+ LFS LQ S L PD I
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
+F+ L AC+H+G + + + F LMT+ YKI P ++H +CMVD LGRAG ++EA + I+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEA 443
M +P+ +WG+LL ACR H + ++ AA ++ +L +S YVL+SN+YA + ++EE
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531
Query: 444 MEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
R +MK ++K PG S +EV+ +H F+ G R HP++ E+Y L+ L ++E+G
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELG 589
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 323 bits (829), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 280/497 (56%), Gaps = 37/497 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASR-ILAFCTSPA--GDINYAYLVFTQIKKPNLFIWNT 57
+ + K++HA IK L ++ +LA C +NYA +F I P F +NT
Sbjct: 43 IDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDPCTFDFNT 102
Query: 58 IIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ 117
+IRG+ + A+ + +M+ +P TYP L KA +L R+G Q+HG+V K
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGN-EPDNFTYPCLLKACTRLKSIREGKQIHGQVFKL 161
Query: 118 GLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRL 177
GLE D F+ N++I MY CG E++ S +
Sbjct: 162 GLEADVFVQNSLINMYGRCG--------------------------------EMELSSAV 189
Query: 178 FDKMVSRNTVSWNSMISGYVRNVKFKEALELFREM-QEQNIKPSEFTMVSLLNACAKLGA 236
F+K+ S+ SW+SM+S + E L LFR M E N+K E MVS L ACA GA
Sbjct: 190 FEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGA 249
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ G IH FL+ N ELN IV T+++DMY KCGC ++AL +F + K+ +++M+ G
Sbjct: 250 LNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISG 309
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
LA++G A+++FS + L+PD++ +++VL AC+HSG V + + F M + K++P
Sbjct: 310 LALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEP 369
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
+ +HY C+VD LGRAGLLEEA + I+S+P + + +IW + LS CR NIE+ + AA+++
Sbjct: 370 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQEL 429
Query: 417 IELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAG 476
++L + Y+L+SNLY+ +++ R + +++ PG S++E+ G+ H FV+
Sbjct: 430 LKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQ 489
Query: 477 GRLHPKAPEVYLLLNDL 493
R HPK E+Y +L+ +
Sbjct: 490 DRSHPKCKEIYKMLHQM 506
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/488 (33%), Positives = 279/488 (57%), Gaps = 3/488 (0%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
++H K DP + + S G INYA VF ++ ++ WNT+I + +
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYAS-CGRINYARNVFDEMSHRDVVTWNTMIERYCRF 190
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFI 125
A LF +M S + P + ++ A + G R ++ +++ + D +
Sbjct: 191 GLVDEAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL 249
Query: 126 HNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
++ MYA G + AR F ++ ++ +M+ G +KCG +D+++ +FD+ ++
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 308
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
V W +MIS YV + +EAL +F EM IKP +M S+++ACA LG + + +W+H+
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHS 368
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+ N E + A+I+MY KCG + VF +P++ + W+SM+ L+M+G ++
Sbjct: 369 CIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASD 428
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+ LF+ ++ N++P+ ++F+ VL C+HSG V + K F MT+ Y I P ++HY CMV
Sbjct: 429 ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMV 488
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D GRA LL EA ++I SMP + +IWGSL+SACR HG +E+ K AAK+I+EL+ +
Sbjct: 489 DLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDG 548
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
VLMSN+YA ++E+ R +M+E + KE G S I+ +G+ HEF+ G + H ++ E
Sbjct: 549 ALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNE 608
Query: 486 VYLLLNDL 493
+Y L+++
Sbjct: 609 IYAKLDEV 616
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 204/436 (46%), Gaps = 68/436 (15%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKP-NLFIWNTII 59
+ +K++HAH+++T + + + +S + +++YA VF+ I P ++N +
Sbjct: 25 LNHIKQLHAHILRT-VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFL 83
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
R S+SS PR A +LF + + + ++ + KA +++ +G +LHG K
Sbjct: 84 RDLSRSSEPR-ATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIAT 142
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F+ + MYA+CG ++ AR +FDE+ + DVV WN+MI + G +DE
Sbjct: 143 LCDPFVETGFMDMYASCGRINYARNVFDEM-SHRDVVTWNTMIERYCRFGLVDE------ 195
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
A +LF EM++ N+ P E + ++++AC + G +R
Sbjct: 196 -------------------------AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRY 230
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQ---------------------- 277
I+ FL+ N ++T ++TA++ MY GC + A +
Sbjct: 231 NRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSK 290
Query: 278 ---------VFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
+F+ KK L CW +M+ + Y EA+++F + S +KPD +S +V
Sbjct: 291 CGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSV 350
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
++AC + G +++AK + ++ + + +++ + G L+ + MP
Sbjct: 351 ISACANLGILDKAK-WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR-R 408
Query: 389 DAIIWGSLLSACRKHG 404
+ + W S+++A HG
Sbjct: 409 NVVSWSSMINALSMHG 424
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 127/282 (45%), Gaps = 14/282 (4%)
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
++ +N + R+ + + + ++ ++ + +F+ + +L A +K+ A+ +G +H
Sbjct: 76 SIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHG 135
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
+ V T +DMY CG A VF+ + + + WN+M+ G +E
Sbjct: 136 VAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDE 195
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A KLF ++ SN+ PD + +++AC +G + + + + E ++ + +V
Sbjct: 196 AFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN-DVRMDTHLLTALV 254
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
AG ++ A + R M S + + +++S K G ++ A+ Q +K +
Sbjct: 255 TMYAGAGCMDMAREFFRKM-SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQT---EKKDLV 310
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVD 467
+ M + Y S +EA+ ++ +E CS I+ D
Sbjct: 311 CWTTMISAYVESDYPQEAL---------RVFEEMCCSGIKPD 343
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/495 (34%), Positives = 290/495 (58%), Gaps = 36/495 (7%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCT-SPA-GDINYAYLVFTQIKKPNLFIWNTI 58
+++L +I A+ IK+ + +D ++++ FCT SP ++YA +F + +P++ I+N++
Sbjct: 42 LRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSM 100
Query: 59 IRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG 118
RG+S+ + P LF+++L I P T+PSL KA A +G QLH +K G
Sbjct: 101 ARGYSRFTNPLEVFSLFVEIL-EDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 159
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
L+ + ++ T+I MY +C ++D +R +F
Sbjct: 160 LDDNVYVCPTLINMYT--------------------------------ECEDVDSARCVF 187
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
D++V V +N+MI+GY R + EAL LFREMQ + +KP+E T++S+L++CA LG++
Sbjct: 188 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD 247
Query: 239 QGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLA 298
G+WIH + + F V TA+IDM+ KCG + A+ +F + K W++M+ A
Sbjct: 248 LGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYA 307
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +++ +F ++S N++PD I+F+ +L AC+H+G+V + + YF+ M + I PSI
Sbjct: 308 NHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSI 367
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
KHY MVD L RAG LE+A + I +P P ++W LL+AC H N+++A++ +++I E
Sbjct: 368 KHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFE 427
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGR 478
LD + YV++SNLYA + ++E R +MK+ K K PGCS IEV+ VHEF +G
Sbjct: 428 LDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDG 487
Query: 479 LHPKAPEVYLLLNDL 493
+ +++ L+++
Sbjct: 488 VKSATTKLHRALDEM 502
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 322 bits (825), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 165/430 (38%), Positives = 257/430 (59%), Gaps = 6/430 (1%)
Query: 55 WNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQL--GLARDGAQLHG 112
W + I +++ A F DM + ++P +T+ +L G G LHG
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAG-VEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 113 RVVKQGLEFDQFIHNT-IIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEI 171
K GL+ + + T II MY+ G +ARL+FD ++ + + V WN+MI G + G++
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDK-NSVTWNTMIDGYMRSGQV 156
Query: 172 DESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNAC 231
D + ++FDKM R+ +SW +MI+G+V+ +EAL FREMQ +KP +++ LNAC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 232 AKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWN 291
LGA+ G W+H ++++ F+ N V ++ID+YC+CGC E A QVF + K+ + WN
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 292 SMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET 351
S++ G A NG +E++ F +Q KPD ++F LTAC+H G V + YF +M
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 352 YKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG-NIEMAK 410
Y+I P I+HY C+VD RAG LE+A KL++SMP P+ ++ GSLL+AC HG NI +A+
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAE 396
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
+ K + +L+ YV++SN+YAA ++E A + R MK + ++K+PG S IE+D +
Sbjct: 397 RLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCM 456
Query: 471 HEFVAGGRLH 480
H F+AG H
Sbjct: 457 HVFMAGDNAH 466
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 44/265 (16%)
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL--GA 236
++ S TVSW S I+ RN + EA + F +M ++P+ T ++LL+ C G+
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 237 IRQGEWIHNFLVTNCFELNTIVV-TAIIDMYCK--------------------------- 268
G+ +H + + N ++V TAII MY K
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 269 ----CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYIS 324
G + A ++F+ +P++ L W +M+ G GY+ EA+ F +Q S +KPDY++
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 325 FIAVLTACNHSGKVNQAKDYFTLMTETY----KIKPSIKHYSCMVDALGRAGLLEEAEKL 380
IA L AC + G ++ F L Y K +++ + ++D R G +E A ++
Sbjct: 209 IIAALNACTNLGALS-----FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 381 IRSMPSDPDAIIWGSLLSACRKHGN 405
+M + W S++ +GN
Sbjct: 264 FYNMEKRT-VVSWNSVIVGFAANGN 287
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 125/312 (40%), Gaps = 67/312 (21%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
+H + K GL ++ + + S G A LVF ++ N WNT+I G+ +S
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 67 TPRNAILLFIDM------------------------------LVTSPIQPQRLTYPSLFK 96
NA +F M + S ++P + +
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
A LG G +H V+ Q + + + N++I +Y CG + AR +F ++ VV
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKR-TVV 273
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
+WNS+I+G A G ES L FR+MQE+
Sbjct: 274 SWNSVIVGFAANGNAHES-------------------------------LVYFRKMQEKG 302
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC-FELNTIV--VTAIIDMYCKCGCPE 273
KP T L AC+ +G + +G + F + C + ++ + ++D+Y + G E
Sbjct: 303 FKPDAVTFTGALTACSHVGLVEEG--LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLE 360
Query: 274 RALQVFNTVPKK 285
AL++ ++P K
Sbjct: 361 DALKLVQSMPMK 372
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 322 bits (824), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 271/462 (58%), Gaps = 10/462 (2%)
Query: 40 AYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYA 99
A F + ++ WNTII G++QS A LF + SP+Q T+ ++ Y
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDV-FTWTAMVSGYI 292
Query: 100 QLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWN 159
Q + + +L ++ E ++ N ++ Y + A+ +FD + +V WN
Sbjct: 293 QNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-NVSTWN 347
Query: 160 SMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP 219
+MI G A+CG+I E++ LFDKM R+ VSW +MI+GY ++ EAL LF +M+ + +
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
+ + S L+ CA + A+ G+ +H LV +E V A++ MYCKCG E A +F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVN 339
+ K + WN+M+ G + +G+ A++ F ++ LKPD + +AVL+AC+H+G V+
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 340 QAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSA 399
+ + YF MT+ Y + P+ +HY+CMVD LGRAGLLE+A L+++MP +PDA IWG+LL A
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Query: 400 CRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEP 459
R HGN E+A+ AA +I ++ S YVL+SNLYA+S ++ + + R+ M++ ++K P
Sbjct: 588 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 647
Query: 460 GCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
G S IE+ + H F G HP+ E++ L +L L +++ G
Sbjct: 648 GYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAG 689
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 228/542 (42%), Gaps = 112/542 (20%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQR--LTYP 92
G+ A +F ++ + +L WN +I+G+ ++ A LF I P+R ++
Sbjct: 109 GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF-------EIMPERDVCSWN 161
Query: 93 SLFKAYAQLGLARDGAQLHGRV-----VKQGLEFDQFIHNTII--------------YMY 133
++ YAQ G D + R+ V ++ N+ + +
Sbjct: 162 TMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS 221
Query: 134 ANC---GFLS-----EARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN 185
NC GF+ EAR FD ++ DVV+WN++I G A+ G+IDE+R+LFD+ ++
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 186 TVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
+W +M+SGY++N +EA ELF +M E+N ++ A L QGE +
Sbjct: 281 VFTWTAMVSGYIQNRMVEEARELFDKMPERN----------EVSWNAMLAGYVQGERMEM 330
Query: 246 ----FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
F V C ++T +I Y +CG A +F+ +PK+ W +M+ G + +G
Sbjct: 331 AKELFDVMPCRNVSTW--NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG 388
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACN---------------------------- 333
+ EA++LF ++ + + SF + L+ C
Sbjct: 389 HSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN 448
Query: 334 -------HSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS 386
G + +A D F M I ++ M+ R G E A + SM
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMA-----GKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 387 D---PDAIIWGSLLSACRKHGNIEMAKQ---AAKQIIELDKNESCGYVLMSNLYAASYQF 440
+ PD ++LSAC G ++ +Q Q + N S Y M +L +
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN-SQHYACMVDLLGRAGLL 562
Query: 441 EEAMEERLLMKEVKIEKEP-------GCSLIEVDGEVHEFVAGG--RLHPKAPEVYLLLN 491
E+A LMK + E + G S + + E+ E A + P+ +Y+LL+
Sbjct: 563 EDAHN---LMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLS 619
Query: 492 DL 493
+L
Sbjct: 620 NL 621
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 179/397 (45%), Gaps = 56/397 (14%)
Query: 30 CTSPAGDINYAYL---VFTQIKKP-----------NLFIWNTIIRGFSQSSTPRNAILLF 75
C + G N+ L TQI+K ++ WN I + ++ A+ +F
Sbjct: 28 CNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVF 87
Query: 76 IDMLVTSPIQPQRLTYPSLFKAYAQLG---LARDGAQLHGRVVKQGLEFDQFIHNTIIYM 132
M S + +Y + Y + G LAR ++ + E D N +I
Sbjct: 88 KRMPRWSSV-----SYNGMISGYLRNGEFELAR-------KLFDEMPERDLVSWNVMIKG 135
Query: 133 YANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSM 192
Y L +AR +F E+ E DV +WN+M+ G A+ G +D++R +FD+M +N VSWN++
Sbjct: 136 YVRNRNLGKARELF-EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
Query: 193 ISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS---LLNACAKLGAIRQG-EWIHNFLV 248
+S YV+N K +EA LF+ + + +VS LL K I + ++ + V
Sbjct: 195 LSAYVQNSKMEEACMLFKSRE-------NWALVSWNCLLGGFVKKKKIVEARQFFDSMNV 247
Query: 249 TNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIK 308
+ NTI+ Y + G + A Q+F+ P + + W +MV G N EA +
Sbjct: 248 RDVVSWNTIITG-----YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 309 LFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDAL 368
LF + N +S+ A+L ++ AK+ F +M ++ ++ M+
Sbjct: 303 LFDKMPERN----EVSWNAMLAGYVQGERMEMAKELFDVMP-----CRNVSTWNTMITGY 353
Query: 369 GRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+ G + EA+ L MP D + W ++++ + G+
Sbjct: 354 AQCGKISEAKNLFDKMPK-RDPVSWAAMIAGYSQSGH 389
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 130/286 (45%), Gaps = 43/286 (15%)
Query: 154 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 213
D+ WN I + G +E+ R+F +M ++VS+N MISGY+RN +F+ A +LF EM
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
E+++ S M+ LG R+ L E + ++ Y + GC +
Sbjct: 123 ERDL-VSWNVMIKGYVRNRNLGKARE-------LFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSG--------------------- 312
A VF+ +P+K WN+++ N EA LF
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 313 -------LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
S N++ D +S+ ++T SGK+++A+ F + ++ + ++ MV
Sbjct: 235 IVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLF----DESPVQ-DVFTWTAMV 288
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
+ ++EEA +L MP + + + W ++L+ + +EMAK+
Sbjct: 289 SGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAGYVQGERMEMAKE 333
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 322 bits (824), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 290/496 (58%), Gaps = 10/496 (2%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
M +K++HAH ++TG+ + R+L ++ YA +F + F++N +I+
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLI-----PNLVYARKLFDHHQNSCTFLYNKLIQ 55
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
+ P +I+L+ ++L ++P T+ +F A A AR LH + + G E
Sbjct: 56 AYYVHHQPHESIVLY-NLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDK 180
D F T+I YA G L AR +FDE+ ++ DV WN+MI G + G++ + LFD
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEM-SKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 181 MVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQ 239
M +N SW ++ISG+ +N + EAL++F M+ ++++KP+ T+VS+L ACA LG +
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLA 298
G + + N F N V A I+MY KCG + A ++F + ++ L WNSM+ LA
Sbjct: 234 GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 299 MNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSI 358
+G +EA+ LF+ + KPD ++F+ +L AC H G V + ++ F M E +KI P +
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKL 353
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+HY CM+D LGR G L+EA LI++MP PDA++WG+LL AC HGN+E+A+ A++ + +
Sbjct: 354 EHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFK 413
Query: 419 LDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS-LIEVDGEVHEFVAGG 477
L+ V+MSN+YAA+ +++ + R LMK+ + K G S +EV +VH+F
Sbjct: 414 LEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVED 473
Query: 478 RLHPKAPEVYLLLNDL 493
+ HP++ E+Y +L ++
Sbjct: 474 KSHPRSYEIYQVLEEI 489
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 321 bits (822), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/554 (31%), Positives = 301/554 (54%), Gaps = 74/554 (13%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
LK+IHA L+ GL ++++ +S GDI +A VF + +P +F WN IIRG+S
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLI-HASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+++ ++A+L++ +M + + P T+P L KA + L + G +H +V + G + D
Sbjct: 96 RNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 124 FIHN---------------------------------TIIYMYANCGFLSEARLMFDEV- 149
F+ N I+ YA G EA +F ++
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 150 --DTEFDVVAWNSMI---------------------IGL--------------AKCGEID 172
D + D VA S++ +GL AKCG++
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 173 ESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACA 232
++ LFDKM S N + WN+MISGY +N +EA+++F EM ++++P ++ S ++ACA
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA 334
Query: 233 KLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNS 292
++G++ Q ++ ++ + + + + +A+IDM+ KCG E A VF+ + + W++
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 293 MVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETY 352
M+ G ++G EAI L+ ++ + P+ ++F+ +L ACNHSG V + +F M + +
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-H 453
Query: 353 KIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQA 412
KI P +HY+C++D LGRAG L++A ++I+ MP P +WG+LLSAC+KH ++E+ + A
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA 513
Query: 413 AKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHE 472
A+Q+ +D + + YV +SNLYAA+ ++ E R+ MKE + K+ GCS +EV G +
Sbjct: 514 AQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEA 573
Query: 473 FVAGGRLHPKAPEV 486
F G + HP+ E+
Sbjct: 574 FRVGDKSHPRYEEI 587
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 220 SEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVF 279
S+ SL+++ ++Q IH L+ + + ++T +I G A QVF
Sbjct: 20 SDSFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVF 76
Query: 280 NTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+ +P+ + WN+++ G + N + +A+ ++S +Q + + PD +F +L AC+
Sbjct: 77 DDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 319 bits (818), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 294/533 (55%), Gaps = 32/533 (6%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRIL---AFCTSP------------------------ 33
M+ KK+H+ ++K GL + ++ +L A C P
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 34 ---AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLT 90
G ++ A F Q+ + ++ WN++I GF+Q A+ +F ML S + P R T
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 91 YPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVD 150
S+ A A L G Q+H +V G + + N +I MY+ CG + AR + ++
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 151 T-EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
T + + + +++ G K G++++++ +F + R+ V+W +MI GY ++ + EA+ LF
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
R M +P+ +T+ ++L+ + L ++ G+ IH V + + V A+I MY K
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 270 GCPERALQVFNTVP-KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G A + F+ + ++ W SM+ LA +G+ EA++LF + L+PD+I+++ V
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
+AC H+G VNQ + YF +M + KI P++ HY+CMVD GRAGLL+EA++ I MP +P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERL 448
D + WGSLLSACR H NI++ K AA++++ L+ S Y ++NLY+A ++EEA + R
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
MK+ +++KE G S IEV +VH F HP+ E+Y+ + + I++MG
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMG 694
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 171/343 (49%), Gaps = 40/343 (11%)
Query: 104 ARDGAQL-HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
R AQL H RV+K GL F ++ N ++ +Y+ G+ AR +FDE+ +WN+++
Sbjct: 29 GRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR-TAFSWNTVL 87
Query: 163 IGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEF 222
+K G++D + FD++ R++VSW +MI GY ++ +A+ + +M ++ I+P++F
Sbjct: 88 SAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQF 147
Query: 223 TMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP---------- 272
T+ ++L + A + G+ +H+F+V N V ++++MY KCG P
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 273 ---------------------ERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFS 311
+ A+ F + ++ + WNSM+ G GY+ A+ +FS
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 312 G-LQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT-LMTETYKIKPSIKHYSCMVDALG 369
L+ S L PD + +VL+AC + K+ K + ++T + I + + ++
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV--LNALISMYS 325
Query: 370 RAGLLEEAEKLIRSMPSDPDAIIWG--SLLSACRKHGNIEMAK 410
R G +E A +LI + D I G +LL K G++ AK
Sbjct: 326 RCGGVETARRLIEQRGT-KDLKIEGFTALLDGYIKLGDMNQAK 367
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 285/495 (57%), Gaps = 36/495 (7%)
Query: 6 KIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQS 65
+ HAH++K GL DP + +++ +S +G ++A +F + ++ W +I GF ++
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSS-SGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 66 STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQG-LEFDQF 124
+ A++ F++M T + +T S+ KA ++ R G +HG ++ G ++ D F
Sbjct: 183 GSASEAMVYFVEMKKTG-VAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
I ++++ MY KC D+++++FD+M SR
Sbjct: 242 IGSSLVDMYG--------------------------------KCSCYDDAQKVFDEMPSR 269
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
N V+W ++I+GYV++ F + + +F EM + ++ P+E T+ S+L+ACA +GA+ +G +H
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH 329
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
+++ N E+NT T +ID+Y KCGC E A+ VF + +K + W +M+ G A +GY
Sbjct: 330 CYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYAR 389
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
+A LF + SS++ P+ ++F+AVL+AC H G V + + F M + ++P HY+CM
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD GR GLLEEA+ LI MP +P ++WG+L +C H + E+ K AA ++I+L + S
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHS 509
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHP-KA 483
Y L++NLY+ S ++E R MK+ ++ K PG S IEV G++ EF+A P ++
Sbjct: 510 GRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLES 569
Query: 484 PEVYLLLNDLGLLIQ 498
++Y L+ +G+ ++
Sbjct: 570 DDLYKTLDTVGVQMR 584
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 315 bits (806), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 166/498 (33%), Positives = 276/498 (55%), Gaps = 33/498 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H+ I++GL D + + S G ++ VF +++ ++ W +I G+ +
Sbjct: 289 KQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348
Query: 65 S-STPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ + AI LF +M+ ++P T+ S FKA L R G Q+ G+ K+GL +
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
+ N++I M+ K +++++R F+ +
Sbjct: 409 SVANSVISMFV--------------------------------KSDRMEDAQRAFESLSE 436
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
+N VS+N+ + G RN+ F++A +L E+ E+ + S FT SLL+ A +G+IR+GE I
Sbjct: 437 KNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQI 496
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H+ +V N V A+I MY KCG + A +VFN + + + W SM+ G A +G+
Sbjct: 497 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFA 556
Query: 304 NEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSC 363
++ F+ + +KP+ ++++A+L+AC+H G V++ +F M E +KIKP ++HY+C
Sbjct: 557 IRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 364 MVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNE 423
MVD L RAGLL +A + I +MP D ++W + L ACR H N E+ K AA++I+ELD NE
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNE 676
Query: 424 SCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKA 483
Y+ +SN+YA + ++EE+ E R MKE + KE GCS IEV ++H+F G HP A
Sbjct: 677 PAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNA 736
Query: 484 PEVYLLLNDLGLLIQEMG 501
++Y L+ L I+ G
Sbjct: 737 HQIYDELDRLITEIKRCG 754
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 194/417 (46%), Gaps = 27/417 (6%)
Query: 19 DPIAASRILAFCTSPA----GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILL 74
D + S +L C G + +A L+ I+ P+ ++N++I +S+S A +
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIE-PDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 75 FIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYA 134
F M + +++ ++ Y G D ++ ++ GL + + + +I +
Sbjct: 120 FETMRRFG--KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS 177
Query: 135 NCGFLSEARL----MFDEVDTEFDVVAWNSMIIGLAKCGE--IDESRRLFDKMVSRNTVS 188
N F+ R+ + E DV S+I K GE + + ++FDKM N V+
Sbjct: 178 NSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVT 236
Query: 189 WNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLV 248
W MI+ ++ +EA+ F +M + +FT+ S+ +ACA+L + G+ +H++ +
Sbjct: 237 WTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 249 TNCFELNTIVVTAIIDMYCKC---GCPERALQVFNTVPKKGLSCWNSMVFGLAMN-GYEN 304
+ L V +++DMY KC G + +VF+ + + W +++ G N
Sbjct: 297 RS--GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 305 EAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYK--IKPSIKHY 361
EAI LFS + +++P++ +F + AC G ++ + ++ + +K + +
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKAC---GNLSDPRVGKQVLGQAFKRGLASNSSVA 411
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ ++ ++ +E+A++ S+ S+ + + + + L ++ N E A + +I E
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESL-SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 164/457 (35%), Positives = 269/457 (58%), Gaps = 6/457 (1%)
Query: 49 KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGA 108
+ N+ WN I+ GF++S + A+++F + P ++T S+ + + G
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMF-QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 109 QLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKC 168
+HG V+KQGL D+ + + +I MY G + +F++ + + N+ I GL++
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEM-MEAGVCNAYITGLSRN 331
Query: 169 GEIDESRRLFD----KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTM 224
G +D++ +F+ + + N VSW S+I+G +N K EALELFREMQ +KP+ T+
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 225 VSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPK 284
S+L AC + A+ G H F V N V +A+IDMY KCG + VFN +P
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 285 KGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY 344
K L CWNS++ G +M+G E + +F L + LKPD+ISF ++L+AC G ++ Y
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 345 FTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
F +M+E Y IKP ++HYSCMV+ LGRAG L+EA LI+ MP +PD+ +WG+LL++CR
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 405 NIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLI 464
N+++A+ AA+++ L+ YVL+SN+YAA + E R M+ + ++K PGCS I
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Query: 465 EVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
+V V+ +AG + HP+ ++ ++++ +++ G
Sbjct: 632 QVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 209/436 (47%), Gaps = 44/436 (10%)
Query: 8 HAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSST 67
HA ++K+G D +++++A S N A LV I P ++ ++++I +++
Sbjct: 38 HARILKSGAQNDGYISAKLIA-SYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKL 96
Query: 68 PRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHN 127
+I +F M I P P+LFK A+L + G Q+H GL+ D F+
Sbjct: 97 FTQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 128 TIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM----VS 183
++ +MY CG + +AR +FD + ++ DVV ++++ A+ G ++E R+ +M +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRM-SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
N VSWN ++SG+ R+ KEA+ +F+++ P + T+ S+L + + G I
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKC-------------------------------GCP 272
H +++ + V++A+IDMY K G
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 273 ERALQVFNTVPKKGLS----CWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
++AL++F ++ + W S++ G A NG + EA++LF +Q + +KP++++ ++
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L AC + + + + + ++ S ++D + G + ++ + MP+
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTK- 452
Query: 389 DAIIWGSLLSACRKHG 404
+ + W SL++ HG
Sbjct: 453 NLVCWNSLMNGFSMHG 468
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 32/234 (13%)
Query: 108 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 167
Q H R++K G + D +I +I Y+N ++A L+ + + + +++S+I L K
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSI-PDPTIYSFSSLIYALTK 93
Query: 168 CGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSL 227
+S +F +M S + P + +L
Sbjct: 94 AKLFTQSIGVFSRMFSHGLI-------------------------------PDSHVLPNL 122
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
CA+L A + G+ IH + +++ V ++ MY +CG A +VF+ + K +
Sbjct: 123 FKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 288 SCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQA 341
++++ A G E +++ S ++SS ++ + +S+ +L+ N SG +A
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEA 236
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
+ H ++ L D + L + G IN + +VF + NL WN+++ GFS
Sbjct: 408 RSTHGFAVRVHLL-DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSM 466
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQ-GLEFDQ 123
+ + +F + L+ + ++P +++ SL A Q+GL +G + + ++ G++
Sbjct: 467 HGKAKEVMSIF-ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRL 525
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMI 162
++ ++ + G L EA + E+ E D W +++
Sbjct: 526 EHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 274/492 (55%), Gaps = 34/492 (6%)
Query: 24 SRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSP 83
++I+A C +GDI+ A VF ++ N WN+++ G S+ + ++ L
Sbjct: 65 NKIIARCVR-SGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSR----MMEAHQLFDEI 119
Query: 84 IQPQRLTYPSLFKAYAQ--------------------------LGLARDGAQLHGR-VVK 116
+P +Y + Y + G AR G R +
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 117 QGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRR 176
+E ++ N +I Y CG L +A F +V VVAW +MI G K +++ +
Sbjct: 180 SMMEKNEVSWNAMISGYIECGDLEKASHFF-KVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 177 LFDKM-VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLG 235
+F M V++N V+WN+MISGYV N + ++ L+LFR M E+ I+P+ + S L C++L
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 236 AIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVF 295
A++ G IH + + + +T++I MYCKCG A ++F + KK + WN+M+
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 296 GLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
G A +G ++A+ LF + + ++PD+I+F+AVL ACNH+G VN YF M YK++
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P HY+CMVD LGRAG LEEA KLIRSMP P A ++G+LL ACR H N+E+A+ AA++
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 478
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVA 475
+++L+ + GYV ++N+YA+ ++E+ R MKE + K PG S IE+ +VH F +
Sbjct: 479 LLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRS 538
Query: 476 GGRLHPKAPEVY 487
R+HP+ ++
Sbjct: 539 SDRIHPELDSIH 550
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 308 bits (789), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 163/457 (35%), Positives = 261/457 (57%), Gaps = 38/457 (8%)
Query: 37 INYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFK 96
+N A+ +F Q+ + N+ W T+I +S+ + A+ L + ML ++P TY S+ +
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLML-RDNVRPNVYTYSSVLR 170
Query: 97 AYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVV 156
+ + D LH ++K+GLE D F+ + +I ++A
Sbjct: 171 SCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFA---------------------- 205
Query: 157 AWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQN 216
K GE +++ +FD+MV+ + + WNS+I G+ +N + ALELF+ M+
Sbjct: 206 ----------KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAG 255
Query: 217 IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERAL 276
+ T+ S+L AC L + G H +V ++ + I+ A++DMYCKCG E AL
Sbjct: 256 FIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDAL 313
Query: 277 QVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSG 336
+VFN + ++ + W++M+ GLA NGY EA+KLF ++SS KP+YI+ + VL AC+H+G
Sbjct: 314 RVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAG 373
Query: 337 KVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSL 396
+ YF M + Y I P +HY CM+D LG+AG L++A KL+ M +PDA+ W +L
Sbjct: 374 LLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTL 433
Query: 397 LSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIE 456
L ACR N+ +A+ AAK++I LD ++ Y L+SN+YA S +++ E R M++ I+
Sbjct: 434 LGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIK 493
Query: 457 KEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDL 493
KEPGCS IEV+ ++H F+ G HP+ EV LN L
Sbjct: 494 KEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQL 530
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 96/213 (45%), Gaps = 5/213 (2%)
Query: 204 EALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAII 263
A++ +Q + T L+ C A+ +G I L N +V +I
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 264 DMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYI 323
+MY K A Q+F+ +P++ + W +M+ + +A++L + N++P+
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 324 SFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRS 383
++ +VL +CN V + ++ E + ++ S ++D + G E+A +
Sbjct: 164 TYSSVLRSCNGMSDVRML--HCGIIKEGLESDVFVR--SALIDVFAKLGEPEDALSVFDE 219
Query: 384 MPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQI 416
M + DAI+W S++ ++ ++A + K++
Sbjct: 220 MVTG-DAIVWNSIIGGFAQNSRSDVALELFKRM 251
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 258/451 (57%), Gaps = 8/451 (1%)
Query: 51 NLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQL 110
N I + RGF Q + L + +V+S I+ TYPS+ +A A GL + G Q+
Sbjct: 255 NAMISGYVNRGFYQEA------LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 111 HGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGE 170
H V+++ +F N+++ +Y CG EAR +F+++ + D+V+WN+++ G G
Sbjct: 309 HAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGH 366
Query: 171 IDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNA 230
I E++ +F +M +N +SW MISG N +E L+LF M+ + +P ++ + +
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 231 CAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCW 290
CA LGA G+ H L+ F+ + A+I MY KCG E A QVF T+P W
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 291 NSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N+++ L +G+ EA+ ++ + ++PD I+ + VLTAC+H+G V+Q + YF M
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 351 TYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAK 410
Y+I P HY+ ++D L R+G +AE +I S+P P A IW +LLS CR HGN+E+
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 411 QAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEV 470
AA ++ L Y+L+SN++AA+ Q+EE R LM++ ++KE CS IE++ +V
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666
Query: 471 HEFVAGGRLHPKAPEVYLLLNDLGLLIQEMG 501
H F+ HP+A VY+ L DLG ++ +G
Sbjct: 667 HTFLVDDTSHPEAEAVYIYLQDLGKEMRRLG 697
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 161/359 (44%), Gaps = 50/359 (13%)
Query: 101 LGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNS 160
L LAR +HG ++ G + I N +I +Y L+ AR +FDE+ +E D +A +
Sbjct: 30 LQLAR---AVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEI-SEPDKIARTT 85
Query: 161 MIIGLAKCGEIDESRRLFDK--MVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
M+ G G+I +R +F+K + R+TV +N+MI+G+ N A+ LF +M+ + K
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 219 PSEFTMVSLLNACAKLGAI-RQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCP----E 273
P FT S+L A + +Q H + + T V A++ +Y KC
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYEN----------------------------- 304
A +VF+ + +K W +M+ G NGY +
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 305 ---EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY--FTLMTETYKIKPSIK 359
EA+++ + SS ++ D ++ +V+ AC +G + K + L E + S
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF----SFH 321
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ +V + G +EA + MP+ D + W +LLS G+I AK K++ E
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPA-KDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 117/299 (39%), Gaps = 64/299 (21%)
Query: 35 GDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDM---------------- 78
G + A +F ++ +L WN ++ G+ S A L+F +M
Sbjct: 334 GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393
Query: 79 --------------LVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ +P + K+ A LG +G Q H +++K G +
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLS 453
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
N +I MYA CG + EAR +F + D V+WN++I L + G
Sbjct: 454 AGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGH-------------- 498
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQG-EWI 243
EA++++ EM ++ I+P T++++L AC+ G + QG ++
Sbjct: 499 -----------------GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF 541
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFGLAMNG 301
+ +ID+ C+ G A V ++P K W +++ G ++G
Sbjct: 542 DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
++ HA L+K G ++A L + G + A VF + + WN +I Q
Sbjct: 437 QQYHAQLLKIGF-DSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQ 495
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG 107
A+ ++ +ML I+P R+T ++ A + GL G
Sbjct: 496 HGHGAEAVDVYEEML-KKGIRPDRITLLTVLTACSHAGLVDQG 537
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 305 bits (781), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 270/497 (54%), Gaps = 34/497 (6%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K+IH + +++G + S L + G + A +F + + N+ WN++I + Q
Sbjct: 256 KEIHGYAMRSGF-DSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
+ P+ A+L+F ML ++P ++ A A LG G +H V+ GL+ +
Sbjct: 315 NENPKEAMLIFQKML-DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 125 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 184
+ N++I MY KC E+D + +F K+ SR
Sbjct: 374 VVNSLISMYC--------------------------------KCKEVDTAASMFGKLQSR 401
Query: 185 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 244
VSWN+MI G+ +N + +AL F +M+ + +KP FT VS++ A A+L +WIH
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 245 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 304
++ +C + N V TA++DMY KCG A +F+ + ++ ++ WN+M+ G +G+
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 305 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 364
A++LF +Q +KP+ ++F++V++AC+HSG V F +M E Y I+ S+ HY M
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 365 VDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNES 424
VD LGRAG L EA I MP P ++G++L AC+ H N+ A++AA+++ EL+ ++
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Query: 425 CGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAP 484
+VL++N+Y A+ +E+ + R+ M + K PGCS++E+ EVH F +G HP +
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSK 701
Query: 485 EVYLLLNDLGLLIQEMG 501
++Y L L I+E G
Sbjct: 702 KIYAFLEKLICHIKEAG 718
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 175/351 (49%), Gaps = 36/351 (10%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILA-FCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
+K+L++I + K GL ++ +++++ FC G ++ A VF I +++T++
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRY--GSVDEAARVFEPIDSKLNVLYHTML 107
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
+GF++ S A+ F+ M ++P + L K R G ++HG +VK G
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDD-VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
D F + MYA KC +++E+R++FD
Sbjct: 167 SLDLFAMTGLENMYA--------------------------------KCRQVNEARKVFD 194
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
+M R+ VSWN++++GY +N + ALE+ + M E+N+KPS T+VS+L A + L I
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G+ IH + + + F+ + TA++DMY KCG E A Q+F+ + ++ + WNSM+
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTE 350
N EA+ +F + +KP +S + L AC G + + + L E
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Score = 115 bits (289), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 123/239 (51%), Gaps = 2/239 (0%)
Query: 167 KCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVS 226
+ G +DE+ R+F+ + S+ V +++M+ G+ + +AL+ F M+ +++P +
Sbjct: 81 RYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY 140
Query: 227 LLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKG 286
LL C +R G+ IH LV + F L+ +T + +MY KC A +VF+ +P++
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 287 LSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFT 346
L WN++V G + NG A+++ + NLKP +I+ ++VL A + ++ K+
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 347 LMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN 405
+ + + +VD + G LE A +L M + + + W S++ A ++ N
Sbjct: 261 YAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGML-ERNVVSWNSMIDAYVQNEN 317
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 94/210 (44%), Gaps = 8/210 (3%)
Query: 212 MQEQNIKPS---EFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCK 268
+ E+N P+ E LL C+ L +RQ I + N T ++ ++C+
Sbjct: 25 LSERNYIPANVYEHPAALLLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCR 81
Query: 269 CGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAV 328
G + A +VF + K +++M+ G A ++A++ F ++ +++P +F +
Sbjct: 82 YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYL 141
Query: 329 LTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDP 388
L C ++ K+ L+ ++ + + + + + + EA K+ MP +
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKS-GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ER 199
Query: 389 DAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
D + W ++++ ++G MA + K + E
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 304 bits (779), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 170/502 (33%), Positives = 286/502 (56%), Gaps = 36/502 (7%)
Query: 2 KDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
K LKKIHA +++TG ++ +++L GD+ YA VF ++ KP +F+WNT+ +G
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVV-IGDMCYARQVFDEMHKPRIFLWNTLFKG 83
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ ++ P ++LL+ M ++P TYP + KA +QLG G LH VVK G
Sbjct: 84 YVRNQLPFESLLLYKKMRDLG-VRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGC 142
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ ++ MY G LS A EF LF+ M
Sbjct: 143 LGIVATELVMMYMKFGELSSA---------EF-----------------------LFESM 170
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
++ V+WN+ ++ V+ ALE F +M ++ FT+VS+L+AC +LG++ GE
Sbjct: 171 QVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGE 230
Query: 242 WIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNG 301
I++ + N IV A +DM+ KCG E A +F + ++ + W++M+ G AMNG
Sbjct: 231 EIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNG 290
Query: 302 YENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTET--YKIKPSIK 359
EA+ LF+ +Q+ L+P+Y++F+ VL+AC+H+G VN+ K YF+LM ++ ++P +
Sbjct: 291 DSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKE 350
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIEL 419
HY+CMVD LGR+GLLEEA + I+ MP +PD IWG+LL AC H ++ + ++ A ++E
Sbjct: 351 HYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVET 410
Query: 420 DKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRL 479
+ +VL+SN+YAA+ +++ + R M+++ +K S +E +G++H F G +
Sbjct: 411 APDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKS 470
Query: 480 HPKAPEVYLLLNDLGLLIQEMG 501
HP++ +Y L+++ I++MG
Sbjct: 471 HPQSKAIYEKLDEILKKIRKMG 492
>sp|Q38959|PP257_ARATH Pentatricopeptide repeat-containing protein At3g26630,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-A6 PE=2
SV=1
Length = 455
Score = 303 bits (775), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/387 (38%), Positives = 235/387 (60%), Gaps = 3/387 (0%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
LK+IH +IK L D + ++++ +S G+ YA LVF Q++ P+ F WN +IR S
Sbjct: 36 LKQIHTKIIKHNLTNDQLLVRQLIS-VSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLS 94
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+ PR A+LLFI M+++ Q + T+P + KA R G Q+HG +K G D
Sbjct: 95 VNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDV 154
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVS 183
F NT++ +Y CG R +FD++ +V+W +M+ GL ++D + +F++M
Sbjct: 155 FFQNTLMDLYFKCGKPDSGRKVFDKMPGR-SIVSWTTMLYGLVSNSQLDSAEIVFNQMPM 213
Query: 184 RNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWI 243
RN VSW +MI+ YV+N + EA +LFR MQ ++KP+EFT+V+LL A +LG++ G W+
Sbjct: 214 RNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWV 273
Query: 244 HNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYE 303
H++ N F L+ + TA+IDMY KCG + A +VF+ + K L+ WNSM+ L ++G
Sbjct: 274 HDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCG 333
Query: 304 NEAIKLF-SGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYS 362
EA+ LF + ++++PD I+F+ VL+AC ++G V YFT M + Y I P +H +
Sbjct: 334 EEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNA 393
Query: 363 CMVDALGRAGLLEEAEKLIRSMPSDPD 389
CM+ L +A +E+A L+ SM SDPD
Sbjct: 394 CMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 66/317 (20%)
Query: 169 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ-EQNIKPSEFTMVSL 227
GE + +F+++ S +T +WN MI N K +EAL LF M + +FT +
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV 125
Query: 228 LNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGL 287
+ AC +IR G +H + F + ++D+Y KCG P+ +VF+ +P + +
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI 185
Query: 288 SCWNSMVFGLAMNGY-------------------------------ENEAIKLFSGLQSS 316
W +M++GL N +EA +LF +Q
Sbjct: 186 VSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD 245
Query: 317 NLKPDYISFIAVLTACNHSGKVNQAK---DY-----FTL-----------------MTET 351
++KP+ + + +L A G ++ + DY F L + +
Sbjct: 246 DVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDA 305
Query: 352 YKI-----KPSIKHYSCMVDALGRAGLLEEAEKLIRSMPS----DPDAIIWGSLLSACRK 402
K+ S+ ++ M+ +LG G EEA L M +PDAI + +LSAC
Sbjct: 306 RKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACAN 365
Query: 403 HGNIEMAKQAAKQIIEL 419
GN++ + ++I++
Sbjct: 366 TGNVKDGLRYFTRMIQV 382
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 301 bits (772), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/496 (34%), Positives = 278/496 (56%), Gaps = 34/496 (6%)
Query: 7 IHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSS 66
IH++ IK GL + +++++ + G + VF ++ +L WN+II+ + +
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDL-YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNE 327
Query: 67 TPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIH 126
P AI LF +M + S IQP LT SL +QLG R + G +++G
Sbjct: 328 QPLRAISLFQEMRL-SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW------- 379
Query: 127 NTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNT 186
FL D+ N++++ AK G +D +R +F+ + + +
Sbjct: 380 -----------FLE-------------DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDV 415
Query: 187 VSWNSMISGYVRNVKFKEALELFREMQEQN-IKPSEFTMVSLLNACAKLGAIRQGEWIHN 245
+SWN++ISGY +N EA+E++ M+E+ I ++ T VS+L AC++ GA+RQG +H
Sbjct: 416 ISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHG 475
Query: 246 FLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENE 305
L+ N L+ VVT++ DMY KCG E AL +F +P+ WN+++ +G+ +
Sbjct: 476 RLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEK 535
Query: 306 AIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMV 365
A+ LF + +KPD+I+F+ +L+AC+HSG V++ + F +M Y I PS+KHY CMV
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMV 595
Query: 366 DALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESC 425
D GRAG LE A K I+SM PDA IWG+LLSACR HGN+++ K A++ + E++
Sbjct: 596 DMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVG 655
Query: 426 GYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPE 485
+VL+SN+YA++ ++E E R + + K PG S +EVD +V F G + HP E
Sbjct: 656 YHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEE 715
Query: 486 VYLLLNDLGLLIQEMG 501
+Y L L ++ +G
Sbjct: 716 MYRELTALQAKLKMIG 731
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 202/420 (48%), Gaps = 46/420 (10%)
Query: 3 DLKKIHAHLIKTGLAKDP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRG 61
D KIH +K G D +AAS I + A + A ++F ++ ++ WN +I G
Sbjct: 168 DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA--VGNARILFDEMPVRDMGSWNAMISG 225
Query: 62 FSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEF 121
+ QS + A+ L + + T SL A + G G +H +K GLE
Sbjct: 226 YCQSGNAKEALTLSNGLRAMDSV-----TVVSLLSACTEAGDFNRGVTIHSYSIKHGLES 280
Query: 122 DQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKM 181
+ F+ N +I +YA EF G + + +++FD+M
Sbjct: 281 ELFVSNKLIDLYA-----------------EF---------------GRLRDCQKVFDRM 308
Query: 182 VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGE 241
R+ +SWNS+I Y N + A+ LF+EM+ I+P T++SL + ++LG IR
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 242 WIHNFLVTNCFELNTIVV-TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMN 300
+ F + + L I + A++ MY K G + A VFN +P + WN+++ G A N
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 301 GYENEAIKLFSGL-QSSNLKPDYISFIAVLTACNHSGKVNQA-KDYFTLMTETYKIKPSI 358
G+ +EAI++++ + + + + ++++VL AC+ +G + Q K + L+ + +
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 359 KHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIE 418
+ + D G+ G LE+A L +P +++ W +L++ HG+ E A K++++
Sbjct: 489 --VTSLADMYGKCGRLEDALSLFYQIPR-VNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 192/407 (47%), Gaps = 47/407 (11%)
Query: 1 MKDLKKIHAHLIKTGLAKDP-IAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTII 59
++ K +HA L+ + ++ I+A + +C G++ A F I+ +++ WN +I
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCY--LGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGL 119
G+ ++ I F +++S + P T+PS+ KA + DG ++H +K G
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV---IDGNKIHCLALKFGF 181
Query: 120 EFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFD 179
+D ++ ++I++Y+ + AR++FDE+ D+ +WN+M
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAM------------------ 222
Query: 180 KMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQ 239
ISGY ++ KEAL L ++ + T+VSLL+AC + G +
Sbjct: 223 -------------ISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNR 265
Query: 240 GEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAM 299
G IH++ + + E V +ID+Y + G +VF+ + + L WNS++ +
Sbjct: 266 GVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYEL 325
Query: 300 NGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDY--FTLMTETYKIKPS 357
N AI LF ++ S ++PD ++ I++ + + G + + FTL + +
Sbjct: 326 NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT 385
Query: 358 IKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHG 404
I + +V + GL++ A + +P + D I W +++S ++G
Sbjct: 386 IG--NAVVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISGYAQNG 429
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 151/334 (45%), Gaps = 40/334 (11%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIR 60
++ + + ++ G + I + + G ++ A VF + ++ WNTII
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIIS 423
Query: 61 GFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLE 120
G++Q+ AI ++ M I + T+ S+ A +Q G R G +LHGR++K GL
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY 483
Query: 121 FDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMII--GLAKCGEIDESRRLF 178
D F+ ++ MY CG L +A +F ++ + V WN++I G GE
Sbjct: 484 LDVFVVTSLADMYGKCGRLEDALSLFYQI-PRVNSVPWNTLIACHGFHGHGE-------- 534
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+A+ LF+EM ++ +KP T V+LL+AC+ G +
Sbjct: 535 -------------------------KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 239 QGEWIHNFLVTNCFELNTIV-VTAIIDMYCKCGCPERALQVFNTVP-KKGLSCWNSMVFG 296
+G+W + T+ ++ ++DMY + G E AL+ ++ + S W +++
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLT 330
++G N + + ++P+++ + +L+
Sbjct: 630 CRVHG--NVDLGKIASEHLFEVEPEHVGYHVLLS 661
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 301 bits (771), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 290/499 (58%), Gaps = 9/499 (1%)
Query: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDIN-YAYLVFTQIKKPNLFIWNTII 59
+ +K+IH H+++ GL + ++++ T ++ YA V ++ N F+W +I
Sbjct: 62 LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVI 121
Query: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QG 118
RG++ AI ++ + I P T+ +L KA + G Q H + + +G
Sbjct: 122 RGYAIEGKFDEAIAMY-GCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRG 180
Query: 119 LEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLF 178
F ++ NT+I MY C + AR +FDE+ E DV++W +I A+ G ++ + LF
Sbjct: 181 FCF-VYVGNTMIDMYVKCESIDCARKVFDEM-PERDVISWTELIAAYARVGNMECAAELF 238
Query: 179 DKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIR 238
+ + +++ V+W +M++G+ +N K +EALE F M++ I+ E T+ ++ACA+LGA +
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 239 QGEWIHNFLVTNCFELNTIVV--TAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ + + + VV +A+IDMY KCG E A+ VF ++ K + ++SM+ G
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 297 LAMNGYENEAIKLFSGLQS-SNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK 355
LA +G EA+ LF + + + +KP+ ++F+ L AC+HSG V+Q + F M +T+ ++
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQ 418
Query: 356 PSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQ 415
P+ HY+CMVD LGR G L+EA +LI++M +P +WG+LL ACR H N E+A+ AA+
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEH 478
Query: 416 IIELDKNESCGYVLMSNLYAASYQFEEAMEERLLMKEVKIEKEPGCS-LIEVDGEVHEFV 474
+ EL+ + Y+L+SN+YA++ + + R L+KE ++K P S +++ +G++H+F
Sbjct: 479 LFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFF 538
Query: 475 AGGRLHPKAPEVYLLLNDL 493
G HP + ++ L +L
Sbjct: 539 PGNLNHPMSNKIQDKLEEL 557
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/418 (38%), Positives = 248/418 (59%), Gaps = 10/418 (2%)
Query: 89 LTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCG---FLSEARLM 145
+++ S+FKAY+ G A D L+ ++++ + D +T I + A+C L++ RL+
Sbjct: 222 VSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDL---STFINLAASCQNPETLTQGRLI 278
Query: 146 FDE---VDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKF 202
+ T+ D+ A N+ I +K + +R LFD M SR VSW MISGY
Sbjct: 279 HSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM 338
Query: 203 KEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFL-VTNCFELNTIVVTA 261
EAL LF M + KP T++SL++ C K G++ G+WI + C N ++ A
Sbjct: 339 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNA 398
Query: 262 IIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPD 321
+IDMY KCG A +F+ P+K + W +M+ G A+NG EA+KLFS + + KP+
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPN 458
Query: 322 YISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLI 381
+I+F+AVL AC HSG + + +YF +M + Y I P + HYSCMVD LGR G LEEA +LI
Sbjct: 459 HITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELI 518
Query: 382 RSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFE 441
R+M + PDA IWG+LL+AC+ H N+++A+QAA+ + L+ + YV M+N+YAA+ ++
Sbjct: 519 RNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWD 578
Query: 442 EAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQE 499
R +MK+ I+K PG S+I+V+G+ H F G H + +Y LN L L ++
Sbjct: 579 GFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSLFAKD 636
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 194/453 (42%), Gaps = 44/453 (9%)
Query: 7 IHAHLIKTGLAKDPI---AASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
+HAHLIK+ D A + C S ++YA VF ++ + + WN ++ GF
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNS----VDYAAKVFERMPERDATTWNAMLSGFC 129
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
QS A LF +M + + I P +T +L ++ + + +H ++ G++
Sbjct: 130 QSGHTDKAFSLFREMRL-NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV 188
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDT-EFDVVAWNSMIIGLAKCGEIDESRRLFDKMV 182
+ NT I Y CG L A+L+F+ +D + VV+WNSM + GE FD
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA------FD--- 239
Query: 183 SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEW 242
A L+ M + KP T ++L +C + QG
Sbjct: 240 ----------------------AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRL 277
Query: 243 IHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGY 302
IH+ + + + + I MY K A +F+ + + W M+ G A G
Sbjct: 278 IHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGD 337
Query: 303 ENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIK-PSIKHY 361
+EA+ LF + S KPD ++ +++++ C G + K + + Y K ++
Sbjct: 338 MDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK-WIDARADIYGCKRDNVMIC 396
Query: 362 SCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELD- 420
+ ++D + G + EA + + P + + W ++++ +G A + ++I+LD
Sbjct: 397 NALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDY 455
Query: 421 KNESCGYVLMSNLYAASYQFEEAMEERLLMKEV 453
K ++ + A S E+ E +MK+V
Sbjct: 456 KPNHITFLAVLQACAHSGSLEKGWEYFHIMKQV 488
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 2/226 (0%)
Query: 175 RRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKL 234
RRL+ + +WN I V E+L LFREM+ +P+ FT + ACA+L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 235 GAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMV 294
+ E +H L+ + F + V TA +DM+ KC + A +VF +P++ + WN+M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 295 FGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKI 354
G +G+ ++A LF ++ + + PD ++ + ++ + + + + + +
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR-LGV 184
Query: 355 KPSIKHYSCMVDALGRAGLLEEAEKLIRSMP-SDPDAIIWGSLLSA 399
+ + + G+ G L+ A+ + ++ D + W S+ A
Sbjct: 185 DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840
OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 298/532 (56%), Gaps = 40/532 (7%)
Query: 4 LKKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFS 63
L+ +HA +++ G+ +AA L C+S +Y+ +F ++ N F+ N +IRG +
Sbjct: 45 LRHVHAQILRRGVLSSRVAAQ--LVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLT 102
Query: 64 QSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQ 123
+++ +++ FI ML ++P RLT+P + K+ ++LG G LH +K ++ D
Sbjct: 103 ENARFESSVRHFILMLRLG-VKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDS 161
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDT-------------------------------- 151
F+ +++ MYA G L A +F+E
Sbjct: 162 FVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRS 221
Query: 152 --EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
E + +W+++I G GE++ +++LF+ M +N VSW ++I+G+ + ++ A+ +
Sbjct: 222 MPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTY 281
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
EM E+ +KP+E+T+ ++L+AC+K GA+ G IH +++ N +L+ + TA++DMY KC
Sbjct: 282 FEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKC 341
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G + A VF+ + K + W +M+ G A++G ++AI+ F + S KPD + F+AVL
Sbjct: 342 GELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
TAC +S +V+ ++F M Y I+P++KHY +VD LGRAG L EA +L+ +MP +PD
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPD 461
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCG-YVLMSNLYAASYQFEEAMEERL 448
W +L AC+ H A+ ++ ++ELD E CG Y+ + +A+ ++ + RL
Sbjct: 462 LTTWAALYRACKAHKGYRRAESVSQNLLELDP-ELCGSYIFLDKTHASKGNIQDVEKRRL 520
Query: 449 LMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLND-LGLLIQE 499
+++ E+ G S IE+DG++++F AG H E+ L L++ + L IQ+
Sbjct: 521 SLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQK 572
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 92/232 (39%), Gaps = 39/232 (16%)
Query: 214 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPE 273
++ P E +SL++AC ++R +H ++ L++ V ++ P+
Sbjct: 22 DRQASPDESHFISLIHACKDTASLRH---VHAQILRRGV-LSSRVAAQLVSCSSLLKSPD 77
Query: 274 RALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACN 333
+L +F ++ N+++ GL N +++ F + +KPD ++F VL + +
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 334 HSG--------------------------------KVNQAKDYFTLMTETYK--IKPSIK 359
G K Q K F + E+ K SI
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 360 HYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQ 411
++ +++ RA + A L RSMP + ++ W +L+ G + AKQ
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSMP-ERNSGSWSTLIKGYVDSGELNRAKQ 248
>sp|Q1PEU4|PP201_ARATH Pentatricopeptide repeat-containing protein At2g44880
OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2
Length = 555
Score = 299 bits (766), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 291/541 (53%), Gaps = 69/541 (12%)
Query: 24 SRILAFCTSPAGDINYAYLVFTQ-IKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTS 82
++ L S G I YA +F Q ++ + F+ N++I+ + ++ ++ L+ D+ +
Sbjct: 14 TKFLVISASAVG-IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKET 72
Query: 83 PIQPQRLTYPSLFKA--------------------------------------YAQLGLA 104
P T+ +L K+ + ++G A
Sbjct: 73 CFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCA 132
Query: 105 RDG-------------AQLHGRVVKQGLE-----FDQF-------IHNTIIYMYANCGFL 139
R+ A + G + L+ FDQ I+N ++ + G +
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDM 192
Query: 140 SEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRN 199
+ AR +FDE+ T V+ W +MI G +ID +R+LFD M RN VSWN+MI GY +N
Sbjct: 193 TSARRLFDEM-THKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQN 251
Query: 200 VKFKEALELFREMQ-EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIV 258
+ +E + LF+EMQ ++ P + T++S+L A + GA+ GEW H F+ + V
Sbjct: 252 KQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKV 311
Query: 259 VTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 318
TAI+DMY KCG E+A ++F+ +P+K ++ WN+M+ G A+NG A+ LF +
Sbjct: 312 CTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE- 370
Query: 319 KPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAE 378
KPD I+ +AV+TACNH G V + + +F +M E + I+HY CMVD LGRAG L+EAE
Sbjct: 371 KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAE 429
Query: 379 KLIRSMPSDPDAIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASY 438
LI +MP +P+ II S LSAC ++ +IE A++ K+ +EL+ YVL+ NLYAA
Sbjct: 430 DLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADK 489
Query: 439 QFEEAMEERLLMKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEVYLLLNDLGLLIQ 498
++++ + +M++ + +KE GCSLIE++ V EF++G HP ++L+L DL + +
Sbjct: 490 RWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMN 549
Query: 499 E 499
E
Sbjct: 550 E 550
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 123/254 (48%), Gaps = 19/254 (7%)
Query: 148 EVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRN-TVSWNSMISGYVRNVKFKEAL 206
++ T+F V++ +++ IG A R+LFD+ R+ + NSMI Y+ ++ ++
Sbjct: 11 QIFTKFLVISASAVGIGYA--------RKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSF 62
Query: 207 ELFREMQEQN-IKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDM 265
L+R+++++ P FT +L +C+ + QG +H+ + F + V T ++DM
Sbjct: 63 ALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDM 122
Query: 266 YCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISF 325
Y K G A F+ +P + W +++ G G + A KLF Q ++K D + +
Sbjct: 123 YAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFD--QMPHVK-DVVIY 179
Query: 326 IAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMP 385
A++ SG + A+ F MT ++ ++ M+ ++ A KL +MP
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTH-----KTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 386 SDPDAIIWGSLLSA 399
+ + + W +++
Sbjct: 235 -ERNLVSWNTMIGG 247
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 298 bits (764), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 261/457 (57%), Gaps = 34/457 (7%)
Query: 30 CTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRL 89
C P G I+ VF + + ++ +NTII G++QS +A+ + +M T+ ++P
Sbjct: 186 CIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSF 243
Query: 90 TYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEV 149
T S+ +++ G ++HG V+++G++ D +I ++++ MYA
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYA--------------- 288
Query: 150 DTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELF 209
K I++S R+F ++ R+ +SWNS+++GYV+N ++ EAL LF
Sbjct: 289 -----------------KSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLF 331
Query: 210 REMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKC 269
R+M +KP S++ ACA L + G+ +H +++ F N + +A++DMY KC
Sbjct: 332 RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 391
Query: 270 GCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNLKPDYISFIAVL 329
G + A ++F+ + W +++ G A++G+ +EA+ LF ++ +KP+ ++F+AVL
Sbjct: 392 GNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVL 451
Query: 330 TACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPD 389
TAC+H G V++A YF MT+ Y + ++HY+ + D LGRAG LEEA I M +P
Sbjct: 452 TACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPT 511
Query: 390 AIIWGSLLSACRKHGNIEMAKQAAKQIIELDKNESCGYVLMSNLYAASYQFEEAMEERLL 449
+W +LLS+C H N+E+A++ A++I +D YVLM N+YA++ +++E + RL
Sbjct: 512 GSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLR 571
Query: 450 MKEVKIEKEPGCSLIEVDGEVHEFVAGGRLHPKAPEV 486
M++ + K+P CS IE+ + H FV+G R HP ++
Sbjct: 572 MRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKI 608
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 219/426 (51%), Gaps = 25/426 (5%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++HA I+T + +AS +++ T+ ++ A L+F +K P + W ++IR F+
Sbjct: 25 KQLHAQFIRTQ-SLSHTSASIVISIYTNLK-LLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVKQGLEFDQF 124
S A+ F++M + P +PS+ K+ + R G +HG +V+ G++ D +
Sbjct: 83 QSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 125 IHNTIIYMYANC-GFLSEARL--MFDEV-----DTEFDVVAWNSMIIGLAKCGEIDESRR 176
N ++ MYA G S+ + +FDE+ ++ + V + I+ ID RR
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG----IDSVRR 197
Query: 177 LFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGA 236
+F+ M ++ VS+N++I+GY ++ +++AL + REM ++KP FT+ S+L ++
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 237 IRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFG 296
+ +G+ IH +++ + + + ++++DMY K E + +VF+ + + WNS+V G
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 297 LAMNGYENEAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKP 356
NG NEA++LF + ++ +KP ++F +V+ AC H ++ K +
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG-GFGS 376
Query: 357 SIKHYSCMVDALGRAGLLEEAEKLIRSMPSDPDAIIWGSLLSACRKHGN--------IEM 408
+I S +VD + G ++ A K+ M + D + W +++ HG+ EM
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRM-NVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 409 AKQAAK 414
+Q K
Sbjct: 436 KRQGVK 441
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 98/218 (44%), Gaps = 6/218 (2%)
Query: 5 KKIHAHLIKTGLAKDPIAASRILAFCTSPAGDINYAYLVFTQIKKPNLFIWNTIIRGFSQ 64
K++H ++++ G + AS ++ S G+I A +F ++ + W II G +
Sbjct: 363 KQLHGYVLRGGFGSNIFIASALVDM-YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 65 SSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDGAQLHGRVVK-QGLEFDQ 123
A+ LF +M ++P ++ + ++ A + +GL + + K GL +
Sbjct: 422 HGHGHEAVSLFEEMK-RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 124 FIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMV- 182
+ + + G L EA ++ E W++++ + ++ + ++ +K+
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Query: 183 --SRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIK 218
S N ++ M + Y N ++KE +L M+++ ++
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLR 578
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 178,389,643
Number of Sequences: 539616
Number of extensions: 7131893
Number of successful extensions: 24442
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 16008
Number of HSP's gapped (non-prelim): 2035
length of query: 502
length of database: 191,569,459
effective HSP length: 122
effective length of query: 380
effective length of database: 125,736,307
effective search space: 47779796660
effective search space used: 47779796660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)