BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046041
(531 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 222/492 (45%), Gaps = 36/492 (7%)
Query: 41 LRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALV 100
LR K + PE G WP++GH+ LG + H L M+ +YG + I+IG LV
Sbjct: 7 LRPRVPKGLKSPPEPWG-WPLLGHVLTLG--KNPHLALSRMSQRYGDVLQIRIGSTPVLV 63
Query: 101 VSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIA-----TL 155
+S + ++ L F RP ++ S+ + G W R++A T
Sbjct: 64 LSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTF 123
Query: 156 ELLSNHRLEKLRHVRDY---EVKTCLKELYELWDKS---KSTNKMLVEMKRWFADTIRNV 209
+ S+ ++ ++ E K + L EL N+++V ++ NV
Sbjct: 124 SIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVV--------SVANV 175
Query: 210 ILRMIVGKGCNSVDSEEWMELLTR---FLEMSGKFVVSDALPFLRWLDIGGDERSMKKTA 266
I M G+ S+E + L+ F+E + D P LR+L +R K
Sbjct: 176 IGAMCFGQHFPE-SSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQR-FKAFN 233
Query: 267 KELDIVVQGWFEEHKRKRDS---REVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVC 323
+ +Q +EH + D R++ G P G+ + V+ +N
Sbjct: 234 QRFLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQE-KIVNLVND--- 289
Query: 324 LGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQAT 383
+ AG DT T ++W + L+ +I K+Q ELD +G +R+ SD L YL+A
Sbjct: 290 --IFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAF 347
Query: 384 LKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPER 443
+ E R +P IPH + T+NG+++P + + +N W++ DP +WE+P +F+PER
Sbjct: 348 ILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPER 407
Query: 444 FLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDM 503
FLT + +++ FG G+R C G A + +A LLQ +F+ P +D+
Sbjct: 408 FLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDL 467
Query: 504 GEGFGLTMEKSR 515
+GLTM+ +R
Sbjct: 468 TPIYGLTMKHAR 479
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 225/475 (47%), Gaps = 31/475 (6%)
Query: 48 KKRGA--PEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALVVSSWE 105
KK GA P++ + P++G L L +H + KYGPI+++++G ++V +
Sbjct: 3 KKTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQ 62
Query: 106 MAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIA--TLELL--SNH 161
+AKE L K F+ RP+ ++I N F+ G++W R++A T L +
Sbjct: 63 LAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQ 122
Query: 162 RLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNS 221
+LEK+ +E+ L D + N +++ + NVI + +
Sbjct: 123 KLEKI----------ICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKN 172
Query: 222 VDSEEWMELLTRFLEMSGKFVVSDAL-PFLRWLDIGGDE--RSMKKTAKELDIVVQGWFE 278
D E + ++ + E + D+L + WL I ++ +K K + ++ E
Sbjct: 173 GDPE--LNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILE 230
Query: 279 EHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDT-----INKAVCLGLII-AGLD 332
+K K S + LD ++M + + +G D D+ + +G I AG++
Sbjct: 231 NYKEKFRSDSITNM-LD--TLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVE 287
Query: 333 TTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYP 392
TTT + W ++ LL++ + K+ E+D VG R SD L+ L+AT++E +RL P
Sbjct: 288 TTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRP 347
Query: 393 AVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDID 452
P+LIPH+A + ++ + V T+++IN+W L + + W +P +F PERFL
Sbjct: 348 VAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNP-AGTQ 406
Query: 453 VRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGF 507
+ + LPFG+G R C G A Q + +A LLQ FD P + L EG
Sbjct: 407 LISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGI 461
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 216/486 (44%), Gaps = 24/486 (4%)
Query: 41 LRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALV 100
+ K TS K P WP+IGH+ LG + H L M+ +YG + I+IG +V
Sbjct: 1 MAKKTSSKGLKNPPGPWGWPLIGHMLTLG--KNPHLALSRMSQQYGDVLQIRIGSTPVVV 58
Query: 101 VSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSP-YGSYWCETRKIA-----T 154
+S + ++ L F RP ++ SM FSP G W R++A +
Sbjct: 59 LSGLDTIRQALVRQGDDFKGRPDLYTFTLISNGQSM-SFSPDSGPVWAARRRLAQNGLKS 117
Query: 155 LELLSNHRLEKLRHVRDY---EVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVIL 211
+ S+ ++ ++ E + + L EL N R+ ++ NVI
Sbjct: 118 FSIASDPASSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPY-----RYVVVSVTNVIC 172
Query: 212 RMIVGK--GCNSVDSEEWMELLTRFLEMSGKFVVSDALPFLRWLDIGGDERSMKKTAKEL 269
+ G+ N + + L F E+ G +D +P LR+L + K ++
Sbjct: 173 AICFGRRYDHNHQELLSLVNLNNNFGEVVGSGNPADFIPILRYLP-NPSLNAFKDLNEKF 231
Query: 270 DIVVQGWFEEHKRKRDSREVKGEELDFMS-VMPSILGDTEQYSGRDVDTINKAVCLGLII 328
+Q +EH + + ++ + L + D IN + L L
Sbjct: 232 YSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIIN--IVLDLFG 289
Query: 329 AGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAM 388
AG DT T ++W + L+ + + K+Q ELD +G R+ SD +L Y++A + E
Sbjct: 290 AGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETF 349
Query: 389 RLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKH 448
R VP IPH + ++ G+++P + +N W++ D ++W P +F PERFLT
Sbjct: 350 RHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPD 409
Query: 449 KDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFG 508
ID + +++ FG G+R C G + A + +A LLQ +F+ P +DM +G
Sbjct: 410 GAID-KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIYG 468
Query: 509 LTMEKS 514
LTM+ +
Sbjct: 469 LTMKHA 474
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 217/504 (43%), Gaps = 31/504 (6%)
Query: 41 LRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALV 100
+ K TS K G P AWP+IG+ +G + H +A +YG +F I++G +V
Sbjct: 1 MAKKTSSK--GKPPGPFAWPLIGNAAAVG--QAAHLSFARLARRYGDVFQIRLGSCPIVV 56
Query: 101 VSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLSN 160
++ + L FA RP + ++ SM F Y +W R+ A ++ N
Sbjct: 57 LNGERAIHQALVQQGSAFADRPSFASFRVVSGGRSM-AFGHYSEHWKVQRRAAH-SMMRN 114
Query: 161 H--RLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKG 218
R + R V + V + +EL L + S + ++ + + NV+ V G
Sbjct: 115 FFTRQPRSRQVLEGHVLSEARELVALLVRG-SADGAFLDPRPLTVVAVANVM--SAVCFG 171
Query: 219 CN-SVDSEEWMELLTR---FLEMSGKFVVSDALPFLRWLD--IGGDERSMKKTAKELDIV 272
C S D E+ ELL+ F G + D +P+L++ + R ++ +
Sbjct: 172 CRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNF 231
Query: 273 VQGWFEEHKRKRDSREVKGEELD--FMSVMPSILGDTEQYSGR-DVDTINKAVCLGLIIA 329
+ F H + +D +S GD+ R D++ + A + A
Sbjct: 232 ILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENV-PATITDIFGA 290
Query: 330 GLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMR 389
DT + L W++ L + D+ +VQ ELD VG R D NL Y+ A L EAMR
Sbjct: 291 SQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMR 350
Query: 390 LYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTK-- 447
VP+ IPH +V GYH+P T + +N W + DP W P F P RFL K
Sbjct: 351 FSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDG 410
Query: 448 --HKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGE 505
+KD+ R ++ F G+R C G + + I+ L DF NEP M
Sbjct: 411 LINKDLTSR-----VMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNF 465
Query: 506 GFGLTMEKSRPLEVLIAPRLSASL 529
+GLT+ K + +V + R S L
Sbjct: 466 SYGLTI-KPKSFKVNVTLRESMEL 488
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 213/477 (44%), Gaps = 40/477 (8%)
Query: 61 VIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFAS 120
V G LH+L P+H L S+ K GP++ +++G+ +V++S +E + FA
Sbjct: 34 VPGFLHLLQPNLPIH--LLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAG 91
Query: 121 RPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLSNHRLEKLRHVRDYEVKTCLKE 180
RP+ + +++ Y W +K+ LL R V + C
Sbjct: 92 RPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFC--- 148
Query: 181 LYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNSVDSEEWMELLTRFLEMSGK 240
++ + V +++ F+ ++I + G +++ + + + ++
Sbjct: 149 -----ERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNKEDTL-VHAFHDCVQDLMKTWDH 202
Query: 241 FVVS--DALPFLRWLDIGGDERSMKKTAKELDIVVQGWFEEHKRKRDSREVKGEELDFMS 298
+ + D +PFLR+ G R +K+ + D +V+ HK V G+ D
Sbjct: 203 WSIQILDMVPFLRFFPNPGLWR-LKQAIENRDHMVEKQLRRHKESM----VAGQWRDMTD 257
Query: 299 VMPSILGD--TEQYSGRDVDTINKAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQ 356
M +G E+ G+ ++ + L I G +TT TL+W ++ LL+H +I ++Q
Sbjct: 258 YMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQ 317
Query: 357 NELDIQVG---TKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHV 413
ELD ++G + +V D L L AT+ E +RL P VPL +PH ++ GY +
Sbjct: 318 EELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDI 377
Query: 414 PARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGV 473
P ++ N+ D VWE+P +F+P+RFL G + L FG G R+C G
Sbjct: 378 PEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEP-------GANPSALAFGCGARVCLGE 430
Query: 474 SFALQVMQFTIASLLQGFDF------ATPSNEPLDMGEGFGLTMEKSRPLEVLIAPR 524
S A + +A LLQ F A PS +P D G L K +P +V + PR
Sbjct: 431 SLARLELFVVLARLLQAFTLLPPPVGALPSLQP-DPYCGVNL---KVQPFQVRLQPR 483
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 199/460 (43%), Gaps = 54/460 (11%)
Query: 75 HRVLGSMADKYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNF 134
H + + YG IF++ +G +V++ +++ KECL +IFA RP + +
Sbjct: 37 HVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP---CLPLFMKMT 93
Query: 135 SMFGF--SPYGSYWCETRKIATLELLSNHRLEKLRHV----RDYEVKTCLKELYELWDKS 188
M G S YG W + R++A + R+ + +E K L+E D
Sbjct: 94 KMGGLLNSRYGRGWVDHRRLA---------VNSFRYFGYGQKSFESK-ILEETKFFNDAI 143
Query: 189 KSTNKMLVEMKRWFADTIRNVILRMIVGK--GCNSVDSEEWMELLTRFLEM--SGKFVVS 244
++ + K+ + + N+ +I G+ D + +EL + +E+ S +
Sbjct: 144 ETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLY 203
Query: 245 DALPFLRWLDIGGDERSMKKTAKELDIVVQGWFEEHKRKRDSREVKGEELDFMSVMP--- 301
+A P++ L G ++ + A D + SR ++ ++ +P
Sbjct: 204 NAFPWIGILPFGKHQQLFRNAAVVYDFL-------------SRLIEKASVNRKPQLPQHF 250
Query: 302 --SILGDTEQYSGRDVDTINKAVCL----GLIIAGLDTTTVTLTWVISLLLNHRDILDKV 355
+ L + +Q T +K + LIIAG +TTT L W I + + +I +V
Sbjct: 251 VDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQV 310
Query: 356 QNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPA 415
Q E+D+ +G + + D + Y +A L E +R VPL I H E+ V GY +P
Sbjct: 311 QKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPK 370
Query: 416 RTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLE---LLPFGSGRRMCPG 472
T ++ N++ + D + W +P F PERFL D G + L+PF GRR C G
Sbjct: 371 GTTVITNLYSVHFDEKYWRDPEVFHPERFL------DSSGYFAKKEALVPFSLGRRHCLG 424
Query: 473 VSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
A M +LLQ F P D+ G+T++
Sbjct: 425 EHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQ 464
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 197/457 (43%), Gaps = 48/457 (10%)
Query: 75 HRVLGSMADKYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNF 134
H + + YG IF++ +G +V++ +++ KECL +IFA RP + +
Sbjct: 37 HVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP---CLPLFMKMT 93
Query: 135 SMFGF--SPYGSYWCETRKIATLELLSNHRLEKLRHV----RDYEVKTCLKELYELWDKS 188
M G S YG W + R++A + R+ + +E K L+E D
Sbjct: 94 KMGGLLNSRYGRGWVDHRRLA---------VNSFRYFGYGQKSFESK-ILEETKFFNDAI 143
Query: 189 KSTNKMLVEMKRWFADTIRNVILRMIVGK--GCNSVDSEEWMELLTRFLEM--SGKFVVS 244
++ + K+ + + N+ +I G+ D + +EL + +E+ S +
Sbjct: 144 ETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLY 203
Query: 245 DALPFLRWLDIGGDERSMKKTAKELDIVVQGWFEEHKRKRDSREVKGEELDFMSVMP--- 301
+A P++ L G ++ + A D + SR ++ ++ +P
Sbjct: 204 NAFPWIGILPFGKHQQLFRNAAVVYDFL-------------SRLIEKASVNRKPQLPQHF 250
Query: 302 --SILGDTEQYSGRDVDTINKAVCL----GLIIAGLDTTTVTLTWVISLLLNHRDILDKV 355
+ L + +Q T +K + LIIAG +TTT L W I + + +I +V
Sbjct: 251 VDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQV 310
Query: 356 QNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPA 415
Q E+D+ +G + + D + Y +A L E +R VPL I H E+ V GY +P
Sbjct: 311 QKEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPK 370
Query: 416 RTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSF 475
T ++ N++ + D + W +P F PERFL + L+PF GRR C G
Sbjct: 371 GTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYF---AKKEALVPFSLGRRHCLGEHL 427
Query: 476 ALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
A M +LLQ F P D+ G+T++
Sbjct: 428 ARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQ 464
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 194/460 (42%), Gaps = 45/460 (9%)
Query: 84 KYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFG--FSP 141
++G +F++++ +V++ +E L T+ + A RP +ILG+ G +
Sbjct: 42 RFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLAR 101
Query: 142 YGSYWCETRKIATLEL----LSNHRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVE 197
YG W E R+ + L L LE+ E CL + L++
Sbjct: 102 YGPAWREQRRFSVSTLRNLGLGKKSLEQWV----TEEAACLCAAFANHSGRPFRPNGLLD 157
Query: 198 MKRWFADTIRNVILRMIVGKGCNSVDSE--EWMELLTRFLEMSGKFV--VSDALPFLRWL 253
+ NVI + G+ D ++L L+ F+ V +A+P L +
Sbjct: 158 ------KAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI 211
Query: 254 DI--GGDERSMKKTAKELDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYS 311
G R K +LD ++ EH+ D + + + + L + E+
Sbjct: 212 PALAGKVLRFQKAFLTQLDELLT----EHRMTWDPAQPPRD------LTEAFLAEMEKAK 261
Query: 312 GRDVDTIN----KAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKR 367
G + N + V L AG+ TT+ TL W + L++ H D+ +VQ E+D +G R
Sbjct: 262 GNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVR 321
Query: 368 QVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQ 427
+ D ++ Y A + E R VPL + H + V G+ +P T L+ N+ +
Sbjct: 322 RPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVL 381
Query: 428 RDPRVWEEPCKFQPERFLTKHKDIDVRGQHLE---LLPFGSGRRMCPGVSFALQVMQFTI 484
+D VWE+P +F PE FL D +G ++ LPF +GRR C G A +
Sbjct: 382 KDEAVWEKPFRFHPEHFL------DAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFF 435
Query: 485 ASLLQGFDFATPSNEPLDMGEGFGLTMEKSRPLEVLIAPR 524
SLLQ F F+ P+ +P G + P E+ PR
Sbjct: 436 TSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYELCAVPR 475
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 194/460 (42%), Gaps = 45/460 (9%)
Query: 84 KYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFG--FSP 141
++G +F++++ +V++ +E L T+ + A RP +ILG+ G +
Sbjct: 42 RFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLAR 101
Query: 142 YGSYWCETRKIATLEL----LSNHRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVE 197
YG W E R+ + L L LE+ E CL + L++
Sbjct: 102 YGPAWREQRRFSVSTLRNLGLGKKSLEQWV----TEEAACLCAAFANHSGRPFRPNGLLD 157
Query: 198 MKRWFADTIRNVILRMIVGKGCNSVDSE--EWMELLTRFLEMSGKFV--VSDALPFLRWL 253
+ NVI + G+ D ++L L+ F+ V +A+P R +
Sbjct: 158 ------KAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVDRHI 211
Query: 254 DI--GGDERSMKKTAKELDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYS 311
G R K +LD ++ EH+ D + + + + L + E+
Sbjct: 212 PALAGKVLRFQKAFLTQLDELLT----EHRMTWDPAQPPRD------LTEAFLAEMEKAK 261
Query: 312 GRDVDTIN----KAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKR 367
G + N + V L AG+ TT+ TL W + L++ H D+ +VQ E+D +G R
Sbjct: 262 GNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVR 321
Query: 368 QVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQ 427
+ D ++ Y A + E R VPL + H + V G+ +P T L+ N+ +
Sbjct: 322 RPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVL 381
Query: 428 RDPRVWEEPCKFQPERFLTKHKDIDVRGQHLE---LLPFGSGRRMCPGVSFALQVMQFTI 484
+D VWE+P +F PE FL D +G ++ LPF +GRR C G A +
Sbjct: 382 KDEAVWEKPFRFHPEHFL------DAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFF 435
Query: 485 ASLLQGFDFATPSNEPLDMGEGFGLTMEKSRPLEVLIAPR 524
SLLQ F F+ P+ +P G + P E+ PR
Sbjct: 436 TSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYELCAVPR 475
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 199/473 (42%), Gaps = 33/473 (6%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P P IG+ L E ++ L ++++YGP+FTI +G R +
Sbjct: 1 MAKKTSSKGK--LPPGPTPLPFIGNYLQLNT-EQMYNSLMKISERYGPVFTIHLGPRRVV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ + KE L + F+ R + + L F YG + + L S
Sbjct: 58 VLCGHDAVKEALVDQAEEFSGRGEQATFDWL--------FKGYGVAFSNGERAKQLRRFS 109
Query: 160 NHRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGC 219
L + + +E L D + T+ ++ + + T+ NVI ++ G
Sbjct: 110 IATLRGFGVGKRGIEERIQEEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRF 169
Query: 220 NSVDSEEWMELLTRFLEMSGKFVVSDALPFLRWLD-----IGGDERSMKKTAKELDIVVQ 274
+ D +E++ LL R + S +F + + G ++ K + L+ +
Sbjct: 170 DYED-KEFLSLL-RMMLGSFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIA 227
Query: 275 GWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVC-LGLIIAGLDT 333
E ++R D + DF+ + + E+ + N + L L AG +T
Sbjct: 228 KKVEHNQRTLDPNSPR----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTET 283
Query: 334 TTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPA 393
+ TL + LL+ H ++ KV E+D +G RQ D + Y +A + E R
Sbjct: 284 VSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDM 343
Query: 394 VPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDV 453
+P+ + H ++ + +P T++ + + RDPR + P F P+ FL D
Sbjct: 344 LPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFL------DK 397
Query: 454 RGQHLE---LLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDM 503
+GQ + +PF G+R C G A + +++Q F F +P + P D+
Sbjct: 398 KGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQS-PKDI 449
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 125/248 (50%), Gaps = 17/248 (6%)
Query: 281 KRKRDSR--EVKGEELDFMSVMPSILGDTEQYSGR---DVDTINKAVCLGLIIAGLDTTT 335
KR ++SR + + +DF+ +M E S + D++ + +++ I AG +TT+
Sbjct: 234 KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIF--IFAGYETTS 291
Query: 336 VTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVP 395
L++++ L H D+ K+Q E+D + K + + YL + E +RL+P +
Sbjct: 292 SVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP-IA 350
Query: 396 LLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKD-IDVR 454
+ + ++ +NG +P ++I + L RDP+ W EP KF PERF K+KD ID
Sbjct: 351 MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNID-- 408
Query: 455 GQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNE---PLDMGEGFGLTM 511
PFGSG R C G+ FAL M+ + +LQ F F P E PL + G L
Sbjct: 409 --PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK-PCKETQIPLKLSLGGLLQP 465
Query: 512 EKSRPLEV 519
EK L+V
Sbjct: 466 EKPVVLKV 473
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 198/474 (41%), Gaps = 48/474 (10%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P PV+G+L + + L R + +KYG +FT+ +G +
Sbjct: 1 MAKKTSSKGK--LPPGPSPLPVLGNLLQMDR-KGLLRSFLRLREKYGDVFTVYLGSRPVV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ + +E L + F+ R K ++ + F YG + + L S
Sbjct: 58 VLCGTDAIREALVDQAEAFSGRGKIAVVDPI--------FQGYGVIFANGERWRALRRFS 109
Query: 160 NHRLEKLRHVRDYEV-KTCLKELYE-----LWDKSKSTNKMLVEMKRWFADTIRNVILRM 213
L +RD+ + K ++E + L ++ + + L++ F N+I +
Sbjct: 110 ------LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI 163
Query: 214 IVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALP----------FLRWLDIGGDERSMK 263
+ GK + D + R L++ + + FL++ G R +
Sbjct: 164 VFGKRFDYKDP-----VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFP--GTHRQIY 216
Query: 264 KTAKELDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAV- 322
+ +E++ + E+H+ D + DF+ V + + + N +
Sbjct: 217 RNLQEINTFIGQSVEKHRATLDPSNPR----DFIDVYLLRMEKDKSDPSSEFHHQNLILT 272
Query: 323 CLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQA 382
L L AG +TT+ TL + L+L + + ++VQ E++ +G+ R D + Y A
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDA 332
Query: 383 TLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPE 442
+ E RL +P +PH ++ GY +P T++ + DPR +E P F P
Sbjct: 333 VIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPG 392
Query: 443 RFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATP 496
FL + + ++ +PF G+R+C G A + ++LQ F A+P
Sbjct: 393 HFLDANGALK---RNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 125/248 (50%), Gaps = 17/248 (6%)
Query: 281 KRKRDSR--EVKGEELDFMSVMPSILGDTEQYSGR---DVDTINKAVCLGLIIAGLDTTT 335
KR ++SR + + +DF+ +M E S + D++ + +++ I AG +TT+
Sbjct: 233 KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIF--IFAGYETTS 290
Query: 336 VTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVP 395
L++++ L H D+ K+Q E+D + K + + YL + E +RL+P +
Sbjct: 291 SVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP-IA 349
Query: 396 LLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKD-IDVR 454
+ + ++ +NG +P ++I + L RDP+ W EP KF PERF K+KD ID
Sbjct: 350 MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNID-- 407
Query: 455 GQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNE---PLDMGEGFGLTM 511
PFGSG R C G+ FAL M+ + +LQ F F P E PL + G L
Sbjct: 408 --PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK-PCKETQIPLKLSLGGLLQP 464
Query: 512 EKSRPLEV 519
EK L+V
Sbjct: 465 EKPVVLKV 472
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 125/248 (50%), Gaps = 17/248 (6%)
Query: 281 KRKRDSR--EVKGEELDFMSVMPSILGDTEQYSGR---DVDTINKAVCLGLIIAGLDTTT 335
KR ++SR + + +DF+ +M E S + D++ + +++ I AG +TT+
Sbjct: 232 KRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIF--IFAGYETTS 289
Query: 336 VTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVP 395
L++++ L H D+ K+Q E+D + K + + YL + E +RL+P +
Sbjct: 290 SVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFP-IA 348
Query: 396 LLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKD-IDVR 454
+ + ++ +NG +P ++I + L RDP+ W EP KF PERF K+KD ID
Sbjct: 349 MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNID-- 406
Query: 455 GQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNE---PLDMGEGFGLTM 511
PFGSG R C G+ FAL M+ + +LQ F F P E PL + G L
Sbjct: 407 --PYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK-PCKETQIPLKLSLGGLLQP 463
Query: 512 EKSRPLEV 519
EK L+V
Sbjct: 464 EKPVVLKV 471
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 198/474 (41%), Gaps = 48/474 (10%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P PV+G+L + + L R + +KYG +FT+ +G +
Sbjct: 1 MAKKTSSKGK--LPPGPSPLPVLGNLLQMDR-KGLLRSFLRLREKYGDVFTVYLGSRPVV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ + +E L + F+ R K ++ + F YG + + L S
Sbjct: 58 VLCGTDAIREALVDQAEAFSGRGKIAVVDPI--------FQGYGVIFANGERWRALRRFS 109
Query: 160 NHRLEKLRHVRDYEV-KTCLKELYE-----LWDKSKSTNKMLVEMKRWFADTIRNVILRM 213
L +RD+ + K ++E + L ++ + + L++ F N+I +
Sbjct: 110 ------LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI 163
Query: 214 IVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALP----------FLRWLDIGGDERSMK 263
+ GK + D + R L++ + + FL++ G R +
Sbjct: 164 VFGKRFDYKDP-----VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFP--GTHRQIY 216
Query: 264 KTAKELDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAV- 322
+ +E++ + E+H+ D + DF+ V + + + N +
Sbjct: 217 RNLQEINTFIGQSVEKHRATLDPSNPR----DFIDVYLLRMEKDKSDPSSEFHHQNLILT 272
Query: 323 CLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQA 382
L L AG +TT+ TL + L+L + + ++VQ E++ +G+ R D + Y A
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDA 332
Query: 383 TLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPE 442
+ E RL +P +PH ++ GY +P T++ + DPR +E P F P
Sbjct: 333 VIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPG 392
Query: 443 RFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATP 496
FL + + ++ +PF G+R+C G A + ++LQ F A+P
Sbjct: 393 HFLDANGALK---RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 198/474 (41%), Gaps = 48/474 (10%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P PV+G+L + + L R + +KYG +FT+ +G +
Sbjct: 1 MAKKTSSKGK--LPPGPSPLPVLGNLLQMDR-KGLLRSFLRLREKYGDVFTVYLGSRPVV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ + +E L + F+ R K ++ + F YG + + L S
Sbjct: 58 VLCGTDAIREALVDQAEAFSGRGKIAVVDPI--------FQGYGVIFANGERWRALRRFS 109
Query: 160 NHRLEKLRHVRDYEV-KTCLKELYE-----LWDKSKSTNKMLVEMKRWFADTIRNVILRM 213
L +RD+ + K ++E + L ++ + + L++ F N+I +
Sbjct: 110 ------LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI 163
Query: 214 IVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALP----------FLRWLDIGGDERSMK 263
+ GK + D + R L++ + + FL++ G R +
Sbjct: 164 VFGKRFDYKDP-----VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFP--GTHRQIY 216
Query: 264 KTAKELDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAV- 322
+ +E++ + E+H+ D + DF+ V + + + N +
Sbjct: 217 RNLQEINTFIGQSVEKHRATLDPSNPR----DFIDVYLLRMEKDKSDPSSEFHHQNLILT 272
Query: 323 CLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQA 382
L L AG +TT+ TL + L+L + + ++VQ E++ +G+ R D + Y A
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDA 332
Query: 383 TLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPE 442
+ E RL +P +PH ++ GY +P T++ + DPR +E P F P
Sbjct: 333 VIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPG 392
Query: 443 RFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATP 496
FL + + ++ +PF G+R+C G A + ++LQ F A+P
Sbjct: 393 HFLDANGALK---RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 198/474 (41%), Gaps = 48/474 (10%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P PV+G+L + + L R + +KYG +FT+ +G +
Sbjct: 1 MAKKTSSKGK--LPPGPSPLPVLGNLLQMDR-KGLLRSFLRLREKYGDVFTVYLGSRPVV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ + +E L + F+ R K ++ + F YG + + L S
Sbjct: 58 VLCGTDAIREALVDQAEAFSGRGKIAVVDPI--------FQGYGVIFANGERWRALRRFS 109
Query: 160 NHRLEKLRHVRDYEV-KTCLKELYE-----LWDKSKSTNKMLVEMKRWFADTIRNVILRM 213
L +RD+ + K ++E + L ++ + + L++ F N+I +
Sbjct: 110 ------LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI 163
Query: 214 IVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALP----------FLRWLDIGGDERSMK 263
+ GK + D + R L++ + + FL++ G R +
Sbjct: 164 VFGKRFDYKDP-----VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKYFP--GTHRQIY 216
Query: 264 KTAKELDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAV- 322
+ +E++ + E+H+ D + DF+ V + + + N +
Sbjct: 217 RNLQEINTFIGQSVEKHRATLDPSNPR----DFIDVYLLRMEKDKSDPSSEFHHQNLILT 272
Query: 323 CLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQA 382
L L AG +TT+ TL + L+L + + ++VQ E++ +G+ R D + Y A
Sbjct: 273 VLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDA 332
Query: 383 TLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPE 442
+ E RL +P +PH ++ GY +P T++ + DPR +E P F P
Sbjct: 333 VIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPG 392
Query: 443 RFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATP 496
FL + + ++ +PF G+R+C G A + ++LQ F A+P
Sbjct: 393 HFLDANGALK---RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 197/472 (41%), Gaps = 44/472 (9%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P PV+G+L + + L R + +KYG +FT+ +G +
Sbjct: 1 MAKKTSSKGK--LPPGPSPLPVLGNLLQMDR-KGLLRSFLRLREKYGDVFTVYLGSRPVV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ + +E L + F+ R K ++ + F YG + + L S
Sbjct: 58 VLCGTDAIREALVDQAEAFSGRGKIAVVDPI--------FQGYGVIFANGERWRALRRFS 109
Query: 160 NHRLEKLRHVRDYEV-KTCLKELYE-----LWDKSKSTNKMLVEMKRWFADTIRNVILRM 213
L +RD+ + K ++E + L ++ + + L++ F N+I +
Sbjct: 110 ------LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI 163
Query: 214 IVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALPFLRWLDI--------GGDERSMKKT 265
+ GK + D + R L++ + + + ++ G R + +
Sbjct: 164 VFGKRFDYKDP-----VFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRN 218
Query: 266 AKELDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAV-CL 324
+E++ + E+H+ D + DF+ V + + + N + L
Sbjct: 219 LQEINTFIGQSVEKHRATLDPSNPR----DFIDVYLLRMEKDKSDPSSEFHHQNLILTVL 274
Query: 325 GLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATL 384
L AG +TT+ TL + L+L + + ++VQ E++ +G+ R D + Y A +
Sbjct: 275 SLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVI 334
Query: 385 KEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERF 444
E RL +P +PH ++ GY +P T++ + DPR +E P F P F
Sbjct: 335 HEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF 394
Query: 445 LTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATP 496
L + + ++ +PF G+R+C G A + ++LQ F A+P
Sbjct: 395 LDANGALK---RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 187/431 (43%), Gaps = 30/431 (6%)
Query: 83 DKYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPY 142
+KYG +FT+ +G +++ E +E L + F+ R K ++ + + +
Sbjct: 41 EKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFAN-- 98
Query: 143 GSYWCETRKIATLELLSNHRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWF 202
G+ W R+ + + ++ R E CL E EL KSK L++ F
Sbjct: 99 GNRWKVLRRFSVTTMRDFGMGKRSVEERIQEEAQCLIE--ELR-KSKGA---LMDPTFLF 152
Query: 203 ADTIRNVILRMIVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALPFLRWLDIG------ 256
N+I ++ GK + D +E++++L F + ++S L L G
Sbjct: 153 QSITANIICSIVFGKRFHYQD-QEFLKMLNLFYQTFS--LISSVFGQLFELFSGFLKHFP 209
Query: 257 GDERSMKKTAKELDIVVQGWFEEHKRKRDS---REVKGEELDFMSVMPSILGDTEQYSGR 313
G R + K +E++ + E+H+ D R++ L M S +
Sbjct: 210 GAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNL 269
Query: 314 DVDTINKAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESD 373
+++T L L AG +TT+ TL + L+L + + ++V E++ +G R D
Sbjct: 270 NLNT------LSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHD 323
Query: 374 LKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVW 433
+ Y +A + E R +P+ +PH + + GY +P T++ + + DP +
Sbjct: 324 RAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYF 383
Query: 434 EEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDF 493
E+P F P+ FL + + + +PF G+R+C G A + ++LQ F
Sbjct: 384 EKPDAFNPDHFLDANGALK---KTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSM 440
Query: 494 ATP-SNEPLDM 503
A+P + E +D+
Sbjct: 441 ASPVAPEDIDL 451
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 209/475 (44%), Gaps = 38/475 (8%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P P+IG+L L + + + +A ++GP+FT+ +G R +
Sbjct: 1 MAKKTSSKGK--LPPGPFPLPIIGNLFQLEL-KNIPKSFTRLAQRFGPVFTLYVGSQRMV 57
Query: 100 VVSSWEMAKECLTTNDKIFASR---PKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLE 156
V+ ++ KE L F+ R P A G F+ G W + R+ + L
Sbjct: 58 VMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNN------GPTWKDIRRFS-LT 110
Query: 157 LLSNHRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVG 216
L N+ + K + + +E + L + + T + NVI ++
Sbjct: 111 TLRNYGMGKQGNESRIQ-----REAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFR 165
Query: 217 KGCNSVDSEEWMELLTRFLE----MSGKFV-VSDALP-FLRWLDIGGDERSMKKTAKELD 270
K + D E+++ L+ F E +S ++ + + P FL +L G R + K E+
Sbjct: 166 KHFDYND-EKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEVK 222
Query: 271 IVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN--KAVCLGLII 328
V +EH + D + + M + E++S + T++ L
Sbjct: 223 EYVSERVKEHHQSLDPNCPRDLTDCLLVEM-----EKEKHSAERLYTMDGITVTVADLFF 277
Query: 329 AGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAM 388
AG +TT+ TL + + +L+ + +I +K+ E+D +G R D + + Y+ A + E
Sbjct: 278 AGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQ 337
Query: 389 RLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKH 448
R VP +PHEA + GY +P T ++ + + D + + +P KF+PE FL ++
Sbjct: 338 RFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNEN 397
Query: 449 KDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDM 503
PF +G+R+C G A + + ++LQ F+ P +P D+
Sbjct: 398 GKFKYSDY---FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLK-PLVDPKDI 448
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 201/479 (41%), Gaps = 45/479 (9%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P P IG+ L E ++ L ++++YGP+FTI +G R +
Sbjct: 1 MAKKTSSKGK--LPPGPTPLPFIGNYLQLNT-EQMYNSLMKISERYGPVFTIHLGPRRVV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ + +E L + F+ R + + + F YG + + L S
Sbjct: 58 VLCGHDAVREALVDQAEEFSGRGEQATFDWV--------FKGYGVVFSNGERAKQLRRFS 109
Query: 160 NHRLEKLRHVRDYEV-KTCLKELYE-----LWDKSKSTNKMLVEMKRWFADTIRNVILRM 213
+ +RD+ V K ++E + L D + T ++ + + T+ NVI +
Sbjct: 110 ------IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI 163
Query: 214 IVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALPFLRWLD-----IGGDERSMKKTAKE 268
+ G + D +E++ LL R + S +F + + G ++ + +
Sbjct: 164 VFGDRFDYKD-KEFLSLL-RMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQG 221
Query: 269 LDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVC-LGLI 327
L+ + E ++R D + DF+ + + E+ + N + L L
Sbjct: 222 LEDFIAKKVEHNQRTLDPNSPR----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLF 277
Query: 328 IAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEA 387
AG +T + TL + LL+ H ++ KV E+D +G RQ D + Y++A + E
Sbjct: 278 FAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEI 337
Query: 388 MRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTK 447
R +P+ + ++ + +P T++ + + RDP + P F P+ FL +
Sbjct: 338 QRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 448 HKDIDVRGQHLE---LLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDM 503
+GQ + +PF G+R C G A + +++Q F + S P D+
Sbjct: 398 ------KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS-SQSPKDI 449
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 200/479 (41%), Gaps = 45/479 (9%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P P IG+ L E ++ L ++++YGP+FTI +G R +
Sbjct: 1 MAKKTSSKGK--LPPGPTPLPFIGNYLQLNT-EQMYNSLMKISERYGPVFTIHLGPRRVV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ + +E L + F+ R + + + F YG + + L S
Sbjct: 58 VLCGHDAVREALVDQAEEFSGRGEQATFDWV--------FKGYGVVFSNGERAKQLRRFS 109
Query: 160 NHRLEKLRHVRDYEV-KTCLKELYE-----LWDKSKSTNKMLVEMKRWFADTIRNVILRM 213
+ +RD+ V K ++E + L D + T ++ + + T+ NVI +
Sbjct: 110 ------IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI 163
Query: 214 IVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALPFLRWLD-----IGGDERSMKKTAKE 268
+ G + D +E++ LL L + +F + + G ++ + +
Sbjct: 164 VFGDRFDYKD-KEFLSLLRMMLGIF-QFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQG 221
Query: 269 LDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAV-CLGLI 327
L+ + E ++R D + DF+ + + E+ + N + L L
Sbjct: 222 LEDFIAKKVEHNQRTLDPNSPR----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLF 277
Query: 328 IAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEA 387
I G +T + TL + LL+ H ++ KV E+D +G RQ D + Y++A + E
Sbjct: 278 IGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEI 337
Query: 388 MRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTK 447
R +P+ + ++ + +P T++ + + RDP + P F P+ FL +
Sbjct: 338 QRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 448 HKDIDVRGQHLE---LLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDM 503
+GQ + +PF G+R C G A + +++Q F + S P D+
Sbjct: 398 ------KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS-SQSPKDI 449
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 195/458 (42%), Gaps = 29/458 (6%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P +P+IG++ + + + + L ++ YGP+FT+ +G+ +
Sbjct: 1 MAKKTSSKGK--LPPGPTPFPIIGNILQIDAKD-ISKSLTKFSECYGPVFTVYLGMKPTV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ +E KE L + FA R +E + + FS W E R+ + + L +
Sbjct: 58 VLHGYEAVKEALVDLGEEFAGRGSVPILEKVSKGLGI-AFS-NAKTWKEMRRFSLMTLRN 115
Query: 160 NHRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGC 219
++ R E CL E EL + TN + NVI +I
Sbjct: 116 FGMGKRSIEDRIQEEARCLVE--EL----RKTNASPCDPTFILGCAPCNVICSVIFHNRF 169
Query: 220 NSVDSE--EWMELLTRFLEMSGK--FVVSDALPFLRWLD-IGGDERSMKKTAKELDIVVQ 274
+ D E + ME L +E+ G V + P L LD G +++ K A + +
Sbjct: 170 DYKDEEFLKLMESLHENVELLGTPWLQVYNNFPAL--LDYFPGIHKTLLKNADYIKNFIM 227
Query: 275 GWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVCLG-LIIAGLDT 333
+EH++ D + DF+ L EQ + + + + + L AG +T
Sbjct: 228 EKVKEHQKLLDVNNPR----DFIDCF---LIKMEQENNLEFTLESLVIAVSDLFGAGTET 280
Query: 334 TTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPA 393
T+ TL + + LLL H ++ +VQ E++ +G R D + Y A + E R
Sbjct: 281 TSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDL 340
Query: 394 VPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDV 453
+P +PH + Y +P T ++ ++ + D + + P F P FL + +
Sbjct: 341 LPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKK 400
Query: 454 RGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGF 491
+PF +G+RMC G A + + S+LQ F
Sbjct: 401 SDY---FMPFSAGKRMCVGEGLARMELFLFLTSILQNF 435
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 193/465 (41%), Gaps = 32/465 (6%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P P+IG++ + + + + + + YGP+FT+ G+N +
Sbjct: 1 MAKKTSSKGK--LPPGPTPLPIIGNMLQIDVKD-ICKSFTNFSKVYGPVFTVYFGMNPIV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V +E KE L N + F+ R + + + + S G W E R+ + L L
Sbjct: 58 VFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGII--SSNGKRWKEIRRFS-LTTLR 114
Query: 160 NHRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGC 219
N + K R + D +E + L ++ + T + NVI ++ K
Sbjct: 115 NFGMGK-RSIED----RVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRF 169
Query: 220 NSVDSEEWMELLTRFLEM-----SGKFVVSDALPFLRWLDIGGDERSMKKTAKELDIVVQ 274
+ D + ++ L+ RF E S V + P L G + +K A + +
Sbjct: 170 DYKD-QNFLTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVA-----LTR 223
Query: 275 GWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVCLG----LIIAG 330
+ E ++ + DF+ L EQ N +G L +AG
Sbjct: 224 SYIREKVKEHQASLDVNNPRDFIDCF---LIKMEQEKDNQKSEFNIENLVGTVADLFVAG 280
Query: 331 LDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRL 390
+TT+ TL + + LLL H ++ KVQ E+D +G R D ++ Y A + E R
Sbjct: 281 TETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRY 340
Query: 391 YPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKD 450
VP +PH + Y +P T ++ + + D + + P F P FL K+ +
Sbjct: 341 SDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGN 400
Query: 451 IDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFAT 495
+ +PF +G+R+C G A + + ++LQ F+ +
Sbjct: 401 FK---KSDYFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKS 442
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 200/479 (41%), Gaps = 45/479 (9%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P P IG+ L E ++ L ++++YGP+FTI +G R +
Sbjct: 1 MAKKTSSKGK--LPPGPTPLPFIGNYLQLNT-EQMYNSLMKISERYGPVFTIHLGPRRVV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ + +E L + F+ R + + + F YG + + L S
Sbjct: 58 VLCGHDAVREALVDQAEEFSGRGEQATFDWV--------FKGYGVVFSNGERAKQLRRFS 109
Query: 160 NHRLEKLRHVRDYEV-KTCLKELYE-----LWDKSKSTNKMLVEMKRWFADTIRNVILRM 213
+ +RD+ V K ++E + L D + T ++ + + T+ NVI +
Sbjct: 110 ------IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI 163
Query: 214 IVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALPFLRWLD-----IGGDERSMKKTAKE 268
+ G + D +E++ LL L + +F + + G ++ + +
Sbjct: 164 VFGDRFDYKD-KEFLSLLRMMLGIF-QFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQG 221
Query: 269 LDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAV-CLGLI 327
L+ + E ++R D + DF+ + + E+ + N + L L
Sbjct: 222 LEDFIAKKVEHNQRTLDPNSPR----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLF 277
Query: 328 IAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEA 387
I G +T + TL + LL+ H ++ KV E+D +G RQ D + Y++A + E
Sbjct: 278 IGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEI 337
Query: 388 MRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTK 447
R +P+ + ++ + +P T++ + + RDP + P F P+ FL +
Sbjct: 338 QRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 448 HKDIDVRGQHLE---LLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDM 503
+GQ + +PF G+R C G A + +++Q F + S P D+
Sbjct: 398 ------KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS-SQSPKDI 449
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 200/479 (41%), Gaps = 45/479 (9%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P P IG+ L E ++ L ++++YGP+FTI +G R +
Sbjct: 1 MAKKTSSKGK--LPPGPTPLPFIGNYLQLNT-EQMYNSLMKISERYGPVFTIHLGPRRVV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ + +E L + F+ R + + + F YG + + L S
Sbjct: 58 VLCGHDAVREALVDQAEEFSGRGEQATFDWV--------FKGYGVVFSNGERAKQLRRFS 109
Query: 160 NHRLEKLRHVRDYEV-KTCLKELYE-----LWDKSKSTNKMLVEMKRWFADTIRNVILRM 213
+ +RD+ V K ++E + L D + T ++ + + T+ NVI +
Sbjct: 110 ------IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI 163
Query: 214 IVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALPFLRWLD-----IGGDERSMKKTAKE 268
+ G + D +E++ LL L + +F + + G ++ + +
Sbjct: 164 VFGDRFDYKD-KEFLSLLRMMLGIF-QFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQG 221
Query: 269 LDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAV-CLGLI 327
L+ + E ++R D + DF+ + + E+ + N + L L
Sbjct: 222 LEDFIAKKVEHNQRTLDPNSPR----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLF 277
Query: 328 IAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEA 387
I G +T + TL + LL+ H ++ KV E+D +G RQ D + Y++A + E
Sbjct: 278 IGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEI 337
Query: 388 MRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTK 447
R +P+ + ++ + +P T++ + + RDP + P F P+ FL +
Sbjct: 338 QRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 448 HKDIDVRGQHLE---LLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDM 503
+GQ + +PF G+R C G A + +++Q F + S P D+
Sbjct: 398 ------KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS-SQSPKDI 449
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/479 (21%), Positives = 200/479 (41%), Gaps = 45/479 (9%)
Query: 40 LLRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRAL 99
+ +K +SK K P P IG+ L E ++ L ++++YGP+FTI +G R +
Sbjct: 1 MAKKTSSKGK--LPPGPTPLPFIGNYLQLNT-EQMYNSLMKISERYGPVFTIHLGPRRVV 57
Query: 100 VVSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLS 159
V+ + +E L + F+ R + + + F YG + + L S
Sbjct: 58 VLCGHDAVREALVDQAEEFSGRGEQATFDWV--------FKGYGVVFSNGERAKQLRRFS 109
Query: 160 NHRLEKLRHVRDYEV-KTCLKELYE-----LWDKSKSTNKMLVEMKRWFADTIRNVILRM 213
+ +RD+ V K ++E + L D + T ++ + + T+ NVI +
Sbjct: 110 ------IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI 163
Query: 214 IVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALPFLRWLD-----IGGDERSMKKTAKE 268
+ G + D +E++ LL L + +F + + G ++ + +
Sbjct: 164 VFGDRFDYKD-KEFLSLLRMMLGIF-QFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQG 221
Query: 269 LDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAV-CLGLI 327
L+ + E ++R D + DF+ + + E+ + N + L L
Sbjct: 222 LEDFIAKKVEHNQRTLDPNSPR----DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLF 277
Query: 328 IAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEA 387
+ G +T + TL + LL+ H ++ KV E+D +G RQ D + Y++A + E
Sbjct: 278 VGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEI 337
Query: 388 MRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTK 447
R +P+ + ++ + +P T++ + + RDP + P F P+ FL +
Sbjct: 338 QRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNE 397
Query: 448 HKDIDVRGQHLE---LLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDM 503
+GQ + +PF G+R C G A + +++Q F + S P D+
Sbjct: 398 ------KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKS-SQSPKDI 449
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 204/489 (41%), Gaps = 61/489 (12%)
Query: 59 WPVIGHLHIL---GGPEPLHRVLGSMADKYGPIFTIKIGINRALVVSSWEMAKECLTTND 115
WP++G L + GG + H L KYG IF +K+G ++ + S + + T
Sbjct: 32 WPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE- 90
Query: 116 KIFASRPKTLAME----ILGYNFSMFGFSPY-GSYWCETRKIATLELLSNHRLEKLRHVR 170
++ P+ L ++ + +G G W R +L+ + KL
Sbjct: 91 ---SAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKI 147
Query: 171 DYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNSVDSEEWMEL 230
+ + L+ + EL D+ + E+ +W ++I V+ G + EE +
Sbjct: 148 NEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETE-EEALTF 206
Query: 231 LTRFLEMSGKFVVSDALPFLRWLDIGGDERSMKKTAKELDIVVQGWFEEHKRKRDSREVK 290
+T M F P + K L+ V ++ H D+
Sbjct: 207 ITAIKTMMSTFGKMMVTPV--------------ELHKRLNTKV---WQAHTLAWDT---- 245
Query: 291 GEELDFMSVMPSILGDTEQYS---GRDV-------DTINK----AVCLGLIIAGLDTTTV 336
F SV P I ++YS G D D ++K A L +A ++TT
Sbjct: 246 ----IFKSVKPCIDNRLQRYSQQPGADFLCDIYQQDHLSKKELYAAVTELQLAAVETTAN 301
Query: 337 TLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPL 396
+L W++ L + ++ E+ + + DL+N+ YL+A LKE+MRL P+VP
Sbjct: 302 SLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPF 361
Query: 397 LIPHEAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRG 455
+++ TV G Y +P T L +N L +E+ KF+PER+L K K I+
Sbjct: 362 TT--RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINPFA 419
Query: 456 QHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTMEKSR 515
LPFG G+RMC G A + + ++Q +D NEP++M G+ + SR
Sbjct: 420 H----LPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLH-LGILV-PSR 473
Query: 516 PLEVLIAPR 524
L + PR
Sbjct: 474 ELPIAFRPR 482
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 202/461 (43%), Gaps = 26/461 (5%)
Query: 41 LRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALV 100
+ K TS K G P PVIG++ +G + + + L +++ YGP+FT+ G+ +V
Sbjct: 1 MAKKTSSK--GRPPGPTPLPVIGNILQIGIKD-ISKSLTNLSKVYGPVFTLYFGLKPIVV 57
Query: 101 VSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLSN 160
+ +E KE L + F+ R E F + FS G W E R+ + L L N
Sbjct: 58 LHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIV-FS-NGKKWKEIRRFS-LMTLRN 114
Query: 161 HRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCN 220
+ K R + D V+ + L E K+K++ + NVI +I K +
Sbjct: 115 FGMGK-RSIED-RVQEEARCLVEELRKTKASP---CDPTFILGCAPCNVICSIIFHKRFD 169
Query: 221 SVDSE--EWMELLTRFLEM--SGKFVVSDALPFLRWLDIGGDERSMKKTAKELDIVVQGW 276
D + ME L +E+ S V + P L G + +K A +++
Sbjct: 170 YKDQQFLNLMEKLNENIEILSSPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEK- 228
Query: 277 FEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN--KAVCLGLIIAGLDTT 334
+EH+ D + DF+ + + E+++ TI + + L AG +TT
Sbjct: 229 VKEHQESMDMNNPQ----DFIDCFLMKM-EKEKHNQPSEFTIESLENTAVDLFGAGTETT 283
Query: 335 TVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAV 394
+ TL + + LLL H ++ KVQ E++ +G R D ++ Y A + E R +
Sbjct: 284 STTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLL 343
Query: 395 PLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVR 454
P +PH + Y +P T +LI++ + D + + P F P FL + +
Sbjct: 344 PTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFK-- 401
Query: 455 GQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFAT 495
+ +PF +G+R+C G + A + + S+LQ F+ +
Sbjct: 402 -KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKS 441
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 201/465 (43%), Gaps = 32/465 (6%)
Query: 41 LRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALV 100
+ K TS + P PVIG++ + + + + L +++ YGP+FT+ G+ R +V
Sbjct: 1 MAKKTSSGRGKLPPGPTPLPVIGNILQIDIKD-VSKSLTNLSKIYGPVFTLYFGLERMVV 59
Query: 101 VSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLSN 160
+ +E+ KE L + F+ R E F + FS G W E R+ + L L N
Sbjct: 60 LHGYEVVKEALIDLGEEFSGRGHFPLAERANRGFGIV-FS-NGKRWKEIRRFS-LMTLRN 116
Query: 161 HRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCN 220
+ K R + D V+ + L E K+K++ + NVI +I K +
Sbjct: 117 FGMGK-RSIED-RVQEEARCLVEELRKTKASP---CDPTFILGCAPCNVICSIIFQKRFD 171
Query: 221 SVDSEEWMELLTRFLEMSGKFVVSDALPFLRWLDIGGDERSM--------KKTAKELDIV 272
D ++++ L+ + E +VS W+ I + ++ K K L +
Sbjct: 172 YKD-QQFLNLMEKLNE--NIRIVSTP-----WIQICNNFPTIIDYFPGTHNKLLKNLAFM 223
Query: 273 VQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVCLG--LIIAG 330
E+ K ++S ++ DF+ I + E+ + + TI V L+ AG
Sbjct: 224 ESDILEKVKEHQESMDINNPR-DFIDCF-LIKMEKEKQNQQSEFTIENLVITAADLLGAG 281
Query: 331 LDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRL 390
+TT+ TL + + LLL H ++ KVQ E++ VG R D ++ Y A + E R
Sbjct: 282 TETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRY 341
Query: 391 YPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKD 450
+P +PH + Y +P T +L ++ + D + + P F P FL + +
Sbjct: 342 IDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGN 401
Query: 451 IDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFAT 495
+PF +G+R+C G A + + +LQ F+ +
Sbjct: 402 FKKSNY---FMPFSAGKRICVGEGLARMELFLFLTFILQNFNLKS 443
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 203/463 (43%), Gaps = 28/463 (6%)
Query: 41 LRKYTSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALV 100
+ K TS + P PVIG++ +G + + + L +++ YGP+FT+ G+ +V
Sbjct: 1 MAKKTSSGRGKLPPGPTPLPVIGNILQIGIKD-ISKSLTNLSKVYGPVFTLYFGLKPIVV 59
Query: 101 VSSWEMAKECLTTNDKIFASRPKTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLSN 160
+ +E KE L + F+ R E F + FS G W E R+ + L L N
Sbjct: 60 LHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIV-FS-NGKKWKEIRRFS-LMTLRN 116
Query: 161 HRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCN 220
+ K R + D V+ + L E K+K++ + NVI +I K +
Sbjct: 117 FGMGK-RSIED-RVQEEARCLVEELRKTKASP---CDPTFILGCAPCNVICSIIFHKRFD 171
Query: 221 SVDSEEWMELLTRFLE----MSGKFV--VSDALPFLRWLDIGGDERSMKKTAKELDIVVQ 274
D ++++ L+ + E +S ++ ++ P + + G + K + +
Sbjct: 172 YKD-QQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP--GTHNKLLKNVAFMKSYIL 228
Query: 275 GWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN--KAVCLGLIIAGLD 332
+EH+ D + DF+ + + E+++ TI + + L AG +
Sbjct: 229 EKVKEHQESMDMNNPQ----DFIDCFLMKM-EKEKHNQPSEFTIESLENTAVDLFGAGTE 283
Query: 333 TTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYP 392
TT+ TL + + LLL H ++ KVQ E++ +G R D ++ Y A + E R
Sbjct: 284 TTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYID 343
Query: 393 AVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDID 452
+P +PH + Y +P T +LI++ + D + + P F P FL + +
Sbjct: 344 LLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFK 403
Query: 453 VRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFAT 495
+ +PF +G+R+C G + A + + S+LQ F+ +
Sbjct: 404 ---KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKS 443
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 204/456 (44%), Gaps = 32/456 (7%)
Query: 70 GPEPLHRVLGSMADKYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFASRPKTLAMEI 129
G L V A KYGP+ + + +++V+S E K+ L + S+ +
Sbjct: 8 GGRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTV 67
Query: 130 LGYNFSMFGFSPYGSY--WCETRKIATLELLSNHRLEKLRHVRDYEVKTCLKELYELWDK 187
G G +Y W + R++ L S L L + + + ++ L +
Sbjct: 68 FGERLFGQGLVSECNYERWHKQRRVIDLAF-SRSSLVSLMETFNEKAEQLVEIL-----E 121
Query: 188 SKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDAL 247
+K+ + V M+ T +++ + G + + + + L++ +++ + + +
Sbjct: 122 AKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQ--KPLSQAVKLMLEGITASRN 179
Query: 248 PFLRWLDIGGDERSMKKTAKELDIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDT 307
++L G + +++ + + + Q + +R+R++ + +GEE+ ++ IL
Sbjct: 180 TLAKFLP--GKRKQLREVRESIRFLRQVGRDWVQRRREALK-RGEEVP-ADILTQIL-KA 234
Query: 308 EQYSGRDVDTINKAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKR 367
E+ + D ++ V IAG +T+ L + + L +I+ ++Q E+D +G+KR
Sbjct: 235 EEGAQDDEGLLDNFVTF--FIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKR 292
Query: 368 QVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECT-VNGYHVPARTQLLINVWKL 426
++ DL L YL LKE++RLYP P +EE T ++G VP T LL + + +
Sbjct: 293 YLDFEDLGRLQYLSQVLKESLRLYP--PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVM 350
Query: 427 QRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIAS 486
R +E+P F P+RF PF G R C G FA ++ +A
Sbjct: 351 GRMDTYFEDPLTFNPDRF-----GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAK 405
Query: 487 LLQGFDFATPSNEPLDMGEGFGLTMEKS-RPLEVLI 521
LLQ +F L G+ FGL + + +PL+ ++
Sbjct: 406 LLQRLEFR------LVPGQRFGLQEQATLKPLDPVL 435
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 106/203 (52%), Gaps = 14/203 (6%)
Query: 323 CLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQA 382
+ ++ G +T T+ W++ L +H + D++++E++ G R V D++ L +
Sbjct: 268 VVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG-GRPVAFEDVRKLRHTGN 326
Query: 383 TLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPE 442
+ EAMRL PAV +L A+ E + GY +PA ++ + + +QRDP+ +++ +F P+
Sbjct: 327 VIVEAMRLRPAVWVLT-RRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPD 385
Query: 443 RFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDF--ATPSNEP 500
R+L + + PF +G+R CP F++ + A+L + F SN+
Sbjct: 386 RWLPERA---ANVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDA 442
Query: 501 LDMGEGFGLTMEKSRPLEVLIAP 523
+ + G+T+ RP ++L+ P
Sbjct: 443 VRV----GITL---RPHDLLVRP 458
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 223 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 280
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 281 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 335
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 336 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 390
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R CPG FAL + +L+ FDF +N LD+ E L E
Sbjct: 391 -FKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 193/415 (46%), Gaps = 37/415 (8%)
Query: 85 YGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFASR-PKTLAMEILGYNFSMFGFSPYG 143
YG + I L++S + N ++SR L ++ +G + F+
Sbjct: 81 YGEFMRVWISGEETLIISKSSSMFHIMKHNH--YSSRFGSKLGLQCIGMHEKGIIFNNNP 138
Query: 144 SYWCETRKIATLELLSNHRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFA 203
W TR ++ LS L ++ V +KT L L E+ ++S + +L ++R
Sbjct: 139 ELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVD-VLTLLRRVML 196
Query: 204 DTIRNVILRMIVGKGCNSVDSEEWMELLTRFLEMSGKFVVSDALPFLRWLDIGGDERSMK 263
DT + LR+ + + V + + + L + D + WL + +
Sbjct: 197 DTSNTLFLRIPLDESAIVVKIQGYFDAWQALL------IKPDIFFKISWL-----YKKYE 245
Query: 264 KTAKELDIVVQGWFEEHKRKRDSREVKGEE-LDFMS--VMPSILGDTEQYSGRDVDTINK 320
K+ K+L ++ E KR+R S E K EE +DF + ++ GD + + +N+
Sbjct: 246 KSVKDLKDAIEVLIAE-KRRRISTEEKLEECMDFATELILAEKRGDLTR------ENVNQ 298
Query: 321 AVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYL 380
+ L ++IA DT +V+L +++ L+ H ++ + + E+ +G +R + D++ L +
Sbjct: 299 CI-LEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVM 356
Query: 381 QATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQ 440
+ + E+MR P V L++ +A+E+ ++GY V T +++N+ ++ R + +P +F
Sbjct: 357 ENFIYESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFFPKPNEFT 414
Query: 441 PERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFAT 495
E F K++ R PFG G R C G A+ +M+ + +LL+ F T
Sbjct: 415 LENFA---KNVPYR----YFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKT 462
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 26/258 (10%)
Query: 270 DIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIA 329
DI Q ++ E ++K D+ ++ +LGD++ S D+ KA ++
Sbjct: 235 DIYTQNFYWELRQKGSVHH------DYRGILYRLLGDSKM-SFEDI----KANVTEMLAG 283
Query: 330 GLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLV----YLQATLK 385
G+DTT++TL W L R++ KVQ+ L +V R + D+ ++ L+A++K
Sbjct: 284 GVDTTSMTLQW--HLYEMARNL--KVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIK 339
Query: 386 EAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFL 445
E +RL+P + + + + + + Y +PA+T + + ++ L R+P + +P F P R+L
Sbjct: 340 ETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWL 398
Query: 446 TKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGE 505
+K K+I + L FG G R C G A M + ++L+ +F D+G
Sbjct: 399 SKDKNI----TYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLE--NFRVEIQHLSDVGT 452
Query: 506 GFGLTMEKSRPLEVLIAP 523
F L + +P+ P
Sbjct: 453 TFNLILMPEKPISFTFWP 470
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 26/258 (10%)
Query: 270 DIVVQGWFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIA 329
DI Q ++ E ++K D+ ++ +LGD++ S D+ KA ++
Sbjct: 238 DIYTQNFYWELRQKGSVHH------DYRGILYRLLGDSKM-SFEDI----KANVTEMLAG 286
Query: 330 GLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLV----YLQATLK 385
G+DTT++TL W L R++ KVQ+ L +V R + D+ ++ L+A++K
Sbjct: 287 GVDTTSMTLQW--HLYEMARNL--KVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIK 342
Query: 386 EAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFL 445
E +RL+P + + + + + + Y +PA+T + + ++ L R+P + +P F P R+L
Sbjct: 343 ETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWL 401
Query: 446 TKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGE 505
+K K+I + L FG G R C G A M + ++L+ +F D+G
Sbjct: 402 SKDKNI----TYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLE--NFRVEIQHLSDVGT 455
Query: 506 GFGLTMEKSRPLEVLIAP 523
F L + +P+ P
Sbjct: 456 TFNLILMPEKPISFTFWP 473
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 225 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 282
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P VP +
Sbjct: 283 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTVPAFSLY 337
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 338 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 392
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 393 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 445
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQH- 388
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 225 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 282
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 283 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 337
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 338 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 392
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 393 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 445
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 223 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 280
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 281 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 335
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 336 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 390
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 391 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 223 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 280
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 281 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 335
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 336 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 390
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 391 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAV-CLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L KV E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKVAEEATRVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + ++++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQH- 388
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 225 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 282
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 283 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTSPAFSLY 337
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 338 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 392
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 393 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 445
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 223 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 280
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 281 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPPFSLY 335
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 336 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 390
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 391 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 113/231 (48%), Gaps = 20/231 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ LT+ +
Sbjct: 223 DRKASGEQSD--DLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYF 280
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+R++P P +
Sbjct: 281 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRIWPTAPAFSLY 335
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD VW + + F+PERF ++ QH
Sbjct: 336 -AKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF----ENPSAIPQHA 390
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGL 509
PFG+G+R C G FAL + +L+ FDF +N LD+ E L
Sbjct: 391 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIEETLTL 440
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
P+G+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG + T+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 228 DRKASGEQSD--DLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYF 285
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 286 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 340
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + ++++ + +L RD +W + + F+PERF ++ QH
Sbjct: 341 -AKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 395
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 396 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 448
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG + T+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG + T+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG + T+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +I G +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +I G +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +I G +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +I G +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +I G +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +I G +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG ++T+ L++ +
Sbjct: 223 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYF 280
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 281 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 335
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 336 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQH- 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKPE 443
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG ++T+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQH- 388
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLLLKPE 442
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
P+G+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 20/227 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG ++T+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGE 505
PFG+G+R C G FAL + +L+ FDF +N LD+ E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKE 435
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
P G+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 320 KAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVY 379
K L L+ AG +T T L+ LL H DI ++V+ E + ++ +++ LK + Y
Sbjct: 245 KDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQN-KLQLSQELTAETLKKMPY 303
Query: 380 LQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKF 439
L L+E +RL P V E I++C G+H P + + + DP ++ +P KF
Sbjct: 304 LDQVLQEVLRLIPPVGGGF-RELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKF 362
Query: 440 QPERFLTKHKDIDVRGQH---LELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFA-- 494
PERF D H +PFG G R C G FA M+ L+Q FD+
Sbjct: 363 DPERFTP-----DGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLL 417
Query: 495 ---------TPSNEPLD 502
TPS P D
Sbjct: 418 PGQNLELVVTPSPRPKD 434
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + +IAG +TT+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
P G+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + + AG + T+ L++ +
Sbjct: 223 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYF 280
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 281 LVKNPHELQKAAEEAARVLVDPVPSHKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 335
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD VW + + F+PERF ++ QH
Sbjct: 336 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF----ENPSAIPQHA 390
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 391 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 443
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + + AG + T+ L++ +
Sbjct: 223 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYF 280
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 281 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTGPAFSLY 335
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 336 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 390
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 391 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKPE 443
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + + AG + T+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + +L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHVLQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTGPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLVLKPE 442
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 20/234 (8%)
Query: 286 SREVKGEELDFMSVMPSILGDTEQYSGRDVDTIN-KAVCLGLIIAGLDTTTVTLTWVISL 344
R+ GE+ D ++ +L + +G +D N + + + AG + T+ L++ +
Sbjct: 222 DRKASGEQSD--DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYF 279
Query: 345 LLNHRDILDKVQNE----LDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPH 400
L+ + L K E L V + +QV K L Y+ L EA+RL+P P +
Sbjct: 280 LVKNPHELQKAAEEAARVLVDPVPSYKQV-----KQLKYVGMVLNEALRLWPTAPAFSLY 334
Query: 401 EAIEECTVNG-YHVPARTQLLINVWKLQRDPRVWEEPCK-FQPERFLTKHKDIDVRGQHL 458
A E+ + G Y + +L++ + +L RD +W + + F+PERF ++ QH
Sbjct: 335 -AKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF----ENPSAIPQHA 389
Query: 459 ELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEPLDMGEGFGLTME 512
PFG+G+R C G FAL + +L+ FDF +N LD+ E L E
Sbjct: 390 -FKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE 442
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 320 KAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLV- 378
KA ++ G++TT++TL W + + ++ + ++ E+ + +RQ E D+ ++
Sbjct: 278 KANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEV---LNARRQA-EGDISKMLQ 333
Query: 379 ---YLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEE 435
L+A++KE +RL+P + + + + + Y +PA+T + + ++ + RDP +
Sbjct: 334 MVPLLKASIKETLRLHP-ISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSS 392
Query: 436 PCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFAT 495
P KF P R+L+K KD+ H L FG G R C G A M + +L+ +F
Sbjct: 393 PDKFDPTRWLSKDKDL----IHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILE--NFKV 446
Query: 496 PSNEPLDMGEGFGLTMEKSRPLEVLIAP 523
D+ F L + +P+ ++ P
Sbjct: 447 EMQHIGDVDTIFNLILTPDKPIFLVFRP 474
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 189/437 (43%), Gaps = 36/437 (8%)
Query: 60 PVIGHLHILGGPEPLHRVLGSMADKYGPIFTIK-IGINRALVVSSWEMAKECLTTNDKIF 118
P +GH I G P+ L + +KYGP+F+ +G ++ S A + N+ +
Sbjct: 21 PFLGHA-IAFGKSPI-EFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLN 78
Query: 119 ASRPKT-LAMEILGYNFSMFGFSPYGSYWCETRKIATLELLSNHRLEKLRHVRDYEVKTC 177
A + L + G + +P + E +K+ L H + HV E +T
Sbjct: 79 AEDVYSRLTTPVFGKGVAYDVPNPV---FLEQKKMLKSGLNIAHFKQ---HVSIIEKET- 131
Query: 178 LKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNSVDSEEWMELLTRFLEM 237
KE +E W +S N ++ I + GK S +E+ +L + ++
Sbjct: 132 -KEYFESWGESGEKNVF-----EALSELIILTASHCLHGKEIRSQLNEKVAQL---YADL 182
Query: 238 SGKFVVSDALPFLRWLDIGGDERSMKKTAKELDIVVQGWFEEHKRKRDSREVKGEELDFM 297
G F + L WL + R + + DI +++ +++R S+E ++D
Sbjct: 183 DGGFSHAAWL-LPGWLPLPSFRRRDRAHREIKDI----FYKAIQKRRQSQE----KID-- 231
Query: 298 SVMPSILGDTEQYSGRDVDTINKAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQN 357
++ ++L T + D + +GL++AG T++ T W+ L + + K
Sbjct: 232 DILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYL 291
Query: 358 ELDIQVGTK-RQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPAR 416
E G + LK+L L +KE +RL P + +++ A TV GY +P
Sbjct: 292 EQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMM-RMARTPQTVAGYTIPPG 350
Query: 417 TQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFA 476
Q+ ++ QR W E F P+R+L +D G+ +PFG+GR C G +FA
Sbjct: 351 HQVCVSPTVNQRLKDSWVERLDFNPDRYL---QDNPASGEKFAYVPFGAGRHRCIGENFA 407
Query: 477 LQVMQFTIASLLQGFDF 493
++ +++L+ ++F
Sbjct: 408 YVQIKTIWSTMLRLYEF 424
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 321 AVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYL 380
+ + ++ AG T++ T +W + L+ HRD V +ELD G R V+ L+ + L
Sbjct: 248 GMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQL 307
Query: 381 QATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQ 440
+ LKE +RL+P + +L+ A E V G+ + + + R P + +P F
Sbjct: 308 ENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFV 366
Query: 441 PERF-LTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDF 493
P R+ + +D+ R +PFG+GR C G +FA+ ++ + LL+ ++F
Sbjct: 367 PARYEQPRQEDLLNR---WTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 324 LGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQAT 383
+ ++ AG T++ T +W + L+ HRD V +ELD G R V+ L+ + L+
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENV 310
Query: 384 LKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPER 443
LKE +RL+P + +L+ A E V G+ + + + R P + +P F P R
Sbjct: 311 LKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 444 F-LTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDF 493
+ + +D+ R +PFG+GR C G +FA+ ++ + LL+ ++F
Sbjct: 370 YEQPRQEDLLNR---WTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 324 LGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQAT 383
+ ++ AG T++ T +W + L+ HRD V +ELD G R V+ L+ + L+
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENV 310
Query: 384 LKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPER 443
LKE +RL+P + +L+ A E V G+ + + + R P + +P F P R
Sbjct: 311 LKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 444 F-LTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDF 493
+ + +D+ R +PFG+GR C G +FA+ ++ + LL+ ++F
Sbjct: 370 YEQPRQEDLLNR---WTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 324 LGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQAT 383
+ ++ AG T++ T +W + L+ HRD V +ELD G R V+ L+ + L+
Sbjct: 251 ISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENV 310
Query: 384 LKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPER 443
LKE +RL+P + +L+ A E V G+ + + + R P + +P F P R
Sbjct: 311 LKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPAR 369
Query: 444 F-LTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDF 493
+ + +D+ R +PFG+GR C G +FA+ ++ + LL+ ++F
Sbjct: 370 YEQPRQEDLLNR---WTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEF 417
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 196/457 (42%), Gaps = 50/457 (10%)
Query: 48 KKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALVVSSWEMA 107
K + P G P +GH+ I G +PL +L + KYG IFT+ I NR VV
Sbjct: 1 KGKLPPVVHGTTPFVGHI-IQFGKDPLGFMLKA-KKKYGGIFTMNICGNRITVVGDVHQH 58
Query: 108 KECLTTNDKIFASRPKTLAMEILGYNFSMFGFS-PYGSYWCETRKIATL--ELLSNHRLE 164
+ T ++I + R E+ + +FG Y + + R+ E L+ + +
Sbjct: 59 SKFFTPRNEILSPR------EVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKFQ 112
Query: 165 KLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNS-VD 223
+EV+ +K W+K + +L + + I N + + G+ +D
Sbjct: 113 NFAPSIQHEVRKFMKAN---WNKDEGEINILDDC----SAMIINTACQCLFGEDLRKRLD 165
Query: 224 SEEWMELLTRFLEMSGKFVVSDALPFLRWLDIGGDERSMKKTAKELDIVVQGWFEEHKRK 283
+ ++ +LL + S + LP++ L + R A+ DI+ + K
Sbjct: 166 ARQFAQLLAKM--ESCLIPAAVFLPWILKLPLPQSYRCRDARAELQDILSEIIIAREK-- 221
Query: 284 RDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIA----GLDTTTVTLT 339
E ++ + ++ +LG RD +++ G+I+A G T+T+T T
Sbjct: 222 ----EEAQKDTNTSDLLAGLLGAVY----RDGTRMSQHEVCGMIVAAMFAGQHTSTITTT 273
Query: 340 WVISLLLNHRDI--LDKVQNELDIQVGTKRQVNESD-LKNLVYLQATLKEAMRLYPAVPL 396
W + L++ R+ L K+ E+D Q+N + ++ + + + +E++R P + +
Sbjct: 274 WSLLHLMDPRNKRHLAKLHQEID---EFPAQLNYDNVMEEMPFAEQCARESIRRDPPLVM 330
Query: 397 LIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQ 456
L+ + ++ V Y VP + + +D + P ++ PER + K +D
Sbjct: 331 LM-RKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNM---KLVDG--- 383
Query: 457 HLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDF 493
FG+G C G F L ++ +A++L+ +DF
Sbjct: 384 --AFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDF 418
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 320 KAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVY 379
KA + L +DTT L + L + D+ ++ E + + + L
Sbjct: 279 KANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPL 338
Query: 380 LQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKF 439
L+A LKE +RLYP V L + + + YH+PA T + + ++ L R+ ++ P ++
Sbjct: 339 LRAALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERY 397
Query: 440 QPERFLTKHKDIDVRGQHLELLPFGSGRRMCPG 472
P+R+L DI G++ +PFG G R C G
Sbjct: 398 NPQRWL----DIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 191/469 (40%), Gaps = 70/469 (14%)
Query: 46 SKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKI-GINRALVVSSW 104
++++ P G P +GH G + + L M +K+G IFT++ G+ +++ S
Sbjct: 14 TRRRNEPPLDKGMIPWLGHALEFG--KDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDS- 70
Query: 105 EMAKECLTTNDKIFASRPKTLAMEILGYN-FSMFGFSPYGSYWCETRKI------ATLEL 157
C AS +T ++L F+M P + E ++ A+L
Sbjct: 71 ----NCYDAVLSDVASLDQTSYAQVLMKRIFNMI--LPSHNPESEKKRAEMHFQGASLTQ 124
Query: 158 LSNHRLEKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGK 217
LSN LR + + ++M ++ W D + N+ ++
Sbjct: 125 LSNSMQNNLRLL-------------------MTPSEMGLKTSEWKKDGLFNLCYSLLFKT 165
Query: 218 GCNSVDSEEWME--LLTRFLEMSGKFVVSDALPFLRWLDIGGDERSMKKTAKELDIVVQG 275
G +V E LT+ E +F LP L + +E+ + A+E +
Sbjct: 166 GYLTVFGAENNNSAALTQIYEEFRRF--DKLLPKLARTTVNKEEKQIASAARE---KLWK 220
Query: 276 WFEEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIAGLDTTT 335
W R RE S + S + Q G D + +A+ L L + +
Sbjct: 221 WLTPSGLDRKPRE--------QSWLGSYVKQL-QDEGIDAEMQRRAMLLQLWVTQGNAGP 271
Query: 336 VTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVP 395
WV+ LL H + L V+ E IQ G ++ E KN + L E +RL A
Sbjct: 272 AAF-WVMGYLLTHPEALRAVREE--IQGGKHLRLEERQ-KNTPVFDSVLWETLRLTAAA- 326
Query: 396 LLIPHEAIEE---CTVNG--YHVPARTQLLINVW-KLQRDPRVWEEPCKFQPERFL---- 445
LI + ++ C NG YH+ +L + + Q DP++ ++P FQ +RFL
Sbjct: 327 -LITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADR 385
Query: 446 TKHKDIDVRGQHLEL--LPFGSGRRMCPGVSFALQVMQFTIASLLQGFD 492
T+ KD G ++ +P+G+ +CPG FA+ ++ + ++L FD
Sbjct: 386 TEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFD 434
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 191/460 (41%), Gaps = 50/460 (10%)
Query: 45 TSKKKRGAPEAGGAWPVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALVVSSW 104
TS K + P P +GH+ + G PL + D +FTI IG R +V
Sbjct: 2 TSGKGKLPPVYPVTVPFLGHI-VQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDP 60
Query: 105 EMAKECLTTNDKIFASRP-KTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLSNHRL 163
+ ++I + R T+ + G + +PY + +A E L+ +
Sbjct: 61 HEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYA--APYPRMREQLNFLA--EELTIAKF 116
Query: 164 EKLRHVRDYEVKTCLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNS-V 222
+ +EV+ K + E W + + +L + I N + + G+ +
Sbjct: 117 QNFVPAIQHEVR---KFMAENWKEDEGVINLLEDC----GAMIINTACQCLFGEDLRKRL 169
Query: 223 DSEEWMELLTRFLEMSGKFVVSDALPFLRWLDIGGDERSMKKTAKEL-----DIVVQGWF 277
++ + +LL++ S + +P+L L + R + A EL +I+V
Sbjct: 170 NARHFAQLLSKM--ESSLIPAAVFMPWLLRLPLPQSARCREARA-ELQKILGEIIVAREK 226
Query: 278 EEHKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIAGLDTTTVT 337
EE + ++ ++ G ++ ++ D + S +V + + + AG T+T+T
Sbjct: 227 EEASKDNNTSDLLG------GLLKAVYRDGTRMSLHEV----CGMIVAAMFAGQHTSTIT 276
Query: 338 LTWVISLLLNHRDI--LDKVQNELDIQVGTKRQVNESD-LKNLVYLQATLKEAMRLYPAV 394
+W + L++ ++ LDK+ E+D Q+N + + + + + ++E++R P
Sbjct: 277 TSWSMLHLMHPKNKKWLDKLHKEID---EFPAQLNYDNVMDEMPFAERCVRESIRRDP-- 331
Query: 395 PLLIPHEAIE-ECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDV 453
PLL+ ++ E V Y VP + + D + P + PER D V
Sbjct: 332 PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKV 385
Query: 454 RGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDF 493
G + FG+G C G FAL ++ +A+ + +DF
Sbjct: 386 DGA---FIGFGAGVHKCIGQKFALLQVKTILATAFREYDF 422
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 384 LKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPER 443
++E R YP P L ++ N T +L++++ DPR+W+ P +F+PER
Sbjct: 280 VQEVRRYYPFGPFLGAL-VKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPER 338
Query: 444 FLTKHKDIDVRGQHLELLPFGSGR----RMCPGVSFALQVMQFTIASLLQGFDFATPSN 498
F + +++ +++P G G CPG ++VM+ ++ L+ ++ P
Sbjct: 339 FAEREENL------FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQ 391
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 186/445 (41%), Gaps = 50/445 (11%)
Query: 60 PVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFA 119
P +GH+ + G PL + D +FTI IG R +V + ++I +
Sbjct: 26 PFLGHI-VQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILS 84
Query: 120 SRP-KTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLSNHRLEKLRHVRDYEVKTCL 178
R T+ + G + +PY + +A E L+ + + +EV+
Sbjct: 85 PREVYTIMTPVFGEGVAYA--APYPRMREQLNFLA--EELTIAKFQNFVPAIQHEVR--- 137
Query: 179 KELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNS-VDSEEWMELLTRFLEM 237
K + E W + + +L + I N + + G+ +++ + +LL++
Sbjct: 138 KFMAENWKEDEGVINLLEDC----GAMIINTACQCLFGEDLRKRLNARHFAQLLSKM--E 191
Query: 238 SGKFVVSDALPFLRWLDIGGDERSMKKTAKEL-----DIVVQGWFEEHKRKRDSREVKGE 292
S + +P+L L + R + A EL +I+V EE + ++ ++ G
Sbjct: 192 SSLIPAAVFMPWLLRLPLPQSARCREARA-ELQKILGEIIVAREKEEASKDNNTSDLLG- 249
Query: 293 ELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIAGLDTTTVTLTWVISLLLNHRDI- 351
++ ++ D + S +V + + + AG T+T+T +W + L++ ++
Sbjct: 250 -----GLLKAVYRDGTRMSLHEV----CGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKK 300
Query: 352 -LDKVQNELDIQVGTKRQVNESD-LKNLVYLQATLKEAMRLYPAVPLLIPHEAIE-ECTV 408
LDK+ E+D Q+N + + + + + ++E++R P PLL+ ++ E V
Sbjct: 301 WLDKLHKEID---EFPAQLNYDNVMDEMPFAERCVRESIRRDP--PLLMVMRMVKAEVKV 355
Query: 409 NGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRR 468
Y VP + + D + P + PER D V G + FG+G
Sbjct: 356 GSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKVDGA---FIGFGAGVH 406
Query: 469 MCPGVSFALQVMQFTIASLLQGFDF 493
C G FAL ++ +A+ + +DF
Sbjct: 407 KCIGQKFALLQVKTILATAFREYDF 431
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 94/445 (21%), Positives = 186/445 (41%), Gaps = 50/445 (11%)
Query: 60 PVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFA 119
P +GH+ + G PL + D +FTI IG R +V + ++I +
Sbjct: 11 PFLGHI-VQFGKNPLEFMQRCKRDLKSGVFTISIGGQRVTIVGDPHEHSRFFSPRNEILS 69
Query: 120 SRP-KTLAMEILGYNFSMFGFSPYGSYWCETRKIATLELLSNHRLEKLRHVRDYEVKTCL 178
R T+ + G + +PY + +A E L+ + + +EV+
Sbjct: 70 PREVYTIMTPVFGEGVAYA--APYPRMREQLNFLA--EELTIAKFQNFVPAIQHEVR--- 122
Query: 179 KELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNS-VDSEEWMELLTRFLEM 237
K + E W + + +L + I N + + G+ +++ + +LL++
Sbjct: 123 KFMAENWKEDEGVINLLEDC----GAMIINTACQCLFGEDLRKRLNARHFAQLLSKM--E 176
Query: 238 SGKFVVSDALPFLRWLDIGGDERSMKKTAKEL-----DIVVQGWFEEHKRKRDSREVKGE 292
S + +P+L L + R + A EL +I+V EE + ++ ++ G
Sbjct: 177 SSLIPAAVFMPWLLRLPLPQSARCREARA-ELQKILGEIIVAREKEEASKDNNTSDLLG- 234
Query: 293 ELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIAGLDTTTVTLTWVISLLLNHRDI- 351
++ ++ D + S +V + + + AG T+T+T +W + L++ ++
Sbjct: 235 -----GLLKAVYRDGTRMSLHEV----CGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKK 285
Query: 352 -LDKVQNELDIQVGTKRQVNESD-LKNLVYLQATLKEAMRLYPAVPLLIPHEAIE-ECTV 408
LDK+ E+D Q+N + + + + + ++E++R P PLL+ ++ E V
Sbjct: 286 WLDKLHKEID---EFPAQLNYDNVMDEMPFAERCVRESIRRDP--PLLMVMRMVKAEVKV 340
Query: 409 NGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRR 468
Y VP + + D + P + PER D V G + FG+G
Sbjct: 341 GSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER------DEKVDGA---FIGFGAGVH 391
Query: 469 MCPGVSFALQVMQFTIASLLQGFDF 493
C G FAL ++ +A+ + +DF
Sbjct: 392 KCIGQKFALLQVKTILATAFREYDF 416
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 379 YLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCK 438
Y + ++E R YP P ++ A ++ G P Q++++++ D W +P +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVA-RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 439 FQPERFLTKHKDIDVRGQHLELLPFGSGRRM----CPGVSFALQVMQFTIASLLQGFDFA 494
F+PERF +D +P G G CPG L +M+ L+ +
Sbjct: 324 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 377
Query: 495 TPSNE 499
P +
Sbjct: 378 VPDQD 382
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 379 YLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCK 438
Y + ++E R YP P ++ A ++ G P Q++++++ D W +P +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVA-RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 439 FQPERFLTKHKDIDVRGQHLELLPFGSGRRM----CPGVSFALQVMQFTIASLLQGFDFA 494
F+PERF +D +P G G CPG L +M+ L+ +
Sbjct: 324 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 377
Query: 495 TPSNE 499
P +
Sbjct: 378 VPDQD 382
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 379 YLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCK 438
Y + ++E R YP P ++ A ++ G P Q++++++ D W +P +
Sbjct: 265 YAELFVQEVRRFYPFFPAVVA-RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 439 FQPERFLTKHKDIDVRGQHLELLPFGSGRRM----CPGVSFALQVMQFTIASLLQGFDFA 494
F+PERF +D +P G G CPG L +M+ L+ +
Sbjct: 324 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 377
Query: 495 TPSNE 499
P +
Sbjct: 378 VPDQD 382
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 30/162 (18%)
Query: 317 TINKAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKN 376
+++AV L ++AG +T LTW LLL+HR D Q ++V ES+
Sbjct: 211 ALSEAVTL--LVAGHETVASALTWSF-LLLSHRP---------DWQ----KRVAESEEAA 254
Query: 377 LVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGY-HVPARTQLLINVWKLQRDPRVWEE 435
L Q EA+RLYP P I +E + G +P T L+++ + QR + E
Sbjct: 255 LAAFQ----EALRLYP--PAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPE 306
Query: 436 PCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFAL 477
FQPERFL + R PFG G+R+C G FAL
Sbjct: 307 GEAFQPERFLAERGTPSGR-----YFPFGLGQRLCLGRDFAL 343
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 379 YLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCK 438
Y + ++E R YP P ++ A ++ G P Q++++++ D W +P +
Sbjct: 273 YAELFVQEVRRFYPFFPAVVA-RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 439 FQPERFLTKHKDIDVRGQHLELLPFGSGRRM----CPGVSFALQVMQFTIASLLQGFDFA 494
F+PERF +D +P G G CPG L +M+ L+ +
Sbjct: 332 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 385
Query: 495 TPSNE 499
P +
Sbjct: 386 VPDQD 390
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 379 YLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCK 438
Y + ++E R YP P ++ A ++ G P Q++++++ D W +P +
Sbjct: 273 YAELFVQEVRRFYPFFPAVVA-RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 439 FQPERFLTKHKDIDVRGQHLELLPFGSGRRM----CPGVSFALQVMQFTIASLLQGFDFA 494
F+PERF +D +P G G CPG L +M+ L+ +
Sbjct: 332 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 385
Query: 495 TPSNE 499
P +
Sbjct: 386 VPDQD 390
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 379 YLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCK 438
Y + ++E R YP P ++ A ++ G P Q++++++ D W +P +
Sbjct: 273 YAELFVQEVRRFYPFGPAVVA-RASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 439 FQPERFLTKHKDIDVRGQHLELLPFGSGRRM----CPGVSFALQVMQFTIASLLQGFDFA 494
F+PERF +D +P G G CPG L +M+ L+ +
Sbjct: 332 FRPERFRAWDED------SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYD 385
Query: 495 TPSNE 499
P +
Sbjct: 386 VPDQD 390
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 171/450 (38%), Gaps = 60/450 (13%)
Query: 60 PVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFA 119
P++GH+ I G PL + IFTI I R +V +++ +
Sbjct: 12 PILGHI-IQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLS 70
Query: 120 SRPKTLAMEILGYNFSMFGFS-PYGSYWCETRKIATL--ELLSNHRLEKLRHVRDYEVKT 176
R E+ + +FG Y + + R+ E L+ + + +EV+
Sbjct: 71 PR------EVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVR- 123
Query: 177 CLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNSVDSEEWMELLT--RF 234
K + WDK + +L + MI+ C + E+ + L RF
Sbjct: 124 --KFMAANWDKDEGEINLLEDCST------------MIINTACQCLFGEDLRKRLDARRF 169
Query: 235 LEMSGKFVVS--DALPFLRWLDIGGDERSMKKTAKELDIVVQGWFEEHKRKRDSREVKGE 292
++ K S A FL L +S + E +Q E R K E
Sbjct: 170 AQLLAKMESSLIPAAVFLPILLKLPLPQSAR--CHEARTELQKILSEIIIAR-----KEE 222
Query: 293 ELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIA----GLDTTTVTLTWVISLLLN- 347
E++ S +L RD ++ G+I+A G T+++T TW + L++
Sbjct: 223 EVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 282
Query: 348 ----HRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAI 403
H + L K E Q+ ++E + + + +E++R P + L++ + +
Sbjct: 283 ANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMRKVM 336
Query: 404 EECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPF 463
+ V Y VP + + D + EP ++ PER D V G + F
Sbjct: 337 ADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA---FIGF 387
Query: 464 GSGRRMCPGVSFALQVMQFTIASLLQGFDF 493
G+G C G F L ++ +A+ + +DF
Sbjct: 388 GAGVHKCIGQKFGLLQVKTILATAFRSYDF 417
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 171/450 (38%), Gaps = 60/450 (13%)
Query: 60 PVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFA 119
P++GH+ I G PL + IFTI I R +V +++ +
Sbjct: 13 PILGHI-IQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLS 71
Query: 120 SRPKTLAMEILGYNFSMFGFS-PYGSYWCETRKIATL--ELLSNHRLEKLRHVRDYEVKT 176
R E+ + +FG Y + + R+ E L+ + + +EV+
Sbjct: 72 PR------EVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVR- 124
Query: 177 CLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNSVDSEEWMELLT--RF 234
K + WDK + +L + MI+ C + E+ + L RF
Sbjct: 125 --KFMAANWDKDEGEINLLEDCST------------MIINTACQCLFGEDLRKRLDARRF 170
Query: 235 LEMSGKFVVS--DALPFLRWLDIGGDERSMKKTAKELDIVVQGWFEEHKRKRDSREVKGE 292
++ K S A FL L +S + E +Q E R K E
Sbjct: 171 AQLLAKMESSLIPAAVFLPILLKLPLPQSAR--CHEARTELQKILSEIIIAR-----KEE 223
Query: 293 ELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIA----GLDTTTVTLTWVISLLLN- 347
E++ S +L RD ++ G+I+A G T+++T TW + L++
Sbjct: 224 EVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 283
Query: 348 ----HRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAI 403
H + L K E Q+ ++E + + + +E++R P + L++ + +
Sbjct: 284 ANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMRKVM 337
Query: 404 EECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPF 463
+ V Y VP + + D + EP ++ PER D V G + F
Sbjct: 338 ADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA---FIGF 388
Query: 464 GSGRRMCPGVSFALQVMQFTIASLLQGFDF 493
G+G C G F L ++ +A+ + +DF
Sbjct: 389 GAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 171/450 (38%), Gaps = 60/450 (13%)
Query: 60 PVIGHLHILGGPEPLHRVLGSMADKYGPIFTIKIGINRALVVSSWEMAKECLTTNDKIFA 119
P++GH+ I G PL + IFTI I R +V +++ +
Sbjct: 26 PILGHI-IQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLS 84
Query: 120 SRPKTLAMEILGYNFSMFGFS-PYGSYWCETRKIATL--ELLSNHRLEKLRHVRDYEVKT 176
R E+ + +FG Y + + R+ E L+ + + +EV+
Sbjct: 85 PR------EVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVR- 137
Query: 177 CLKELYELWDKSKSTNKMLVEMKRWFADTIRNVILRMIVGKGCNSVDSEEWMELLT--RF 234
K + WDK + +L + MI+ C + E+ + L RF
Sbjct: 138 --KFMAANWDKDEGEINLLEDCST------------MIINTACQCLFGEDLRKRLDARRF 183
Query: 235 LEMSGKFVVS--DALPFLRWLDIGGDERSMKKTAKELDIVVQGWFEEHKRKRDSREVKGE 292
++ K S A FL L +S + E +Q E R K E
Sbjct: 184 AQLLAKMESSLIPAAVFLPILLKLPLPQSAR--CHEARTELQKILSEIIIAR-----KEE 236
Query: 293 ELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIA----GLDTTTVTLTWVISLLLN- 347
E++ S +L RD ++ G+I+A G T+++T TW + L++
Sbjct: 237 EVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHP 296
Query: 348 ----HRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAI 403
H + L K E Q+ ++E + + + +E++R P + L++ + +
Sbjct: 297 ANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPL-LMLMRKVM 350
Query: 404 EECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPF 463
+ V Y VP + + D + EP ++ PER D V G + F
Sbjct: 351 ADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER------DEKVEGA---FIGF 401
Query: 464 GSGRRMCPGVSFALQVMQFTIASLLQGFDF 493
G+G C G F L ++ +A+ + +DF
Sbjct: 402 GAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 322 VCLGLIIA----GLDTTTVTLTWVISLLLN-----HRDILDKVQNELDIQVGTKRQVNES 372
VC G+I+A G T+++T TW + L++ H + L K E Q+ ++E
Sbjct: 254 VC-GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE- 311
Query: 373 DLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRV 432
+ + + +E++R P + L++ + + + V Y VP + + D
Sbjct: 312 ----MPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEA 366
Query: 433 WEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFD 492
+ EP ++ PER D V G + FG+G C G F L ++ +A+ + +D
Sbjct: 367 FPEPRRWDPER------DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 417
Query: 493 F 493
F
Sbjct: 418 F 418
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 322 VCLGLIIA----GLDTTTVTLTWVISLLLN-----HRDILDKVQNELDIQVGTKRQVNES 372
VC G+I+A G T+++T TW + L++ H + L K E Q+ ++E
Sbjct: 255 VC-GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE- 312
Query: 373 DLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRV 432
+ + + +E++R P + L++ + + + V Y VP + + D
Sbjct: 313 ----MPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEA 367
Query: 433 WEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFD 492
+ EP ++ PER D V G + FG+G C G F L ++ +A+ + +D
Sbjct: 368 FPEPRRWDPER------DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 418
Query: 493 F 493
F
Sbjct: 419 F 419
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 322 VCLGLIIA----GLDTTTVTLTWVISLLLN-----HRDILDKVQNELDIQVGTKRQVNES 372
VC G+I+A G T+++T TW + L++ H + L K E Q+ ++E
Sbjct: 267 VC-GMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE- 324
Query: 373 DLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRV 432
+ + + +E++R P + L++ + + + V Y VP + + D
Sbjct: 325 ----MPFAERCARESIRRDPPL-LMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEA 379
Query: 433 WEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFD 492
+ EP ++ PER D V G + FG+G C G F L ++ +A+ + +D
Sbjct: 380 FPEPRRWDPER------DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYD 430
Query: 493 F 493
F
Sbjct: 431 F 431
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 32/176 (18%)
Query: 307 TEQYSG---RDVDTINKAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQV 363
T +Y G D D + A+ L +++A + TL +I LLN+ + ++ V
Sbjct: 246 TSEYEGMALSDKDIL--ALILNVLLAATEPADKTLALMIYHLLNNPEQMNDV-------- 295
Query: 364 GTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINV 423
L + + + E +R P V L IP + ++ V G + T + +
Sbjct: 296 ----------LADRSLVPRAIAETLRYKPPVQL-IPRQLSQDTVVGGMEIKKDTIVFCMI 344
Query: 424 WKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQH---LELLPFGSGRRMCPGVSFA 476
RDP +E QP+ F +D+ ++ L FGSG C G +FA
Sbjct: 345 GAANRDPEAFE-----QPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFA 395
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 382 ATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQP 441
A ++E MR P V L+ A ++ T+ + VP +L+ + RDP + P +F P
Sbjct: 291 AVIEETMRYDPPV-QLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDP 349
Query: 442 ERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFDFATPSNEP 500
+R +H L FG G C G A + +L F A S EP
Sbjct: 350 DRAQIRH------------LGFGKGAHFCLGAPLARLEATVALPALAARFPEARLSGEP 396
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 369 VNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVN----GYHVPARTQLLINVW 424
+++++L +L L + +KE++RL A L A E+ T++ Y++ + +
Sbjct: 318 LSQAELNDLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQ 375
Query: 425 KLQRDPRVWEEPCKFQPERFLTKHKDIDV----RGQHLEL--LPFGSGRRMCPGVSFAL- 477
+ DP ++ +P F+ +R+L ++ G L+ +PFGSG +CPG FA+
Sbjct: 376 LMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIH 435
Query: 478 QVMQFTIASL 487
++ QF I L
Sbjct: 436 EIKQFLILML 445
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 31/156 (19%)
Query: 321 AVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYL 380
++ L L++AG +T+ + LLL H D L V+ + S L N V
Sbjct: 233 SIALVLLLAGFETSVSLIGIGTYLLLTHPDQLALVRR------------DPSALPNAV-- 278
Query: 381 QATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQ 440
+E +R Y A P A EE + G +P + +L+ RDP+ + +P +F
Sbjct: 279 ----EEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 441 PERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFA 476
R D RG L FG G C G A
Sbjct: 334 VTR--------DTRGH----LSFGQGIHFCMGRPLA 357
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 115/291 (39%), Gaps = 68/291 (23%)
Query: 220 NSVDSEEWMELLTRFLEMSGKFVVSD---------------ALPFLRWLDIGGDERSMKK 264
+ V ++ ME+++ F FV+++ A ++ +D +++ +
Sbjct: 120 DQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTE 179
Query: 265 TAKELDIVVQGWFEE--HKRKRDSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINK-- 320
+ + +F+E KRKR ++ D +S++ GR+ D + +
Sbjct: 180 -GNIMAVQAMAYFKELIQKRKRHPQQ------DMISML---------LKGREKDKLTEEE 223
Query: 321 --AVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLV 378
+ C+ L IAG +TT ++ + LL H + L K++ D+ +GT
Sbjct: 224 AASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDL-IGT------------- 269
Query: 379 YLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCK 438
++E +R Y + + A E+ + G + Q+ + + RDP ++ P
Sbjct: 270 ----AVEECLR-YESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDV 324
Query: 439 FQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ 489
F R H L FG G +C G S A Q I +LLQ
Sbjct: 325 FDITRSPNPH------------LSFGHGHHVCLGSSLARLEAQIAINTLLQ 363
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 369 VNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVN----GYHVPARTQLLINVW 424
+++++L +L L + +KE++RL A L A E+ T++ Y++ + +
Sbjct: 318 LSQAELNDLPVLDSIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQ 375
Query: 425 KLQRDPRVWEEPCKFQPERFLTKHKDIDV----RGQHLEL--LPFGSGRRMCPGVSFAL- 477
+ DP ++ +P F+ +R+L ++ G L+ +PFGSG +CPG FA+
Sbjct: 376 LMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIH 435
Query: 478 QVMQFTIASL 487
++ QF I L
Sbjct: 436 EIKQFLILML 445
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 29/173 (16%)
Query: 320 KAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVY 379
+ + +++AG +TT L + H D K++ +N
Sbjct: 244 RTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK------------------ENPEL 285
Query: 380 LQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKF 439
++E +R P +P+ A E+ VNG +P T + + RDPRV+ + +F
Sbjct: 286 APQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF 345
Query: 440 QPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFD 492
DI V+ + + FG G C G + A + +A+L D
Sbjct: 346 ----------DITVK-REAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 387
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 30/162 (18%)
Query: 317 TINKAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKN 376
+++AV L ++AG +T LTW LLL+HR D Q ++V ES+
Sbjct: 211 ALSEAVTL--LVAGHETVASALTWSF-LLLSHRP---------DWQ----KRVAESEEAA 254
Query: 377 LVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGY-HVPARTQLLINVWKLQRDPRVWEE 435
L Q EA+RLYP P I +E + G +P T L+++ + QR + +
Sbjct: 255 LAAFQ----EALRLYP--PAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPD 306
Query: 436 PCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFAL 477
F+PERFL + R PFG G+R+C G FAL
Sbjct: 307 GEAFRPERFLEERGTPSGR-----YFPFGLGQRLCLGRDFAL 343
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 29/173 (16%)
Query: 320 KAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVY 379
+ + +++AG +TT L + H D K++ +N
Sbjct: 234 RTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIK------------------ENPEL 275
Query: 380 LQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKF 439
++E +R P +P+ A E+ VNG +P T + + RDPRV+ + +F
Sbjct: 276 APQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF 335
Query: 440 QPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGFD 492
DI V+ + + FG G C G + A + +A+L D
Sbjct: 336 ----------DITVK-REAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 377
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 31/156 (19%)
Query: 321 AVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYL 380
++ L L++AG +++ + LLL H D L V+ + S L N V
Sbjct: 233 SIALVLLLAGFESSVSLIGIGTYLLLTHPDQLALVRR------------DPSALPNAV-- 278
Query: 381 QATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQ 440
+E +R Y A P A EE + G +P + +L+ RDP+ + +P +F
Sbjct: 279 ----EEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 441 PERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFA 476
R D RG L FG G C G A
Sbjct: 334 VTR--------DTRGH----LSFGQGIHFCMGRPLA 357
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 31/156 (19%)
Query: 321 AVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYL 380
++ L L++AG +++ + LLL H D L V+ + S L N V
Sbjct: 232 SIALVLLLAGFESSVSLIGIGTYLLLTHPDQLALVRR------------DPSALPNAV-- 277
Query: 381 QATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQ 440
+E +R Y A P A EE + G +P + +L+ RDP+ + +P +F
Sbjct: 278 ----EEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 441 PERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFA 476
R D RG L FG G C G A
Sbjct: 333 VTR--------DTRGH----LSFGQGIHFCMGRPLA 356
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 62/156 (39%), Gaps = 31/156 (19%)
Query: 321 AVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYL 380
++ L L++AG + + + LLL H D L V+ + S L N V
Sbjct: 233 SIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRR------------DPSALPNAV-- 278
Query: 381 QATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQ 440
+E +R Y A P A EE + G +P + +L+ RDP+ + +P +F
Sbjct: 279 ----EEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 441 PERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFA 476
R D RG L FG G C G A
Sbjct: 334 VTR--------DTRGH----LSFGQGIHFCMGRPLA 357
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 62/156 (39%), Gaps = 31/156 (19%)
Query: 321 AVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYL 380
++ L L++AG + + + LLL H D L V+ + S L N V
Sbjct: 232 SIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRR------------DPSALPNAV-- 277
Query: 381 QATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQ 440
+E +R Y A P A EE + G +P + +L+ RDP+ + +P +F
Sbjct: 278 ----EEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 441 PERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFA 476
R D RG L FG G C G A
Sbjct: 333 VTR--------DTRGH----LSFGQGIHFCMGRPLA 356
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 36/167 (21%)
Query: 326 LIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLK 385
LII G +TTT + +I ++ + DI+D LKN ++
Sbjct: 185 LIIGGNETTTNLIGNMIRVIDENPDIIDDA------------------LKNR---SGFVE 223
Query: 386 EAMRLYPAVPLLIPHE-AIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERF 444
E +R Y + L PH A E+ +N + Q+++ + RD ++EP F+ R
Sbjct: 224 ETLRYYSPIQFL-PHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR- 281
Query: 445 LTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGF 491
R H L FG G MC G A + +L F
Sbjct: 282 ---------REMH---LAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 31/170 (18%)
Query: 322 VCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQ 381
C+ L+ AG +TTT L + L HRD+LD++ R ES
Sbjct: 247 TCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDEL-----------RTTPES-------TP 288
Query: 382 ATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQP 441
A ++E MR P V + A E+ + + +P ++++ + RDP + +P
Sbjct: 289 AAVEELMRYDPPV-QAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDP----- 342
Query: 442 ERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGF 491
+DV + FG G C G + A + + +LL G
Sbjct: 343 -------DVLDVHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALLDGI 385
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 98/268 (36%), Gaps = 44/268 (16%)
Query: 249 FLRWLDIGGDERSMKKTA------KELDIVVQGWFEEHKR---KRDSREVKGEELDFMSV 299
FL GG + M K+ +++ +V G E +R + + D +V
Sbjct: 204 FLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNPTDDVATV 263
Query: 300 MPSILGDTEQYSGRDVDTINKAVCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNEL 359
+ + + D E S RD + AG DTT+ + L D+ +V+ +
Sbjct: 264 IANAVVDGEPMSDRDT----AGYYIITASAGHDTTSASSAGAALALARDPDLFARVKAD- 318
Query: 360 DIQVGTKRQVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQL 419
+NL L ++EA+R V + A + + G + A L
Sbjct: 319 ---------------RNL--LPGIVEEAIRWTTPVQHFM-RTAATDTELCGQKIAAGDWL 360
Query: 420 LINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQV 479
++N DP + EP KF P R +H L FG+G C G+ A
Sbjct: 361 MLNYVAANHDPAQFPEPRKFDPTRPANRH------------LAFGAGSHQCLGLHLARLE 408
Query: 480 MQFTIASLLQGFDFATPSNEPLDMGEGF 507
M+ + LL D + EP + F
Sbjct: 409 MRVLLDVLLDRVDSLELAGEPKRVNSTF 436
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 419 LLINVWKLQRDPRVWEEPCKFQPERFL----TKHKDIDVRGQHLE--LLPFGSGRRMCPG 472
LL QRDP ++ +P F+ RFL ++ KD G+ L+ +P+G+G C G
Sbjct: 374 LLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLG 433
Query: 473 VSFALQ-VMQFTIASLLQ 489
S+A+ + QF L+
Sbjct: 434 RSYAVNSIKQFVFLVLVH 451
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 419 LLINVWKLQRDPRVWEEPCKFQPERFL----TKHKDIDVRGQHLE--LLPFGSGRRMCPG 472
LL QRDP ++ +P F+ RFL ++ KD G+ L+ +P+G+G C G
Sbjct: 362 LLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLG 421
Query: 473 VSFALQ-VMQFTIASLLQ 489
S+A+ + QF L+
Sbjct: 422 RSYAVNSIKQFVFLVLVH 439
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 30/164 (18%)
Query: 326 LIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLK 385
L++AG +TT + + LL+H D L ++ ++ + G ++ ++ + ++
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGA--------VEEMLRYEGPVE 311
Query: 386 EAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFL 445
A +P +E ++G +PA +L+ + R P + +P +F R
Sbjct: 312 SATYRFP----------VEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT 361
Query: 446 TKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ 489
H L FG G C G A + + +LL+
Sbjct: 362 AGH------------LAFGHGIHFCIGAPLARLEARIAVRALLE 393
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 30/164 (18%)
Query: 326 LIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLK 385
L++AG +TT + + LL+H D L ++ ++ + G ++ ++ + ++
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGA--------VEEMLRYEGPVE 311
Query: 386 EAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFL 445
A +P +E ++G +PA +L+ + R P + +P +F R
Sbjct: 312 SATYRFP----------VEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT 361
Query: 446 TKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ 489
H L FG G C G A + + +LL+
Sbjct: 362 AGH------------LAFGHGIHFCIGAPLARLEARIAVRALLE 393
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 34/182 (18%)
Query: 322 VCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQ 381
+ +GL++AG ++TT + + LL+ ++ +RQ+ L +
Sbjct: 247 LAIGLLVAGYESTTTQIADFVYLLMTRPEL--------------RRQL----LDRPELIP 288
Query: 382 ATLKEAMRLYP-AVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQ 440
+ ++E R P V +P A+E+ T+ G + A +L + RD + + +
Sbjct: 289 SAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRID 348
Query: 441 PERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ---GFDFATPS 497
+R +H L FG G C G A +Q + LLQ G P
Sbjct: 349 VDRTPNQH------------LGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPE 396
Query: 498 NE 499
+
Sbjct: 397 TQ 398
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 30/164 (18%)
Query: 326 LIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLK 385
L++AG +TT + + LL+H D L ++ ++ + G ++ ++ + ++
Sbjct: 260 LLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGA--------VEEMLRYEGPVE 311
Query: 386 EAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFL 445
A +P +E ++G +PA +L+ + R P + +P +F R
Sbjct: 312 SATYRFP----------VEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT 361
Query: 446 TKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ 489
H L FG G C G A + + +LL+
Sbjct: 362 AGH------------LAFGHGIHFCIGAPLARLEARIAVRALLE 393
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 35/188 (18%)
Query: 322 VCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQ 381
+ L L++AG +TT + L+ H + +D + L++ +
Sbjct: 236 IALVLLVAGHETTVNAIALGALTLIQHPEQIDVL------------------LRDPGAVS 277
Query: 382 ATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQP 441
++E +R + +V I A E+ V G + A +L+++ + RD + +E P F
Sbjct: 278 GVVEELLR-FTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDA 336
Query: 442 ERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASL---LQGFDFATPSN 498
R H + FG G C G + A ++ + L + G A P +
Sbjct: 337 RRNARHH------------VGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLD 384
Query: 499 E-PLDMGE 505
E P+ G
Sbjct: 385 EVPIKAGH 392
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 312 GRDVDTINKAVCLGLIIA-GLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVN 370
GRD T+++AV L +++ G + T + LLL+ ++ +++++E +I+ R ++
Sbjct: 223 GRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIR---PRAID 279
Query: 371 ESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDP 430
E L+ + + A + A+E+ + G + A + ++ RDP
Sbjct: 280 EL-LRWIPHRNAVGLSRI-------------ALEDVEIKGVRIRAGDAVYVSYLAANRDP 325
Query: 431 RVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ- 489
V+ +P + ER H + FG G CPG A + + ++L
Sbjct: 326 EVFPDPDRIDFERSPNPH------------VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Query: 490 --GFDFA-TPSNEPLDMG 504
G A P + P G
Sbjct: 374 VPGLKLAVAPEDVPFKKG 391
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 312 GRDVDTINKAVCLGLIIA-GLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVN 370
GRD T+++AV L +++ G + T + LLL+ ++ +++++E +I+ R ++
Sbjct: 223 GRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIR---PRAID 279
Query: 371 ESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDP 430
E L+ + + A + A+E+ + G + A + ++ RDP
Sbjct: 280 EL-LRWIPHRNAVGLSRI-------------ALEDVEIKGVRIRAGDAVYVSYLAANRDP 325
Query: 431 RVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ- 489
V+ +P + ER H + FG G CPG A + + ++L
Sbjct: 326 EVFPDPDRIDFERSPNPH------------VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Query: 490 --GFDFA-TPSNEPLDMG 504
G A P + P G
Sbjct: 374 VPGLKLAVAPEDVPFKKG 391
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 312 GRDVDTINKAVCLGLIIA-GLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVN 370
GRD T+++AV L +++ G + T + LLL+ ++ +++++E +I+ R ++
Sbjct: 223 GRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIR---PRAID 279
Query: 371 ESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDP 430
E L+ + + A + A+E+ + G + A + ++ RDP
Sbjct: 280 EL-LRWIPHRNAVGLSRI-------------ALEDVEIKGVRIRAGDAVYVSYLAANRDP 325
Query: 431 RVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ- 489
V+ +P + ER H + FG G CPG A + + ++L
Sbjct: 326 EVFPDPDRIDFERSPNPH------------VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Query: 490 --GFDFA-TPSNEPLDMG 504
G A P + P G
Sbjct: 374 VPGLKLAVAPEDVPFKKG 391
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 312 GRDVDTINKAVCLGLIIA-GLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVN 370
GRD T+++AV L +++ G + T + LLL+ ++ +++++E +I+ R ++
Sbjct: 223 GRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIR---PRAID 279
Query: 371 ESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDP 430
E L+ + + A + A+E+ + G + A + ++ RDP
Sbjct: 280 EL-LRWIPHRNAVGLSRI-------------ALEDVEIKGVRIRAGDAVYVSYLAANRDP 325
Query: 431 RVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ- 489
V+ +P + ER H + FG G CPG A + + ++L
Sbjct: 326 EVFPDPDRIDFERSPNPH------------VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Query: 490 --GFDFA-TPSNEPLDMG 504
G A P + P G
Sbjct: 374 VPGLKLAVAPEDVPFKKG 391
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 312 GRDVDTINKAVCLGLIIA-GLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVN 370
GRD T+++AV L +++ G + T + LLL+ ++ +++++E +I+ R ++
Sbjct: 223 GRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIR---PRAID 279
Query: 371 ESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDP 430
E L+ + + A + A+E+ + G + A + ++ RDP
Sbjct: 280 EL-LRWIPHRNAVGLSRI-------------ALEDVEIKGVRIRAGDAVYVSYLAANRDP 325
Query: 431 RVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ- 489
V+ +P + ER H + FG G CPG A + + ++L
Sbjct: 326 EVFPDPDRIDFERSPNPH------------VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Query: 490 --GFDFA-TPSNEPLDMG 504
G A P + P G
Sbjct: 374 VPGLKLAVAPEDVPFKKG 391
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 312 GRDVDTINKAVCLGLIIA-GLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVN 370
GRD T+++AV L +++ G + T + LLL+ ++ +++++E +I+ R ++
Sbjct: 223 GRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIR---PRAID 279
Query: 371 ESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDP 430
E L+ + + A + A+E+ + G + A + ++ RDP
Sbjct: 280 EL-LRWIPHRNAVGLSRI-------------ALEDVEIKGVRIRAGDAVYVSYLAANRDP 325
Query: 431 RVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ- 489
V+ +P + ER H + FG G CPG A + + ++L
Sbjct: 326 EVFPDPDRIDFERSPNPH------------VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Query: 490 --GFDFA-TPSNEPLDMG 504
G A P + P G
Sbjct: 374 VPGLKLAVAPEDVPFKKG 391
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 34/198 (17%)
Query: 312 GRDVDTINKAVCLGLIIA-GLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVN 370
GRD T+++AV L +++ G + T + LLL+ ++ +++++E +I+ R ++
Sbjct: 223 GRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIR---PRAID 279
Query: 371 ESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDP 430
E L+ + + A + A+E+ + G + A + ++ RDP
Sbjct: 280 EL-LRWIPHRNAVGLSRI-------------ALEDVEIKGVRIRAGDAVYVSYLAANRDP 325
Query: 431 RVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ- 489
V+ +P + ER H + FG G CPG A + + ++L
Sbjct: 326 EVFPDPDRIDFERSPNPH------------VSFGFGPHYCPGGMLARLESELLVDAVLDR 373
Query: 490 --GFDFA-TPSNEPLDMG 504
G A P + P G
Sbjct: 374 VPGLKLAVAPEDVPFKKG 391
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 34/182 (18%)
Query: 322 VCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQ 381
+ +GL++AG ++TT + + LL+ ++ +RQ+ L +
Sbjct: 247 LAIGLLVAGYESTTTQIADFVYLLMTRPEL--------------RRQL----LDRPELIP 288
Query: 382 ATLKEAMRLYP-AVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQ 440
+ ++E R P V P A+E+ T+ G + A +L + RD + + +
Sbjct: 289 SAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRID 348
Query: 441 PERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ---GFDFATPS 497
+R +H L FG G C G A +Q + LLQ G P
Sbjct: 349 VDRTPNQH------------LGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPE 396
Query: 498 NE 499
+
Sbjct: 397 TQ 398
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 15/101 (14%)
Query: 402 AIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELL 461
A+E+ V+G + A + ++ RDP V+ +P + +R H L
Sbjct: 300 ALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDPNPH------------L 347
Query: 462 PFGSGRRMCPGVSFALQVMQFTIASLLQ---GFDFATPSNE 499
+G+G C G A + + +LL+ G A P+ +
Sbjct: 348 AYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQ 388
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 34/182 (18%)
Query: 322 VCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQ 381
+ +GL++AG ++TT + + LL+ ++ +RQ+ L +
Sbjct: 247 LAIGLLVAGYESTTTQIADFVYLLMTRPEL--------------RRQL----LDRPELIP 288
Query: 382 ATLKEAMRLYP-AVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQ 440
+ ++E R P V P A+E+ T+ G + A +L + RD + + +
Sbjct: 289 SAVEELTRWVPLGVGTAAPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRID 348
Query: 441 PERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ---GFDFATPS 497
+R +H L FG G C G A +Q + LLQ G P
Sbjct: 349 VDRTPNQH------------LGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPE 396
Query: 498 NE 499
+
Sbjct: 397 TQ 398
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 15/101 (14%)
Query: 402 AIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELL 461
A+E+ V+G + A + ++ RDP V+ +P + +R H L
Sbjct: 300 ALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDPNPH------------L 347
Query: 462 PFGSGRRMCPGVSFALQVMQFTIASLLQ---GFDFATPSNE 499
+G+G C G A + + +LL+ G A P+ +
Sbjct: 348 AYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQ 388
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 62/171 (36%), Gaps = 34/171 (19%)
Query: 309 QYSGRDVDTINKA-VCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKR 367
+ GR +D A L++AG TTTV L ++ L H D
Sbjct: 240 EVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAA----------- 288
Query: 368 QVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKL- 426
++ + A ++E +R P P + + V G +PA +++N W L
Sbjct: 289 -------EDPGRIPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPA--DVMVNTWVLS 338
Query: 427 -QRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFA 476
RD ++P +F P R + L FG G C G A
Sbjct: 339 ANRDSDAHDDPDRFDPSR----------KSGGAAQLSFGHGVHFCLGAPLA 379
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 62/171 (36%), Gaps = 34/171 (19%)
Query: 309 QYSGRDVDTINKA-VCLGLIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKR 367
+ GR +D A L++AG TTTV L ++ L H D
Sbjct: 220 EVDGRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAA----------- 268
Query: 368 QVNESDLKNLVYLQATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKL- 426
++ + A ++E +R P P + + V G +PA +++N W L
Sbjct: 269 -------EDPGRIPAIVEEVLRYRPPFPQMQ-RTTTKATEVAGVPIPA--DVMVNTWVLS 318
Query: 427 -QRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFA 476
RD ++P +F P R + L FG G C G A
Sbjct: 319 ANRDSDAHDDPDRFDPSR----------KSGGAAQLSFGHGVHFCLGAPLA 359
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
Query: 405 ECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELLPFG 464
+ T+NG +P+ T ++ + RDP +++P F P R +H + FG
Sbjct: 311 DVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKPNRH------------ITFG 358
Query: 465 SGRRMCPGVSFA 476
G C G + A
Sbjct: 359 HGMHHCLGSALA 370
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 432 VWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ-- 489
V E F PE F R L FG G+ CPG + + Q I +LL+
Sbjct: 307 VLLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Query: 490 -GFDFATPSNE 499
G D A P ++
Sbjct: 367 PGVDLAVPIDQ 377
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 432 VWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ-- 489
V E F PE F R L FG G+ CPG + + Q I +LL+
Sbjct: 307 VLLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Query: 490 -GFDFATPSNE 499
G D A P ++
Sbjct: 367 PGVDLAVPIDQ 377
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 432 VWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ-- 489
V E F PE F R L FG G+ CPG + + Q I +LL+
Sbjct: 307 VLLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Query: 490 -GFDFATPSNE 499
G D A P ++
Sbjct: 367 PGVDLAVPIDQ 377
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 432 VWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ-- 489
V E F PE F R L FG G+ CPG + + Q I +LL+
Sbjct: 306 VLLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKM 365
Query: 490 -GFDFATPSNE 499
G D A P ++
Sbjct: 366 PGVDLAVPIDQ 376
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 432 VWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ-- 489
V E F PE F R L FG G+ CPG + + Q I +LL+
Sbjct: 307 VLLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Query: 490 -GFDFATPSNE 499
G D A P ++
Sbjct: 367 PGVDLAVPIDQ 377
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 432 VWEEPCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ-- 489
V E F PE F R L FG G+ CPG + + Q I +LL+
Sbjct: 307 VLLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKM 366
Query: 490 -GFDFATPSNE 499
G D A P ++
Sbjct: 367 PGVDLAVPIDQ 377
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 83/222 (37%), Gaps = 64/222 (28%)
Query: 285 DSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIAGLDTTTVTLTWVISL 344
D R E D ++++ D + S +++ A+ +I AG DTT + + +
Sbjct: 214 DERRRNPLENDVLTMLLQAEADGSRLSTKEL----VALVGAIIAAGTDTTIYLIAFAVLN 269
Query: 345 LLNHRDILDKVQ-------NELD--------IQVGTKRQVNESDLKNLVYLQATLKEAMR 389
LL + L+ V+ N LD +++GT R + +L Y A++K+
Sbjct: 270 LLRSPEALELVKAEPGLMRNALDEVLRFENILRIGTVRFARQ----DLEYCGASIKKGEM 325
Query: 390 LYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHK 449
++ LLIP RD V+ P F
Sbjct: 326 VF----LLIPSAL-------------------------RDGTVFSRPDVF---------- 346
Query: 450 DIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGF 491
DVR L +G G +CPGVS A + + ++ + F
Sbjct: 347 --DVRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 83/222 (37%), Gaps = 64/222 (28%)
Query: 285 DSREVKGEELDFMSVMPSILGDTEQYSGRDVDTINKAVCLGLIIAGLDTTTVTLTWVISL 344
D R E D ++++ D + S +++ A+ +I AG DTT + + +
Sbjct: 214 DERRRNPLENDVLTMLLQAEADGSRLSTKEL----VALVGAIIAAGTDTTIYLIAFAVLN 269
Query: 345 LLNHRDILDKVQ-------NELD--------IQVGTKRQVNESDLKNLVYLQATLKEAMR 389
LL + L+ V+ N LD +++GT R + +L Y A++K+
Sbjct: 270 LLRSPEALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQ----DLEYCGASIKKGEM 325
Query: 390 LYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHK 449
++ LLIP RD V+ P F
Sbjct: 326 VF----LLIPSAL-------------------------RDGTVFSRPDVF---------- 346
Query: 450 DIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGF 491
DVR L +G G +CPGVS A + + ++ + F
Sbjct: 347 --DVRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 43/116 (37%), Gaps = 27/116 (23%)
Query: 383 TLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQL-----LINVW--KLQRDPRVWEE 435
++EA+R P V + V V R Q+ L+ VW RD V+++
Sbjct: 243 AVEEALRFSPPV--------MRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKD 294
Query: 436 PCKFQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGF 491
P F P+R H L FGSG +C G A + + + F
Sbjct: 295 PDSFIPDRTPNPH------------LSFGSGIHLCLGAPLARLEARIALEEFAKKF 338
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 402 AIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELL 461
A + + G + Q++ +V DP EEP +F R H L
Sbjct: 292 ATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPH------------L 339
Query: 462 PFGSGRRMCPGVSFA---LQVMQFTIASLLQGFDFATPSNE 499
FG G C G A LQ++ T+ L G A P E
Sbjct: 340 AFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEE 380
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 402 AIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELL 461
A + + G + Q++ +V DP EEP +F R H L
Sbjct: 292 ATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPH------------L 339
Query: 462 PFGSGRRMCPGVSFA---LQVMQFTIASLLQGFDFATPSNE 499
FG G C G A LQ++ T+ L G A P E
Sbjct: 340 AFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEE 380
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 15/101 (14%)
Query: 402 AIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFLTKHKDIDVRGQHLELL 461
A + + G + Q++ +V DP EEP +F R H L
Sbjct: 292 ATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPH------------L 339
Query: 462 PFGSGRRMCPGVSFA---LQVMQFTIASLLQGFDFATPSNE 499
FG G C G A LQ++ T+ L G A P E
Sbjct: 340 AFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEE 380
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 15/123 (12%)
Query: 381 QATLKEAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQ 440
A ++E +R ++ A E+ V +PA L+++ L RD R
Sbjct: 276 SAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTA--- 332
Query: 441 PERF-LTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQGF---DFATP 496
+RF LT+ +H+ FG G +CPG + + + +L F D A P
Sbjct: 333 -DRFDLTRTSG----NRHIS---FGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVP 384
Query: 497 SNE 499
+ E
Sbjct: 385 AAE 387
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 31/164 (18%)
Query: 326 LIIAGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQATLK 385
L+ AGLDTT + + L D +++ + + + +
Sbjct: 248 LLSAGLDTTVNGIAAAVYCLARFPDEFARLRADPSLA------------------RNAFE 289
Query: 386 EAMRLYPAVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCKFQPERFL 445
EA+R V + + G + ++L+ + RDPR W++P ++ R
Sbjct: 290 EAVRFESPVQTFF-RTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT 348
Query: 446 TKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ 489
+ H + FGSG MC G A + +A+L +
Sbjct: 349 SGH------------VGFGSGVHMCVGQLVARLEGEVVLAALAR 380
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 70/171 (40%), Gaps = 37/171 (21%)
Query: 323 CLGLII-AGLDTTTVTLTWVISLLLNHRDILDKVQNELDIQVGTKRQVNESDLKNLVYLQ 381
LG+ I AG +TTT + LLL+ ++ +++ + D+ +
Sbjct: 242 TLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPDL------------------MP 283
Query: 382 ATLKEAMRLYP---AVPLLIPHEAIEECTVNGYHVPARTQLLINVWKLQRDPRVWEEPCK 438
A + E +R+ ++PL + E IE ++G VPA ++ + DP +++P +
Sbjct: 284 AAVDELLRVLSVADSIPLRVAAEDIE---LSGRTVPADDGVIALLAGANHDPEQFDDPER 340
Query: 439 FQPERFLTKHKDIDVRGQHLELLPFGSGRRMCPGVSFALQVMQFTIASLLQ 489
R H + FG G C G A ++ + +LL+
Sbjct: 341 VDFHRTDNHH------------VAFGYGVHQCVGQHLARLELEVALETLLR 379
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 428 RDPRVWEEPCKFQPERFLTKHKDIDVR------GQHLELLPFGSGRRMCPGVSFALQVMQ 481
RDP++++ +F PERF+ + + +R G E G+ + C G F + V +
Sbjct: 398 RDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGN--KQCAGKDFVVLVAR 455
Query: 482 FTIASLLQGFD 492
+ + + +D
Sbjct: 456 LFVIEIFRRYD 466
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 428 RDPRVWEEPCKFQPERFLTKHKDIDVR------GQHLELLPFGSGRRMCPGVSFALQVMQ 481
RDP++++ +F PERF+ + + +R G E G+ + C G F + V +
Sbjct: 398 RDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGN--KQCAGKDFVVLVAR 455
Query: 482 FTIASLLQGFD 492
+ + + +D
Sbjct: 456 LFVIEIFRRYD 466
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,250,522
Number of Sequences: 62578
Number of extensions: 631743
Number of successful extensions: 1835
Number of sequences better than 100.0: 166
Number of HSP's better than 100.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 1481
Number of HSP's gapped (non-prelim): 187
length of query: 531
length of database: 14,973,337
effective HSP length: 103
effective length of query: 428
effective length of database: 8,527,803
effective search space: 3649899684
effective search space used: 3649899684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)