BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046045
(119 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q76EJ0|YABDL_ORYSJ Protein DROOPING LEAF OS=Oryza sativa subsp. japonica GN=DL PE=1
SV=1
Length = 194
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 91/122 (74%), Gaps = 6/122 (4%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNLSFLSTRPP---PQGPSQMSLRFQEKQSFCNDFKLGNAS 57
VG+PCKRL+DTVTVKCGHC+NLSFLS RPP P P+ L Q C D +
Sbjct: 24 VGVPCKRLMDTVTVKCGHCNNLSFLSPRPPMVQPLSPTDHPL--GPFQGPCTDCRRNQPL 81
Query: 58 SSSSSTSSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAA 117
S TS+E SP+APFVVKPPEKKHRLPSAYNRFM+EEIQRIKAA P+IPHREAFS AA
Sbjct: 82 PLVSPTSNE-GSPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAA 140
Query: 118 KN 119
KN
Sbjct: 141 KN 142
>sp|Q8L925|CRC_ARATH Protein CRABS CLAW OS=Arabidopsis thaliana GN=CRC PE=1 SV=2
Length = 181
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/120 (70%), Positives = 97/120 (80%), Gaps = 3/120 (2%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPQGPSQMSLRFQEKQSFCNDFKLGNASSSS 60
VGIP KR+LDTVTVKCGHC NLSFL+T PP QG +SL Q + +D+K G++SSSS
Sbjct: 35 VGIPLKRMLDTVTVKCGHCGNLSFLTTTPPLQG--HVSLTLQMQSFGGSDYKKGSSSSSS 92
Query: 61 SSTSSEPLSPKAP-FVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKN 119
SSTSS+ +P FVVKPPEKK RLPSAYNRFM++EIQRIK+ANPEIPHREAFS AAKN
Sbjct: 93 SSTSSDQPPSPSPPFVVKPPEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKN 152
>sp|Q8GW46|YAB5_ARATH Axial regulator YABBY 5 OS=Arabidopsis thaliana GN=YAB5 PE=2 SV=1
Length = 164
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 77/125 (61%), Gaps = 13/125 (10%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPQGPSQMSLRFQEKQSFCNDFKLGNASSSS 60
V +PC L D VTV+CGHC+NL ++ Q S+ + + ++ + SSS
Sbjct: 25 VNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQ-------ATNYAVPEYGSSS 77
Query: 61 SSTSSEP--LSPKAP----FVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFS 114
S + P +S + V +PPEK+ R+PSAYN+F+KEEIQRIKA NP+I HREAFS
Sbjct: 78 RSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFS 137
Query: 115 TAAKN 119
TAAKN
Sbjct: 138 TAAKN 142
>sp|Q9XFB0|YAB2_ARATH Putative axial regulator YABBY 2 OS=Arabidopsis thaliana GN=YAB2
PE=2 SV=1
Length = 184
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 77/128 (60%), Gaps = 11/128 (8%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNL-------SFLSTRPPPQGPSQMSLRFQEKQSFCNDFKL 53
V +P L VTV+CGHC+NL S T PP R Q S K
Sbjct: 24 VSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHR-QHTTSLVTR-KD 81
Query: 54 GNASSSSSSTSSEPLSPKAPFV--VKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHRE 111
+SS S++ SE + +AP + ++PPEK+ R+PSAYNRF+KEEIQRIKA NPEI HRE
Sbjct: 82 CASSSRSTNNLSENIDREAPRMPPIRPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHRE 141
Query: 112 AFSTAAKN 119
AFSTAAKN
Sbjct: 142 AFSTAAKN 149
>sp|Q7XIM7|YAB1_ORYSJ Protein YABBY 1 OS=Oryza sativa subsp. japonica GN=YAB1 PE=2 SV=1
Length = 169
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 74/123 (60%), Gaps = 4/123 (3%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPQGPSQMSLRFQEKQSFCNDFKLGNASSSS 60
V +P + VTV+CGHC+ + + P Q + + Q + N+F + +S +
Sbjct: 24 VNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQDHQVQNRGFQGNNFGSYDIASRN 83
Query: 61 SSTSSE----PLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTA 116
TS+ P S + ++PPEK+ R+PSAYNRF+KEEIQRIK +NPEI HREAFS A
Sbjct: 84 QRTSTAMYPMPTSQQQVSPIRPPEKRQRVPSAYNRFIKEEIQRIKTSNPEISHREAFSAA 143
Query: 117 AKN 119
AKN
Sbjct: 144 AKN 146
>sp|Q10FZ7|YAB2_ORYSJ Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1
Length = 186
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 16/130 (12%)
Query: 1 VGIPCKRLLDTVTVKCGHCS-----NLSFLSTRPPPQGPSQMSLR-----FQEKQS-FCN 49
V +P +L+ VTV+CGHC+ NL L P + Q +L+ F+E S + +
Sbjct: 26 VSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHLQDNLKMHNMSFRENYSEYGS 85
Query: 50 DFKLGNASSSSSSTSSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPH 109
+ G S +E + V+PPEK+ R+PSAYNRF+KEEI+RIKA NP+I H
Sbjct: 86 SSRYGRVPMMFSKNDTEHM-----LHVRPPEKRQRVPSAYNRFIKEEIRRIKANNPDISH 140
Query: 110 REAFSTAAKN 119
REAFSTAAKN
Sbjct: 141 REAFSTAAKN 150
>sp|Q0JBF0|YAB5_ORYSJ Protein YABBY 5 OS=Oryza sativa subsp. japonica GN=YAB5 PE=2 SV=1
Length = 266
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 79/163 (48%), Gaps = 44/163 (26%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNLSFLSTR-----------------------PPPQGPSQM 37
VG+PC L TVTV+CGHC+NL ++ R P G
Sbjct: 45 VGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDE 104
Query: 38 SLRFQEKQSFCNDFKLGN--------------------ASSSSSSTSSEPLSPK-APFVV 76
FQ S + N AS+++ +T EP PK AP
Sbjct: 105 VPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSAN 164
Query: 77 KPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKN 119
+ EK+ R+PSAYNRF+K+EIQRIKA+NP+I HREAFS AAKN
Sbjct: 165 RTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKN 207
>sp|Q01JG2|YAB5_ORYSI Protein YABBY 5 OS=Oryza sativa subsp. indica GN=YAB5 PE=2 SV=2
Length = 266
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 79/163 (48%), Gaps = 44/163 (26%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNLSFLSTR-----------------------PPPQGPSQM 37
VG+PC L TVTV+CGHC+NL ++ R P G
Sbjct: 45 VGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDE 104
Query: 38 SLRFQEKQSFCNDFKLGN--------------------ASSSSSSTSSEPLSPK-APFVV 76
FQ S + N AS+++ +T EP PK AP
Sbjct: 105 VPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSAN 164
Query: 77 KPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKN 119
+ EK+ R+PSAYNRF+K+EIQRIKA+NP+I HREAFS AAKN
Sbjct: 165 RTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKN 207
>sp|Q2QM17|YAB6_ORYSJ Protein YABBY 6 OS=Oryza sativa subsp. japonica GN=YAB6 PE=2 SV=1
Length = 207
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 23/142 (16%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNL------SFLSTRPPPQGPSQMSLR-------FQEKQSF 47
V +P +L+ VTV+CGHC+NL + + P Q L+ F+++ +
Sbjct: 25 VSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQDHHHHHLQESGLSGCFRDQSGY 84
Query: 48 ----------CNDFKLGNASSSSSSTSSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEI 97
+ +L A+++ S S + + +PPEK+ R+PSAYNRF+KEEI
Sbjct: 85 PEFGFSAASSSSKLRLPPAAAAMVSYSQQNQQLEQALHARPPEKRQRVPSAYNRFIKEEI 144
Query: 98 QRIKAANPEIPHREAFSTAAKN 119
+RIKA NP+I HREAFSTAAKN
Sbjct: 145 RRIKANNPDISHREAFSTAAKN 166
>sp|O22152|YAB1_ARATH Axial regulator YABBY 1 OS=Arabidopsis thaliana GN=YAB1 PE=1 SV=1
Length = 229
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 75/140 (53%), Gaps = 21/140 (15%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNLSFLSTRP---PPQGPSQMSL---RFQEKQSFCNDFKLG 54
V +P L TVTV+CG C+NL ++ R P Q+ L + Q + +
Sbjct: 39 VNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLGPHSYFNPQDILEELRDA 98
Query: 55 NASSSSSSTSSEPLS---------------PKAPFVVKPPEKKHRLPSAYNRFMKEEIQR 99
++ + + P PKAP V +PPEK+ R+PSAYNRF+KEEIQR
Sbjct: 99 PSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPPVNRPPEKRQRVPSAYNRFIKEEIQR 158
Query: 100 IKAANPEIPHREAFSTAAKN 119
IKA NP+I HREAFS AAKN
Sbjct: 159 IKAGNPDISHREAFSAAAKN 178
>sp|Q6H668|YAB4_ORYSJ Protein YABBY 4 OS=Oryza sativa subsp. japonica GN=YAB4 PE=2 SV=1
Length = 256
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 81/163 (49%), Gaps = 44/163 (26%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPQ-------------GPSQMS----LRFQE 43
VG+PC L TVTV+CGHC+NL ++ R GPS +S +
Sbjct: 39 VGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLD 98
Query: 44 KQSFCNDFKLGNASSSSS-------------------------STSSEPLSPK-APFVV- 76
+ +F L ++S+S EP PK AP
Sbjct: 99 EVAFQTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASAN 158
Query: 77 KPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKN 119
+PPEK+ R+PSAYNRF+K+EIQRIKA NP+I HREAFS AAKN
Sbjct: 159 RPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN 201
>sp|A2X7Q3|YAB4_ORYSI Protein YABBY 4 OS=Oryza sativa subsp. indica GN=YAB4 PE=2 SV=1
Length = 256
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 81/163 (49%), Gaps = 44/163 (26%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPQ-------------GPSQMS----LRFQE 43
VG+PC L TVTV+CGHC+NL ++ R GPS +S +
Sbjct: 39 VGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLD 98
Query: 44 KQSFCNDFKLGNASSSSS-------------------------STSSEPLSPK-APFVV- 76
+ +F L ++S+S EP PK AP
Sbjct: 99 EVAFQTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASAN 158
Query: 77 KPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKN 119
+PPEK+ R+PSAYNRF+K+EIQRIKA NP+I HREAFS AAKN
Sbjct: 159 RPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN 201
>sp|Q9XFB1|YAB3_ARATH Axial regulator YABBY 3 OS=Arabidopsis thaliana GN=YAB3 PE=1 SV=1
Length = 240
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 75/152 (49%), Gaps = 33/152 (21%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNL--------------------SFLSTRPPPQGPSQMSLR 40
V +P L TVTV+CGHCSNL SFL PPP P+ +
Sbjct: 39 VSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLEEM 98
Query: 41 FQEKQSFCNDFKLGNASSSSSSTSSEPLSPKAPFVVK-------------PPEKKHRLPS 87
Q+ + + + +S+ ++ + V PPEK+ R+PS
Sbjct: 99 RSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPS 158
Query: 88 AYNRFMKEEIQRIKAANPEIPHREAFSTAAKN 119
AYNRF+KEEIQRIKA NP+I HREAFS AAKN
Sbjct: 159 AYNRFIKEEIQRIKAGNPDISHREAFSAAAKN 190
>sp|Q9LDT3|YAB4_ARATH Axial regulator YABBY 4 OS=Arabidopsis thaliana GN=YAB4 PE=1 SV=2
Length = 231
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 19/138 (13%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNL--------SFL-------STRPPPQGPSQMSLR--FQE 43
V +P L VTV+CGHC++L SF+ + G +++ +E
Sbjct: 35 VSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLHLLASLSHLDETGKEEVAATDGVEE 94
Query: 44 KQSFCNDFKLGNASS--SSSSTSSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIK 101
+ N K + ++ SSS E +S V KPPEK+ R PSAYN F+KEEI+R+K
Sbjct: 95 EAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLK 154
Query: 102 AANPEIPHREAFSTAAKN 119
A NP + H+EAFS AAKN
Sbjct: 155 AQNPSMAHKEAFSLAAKN 172
>sp|Q8L556|YAB3_ORYSJ Protein YABBY 3 OS=Oryza sativa subsp. japonica GN=YAB3 PE=2 SV=1
Length = 313
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 57 SSSSSSTSSEPLSPKAPFVV--KPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFS 114
+S + + EP SP+ V +PPEK+ R+PSAYNRF+K+EIQRIKA NP+I HREAFS
Sbjct: 193 TSQGKAAAKEP-SPRTNTAVINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFS 251
Query: 115 TAAKN 119
AAKN
Sbjct: 252 AAAKN 256
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 9 LDTVTVKCGHCSNLSFLSTR 28
+TVTV+CGHCS+L ++ R
Sbjct: 82 FETVTVRCGHCSSLLTVNMR 101
>sp|A2PZN8|YAB7_ORYSJ Protein YABBY 7 OS=Oryza sativa subsp. japonica GN=YAB7 PE=2 SV=1
Length = 169
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 1 VGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPQGPSQMSLRFQEKQSF-----CNDFKLGN 55
V +PC +L V V+CGHCS + PP + + L QE + +D G+
Sbjct: 30 VSVPCSSVLRVVAVQCGHCSGILSAVNLPPSPVSASIELTPQELDAGPPPGEYSDESSGD 89
Query: 56 ASSSSSSTSSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFST 115
+ P A KPP +K R PSAYN F+KEEI+RIK+ P I H++AFST
Sbjct: 90 DREGRDAEDDAPAPAAAAVANKPPGRKQRTPSAYNCFVKEEIKRIKSMEPNITHKQAFST 149
Query: 116 AAKN 119
AAKN
Sbjct: 150 AAKN 153
>sp|Q8NF50|DOCK8_HUMAN Dedicator of cytokinesis protein 8 OS=Homo sapiens GN=DOCK8 PE=1 SV=3
Length = 2099
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 44 KQSFCNDFKLGNASSSSSSTSSEPLSPKAPFVVKPPEKKHRLPSAYNR-FMKEEIQRIKA 102
K+ F F++G S + K P + K PE HRL + Y + F E ++ IK
Sbjct: 1788 KRMFGTYFRVGFFGSKFGDLDEQEFVYKEPAITKLPEISHRLEAFYGQCFGAEFVEVIKD 1847
Query: 103 ANP 105
+ P
Sbjct: 1848 STP 1850
>sp|Q8C147|DOCK8_MOUSE Dedicator of cytokinesis protein 8 OS=Mus musculus GN=Dock8 PE=1 SV=4
Length = 2100
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 44 KQSFCNDFKLGNASSSSSSTSSEPLSPKAPFVVKPPEKKHRLPSAYNR-FMKEEIQRIKA 102
K+ F F++G S + K P + K PE HRL Y + F E ++ IK
Sbjct: 1789 KRMFGTYFRVGFYGSRFGDLDEQEFVYKEPAITKLPEISHRLEGFYGQCFGAEFVEVIKD 1848
Query: 103 ANP 105
+ P
Sbjct: 1849 STP 1851
>sp|E1BDF2|SHRPN_BOVIN Sharpin OS=Bos taurus GN=SHARPIN PE=3 SV=1
Length = 409
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 21/100 (21%)
Query: 11 TVTVKCGHCSNLSFLSTRPPPQGPSQMSLRF---QEKQSFCNDFKLGNASSSSSSTS--- 64
TV C H +PPP GP +SL F QE Q + + + S S
Sbjct: 79 TVRGPCQH-------ELQPPPGGPGTLSLHFANPQEAQRWAALVRDATVEGQNGSDSLPP 131
Query: 65 -----SEPLSPKAPFVV---KPPEKKHRLPSAYNRFMKEE 96
+ P+SP +P V K P+ K LP + M++E
Sbjct: 132 ALGPETRPVSPPSPLEVPTPKAPKPKVDLPWSPGDLMEKE 171
>sp|O18917|B3A3_RABIT Anion exchange protein 3 OS=Oryctolagus cuniculus GN=SLC4A3 PE=2
SV=1
Length = 1233
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 12/86 (13%)
Query: 20 SNLSFLSTRPPPQGPSQMSLRFQEKQSFCNDFKLGNASSSSSSTSSEPLSPKAPFVVKPP 79
S L ++PP P + S F E+ DF S + PLS + P PP
Sbjct: 45 SRFGDLISKPPAWDPEKPSRSFSER-----DFAF---HRHISHHTHHPLSARLP----PP 92
Query: 80 EKKHRLPSAYNRFMKEEIQRIKAANP 105
K RLP + R + + ++ K + P
Sbjct: 93 HKLRRLPPTFARHTRRKRKKEKTSAP 118
>sp|Q67WR5|FCL2_ORYSJ Putative GDP-L-fucose synthase 2 OS=Oryza sativa subsp. japonica
GN=Os06g0652300 PE=3 SV=1
Length = 347
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 23 SFLSTRPPPQGPSQMSLRFQEKQSFCNDFKLGNASSSSSSTSSEPLSPKAPFVVKPPEKK 82
S L T PP +G ++ C + + ++ + P+ PF PPE
Sbjct: 154 SALLTGPPAEGSEWYAIPKIAGIKMCQAVRAEYGLDAIAAAPNNLYGPRHPF---PPEHS 210
Query: 83 HRLPSAYNRFMKEEIQ 98
H +P+ RF + +++
Sbjct: 211 HVIPALIRRFHRAKLE 226
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,544,806
Number of Sequences: 539616
Number of extensions: 1596648
Number of successful extensions: 6050
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 5980
Number of HSP's gapped (non-prelim): 88
length of query: 119
length of database: 191,569,459
effective HSP length: 86
effective length of query: 33
effective length of database: 145,162,483
effective search space: 4790361939
effective search space used: 4790361939
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)