BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046048
(414 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5E9Y6|PRUNE_BOVIN Protein prune homolog OS=Bos taurus GN=PRUNE PE=2 SV=1
Length = 453
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 116/231 (50%), Gaps = 28/231 (12%)
Query: 201 GRLLHVVIGQDVCDVGSLASTFMYAFYLNLVQE-NELFCTVPVINMKRADLNTRAELKWL 259
R +HVV+G + CD+ S+ S AFYL E E+F VPV+N+KR++L R + +
Sbjct: 15 SRPIHVVLGNEACDLDSMVSALALAFYLAKTTEAEEVF--VPVLNIKRSELPLRGDNVFF 72
Query: 260 LGSCQIDLSSLIFVDEIDLSYYDLFGSLKLVLINGHKLPTRQEALKDAVVEIFNCR---- 315
L I S LIF DEIDL G L L+L++ H LP AL++AV E+ + R
Sbjct: 73 LQKIHIPESVLIFRDEIDLHALHQAGQLTLILVDHHVLPKSDAALEEAVAEVLDHRPIDQ 132
Query: 316 KDC-----------SCCTVVAENFALTSPQILAGQGFSRILLAGILLDTGN--LTNTRCT 362
+ C SC T+VAE +P+IL Q + +L ILLD N L + T
Sbjct: 133 RHCPPCHVSVELVGSCATLVAERILQGAPEILDRQT-AALLHGTILLDCVNMDLKIGKAT 191
Query: 363 SKDKY----MATLLINGAGRFGCNGLYQILRYLMYDVSDLKVVDILRKDFK 409
KD + + L + R N ++ L+ +DVS L +LRKD K
Sbjct: 192 LKDSHYVEKLEALFPDLPSR---NDIFDSLQKAKFDVSGLTTEQMLRKDQK 239
>sp|Q86TP1|PRUNE_HUMAN Protein prune homolog OS=Homo sapiens GN=PRUNE PE=1 SV=2
Length = 453
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 113/228 (49%), Gaps = 22/228 (9%)
Query: 201 GRLLHVVIGQDVCDVGSLASTFMYAFYLNLVQE-NELFCTVPVINMKRADLNTRAELKWL 259
R LHVV+G + CD+ S S AFYL E E+F VPV+N+KR++L R ++ +
Sbjct: 15 SRPLHVVLGNEACDLDSTVSALALAFYLAKTTEAEEVF--VPVLNIKRSELPLRGDIVFF 72
Query: 260 LGSCQIDLSSLIFVDEIDLSYYDLFGSLKLVLINGHKLPTRQEALKDAVVEIFNCR---- 315
L I S LIF DEIDL G L L+L++ H L AL++AV E+ + R
Sbjct: 73 LQKVHIPESILIFRDEIDLHALYQAGQLTLILVDHHILSKSDTALEEAVAEVLDHRPIEP 132
Query: 316 KDC-----------SCCTVVAENFALTSPQILAGQGFSRILLAGILLDTGN--LTNTRCT 362
K C SC T+V E +P+IL Q + +L I+LD N L + T
Sbjct: 133 KHCPPCHVSVELVGSCATLVTERILQGAPEILDRQT-AALLHGTIILDCVNMDLKIGKAT 191
Query: 363 SKD-KYMATLLINGAGRFGCNGLYQILRYLMYDVSDLKVVDILRKDFK 409
KD KY+ L N ++ L+ +DVS L +LRKD K
Sbjct: 192 PKDSKYVEKLEALFPDLPKRNDIFDSLQKAKFDVSGLTTEQMLRKDQK 239
>sp|Q8BIW1|PRUNE_MOUSE Protein prune homolog OS=Mus musculus GN=Prune PE=2 SV=1
Length = 454
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 115/228 (50%), Gaps = 22/228 (9%)
Query: 201 GRLLHVVIGQDVCDVGSLASTFMYAFYLNLVQENE-LFCTVPVINMKRADLNTRAELKWL 259
R LHVV+G + CD+ S+ S AFYL E E +F +PV+N+KR++L R + +
Sbjct: 15 SRPLHVVLGNEACDLDSMVSALALAFYLTKTSEAEDIF--IPVLNIKRSELPLRGDNVFF 72
Query: 260 LGSCQIDLSSLIFVDEIDLSYYDLFGSLKLVLINGHKLPTRQEALKDAVVEIFNCR---- 315
L +I +LIF DEIDL G L L+L++ H LP AL++AV E+ + R
Sbjct: 73 LQEVKIPEPALIFRDEIDLLALHQAGQLTLILVDHHILPKSDAALEEAVAEVLDHRPIEQ 132
Query: 316 KDC-----------SCCTVVAENFALTSPQILAGQGFSRILLAGILLDTGNL-TNT-RCT 362
K C SC T+V E +P+ L Q + +L I+LD N+ TN + T
Sbjct: 133 KYCPPCHVSVELVGSCATLVTERILQGAPETLDRQT-AALLHGTIILDCVNMDTNIGKAT 191
Query: 363 SKD-KYMATLLINGAGRFGCNGLYQILRYLMYDVSDLKVVDILRKDFK 409
KD KY+ L ++ L+ +DVS L +LRKD K
Sbjct: 192 PKDSKYVEELEALFPDLPKRKDIFDSLQKAKFDVSGLTTEQMLRKDQK 239
>sp|Q6AYG3|PRUNE_RAT Protein prune homolog OS=Rattus norvegicus GN=Prune PE=2 SV=1
Length = 454
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 115/228 (50%), Gaps = 22/228 (9%)
Query: 201 GRLLHVVIGQDVCDVGSLASTFMYAFYLNLVQENE-LFCTVPVINMKRADLNTRAELKWL 259
R LHVV+G + CD+ S+ S AFYL E E +F +PV+N+KR++L R + +
Sbjct: 15 SRPLHVVLGNEACDLDSMVSALALAFYLTKTSEAEDIF--IPVLNIKRSELPLRGDNVFF 72
Query: 260 LGSCQIDLSSLIFVDEIDLSYYDLFGSLKLVLINGHKLPTRQEALKDAVVEIFNCR---- 315
L +I S+LIF DEIDL G L L+L++ H LP AL++AV E+ + R
Sbjct: 73 LQEVKIAESALIFRDEIDLLALHQAGQLTLILVDHHMLPKSDAALEEAVAEVLDHRPIEQ 132
Query: 316 KDC-----------SCCTVVAENFALTSPQILAGQGFSRILLAGILLDTGNLTNT--RCT 362
K C SC T+VAE +P+ L Q + +L I+LD N+ + T
Sbjct: 133 KYCPPCHVSVELVGSCATLVAERILQGAPETLDRQT-AALLHGTIILDCVNMDAKIGKAT 191
Query: 363 SKD-KYMATLLINGAGRFGCNGLYQILRYLMYDVSDLKVVDILRKDFK 409
KD +Y+ L ++ L+ +DVS L +LRKD K
Sbjct: 192 LKDNEYVEKLEALFPDLPKRKDIFDSLQKAKFDVSGLTTEQMLRKDQK 239
>sp|Q8WUY3|PRUN2_HUMAN Protein prune homolog 2 OS=Homo sapiens GN=PRUNE2 PE=1 SV=3
Length = 3088
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 204 LHVVIGQDVCDVGSLASTFMYAFYLNLVQENELFCTVPVINMKRADLNTRAELKWLLGSC 263
+HVVIG CD+ SL STF YA++L+ V + C +PV+N+ R + N E +++L
Sbjct: 21 VHVVIGPKSCDLDSLISTFTYAYFLDKVSPPGVLC-LPVLNIPRTEFNYFTETRFILEEL 79
Query: 264 QIDLSSLIFVDEIDLSYYDLFGSLKLVLINGHKLPTRQEALKDAVVEIFNCRKDC----- 318
I S IF DEI+L + G L + L+ L + + L+ AVV++ N +
Sbjct: 80 NISESFHIFRDEINLHQLNDEGKLSITLVGSSVLASEDKTLESAVVKVINPVEQSDANVE 139
Query: 319 ---SCCTVVAENFALTSPQILAGQGFSRILLAGILLDTGNLTNTRCTSKDKYMATLLING 375
S ++V + +P+++ Q + L IL + + + + K + + ++L
Sbjct: 140 FRESSSSLVLKEILQEAPELITEQ-LAHRLRGSILFKWMTMESEKISEKQEEILSILEEK 198
Query: 376 AGRFGC-NGLYQILRYLMYDVSDLKVVDILRKDFKK 410
+ +L+ + L + + KD K+
Sbjct: 199 FPNLPPREDIINVLQETQFSAQGLSIEQTMLKDLKE 234
>sp|Q52KR3|PRUN2_MOUSE Protein prune homolog 2 OS=Mus musculus GN=Prune2 PE=2 SV=2
Length = 3084
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 184 LNSYLKARKDEVSAGVPGRLLHVVIGQDVCDVGSLASTFMYAFYLNLVQENELFCTVPVI 243
+ +L+ K ++ +H VIG CD+ SL S F YA++L+ V + C +PV+
Sbjct: 1 MEEFLQRAKSKLDRSKQLEQVHAVIGPKSCDLDSLISAFTYAYFLDKVSPPGVLC-LPVL 59
Query: 244 NMKRADLNTRAELKWLLGSCQIDLSSLIFVDEIDLSYYDLFGSLKLVLINGHKLPTRQEA 303
N+ R + N E +++L I S IF DEI+L + G L + L+ H L +
Sbjct: 60 NIPRTEFNYFTETRFILEELNIPESFHIFRDEINLHQLNDEGKLSITLVGSHVLGSEDRT 119
Query: 304 LKDAVVEIFNCRKDC--------SCCTVVAENFALTSPQILAGQGFSRILLAGILL 351
L+ AVV + N + + ++V + +P+++ Q + +L IL
Sbjct: 120 LESAVVRVINPGEQSDGELGFPETSSSLVLKELLREAPELIT-QQLAHLLRGSILF 174
>sp|O14094|PPX1_SCHPO Putative exopolyphosphatase OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC2F3.11 PE=3 SV=1
Length = 384
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 29/231 (12%)
Query: 207 VIGQDVCDVGSLASTFMYAFYLNLVQENELFCTVPVINMKRADLNTRAELKWLLGSCQID 266
V G + D+ S AS+ +YA+ L Q + VP N+ R +L R EL +LL I
Sbjct: 33 VSGNESADLDSCASSIVYAYCLQRKQLGRI--VVPFFNIPRKELRLRPELSYLLNLASIS 90
Query: 267 LSSLIFVDEIDLSYYDLFGSLKLVLINGHKLPTRQ-EALKDAVVEIFNCRKD-------- 317
++F+D+I +F + + L++ + L + E ++ I + KD
Sbjct: 91 SDDIVFLDDIVKLPKRIFSN-PIYLVDHNSLDRKDLENFNGSIAGIIDHHKDEGGSLHAD 149
Query: 318 ------C-SCCTVVAENF---------ALTSPQILAGQGFSRILLAGILLDTGNLTNTRC 361
C SCCT+V F + S + + L IL+DTGNL N +
Sbjct: 150 PRIIEECGSCCTLVCRYFMPVIRSLYDSKVSELHQTATNLAVLALGPILIDTGNLKNEKT 209
Query: 362 TSKDKYMATLLINGAGR-FGCNGLYQILRYLMYDVSDLKVVDILRKDFKKW 411
T D + L + + + + + L+ D+LR+D K++
Sbjct: 210 TDTDVKIVNDLCSFVPKDWVRDEFFDTLKEKKKSCKGFSFDDLLRRDLKQY 260
>sp|P38698|PPX1_YEAST Exopolyphosphatase OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=PPX1 PE=1 SV=1
Length = 397
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 98/244 (40%), Gaps = 36/244 (14%)
Query: 203 LLHVVIGQDVCDVGSLASTFMYAFYLNLVQENELF-------CTVPVINMKRADLNTRAE 255
+L + +G + D+ S+AS Y++ + E VP+I++ R DL+ R +
Sbjct: 28 VLTICVGNESADMDSIASAITYSYCQYIYNEGTYSEEKKKGSFIVPIIDIPREDLSLRRD 87
Query: 256 LKWLLGSCQIDLSSLIFVDEIDLSYYDLFGSLKL--VLINGHKLPTRQEALKDAVVEIFN 313
+ ++L +I L F++++ ++ +L L++ + P + D VV I +
Sbjct: 88 VMYVLEKLKIKEEELFFIEDLKSLKQNVSQGTELNSYLVDNNDTPKNLKNYIDNVVGIID 147
Query: 314 CRKDCS--------------CCTVVAENFALTSPQ--ILAGQGFSRILLAGILLDTGNLT 357
D C+ + N+ Q + +L+ IL+DT N+
Sbjct: 148 HHFDLQKHLDAEPRIVKVSGSCSSLVFNYWYEKLQGDREVVMNIAPLLMGAILIDTSNM- 206
Query: 358 NTRCTSKDKYM----ATLLINGAGRFGCNGL------YQILRYLMYDVSDLKVVDILRKD 407
+ DK +L GL Y+ ++ D+ V DIL+KD
Sbjct: 207 RRKVEESDKLAIERCQAVLSGAVNEVSAQGLEDSSEFYKEIKSRKNDIKGFSVSDILKKD 266
Query: 408 FKKW 411
+K++
Sbjct: 267 YKQF 270
>sp|Q921F4|HNRLL_MOUSE Heterogeneous nuclear ribonucleoprotein L-like OS=Mus musculus
GN=Hnrpll PE=1 SV=3
Length = 591
Score = 35.4 bits (80), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 129 YGTSDLMLPAFSKSYSTKRTKPNLSKIPLPQSAASFYNGFSPQMEIV 175
YG+ +LP S+ R P L PLPQ+++S+ +G SP +V
Sbjct: 340 YGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGSPSGSVV 386
>sp|C5DJ44|AIM21_LACTC Altered inheritance of mitochondria protein 21 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=AIM21 PE=3 SV=1
Length = 650
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 55 GKTRHKTLDLDV--TEKPLDTTFEDSVSDINLEP 86
GK+ H DL+ TE+P+D ED +S+INLEP
Sbjct: 106 GKSWHSAQDLNKSHTEEPIDDPNEDKMSEINLEP 139
>sp|Q8WVV9|HNRLL_HUMAN Heterogeneous nuclear ribonucleoprotein L-like OS=Homo sapiens
GN=HNRPLL PE=1 SV=1
Length = 542
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 129 YGTSDLMLPAFSKSYSTKRTKPNLSKIPLPQSAASFYNGFSPQMEIV 175
YG+ +LP S+ R P L PLPQ+++S+ +G +P +V
Sbjct: 291 YGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGNPSGSVV 337
>sp|Q2NJM5|GCP_AYWBP Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Aster yellows witches'-broom phytoplasma (strain
AYWB) GN=gcp PE=3 SV=1
Length = 274
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 22/135 (16%)
Query: 69 KPLDTTFEDSVSDINLEPFGPSSPGIFSKIAKRSSFSFPSGDLSNSIKEPIPRNLKALEQ 128
KPL TT +D+V ++ + KIAK + +P G L + + + +
Sbjct: 97 KPLGTTIDDAVGEV------------YDKIAKNLNLPYPGGPLIDQLAQQGKDTYHLVRP 144
Query: 129 YGTSDLMLPAFSKSYSTKRT---KPNLSKIPLPQSAASFYNGFSPQMEIVES-CESINRL 184
Y +D + +FS ST K NL I +P ASF Q ++ CE R
Sbjct: 145 YLKNDNLNFSFSGLKSTLVNLVMKQNLKDINIPDLCASF------QTSVINVLCEKTKRA 198
Query: 185 NSYLKARKDEVSAGV 199
+ ++ V GV
Sbjct: 199 LTKYHVKQLIVVGGV 213
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,279,438
Number of Sequences: 539616
Number of extensions: 6546702
Number of successful extensions: 14231
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 14205
Number of HSP's gapped (non-prelim): 20
length of query: 414
length of database: 191,569,459
effective HSP length: 120
effective length of query: 294
effective length of database: 126,815,539
effective search space: 37283768466
effective search space used: 37283768466
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)