BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046049
NLLTESEIITALLGNYEGDLSLHLIQLFREHFDKAKISLPFWQLLDSEENVNRPDISEIL
EDINYFVQESEEAIDAFFINIMQQQNSESTTCKARLVGLHSKIIDIRNRMEQLPPSDNDF
DINERRDKLIHLLIEGQPRVDESEFERGREELFDLLIEGPPRLSVVAILDGIGFDMTAFA
ADAFNNNHVKFYFDCHAWVKNLSVSIAYDFGKILDDIIKSVMPPSRVSVIIGEDYQLKKS
ILRDYLTDKKYFIVLDDVFDD

High Scoring Gene Products

Symbol, full name Information P value
AT3G46730 protein from Arabidopsis thaliana 6.0e-05

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046049
        (261 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504956483 - symbol:AT3G46730 species:3702 "Ara...   126  6.0e-05   1


>TAIR|locus:504956483 [details] [associations]
            symbol:AT3G46730 species:3702 "Arabidopsis thaliana"
            [GO:0006952 "defense response" evidence=IEA;ISS] [GO:0043531 "ADP
            binding" evidence=IEA] InterPro:IPR000767 InterPro:IPR002182
            Pfam:PF00931 PRINTS:PR00364 GO:GO:0005524 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006952 GO:GO:0043531 EMBL:AL096859
            HOGENOM:HOG000237753 ProtClustDB:CLSN2684836 IPI:IPI00520859
            PIR:T12977 RefSeq:NP_190257.1 UniGene:At.65257
            ProteinModelPortal:Q9STE7 SMR:Q9STE7 PaxDb:Q9STE7 PRIDE:Q9STE7
            EnsemblPlants:AT3G46730.1 GeneID:823826 KEGG:ath:AT3G46730
            TAIR:At3g46730 eggNOG:NOG270317 InParanoid:Q9STE7 OMA:WHEVCAS
            PhylomeDB:Q9STE7 Genevestigator:Q9STE7 GermOnline:AT3G46730
            Uniprot:Q9STE7
        Length = 847

 Score = 126 (49.4 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 57/220 (25%), Positives = 94/220 (42%)

Query:    55 DISEILEDI--NYFVQESEEAIDAFFINIMQQ--QNSESTTCKARLVGLHSKIIDIRNRM 110
             DI+  +ED+   YF++  E ++    + +  +  +  ++      +  L  +I+DI  + 
Sbjct:    67 DIAYDIEDVLDTYFLKLEERSLRRGLLRLTNKIGKKRDAYNIVEDIRTLKRRILDITRKR 126

Query:   111 EQLPPSDNDFDINERRDKLIHLLIEGQPRVDESEFERGREE-----LFDLLIEGPPRLSV 165
             E       +    E    +    +   P VD+ E   G E+     L  LL +     S 
Sbjct:   127 ETFGIGSFNEPRGENITNVRVRQLRRAPPVDQEELVVGLEDDVKILLVKLLSDNEKDKSY 186

Query:   166 VAILDGIG-FDMTAFAADAFNNNHVKFYFDCHAWVKNLSVSIAYDFGKILDDIIKS--VM 222
             +  + G+G    TA A   +N+  VK  FDC AW     VS  Y    IL  II+S  ++
Sbjct:   187 IISIFGMGGLGKTALARKLYNSGDVKRRFDCRAWTY---VSQEYKTRDILIRIIRSLGIV 243

Query:   223 PPSRVSVI--IGEDYQLKKSILRDYLTDKKYFIVLDDVFD 260
                 +  I    ED +L+   L   L  K Y +V+DDV+D
Sbjct:   244 SAEEMEKIKMFEEDEELEV-YLYGLLEGKNYMVVVDDVWD 282


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.141   0.406    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      261       261   0.00090  114 3  11 22  0.45    33
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  185 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.42u 0.08s 24.50t   Elapsed:  00:00:01
  Total cpu time:  24.42u 0.08s 24.50t   Elapsed:  00:00:01
  Start:  Fri May 10 17:29:26 2013   End:  Fri May 10 17:29:27 2013

Back to top