Query 046050
Match_columns 779
No_of_seqs 612 out of 5025
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 08:14:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046050.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046050hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4.6E-63 1E-67 597.6 43.4 538 58-691 70-611 (968)
2 PLN00113 leucine-rich repeat r 100.0 4.4E-59 9.5E-64 563.0 43.1 518 81-691 68-588 (968)
3 KOG4194 Membrane glycoprotein 100.0 9.1E-41 2E-45 339.7 7.4 371 257-692 81-457 (873)
4 KOG0472 Leucine-rich repeat pr 100.0 7E-44 1.5E-48 347.2 -16.1 493 58-685 46-562 (565)
5 KOG0472 Leucine-rich repeat pr 100.0 2E-41 4.4E-46 330.1 -9.8 511 30-660 42-561 (565)
6 KOG4194 Membrane glycoprotein 100.0 1.7E-39 3.7E-44 330.5 3.0 372 207-667 80-456 (873)
7 KOG0618 Serine/threonine phosp 100.0 1.9E-37 4.1E-42 332.5 -2.2 483 35-660 23-510 (1081)
8 KOG0618 Serine/threonine phosp 100.0 4.7E-37 1E-41 329.5 -3.4 483 37-662 2-488 (1081)
9 KOG0444 Cytoskeletal regulator 100.0 9.5E-34 2.1E-38 290.4 -4.0 362 230-663 7-375 (1255)
10 KOG0444 Cytoskeletal regulator 100.0 5.8E-33 1.3E-37 284.7 -2.7 361 58-482 8-373 (1255)
11 KOG4237 Extracellular matrix p 99.9 1.1E-27 2.4E-32 234.2 -2.0 276 231-510 68-361 (498)
12 PLN03210 Resistant to P. syrin 99.9 1.1E-22 2.4E-27 246.0 26.4 338 249-660 553-903 (1153)
13 KOG4237 Extracellular matrix p 99.9 9.2E-26 2E-30 220.8 -5.4 385 83-505 68-498 (498)
14 PLN03210 Resistant to P. syrin 99.9 7.6E-22 1.6E-26 238.8 27.0 340 221-637 549-904 (1153)
15 PRK15387 E3 ubiquitin-protein 99.9 5.9E-22 1.3E-26 221.6 17.6 82 579-669 383-464 (788)
16 PRK15387 E3 ubiquitin-protein 99.9 7E-22 1.5E-26 221.0 18.0 267 255-649 202-468 (788)
17 PRK15370 E3 ubiquitin-protein 99.8 1.9E-19 4.1E-24 203.2 13.9 164 331-513 200-363 (754)
18 PRK15370 E3 ubiquitin-protein 99.8 2.1E-19 4.5E-24 202.9 13.9 247 330-663 178-428 (754)
19 cd00116 LRR_RI Leucine-rich re 99.7 1.7E-18 3.6E-23 182.6 3.2 61 602-662 250-319 (319)
20 cd00116 LRR_RI Leucine-rich re 99.7 4.8E-18 1E-22 179.1 2.2 204 38-267 3-234 (319)
21 KOG0617 Ras suppressor protein 99.7 4.3E-18 9.3E-23 148.1 -2.3 89 418-508 26-115 (264)
22 PLN03150 hypothetical protein; 99.6 4.9E-15 1.1E-19 167.4 12.2 119 579-697 419-538 (623)
23 KOG0617 Ras suppressor protein 99.6 6.3E-17 1.4E-21 140.9 -4.1 160 328-515 31-192 (264)
24 KOG0532 Leucine-rich repeat (L 99.3 1.5E-13 3.3E-18 141.9 -0.6 173 424-663 74-247 (722)
25 KOG0532 Leucine-rich repeat (L 99.3 1.9E-13 4.1E-18 141.3 -4.6 172 449-688 77-248 (722)
26 PLN03150 hypothetical protein; 99.2 2.7E-11 5.9E-16 137.2 10.5 92 577-668 441-533 (623)
27 COG4886 Leucine-rich repeat (L 99.2 1.6E-11 3.5E-16 133.2 7.8 179 425-669 116-296 (394)
28 KOG1259 Nischarin, modulator o 99.1 7.9E-12 1.7E-16 119.2 0.2 62 601-664 351-413 (490)
29 COG4886 Leucine-rich repeat (L 99.1 8.2E-11 1.8E-15 127.6 7.8 151 354-508 116-268 (394)
30 KOG3207 Beta-tubulin folding c 99.1 9.5E-12 2.1E-16 125.1 -0.8 108 182-291 198-313 (505)
31 KOG1909 Ran GTPase-activating 99.1 1.4E-11 3E-16 120.6 0.3 140 4-144 19-198 (382)
32 PF14580 LRR_9: Leucine-rich r 99.1 9.5E-11 2.1E-15 108.1 4.9 106 55-166 17-123 (175)
33 KOG3207 Beta-tubulin folding c 99.1 3.5E-11 7.6E-16 121.0 1.2 205 12-244 118-340 (505)
34 KOG1259 Nischarin, modulator o 99.1 4.8E-11 1E-15 113.9 1.7 132 447-644 284-416 (490)
35 PF14580 LRR_9: Leucine-rich r 99.0 1.2E-10 2.6E-15 107.4 2.9 130 29-165 15-149 (175)
36 KOG1909 Ran GTPase-activating 99.0 3.6E-11 7.9E-16 117.7 -0.8 196 278-484 91-311 (382)
37 PF13855 LRR_8: Leucine rich r 98.9 8E-10 1.7E-14 83.7 2.7 59 603-661 2-60 (61)
38 KOG0531 Protein phosphatase 1, 98.9 1.3E-10 2.9E-15 126.0 -2.4 246 328-667 70-322 (414)
39 KOG0531 Protein phosphatase 1, 98.9 2.7E-10 5.9E-15 123.5 -1.1 221 398-687 91-318 (414)
40 PF13855 LRR_8: Leucine rich r 98.9 1.6E-09 3.6E-14 82.0 3.4 61 578-638 1-61 (61)
41 KOG4658 Apoptotic ATPase [Sign 98.8 5.4E-09 1.2E-13 121.0 5.8 125 15-142 523-653 (889)
42 KOG2982 Uncharacterized conser 98.7 3.1E-09 6.7E-14 101.8 1.0 215 54-293 42-263 (418)
43 KOG4658 Apoptotic ATPase [Sign 98.7 1.9E-08 4.1E-13 116.5 6.4 128 30-163 520-649 (889)
44 KOG1859 Leucine-rich repeat pr 98.6 6.6E-10 1.4E-14 118.4 -6.9 149 12-168 106-291 (1096)
45 KOG2120 SCF ubiquitin ligase, 98.6 2.9E-09 6.2E-14 102.0 -3.3 222 36-264 139-373 (419)
46 KOG1859 Leucine-rich repeat pr 98.6 2.8E-09 6.1E-14 113.7 -4.6 57 449-508 166-222 (1096)
47 KOG4579 Leucine-rich repeat (L 98.5 9.2E-09 2E-13 87.1 -1.8 89 578-669 77-165 (177)
48 KOG2120 SCF ubiquitin ligase, 98.5 5.3E-09 1.2E-13 100.2 -4.8 178 206-388 186-373 (419)
49 COG5238 RNA1 Ran GTPase-activa 98.3 1.5E-07 3.2E-12 89.3 1.3 166 2-169 18-227 (388)
50 KOG2982 Uncharacterized conser 98.1 6.7E-07 1.5E-11 86.1 0.7 205 31-237 69-286 (418)
51 COG5238 RNA1 Ran GTPase-activa 98.0 2E-06 4.3E-11 81.8 1.4 162 349-510 87-287 (388)
52 PF12799 LRR_4: Leucine Rich r 98.0 5.8E-06 1.3E-10 57.0 3.4 36 603-639 2-37 (44)
53 PF12799 LRR_4: Leucine Rich r 98.0 7.5E-06 1.6E-10 56.5 3.2 36 83-119 2-37 (44)
54 KOG3665 ZYG-1-like serine/thre 97.9 3.1E-06 6.7E-11 95.9 0.9 159 57-237 122-282 (699)
55 KOG4341 F-box protein containi 97.9 5.1E-07 1.1E-11 91.2 -5.0 85 58-142 139-227 (483)
56 KOG4579 Leucine-rich repeat (L 97.9 7.1E-07 1.5E-11 75.9 -3.5 60 330-391 77-136 (177)
57 KOG1644 U2-associated snRNP A' 97.8 2.8E-05 6E-10 71.2 5.2 103 59-167 21-124 (233)
58 KOG4341 F-box protein containi 97.7 1.2E-06 2.6E-11 88.6 -5.1 272 16-317 139-437 (483)
59 KOG1644 U2-associated snRNP A' 97.7 5.8E-05 1.2E-09 69.2 5.6 131 7-143 12-152 (233)
60 PRK15386 type III secretion pr 97.6 0.00015 3.3E-09 75.6 7.9 57 398-457 48-104 (426)
61 PF13306 LRR_5: Leucine rich r 97.5 0.0003 6.4E-09 62.7 7.3 122 5-133 2-128 (129)
62 PRK15386 type III secretion pr 97.4 0.00046 1E-08 72.1 8.2 76 374-459 48-124 (426)
63 KOG3665 ZYG-1-like serine/thre 97.3 8.3E-05 1.8E-09 84.5 1.9 157 2-162 107-281 (699)
64 PF13306 LRR_5: Leucine rich r 97.3 0.00091 2E-08 59.5 8.0 59 78-139 8-66 (129)
65 KOG2739 Leucine-rich acidic nu 97.1 0.00025 5.3E-09 68.2 1.9 105 35-144 20-129 (260)
66 KOG2739 Leucine-rich acidic nu 97.0 0.00033 7.1E-09 67.3 2.1 106 31-140 41-152 (260)
67 KOG2123 Uncharacterized conser 96.9 6E-05 1.3E-09 72.3 -4.2 101 32-137 18-123 (388)
68 KOG2123 Uncharacterized conser 96.1 0.00034 7.4E-09 67.3 -4.2 87 205-297 19-106 (388)
69 KOG1947 Leucine rich repeat pr 96.0 0.0013 2.9E-08 73.5 -1.1 62 81-142 242-306 (482)
70 PF00560 LRR_1: Leucine Rich R 95.3 0.0072 1.6E-07 34.5 0.8 12 604-615 2-13 (22)
71 PF00560 LRR_1: Leucine Rich R 95.1 0.0073 1.6E-07 34.5 0.3 16 652-668 2-17 (22)
72 KOG1947 Leucine rich repeat pr 94.9 0.0052 1.1E-07 68.8 -1.1 62 253-317 242-306 (482)
73 KOG3864 Uncharacterized conser 94.0 0.0092 2E-07 55.2 -1.4 82 34-115 102-185 (221)
74 KOG4308 LRR-containing protein 93.2 0.0011 2.4E-08 72.2 -10.4 61 580-640 235-304 (478)
75 KOG0473 Leucine-rich repeat pr 93.2 0.0033 7.2E-08 59.1 -5.7 84 577-663 41-124 (326)
76 PF13504 LRR_7: Leucine rich r 92.9 0.063 1.4E-06 28.3 1.2 13 107-119 2-14 (17)
77 smart00370 LRR Leucine-rich re 92.8 0.1 2.2E-06 31.2 2.3 23 105-128 1-23 (26)
78 smart00369 LRR_TYP Leucine-ric 92.8 0.1 2.2E-06 31.2 2.3 23 105-128 1-23 (26)
79 KOG0473 Leucine-rich repeat pr 92.8 0.0057 1.2E-07 57.6 -4.8 96 588-686 28-123 (326)
80 PF13504 LRR_7: Leucine rich r 91.5 0.12 2.6E-06 27.3 1.3 11 604-614 3-13 (17)
81 smart00370 LRR Leucine-rich re 90.7 0.23 4.9E-06 29.6 2.2 14 626-639 2-15 (26)
82 smart00369 LRR_TYP Leucine-ric 90.7 0.23 4.9E-06 29.6 2.2 14 626-639 2-15 (26)
83 KOG4308 LRR-containing protein 90.6 0.0037 8E-08 68.1 -10.0 37 256-292 89-128 (478)
84 PF13516 LRR_6: Leucine Rich r 86.6 0.21 4.5E-06 29.1 0.0 14 626-639 2-15 (24)
85 PF13516 LRR_6: Leucine Rich r 85.6 0.19 4.2E-06 29.2 -0.4 15 82-96 2-16 (24)
86 KOG4242 Predicted myosin-I-bin 79.1 5.2 0.00011 42.5 6.6 273 230-507 165-480 (553)
87 KOG4242 Predicted myosin-I-bin 76.8 15 0.00032 39.3 9.0 84 579-662 355-452 (553)
88 smart00365 LRR_SD22 Leucine-ri 75.2 2.6 5.6E-05 25.1 1.9 14 106-119 2-15 (26)
89 KOG3864 Uncharacterized conser 74.9 0.42 9E-06 44.6 -2.3 80 83-163 102-183 (221)
90 smart00364 LRR_BAC Leucine-ric 67.9 3.8 8.2E-05 24.4 1.4 18 106-124 2-19 (26)
91 TIGR00864 PCC polycystin catio 66.3 2.5 5.4E-05 54.8 1.0 37 632-668 1-37 (2740)
92 TIGR00864 PCC polycystin catio 65.5 3.9 8.5E-05 53.2 2.4 34 608-641 1-34 (2740)
93 smart00368 LRR_RI Leucine rich 62.3 6.3 0.00014 23.9 1.8 14 626-639 2-15 (28)
94 PF08693 SKG6: Transmembrane a 47.6 12 0.00027 24.9 1.4 10 723-732 15-24 (40)
95 KOG3763 mRNA export factor TAP 47.4 7.3 0.00016 42.4 0.5 13 307-319 271-283 (585)
96 smart00367 LRR_CC Leucine-rich 41.9 18 0.0004 21.3 1.5 11 15-25 2-12 (26)
97 KOG3763 mRNA export factor TAP 41.4 21 0.00046 39.0 2.8 67 227-294 215-285 (585)
98 PF15102 TMEM154: TMEM154 prot 37.2 15 0.00033 32.5 0.8 19 731-749 70-88 (146)
99 PF04478 Mid2: Mid2 like cell 27.7 33 0.00072 30.6 1.3 7 723-729 52-58 (154)
100 PHA02898 virion envelope prote 26.5 33 0.00073 27.1 1.0 20 724-743 47-66 (92)
101 PF07204 Orthoreo_P10: Orthore 26.1 25 0.00055 28.2 0.3 29 719-747 41-69 (98)
102 PF01102 Glycophorin_A: Glycop 23.1 22 0.00047 30.7 -0.6 18 724-741 68-85 (122)
103 PHA03048 IMV membrane protein; 23.1 44 0.00095 26.5 1.1 20 724-743 46-65 (93)
104 PF15176 LRR19-TM: Leucine-ric 21.9 53 0.0012 26.9 1.4 12 724-735 18-29 (102)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.6e-63 Score=597.63 Aligned_cols=538 Identities=34% Similarity=0.476 Sum_probs=348.6
Q ss_pred CcCEEECCCCCCcccCCcccccCCCCCcEEEccCcccccccChhc-cCCCCCCEEeCCCCcCcccCCchhhcCCCCCCEE
Q 046050 58 SVKHLSMRNCYLYGTSDFQGLCELVHLQELHIGYNNIGGTLPWCL-VNMTSLRILDIASNQITGNISSSPLRYLTSLEEL 136 (779)
Q Consensus 58 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~-~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L~~L 136 (779)
+++.|++++|.+.+..+. .+..+++|++|+|++|++++.+|..+ ..+++|++|+|++|.+++.+|. +.+++|++|
T Consensus 70 ~v~~L~L~~~~i~~~~~~-~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~---~~l~~L~~L 145 (968)
T PLN00113 70 RVVSIDLSGKNISGKISS-AIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR---GSIPNLETL 145 (968)
T ss_pred cEEEEEecCCCccccCCh-HHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc---cccCCCCEE
Confidence 556666666665555442 45556666666666666655555443 3566666666666666555543 235556666
Q ss_pred EcccccccccCCcccccCCCCCcEEECcCCceeeecccCCCCCCccccEEECCCCcCCCCcchhhhCCCCCCEEEccCCC
Q 046050 137 RVSNNQFQIPISFEPFFNHSKLKKFYGQKNRLFVEIESHSLTPKFQLQNISLSGCRCDFTFPRFLYYQHELRYVDLSHMN 216 (779)
Q Consensus 137 ~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~L~~L~Ls~n~ 216 (779)
++++|.+++.++ ..+.++++|++|++++|.+.+.++ ..+..+.+|++|++++|.+.+.+|..+..+++|++|++++|.
T Consensus 146 ~Ls~n~~~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 223 (968)
T PLN00113 146 DLSNNMLSGEIP-NDIGSFSSLKVLDLGGNVLVGKIP-NSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNN 223 (968)
T ss_pred ECcCCcccccCC-hHHhcCCCCCEEECccCcccccCC-hhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCc
Confidence 666665554333 123333333322222222211111 112223344444444444444445555555555555555555
Q ss_pred CCCcCchhhhhcCCCCCEEECcCCcccccCCCCCCCCCCccEEEccCCCCCcCCchhhhhcCCCCCEEEccCCcCCcccC
Q 046050 217 LRGEFPNWLLENNKELETLLLANNSLSGFFQMPVNPLKQLTTIDVSKNFIQGHIPTGIGAFLPRLEHFNISRNVLNGSIP 296 (779)
Q Consensus 217 l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~ 296 (779)
+.+.+|..+ +++++|++|++++|.+.+..|..+..+++|++|++++|.+.+.+|..+.. +++
T Consensus 224 l~~~~p~~l-~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~---------------- 285 (968)
T PLN00113 224 LSGEIPYEI-GGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFS-LQK---------------- 285 (968)
T ss_pred cCCcCChhH-hcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhh-ccC----------------
Confidence 554444443 34455555555555554444444445555555555555444444444433 344
Q ss_pred cccccccCCccccEEEccCCcCCccccccccCCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhC
Q 046050 297 CSLHMTMGCFSLQILALSNNSLQGHIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGN 376 (779)
Q Consensus 297 ~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 376 (779)
|++|++++|.+.+.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++.+|..++.
T Consensus 286 -----------L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 354 (968)
T PLN00113 286 -----------LISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGK 354 (968)
T ss_pred -----------cCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhC
Confidence 555555555555445555555555555555555555555555555555555555555555555555555
Q ss_pred CCCCceEEccCCCCCCCcchhhcCCCCCCEEEccCccCcccCCcCcC-CCcccEEEccCCcCcccchhhHhhc--ceEEE
Q 046050 377 LSNLVDIIMPNNHLEGPIPANLCKLNFLTVLDLEVNNISGSLPSCFS-SWLLTQVHLSRNKIEGQLEDVFGDI--LVTLD 453 (779)
Q Consensus 377 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~~~L~~L~l~~n~l~~~~~~~~~~~--L~~L~ 453 (779)
+++|+.|++++|++.+..|..++.+++|+.|++++|++.+..|..+. +++|+.|++++|.+++..+..+... |+.|+
T Consensus 355 ~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 434 (968)
T PLN00113 355 HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLD 434 (968)
T ss_pred CCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEE
Confidence 55555555555555555555555555555555555555555554443 5555666666666555555555444 77788
Q ss_pred ccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCCcCcccCCchhhhhccCCCCCCCCCCCCC
Q 046050 454 LSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGTIPSCLYKTALGEGNYDSAAPTSE 533 (779)
Q Consensus 454 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~ 533 (779)
+++|.+++.++..+..+++|+.|++++|++.+..|..+ ..++|+.|++++|++++.+|..+ +
T Consensus 435 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~-------~---------- 496 (968)
T PLN00113 435 ISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKL-------G---------- 496 (968)
T ss_pred CcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhh-------h----------
Confidence 88888888888888889999999999999998888765 45899999999999998888766 1
Q ss_pred CCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeecccccceeeEEeccCCccCCCCCccccCcccCcEEEcCCCc
Q 046050 534 GNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNN 613 (779)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 613 (779)
.++.|+.|++++|++++.+|..+..+++|+.|+|++|.
T Consensus 497 ------------------------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 534 (968)
T PLN00113 497 ------------------------------------------SLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQ 534 (968)
T ss_pred ------------------------------------------hhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCc
Confidence 15678999999999999999999999999999999999
Q ss_pred CCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEccCCcCcccCCCCCCcCCCCCCCcccCCCCCCCCC
Q 046050 614 LMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVAHNNLSGKVPDRVGQFATFTENSYDGNSLLCGQP 691 (779)
Q Consensus 614 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~~~~~N~~lc~~~ 691 (779)
+++.+|..|.++++|+.|||++|++++.+|..+..+++|++|++++|+++|.+|.. +++.++...++.||+.+|+.+
T Consensus 535 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~ 611 (968)
T PLN00113 535 LSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST-GAFLAINASAVAGNIDLCGGD 611 (968)
T ss_pred ccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc-chhcccChhhhcCCccccCCc
Confidence 99999999999999999999999999999999999999999999999999999985 889999999999999999864
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.4e-59 Score=563.04 Aligned_cols=518 Identities=33% Similarity=0.483 Sum_probs=475.5
Q ss_pred CCCCcEEEccCcccccccChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCCCEEEcccccccccCCcccccCCCCCcE
Q 046050 81 LVHLQELHIGYNNIGGTLPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSLEELRVSNNQFQIPISFEPFFNHSKLKK 160 (779)
Q Consensus 81 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 160 (779)
..+++.|+|++|.+++..+..+..+++|++|+|++|+++|.+|...+..+++|++|++++|.+++.+|..
T Consensus 68 ~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~---------- 137 (968)
T PLN00113 68 SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG---------- 137 (968)
T ss_pred CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCcc----------
Confidence 4579999999999999999999999999999999999998999866778999999999999998765521
Q ss_pred EECcCCceeeecccCCCCCCccccEEECCCCcCCCCcchhhhCCCCCCEEEccCCCCCCcCchhhhhcCCCCCEEECcCC
Q 046050 161 FYGQKNRLFVEIESHSLTPKFQLQNISLSGCRCDFTFPRFLYYQHELRYVDLSHMNLRGEFPNWLLENNKELETLLLANN 240 (779)
Q Consensus 161 L~l~~~~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~L~~n 240 (779)
.+.+|++|++++|.+.+..|..++.+++|++|++++|.+.+.+|..+ .++++|++|++++|
T Consensus 138 ------------------~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~n 198 (968)
T PLN00113 138 ------------------SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL-TNLTSLEFLTLASN 198 (968)
T ss_pred ------------------ccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhh-hhCcCCCeeeccCC
Confidence 23378888888888888899999999999999999999988888875 78999999999999
Q ss_pred cccccCCCCCCCCCCccEEEccCCCCCcCCchhhhhcCCCCCEEEccCCcCCcccCcccccccCCccccEEEccCCcCCc
Q 046050 241 SLSGFFQMPVNPLKQLTTIDVSKNFIQGHIPTGIGAFLPRLEHFNISRNVLNGSIPCSLHMTMGCFSLQILALSNNSLQG 320 (779)
Q Consensus 241 ~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~L~~L~ls~n~l~~ 320 (779)
.+.+..|..+..+++|++|++++|.+.+.+|..+.. +++|++|++++|.+.+..|..+. ++++|+.|++++|.+.+
T Consensus 199 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~L~~n~l~~~~p~~l~---~l~~L~~L~L~~n~l~~ 274 (968)
T PLN00113 199 QLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGG-LTSLNHLDLVYNNLTGPIPSSLG---NLKNLQYLFLYQNKLSG 274 (968)
T ss_pred CCcCcCChHHcCcCCccEEECcCCccCCcCChhHhc-CCCCCEEECcCceeccccChhHh---CCCCCCEEECcCCeeec
Confidence 999888999999999999999999999889988876 88999999999999988887763 34489999999999999
Q ss_pred cccccccCCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCCCCCceEEccCCCCCCCcchhhcC
Q 046050 321 HIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNLSNLVDIIMPNNHLEGPIPANLCK 400 (779)
Q Consensus 321 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 400 (779)
..|..+.++++|++|++++|.+.+.+|..+.++++|++|++++|.+++..|..+..+++|+.|++++|.+.+..|..+..
T Consensus 275 ~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 354 (968)
T PLN00113 275 PIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGK 354 (968)
T ss_pred cCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEccCccCcccCCcCcC-CCcccEEEccCCcCcccchhhHhhc--ceEEEccCccccCcCchhhhcCCCCcEEE
Q 046050 401 LNFLTVLDLEVNNISGSLPSCFS-SWLLTQVHLSRNKIEGQLEDVFGDI--LVTLDLSYNRFSGRIPNWIDKLSHLSYLI 477 (779)
Q Consensus 401 l~~L~~L~L~~n~l~~~~~~~~~-~~~L~~L~l~~n~l~~~~~~~~~~~--L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 477 (779)
+++|+.|++++|++++..|..+. ...|+.|++++|.+.+..+..+..+ |+.|++++|++++..|..+..+++|+.|+
T Consensus 355 ~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 434 (968)
T PLN00113 355 HNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLD 434 (968)
T ss_pred CCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEE
Confidence 99999999999999988887766 7889999999999999988888766 99999999999999999999999999999
Q ss_pred ccCCcCcccCcccccCCCCCCEEEccCCcCcccCCchhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCcc
Q 046050 478 LANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGTIPSCLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRK 557 (779)
Q Consensus 478 L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (779)
+++|++++.+|..+..+++|+.|++++|++.+.+|..+.
T Consensus 435 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~----------------------------------------- 473 (968)
T PLN00113 435 ISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG----------------------------------------- 473 (968)
T ss_pred CcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-----------------------------------------
Confidence 999999999999999999999999999999987776440
Q ss_pred cceEEEEEcCceeeecccccceeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCc
Q 046050 558 EESVEFRTKNTSYYYQGRILKIMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNM 637 (779)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 637 (779)
.+.|+.||+++|++++.+|..+..+++|+.|+|++|++++.+|+.+.++++|++|+|++|+
T Consensus 474 -------------------~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 534 (968)
T PLN00113 474 -------------------SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQ 534 (968)
T ss_pred -------------------cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCc
Confidence 2568899999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCchhhhhcccCcEEEccCCcCcccCCCCCCcCCCCCCCcccCCCCCCCCC
Q 046050 638 LQGKIPTQLVELYALAIFSVAHNNLSGKVPDRVGQFATFTENSYDGNSLLCGQP 691 (779)
Q Consensus 638 l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~~~~~N~~lc~~~ 691 (779)
+++.+|..+..+++|+.|++++|+++|.+|..+..+..++.+.+++|+..+..|
T Consensus 535 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 535 LSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred ccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 999999999999999999999999999999988889999999999999887554
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-41 Score=339.72 Aligned_cols=371 Identities=24% Similarity=0.276 Sum_probs=248.2
Q ss_pred cEEEccCCCCCcCCchhhhhcCCCCCEEEccCCcCCcccCcccccccCCccccEEEccCCcCCccccccccCCCCCCEEE
Q 046050 257 TTIDVSKNFIQGHIPTGIGAFLPRLEHFNISRNVLNGSIPCSLHMTMGCFSLQILALSNNSLQGHIFSRSFNLTNLVTLQ 336 (779)
Q Consensus 257 ~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~ 336 (779)
++||+++|++. .+....+..+|+|+.+++.+|.++ .+|...+..+ +|+.|+|.+|.|+....+.+..++.|+.||
T Consensus 81 ~~LdlsnNkl~-~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sg---hl~~L~L~~N~I~sv~se~L~~l~alrslD 155 (873)
T KOG4194|consen 81 QTLDLSNNKLS-HIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESG---HLEKLDLRHNLISSVTSEELSALPALRSLD 155 (873)
T ss_pred eeeeccccccc-cCcHHHHhcCCcceeeeeccchhh-hccccccccc---ceeEEeeeccccccccHHHHHhHhhhhhhh
Confidence 34555555554 333333333555555555555554 3443332222 455555655555555555555666666666
Q ss_pred ccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCCCCCceEEccCCCCCCCcchhhcCCCCCCEEEccCccCcc
Q 046050 337 LDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNLSNLVDIIMPNNHLEGPIPANLCKLNFLTVLDLEVNNISG 416 (779)
Q Consensus 337 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 416 (779)
|+.|.|+...-..|..-.++++|+|++|+|+......|..+.+|..|.|+.|+++...+..|.++++|+.|+|..|+|.-
T Consensus 156 LSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iri 235 (873)
T KOG4194|consen 156 LSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRI 235 (873)
T ss_pred hhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceee
Confidence 66666664333455555666666666666666556666666666666666666665555666666666666666666653
Q ss_pred cCCcCcC-CCcccEEEccCCcCcccchhhHhhc--ceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccC
Q 046050 417 SLPSCFS-SWLLTQVHLSRNKIEGQLEDVFGDI--LVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCL 493 (779)
Q Consensus 417 ~~~~~~~-~~~L~~L~l~~n~l~~~~~~~~~~~--L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 493 (779)
..--.|. +++|+.|.+..|.+.....+.|..+ +++|+|+.|++...-..|+-+++.|+.|+|++|.|..+.++.+..
T Consensus 236 ve~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsf 315 (873)
T KOG4194|consen 236 VEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSF 315 (873)
T ss_pred ehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhh
Confidence 3233343 6666666666666666666666655 777777777777666777778888888888888888777777777
Q ss_pred CCCCCEEEccCCcCcccCCchhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeec
Q 046050 494 LKQLQLIDLSHNNLSGTIPSCLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQ 573 (779)
Q Consensus 494 l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (779)
.++|++|||++|+++ .+++..+
T Consensus 316 tqkL~~LdLs~N~i~-~l~~~sf--------------------------------------------------------- 337 (873)
T KOG4194|consen 316 TQKLKELDLSSNRIT-RLDEGSF--------------------------------------------------------- 337 (873)
T ss_pred cccceeEeccccccc-cCChhHH---------------------------------------------------------
Confidence 888888888888887 3433321
Q ss_pred ccccceeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCch---hhhCCCCCCEEECCCCcCcCCCchhhhhcc
Q 046050 574 GRILKIMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPS---TFSHLSQIESLDLSYNMLQGKIPTQLVELY 650 (779)
Q Consensus 574 ~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 650 (779)
..+..|++|+|++|.++......|..+++|++|||++|.++..+.+ .|.+|++|+.|+|.+|++..+...+|.+++
T Consensus 338 -~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~ 416 (873)
T KOG4194|consen 338 -RVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLE 416 (873)
T ss_pred -HHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCc
Confidence 1256777888888888766677788888888888888888766653 477788888888888888866667888888
Q ss_pred cCcEEEccCCcCcccCCCCCCcCCCCCCCcccCCCCCCCCCC
Q 046050 651 ALAIFSVAHNNLSGKVPDRVGQFATFTENSYDGNSLLCGQPL 692 (779)
Q Consensus 651 ~L~~L~ls~N~l~~~~p~~~~~~~~l~~~~~~~N~~lc~~~l 692 (779)
+|+.|||.+|.+...-|.+|.++ .++++-+..-..+|+|.+
T Consensus 417 ~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCql 457 (873)
T KOG4194|consen 417 ALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQL 457 (873)
T ss_pred ccceecCCCCcceeecccccccc-hhhhhhhcccceEEeccH
Confidence 88888888888887778877777 777777777778888865
No 4
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=7e-44 Score=347.21 Aligned_cols=493 Identities=25% Similarity=0.368 Sum_probs=323.3
Q ss_pred CcCEEECCCCCCcccCCcccccCCCCCcEEEccCcccccccChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCCCEEE
Q 046050 58 SVKHLSMRNCYLYGTSDFQGLCELVHLQELHIGYNNIGGTLPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSLEELR 137 (779)
Q Consensus 58 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L~~L~ 137 (779)
-++.+++++|.+....+ ++.++..|.+|++++|+++ ..|.+++.+..++.|+.++|+++ .+|+ .++.+..|+.++
T Consensus 46 ~l~~lils~N~l~~l~~--dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~-~i~s~~~l~~l~ 120 (565)
T KOG0472|consen 46 DLQKLILSHNDLEVLRE--DLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPE-QIGSLISLVKLD 120 (565)
T ss_pred chhhhhhccCchhhccH--hhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccH-HHhhhhhhhhhh
Confidence 34444555554432211 3444455555555555544 34444555555555555555554 4444 444444455555
Q ss_pred cccccccccCCcccccCCCCCcEEECcCCceeeecccCCCCCCccccEEECCCCcCCCCcchhhhCCCCCCEEEccCCCC
Q 046050 138 VSNNQFQIPISFEPFFNHSKLKKFYGQKNRLFVEIESHSLTPKFQLQNISLSGCRCDFTFPRFLYYQHELRYVDLSHMNL 217 (779)
Q Consensus 138 Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~L~~L~Ls~n~l 217 (779)
.++|.+. ..|+.++.+..++.++..+|++
T Consensus 121 ~s~n~~~---------------------------------------------------el~~~i~~~~~l~dl~~~~N~i 149 (565)
T KOG0472|consen 121 CSSNELK---------------------------------------------------ELPDSIGRLLDLEDLDATNNQI 149 (565)
T ss_pred cccccee---------------------------------------------------ecCchHHHHhhhhhhhcccccc
Confidence 4444433 3344455555566666666666
Q ss_pred CCcCchhhhhcCCCCCEEECcCCcccccCCCCCCCCCCccEEEccCCCCCcCCchhhhhcCCCCCEEEccCCcCCcccCc
Q 046050 218 RGEFPNWLLENNKELETLLLANNSLSGFFQMPVNPLKQLTTIDVSKNFIQGHIPTGIGAFLPRLEHFNISRNVLNGSIPC 297 (779)
Q Consensus 218 ~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~ 297 (779)
+ ..|..+ ..+.++..+++.+|++....+..+. ++.|+++|...|-++ .+|+.++. +.+|..|++.+|++. ..|
T Consensus 150 ~-slp~~~-~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~-l~~L~~LyL~~Nki~-~lP- 222 (565)
T KOG0472|consen 150 S-SLPEDM-VNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPELGG-LESLELLYLRRNKIR-FLP- 222 (565)
T ss_pred c-cCchHH-HHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhhcc-hhhhHHHHhhhcccc-cCC-
Confidence 6 555554 3555666666666666654444333 666777777777666 67777665 667777777777765 333
Q ss_pred ccccccCCccccEEEccCCcCCccccccccCCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCC
Q 046050 298 SLHMTMGCFSLQILALSNNSLQGHIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNL 377 (779)
Q Consensus 298 ~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 377 (779)
. +.+|..|+++.++.|.+.-.......+++++..||+++|++. ..|+.+.-+.+|++||+++|.|+ ..|..++++
T Consensus 223 e---f~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl 297 (565)
T KOG0472|consen 223 E---FPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL 297 (565)
T ss_pred C---CCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc
Confidence 2 345567777777777777333333447888888888888888 67888888888888888888888 567778888
Q ss_pred CCCceEEccCCCCCCCcchhhcCCCC---CCEE-------EccCc---------cCcccCCcCcCCCcccEEEccCCcCc
Q 046050 378 SNLVDIIMPNNHLEGPIPANLCKLNF---LTVL-------DLEVN---------NISGSLPSCFSSWLLTQVHLSRNKIE 438 (779)
Q Consensus 378 ~~L~~L~L~~n~l~~~~~~~~~~l~~---L~~L-------~L~~n---------~l~~~~~~~~~~~~L~~L~l~~n~l~ 438 (779)
.|+.|-+.+|.+.. +...+-+.+. |++| -++.. ...+..|.....-+.+.|++++-+++
T Consensus 298 -hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt 375 (565)
T KOG0472|consen 298 -HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT 375 (565)
T ss_pred -eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc
Confidence 88888888888763 2222211110 1111 01111 01122333333556888888888888
Q ss_pred ccchhhHhhc----ceEEEccCccccCcCchhhhcCCCCcE-EEccCCcCcccCcccccCCCCCCEEEccCCcCcccCCc
Q 046050 439 GQLEDVFGDI----LVTLDLSYNRFSGRIPNWIDKLSHLSY-LILANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGTIPS 513 (779)
Q Consensus 439 ~~~~~~~~~~----L~~L~L~~n~l~~~~~~~~~~l~~L~~-L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 513 (779)
..+...|... .+..+++.|++. .+|..+..+..+.+ +.+++|.+ +.+|..++.+++|..|+|++|.+- .+|.
T Consensus 376 ~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~ 452 (565)
T KOG0472|consen 376 LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPE 452 (565)
T ss_pred cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcch
Confidence 8888777644 788899999988 67777766666554 44555555 488888999999999999988886 7887
Q ss_pred hhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeecccccceeeEEeccCCccCCC
Q 046050 514 CLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIMFGLDLSCNKLTGE 593 (779)
Q Consensus 514 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ 593 (779)
.++ . +..|+.||+|.|+|. .
T Consensus 453 e~~-------~----------------------------------------------------lv~Lq~LnlS~NrFr-~ 472 (565)
T KOG0472|consen 453 EMG-------S----------------------------------------------------LVRLQTLNLSFNRFR-M 472 (565)
T ss_pred hhh-------h----------------------------------------------------hhhhheecccccccc-c
Confidence 762 2 345888999999988 8
Q ss_pred CCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEccCCcCcccCCCCCCcC
Q 046050 594 IPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVAHNNLSGKVPDRVGQF 673 (779)
Q Consensus 594 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~ 673 (779)
+|..+..+..++.+-.++|++....|+.+.+|.+|.+|||.+|.+. .+|..++++++|++|+++||+++ ..+...---
T Consensus 473 lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr~~iLmk 550 (565)
T KOG0472|consen 473 LPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPRHQILMK 550 (565)
T ss_pred chHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCHHHHhcc
Confidence 8988888888998888999999777888999999999999999998 78889999999999999999998 333322222
Q ss_pred CCCCCCcccCCC
Q 046050 674 ATFTENSYDGNS 685 (779)
Q Consensus 674 ~~l~~~~~~~N~ 685 (779)
.+...++|.+++
T Consensus 551 gT~aiL~ylrdr 562 (565)
T KOG0472|consen 551 GTAAILSYLRDR 562 (565)
T ss_pred ChHHHHHHhccc
Confidence 344445565554
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2e-41 Score=330.09 Aligned_cols=511 Identities=23% Similarity=0.310 Sum_probs=372.4
Q ss_pred CCCCCccEEEccccccccccchhhcCCCCcCEEECCCCCCcccCCcccccCCCCCcEEEccCcccccccChhccCCCCCC
Q 046050 30 LNFTNLEVLILDGSALHIRFLQSIAVLTSVKHLSMRNCYLYGTSDFQGLCELVHLQELHIGYNNIGGTLPWCLVNMTSLR 109 (779)
Q Consensus 30 ~~l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 109 (779)
+.-..++.+.+++|.+.. .-+.+..+..+.+|++++|++. ..|+ +++++..++.|+.++|+++ ++|+.++.+.+|+
T Consensus 42 W~qv~l~~lils~N~l~~-l~~dl~nL~~l~vl~~~~n~l~-~lp~-aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~ 117 (565)
T KOG0472|consen 42 WEQVDLQKLILSHNDLEV-LREDLKNLACLTVLNVHDNKLS-QLPA-AIGELEALKSLNVSHNKLS-ELPEQIGSLISLV 117 (565)
T ss_pred hhhcchhhhhhccCchhh-ccHhhhcccceeEEEeccchhh-hCCH-HHHHHHHHHHhhcccchHh-hccHHHhhhhhhh
Confidence 345578889999998874 4455788899999999999986 4553 7999999999999999998 7899999999999
Q ss_pred EEeCCCCcCcccCCchhhcCCCCCCEEEcccccccccCCcccccCCCCCcEEECcCCceeeecccCCCCCCccccEEECC
Q 046050 110 ILDIASNQITGNISSSPLRYLTSLEELRVSNNQFQIPISFEPFFNHSKLKKFYGQKNRLFVEIESHSLTPKFQLQNISLS 189 (779)
Q Consensus 110 ~L~Ls~n~i~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~L~ 189 (779)
.|+.++|.+. ++++ .++.+-.|..++..+|+++. .| ..+ ..+.++..+++.
T Consensus 118 ~l~~s~n~~~-el~~-~i~~~~~l~dl~~~~N~i~s-lp-~~~-------------------------~~~~~l~~l~~~ 168 (565)
T KOG0472|consen 118 KLDCSSNELK-ELPD-SIGRLLDLEDLDATNNQISS-LP-EDM-------------------------VNLSKLSKLDLE 168 (565)
T ss_pred hhhcccccee-ecCc-hHHHHhhhhhhhcccccccc-Cc-hHH-------------------------HHHHHHHHhhcc
Confidence 9999999999 8888 78889999999999999872 23 122 223356666677
Q ss_pred CCcCCCCcchhhhCCCCCCEEEccCCCCCCcCchhhhhcCCCCCEEECcCCcccccCCCCCCCCCCccEEEccCCCCCcC
Q 046050 190 GCRCDFTFPRFLYYQHELRYVDLSHMNLRGEFPNWLLENNKELETLLLANNSLSGFFQMPVNPLKQLTTIDVSKNFIQGH 269 (779)
Q Consensus 190 ~n~~~~~~~~~l~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~ 269 (779)
+|++....|.... ++.|++||...|-++ .+|..+ +.+.+|+.|++..|++... | .|.++..|+++.++.|+|. .
T Consensus 169 ~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~l-g~l~~L~~LyL~~Nki~~l-P-ef~gcs~L~Elh~g~N~i~-~ 242 (565)
T KOG0472|consen 169 GNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPPEL-GGLESLELLYLRRNKIRFL-P-EFPGCSLLKELHVGENQIE-M 242 (565)
T ss_pred ccchhhCCHHHHH-HHHHHhcccchhhhh-cCChhh-cchhhhHHHHhhhcccccC-C-CCCccHHHHHHHhcccHHH-h
Confidence 7776644444444 888999999988887 888876 7888999999999998764 3 7888999999999999998 8
Q ss_pred CchhhhhcCCCCCEEEccCCcCCcccCcccccccCCccccEEEccCCcCCccccccccCCCCCCEEEccCCcCccccCcc
Q 046050 270 IPTGIGAFLPRLEHFNISRNVLNGSIPCSLHMTMGCFSLQILALSNNSLQGHIFSRSFNLTNLVTLQLDANQFTGGIPEN 349 (779)
Q Consensus 270 i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 349 (779)
+|+.....++++..||+..|+++ ..|..+-... +|..||+|+|.++ ..|..++++ .|+.|.+.+|.+.. +...
T Consensus 243 lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLr---sL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrT-iRr~ 315 (565)
T KOG0472|consen 243 LPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLR---SLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRT-IRRE 315 (565)
T ss_pred hHHHHhcccccceeeeccccccc-cCchHHHHhh---hhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHH-HHHH
Confidence 89888877888888888888887 5555553222 5777777777776 445566666 67777777776652 2221
Q ss_pred ccCCCC---CCEEEccCCccCCCcchhhhCCCCCceEEccCC-CCCCCcchhhcCCCCCCEEEccCccCcccCCcCcCCC
Q 046050 350 LLNCSL---LGGLYLSDNHISGKIPKWLGNLSNLVDIIMPNN-HLEGPIPANLCKLNFLTVLDLEVNNISGSLPSCFSSW 425 (779)
Q Consensus 350 ~~~l~~---L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 425 (779)
+-.... |++|.= .+....+ .. =+.=..+.- ...+.. .......+.+.|++++-+++.++.++|...
T Consensus 316 ii~~gT~~vLKyLrs---~~~~dgl---S~---se~~~e~~~t~~~~~~-~~~~~~i~tkiL~~s~~qlt~VPdEVfea~ 385 (565)
T KOG0472|consen 316 IISKGTQEVLKYLRS---KIKDDGL---SQ---SEGGTETAMTLPSESF-PDIYAIITTKILDVSDKQLTLVPDEVFEAA 385 (565)
T ss_pred HHcccHHHHHHHHHH---hhccCCC---CC---CcccccccCCCCCCcc-cchhhhhhhhhhcccccccccCCHHHHHHh
Confidence 111111 111110 1110000 00 000000000 001111 122346678889999999987777777643
Q ss_pred c---ccEEEccCCcCcccchhhHh--hcceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEE
Q 046050 426 L---LTQVHLSRNKIEGQLEDVFG--DILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLI 500 (779)
Q Consensus 426 ~---L~~L~l~~n~l~~~~~~~~~--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 500 (779)
. ...++++.|++...+..... ...+.+++++|.+. .+|..+..+++|..|+|++|.+. .+|..++.+..|+.|
T Consensus 386 ~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~L 463 (565)
T KOG0472|consen 386 KSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTL 463 (565)
T ss_pred hhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhhee
Confidence 3 88899999999877655332 22777888888887 78888999999999999999988 788889999999999
Q ss_pred EccCCcCcccCCchhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeeccccccee
Q 046050 501 DLSHNNLSGTIPSCLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIM 580 (779)
Q Consensus 501 ~Ls~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 580 (779)
|++.|+|. .+|.+.+. +..+
T Consensus 464 nlS~NrFr-~lP~~~y~-----------------------------------------------------------lq~l 483 (565)
T KOG0472|consen 464 NLSFNRFR-MLPECLYE-----------------------------------------------------------LQTL 483 (565)
T ss_pred cccccccc-cchHHHhh-----------------------------------------------------------HHHH
Confidence 99999998 78888732 3445
Q ss_pred eEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEccCC
Q 046050 581 FGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVAHN 660 (779)
Q Consensus 581 ~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 660 (779)
+.+-.++|++....|..+.++.+|..|||.+|.+. .+|+.++++++|++|++++|++. ..++.+-.......+..-++
T Consensus 484 Etllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr~~iLmkgT~aiL~ylrd 561 (565)
T KOG0472|consen 484 ETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPRHQILMKGTAAILSYLRD 561 (565)
T ss_pred HHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCHHHHhccChHHHHHHhcc
Confidence 56666779999666667999999999999999998 89999999999999999999998 45444333333333333333
No 6
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=330.49 Aligned_cols=372 Identities=23% Similarity=0.245 Sum_probs=204.7
Q ss_pred CCEEEccCCCCCCcCchhhhhcCCCCCEEECcCCcccccCCCCCCCCCCccEEEccCCCCCcCCchhhhhcCCCCCEEEc
Q 046050 207 LRYVDLSHMNLRGEFPNWLLENNKELETLLLANNSLSGFFQMPVNPLKQLTTIDVSKNFIQGHIPTGIGAFLPRLEHFNI 286 (779)
Q Consensus 207 L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~l 286 (779)
-+.||+++|++. .+.-.+|.++++|+++++.+|.++.+ |..-....+|+.|+|.+|.|+ .+..+-.+.+|.|++|||
T Consensus 80 t~~LdlsnNkl~-~id~~~f~nl~nLq~v~l~~N~Lt~I-P~f~~~sghl~~L~L~~N~I~-sv~se~L~~l~alrslDL 156 (873)
T KOG4194|consen 80 TQTLDLSNNKLS-HIDFEFFYNLPNLQEVNLNKNELTRI-PRFGHESGHLEKLDLRHNLIS-SVTSEELSALPALRSLDL 156 (873)
T ss_pred eeeeeccccccc-cCcHHHHhcCCcceeeeeccchhhhc-ccccccccceeEEeeeccccc-cccHHHHHhHhhhhhhhh
Confidence 345666666665 44444445666666666666665542 333333344666666666665 444443333556666666
Q ss_pred cCCcCCcccCcccccccCCccccEEEccCCcCCccccccccCCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCcc
Q 046050 287 SRNVLNGSIPCSLHMTMGCFSLQILALSNNSLQGHIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHI 366 (779)
Q Consensus 287 ~~n~l~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 366 (779)
+.|.|+......+.. -.++++|+|++|.|+..-...|.++.+|..|.|+.|+++...+..|.++++|+.|+|..|+|
T Consensus 157 SrN~is~i~~~sfp~---~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~i 233 (873)
T KOG4194|consen 157 SRNLISEIPKPSFPA---KVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRI 233 (873)
T ss_pred hhchhhcccCCCCCC---CCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccce
Confidence 666555322222211 01455555555555544444455555555555555555533334444455555555555555
Q ss_pred CCCcchhhhCCCCCceEEccCCCCCCCcchhhcCCCCCCEEEccCccCcccCCcCcCCCcccEEEccCCcCcccchhhHh
Q 046050 367 SGKIPKWLGNLSNLVDIIMPNNHLEGPIPANLCKLNFLTVLDLEVNNISGSLPSCFSSWLLTQVHLSRNKIEGQLEDVFG 446 (779)
Q Consensus 367 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 446 (779)
.-.---.|.++++|+.|.+..|.+.....+.|..+.++++|+|+.|+++ .....++.
T Consensus 234 rive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~-----------------------~vn~g~lf 290 (873)
T KOG4194|consen 234 RIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ-----------------------AVNEGWLF 290 (873)
T ss_pred eeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh-----------------------hhhccccc
Confidence 4222334555555555555555555444555555555555555555554 44443333
Q ss_pred hc--ceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCCcCcccCCchhhhhccCCCC
Q 046050 447 DI--LVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGTIPSCLYKTALGEGN 524 (779)
Q Consensus 447 ~~--L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~ 524 (779)
+. |+.|++++|.|..+-++.+.-+++|++|+|++|+|+...++.|..+..|++|.|++|+++ .+.+..|.
T Consensus 291 gLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~------- 362 (873)
T KOG4194|consen 291 GLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID-HLAEGAFV------- 362 (873)
T ss_pred ccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchH-HHHhhHHH-------
Confidence 33 444555555554444444445555555555555555555555555555555555555554 22221111
Q ss_pred CCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeecccccceeeEEeccCCccCCCC---CccccCc
Q 046050 525 YDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIMFGLDLSCNKLTGEI---PFQIGYL 601 (779)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~---p~~l~~l 601 (779)
.+++|++|||++|.++..+ ...|.++
T Consensus 363 ---------------------------------------------------~lssL~~LdLr~N~ls~~IEDaa~~f~gl 391 (873)
T KOG4194|consen 363 ---------------------------------------------------GLSSLHKLDLRSNELSWCIEDAAVAFNGL 391 (873)
T ss_pred ---------------------------------------------------HhhhhhhhcCcCCeEEEEEecchhhhccc
Confidence 1345555555555554433 2346778
Q ss_pred ccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEccCCcCcccCC
Q 046050 602 NMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVAHNNLSGKVP 667 (779)
Q Consensus 602 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 667 (779)
+.|+.|+|.+|++..+...+|.+++.|+.|||.+|.|..+-|.+|..+ .|+.|-+..-.+-|.|.
T Consensus 392 ~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 392 PSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQ 456 (873)
T ss_pred hhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEecc
Confidence 888888888888886666788888888888888888888888888887 78888777766666553
No 7
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=332.51 Aligned_cols=483 Identities=25% Similarity=0.307 Sum_probs=275.0
Q ss_pred ccEEEccccccccccchhhcCCCCcCEEECCCCCCcccCCcccccCCCCCcEEEccCcccccccChhccCCCCCCEEeCC
Q 046050 35 LEVLILDGSALHIRFLQSIAVLTSVKHLSMRNCYLYGTSDFQGLCELVHLQELHIGYNNIGGTLPWCLVNMTSLRILDIA 114 (779)
Q Consensus 35 L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 114 (779)
++.|++..|.+-..+.+.+.+.-+|+.|++++|.+ +..|. .++.+.+|+.|+++.|.|. ..|.+..++.+|++|.|.
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~-~~fp~-~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~ 99 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQI-SSFPI-QITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLK 99 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeecccccc-ccCCc-hhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheec
Confidence 44444444443322233333333455555555544 23332 3444455555555555444 334444445555555555
Q ss_pred CCcCcccCCchhhcCCCCCCEEEcccccccccCCcccccCCCCCcEEECcCCceeeecccCCCCCCccccEEECCCCcCC
Q 046050 115 SNQITGNISSSPLRYLTSLEELRVSNNQFQIPISFEPFFNHSKLKKFYGQKNRLFVEIESHSLTPKFQLQNISLSGCRCD 194 (779)
Q Consensus 115 ~n~i~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~L~~n~~~ 194 (779)
+|++. .+|. .+..+.+|++||+++|.+.
T Consensus 100 ~n~l~-~lP~-~~~~lknl~~LdlS~N~f~-------------------------------------------------- 127 (1081)
T KOG0618|consen 100 NNRLQ-SLPA-SISELKNLQYLDLSFNHFG-------------------------------------------------- 127 (1081)
T ss_pred cchhh-cCch-hHHhhhcccccccchhccC--------------------------------------------------
Confidence 55544 4444 4444444455544444432
Q ss_pred CCcchhhhCCCCCCEEEccCCCCCCcCchhhhhcCCCCCEEECcCCcccccCCCCCCCCCCccEEEccCCCCCcCCchhh
Q 046050 195 FTFPRFLYYQHELRYVDLSHMNLRGEFPNWLLENNKELETLLLANNSLSGFFQMPVNPLKQLTTIDVSKNFIQGHIPTGI 274 (779)
Q Consensus 195 ~~~~~~l~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~~ 274 (779)
.+|..+..+..+++++.++|.....++. ..++.+++..|.+.+.++.....+.. .|||++|.+. ... +
T Consensus 128 -~~Pl~i~~lt~~~~~~~s~N~~~~~lg~------~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~d--l 195 (1081)
T KOG0618|consen 128 -PIPLVIEVLTAEEELAASNNEKIQRLGQ------TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-VLD--L 195 (1081)
T ss_pred -CCchhHHhhhHHHHHhhhcchhhhhhcc------ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh-hhh--h
Confidence 5666677777777888888722112221 22677777777777666666655555 6888888775 222 2
Q ss_pred hhcCCCCCEEEccCCcCCcccCcccccccCCccccEEEccCCcCCccccccccCCCCCCEEEccCCcCccccCccccCCC
Q 046050 275 GAFLPRLEHFNISRNVLNGSIPCSLHMTMGCFSLQILALSNNSLQGHIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCS 354 (779)
Q Consensus 275 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 354 (779)
.. +++|+.+....|++....- .-++++.|+.++|.+....+. ..-.+|++++++.|+++ .+|+++..+.
T Consensus 196 s~-~~~l~~l~c~rn~ls~l~~-------~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~ 264 (1081)
T KOG0618|consen 196 SN-LANLEVLHCERNQLSELEI-------SGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACA 264 (1081)
T ss_pred hh-ccchhhhhhhhcccceEEe-------cCcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcc
Confidence 22 5677777777777652211 112677777777776622221 12346777777777776 4557777777
Q ss_pred CCCEEEccCCccCCCcchhhhCCCCCceEEccCCCCCCCcchhhcCCCCCCEEEccCccCcccCCcCcC--CCcccEEEc
Q 046050 355 LLGGLYLSDNHISGKIPKWLGNLSNLVDIIMPNNHLEGPIPANLCKLNFLTVLDLEVNNISGSLPSCFS--SWLLTQVHL 432 (779)
Q Consensus 355 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~--~~~L~~L~l 432 (779)
+|+.++..+|.++ .+|..+...++|+.|.+..|.+. .+|....+.+.|++|+|..|++...++..+. ...+..+..
T Consensus 265 nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~ 342 (1081)
T KOG0618|consen 265 NLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNV 342 (1081)
T ss_pred cceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhh
Confidence 7777777777775 56666666677777777777776 5555666677777777777777644443333 223666666
Q ss_pred cCCcCcccchhh--HhhcceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCCcCccc
Q 046050 433 SRNKIEGQLEDV--FGDILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGT 510 (779)
Q Consensus 433 ~~n~l~~~~~~~--~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 510 (779)
+.|++...+... ....|+.|.+.+|.++...-..+.+..+|+.|+|++|++.......+.+++.|+.|+||+|+++ .
T Consensus 343 s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~ 421 (1081)
T KOG0618|consen 343 SSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-T 421 (1081)
T ss_pred hhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-h
Confidence 666665444211 1112666677777766665556666667777777777766555556666666677777777666 5
Q ss_pred CCchhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeecccccceeeEEeccCCcc
Q 046050 511 IPSCLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIMFGLDLSCNKL 590 (779)
Q Consensus 511 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l 590 (779)
+|.+... +..|++|...+|++
T Consensus 422 Lp~tva~-----------------------------------------------------------~~~L~tL~ahsN~l 442 (1081)
T KOG0618|consen 422 LPDTVAN-----------------------------------------------------------LGRLHTLRAHSNQL 442 (1081)
T ss_pred hhHHHHh-----------------------------------------------------------hhhhHHHhhcCCce
Confidence 5554411 34556666666666
Q ss_pred CCCCCccccCcccCcEEEcCCCcCCccC-chhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEccCC
Q 046050 591 TGEIPFQIGYLNMIRALNLSHNNLMGTI-PSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVAHN 660 (779)
Q Consensus 591 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 660 (779)
. ..| .+..++.|+.+|+|.|+++... |... .-++|++|||++|.-....-..|..+.++...++.-|
T Consensus 443 ~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~-p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 443 L-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL-PSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred e-ech-hhhhcCcceEEecccchhhhhhhhhhC-CCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 6 555 6666666666666666665332 2222 1256666666666643344445555555555555554
No 8
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-37 Score=329.51 Aligned_cols=483 Identities=24% Similarity=0.304 Sum_probs=390.5
Q ss_pred EEEccccccccccchhhcCCCCcCEEECCCCCCcccCCcccccCCCCCcEEEccCcccccccChhccCCCCCCEEeCCCC
Q 046050 37 VLILDGSALHIRFLQSIAVLTSVKHLSMRNCYLYGTSDFQGLCELVHLQELHIGYNNIGGTLPWCLVNMTSLRILDIASN 116 (779)
Q Consensus 37 ~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 116 (779)
.++.+++++. .+|..+..-..++.|+++.|.+. ..|.+.+.+..+|+.||+++|.+. ..|..+..+.+|+.|+++.|
T Consensus 2 ~vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n 78 (1081)
T KOG0618|consen 2 HVDASDEQLE-LIPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRN 78 (1081)
T ss_pred CcccccccCc-ccchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchh
Confidence 3567777776 44444444456999999999874 444556777888999999999998 67888899999999999999
Q ss_pred cCcccCCchhhcCCCCCCEEEcccccccccCCcccccCCCCCcEEECcCCceeeecccCCCCCCccccEEECCCCcCCCC
Q 046050 117 QITGNISSSPLRYLTSLEELRVSNNQFQIPISFEPFFNHSKLKKFYGQKNRLFVEIESHSLTPKFQLQNISLSGCRCDFT 196 (779)
Q Consensus 117 ~i~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~ 196 (779)
.|. .+|. ...++.+|++|.|.+|+++ .
T Consensus 79 ~i~-~vp~-s~~~~~~l~~lnL~~n~l~---------------------------------------------------~ 105 (1081)
T KOG0618|consen 79 YIR-SVPS-SCSNMRNLQYLNLKNNRLQ---------------------------------------------------S 105 (1081)
T ss_pred hHh-hCch-hhhhhhcchhheeccchhh---------------------------------------------------c
Confidence 999 8887 7889999999999999875 5
Q ss_pred cchhhhCCCCCCEEEccCCCCCCcCchhhhhcCCCCCEEECcCCcccccCCCCCCCCCCccEEEccCCCCCcCCchhhhh
Q 046050 197 FPRFLYYQHELRYVDLSHMNLRGEFPNWLLENNKELETLLLANNSLSGFFQMPVNPLKQLTTIDVSKNFIQGHIPTGIGA 276 (779)
Q Consensus 197 ~~~~l~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~~~~ 276 (779)
.|..+..+++|+.|++|.|.+. .+|..+ ..++.++.+..++|..... ++... ++.+++..|.+.+.++.+...
T Consensus 106 lP~~~~~lknl~~LdlS~N~f~-~~Pl~i-~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l~~~~~~~i~~ 178 (1081)
T KOG0618|consen 106 LPASISELKNLQYLDLSFNHFG-PIPLVI-EVLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVLGGSFLIDIYN 178 (1081)
T ss_pred CchhHHhhhcccccccchhccC-CCchhH-HhhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhcccchhcchhh
Confidence 6788888999999999999998 888876 5788899999999932222 22222 888999999988788777654
Q ss_pred cCCCCCEEEccCCcCCcccCcccccccCCccccEEEccCCcCCccccccccCCCCCCEEEccCCcCccccCccccCCCCC
Q 046050 277 FLPRLEHFNISRNVLNGSIPCSLHMTMGCFSLQILALSNNSLQGHIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLL 356 (779)
Q Consensus 277 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 356 (779)
+.. .|++.+|.+.... ...+..|+.+....|.+..... ..++|+.|+.++|.++...+.. .-.+|
T Consensus 179 -l~~--~ldLr~N~~~~~d------ls~~~~l~~l~c~rn~ls~l~~----~g~~l~~L~a~~n~l~~~~~~p--~p~nl 243 (1081)
T KOG0618|consen 179 -LTH--QLDLRYNEMEVLD------LSNLANLEVLHCERNQLSELEI----SGPSLTALYADHNPLTTLDVHP--VPLNL 243 (1081)
T ss_pred -hhe--eeecccchhhhhh------hhhccchhhhhhhhcccceEEe----cCcchheeeeccCcceeecccc--ccccc
Confidence 323 6999999886111 1234488999999998874322 4678999999999998443332 23689
Q ss_pred CEEEccCCccCCCcchhhhCCCCCceEEccCCCCCCCcchhhcCCCCCCEEEccCccCcccCCcCcCCCcccEEEccCCc
Q 046050 357 GGLYLSDNHISGKIPKWLGNLSNLVDIIMPNNHLEGPIPANLCKLNFLTVLDLEVNNISGSLPSCFSSWLLTQVHLSRNK 436 (779)
Q Consensus 357 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~L~~L~l~~n~ 436 (779)
+++++++|+++ .+|+|++.+.+|+.+...+|.+. .+|..+...++|+.|.+..|.+...+|..-...+|++|++..|+
T Consensus 244 ~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~ 321 (1081)
T KOG0618|consen 244 QYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNN 321 (1081)
T ss_pred eeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhcc
Confidence 99999999999 56799999999999999999996 88888999999999999999999877776668999999999999
Q ss_pred CcccchhhHhhc---ceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCCcCcccCCc
Q 046050 437 IEGQLEDVFGDI---LVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGTIPS 513 (779)
Q Consensus 437 l~~~~~~~~~~~---L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 513 (779)
+...++..+... +..|..+.|++.......=...+.|+.|++.+|.++...-..+.+.+.|++|+|++|++. .+|+
T Consensus 322 L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpa 400 (1081)
T KOG0618|consen 322 LPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPA 400 (1081)
T ss_pred ccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCH
Confidence 999888665544 778888888887433222234678999999999999877777899999999999999997 6776
Q ss_pred hhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeecccccceeeEEeccCCccCCC
Q 046050 514 CLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIMFGLDLSCNKLTGE 593 (779)
Q Consensus 514 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~ 593 (779)
.... .+..|++|+||+|+++ .
T Consensus 401 s~~~----------------------------------------------------------kle~LeeL~LSGNkL~-~ 421 (1081)
T KOG0618|consen 401 SKLR----------------------------------------------------------KLEELEELNLSGNKLT-T 421 (1081)
T ss_pred HHHh----------------------------------------------------------chHHhHHHhcccchhh-h
Confidence 5522 1567899999999999 8
Q ss_pred CCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCC-chhhhhcccCcEEEccCCcC
Q 046050 594 IPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKI-PTQLVELYALAIFSVAHNNL 662 (779)
Q Consensus 594 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~ls~N~l 662 (779)
+|..+..+..|++|...+|++. ..| .+.++++|+.+|+|.|+++... |.... -++|++||++||.-
T Consensus 422 Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 422 LPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNTR 488 (1081)
T ss_pred hhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCC-CcccceeeccCCcc
Confidence 8999999999999999999998 677 7999999999999999998543 33322 27999999999984
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=9.5e-34 Score=290.36 Aligned_cols=362 Identities=25% Similarity=0.342 Sum_probs=259.0
Q ss_pred CCCCEEECcCCccc-ccCCCCCCCCCCccEEEccCCCCCcCCchhhhhcCCCCCEEEccCCcCCcccCcccccccCCccc
Q 046050 230 KELETLLLANNSLS-GFFQMPVNPLKQLTTIDVSKNFIQGHIPTGIGAFLPRLEHFNISRNVLNGSIPCSLHMTMGCFSL 308 (779)
Q Consensus 230 ~~L~~L~L~~n~~~-~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~L 308 (779)
+-++-.++++|.++ +..|.....+++++.|.|...++. .+|+.+.. +.+|++|.+++|++... - .-...++.|
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~-lqkLEHLs~~HN~L~~v-h---GELs~Lp~L 80 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSR-LQKLEHLSMAHNQLISV-H---GELSDLPRL 80 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHH-HhhhhhhhhhhhhhHhh-h---hhhccchhh
Confidence 34455566666666 345666667777778888777777 78888877 67888888888877622 1 222344578
Q ss_pred cEEEccCCcCC-ccccccccCCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCCCCCceEEccC
Q 046050 309 QILALSNNSLQ-GHIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNLSNLVDIIMPN 387 (779)
Q Consensus 309 ~~L~ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 387 (779)
+.+.+..|+++ .-+|..+..+..|+.||+++|++. ..|..+...+++-.|+|++|+|..+....|.+++.|-.|+|++
T Consensus 81 Rsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~ 159 (1255)
T KOG0444|consen 81 RSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSN 159 (1255)
T ss_pred HHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhcccc
Confidence 88888888775 245667778899999999999998 7888888889999999999999865556778899999999999
Q ss_pred CCCCCCcchhhcCCCCCCEEEccCccCcccCC-cCcCCCcccEEEccCCcCc-ccchhhHhhc--ceEEEccCccccCcC
Q 046050 388 NHLEGPIPANLCKLNFLTVLDLEVNNISGSLP-SCFSSWLLTQVHLSRNKIE-GQLEDVFGDI--LVTLDLSYNRFSGRI 463 (779)
Q Consensus 388 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~~~L~~L~l~~n~l~-~~~~~~~~~~--L~~L~L~~n~l~~~~ 463 (779)
|++. .+|..+..+..|++|+|++|.+...-- ..-.+.+|+.|.+++.+-+ .-.|..+..+ |..+|+|.|.+. ..
T Consensus 160 NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~v 237 (1255)
T KOG0444|consen 160 NRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IV 237 (1255)
T ss_pred chhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cc
Confidence 9998 677778889999999999998763221 1222566777777776433 1222333333 777777777777 66
Q ss_pred chhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCCcCcccCCchhhhhccCCCCCCCCCCCCCCCCCCCCccc
Q 046050 464 PNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGTIPSCLYKTALGEGNYDSAAPTSEGNYGASSPAA 543 (779)
Q Consensus 464 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 543 (779)
|+.+-++++|+.|+|++|+|+ .+........+|++|++|.|+++ .+|.++.+
T Consensus 238 Pecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcK-------------------------- 289 (1255)
T KOG0444|consen 238 PECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCK-------------------------- 289 (1255)
T ss_pred hHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhh--------------------------
Confidence 777777777777777777776 33444455566777777777776 66766621
Q ss_pred ccccCCCCCCCCcccceEEEEEcCceeeecccccceeeEEeccCCccCC-CCCccccCcccCcEEEcCCCcCCccCchhh
Q 046050 544 GEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIMFGLDLSCNKLTG-EIPFQIGYLNMIRALNLSHNNLMGTIPSTF 622 (779)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 622 (779)
++.|+.|.+.+|+++- -+|..++.+.+|+++..++|.+. ..|+.+
T Consensus 290 ---------------------------------L~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEgl 335 (1255)
T KOG0444|consen 290 ---------------------------------LTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGL 335 (1255)
T ss_pred ---------------------------------hHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhh
Confidence 4667777777777652 46777777777777777777776 677777
Q ss_pred hCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEccCCcCc
Q 046050 623 SHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVAHNNLS 663 (779)
Q Consensus 623 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 663 (779)
..+..|+.|.|++|++. .+|+++.-++.|++||+..|+=-
T Consensus 336 cRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 336 CRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred hhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 77777777777777776 67777777777777777777543
No 10
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=5.8e-33 Score=284.65 Aligned_cols=361 Identities=27% Similarity=0.322 Sum_probs=161.2
Q ss_pred CcCEEECCCCCCcccCCcccccCCCCCcEEEccCcccccccChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCCCEEE
Q 046050 58 SVKHLSMRNCYLYGTSDFQGLCELVHLQELHIGYNNIGGTLPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSLEELR 137 (779)
Q Consensus 58 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L~~L~ 137 (779)
-+|-+|+++|.++|..-+.....++.++.|.|...++. .+|+.++.+.+|++|.+++|++. .+.. .+..++.|+.++
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhG-ELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHG-ELSDLPRLRSVI 84 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhh-hhccchhhHHHh
Confidence 34444555555543322234444555555555544444 44555555555555555555544 3333 344444555555
Q ss_pred cccccccccCCcccccCCCCCcEEECcCCceeeecccCCCCCCccccEEECCCCcCCCCcchhhhCCCCCCEEEccCCCC
Q 046050 138 VSNNQFQIPISFEPFFNHSKLKKFYGQKNRLFVEIESHSLTPKFQLQNISLSGCRCDFTFPRFLYYQHELRYVDLSHMNL 217 (779)
Q Consensus 138 Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~L~~L~Ls~n~l 217 (779)
+..|++.. .-+|..+..+..|+.||||+|++
T Consensus 85 ~R~N~LKn-------------------------------------------------sGiP~diF~l~dLt~lDLShNqL 115 (1255)
T KOG0444|consen 85 VRDNNLKN-------------------------------------------------SGIPTDIFRLKDLTILDLSHNQL 115 (1255)
T ss_pred hhcccccc-------------------------------------------------CCCCchhcccccceeeecchhhh
Confidence 55444431 11333333444444444444444
Q ss_pred CCcCchhhhhcCCCCCEEECcCCcccccCCCCCCCCCCccEEEccCCCCCcCCchhhhhcCCCCCEEEccCCcCCcccCc
Q 046050 218 RGEFPNWLLENNKELETLLLANNSLSGFFQMPVNPLKQLTTIDVSKNFIQGHIPTGIGAFLPRLEHFNISRNVLNGSIPC 297 (779)
Q Consensus 218 ~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~ 297 (779)
+ +.|..+ +...++-.|+|++|+|..+...-|-++..|-.||||+|++. .+|+.+.. +..|++|.|++|++.-.
T Consensus 116 ~-EvP~~L-E~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RR-L~~LqtL~Ls~NPL~hf--- 188 (1255)
T KOG0444|consen 116 R-EVPTNL-EYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRR-LSMLQTLKLSNNPLNHF--- 188 (1255)
T ss_pred h-hcchhh-hhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHH-HhhhhhhhcCCChhhHH---
Confidence 4 444433 33334444444444444333333334444444444444444 44444443 34445555554443310
Q ss_pred ccccccCCccccEEEccCCcCC-ccccccccCCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhC
Q 046050 298 SLHMTMGCFSLQILALSNNSLQ-GHIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGN 376 (779)
Q Consensus 298 ~~~~~~~~~~L~~L~ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 376 (779)
.+.....+.+|+.|.+++.+-+ ..+|..+..+.+|..+|++.|.+. .+|+.+.++++|+.|+|++|+|+ .+....+.
T Consensus 189 QLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~ 266 (1255)
T KOG0444|consen 189 QLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGE 266 (1255)
T ss_pred HHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHH
Confidence 0011111223444444443221 234444555555555555555555 45555555555555555555555 22233333
Q ss_pred CCCCceEEccCCCCCCCcchhhcCCCCCCEEEccCccCc--ccCCcCcCCCcccEEEccCCcCcccchhhHhhc--ceEE
Q 046050 377 LSNLVDIIMPNNHLEGPIPANLCKLNFLTVLDLEVNNIS--GSLPSCFSSWLLTQVHLSRNKIEGQLEDVFGDI--LVTL 452 (779)
Q Consensus 377 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~--L~~L 452 (779)
-.+|++|+++.|+++ .+|.+++.+++|+.|.+.+|+++ |++.+.-.+..|+.+..++|.+.-. |..++.+ |+.|
T Consensus 267 W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LElV-PEglcRC~kL~kL 344 (1255)
T KOG0444|consen 267 WENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLELV-PEGLCRCVKLQKL 344 (1255)
T ss_pred Hhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccccC-chhhhhhHHHHHh
Confidence 345555555555555 55555555555555555555543 2222222233344444444333311 1222222 3444
Q ss_pred EccCccccCcCchhhhcCCCCcEEEccCCc
Q 046050 453 DLSYNRFSGRIPNWIDKLSHLSYLILANNN 482 (779)
Q Consensus 453 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 482 (779)
.|+.|++. .+|+.+.-++.|+.|++..|.
T Consensus 345 ~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 345 KLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred ccccccee-echhhhhhcCCcceeeccCCc
Confidence 44444443 345555555555555555554
No 11
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=1.1e-27 Score=234.16 Aligned_cols=276 Identities=21% Similarity=0.152 Sum_probs=147.6
Q ss_pred CCCEEECcCCcccccCCCCCCCCCCccEEEccCCCCCcCCchhhhhcCCCCCEEEccC-CcCCcccCcccccccCCcccc
Q 046050 231 ELETLLLANNSLSGFFQMPVNPLKQLTTIDVSKNFIQGHIPTGIGAFLPRLEHFNISR-NVLNGSIPCSLHMTMGCFSLQ 309 (779)
Q Consensus 231 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~~~~~~~L~ 309 (779)
.-++++|..|+|+.+.+.+|+.+++|+.||||+|.|+ .|.+..|..++++.+|.+.+ |+|+......| .++.+++
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is-~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F---~gL~slq 143 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNIS-FIAPDAFKGLASLLSLVLYGNNKITDLPKGAF---GGLSSLQ 143 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchh-hcChHhhhhhHhhhHHHhhcCCchhhhhhhHh---hhHHHHH
Confidence 3444555555555555555555555555555555554 44444444444444444433 44442222222 2222455
Q ss_pred EEEccCCcCCccccccccCCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCccC------------CCcchhhhCC
Q 046050 310 ILALSNNSLQGHIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHIS------------GKIPKWLGNL 377 (779)
Q Consensus 310 ~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~------------~~~~~~~~~l 377 (779)
.|.+.-|++.....+.|..++++..|.+.+|.+...-...|..+..++.+.+..|.+- ...|..++..
T Consensus 144 rLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsga 223 (498)
T KOG4237|consen 144 RLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGA 223 (498)
T ss_pred HHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccc
Confidence 5555555555555556666666666666666665333335666666666666655521 1222233333
Q ss_pred CCCceEEccCCCCCCCcchhhcCC-CCCCEEEccCccCcccCC-cCcC-CCcccEEEccCCcCcccchhhHhhc--ceEE
Q 046050 378 SNLVDIIMPNNHLEGPIPANLCKL-NFLTVLDLEVNNISGSLP-SCFS-SWLLTQVHLSRNKIEGQLEDVFGDI--LVTL 452 (779)
Q Consensus 378 ~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~-~~~~-~~~L~~L~l~~n~l~~~~~~~~~~~--L~~L 452 (779)
....-..+.+.++..+.+..|... ..+..--.+.+...++.| .+|. +++|++|++++|+++.+.+.+|... +++|
T Consensus 224 rc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL 303 (498)
T KOG4237|consen 224 RCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQEL 303 (498)
T ss_pred eecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhh
Confidence 333333444444443333333211 111111111222222333 2343 6667777777777777776666655 7777
Q ss_pred EccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCCcCccc
Q 046050 453 DLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGT 510 (779)
Q Consensus 453 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 510 (779)
.|..|++.......|.++..|+.|+|.+|+|+...|.+|..+.+|.+|.+-.|.+-..
T Consensus 304 ~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~Cn 361 (498)
T KOG4237|consen 304 YLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCN 361 (498)
T ss_pred hcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCc
Confidence 7777777766666777778888888888888877778888888888888777776543
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.1e-22 Score=246.03 Aligned_cols=338 Identities=20% Similarity=0.229 Sum_probs=159.3
Q ss_pred CCCCCCCccEEEccCCC------CCcCCchhhhhcCCCCCEEEccCCcCCcccCcccccccCCccccEEEccCCcCCccc
Q 046050 249 PVNPLKQLTTIDVSKNF------IQGHIPTGIGAFLPRLEHFNISRNVLNGSIPCSLHMTMGCFSLQILALSNNSLQGHI 322 (779)
Q Consensus 249 ~l~~l~~L~~L~Ls~n~------l~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~ 322 (779)
+|..+++|+.|.+..+. +...+|.++....++|+.|.+.++.+. .+|..+.. .+|++|++++|.+. .+
T Consensus 553 aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f~~----~~L~~L~L~~s~l~-~L 626 (1153)
T PLN03210 553 AFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNFRP----ENLVKLQMQGSKLE-KL 626 (1153)
T ss_pred HHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcCCc----cCCcEEECcCcccc-cc
Confidence 34445555555554332 111234443332234555555555543 33433322 14555555555554 23
Q ss_pred cccccCCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCCCCCceEEccCCCCCCCcchhhcCCC
Q 046050 323 FSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNLSNLVDIIMPNNHLEGPIPANLCKLN 402 (779)
Q Consensus 323 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 402 (779)
+..+..+++|+.|+++++.....+|. +..+++|+.|++++|.....+|..+..+++|+.|++++|...+.+|..+ +++
T Consensus 627 ~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~ 704 (1153)
T PLN03210 627 WDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLK 704 (1153)
T ss_pred ccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCC
Confidence 34444555555555555443323332 4455555555555554444555555555555555555554333444433 455
Q ss_pred CCCEEEccCccCcccCCcCcCCCcccEEEccCCcCcccchhhHhhcceEEEccCcccc-------CcCchhhhcCCCCcE
Q 046050 403 FLTVLDLEVNNISGSLPSCFSSWLLTQVHLSRNKIEGQLEDVFGDILVTLDLSYNRFS-------GRIPNWIDKLSHLSY 475 (779)
Q Consensus 403 ~L~~L~L~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~L~~L~L~~n~l~-------~~~~~~~~~l~~L~~ 475 (779)
+|+.|++++|...+.+|.. ..+|+.|++++|.+...+...-...|+.|++.++... ...+......++|+.
T Consensus 705 sL~~L~Lsgc~~L~~~p~~--~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~ 782 (1153)
T PLN03210 705 SLYRLNLSGCSRLKSFPDI--STNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTR 782 (1153)
T ss_pred CCCEEeCCCCCCccccccc--cCCcCeeecCCCccccccccccccccccccccccchhhccccccccchhhhhccccchh
Confidence 5555555555433333321 2345555555555544332221112444444432211 111111222345666
Q ss_pred EEccCCcCcccCcccccCCCCCCEEEccCCcCcccCCchhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCC
Q 046050 476 LILANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGTIPSCLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTM 555 (779)
Q Consensus 476 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (779)
|++++|...+.+|..+.++++|+.|++++|...+.+|...
T Consensus 783 L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~---------------------------------------- 822 (1153)
T PLN03210 783 LFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI---------------------------------------- 822 (1153)
T ss_pred eeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC----------------------------------------
Confidence 6666665555556666666666666666554333444322
Q ss_pred cccceEEEEEcCceeeecccccceeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCC
Q 046050 556 RKEESVEFRTKNTSYYYQGRILKIMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSY 635 (779)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 635 (779)
.+++|+.|++++|.....+|.. .++|+.|+|++|.++ .+|..+..+++|+.|++++
T Consensus 823 --------------------~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 823 --------------------NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred --------------------CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCC
Confidence 0244555555554433333322 244555555555555 4555555555555555555
Q ss_pred CcCcCCCchhhhhcccCcEEEccCC
Q 046050 636 NMLQGKIPTQLVELYALAIFSVAHN 660 (779)
Q Consensus 636 N~l~~~~p~~l~~l~~L~~L~ls~N 660 (779)
|+--..+|..+..+++|+.+++++|
T Consensus 879 C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 879 CNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CCCcCccCcccccccCCCeeecCCC
Confidence 3222234444555555555555555
No 13
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.89 E-value=9.2e-26 Score=220.84 Aligned_cols=385 Identities=19% Similarity=0.149 Sum_probs=230.0
Q ss_pred CCcEEEccCcccccccChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCCCEEEccc-ccccccCCcccccCCCCCcEE
Q 046050 83 HLQELHIGYNNIGGTLPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSLEELRVSN-NQFQIPISFEPFFNHSKLKKF 161 (779)
Q Consensus 83 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L~~L~Ls~-n~l~~~~~~~~~~~l~~L~~L 161 (779)
.-.+++|..|.|+.+.+++|+.+++|+.||||+|+|+ .|.+++|.+++.|..|-+.+ |+|+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is-~I~p~AF~GL~~l~~Lvlyg~NkI~----------------- 129 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNIS-FIAPDAFKGLASLLSLVLYGNNKIT----------------- 129 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchh-hcChHhhhhhHhhhHHHhhcCCchh-----------------
Confidence 4456777777777767777777777777777777777 66666777777766665544 6665
Q ss_pred ECcCCceeeecccCCCCCCccccEEECCCCcCCCCcchhhhCCCCCCEEEccCCCCCCcCchhhhhcCCCCCEEECcCCc
Q 046050 162 YGQKNRLFVEIESHSLTPKFQLQNISLSGCRCDFTFPRFLYYQHELRYVDLSHMNLRGEFPNWLLENNKELETLLLANNS 241 (779)
Q Consensus 162 ~l~~~~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~L~~n~ 241 (779)
.++...|.++..++.|.+.-|++.-...+.|..++++..|.+.+|.+. .++...+..+..++.+.+..|.
T Consensus 130 ---------~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np 199 (498)
T KOG4237|consen 130 ---------DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNP 199 (498)
T ss_pred ---------hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCc
Confidence 344455555556667777777777677788888888888888888887 7777666777788888887776
Q ss_pred cc------------ccCCCCCCCCCCccEEEccCCCCCcCCchhhhhcCCCCCEE---EccCCcCCcccCcccccccCCc
Q 046050 242 LS------------GFFQMPVNPLKQLTTIDVSKNFIQGHIPTGIGAFLPRLEHF---NISRNVLNGSIPCSLHMTMGCF 306 (779)
Q Consensus 242 ~~------------~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L---~l~~n~l~~~~~~~~~~~~~~~ 306 (779)
+. ...+..++...-.....+.+.++. .+++.-+. ..++.+ -.+.+...+.-|. ..+.+++
T Consensus 200 ~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~-q~~a~kf~--c~~esl~s~~~~~d~~d~~cP~--~cf~~L~ 274 (498)
T KOG4237|consen 200 FICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRIN-QEDARKFL--CSLESLPSRLSSEDFPDSICPA--KCFKKLP 274 (498)
T ss_pred cccccccchhhhHHhhchhhcccceecchHHHHHHHhc-ccchhhhh--hhHHhHHHhhccccCcCCcChH--HHHhhcc
Confidence 22 122233333333333444444444 33333221 112222 1111211112221 2244555
Q ss_pred cccEEEccCCcCCccccccccCCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCCCCCceEEcc
Q 046050 307 SLQILALSNNSLQGHIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNLSNLVDIIMP 386 (779)
Q Consensus 307 ~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 386 (779)
+|++|++++|+++++-+.+|.+...+++|.+..|++...-...|.++..|+.|+|.+|+|+...|.+|..+.+|.+|++-
T Consensus 275 ~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~ 354 (498)
T KOG4237|consen 275 NLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLL 354 (498)
T ss_pred cceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehc
Confidence 77777777777777667777777777777777777765555667777777777777777777777777777777777776
Q ss_pred CCCCCCC-----cchhh-----------cCCCCCCEEEccCccCccc---CCcCcC----------CCcccE-EEccCCc
Q 046050 387 NNHLEGP-----IPANL-----------CKLNFLTVLDLEVNNISGS---LPSCFS----------SWLLTQ-VHLSRNK 436 (779)
Q Consensus 387 ~n~l~~~-----~~~~~-----------~~l~~L~~L~L~~n~l~~~---~~~~~~----------~~~L~~-L~l~~n~ 436 (779)
.|.+.-. ..+++ +....++.+++++..+... .|+... ++-+.+ ...++..
T Consensus 355 ~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~ 434 (498)
T KOG4237|consen 355 SNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKL 434 (498)
T ss_pred cCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccc
Confidence 6655311 00111 1122455566655544311 111110 111221 2233333
Q ss_pred CcccchhhHhhcceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCC
Q 046050 437 IEGQLEDVFGDILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHN 505 (779)
Q Consensus 437 l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 505 (779)
++..++ .++.-.+++++.+|.++ .+|.. .+.+| .+++++|++.......|.++++|.+|-|++|
T Consensus 435 lk~lp~-~iP~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 435 LKLLPR-GIPVDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hhhcCC-CCCchhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 332222 22222567788888887 45554 55667 8888888888766777888888888888876
No 14
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=7.6e-22 Score=238.78 Aligned_cols=340 Identities=20% Similarity=0.177 Sum_probs=250.4
Q ss_pred CchhhhhcCCCCCEEECcCCc------ccccCCCCCCCC-CCccEEEccCCCCCcCCchhhhhcCCCCCEEEccCCcCCc
Q 046050 221 FPNWLLENNKELETLLLANNS------LSGFFQMPVNPL-KQLTTIDVSKNFIQGHIPTGIGAFLPRLEHFNISRNVLNG 293 (779)
Q Consensus 221 ~~~~~~~~~~~L~~L~L~~n~------~~~~~~~~l~~l-~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~l~~n~l~~ 293 (779)
+....|.++++|+.|.+..+. +....|..+..+ .+|+.|++.++.+. .+|..+. ..+|+.|++.+|.+.
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f~--~~~L~~L~L~~s~l~- 624 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNFR--PENLVKLQMQGSKLE- 624 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcCC--ccCCcEEECcCcccc-
Confidence 344446778888888776543 222344555554 35888888888877 7777653 468888888888776
Q ss_pred ccCcccccccCCccccEEEccCCcCCccccccccCCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchh
Q 046050 294 SIPCSLHMTMGCFSLQILALSNNSLQGHIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKW 373 (779)
Q Consensus 294 ~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 373 (779)
.++..+ ..+++|+.|+++++.....+|. +..+++|+.|++++|.....+|..+.++++|+.|++++|...+.+|..
T Consensus 625 ~L~~~~---~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~ 700 (1153)
T PLN03210 625 KLWDGV---HSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTG 700 (1153)
T ss_pred cccccc---ccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCc
Confidence 334333 3445788888887754445553 667888888888888766678888888888888888887655566665
Q ss_pred hhCCCCCceEEccCCCCCCCcchhhcCCCCCCEEEccCccCcccCCcCcCCCcccEEEccCCcCc-------ccchhhH-
Q 046050 374 LGNLSNLVDIIMPNNHLEGPIPANLCKLNFLTVLDLEVNNISGSLPSCFSSWLLTQVHLSRNKIE-------GQLEDVF- 445 (779)
Q Consensus 374 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~L~~L~l~~n~l~-------~~~~~~~- 445 (779)
+ ++++|+.|++++|...+..|.. .++|+.|++++|.+. .+|..+.+++|+.|.+.++... ...+..+
T Consensus 701 i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~ 775 (1153)
T PLN03210 701 I-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTM 775 (1153)
T ss_pred C-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhhh
Confidence 5 6888888888888665555542 467888889888886 4555556777888888764321 1111111
Q ss_pred -hhcceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCCcCcccCCchhhhhccCCCC
Q 046050 446 -GDILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGTIPSCLYKTALGEGN 524 (779)
Q Consensus 446 -~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~ 524 (779)
...|+.|++++|...+.+|..++++++|+.|++++|...+.+|... .+++|+.|++++|.....+|..
T Consensus 776 ~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---------- 844 (1153)
T PLN03210 776 LSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---------- 844 (1153)
T ss_pred ccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc----------
Confidence 2339999999998888899999999999999999987555677665 7899999999998654344321
Q ss_pred CCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeecccccceeeEEeccCCccCCCCCccccCcccC
Q 046050 525 YDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIMFGLDLSCNKLTGEIPFQIGYLNMI 604 (779)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L 604 (779)
..+++.|+|++|.++ .+|..+..+++|
T Consensus 845 ----------------------------------------------------~~nL~~L~Ls~n~i~-~iP~si~~l~~L 871 (1153)
T PLN03210 845 ----------------------------------------------------STNISDLNLSRTGIE-EVPWWIEKFSNL 871 (1153)
T ss_pred ----------------------------------------------------ccccCEeECCCCCCc-cChHHHhcCCCC
Confidence 256889999999999 789999999999
Q ss_pred cEEEcCCCcCCccCchhhhCCCCCCEEECCCCc
Q 046050 605 RALNLSHNNLMGTIPSTFSHLSQIESLDLSYNM 637 (779)
Q Consensus 605 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 637 (779)
+.|++++|+--..+|..+..+++|+.+++++|.
T Consensus 872 ~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 872 SFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 999999955434688888999999999999985
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=5.9e-22 Score=221.63 Aligned_cols=82 Identities=27% Similarity=0.342 Sum_probs=50.3
Q ss_pred eeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEcc
Q 046050 579 IMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVA 658 (779)
Q Consensus 579 ~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls 658 (779)
.|+.|++++|+|+ .+|.. .++|+.|++++|+++ .+|.. ..+|+.|++++|+++ .+|..+.++++|+.|+++
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs 453 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVL---PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 453 (788)
T ss_pred ccceEEecCCccc-CCCCc---ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECC
Confidence 3556666666666 34432 245666677777766 34543 235666777777766 566666667777777777
Q ss_pred CCcCcccCCCC
Q 046050 659 HNNLSGKVPDR 669 (779)
Q Consensus 659 ~N~l~~~~p~~ 669 (779)
+|+|++.+|..
T Consensus 454 ~N~Ls~~~~~~ 464 (788)
T PRK15387 454 GNPLSERTLQA 464 (788)
T ss_pred CCCCCchHHHH
Confidence 77776666553
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=7e-22 Score=221.04 Aligned_cols=267 Identities=23% Similarity=0.296 Sum_probs=159.5
Q ss_pred CccEEEccCCCCCcCCchhhhhcCCCCCEEEccCCcCCcccCcccccccCCccccEEEccCCcCCccccccccCCCCCCE
Q 046050 255 QLTTIDVSKNFIQGHIPTGIGAFLPRLEHFNISRNVLNGSIPCSLHMTMGCFSLQILALSNNSLQGHIFSRSFNLTNLVT 334 (779)
Q Consensus 255 ~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~ 334 (779)
.-..|+++++.++ .+|..+. ++|+.|++.+|+++. +|.. .++|++|++++|+++. +|. ..++|+.
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt~-LP~l------p~~Lk~LdLs~N~Lts-LP~---lp~sL~~ 266 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPAL------PPELRTLEVSGNQLTS-LPV---LPPGLLE 266 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCCC-CCCC------CCCCcEEEecCCccCc-ccC---cccccce
Confidence 3455667777666 6666543 356666666666652 3321 1245555555555542 222 1234555
Q ss_pred EEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCCCCCceEEccCCCCCCCcchhhcCCCCCCEEEccCccC
Q 046050 335 LQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNLSNLVDIIMPNNHLEGPIPANLCKLNFLTVLDLEVNNI 414 (779)
Q Consensus 335 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 414 (779)
|++++|.+. .+|..+ ++|+.|++++|+++. +|. ..++|+.|++++|++
T Consensus 267 L~Ls~N~L~-~Lp~lp---~~L~~L~Ls~N~Lt~-LP~---------------------------~p~~L~~LdLS~N~L 314 (788)
T PRK15387 267 LSIFSNPLT-HLPALP---SGLCKLWIFGNQLTS-LPV---------------------------LPPGLQELSVSDNQL 314 (788)
T ss_pred eeccCCchh-hhhhch---hhcCEEECcCCcccc-ccc---------------------------cccccceeECCCCcc
Confidence 555555544 223211 234445555554442 222 123455555555555
Q ss_pred cccCCcCcCCCcccEEEccCCcCcccchhhHhhcceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCC
Q 046050 415 SGSLPSCFSSWLLTQVHLSRNKIEGQLEDVFGDILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLL 494 (779)
Q Consensus 415 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 494 (779)
++. |.. ...|+.|++++|.+++++. +...|+.|++++|++++ +|.. .++|+.|++++|++++ +|.. .
T Consensus 315 ~~L-p~l--p~~L~~L~Ls~N~L~~LP~--lp~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~ 381 (788)
T PRK15387 315 ASL-PAL--PSELCKLWAYNNQLTSLPT--LPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---P 381 (788)
T ss_pred ccC-CCC--cccccccccccCccccccc--cccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---c
Confidence 432 211 1234555555555554332 22337777777777774 4432 3567788888888874 4543 3
Q ss_pred CCCCEEEccCCcCcccCCchhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeecc
Q 046050 495 KQLQLIDLSHNNLSGTIPSCLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQG 574 (779)
Q Consensus 495 ~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (779)
.+|+.|++++|+++ .+|..
T Consensus 382 ~~L~~LdLs~N~Lt-~LP~l------------------------------------------------------------ 400 (788)
T PRK15387 382 SGLKELIVSGNRLT-SLPVL------------------------------------------------------------ 400 (788)
T ss_pred cccceEEecCCccc-CCCCc------------------------------------------------------------
Confidence 56888999999887 34432
Q ss_pred cccceeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhc
Q 046050 575 RILKIMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVEL 649 (779)
Q Consensus 575 ~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 649 (779)
++.|+.|++++|+++ .+|.. ..+|+.|++++|+++ .+|..+.++++|+.|+|++|++++..|..+..+
T Consensus 401 --~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 401 --PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred --ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 245778899999988 46654 356788999999998 789889999999999999999998888877554
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.80 E-value=1.9e-19 Score=203.23 Aligned_cols=164 Identities=27% Similarity=0.429 Sum_probs=79.5
Q ss_pred CCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCCCCCceEEccCCCCCCCcchhhcCCCCCCEEEcc
Q 046050 331 NLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNLSNLVDIIMPNNHLEGPIPANLCKLNFLTVLDLE 410 (779)
Q Consensus 331 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 410 (779)
.|+.|++++|+++ .+|..+. ++|++|++++|+++ .+|..+. ++|+.|++++|.+. .+|..+. .+|+.|+++
T Consensus 200 ~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls 270 (754)
T PRK15370 200 QITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLF 270 (754)
T ss_pred CCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECc
Confidence 4455555555554 3333322 34555555555554 2333332 24555555555555 3344332 345555555
Q ss_pred CccCcccCCcCcCCCcccEEEccCCcCcccchhhHhhcceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCccc
Q 046050 411 VNNISGSLPSCFSSWLLTQVHLSRNKIEGQLEDVFGDILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQ 490 (779)
Q Consensus 411 ~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 490 (779)
+|+++. +|..+ ..+|+.|++++|+++..+.. +...|+.|++++|+++. +|..+ .++|+.|++++|.+++ +|..
T Consensus 271 ~N~L~~-LP~~l-~~sL~~L~Ls~N~Lt~LP~~-lp~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~ 343 (754)
T PRK15370 271 HNKISC-LPENL-PEELRYLSVYDNSIRTLPAH-LPSGITHLNVQSNSLTA-LPETL--PPGLKTLEAGENALTS-LPAS 343 (754)
T ss_pred CCccCc-ccccc-CCCCcEEECCCCccccCccc-chhhHHHHHhcCCcccc-CCccc--cccceeccccCCcccc-CChh
Confidence 555553 22221 13455555555555543321 22235566666666653 33322 2456666666666663 3443
Q ss_pred ccCCCCCCEEEccCCcCcccCCc
Q 046050 491 LCLLKQLQLIDLSHNNLSGTIPS 513 (779)
Q Consensus 491 ~~~l~~L~~L~Ls~N~l~~~~p~ 513 (779)
+. ++|+.|++++|+++ .+|.
T Consensus 344 l~--~sL~~L~Ls~N~L~-~LP~ 363 (754)
T PRK15370 344 LP--PELQVLDVSKNQIT-VLPE 363 (754)
T ss_pred hc--CcccEEECCCCCCC-cCCh
Confidence 32 46666666666665 3443
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.80 E-value=2.1e-19 Score=202.93 Aligned_cols=247 Identities=26% Similarity=0.372 Sum_probs=189.7
Q ss_pred CCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCCCCCceEEccCCCCCCCcchhhcCCCCCCEEEc
Q 046050 330 TNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNLSNLVDIIMPNNHLEGPIPANLCKLNFLTVLDL 409 (779)
Q Consensus 330 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 409 (779)
.+...|++++++++ .+|..+. +.++.|++++|+++ .+|..+. ++|++|++++|+++ .+|..+. ++|+.|++
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 35678889888888 5676554 57999999999999 4565553 58999999999998 5666553 57999999
Q ss_pred cCccCcccCCcCcCCCcccEEEccCCcCcccchhhHhhcceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcc
Q 046050 410 EVNNISGSLPSCFSSWLLTQVHLSRNKIEGQLEDVFGDILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPV 489 (779)
Q Consensus 410 ~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 489 (779)
++|.+.. +|..+ ..+|+.|++++|+++.++. .+...|+.|++++|++++ +|..+. ++|+.|++++|+++. +|.
T Consensus 249 s~N~L~~-LP~~l-~s~L~~L~Ls~N~L~~LP~-~l~~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~ 321 (754)
T PRK15370 249 SINRITE-LPERL-PSALQSLDLFHNKISCLPE-NLPEELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPE 321 (754)
T ss_pred cCCccCc-CChhH-hCCCCEEECcCCccCcccc-ccCCCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCc
Confidence 9999984 44433 3579999999999986543 344469999999999985 454432 478899999999984 454
Q ss_pred cccCCCCCCEEEccCCcCcccCCchhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCce
Q 046050 490 QLCLLKQLQLIDLSHNNLSGTIPSCLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTS 569 (779)
Q Consensus 490 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (779)
.+ .++|+.|++++|.++ .+|..+
T Consensus 322 ~l--~~sL~~L~Ls~N~Lt-~LP~~l------------------------------------------------------ 344 (754)
T PRK15370 322 TL--PPGLKTLEAGENALT-SLPASL------------------------------------------------------ 344 (754)
T ss_pred cc--cccceeccccCCccc-cCChhh------------------------------------------------------
Confidence 33 268999999999987 366544
Q ss_pred eeecccccceeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhh-
Q 046050 570 YYYQGRILKIMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVE- 648 (779)
Q Consensus 570 ~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~- 648 (779)
+++|+.|++++|+++ .+|..+. +.|+.|+|++|+++ .+|..+. .+|+.|++++|+++ .+|..+..
T Consensus 345 -------~~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~ 410 (754)
T PRK15370 345 -------PPELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHF 410 (754)
T ss_pred -------cCcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHH
Confidence 357889999999998 5776553 68999999999998 5666654 47999999999998 56655443
Q ss_pred ---cccCcEEEccCCcCc
Q 046050 649 ---LYALAIFSVAHNNLS 663 (779)
Q Consensus 649 ---l~~L~~L~ls~N~l~ 663 (779)
++.+..+++.+|+++
T Consensus 411 ~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 411 RGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hhcCCCccEEEeeCCCcc
Confidence 478899999999987
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.72 E-value=1.7e-18 Score=182.61 Aligned_cols=61 Identities=20% Similarity=0.280 Sum_probs=34.7
Q ss_pred ccCcEEEcCCCcCCc----cCchhhhCCCCCCEEECCCCcCcCC----Cchhhhhc-ccCcEEEccCCcC
Q 046050 602 NMIRALNLSHNNLMG----TIPSTFSHLSQIESLDLSYNMLQGK----IPTQLVEL-YALAIFSVAHNNL 662 (779)
Q Consensus 602 ~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l-~~L~~L~ls~N~l 662 (779)
+.|+.|++++|.++. .+...+..+++|+.+++++|.++.. ....+... +.|+.+++.+|++
T Consensus 250 ~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 250 ISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 566666666666651 2334455556677777777777643 23333333 5666666666653
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.69 E-value=4.8e-18 Score=179.09 Aligned_cols=204 Identities=23% Similarity=0.235 Sum_probs=96.9
Q ss_pred EEcccccccc-ccchhhcCCCCcCEEECCCCCCccc----CCcccccCCCCCcEEEccCccccc------ccChhccCCC
Q 046050 38 LILDGSALHI-RFLQSIAVLTSVKHLSMRNCYLYGT----SDFQGLCELVHLQELHIGYNNIGG------TLPWCLVNMT 106 (779)
Q Consensus 38 L~L~~~~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~~l~~L~~L~Ls~n~i~~------~~~~~~~~l~ 106 (779)
|+|.++.+++ .....+..+.+|++|+++++.+... ++ ..+...++|++|+++++.+.+ .++..+.+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~-~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALA-SALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHH-HHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4455555542 2233444555566666666665321 11 123445556666666665541 2334455666
Q ss_pred CCCEEeCCCCcCcccCCchhhcCCCC---CCEEEcccccccccCCc---ccccCCCCCcEEECcCCceeeecccCCCCCC
Q 046050 107 SLRILDIASNQITGNISSSPLRYLTS---LEELRVSNNQFQIPISF---EPFFNHSKLKKFYGQKNRLFVEIESHSLTPK 180 (779)
Q Consensus 107 ~L~~L~Ls~n~i~~~i~~~~~~~l~~---L~~L~Ls~n~l~~~~~~---~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~ 180 (779)
+|+.|++++|.+.+..+. .+..+.+ |++|++++|++++.... ..+..+ .
T Consensus 82 ~L~~L~l~~~~~~~~~~~-~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~------------------------~ 136 (319)
T cd00116 82 GLQELDLSDNALGPDGCG-VLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDL------------------------P 136 (319)
T ss_pred ceeEEEccCCCCChhHHH-HHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhC------------------------C
Confidence 677777766666532222 3333333 66666666665421000 001111 0
Q ss_pred ccccEEECCCCcCCCC----cchhhhCCCCCCEEEccCCCCCCcCchhh---hhcCCCCCEEECcCCcccccC----CCC
Q 046050 181 FQLQNISLSGCRCDFT----FPRFLYYQHELRYVDLSHMNLRGEFPNWL---LENNKELETLLLANNSLSGFF----QMP 249 (779)
Q Consensus 181 ~~L~~L~L~~n~~~~~----~~~~l~~~~~L~~L~Ls~n~l~~~~~~~~---~~~~~~L~~L~L~~n~~~~~~----~~~ 249 (779)
.+|++|++++|.+++. ++..+..+++|++|++++|.+++.....+ +...++|++|++++|.+.+.. ...
T Consensus 137 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~ 216 (319)
T cd00116 137 PALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAET 216 (319)
T ss_pred CCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHH
Confidence 2444444444444421 23344455566666666666653211111 123345666666666554221 122
Q ss_pred CCCCCCccEEEccCCCCC
Q 046050 250 VNPLKQLTTIDVSKNFIQ 267 (779)
Q Consensus 250 l~~l~~L~~L~Ls~n~l~ 267 (779)
+..+++|++|++++|.++
T Consensus 217 ~~~~~~L~~L~ls~n~l~ 234 (319)
T cd00116 217 LASLKSLEVLNLGDNNLT 234 (319)
T ss_pred hcccCCCCEEecCCCcCc
Confidence 344555666666666555
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.66 E-value=4.3e-18 Score=148.12 Aligned_cols=89 Identities=30% Similarity=0.406 Sum_probs=52.6
Q ss_pred CCcCcCCCcccEEEccCCcCcccchhhHhhc-ceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCC
Q 046050 418 LPSCFSSWLLTQVHLSRNKIEGQLEDVFGDI-LVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQ 496 (779)
Q Consensus 418 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 496 (779)
+++.|.+..++.|.+++|+++..+|..-.-. |+.|++++|+++ ..|..++.++.|+.|+++-|++. ..|..|+.++.
T Consensus 26 ~~gLf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~ 103 (264)
T KOG0617|consen 26 LPGLFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPA 103 (264)
T ss_pred cccccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCch
Confidence 4445555556666666666665544322211 556666666665 45555666666666666666665 55666666666
Q ss_pred CCEEEccCCcCc
Q 046050 497 LQLIDLSHNNLS 508 (779)
Q Consensus 497 L~~L~Ls~N~l~ 508 (779)
|++|||++|++.
T Consensus 104 levldltynnl~ 115 (264)
T KOG0617|consen 104 LEVLDLTYNNLN 115 (264)
T ss_pred hhhhhccccccc
Confidence 666666666664
No 22
>PLN03150 hypothetical protein; Provisional
Probab=99.59 E-value=4.9e-15 Score=167.43 Aligned_cols=119 Identities=36% Similarity=0.617 Sum_probs=108.7
Q ss_pred eeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEcc
Q 046050 579 IMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVA 658 (779)
Q Consensus 579 ~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls 658 (779)
.++.|+|++|.+.|.+|..++.+++|+.|+|++|.++|.+|..++.+++|+.|||++|+++|.+|..+..+++|++|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcccCCCCCCc-CCCCCCCcccCCCCCCCCCCCCCCC
Q 046050 659 HNNLSGKVPDRVGQ-FATFTENSYDGNSLLCGQPLSESCY 697 (779)
Q Consensus 659 ~N~l~~~~p~~~~~-~~~l~~~~~~~N~~lc~~~l~~~c~ 697 (779)
+|+++|.+|..++. +..+..+.+.+|+.+|+.|....|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 99999999987654 2345667899999999987655674
No 23
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.57 E-value=6.3e-17 Score=140.92 Aligned_cols=160 Identities=32% Similarity=0.461 Sum_probs=101.7
Q ss_pred CCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCCCCCceEEccCCCCCCCcchhhcCCCCCCEE
Q 046050 328 NLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNLSNLVDIIMPNNHLEGPIPANLCKLNFLTVL 407 (779)
Q Consensus 328 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 407 (779)
++.+++.|.+++|+++ .+|..+..+.+|+.|++++|+|. .+|..+..++.|+.|++.-|++. ..|..|+.++.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 4455566666666666 45555666666666666666666 45556666666666666666665 556666666666666
Q ss_pred EccCccCcc-cCCcCcC-CCcccEEEccCCcCcccchhhHhhcceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcc
Q 046050 408 DLEVNNISG-SLPSCFS-SWLLTQVHLSRNKIEGQLEDVFGDILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEG 485 (779)
Q Consensus 408 ~L~~n~l~~-~~~~~~~-~~~L~~L~l~~n~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 485 (779)
|+.+|++.. ..|+.|. +.. |+.|.+++|.+. .+|..++++++|+.|.+++|.+.
T Consensus 108 dltynnl~e~~lpgnff~m~t----------------------lralyl~dndfe-~lp~dvg~lt~lqil~lrdndll- 163 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTT----------------------LRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL- 163 (264)
T ss_pred hccccccccccCCcchhHHHH----------------------HHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-
Confidence 666665542 2333222 333 455555555555 66677777888888888888776
Q ss_pred cCcccccCCCCCCEEEccCCcCcccCCchh
Q 046050 486 EVPVQLCLLKQLQLIDLSHNNLSGTIPSCL 515 (779)
Q Consensus 486 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 515 (779)
..|..++.+..|+.|++.+|+++ .+|+.+
T Consensus 164 ~lpkeig~lt~lrelhiqgnrl~-vlppel 192 (264)
T KOG0617|consen 164 SLPKEIGDLTRLRELHIQGNRLT-VLPPEL 192 (264)
T ss_pred hCcHHHHHHHHHHHHhcccceee-ecChhh
Confidence 56777777778888888888877 666666
No 24
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.33 E-value=1.5e-13 Score=141.89 Aligned_cols=173 Identities=31% Similarity=0.482 Sum_probs=139.5
Q ss_pred CCcccEEEccCCcCcccchhhHh-hcceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEc
Q 046050 424 SWLLTQVHLSRNKIEGQLEDVFG-DILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDL 502 (779)
Q Consensus 424 ~~~L~~L~l~~n~l~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 502 (779)
+..-...|++.|++..++...-. ..|+.+.++.|.+. .+|..+.++..|.+|+|+.|+++ ..|..++.++ |+.|-+
T Consensus 74 ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~ 150 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIV 150 (722)
T ss_pred ccchhhhhccccccccCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEE
Confidence 33445667777777766554332 22888888888887 67888999999999999999998 7777888876 899999
Q ss_pred cCCcCcccCCchhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeecccccceeeE
Q 046050 503 SHNNLSGTIPSCLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIMFG 582 (779)
Q Consensus 503 s~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~ 582 (779)
++|+++ .+|..+ | ....|..
T Consensus 151 sNNkl~-~lp~~i-------g----------------------------------------------------~~~tl~~ 170 (722)
T KOG0532|consen 151 SNNKLT-SLPEEI-------G----------------------------------------------------LLPTLAH 170 (722)
T ss_pred ecCccc-cCCccc-------c----------------------------------------------------cchhHHH
Confidence 999997 677766 2 1456778
Q ss_pred EeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEccCCcC
Q 046050 583 LDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVAHNNL 662 (779)
Q Consensus 583 LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l 662 (779)
||.+.|++. .+|..++++.+|+.|++..|++. ..|.++..| .|..||+|+|+++ .+|..|.+|..|++|-|.+|+|
T Consensus 171 ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPL 246 (722)
T KOG0532|consen 171 LDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPL 246 (722)
T ss_pred hhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCC
Confidence 999999998 78888999999999999999988 567677754 5888999999998 8899999999999999999999
Q ss_pred c
Q 046050 663 S 663 (779)
Q Consensus 663 ~ 663 (779)
+
T Consensus 247 q 247 (722)
T KOG0532|consen 247 Q 247 (722)
T ss_pred C
Confidence 7
No 25
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.26 E-value=1.9e-13 Score=141.27 Aligned_cols=172 Identities=31% Similarity=0.480 Sum_probs=154.0
Q ss_pred ceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCCcCcccCCchhhhhccCCCCCCCC
Q 046050 449 LVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGTIPSCLYKTALGEGNYDSA 528 (779)
Q Consensus 449 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~~~~~ 528 (779)
-...|++.|++. .+|..+..+..|..+.|.+|.+. .+|..++++..|.++||+.|+++ .+|..++.
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~----------- 142 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCD----------- 142 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhc-----------
Confidence 557899999998 78888889999999999999998 78999999999999999999998 67766521
Q ss_pred CCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeecccccceeeEEeccCCccCCCCCccccCcccCcEEE
Q 046050 529 APTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIMFGLDLSCNKLTGEIPFQIGYLNMIRALN 608 (779)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~ 608 (779)
--|+.|-+++|+++ .+|+.++.+..|..||
T Consensus 143 -------------------------------------------------lpLkvli~sNNkl~-~lp~~ig~~~tl~~ld 172 (722)
T KOG0532|consen 143 -------------------------------------------------LPLKVLIVSNNKLT-SLPEEIGLLPTLAHLD 172 (722)
T ss_pred -------------------------------------------------CcceeEEEecCccc-cCCcccccchhHHHhh
Confidence 13678999999999 8999999999999999
Q ss_pred cCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEccCCcCcccCCCCCCcCCCCCCCcccCCCCCC
Q 046050 609 LSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVAHNNLSGKVPDRVGQFATFTENSYDGNSLLC 688 (779)
Q Consensus 609 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~~~~~N~~lc 688 (779)
.|.|.+. .+|..++++.+|+.|.++.|++. ..|..+..| .|..||+|.|+++ .||-.|..+..+..+-++.||..-
T Consensus 173 ~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 173 VSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred hhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCC
Confidence 9999998 78889999999999999999998 778888865 4899999999999 789889999999999999999764
No 26
>PLN03150 hypothetical protein; Provisional
Probab=99.23 E-value=2.7e-11 Score=137.17 Aligned_cols=92 Identities=29% Similarity=0.504 Sum_probs=85.0
Q ss_pred cceeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhc-ccCcEE
Q 046050 577 LKIMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVEL-YALAIF 655 (779)
Q Consensus 577 l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L 655 (779)
++.|+.|+|++|.++|.+|..++.+++|+.|+|++|++++.+|+.++++++|+.|+|++|+++|.+|..+..+ .++..+
T Consensus 441 L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l 520 (623)
T PLN03150 441 LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASF 520 (623)
T ss_pred CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceE
Confidence 5689999999999999999999999999999999999999999999999999999999999999999998774 577899
Q ss_pred EccCCcCcccCCC
Q 046050 656 SVAHNNLSGKVPD 668 (779)
Q Consensus 656 ~ls~N~l~~~~p~ 668 (779)
++++|+..|.+|.
T Consensus 521 ~~~~N~~lc~~p~ 533 (623)
T PLN03150 521 NFTDNAGLCGIPG 533 (623)
T ss_pred EecCCccccCCCC
Confidence 9999987776654
No 27
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.22 E-value=1.6e-11 Score=133.19 Aligned_cols=179 Identities=32% Similarity=0.399 Sum_probs=120.0
Q ss_pred CcccEEEccCCcCcccchhhHhh--cceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEc
Q 046050 425 WLLTQVHLSRNKIEGQLEDVFGD--ILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDL 502 (779)
Q Consensus 425 ~~L~~L~l~~n~l~~~~~~~~~~--~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 502 (779)
..++.+++.+|.++.+.+..... .|+.|++++|++. .+|..+..+++|+.|++++|++. .+|......+.|+.|++
T Consensus 116 ~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 116 TNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred cceeEEecCCcccccCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 33444444444444444333222 3666666666666 44456777888888888888887 44444446778888888
Q ss_pred cCCcCcccCCchhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeecccccceeeE
Q 046050 503 SHNNLSGTIPSCLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIMFG 582 (779)
Q Consensus 503 s~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~ 582 (779)
++|+++ .+|... ..+..|++
T Consensus 194 s~N~i~-~l~~~~-----------------------------------------------------------~~~~~L~~ 213 (394)
T COG4886 194 SGNKIS-DLPPEI-----------------------------------------------------------ELLSALEE 213 (394)
T ss_pred cCCccc-cCchhh-----------------------------------------------------------hhhhhhhh
Confidence 888887 555532 00344777
Q ss_pred EeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEccCCcC
Q 046050 583 LDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVAHNNL 662 (779)
Q Consensus 583 LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l 662 (779)
+++++|.+. ..+..+..+..+..|.+++|++. ..+..++.++++++|++++|+++...+ +..+.+++.|++++|.+
T Consensus 214 l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~ 289 (394)
T COG4886 214 LDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSL 289 (394)
T ss_pred hhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccccccc--ccccCccCEEeccCccc
Confidence 888888655 56667777888888888888877 346777788888888888888874433 77788888888888888
Q ss_pred cccCCCC
Q 046050 663 SGKVPDR 669 (779)
Q Consensus 663 ~~~~p~~ 669 (779)
+...|..
T Consensus 290 ~~~~~~~ 296 (394)
T COG4886 290 SNALPLI 296 (394)
T ss_pred cccchhh
Confidence 7666653
No 28
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.13 E-value=7.9e-12 Score=119.17 Aligned_cols=62 Identities=27% Similarity=0.360 Sum_probs=32.0
Q ss_pred cccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCC-chhhhhcccCcEEEccCCcCcc
Q 046050 601 LNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKI-PTQLVELYALAIFSVAHNNLSG 664 (779)
Q Consensus 601 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~ls~N~l~~ 664 (779)
+-+.+.|.|+.|.|. .-..++.+-+|..||+++|+|.... -..++++|.|+.+.+.+|++.+
T Consensus 351 LGNIKtL~La~N~iE--~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 351 LGNIKTLKLAQNKIE--TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hcCEeeeehhhhhHh--hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 444455555555553 1223445555556666666554221 1244556666666666666654
No 29
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.13 E-value=8.2e-11 Score=127.63 Aligned_cols=151 Identities=34% Similarity=0.440 Sum_probs=65.6
Q ss_pred CCCCEEEccCCccCCCcchhhhCCC-CCceEEccCCCCCCCcchhhcCCCCCCEEEccCccCcccCCcCcCCCcccEEEc
Q 046050 354 SLLGGLYLSDNHISGKIPKWLGNLS-NLVDIIMPNNHLEGPIPANLCKLNFLTVLDLEVNNISGSLPSCFSSWLLTQVHL 432 (779)
Q Consensus 354 ~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~L~~L~l 432 (779)
+.++.+++.+|.++ .++....... +|+.|++++|++. .+|..+..++.|+.|++++|+++...+.....+.|+.|++
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNNLDL 193 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhhhhhhhhhhhhhhhheec
Confidence 33444444444444 2223233332 4444444444444 3333344445555555555554432222223444444444
Q ss_pred cCCcCcccchhh-HhhcceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCCcCc
Q 046050 433 SRNKIEGQLEDV-FGDILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHNNLS 508 (779)
Q Consensus 433 ~~n~l~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 508 (779)
++|++..+++.. ....|+++.+++|.+. ..+..+.++.++..+.+.+|++.. .+..+..+++++.|++++|.++
T Consensus 194 s~N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 194 SGNKISDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred cCCccccCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccchhccccccceecccccccc
Confidence 444444443332 2222455555555322 233444555555555555555542 2333444444555555555444
No 30
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=9.5e-12 Score=125.06 Aligned_cols=108 Identities=25% Similarity=0.270 Sum_probs=44.5
Q ss_pred cccEEECCCCcCCCC-cchhhhCCCCCCEEEccCCCCCCcCchhhhhcCCCCCEEECcCCcccccCC-CCCCCCCCccEE
Q 046050 182 QLQNISLSGCRCDFT-FPRFLYYQHELRYVDLSHMNLRGEFPNWLLENNKELETLLLANNSLSGFFQ-MPVNPLKQLTTI 259 (779)
Q Consensus 182 ~L~~L~L~~n~~~~~-~~~~l~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~-~~l~~l~~L~~L 259 (779)
+|+.|.++.|+++.. +...+..+|+|+.|++.+|.....-... .+.+..|++|+|++|.+..... ...+.++.|+.|
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~-~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATS-TKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecch-hhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 444444444444322 1122334455555555555311111000 1223445555555555443221 123445555555
Q ss_pred EccCCCCCcCCc--hh----hhhcCCCCCEEEccCCcC
Q 046050 260 DVSKNFIQGHIP--TG----IGAFLPRLEHFNISRNVL 291 (779)
Q Consensus 260 ~Ls~n~l~~~i~--~~----~~~~l~~L~~L~l~~n~l 291 (779)
+++.+.+. .+. +. ....+++|++|++..|++
T Consensus 277 nls~tgi~-si~~~d~~s~~kt~~f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 277 NLSSTGIA-SIAEPDVESLDKTHTFPKLEYLNISENNI 313 (505)
T ss_pred hccccCcc-hhcCCCccchhhhcccccceeeecccCcc
Confidence 55555544 211 11 012245566666666655
No 31
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.10 E-value=1.4e-11 Score=120.60 Aligned_cols=140 Identities=17% Similarity=0.206 Sum_probs=90.0
Q ss_pred ccchhhhhCCCCCCcEEeCCCCccc----------cCCCCCccEEEcccc---ccccccc-------hhhcCCCCcCEEE
Q 046050 4 SSLLQSLWTPFPNLETLELRDYHLE----------LLNFTNLEVLILDGS---ALHIRFL-------QSIAVLTSVKHLS 63 (779)
Q Consensus 4 ~~~~~~~~~~~~~L~~L~Ls~~~~~----------~~~l~~L~~L~L~~~---~~~~~~~-------~~~~~l~~L~~L~ 63 (779)
.+.+-........+++++||+|.+. +.+-+.|+..+++.- +.....| +++..+++|++|+
T Consensus 19 ~~~v~~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ld 98 (382)
T KOG1909|consen 19 EKDVEEELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLD 98 (382)
T ss_pred hhhHHHHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEee
Confidence 4556677788999999999999983 556778888888763 2222233 4456777899999
Q ss_pred CCCCCCcccCC--c-ccccCCCCCcEEEccCcccccccC-------------hhccCCCCCCEEeCCCCcCcccCCc---
Q 046050 64 MRNCYLYGTSD--F-QGLCELVHLQELHIGYNNIGGTLP-------------WCLVNMTSLRILDIASNQITGNISS--- 124 (779)
Q Consensus 64 L~~n~l~~~~~--~-~~~~~l~~L~~L~Ls~n~i~~~~~-------------~~~~~l~~L~~L~Ls~n~i~~~i~~--- 124 (779)
||.|.+....+ . +-+.++..|++|.|.+|.+.-.-. ...+.-++|+++...+|++. .-+.
T Consensus 99 LSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrle-n~ga~~~ 177 (382)
T KOG1909|consen 99 LSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLE-NGGATAL 177 (382)
T ss_pred ccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccc-cccHHHH
Confidence 99998842211 1 234567888888888887653211 12234466777777777765 2221
Q ss_pred -hhhcCCCCCCEEEccccccc
Q 046050 125 -SPLRYLTSLEELRVSNNQFQ 144 (779)
Q Consensus 125 -~~~~~l~~L~~L~Ls~n~l~ 144 (779)
..|...+.|+.+.++.|.|.
T Consensus 178 A~~~~~~~~leevr~~qN~I~ 198 (382)
T KOG1909|consen 178 AEAFQSHPTLEEVRLSQNGIR 198 (382)
T ss_pred HHHHHhccccceEEEeccccc
Confidence 13455567777777777664
No 32
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.08 E-value=9.5e-11 Score=108.13 Aligned_cols=106 Identities=26% Similarity=0.328 Sum_probs=25.2
Q ss_pred CCCCcCEEECCCCCCcccCCccccc-CCCCCcEEEccCcccccccChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCC
Q 046050 55 VLTSVKHLSMRNCYLYGTSDFQGLC-ELVHLQELHIGYNNIGGTLPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSL 133 (779)
Q Consensus 55 ~l~~L~~L~L~~n~l~~~~~~~~~~-~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L 133 (779)
+..++++|+|++|.|... +.++ .+.+|+.|++++|.|+.. +.+..+++|++|++++|+|+ .+.......+++|
T Consensus 17 n~~~~~~L~L~~n~I~~I---e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L 90 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI---ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNL 90 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-CHHHHHH-TT-
T ss_pred cccccccccccccccccc---cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC-ccccchHHhCCcC
Confidence 334556666666665422 1343 355666666666666532 23555666666666666666 5543112345666
Q ss_pred CEEEcccccccccCCcccccCCCCCcEEECcCC
Q 046050 134 EELRVSNNQFQIPISFEPFFNHSKLKKFYGQKN 166 (779)
Q Consensus 134 ~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~ 166 (779)
++|++++|+|...-....+..+++|+.|++.+|
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~N 123 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGN 123 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCC
Confidence 666666666653222233333444443333333
No 33
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=3.5e-11 Score=121.02 Aligned_cols=205 Identities=22% Similarity=0.279 Sum_probs=109.2
Q ss_pred CCCCCCcEEeCCCCcccc-------CCCCCccEEEccccccccc--cchhhcCCCCcCEEECCCCCCcccCCcccccCCC
Q 046050 12 TPFPNLETLELRDYHLEL-------LNFTNLEVLILDGSALHIR--FLQSIAVLTSVKHLSMRNCYLYGTSDFQGLCELV 82 (779)
Q Consensus 12 ~~~~~L~~L~Ls~~~~~~-------~~l~~L~~L~L~~~~~~~~--~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 82 (779)
++++.|+++.|..+.... ..+++++.|+|++|-++.. .......+++|+.|+++.|++.-......-..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 345566666666665532 2356666666666655432 2234455666666666666653222221222456
Q ss_pred CCcEEEccCcccccc-cChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCCCEEEcccccccccCCcccccCCCCCcEE
Q 046050 83 HLQELHIGYNNIGGT-LPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSLEELRVSNNQFQIPISFEPFFNHSKLKKF 161 (779)
Q Consensus 83 ~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 161 (779)
+|+.|.|+.|.++.. +......+|+|+.|+|..|... .+......-+..|++|||++|++...........++
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~-~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~----- 271 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEII-LIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLP----- 271 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhccccc-ceecchhhhhhHHhhccccCCccccccccccccccc-----
Confidence 666666666666542 2233455666666666666422 122213344556666666666554222222333344
Q ss_pred ECcCCceeeecccCCCCCCccccEEECCCCcCCCC-cchh-----hhCCCCCCEEEccCCCCCCcCch--hhhhcCCCCC
Q 046050 162 YGQKNRLFVEIESHSLTPKFQLQNISLSGCRCDFT-FPRF-----LYYQHELRYVDLSHMNLRGEFPN--WLLENNKELE 233 (779)
Q Consensus 162 ~l~~~~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~-~~~~-----l~~~~~L~~L~Ls~n~l~~~~~~--~~~~~~~~L~ 233 (779)
.|+.|+++.|.+... .|+. ...+++|++|+++.|++. .++. . ...+++|+
T Consensus 272 --------------------~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~-l~~l~nlk 329 (505)
T KOG3207|consen 272 --------------------GLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNH-LRTLENLK 329 (505)
T ss_pred --------------------chhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccch-hhccchhh
Confidence 455555555544332 2222 345678999999999885 3322 1 23456777
Q ss_pred EEECcCCcccc
Q 046050 234 TLLLANNSLSG 244 (779)
Q Consensus 234 ~L~L~~n~~~~ 244 (779)
.|.+..|.+..
T Consensus 330 ~l~~~~n~ln~ 340 (505)
T KOG3207|consen 330 HLRITLNYLNK 340 (505)
T ss_pred hhhcccccccc
Confidence 88877777764
No 34
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.05 E-value=4.8e-11 Score=113.90 Aligned_cols=132 Identities=30% Similarity=0.284 Sum_probs=105.3
Q ss_pred hcceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCCcCcccCCchhhhhccCCCCCC
Q 046050 447 DILVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHNNLSGTIPSCLYKTALGEGNYD 526 (779)
Q Consensus 447 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~~~ 526 (779)
..|+++|+++|.|+ .+.....-.|.++.|++++|.+.... .+..+++|+.||||+|.++. +..+.
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~--nLa~L~~L~~LDLS~N~Ls~-~~Gwh----------- 348 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQ--NLAELPQLQLLDLSGNLLAE-CVGWH----------- 348 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeeeh--hhhhcccceEeecccchhHh-hhhhH-----------
Confidence 34999999999998 55667778899999999999998443 37889999999999999972 22221
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEcCceeeecccccceeeEEeccCCccCCCCCccccCcccCcE
Q 046050 527 SAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTKNTSYYYQGRILKIMFGLDLSCNKLTGEIPFQIGYLNMIRA 606 (779)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~ 606 (779)
.-+-+.++|.|++|.+.. -..++.+.+|..
T Consensus 349 ------------------------------------------------~KLGNIKtL~La~N~iE~--LSGL~KLYSLvn 378 (490)
T KOG1259|consen 349 ------------------------------------------------LKLGNIKTLKLAQNKIET--LSGLRKLYSLVN 378 (490)
T ss_pred ------------------------------------------------hhhcCEeeeehhhhhHhh--hhhhHhhhhhee
Confidence 114578899999999873 245778899999
Q ss_pred EEcCCCcCCccC-chhhhCCCCCCEEECCCCcCcCCCch
Q 046050 607 LNLSHNNLMGTI-PSTFSHLSQIESLDLSYNMLQGKIPT 644 (779)
Q Consensus 607 L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~ 644 (779)
||+++|+|.... -..++++|.|+.+.|.+|++.+ +|+
T Consensus 379 LDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~-~vd 416 (490)
T KOG1259|consen 379 LDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG-SVD 416 (490)
T ss_pred ccccccchhhHHHhcccccccHHHHHhhcCCCccc-cch
Confidence 999999997443 2678999999999999999984 443
No 35
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.02 E-value=1.2e-10 Score=107.44 Aligned_cols=130 Identities=24% Similarity=0.323 Sum_probs=45.1
Q ss_pred cCCCCCccEEEccccccccccchhhc-CCCCcCEEECCCCCCcccCCcccccCCCCCcEEEccCcccccccChhc-cCCC
Q 046050 29 LLNFTNLEVLILDGSALHIRFLQSIA-VLTSVKHLSMRNCYLYGTSDFQGLCELVHLQELHIGYNNIGGTLPWCL-VNMT 106 (779)
Q Consensus 29 ~~~l~~L~~L~L~~~~~~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~-~~l~ 106 (779)
+.+..+++.|+|++|.|+.+ ..++ .+.+|+.|++++|.+... +.+..+++|++|++++|+|+.. .+.+ ..++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l---~~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp 88 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL---EGLPGLPRLKTLDLSNNRISSI-SEGLDKNLP 88 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S-----TT----TT--EEE--SS---S--CHHHHHH-T
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc---cCccChhhhhhcccCCCCCCcc-ccchHHhCC
Confidence 34455677788888877643 2344 467788888888877533 2567778888888888888743 3334 4578
Q ss_pred CCCEEeCCCCcCcccCCc-hhhcCCCCCCEEEcccccccccCC--cccccCCCCCcEEECcC
Q 046050 107 SLRILDIASNQITGNISS-SPLRYLTSLEELRVSNNQFQIPIS--FEPFFNHSKLKKFYGQK 165 (779)
Q Consensus 107 ~L~~L~Ls~n~i~~~i~~-~~~~~l~~L~~L~Ls~n~l~~~~~--~~~~~~l~~L~~L~l~~ 165 (779)
+|++|++++|+|. .+.. ..+..+++|++|++.+|.++..-. ...+..+|+|+.||...
T Consensus 89 ~L~~L~L~~N~I~-~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~~ 149 (175)
T PF14580_consen 89 NLQELYLSNNKIS-DLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQD 149 (175)
T ss_dssp T--EEE-TTS----SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTEE
T ss_pred cCCEEECcCCcCC-ChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCEE
Confidence 8888888888886 3332 246677888888888887763211 12345667777665543
No 36
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.02 E-value=3.6e-11 Score=117.74 Aligned_cols=196 Identities=21% Similarity=0.226 Sum_probs=95.1
Q ss_pred CCCCCEEEccCCcCCcccCccc-ccccCCccccEEEccCCcCCccccccccCCCCCCEEEccCCcCccccCccccCCCCC
Q 046050 278 LPRLEHFNISRNVLNGSIPCSL-HMTMGCFSLQILALSNNSLQGHIFSRSFNLTNLVTLQLDANQFTGGIPENLLNCSLL 356 (779)
Q Consensus 278 l~~L~~L~l~~n~l~~~~~~~~-~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 356 (779)
+|+|++++||+|.+....+..+ ....+|..|++|.+.+|.+....-..++. .|..|. .++ -...-+.|
T Consensus 91 ~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~L 159 (382)
T KOG1909|consen 91 CPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKL 159 (382)
T ss_pred CCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcce
Confidence 3466666666666654444444 33444556666666666554211111110 011110 000 01122345
Q ss_pred CEEEccCCccCCC----cchhhhCCCCCceEEccCCCCCCC----cchhhcCCCCCCEEEccCccCcccCC----cCcC-
Q 046050 357 GGLYLSDNHISGK----IPKWLGNLSNLVDIIMPNNHLEGP----IPANLCKLNFLTVLDLEVNNISGSLP----SCFS- 423 (779)
Q Consensus 357 ~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~- 423 (779)
+++...+|++... +...|...+.|+.+.+..|.|... ....|..+++|+.|||.+|.++.... ..+.
T Consensus 160 rv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s 239 (382)
T KOG1909|consen 160 RVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSS 239 (382)
T ss_pred EEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcc
Confidence 5555555544421 123344445555555555554421 22344555666666666665542211 1111
Q ss_pred CCcccEEEccCCcCcccchhhHhhc-------ceEEEccCccccC----cCchhhhcCCCCcEEEccCCcCc
Q 046050 424 SWLLTQVHLSRNKIEGQLEDVFGDI-------LVTLDLSYNRFSG----RIPNWIDKLSHLSYLILANNNLE 484 (779)
Q Consensus 424 ~~~L~~L~l~~n~l~~~~~~~~~~~-------L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~ 484 (779)
.++|+.+++++|.+.......+... |++|.+.+|.|+. .+...+...+.|..|+|++|++.
T Consensus 240 ~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 240 WPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 3346666666666655444443321 6777777777652 12234455788888999999883
No 37
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.89 E-value=8e-10 Score=83.70 Aligned_cols=59 Identities=36% Similarity=0.533 Sum_probs=30.4
Q ss_pred cCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEccCCc
Q 046050 603 MIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVAHNN 661 (779)
Q Consensus 603 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~ 661 (779)
+|++|++++|+++...++.|.++++|++|++++|+++...|.+|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34555555555554444455555555555555555554444455555555555555554
No 38
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.89 E-value=1.3e-10 Score=125.99 Aligned_cols=246 Identities=28% Similarity=0.249 Sum_probs=124.9
Q ss_pred CCCCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCCCCCceEEccCCCCCCCcchhhcCCCCCCEE
Q 046050 328 NLTNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNLSNLVDIIMPNNHLEGPIPANLCKLNFLTVL 407 (779)
Q Consensus 328 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 407 (779)
.+..++.+.++.|.+.. +...+..+++|+.+++.+|+|... ...+..+++|++|++++|.|+...+ +..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccccc--hhhccchhhh
Confidence 44555666666666652 223355556666666666666632 2224455566666666666553322 3344445555
Q ss_pred EccCccCcccCCcCcCCCcccEEEccCCcCcccchhhHhhcceEEEccCccccCcCc-hhhhcCCCCcEEEccCCcCccc
Q 046050 408 DLEVNNISGSLPSCFSSWLLTQVHLSRNKIEGQLEDVFGDILVTLDLSYNRFSGRIP-NWIDKLSHLSYLILANNNLEGE 486 (779)
Q Consensus 408 ~L~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~ 486 (779)
++++|.++. +...-.+.. ++.+++++|.+...-+ . ...+.+++.+.+.+|.+...
T Consensus 146 ~l~~N~i~~-~~~~~~l~~----------------------L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i 201 (414)
T KOG0531|consen 146 NLSGNLISD-ISGLESLKS----------------------LKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI 201 (414)
T ss_pred eeccCcchh-ccCCccchh----------------------hhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc
Confidence 555555542 222111333 4444444444442211 1 34455555555555555421
Q ss_pred CcccccCCCCCCEEEccCCcCcccCCchhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCcccceEEEEEc
Q 046050 487 VPVQLCLLKQLQLIDLSHNNLSGTIPSCLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMRKEESVEFRTK 566 (779)
Q Consensus 487 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (779)
..+..+..+..+++..|.++..-+...
T Consensus 202 --~~~~~~~~l~~~~l~~n~i~~~~~l~~--------------------------------------------------- 228 (414)
T KOG0531|consen 202 --EGLDLLKKLVLLSLLDNKISKLEGLNE--------------------------------------------------- 228 (414)
T ss_pred --cchHHHHHHHHhhcccccceeccCccc---------------------------------------------------
Confidence 222333333444555555542111000
Q ss_pred Cceeeecccccc--eeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCC---
Q 046050 567 NTSYYYQGRILK--IMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGK--- 641 (779)
Q Consensus 567 ~~~~~~~~~~l~--~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--- 641 (779)
+. .|+.+++++|.+. .++..+..+..+..|++++|++...- .+...+.+..+.++.|.+...
T Consensus 229 ----------~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 295 (414)
T KOG0531|consen 229 ----------LVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLALSEAI 295 (414)
T ss_pred ----------chhHHHHHHhcccCccc-cccccccccccccccchhhccccccc--cccccchHHHhccCcchhcchhhh
Confidence 11 2566777777776 44455666777777777777776322 244566666777777766521
Q ss_pred Cchh-hhhcccCcEEEccCCcCcccCC
Q 046050 642 IPTQ-LVELYALAIFSVAHNNLSGKVP 667 (779)
Q Consensus 642 ~p~~-l~~l~~L~~L~ls~N~l~~~~p 667 (779)
.... ....+.++...+.+|+.....+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 296 SQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred hccccccccccccccccccCccccccc
Confidence 1111 3445677777777777765544
No 39
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.86 E-value=2.7e-10 Score=123.53 Aligned_cols=221 Identities=27% Similarity=0.198 Sum_probs=133.9
Q ss_pred hcCCCCCCEEEccCccCcccCCcCcCCCcccEEEccCCcCcccchhhHhhcceEEEccCccccCcCchhhhcCCCCcEEE
Q 046050 398 LCKLNFLTVLDLEVNNISGSLPSCFSSWLLTQVHLSRNKIEGQLEDVFGDILVTLDLSYNRFSGRIPNWIDKLSHLSYLI 477 (779)
Q Consensus 398 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 477 (779)
+..+.+|+.+++.+|+|..+....-.+.+|++|++++|.|+.+.+-.....|+.|++++|.|... ..+..+++|+.++
T Consensus 91 l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~ 168 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLD 168 (414)
T ss_pred cccccceeeeeccccchhhcccchhhhhcchheeccccccccccchhhccchhhheeccCcchhc--cCCccchhhhccc
Confidence 34444555555555555433222222445555555555555544433333377777777777633 3455588899999
Q ss_pred ccCCcCcccCc-ccccCCCCCCEEEccCCcCcccCCchhhhhccCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCc
Q 046050 478 LANNNLEGEVP-VQLCLLKQLQLIDLSHNNLSGTIPSCLYKTALGEGNYDSAAPTSEGNYGASSPAAGEAVSPSGSSTMR 556 (779)
Q Consensus 478 L~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (779)
+++|++....+ . ...+.+++.+++.+|.+...-....
T Consensus 169 l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~~~~----------------------------------------- 206 (414)
T KOG0531|consen 169 LSYNRIVDIENDE-LSELISLEELDLGGNSIREIEGLDL----------------------------------------- 206 (414)
T ss_pred CCcchhhhhhhhh-hhhccchHHHhccCCchhcccchHH-----------------------------------------
Confidence 99999885544 2 5677888889999998862211111
Q ss_pred ccceEEEEEcCceeeecccccceeeEEeccCCccCCCCCccccCcc--cCcEEEcCCCcCCccCchhhhCCCCCCEEECC
Q 046050 557 KEESVEFRTKNTSYYYQGRILKIMFGLDLSCNKLTGEIPFQIGYLN--MIRALNLSHNNLMGTIPSTFSHLSQIESLDLS 634 (779)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 634 (779)
+..+..+++..|.++...+ +..+. .|+.+++++|++. ..+..+..+..+..|+++
T Consensus 207 --------------------~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~ 263 (414)
T KOG0531|consen 207 --------------------LKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLS 263 (414)
T ss_pred --------------------HHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchh
Confidence 2234445778888773322 22233 3899999999998 455677888999999999
Q ss_pred CCcCcCCCchhhhhcccCcEEEccCCcCccc---CCCC-CCcCCCCCCCcccCCCCC
Q 046050 635 YNMLQGKIPTQLVELYALAIFSVAHNNLSGK---VPDR-VGQFATFTENSYDGNSLL 687 (779)
Q Consensus 635 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~---~p~~-~~~~~~l~~~~~~~N~~l 687 (779)
+|++...- .+...+.+..+....|++... .... .....++....+.+||..
T Consensus 264 ~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (414)
T KOG0531|consen 264 SNRISNLE--GLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIR 318 (414)
T ss_pred hccccccc--cccccchHHHhccCcchhcchhhhhccccccccccccccccccCccc
Confidence 99987433 345566777888888876522 1110 123344455555555543
No 40
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.86 E-value=1.6e-09 Score=81.98 Aligned_cols=61 Identities=43% Similarity=0.497 Sum_probs=56.9
Q ss_pred ceeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcC
Q 046050 578 KIMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNML 638 (779)
Q Consensus 578 ~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 638 (779)
++|++|++++|+++...+..|.++++|++|++++|+++...|+.|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4688999999999977778999999999999999999988889999999999999999986
No 41
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.78 E-value=5.4e-09 Score=120.99 Aligned_cols=125 Identities=22% Similarity=0.242 Sum_probs=78.3
Q ss_pred CCCcEEeCCCCccc----cCCCCCccEEEccccc--cccccchhhcCCCCcCEEECCCCCCcccCCcccccCCCCCcEEE
Q 046050 15 PNLETLELRDYHLE----LLNFTNLEVLILDGSA--LHIRFLQSIAVLTSVKHLSMRNCYLYGTSDFQGLCELVHLQELH 88 (779)
Q Consensus 15 ~~L~~L~Ls~~~~~----~~~l~~L~~L~L~~~~--~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~ 88 (779)
...+.+.+-+|.+. -...+.|++|-+..|. +.......|..++.|++|||++|.-.+.+| ..++++.+||+|+
T Consensus 523 ~~~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP-~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLP-SSIGELVHLRYLD 601 (889)
T ss_pred hheeEEEEeccchhhccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCC-hHHhhhhhhhccc
Confidence 34455555555542 2234467777777665 333444456667777777777665445566 3677777777777
Q ss_pred ccCcccccccChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCCCEEEccccc
Q 046050 89 IGYNNIGGTLPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSLEELRVSNNQ 142 (779)
Q Consensus 89 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L~~L~Ls~n~ 142 (779)
++++.+. .+|..++++..|.+||+..+.-...+|. ....+++|++|.+....
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~-i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPG-ILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccc-hhhhcccccEEEeeccc
Confidence 7777776 6777777777777777777665433333 45557777777766544
No 42
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.72 E-value=3.1e-09 Score=101.78 Aligned_cols=215 Identities=16% Similarity=0.182 Sum_probs=129.2
Q ss_pred cCCCCcCEEECCCCCCcccCCccccc-CCCCCcEEEccCccccc--ccChhccCCCCCCEEeCCCCcCcccCCchhh-cC
Q 046050 54 AVLTSVKHLSMRNCYLYGTSDFQGLC-ELVHLQELHIGYNNIGG--TLPWCLVNMTSLRILDIASNQITGNISSSPL-RY 129 (779)
Q Consensus 54 ~~l~~L~~L~L~~n~l~~~~~~~~~~-~l~~L~~L~Ls~n~i~~--~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~-~~ 129 (779)
.....++.|.+.++.+...-....++ .+++++++||.+|.|+. .+...+.++|.|++|+|+.|++...|.. . ..
T Consensus 42 ~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~--lp~p 119 (418)
T KOG2982|consen 42 SSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKS--LPLP 119 (418)
T ss_pred ccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCcccc--Cccc
Confidence 33445567777777775443333444 47889999999999874 3445578899999999999998744433 2 35
Q ss_pred CCCCCEEEcccccccccCCcccccCCCCCcEEECcCCceeeecccCCCCCCccccEEECCCCcCCCCcchhhhCCCCCCE
Q 046050 130 LTSLEELRVSNNQFQIPISFEPFFNHSKLKKFYGQKNRLFVEIESHSLTPKFQLQNISLSGCRCDFTFPRFLYYQHELRY 209 (779)
Q Consensus 130 l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~L~~ 209 (779)
+.+|++|-|.+..+...-....+..+++++.|.++.|. ++.+++..+.+... .+.+++
T Consensus 120 ~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~---------------~rq~n~Dd~c~e~~-------s~~v~t 177 (418)
T KOG2982|consen 120 LKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNS---------------LRQLNLDDNCIEDW-------STEVLT 177 (418)
T ss_pred ccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccch---------------hhhhcccccccccc-------chhhhh
Confidence 67899999888877644444556777888888777773 33333333332211 122333
Q ss_pred EEccCCCCCC--cCchhhhhcCCCCCEEECcCCcccccC-CCCCCCCCCccEEEccCCCCCcCCchhhhhcCCCCCEEEc
Q 046050 210 VDLSHMNLRG--EFPNWLLENNKELETLLLANNSLSGFF-QMPVNPLKQLTTIDVSKNFIQGHIPTGIGAFLPRLEHFNI 286 (779)
Q Consensus 210 L~Ls~n~l~~--~~~~~~~~~~~~L~~L~L~~n~~~~~~-~~~l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~l 286 (779)
|....|.... .+ ..+.+-+|++..+.+..|.+.... ...+..++.+.-|+|+.|+|...-.-.....+++|..|.+
T Consensus 178 lh~~~c~~~~w~~~-~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv 256 (418)
T KOG2982|consen 178 LHQLPCLEQLWLNK-NKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRV 256 (418)
T ss_pred hhcCCcHHHHHHHH-HhHHhhcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeec
Confidence 4433332110 00 001133466777777777665432 2345566777778888887763322223334677778888
Q ss_pred cCCcCCc
Q 046050 287 SRNVLNG 293 (779)
Q Consensus 287 ~~n~l~~ 293 (779)
+++++..
T Consensus 257 ~~~Pl~d 263 (418)
T KOG2982|consen 257 SENPLSD 263 (418)
T ss_pred cCCcccc
Confidence 7777663
No 43
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.69 E-value=1.9e-08 Score=116.54 Aligned_cols=128 Identities=17% Similarity=0.131 Sum_probs=90.6
Q ss_pred CCCCCccEEEccccccccccchhhcCCCCcCEEECCCCC--CcccCCcccccCCCCCcEEEccCcccccccChhccCCCC
Q 046050 30 LNFTNLEVLILDGSALHIRFLQSIAVLTSVKHLSMRNCY--LYGTSDFQGLCELVHLQELHIGYNNIGGTLPWCLVNMTS 107 (779)
Q Consensus 30 ~~l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~n~--l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 107 (779)
.+....|...+.++.+.. .+.+. .++.|++|-+..|. + ...+.+.|..++.|++|||++|.=-+.+|..++.+-+
T Consensus 520 ~~~~~~rr~s~~~~~~~~-~~~~~-~~~~L~tLll~~n~~~l-~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~ 596 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIEH-IAGSS-ENPKLRTLLLQRNSDWL-LEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVH 596 (889)
T ss_pred cchhheeEEEEeccchhh-ccCCC-CCCccceEEEeecchhh-hhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhh
Confidence 345667777777777653 23322 23478888888886 3 3444445778999999999988666689999999999
Q ss_pred CCEEeCCCCcCcccCCchhhcCCCCCCEEEcccccccccCCcccccCCCCCcEEEC
Q 046050 108 LRILDIASNQITGNISSSPLRYLTSLEELRVSNNQFQIPISFEPFFNHSKLKKFYG 163 (779)
Q Consensus 108 L~~L~Ls~n~i~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l 163 (779)
||+|++++..++ .+|. .+++++.|.+|++..+.-...+ ......+.+|++|.+
T Consensus 597 LryL~L~~t~I~-~LP~-~l~~Lk~L~~Lnl~~~~~l~~~-~~i~~~L~~Lr~L~l 649 (889)
T KOG4658|consen 597 LRYLDLSDTGIS-HLPS-GLGNLKKLIYLNLEVTGRLESI-PGILLELQSLRVLRL 649 (889)
T ss_pred hhcccccCCCcc-ccch-HHHHHHhhheeccccccccccc-cchhhhcccccEEEe
Confidence 999999999998 8888 7889999999998887643222 223333555555544
No 44
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.63 E-value=6.6e-10 Score=118.41 Aligned_cols=149 Identities=25% Similarity=0.379 Sum_probs=73.4
Q ss_pred CCCCCCcEEeCCCCccc----cCC---------------------------------CCCccEEEccccccccccchhhc
Q 046050 12 TPFPNLETLELRDYHLE----LLN---------------------------------FTNLEVLILDGSALHIRFLQSIA 54 (779)
Q Consensus 12 ~~~~~L~~L~Ls~~~~~----~~~---------------------------------l~~L~~L~L~~~~~~~~~~~~~~ 54 (779)
..|.+||+|.|+++.+. +.. +-.|.+.+.+.|++. ....++.
T Consensus 106 fpF~sLr~LElrg~~L~~~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-~mD~SLq 184 (1096)
T KOG1859|consen 106 FPFRSLRVLELRGCDLSTAKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-LMDESLQ 184 (1096)
T ss_pred ccccceeeEEecCcchhhhhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-hHHHHHH
Confidence 47899999999999972 111 112333333344333 2233344
Q ss_pred CCCCcCEEECCCCCCcccCCcccccCCCCCcEEEccCcccccccChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCCC
Q 046050 55 VLTSVKHLSMRNCYLYGTSDFQGLCELVHLQELHIGYNNIGGTLPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSLE 134 (779)
Q Consensus 55 ~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L~ 134 (779)
-+++|+.|+|++|++... +.+..|++|++|||++|.+.....-....++ |+.|.+++|.++ ++-. +.++++|+
T Consensus 185 ll~ale~LnLshNk~~~v---~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~-tL~g--ie~LksL~ 257 (1096)
T KOG1859|consen 185 LLPALESLNLSHNKFTKV---DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALT-TLRG--IENLKSLY 257 (1096)
T ss_pred HHHHhhhhccchhhhhhh---HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHH-hhhh--HHhhhhhh
Confidence 445555555555555322 2344555555555555555522222233333 555555555555 3332 44555555
Q ss_pred EEEcccccccccCCcccccCCCCCcEEECcCCce
Q 046050 135 ELRVSNNQFQIPISFEPFFNHSKLKKFYGQKNRL 168 (779)
Q Consensus 135 ~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~~l 168 (779)
.||+++|-+.+--....+..+..|+.|++.+|.+
T Consensus 258 ~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 258 GLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred ccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 5555555544332233334444455555555443
No 45
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.59 E-value=2.9e-09 Score=102.03 Aligned_cols=222 Identities=19% Similarity=0.159 Sum_probs=136.3
Q ss_pred cEEEccccccccccchhhcCC--CCcCEEECCCCCCcccCCcccccC-CCCCcEEEccCccccc-ccChhccCCCCCCEE
Q 046050 36 EVLILDGSALHIRFLQSIAVL--TSVKHLSMRNCYLYGTSDFQGLCE-LVHLQELHIGYNNIGG-TLPWCLVNMTSLRIL 111 (779)
Q Consensus 36 ~~L~L~~~~~~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~~-l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L 111 (779)
+.+|+.+-.++ |++++.+ +.+..+.+....+....-.+.+.- -+.|++||||...|+. .+-..++.|.+|+.|
T Consensus 139 ~~lDl~~r~i~---p~~l~~l~~rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk~l 215 (419)
T KOG2120|consen 139 QTLDLTGRNIH---PDVLGRLLSRGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLKNL 215 (419)
T ss_pred eeeccCCCccC---hhHHHHHHhCCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhhhc
Confidence 45677776654 3443333 355556665443322211111111 2459999999998875 234456889999999
Q ss_pred eCCCCcCcccCCchhhcCCCCCCEEEccccc-ccccCCcccccCCCCCcEEECcCCceeeecccCCCCC-CccccEEECC
Q 046050 112 DIASNQITGNISSSPLRYLTSLEELRVSNNQ-FQIPISFEPFFNHSKLKKFYGQKNRLFVEIESHSLTP-KFQLQNISLS 189 (779)
Q Consensus 112 ~Ls~n~i~~~i~~~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~-~~~L~~L~L~ 189 (779)
.|.++++.+.|-. .+++-.+|+.|+++.+. ++.......+.+++.|..|+++++.++.......... -.+|+.|+++
T Consensus 216 SlEg~~LdD~I~~-~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNls 294 (419)
T KOG2120|consen 216 SLEGLRLDDPIVN-TIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLS 294 (419)
T ss_pred cccccccCcHHHH-HHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhh
Confidence 9999999876666 68888999999999753 4422222356788888888888888766554333222 2378888888
Q ss_pred CCcCC---CCcchhhhCCCCCCEEEccCCC-CCCcCchhhhhcCCCCCEEECcCCcccccCCC---CCCCCCCccEEEcc
Q 046050 190 GCRCD---FTFPRFLYYQHELRYVDLSHMN-LRGEFPNWLLENNKELETLLLANNSLSGFFQM---PVNPLKQLTTIDVS 262 (779)
Q Consensus 190 ~n~~~---~~~~~~l~~~~~L~~L~Ls~n~-l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~---~l~~l~~L~~L~Ls 262 (779)
++.-. ..+......+++|.+||||++. ++......+ -+++.|++|.++.|.. +.|. .+...+.|.+||+.
T Consensus 295 G~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~-~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~ 371 (419)
T KOG2120|consen 295 GYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF-FKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVF 371 (419)
T ss_pred hhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHH-HhcchheeeehhhhcC--CChHHeeeeccCcceEEEEec
Confidence 77321 1223334567788888887764 332222222 3567777777777752 2232 34566777777776
Q ss_pred CC
Q 046050 263 KN 264 (779)
Q Consensus 263 ~n 264 (779)
++
T Consensus 372 g~ 373 (419)
T KOG2120|consen 372 GC 373 (419)
T ss_pred cc
Confidence 54
No 46
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.56 E-value=2.8e-09 Score=113.75 Aligned_cols=57 Identities=33% Similarity=0.389 Sum_probs=37.5
Q ss_pred ceEEEccCccccCcCchhhhcCCCCcEEEccCCcCcccCcccccCCCCCCEEEccCCcCc
Q 046050 449 LVTLDLSYNRFSGRIPNWIDKLSHLSYLILANNNLEGEVPVQLCLLKQLQLIDLSHNNLS 508 (779)
Q Consensus 449 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 508 (779)
|.+.+.++|.+. .....+.-++.|+.|+|++|+++... .+..++.|++|||++|.+.
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~ 222 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR 222 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc
Confidence 666666777766 44455666677777777777776432 5566677777777777765
No 47
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.52 E-value=9.2e-09 Score=87.14 Aligned_cols=89 Identities=21% Similarity=0.333 Sum_probs=64.5
Q ss_pred ceeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEc
Q 046050 578 KIMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSV 657 (779)
Q Consensus 578 ~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 657 (779)
+..+.|+|++|+|. .+|.+++.++.|+.|+++.|.+. ..|..+..|.++..||..+|.+. .+|..+-.-+.....++
T Consensus 77 ~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~l 153 (177)
T KOG4579|consen 77 PTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKL 153 (177)
T ss_pred chhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHh
Confidence 45667888888888 77777888888888888888887 67777777888888888888887 55554433344444556
Q ss_pred cCCcCcccCCCC
Q 046050 658 AHNNLSGKVPDR 669 (779)
Q Consensus 658 s~N~l~~~~p~~ 669 (779)
.++++.+.+|..
T Consensus 154 gnepl~~~~~~k 165 (177)
T KOG4579|consen 154 GNEPLGDETKKK 165 (177)
T ss_pred cCCcccccCccc
Confidence 777777777763
No 48
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.47 E-value=5.3e-09 Score=100.22 Aligned_cols=178 Identities=21% Similarity=0.175 Sum_probs=96.4
Q ss_pred CCCEEEccCCCCCCcCchhhhhcCCCCCEEECcCCcccccCCCCCCCCCCccEEEccCC-CCCcCCchhhhhcCCCCCEE
Q 046050 206 ELRYVDLSHMNLRGEFPNWLLENNKELETLLLANNSLSGFFQMPVNPLKQLTTIDVSKN-FIQGHIPTGIGAFLPRLEHF 284 (779)
Q Consensus 206 ~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n-~l~~~i~~~~~~~l~~L~~L 284 (779)
.|+++|||+..++..--..++..|.+|+.|.+.++++.+.+...+..-..|+.|+++.+ .++..-..-++..+..|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 46677777766664444455566677777777777776655556666667777777765 23311122334446677777
Q ss_pred EccCCcCCcccCccc--ccccCCccccEEEccCCc--CC-ccccccccCCCCCCEEEccCCc-CccccCccccCCCCCCE
Q 046050 285 NISRNVLNGSIPCSL--HMTMGCFSLQILALSNNS--LQ-GHIFSRSFNLTNLVTLQLDANQ-FTGGIPENLLNCSLLGG 358 (779)
Q Consensus 285 ~l~~n~l~~~~~~~~--~~~~~~~~L~~L~ls~n~--l~-~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~ 358 (779)
+++.|.+.......+ +... +|+.|+++++. +. ..+..-...+++|.+||+++|. ++......|.+++.|++
T Consensus 266 NlsWc~l~~~~Vtv~V~hise---~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~ 342 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISE---TLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQH 342 (419)
T ss_pred CchHhhccchhhhHHHhhhch---hhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchhee
Confidence 777776653332221 2222 56666666652 11 1111222356666666666653 22222234455666666
Q ss_pred EEccCCccCCCcchh---hhCCCCCceEEccCC
Q 046050 359 LYLSDNHISGKIPKW---LGNLSNLVDIIMPNN 388 (779)
Q Consensus 359 L~L~~n~i~~~~~~~---~~~l~~L~~L~L~~n 388 (779)
|.++.|.. ++|.. +...++|.+|++.++
T Consensus 343 lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 343 LSLSRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred eehhhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 66666653 23332 334555666665554
No 49
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.34 E-value=1.5e-07 Score=89.30 Aligned_cols=166 Identities=16% Similarity=0.215 Sum_probs=108.2
Q ss_pred ccccchhhhhCCCCCCcEEeCCCCccc----------cCCCCCccEEEcccccc---ccc-------cchhhcCCCCcCE
Q 046050 2 NVSSLLQSLWTPFPNLETLELRDYHLE----------LLNFTNLEVLILDGSAL---HIR-------FLQSIAVLTSVKH 61 (779)
Q Consensus 2 ~~~~~~~~~~~~~~~L~~L~Ls~~~~~----------~~~l~~L~~L~L~~~~~---~~~-------~~~~~~~l~~L~~ 61 (779)
+++.++..+.+ ...+.++|||+|.++ +.+-++|++.+++.--. ... +.+++.+|++|+.
T Consensus 18 Dvk~v~eel~~-~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~ 96 (388)
T COG5238 18 DVKGVVEELEM-MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQK 96 (388)
T ss_pred hhhHHHHHHHh-hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCccee
Confidence 35556666655 888999999999983 56677888888876321 111 2356778899999
Q ss_pred EECCCCCCcccCCc---ccccCCCCCcEEEccCcccccc----cCh---------hccCCCCCCEEeCCCCcCcccCCch
Q 046050 62 LSMRNCYLYGTSDF---QGLCELVHLQELHIGYNNIGGT----LPW---------CLVNMTSLRILDIASNQITGNISSS 125 (779)
Q Consensus 62 L~L~~n~l~~~~~~---~~~~~l~~L~~L~Ls~n~i~~~----~~~---------~~~~l~~L~~L~Ls~n~i~~~i~~~ 125 (779)
++||.|.+....+. +.+++-+.|.+|.+++|.+.-+ +.. -..+-|.|++.+...|++. ..+..
T Consensus 97 v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRle-ngs~~ 175 (388)
T COG5238 97 VDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLE-NGSKE 175 (388)
T ss_pred eeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhc-cCcHH
Confidence 99999988544442 2355678899999998876422 111 1234578888888888876 44331
Q ss_pred ----hhcCCCCCCEEEccccccccc----CCcccccCCCCCcEEECcCCcee
Q 046050 126 ----PLRYLTSLEELRVSNNQFQIP----ISFEPFFNHSKLKKFYGQKNRLF 169 (779)
Q Consensus 126 ----~~~~l~~L~~L~Ls~n~l~~~----~~~~~~~~l~~L~~L~l~~~~l~ 169 (779)
.+..-.+|+++.+..|.|... .....+..+.+|+.|++..|.++
T Consensus 176 ~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft 227 (388)
T COG5238 176 LSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFT 227 (388)
T ss_pred HHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchh
Confidence 122236788888888887621 11123455667777777776653
No 50
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.12 E-value=6.7e-07 Score=86.11 Aligned_cols=205 Identities=15% Similarity=0.089 Sum_probs=110.0
Q ss_pred CCCCccEEEcccccccc--ccchhhcCCCCcCEEECCCCCCcccCCcccc-cCCCCCcEEEccCcccccc-cChhccCCC
Q 046050 31 NFTNLEVLILDGSALHI--RFLQSIAVLTSVKHLSMRNCYLYGTSDFQGL-CELVHLQELHIGYNNIGGT-LPWCLVNMT 106 (779)
Q Consensus 31 ~l~~L~~L~L~~~~~~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~~l~~L~~L~Ls~n~i~~~-~~~~~~~l~ 106 (779)
..++++.++|.+|.++. .+...+.++++|++|++++|.+...+. .+ ..+.+|++|-|.+..+.-. ....+..+|
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~--~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP 146 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIK--SLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLP 146 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccc--cCcccccceEEEEEcCCCCChhhhhhhhhcch
Confidence 35677778888877664 223445677788888888887753332 22 2456777777777766543 233456677
Q ss_pred CCCEEeCCCCcCcc-cCCchhhcC-CCCCCEEEcccccccccCCc-ccccCCCCCcEEECcCCceeeecccCCCCCCccc
Q 046050 107 SLRILDIASNQITG-NISSSPLRY-LTSLEELRVSNNQFQIPISF-EPFFNHSKLKKFYGQKNRLFVEIESHSLTPKFQL 183 (779)
Q Consensus 107 ~L~~L~Ls~n~i~~-~i~~~~~~~-l~~L~~L~Ls~n~l~~~~~~-~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~L 183 (779)
.++.|.+|.|.+.- .+..+.... -+.+++|.+-.|...--... ..-.-++++..+.+..+.+........+.+++.+
T Consensus 147 ~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~ 226 (418)
T KOG2982|consen 147 KVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSL 226 (418)
T ss_pred hhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcc
Confidence 77777777774320 011111111 12333333333322100000 0112235555555666655444444444555566
Q ss_pred cEEECCCCcCCCC-cchhhhCCCCCCEEEccCCCCCCcCch-----hhhhcCCCCCEEEC
Q 046050 184 QNISLSGCRCDFT-FPRFLYYQHELRYVDLSHMNLRGEFPN-----WLLENNKELETLLL 237 (779)
Q Consensus 184 ~~L~L~~n~~~~~-~~~~l~~~~~L~~L~Ls~n~l~~~~~~-----~~~~~~~~L~~L~L 237 (779)
.-|+|+.+++... ..+.+..++.|..|.++++.+...+.. -+.+.+++++.|+=
T Consensus 227 ~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLNG 286 (418)
T KOG2982|consen 227 SCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLNG 286 (418)
T ss_pred hhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEecC
Confidence 6777777777643 335677778888888888876643321 12245666766643
No 51
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.00 E-value=2e-06 Score=81.83 Aligned_cols=162 Identities=22% Similarity=0.203 Sum_probs=86.8
Q ss_pred cccCCCCCCEEEccCCccCCCcch----hhhCCCCCceEEccCCCCCCCcchh-------------hcCCCCCCEEEccC
Q 046050 349 NLLNCSLLGGLYLSDNHISGKIPK----WLGNLSNLVDIIMPNNHLEGPIPAN-------------LCKLNFLTVLDLEV 411 (779)
Q Consensus 349 ~~~~l~~L~~L~L~~n~i~~~~~~----~~~~l~~L~~L~L~~n~l~~~~~~~-------------~~~l~~L~~L~L~~ 411 (779)
++.+|+.|+.++||+|.+....|+ .+..-+.|.+|.+++|.+....... ..+-|.|+..+...
T Consensus 87 aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgr 166 (388)
T COG5238 87 ALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGR 166 (388)
T ss_pred HHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEecc
Confidence 345566666666666666654443 2344566777777777654221111 12456677777777
Q ss_pred ccCcccCCcCc----C-CCcccEEEccCCcCcccchhh--Hh-----hcceEEEccCccccCcCc----hhhhcCCCCcE
Q 046050 412 NNISGSLPSCF----S-SWLLTQVHLSRNKIEGQLEDV--FG-----DILVTLDLSYNRFSGRIP----NWIDKLSHLSY 475 (779)
Q Consensus 412 n~l~~~~~~~~----~-~~~L~~L~l~~n~l~~~~~~~--~~-----~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~ 475 (779)
|++..-....+ . -..|+++.+..|.|....... +. ..|+.||+..|-++-... ..+...+.|+.
T Consensus 167 NRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrE 246 (388)
T COG5238 167 NRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRE 246 (388)
T ss_pred chhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhh
Confidence 77652221111 1 125677777777665432221 11 127777777776653222 23334556777
Q ss_pred EEccCCcCcccCcccc------cCCCCCCEEEccCCcCccc
Q 046050 476 LILANNNLEGEVPVQL------CLLKQLQLIDLSHNNLSGT 510 (779)
Q Consensus 476 L~L~~n~l~~~~~~~~------~~l~~L~~L~Ls~N~l~~~ 510 (779)
|.+.+|-++..-...+ ...++|+.|-..+|...+.
T Consensus 247 L~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~ 287 (388)
T COG5238 247 LRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGG 287 (388)
T ss_pred ccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCc
Confidence 7777776654332221 1246677777777766543
No 52
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.00 E-value=5.8e-06 Score=57.02 Aligned_cols=36 Identities=33% Similarity=0.610 Sum_probs=19.4
Q ss_pred cCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCc
Q 046050 603 MIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQ 639 (779)
Q Consensus 603 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 639 (779)
+|++|++++|+|+ .+|..++++++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555666666665 34445556666666666666555
No 53
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.95 E-value=7.5e-06 Score=56.45 Aligned_cols=36 Identities=36% Similarity=0.576 Sum_probs=20.2
Q ss_pred CCcEEEccCcccccccChhccCCCCCCEEeCCCCcCc
Q 046050 83 HLQELHIGYNNIGGTLPWCLVNMTSLRILDIASNQIT 119 (779)
Q Consensus 83 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~ 119 (779)
+|++|++++|+|+ .+|..+++|++|++|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 5566666666666 34444666666666666666665
No 54
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.90 E-value=3.1e-06 Score=95.86 Aligned_cols=159 Identities=21% Similarity=0.273 Sum_probs=86.1
Q ss_pred CCcCEEECCCCCCcccCCcccccC-CCCCcEEEccCcccccc-cChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCCC
Q 046050 57 TSVKHLSMRNCYLYGTSDFQGLCE-LVHLQELHIGYNNIGGT-LPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSLE 134 (779)
Q Consensus 57 ~~L~~L~L~~n~l~~~~~~~~~~~-l~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L~ 134 (779)
.+|++|++++......-....++. +|.|+.|.+++-.+... ......++|+|..||+|+.+++ .+. .++.+++|+
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~-nl~--GIS~LknLq 198 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNIS-NLS--GISRLKNLQ 198 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCcc-CcH--HHhccccHH
Confidence 567777777754422211123443 67777777776655432 1233456777777777777777 552 467777777
Q ss_pred EEEcccccccccCCcccccCCCCCcEEECcCCceeeecccCCCCCCccccEEECCCCcCCCCcchhhhCCCCCCEEEccC
Q 046050 135 ELRVSNNQFQIPISFEPFFNHSKLKKFYGQKNRLFVEIESHSLTPKFQLQNISLSGCRCDFTFPRFLYYQHELRYVDLSH 214 (779)
Q Consensus 135 ~L~Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~L~~L~Ls~ 214 (779)
+|.+.+-.+...-....+.++++|++||++........ .+.....+.-..+|+|+.||.|+
T Consensus 199 ~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~-------------------~ii~qYlec~~~LpeLrfLDcSg 259 (699)
T KOG3665|consen 199 VLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDT-------------------KIIEQYLECGMVLPELRFLDCSG 259 (699)
T ss_pred HHhccCCCCCchhhHHHHhcccCCCeeeccccccccch-------------------HHHHHHHHhcccCccccEEecCC
Confidence 77666655442111223444555555554443211000 00001112223467888888888
Q ss_pred CCCCCcCchhhhhcCCCCCEEEC
Q 046050 215 MNLRGEFPNWLLENNKELETLLL 237 (779)
Q Consensus 215 n~l~~~~~~~~~~~~~~L~~L~L 237 (779)
+.+.+.+-+.+...-++|+.+..
T Consensus 260 Tdi~~~~le~ll~sH~~L~~i~~ 282 (699)
T KOG3665|consen 260 TDINEEILEELLNSHPNLQQIAA 282 (699)
T ss_pred cchhHHHHHHHHHhCccHhhhhh
Confidence 87776666655555556655443
No 55
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.89 E-value=5.1e-07 Score=91.16 Aligned_cols=85 Identities=22% Similarity=0.191 Sum_probs=45.5
Q ss_pred CcCEEECCCCCCcccCCcccc-cCCCCCcEEEccCcc-cccccChhc-cCCCCCCEEeCCCCc-CcccCCchhhcCCCCC
Q 046050 58 SVKHLSMRNCYLYGTSDFQGL-CELVHLQELHIGYNN-IGGTLPWCL-VNMTSLRILDIASNQ-ITGNISSSPLRYLTSL 133 (779)
Q Consensus 58 ~L~~L~L~~n~l~~~~~~~~~-~~l~~L~~L~Ls~n~-i~~~~~~~~-~~l~~L~~L~Ls~n~-i~~~i~~~~~~~l~~L 133 (779)
.|+.|.+.+++-.+..+...+ ..++++++|++.++. ++...-..+ ..|++|++|+|..+. |+...-......+++|
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL 218 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKL 218 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhH
Confidence 567777777765444333222 347777777777763 332222222 456777777777632 3311111123356777
Q ss_pred CEEEccccc
Q 046050 134 EELRVSNNQ 142 (779)
Q Consensus 134 ~~L~Ls~n~ 142 (779)
++|+++++.
T Consensus 219 ~~lNlSwc~ 227 (483)
T KOG4341|consen 219 KYLNLSWCP 227 (483)
T ss_pred HHhhhccCc
Confidence 777777653
No 56
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.88 E-value=7.1e-07 Score=75.92 Aligned_cols=60 Identities=27% Similarity=0.339 Sum_probs=27.3
Q ss_pred CCCCEEEccCCcCccccCccccCCCCCCEEEccCCccCCCcchhhhCCCCCceEEccCCCCC
Q 046050 330 TNLVTLQLDANQFTGGIPENLLNCSLLGGLYLSDNHISGKIPKWLGNLSNLVDIIMPNNHLE 391 (779)
Q Consensus 330 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 391 (779)
+.++.|++++|+++ .+|..+..++.|+.++++.|.+. ..|..+..+.++..|+..+|...
T Consensus 77 ~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 77 PTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred chhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 34444444444444 33444444444444444444444 33344444444444444444443
No 57
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.81 E-value=2.8e-05 Score=71.22 Aligned_cols=103 Identities=21% Similarity=0.247 Sum_probs=65.7
Q ss_pred cCEEECCCCCCcccCCcccccC-CCCCcEEEccCcccccccChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCCCEEE
Q 046050 59 VKHLSMRNCYLYGTSDFQGLCE-LVHLQELHIGYNNIGGTLPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSLEELR 137 (779)
Q Consensus 59 L~~L~L~~n~l~~~~~~~~~~~-l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L~~L~ 137 (779)
=+.++|.+.++... +.++. +.....+||+.|.+.. -..|..+++|.+|.|.+|+|+ .|.+..-..+++|+.|.
T Consensus 21 e~e~~LR~lkip~i---enlg~~~d~~d~iDLtdNdl~~--l~~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~ 94 (233)
T KOG1644|consen 21 ERELDLRGLKIPVI---ENLGATLDQFDAIDLTDNDLRK--LDNLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLI 94 (233)
T ss_pred ccccccccccccch---hhccccccccceecccccchhh--cccCCCccccceEEecCCcce-eeccchhhhccccceEE
Confidence 45677777665321 12322 3456778888888763 234777888888888888888 77764445567888888
Q ss_pred cccccccccCCcccccCCCCCcEEECcCCc
Q 046050 138 VSNNQFQIPISFEPFFNHSKLKKFYGQKNR 167 (779)
Q Consensus 138 Ls~n~l~~~~~~~~~~~l~~L~~L~l~~~~ 167 (779)
|.+|.|........++.+++|+.|.+-+|.
T Consensus 95 LtnNsi~~l~dl~pLa~~p~L~~Ltll~Np 124 (233)
T KOG1644|consen 95 LTNNSIQELGDLDPLASCPKLEYLTLLGNP 124 (233)
T ss_pred ecCcchhhhhhcchhccCCccceeeecCCc
Confidence 888887743333445555555555444443
No 58
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.74 E-value=1.2e-06 Score=88.58 Aligned_cols=272 Identities=18% Similarity=0.134 Sum_probs=121.3
Q ss_pred CCcEEeCCCCcc--------ccCCCCCccEEEccccc-cccccchhh-cCCCCcCEEECCCCCCcccCCcccc-cCCCCC
Q 046050 16 NLETLELRDYHL--------ELLNFTNLEVLILDGSA-LHIRFLQSI-AVLTSVKHLSMRNCYLYGTSDFQGL-CELVHL 84 (779)
Q Consensus 16 ~L~~L~Ls~~~~--------~~~~l~~L~~L~L~~~~-~~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~-~~l~~L 84 (779)
.|+.|.++++.- --.+++++++|.+.++. ++......+ ..++.|++|++..|..........+ ..+++|
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL 218 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKL 218 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhH
Confidence 566666666553 12346666666666664 333333333 2456666666666432222111112 236666
Q ss_pred cEEEccCc-cccccc-ChhccCCCCCCEEeCCCCcCcccCCchhhc----CCCCCCEEEccccc-ccccCCcccccCCCC
Q 046050 85 QELHIGYN-NIGGTL-PWCLVNMTSLRILDIASNQITGNISSSPLR----YLTSLEELRVSNNQ-FQIPISFEPFFNHSK 157 (779)
Q Consensus 85 ~~L~Ls~n-~i~~~~-~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~----~l~~L~~L~Ls~n~-l~~~~~~~~~~~l~~ 157 (779)
++|++|.+ .|++.. .....++..++.+.+++|. +.+...+. +...+..+++..+. ++..-
T Consensus 219 ~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~---e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~---------- 285 (483)
T KOG4341|consen 219 KYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCL---ELELEALLKAAAYCLEILKLNLQHCNQLTDED---------- 285 (483)
T ss_pred HHhhhccCchhhcCcchHHhccchhhhhhhhcccc---cccHHHHHHHhccChHhhccchhhhccccchH----------
Confidence 66666666 343311 1223444455555555432 12221221 12223333333321 22110
Q ss_pred CcEEECcCCceeeecccCCCCCCccccEEECCCCcCCCC-cc-hhhhCCCCCCEEEccCCC-CCCcCchhhhhcCCCCCE
Q 046050 158 LKKFYGQKNRLFVEIESHSLTPKFQLQNISLSGCRCDFT-FP-RFLYYQHELRYVDLSHMN-LRGEFPNWLLENNKELET 234 (779)
Q Consensus 158 L~~L~l~~~~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~-~~-~~l~~~~~L~~L~Ls~n~-l~~~~~~~~~~~~~~L~~ 234 (779)
....-..+..|+.+..+++.-.+. .. ..-.++++|+.+.++.++ ++..--..+..+++.|+.
T Consensus 286 ---------------~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~ 350 (483)
T KOG4341|consen 286 ---------------LWLIACGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLER 350 (483)
T ss_pred ---------------HHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhh
Confidence 011112233555555555532111 11 112345566666666654 222112222345566666
Q ss_pred EECcCCccccc--CCCCCCCCCCccEEEccCCCCCcCC----chhhhhcCCCCCEEEccCCcCCcccCcccccccCCccc
Q 046050 235 LLLANNSLSGF--FQMPVNPLKQLTTIDVSKNFIQGHI----PTGIGAFLPRLEHFNISRNVLNGSIPCSLHMTMGCFSL 308 (779)
Q Consensus 235 L~L~~n~~~~~--~~~~l~~l~~L~~L~Ls~n~l~~~i----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~L 308 (779)
+++.++..... ....-.+++.|+++.++++.....- -.........|..+.+++++... ...++....|++|
T Consensus 351 l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~--d~~Le~l~~c~~L 428 (483)
T KOG4341|consen 351 LDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLIT--DATLEHLSICRNL 428 (483)
T ss_pred hcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCch--HHHHHHHhhCccc
Confidence 66666543211 1112235566777777665432010 00111124466777777776431 1222445566677
Q ss_pred cEEEccCCc
Q 046050 309 QILALSNNS 317 (779)
Q Consensus 309 ~~L~ls~n~ 317 (779)
+.+++-+++
T Consensus 429 eri~l~~~q 437 (483)
T KOG4341|consen 429 ERIELIDCQ 437 (483)
T ss_pred ceeeeechh
Confidence 777777664
No 59
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.71 E-value=5.8e-05 Score=69.18 Aligned_cols=131 Identities=19% Similarity=0.179 Sum_probs=97.2
Q ss_pred hhhhhCCCCCCcEEeCCCCccc-cCC----CCCccEEEccccccccccchhhcCCCCcCEEECCCCCCcccCCccccc-C
Q 046050 7 LQSLWTPFPNLETLELRDYHLE-LLN----FTNLEVLILDGSALHIRFLQSIAVLTSVKHLSMRNCYLYGTSDFQGLC-E 80 (779)
Q Consensus 7 ~~~~~~~~~~L~~L~Ls~~~~~-~~~----l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-~ 80 (779)
.+.++..+. =+++||++..+. ..+ +.+...++|++|.+. ..+.|..++.|.+|.+++|+|....| .+. .
T Consensus 12 ~pqy~~~~~-e~e~~LR~lkip~ienlg~~~d~~d~iDLtdNdl~--~l~~lp~l~rL~tLll~nNrIt~I~p--~L~~~ 86 (233)
T KOG1644|consen 12 APQYINSVR-ERELDLRGLKIPVIENLGATLDQFDAIDLTDNDLR--KLDNLPHLPRLHTLLLNNNRITRIDP--DLDTF 86 (233)
T ss_pred chhhhhhcc-ccccccccccccchhhccccccccceecccccchh--hcccCCCccccceEEecCCcceeecc--chhhh
Confidence 344444443 578899999883 333 446778999999875 34557788999999999999976655 344 4
Q ss_pred CCCCcEEEccCcccccc-cChhccCCCCCCEEeCCCCcCcccCC---chhhcCCCCCCEEEcccccc
Q 046050 81 LVHLQELHIGYNNIGGT-LPWCLVNMTSLRILDIASNQITGNIS---SSPLRYLTSLEELRVSNNQF 143 (779)
Q Consensus 81 l~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~i~~~i~---~~~~~~l~~L~~L~Ls~n~l 143 (779)
+++|+.|.|.+|+|... .-..+..||+|++|.+-+|.++ .-. ...+..+++|+.||+..-.-
T Consensus 87 ~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv~-~k~~YR~yvl~klp~l~~LDF~kVt~ 152 (233)
T KOG1644|consen 87 LPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLLGNPVE-HKKNYRLYVLYKLPSLRTLDFQKVTR 152 (233)
T ss_pred ccccceEEecCcchhhhhhcchhccCCccceeeecCCchh-cccCceeEEEEecCcceEeehhhhhH
Confidence 78899999999988742 1234778999999999999987 322 22467899999999987654
No 60
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.62 E-value=0.00015 Score=75.61 Aligned_cols=57 Identities=14% Similarity=0.045 Sum_probs=32.0
Q ss_pred hcCCCCCCEEEccCccCcccCCcCcCCCcccEEEccCCcCcccchhhHhhcceEEEccCc
Q 046050 398 LCKLNFLTVLDLEVNNISGSLPSCFSSWLLTQVHLSRNKIEGQLEDVFGDILVTLDLSYN 457 (779)
Q Consensus 398 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~L~~L~L~~n 457 (779)
+..+.+++.|++++|.++.. |. -..+|++|.++++.--...|..+...|+.|++++|
T Consensus 48 ~~~~~~l~~L~Is~c~L~sL-P~--LP~sLtsL~Lsnc~nLtsLP~~LP~nLe~L~Ls~C 104 (426)
T PRK15386 48 IEEARASGRLYIKDCDIESL-PV--LPNELTEITIENCNNLTTLPGSIPEGLEKLTVCHC 104 (426)
T ss_pred HHHhcCCCEEEeCCCCCccc-CC--CCCCCcEEEccCCCCcccCCchhhhhhhheEccCc
Confidence 44578888888888877733 42 13457777776643222223333333555555554
No 61
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.50 E-value=0.0003 Score=62.68 Aligned_cols=122 Identities=20% Similarity=0.225 Sum_probs=51.7
Q ss_pred cchhhhhCCCCCCcEEeCCCCcc-----ccCCCCCccEEEccccccccccchhhcCCCCcCEEECCCCCCcccCCccccc
Q 046050 5 SLLQSLWTPFPNLETLELRDYHL-----ELLNFTNLEVLILDGSALHIRFLQSIAVLTSVKHLSMRNCYLYGTSDFQGLC 79 (779)
Q Consensus 5 ~~~~~~~~~~~~L~~L~Ls~~~~-----~~~~l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 79 (779)
.+.+..|.++++|+.+.+...-- .+.++++|+.+.+..+ +......+|..++.++.+.+.+ .+. .++...+.
T Consensus 2 ~i~~~~F~~~~~l~~i~~~~~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~-~i~~~~F~ 78 (129)
T PF13306_consen 2 SIGNNAFYNCSNLESITFPNTIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLK-SIGDNAFS 78 (129)
T ss_dssp EE-TTTTTT-TT--EEEETST--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT--EE-TTTTT
T ss_pred EECHHHHhCCCCCCEEEECCCeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccc-cccccccc
Confidence 34566777777777777764211 3455556666666653 4444445566665666666654 221 22223455
Q ss_pred CCCCCcEEEccCcccccccChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCC
Q 046050 80 ELVHLQELHIGYNNIGGTLPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSL 133 (779)
Q Consensus 80 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L 133 (779)
.+++|+.+++..+ +.......|.++ +|+.+.+.. .+. .++...|.++++|
T Consensus 79 ~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~-~i~~~~F~~~~~l 128 (129)
T PF13306_consen 79 NCTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NIT-KIEENAFKNCTKL 128 (129)
T ss_dssp T-TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-S-S----GGG-----
T ss_pred ccccccccccCcc-ccEEchhhhcCC-CceEEEECC-Ccc-EECCccccccccC
Confidence 5666666666544 443444455555 666666554 333 4455455555444
No 62
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.41 E-value=0.00046 Score=72.14 Aligned_cols=76 Identities=17% Similarity=0.218 Sum_probs=50.8
Q ss_pred hhCCCCCceEEccCCCCCCCcchhhcCCCCCCEEEccCccCcccCCcCcCCCcccEEEccCC-cCcccchhhHhhcceEE
Q 046050 374 LGNLSNLVDIIMPNNHLEGPIPANLCKLNFLTVLDLEVNNISGSLPSCFSSWLLTQVHLSRN-KIEGQLEDVFGDILVTL 452 (779)
Q Consensus 374 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~~~~~~L~~L 452 (779)
+..+.++..|++++|.++ .+|. -..+|+.|.++++.-...+|+.+ ..+|+.|++++| .+... +..|+.|
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L-P~nLe~L~Ls~Cs~L~sL-----P~sLe~L 117 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI-PEGLEKLTVCHCPEISGL-----PESVRSL 117 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh-hhhhhheEccCccccccc-----ccccceE
Confidence 455688999999999887 4452 23469999998755434555433 457999999988 55432 2337777
Q ss_pred EccCccc
Q 046050 453 DLSYNRF 459 (779)
Q Consensus 453 ~L~~n~l 459 (779)
++..+..
T Consensus 118 ~L~~n~~ 124 (426)
T PRK15386 118 EIKGSAT 124 (426)
T ss_pred EeCCCCC
Confidence 7765544
No 63
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.34 E-value=8.3e-05 Score=84.49 Aligned_cols=157 Identities=22% Similarity=0.284 Sum_probs=110.6
Q ss_pred ccccchhhhhCCCC--CCcEEeCCCCccc-------c-CCCCCccEEEccccccccc-cchhhcCCCCcCEEECCCCCCc
Q 046050 2 NVSSLLQSLWTPFP--NLETLELRDYHLE-------L-LNFTNLEVLILDGSALHIR-FLQSIAVLTSVKHLSMRNCYLY 70 (779)
Q Consensus 2 ~~~~~~~~~~~~~~--~L~~L~Ls~~~~~-------~-~~l~~L~~L~L~~~~~~~~-~~~~~~~l~~L~~L~L~~n~l~ 70 (779)
||..++..++-+.. +|+.||++|...- + .-+|.|++|.+++-.+... .-....++++|+.||+|+..+.
T Consensus 107 di~~lL~~~Ln~~sr~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~ 186 (699)
T KOG3665|consen 107 DIISLLKDLLNEESRQNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNIS 186 (699)
T ss_pred cHHHHHHHHHhHHHHHhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCcc
Confidence 34455555544443 8999999996641 2 2589999999999776543 3345567899999999999885
Q ss_pred ccCCcccccCCCCCcEEEccCccccc-ccChhccCCCCCCEEeCCCCcCcccCC---ch---hhcCCCCCCEEEcccccc
Q 046050 71 GTSDFQGLCELVHLQELHIGYNNIGG-TLPWCLVNMTSLRILDIASNQITGNIS---SS---PLRYLTSLEELRVSNNQF 143 (779)
Q Consensus 71 ~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~i~---~~---~~~~l~~L~~L~Ls~n~l 143 (779)
.. .+++++++|++|.+.+=.+.. ..-..+-++++|++||+|..... .-+ .. .-..||+|+.||.|++.+
T Consensus 187 nl---~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~-~~~~ii~qYlec~~~LpeLrfLDcSgTdi 262 (699)
T KOG3665|consen 187 NL---SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNN-DDTKIIEQYLECGMVLPELRFLDCSGTDI 262 (699)
T ss_pred Cc---HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCeeeccccccc-cchHHHHHHHHhcccCccccEEecCCcch
Confidence 33 478999999999998777764 22335678999999999987654 222 10 123489999999999988
Q ss_pred cccCCcccccCCCCCcEEE
Q 046050 144 QIPISFEPFFNHSKLKKFY 162 (779)
Q Consensus 144 ~~~~~~~~~~~l~~L~~L~ 162 (779)
...+-...+...++|+.+.
T Consensus 263 ~~~~le~ll~sH~~L~~i~ 281 (699)
T KOG3665|consen 263 NEEILEELLNSHPNLQQIA 281 (699)
T ss_pred hHHHHHHHHHhCccHhhhh
Confidence 7655544555566666554
No 64
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.31 E-value=0.00091 Score=59.50 Aligned_cols=59 Identities=20% Similarity=0.285 Sum_probs=19.7
Q ss_pred ccCCCCCcEEEccCcccccccChhccCCCCCCEEeCCCCcCcccCCchhhcCCCCCCEEEcc
Q 046050 78 LCELVHLQELHIGYNNIGGTLPWCLVNMTSLRILDIASNQITGNISSSPLRYLTSLEELRVS 139 (779)
Q Consensus 78 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~~l~~L~~L~Ls 139 (779)
|..+++|+.+.+.. .+......+|..+++|+.+.+.++ +. .++...|..+++++.+.+.
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~-~i~~~~F~~~~~l~~i~~~ 66 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LT-SIGDNAFSNCKSLESITFP 66 (129)
T ss_dssp TTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TS-CE-TTTTTT-TT-EEEEET
T ss_pred HhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-cc-ccceeeeeccccccccccc
Confidence 33344444444432 233333334444444444444442 33 3333344444444444443
No 65
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.08 E-value=0.00025 Score=68.16 Aligned_cols=105 Identities=22% Similarity=0.303 Sum_probs=68.6
Q ss_pred ccEEEccccc-cccccchhhcCCCCcCEEECCCCCCcccCCcccccCCCCCcEEEccCc--ccccccChhccCCCCCCEE
Q 046050 35 LEVLILDGSA-LHIRFLQSIAVLTSVKHLSMRNCYLYGTSDFQGLCELVHLQELHIGYN--NIGGTLPWCLVNMTSLRIL 111 (779)
Q Consensus 35 L~~L~L~~~~-~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n--~i~~~~~~~~~~l~~L~~L 111 (779)
++.+.+..+. ..+.+..-...+..|+.|++.+..++.. ..+-.+++|++|++|.| ++++.++....++++|++|
T Consensus 20 v~~l~lD~~~s~~g~~~gl~d~~~~le~ls~~n~gltt~---~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l 96 (260)
T KOG2739|consen 20 VDELFLDNARSGAGKLGGLTDEFVELELLSVINVGLTTL---TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVL 96 (260)
T ss_pred hhhhhcchhhhcCCCcccccccccchhhhhhhccceeec---ccCCCcchhhhhcccCCcccccccceehhhhCCceeEE
Confidence 4444444332 2223334444566777788777766422 34667888888999888 6666666666777888888
Q ss_pred eCCCCcCcc--cCCchhhcCCCCCCEEEccccccc
Q 046050 112 DIASNQITG--NISSSPLRYLTSLEELRVSNNQFQ 144 (779)
Q Consensus 112 ~Ls~n~i~~--~i~~~~~~~l~~L~~L~Ls~n~l~ 144 (779)
++++|+|.. +++ .+..+.+|..||+.+|..+
T Consensus 97 ~ls~Nki~~lstl~--pl~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 97 NLSGNKIKDLSTLR--PLKELENLKSLDLFNCSVT 129 (260)
T ss_pred eecCCccccccccc--hhhhhcchhhhhcccCCcc
Confidence 888888861 222 2556677788888887654
No 66
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.01 E-value=0.00033 Score=67.32 Aligned_cols=106 Identities=22% Similarity=0.273 Sum_probs=71.5
Q ss_pred CCCCccEEEccccccccccchhhcCCCCcCEEECCCC--CCcccCCcccccCCCCCcEEEccCccccc-ccChhccCCCC
Q 046050 31 NFTNLEVLILDGSALHIRFLQSIAVLTSVKHLSMRNC--YLYGTSDFQGLCELVHLQELHIGYNNIGG-TLPWCLVNMTS 107 (779)
Q Consensus 31 ~l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~n--~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~ 107 (779)
.+..|+.|.+.+..++. ...+..+++|++|.++.| ++.+.++. ...++++|++|++++|+|.. ..-..+..+.+
T Consensus 41 ~~~~le~ls~~n~gltt--~~~~P~Lp~LkkL~lsdn~~~~~~~l~v-l~e~~P~l~~l~ls~Nki~~lstl~pl~~l~n 117 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTT--LTNFPKLPKLKKLELSDNYRRVSGGLEV-LAEKAPNLKVLNLSGNKIKDLSTLRPLKELEN 117 (260)
T ss_pred cccchhhhhhhccceee--cccCCCcchhhhhcccCCccccccccee-hhhhCCceeEEeecCCccccccccchhhhhcc
Confidence 34566666666666542 234567789999999999 44444443 34456999999999998873 11123567788
Q ss_pred CCEEeCCCCcCcccCCc---hhhcCCCCCCEEEccc
Q 046050 108 LRILDIASNQITGNISS---SPLRYLTSLEELRVSN 140 (779)
Q Consensus 108 L~~L~Ls~n~i~~~i~~---~~~~~l~~L~~L~Ls~ 140 (779)
|..||+.+|..+. +.. ..|..+++|++||-..
T Consensus 118 L~~Ldl~n~~~~~-l~dyre~vf~ll~~L~~LD~~d 152 (260)
T KOG2739|consen 118 LKSLDLFNCSVTN-LDDYREKVFLLLPSLKYLDGCD 152 (260)
T ss_pred hhhhhcccCCccc-cccHHHHHHHHhhhhccccccc
Confidence 9999999988773 322 2467789999887544
No 67
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.86 E-value=6e-05 Score=72.31 Aligned_cols=101 Identities=25% Similarity=0.208 Sum_probs=73.1
Q ss_pred CCCccEEEccccccccccchhhcCCCCcCEEECCCCCCcccCCcccccCCCCCcEEEccCccccccc-ChhccCCCCCCE
Q 046050 32 FTNLEVLILDGSALHIRFLQSIAVLTSVKHLSMRNCYLYGTSDFQGLCELVHLQELHIGYNNIGGTL-PWCLVNMTSLRI 110 (779)
Q Consensus 32 l~~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~-~~~~~~l~~L~~ 110 (779)
+.+.+.|+..+|.++.+ ....+++.|++|.|+-|.|+... .+..|++|++|.|..|.|.... -..+.++++|++
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~---pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLA---PLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccch---hHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 55677788888887643 33457788899999999886443 4778889999999999887532 235688899999
Q ss_pred EeCCCCcCcccCCc----hhhcCCCCCCEEE
Q 046050 111 LDIASNQITGNISS----SPLRYLTSLEELR 137 (779)
Q Consensus 111 L~Ls~n~i~~~i~~----~~~~~l~~L~~L~ 137 (779)
|.|..|.-.|.-+. ..+..|++|+.||
T Consensus 93 LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred HhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 99988887654443 1456678888775
No 68
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.11 E-value=0.00034 Score=67.29 Aligned_cols=87 Identities=21% Similarity=0.254 Sum_probs=56.9
Q ss_pred CCCCEEEccCCCCCCcCchhhhhcCCCCCEEECcCCcccccCCCCCCCCCCccEEEccCCCCCcCCchh-hhhcCCCCCE
Q 046050 205 HELRYVDLSHMNLRGEFPNWLLENNKELETLLLANNSLSGFFQMPVNPLKQLTTIDVSKNFIQGHIPTG-IGAFLPRLEH 283 (779)
Q Consensus 205 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~-~~~~l~~L~~ 283 (779)
.+.+.|++.++.+. .|. +...++.|+.|.|+-|+|+.. ..+..|++|++|+|..|.|. .+.+- ....+|+|+.
T Consensus 19 ~~vkKLNcwg~~L~-DIs--ic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~-sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 19 ENVKKLNCWGCGLD-DIS--ICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIE-SLDELEYLKNLPSLRT 92 (388)
T ss_pred HHhhhhcccCCCcc-HHH--HHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccc-cHHHHHHHhcCchhhh
Confidence 45667777777776 333 245778888888888888765 45677788888888888876 44332 2233666777
Q ss_pred EEccCCcCCcccCc
Q 046050 284 FNISRNVLNGSIPC 297 (779)
Q Consensus 284 L~l~~n~l~~~~~~ 297 (779)
|.|..|+-.+..+.
T Consensus 93 LWL~ENPCc~~ag~ 106 (388)
T KOG2123|consen 93 LWLDENPCCGEAGQ 106 (388)
T ss_pred HhhccCCcccccch
Confidence 77777665554443
No 69
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.98 E-value=0.0013 Score=73.55 Aligned_cols=62 Identities=19% Similarity=0.140 Sum_probs=26.6
Q ss_pred CCCCcEEEccCcc-cccccChhccC-CCCCCEEeCCCCc-CcccCCchhhcCCCCCCEEEccccc
Q 046050 81 LVHLQELHIGYNN-IGGTLPWCLVN-MTSLRILDIASNQ-ITGNISSSPLRYLTSLEELRVSNNQ 142 (779)
Q Consensus 81 l~~L~~L~Ls~n~-i~~~~~~~~~~-l~~L~~L~Ls~n~-i~~~i~~~~~~~l~~L~~L~Ls~n~ 142 (779)
+.+|+.|+++++. ++...-..+.. +++|++|.+.++. ++..--......+++|++|+++.+.
T Consensus 242 ~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~ 306 (482)
T KOG1947|consen 242 CRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCH 306 (482)
T ss_pred cCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCc
Confidence 4555555555554 33322222222 5555555544444 3311111122334555555555443
No 70
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.31 E-value=0.0072 Score=34.51 Aligned_cols=12 Identities=50% Similarity=0.639 Sum_probs=5.1
Q ss_pred CcEEEcCCCcCC
Q 046050 604 IRALNLSHNNLM 615 (779)
Q Consensus 604 L~~L~Ls~N~l~ 615 (779)
|++|||++|+++
T Consensus 2 L~~Ldls~n~l~ 13 (22)
T PF00560_consen 2 LEYLDLSGNNLT 13 (22)
T ss_dssp ESEEEETSSEES
T ss_pred ccEEECCCCcCE
Confidence 344444444444
No 71
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.07 E-value=0.0073 Score=34.47 Aligned_cols=16 Identities=31% Similarity=0.661 Sum_probs=7.5
Q ss_pred CcEEEccCCcCcccCCC
Q 046050 652 LAIFSVAHNNLSGKVPD 668 (779)
Q Consensus 652 L~~L~ls~N~l~~~~p~ 668 (779)
|++||+++|+++ .+|.
T Consensus 2 L~~Ldls~n~l~-~ip~ 17 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPS 17 (22)
T ss_dssp ESEEEETSSEES-EEGT
T ss_pred ccEEECCCCcCE-eCCh
Confidence 444455555444 3443
No 72
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=94.90 E-value=0.0052 Score=68.76 Aligned_cols=62 Identities=24% Similarity=0.293 Sum_probs=26.0
Q ss_pred CCCccEEEccCCC-CCcCCchhhhhcCCCCCEEEccCCc-CCcccCccc-ccccCCccccEEEccCCc
Q 046050 253 LKQLTTIDVSKNF-IQGHIPTGIGAFLPRLEHFNISRNV-LNGSIPCSL-HMTMGCFSLQILALSNNS 317 (779)
Q Consensus 253 l~~L~~L~Ls~n~-l~~~i~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~-~~~~~~~~L~~L~ls~n~ 317 (779)
+++|+.++++.+. +++..-..+...+++|+.|.+.++. ++ ...+ ....+|+.|++|+++++.
T Consensus 242 ~~~L~~l~l~~~~~isd~~l~~l~~~c~~L~~L~l~~c~~lt---~~gl~~i~~~~~~L~~L~l~~c~ 306 (482)
T KOG1947|consen 242 CRKLKSLDLSGCGLVTDIGLSALASRCPNLETLSLSNCSNLT---DEGLVSIAERCPSLRELDLSGCH 306 (482)
T ss_pred cCCcCccchhhhhccCchhHHHHHhhCCCcceEccCCCCccc---hhHHHHHHHhcCcccEEeeecCc
Confidence 3445555555444 3322222233334455555544443 22 1111 233344455555555543
No 73
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.98 E-value=0.0092 Score=55.22 Aligned_cols=82 Identities=24% Similarity=0.321 Sum_probs=55.3
Q ss_pred CccEEEccccccccccchhhcCCCCcCEEECCCCCCcccCCcccccC-CCCCcEEEccCc-ccccccChhccCCCCCCEE
Q 046050 34 NLEVLILDGSALHIRFLQSIAVLTSVKHLSMRNCYLYGTSDFQGLCE-LVHLQELHIGYN-NIGGTLPWCLVNMTSLRIL 111 (779)
Q Consensus 34 ~L~~L~L~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~-l~~L~~L~Ls~n-~i~~~~~~~~~~l~~L~~L 111 (779)
.++.++-+++.|..+-.+.+..++.++.|.+.+|.-.+..-.+.++. .++|+.|++++| +|+...-..+.++++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 45667777777777777778888888888888886433322222322 567888888877 6776656667777777777
Q ss_pred eCCC
Q 046050 112 DIAS 115 (779)
Q Consensus 112 ~Ls~ 115 (779)
.+.+
T Consensus 182 ~l~~ 185 (221)
T KOG3864|consen 182 HLYD 185 (221)
T ss_pred HhcC
Confidence 6664
No 74
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.22 E-value=0.0011 Score=72.19 Aligned_cols=61 Identities=31% Similarity=0.359 Sum_probs=36.7
Q ss_pred eeEEeccCCccCCC----CCccccCc-ccCcEEEcCCCcCCccCc----hhhhCCCCCCEEECCCCcCcC
Q 046050 580 MFGLDLSCNKLTGE----IPFQIGYL-NMIRALNLSHNNLMGTIP----STFSHLSQIESLDLSYNMLQG 640 (779)
Q Consensus 580 L~~LdLs~N~l~~~----~p~~l~~l-~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~ 640 (779)
+..++++.|++.+. ..+.+..+ ..++.++++.|.|+..-. ..+...++++.|.+++|.+..
T Consensus 235 ~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~~ 304 (478)
T KOG4308|consen 235 LRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLTD 304 (478)
T ss_pred hHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCcccc
Confidence 44477777776632 22334444 566777777777764433 344556677777777777763
No 75
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=93.18 E-value=0.0033 Score=59.07 Aligned_cols=84 Identities=18% Similarity=0.146 Sum_probs=73.1
Q ss_pred cceeeEEeccCCccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEE
Q 046050 577 LKIMFGLDLSCNKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFS 656 (779)
Q Consensus 577 l~~L~~LdLs~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 656 (779)
....+.||++.|++. ..-..|+-++.|..||+|.|++. ..|..++++..+..+++.+|..+ ..|-++...+.+++++
T Consensus 41 ~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e 117 (326)
T KOG0473|consen 41 FKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNE 117 (326)
T ss_pred cceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhh
Confidence 356778999999987 55567788899999999999998 78888999999999999999988 7888999999999999
Q ss_pred ccCCcCc
Q 046050 657 VAHNNLS 663 (779)
Q Consensus 657 ls~N~l~ 663 (779)
+-+|++.
T Consensus 118 ~k~~~~~ 124 (326)
T KOG0473|consen 118 QKKTEFF 124 (326)
T ss_pred hccCcch
Confidence 9999875
No 76
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.87 E-value=0.063 Score=28.33 Aligned_cols=13 Identities=46% Similarity=0.848 Sum_probs=4.7
Q ss_pred CCCEEeCCCCcCc
Q 046050 107 SLRILDIASNQIT 119 (779)
Q Consensus 107 ~L~~L~Ls~n~i~ 119 (779)
+|+.|++++|+++
T Consensus 2 ~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 2 NLRTLDLSNNRLT 14 (17)
T ss_dssp T-SEEEETSS--S
T ss_pred ccCEEECCCCCCC
Confidence 3444444444444
No 77
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=92.81 E-value=0.1 Score=31.17 Aligned_cols=23 Identities=26% Similarity=0.621 Sum_probs=16.0
Q ss_pred CCCCCEEeCCCCcCcccCCchhhc
Q 046050 105 MTSLRILDIASNQITGNISSSPLR 128 (779)
Q Consensus 105 l~~L~~L~Ls~n~i~~~i~~~~~~ 128 (779)
+++|++|+|++|+|+ .+|.+.|.
T Consensus 1 L~~L~~L~L~~N~l~-~lp~~~f~ 23 (26)
T smart00370 1 LPNLRELDLSNNQLS-SLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCC-cCCHHHcc
Confidence 456777777777777 77765554
No 78
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=92.81 E-value=0.1 Score=31.17 Aligned_cols=23 Identities=26% Similarity=0.621 Sum_probs=16.0
Q ss_pred CCCCCEEeCCCCcCcccCCchhhc
Q 046050 105 MTSLRILDIASNQITGNISSSPLR 128 (779)
Q Consensus 105 l~~L~~L~Ls~n~i~~~i~~~~~~ 128 (779)
+++|++|+|++|+|+ .+|.+.|.
T Consensus 1 L~~L~~L~L~~N~l~-~lp~~~f~ 23 (26)
T smart00369 1 LPNLRELDLSNNQLS-SLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCC-cCCHHHcc
Confidence 456777777777777 77765554
No 79
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=92.77 E-value=0.0057 Score=57.58 Aligned_cols=96 Identities=22% Similarity=0.257 Sum_probs=79.7
Q ss_pred CccCCCCCccccCcccCcEEEcCCCcCCccCchhhhCCCCCCEEECCCCcCcCCCchhhhhcccCcEEEccCCcCcccCC
Q 046050 588 NKLTGEIPFQIGYLNMIRALNLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGKIPTQLVELYALAIFSVAHNNLSGKVP 667 (779)
Q Consensus 588 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 667 (779)
-.++...-..+......+.||++.|++. ..-..|+-++.|..||++.|++. ..|..+.++..+..+++..|..+ ..|
T Consensus 28 s~~s~~~v~ei~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p 104 (326)
T KOG0473|consen 28 SELSEIPVREIASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQP 104 (326)
T ss_pred HHhcccchhhhhccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCC
Confidence 3444333356777889999999999987 45666888999999999999998 88999999999999999999998 677
Q ss_pred CCCCcCCCCCCCcccCCCC
Q 046050 668 DRVGQFATFTENSYDGNSL 686 (779)
Q Consensus 668 ~~~~~~~~l~~~~~~~N~~ 686 (779)
-++++.+.......-+||.
T Consensus 105 ~s~~k~~~~k~~e~k~~~~ 123 (326)
T KOG0473|consen 105 KSQKKEPHPKKNEQKKTEF 123 (326)
T ss_pred ccccccCCcchhhhccCcc
Confidence 7788998888887777774
No 80
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=91.53 E-value=0.12 Score=27.25 Aligned_cols=11 Identities=55% Similarity=0.902 Sum_probs=3.3
Q ss_pred CcEEEcCCCcC
Q 046050 604 IRALNLSHNNL 614 (779)
Q Consensus 604 L~~L~Ls~N~l 614 (779)
|+.|+|++|++
T Consensus 3 L~~L~l~~n~L 13 (17)
T PF13504_consen 3 LRTLDLSNNRL 13 (17)
T ss_dssp -SEEEETSS--
T ss_pred cCEEECCCCCC
Confidence 33444444433
No 81
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=90.74 E-value=0.23 Score=29.61 Aligned_cols=14 Identities=43% Similarity=0.596 Sum_probs=7.6
Q ss_pred CCCCEEECCCCcCc
Q 046050 626 SQIESLDLSYNMLQ 639 (779)
Q Consensus 626 ~~L~~L~Ls~N~l~ 639 (779)
++|++|+|++|+|+
T Consensus 2 ~~L~~L~L~~N~l~ 15 (26)
T smart00370 2 PNLRELDLSNNQLS 15 (26)
T ss_pred CCCCEEECCCCcCC
Confidence 44555555555555
No 82
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=90.74 E-value=0.23 Score=29.61 Aligned_cols=14 Identities=43% Similarity=0.596 Sum_probs=7.6
Q ss_pred CCCCEEECCCCcCc
Q 046050 626 SQIESLDLSYNMLQ 639 (779)
Q Consensus 626 ~~L~~L~Ls~N~l~ 639 (779)
++|++|+|++|+|+
T Consensus 2 ~~L~~L~L~~N~l~ 15 (26)
T smart00369 2 PNLRELDLSNNQLS 15 (26)
T ss_pred CCCCEEECCCCcCC
Confidence 44555555555555
No 83
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=90.62 E-value=0.0037 Score=68.15 Aligned_cols=37 Identities=22% Similarity=0.346 Sum_probs=19.2
Q ss_pred ccEEEccCCCCCcCCchhhhh---cCCCCCEEEccCCcCC
Q 046050 256 LTTIDVSKNFIQGHIPTGIGA---FLPRLEHFNISRNVLN 292 (779)
Q Consensus 256 L~~L~Ls~n~l~~~i~~~~~~---~l~~L~~L~l~~n~l~ 292 (779)
+..+.+.+|.+.......+.. ..+.|+.|++++|.+.
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~ 128 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLG 128 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCc
Confidence 666677777665333222222 1345555666666554
No 84
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=86.65 E-value=0.21 Score=29.09 Aligned_cols=14 Identities=43% Similarity=0.669 Sum_probs=5.7
Q ss_pred CCCCEEECCCCcCc
Q 046050 626 SQIESLDLSYNMLQ 639 (779)
Q Consensus 626 ~~L~~L~Ls~N~l~ 639 (779)
++|++|+|++|+|+
T Consensus 2 ~~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 2 PNLETLDLSNNQIT 15 (24)
T ss_dssp TT-SEEE-TSSBEH
T ss_pred CCCCEEEccCCcCC
Confidence 34444555555444
No 85
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=85.63 E-value=0.19 Score=29.21 Aligned_cols=15 Identities=27% Similarity=0.417 Sum_probs=6.4
Q ss_pred CCCcEEEccCccccc
Q 046050 82 VHLQELHIGYNNIGG 96 (779)
Q Consensus 82 ~~L~~L~Ls~n~i~~ 96 (779)
++|++|+|++|.|++
T Consensus 2 ~~L~~L~l~~n~i~~ 16 (24)
T PF13516_consen 2 PNLETLDLSNNQITD 16 (24)
T ss_dssp TT-SEEE-TSSBEHH
T ss_pred CCCCEEEccCCcCCH
Confidence 345555555555443
No 86
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=79.13 E-value=5.2 Score=42.50 Aligned_cols=273 Identities=15% Similarity=0.020 Sum_probs=122.6
Q ss_pred CCCCEEECcCCcccccCCCCCCCCCCccEEEccCCCCCcC----CchhhhhcCCCCCEEEccCCcCCcccCcccccccCC
Q 046050 230 KELETLLLANNSLSGFFQMPVNPLKQLTTIDVSKNFIQGH----IPTGIGAFLPRLEHFNISRNVLNGSIPCSLHMTMGC 305 (779)
Q Consensus 230 ~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~----i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~ 305 (779)
+.+++++++.|.+....+..+.. ..--+.++.+..+.. ++..-. -..+.+++++.|.....+|..+....+-
T Consensus 165 pr~r~~dls~npi~dkvpihl~~--p~~pl~lr~c~lsskfis~l~~qsg--~~~lteldls~n~~Kddip~~~n~~a~~ 240 (553)
T KOG4242|consen 165 PRARQHDLSPNPIGDKVPIHLPQ--PGNPLSLRVCELSSKFISKLLIQSG--RLWLTELDLSTNGGKDDIPRTLNKKAGT 240 (553)
T ss_pred chhhhhccCCCcccccCCccccC--CCCccchhhhhhhhhHHHHhhhhhc--cccccccccccCCCCccchhHHHHhhhh
Confidence 45677778877776554443321 111144555544311 111111 1256777777777776666655333333
Q ss_pred ccccEEEccCCcCCc---cccccccCCCCCCEEEccCCcCcc----ccC----ccccCCCCCCEEEccCCccCCCcchhh
Q 046050 306 FSLQILALSNNSLQG---HIFSRSFNLTNLVTLQLDANQFTG----GIP----ENLLNCSLLGGLYLSDNHISGKIPKWL 374 (779)
Q Consensus 306 ~~L~~L~ls~n~l~~---~~~~~~~~l~~L~~L~l~~n~l~~----~~~----~~~~~l~~L~~L~L~~n~i~~~~~~~~ 374 (779)
..++.++.+.-.+.- ..+-..+.-+.+...+++.|.... ..+ +.+..-+++ +|++..+..-..-+..+
T Consensus 241 ~vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng~s~skg~Egg~~~k~~fS~~~sg-hln~~~~~~psE~lks~ 319 (553)
T KOG4242|consen 241 LVLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNGTSPSKGEEGGGAEKDTFSPDPSG-HLNSRPRYTPSEKLKSM 319 (553)
T ss_pred hhhhcccccccccchhhcccccccccccccchhhhccCCCCcccccccccccccccCcCccc-ccccccccCchhhhhhh
Confidence 346666666554431 111222344566666666664431 111 223333444 55555444332211111
Q ss_pred -hC-----CCCCceEEccCCCCCCCc-chhhcCCCCCCEEEccCccCcccCCcCcC---CCcccEEEccCCcCc---ccc
Q 046050 375 -GN-----LSNLVDIIMPNNHLEGPI-PANLCKLNFLTVLDLEVNNISGSLPSCFS---SWLLTQVHLSRNKIE---GQL 441 (779)
Q Consensus 375 -~~-----l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~---~~~L~~L~l~~n~l~---~~~ 441 (779)
-. -+.=-++++..|...+.. -.+=..-..+++|+++.|...+....... .+..+.+++..-.-. +..
T Consensus 320 LLgla~ne~t~g~rldl~~cp~~~a~vleaci~g~R~q~l~~rdnnldgeg~~vgk~~~s~s~r~l~agrs~~kqvm~s~ 399 (553)
T KOG4242|consen 320 LLGLAENEATLGARLDLRRCPLERAEVLEACIFGQRVQVLLQRDNNLDGEGGAVGKRKQSKSGRILKAGRSGDKQVMDSS 399 (553)
T ss_pred hcccccccccccccCChhhccccccchhhccccceeeeEeeccccccccccccccceeeccccccccccccCCceecccc
Confidence 00 001113444444433211 11111123477778887777766555443 344555655443221 000
Q ss_pred --hhhH---h---hcceEEEccCccccCcCchh---hhcCCCCcEEEccCCcCcc----cCcccccCCCCCCEEEccCCc
Q 046050 442 --EDVF---G---DILVTLDLSYNRFSGRIPNW---IDKLSHLSYLILANNNLEG----EVPVQLCLLKQLQLIDLSHNN 506 (779)
Q Consensus 442 --~~~~---~---~~L~~L~L~~n~l~~~~~~~---~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~ 506 (779)
.... . ..+..+.++.+++..-.... ...-+.+..|++++|.... .+|.....-..++.+..+.|.
T Consensus 400 ~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in~l~stqtl~kldisgn~mgd~gap~lpkalq~n~rlr~ipds~n~ 479 (553)
T KOG4242|consen 400 TEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAINKLLSTQTLAKLDISGNGMGDGGAPPLPKALQSNCRLRPIPDSLNL 479 (553)
T ss_pred ccchhhhhhhcccccccCcccCCCcccccHHHHHHhhccCcccccccccCCCcccCCCCcCccccCCCCccCCCCCCCCC
Confidence 0000 0 11666777777665332222 2234556777777776542 223333333344444444444
Q ss_pred C
Q 046050 507 L 507 (779)
Q Consensus 507 l 507 (779)
.
T Consensus 480 p 480 (553)
T KOG4242|consen 480 P 480 (553)
T ss_pred c
Confidence 3
No 87
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=76.78 E-value=15 Score=39.30 Aligned_cols=84 Identities=20% Similarity=0.071 Sum_probs=42.7
Q ss_pred eeeEEeccCCccCCCCCccc--cCcccCcEEEcCCCcCC-ccCchhhh--------CCCCCCEEECCCCcCcCCCch---
Q 046050 579 IMFGLDLSCNKLTGEIPFQI--GYLNMIRALNLSHNNLM-GTIPSTFS--------HLSQIESLDLSYNMLQGKIPT--- 644 (779)
Q Consensus 579 ~L~~LdLs~N~l~~~~p~~l--~~l~~L~~L~Ls~N~l~-~~~p~~~~--------~l~~L~~L~Ls~N~l~~~~p~--- 644 (779)
.+++|+.+.|.+.|+.-... ..-+..+.+++..-.-. ...+.... .-.-+..+.++.|++....-.
T Consensus 355 R~q~l~~rdnnldgeg~~vgk~~~s~s~r~l~agrs~~kqvm~s~~~a~~v~k~~~~~g~l~el~ls~~~lka~l~s~in 434 (553)
T KOG4242|consen 355 RVQVLLQRDNNLDGEGGAVGKRKQSKSGRILKAGRSGDKQVMDSSTEAPPVSKKSRTHGVLAELSLSPGPLKAGLESAIN 434 (553)
T ss_pred eeeEeeccccccccccccccceeeccccccccccccCCceeccccccchhhhhhhcccccccCcccCCCcccccHHHHHH
Confidence 47778888888876554332 33455666666543320 01111111 112356666777766532222
Q ss_pred hhhhcccCcEEEccCCcC
Q 046050 645 QLVELYALAIFSVAHNNL 662 (779)
Q Consensus 645 ~l~~l~~L~~L~ls~N~l 662 (779)
.+..-+.+..|++++|.-
T Consensus 435 ~l~stqtl~kldisgn~m 452 (553)
T KOG4242|consen 435 KLLSTQTLAKLDISGNGM 452 (553)
T ss_pred hhccCcccccccccCCCc
Confidence 222335677777777754
No 88
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=75.21 E-value=2.6 Score=25.14 Aligned_cols=14 Identities=43% Similarity=0.650 Sum_probs=6.8
Q ss_pred CCCCEEeCCCCcCc
Q 046050 106 TSLRILDIASNQIT 119 (779)
Q Consensus 106 ~~L~~L~Ls~n~i~ 119 (779)
++|+.|+|+.|+|+
T Consensus 2 ~~L~~L~L~~NkI~ 15 (26)
T smart00365 2 TNLEELDLSQNKIK 15 (26)
T ss_pred CccCEEECCCCccc
Confidence 34455555555444
No 89
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=74.86 E-value=0.42 Score=44.64 Aligned_cols=80 Identities=14% Similarity=0.128 Sum_probs=46.5
Q ss_pred CCcEEEccCcccccccChhccCCCCCCEEeCCCCcCcccCCchhhc-CCCCCCEEEccccc-ccccCCcccccCCCCCcE
Q 046050 83 HLQELHIGYNNIGGTLPWCLVNMTSLRILDIASNQITGNISSSPLR-YLTSLEELRVSNNQ-FQIPISFEPFFNHSKLKK 160 (779)
Q Consensus 83 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~i~~~~~~-~l~~L~~L~Ls~n~-l~~~~~~~~~~~l~~L~~ 160 (779)
.++.+|-++..|..+.-+.+.+++.++.|.+.++.--+..--..++ -.++|+.|++++|. || +.....+.++++|+.
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT-~~GL~~L~~lknLr~ 180 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRIT-DGGLACLLKLKNLRR 180 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeec-hhHHHHHHHhhhhHH
Confidence 4677888888877776677777888888877777532111110122 23778888888764 43 222233444455554
Q ss_pred EEC
Q 046050 161 FYG 163 (779)
Q Consensus 161 L~l 163 (779)
|.+
T Consensus 181 L~l 183 (221)
T KOG3864|consen 181 LHL 183 (221)
T ss_pred HHh
Confidence 443
No 90
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=67.91 E-value=3.8 Score=24.35 Aligned_cols=18 Identities=33% Similarity=0.624 Sum_probs=12.4
Q ss_pred CCCCEEeCCCCcCcccCCc
Q 046050 106 TSLRILDIASNQITGNISS 124 (779)
Q Consensus 106 ~~L~~L~Ls~n~i~~~i~~ 124 (779)
++|+.|+.++|+++ .+|+
T Consensus 2 ~~L~~L~vs~N~Lt-~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLT-SLPE 19 (26)
T ss_pred cccceeecCCCccc-cCcc
Confidence 35677777777777 6665
No 91
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=66.29 E-value=2.5 Score=54.79 Aligned_cols=37 Identities=16% Similarity=0.096 Sum_probs=34.0
Q ss_pred ECCCCcCcCCCchhhhhcccCcEEEccCCcCcccCCC
Q 046050 632 DLSYNMLQGKIPTQLVELYALAIFSVAHNNLSGKVPD 668 (779)
Q Consensus 632 ~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 668 (779)
||++|+|+.+.+..|..+++|+.|+|++|++.|.|.-
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CDC~L 37 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECDCGL 37 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCcccccccc
Confidence 6899999988888999999999999999999998875
No 92
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=65.54 E-value=3.9 Score=53.17 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=31.1
Q ss_pred EcCCCcCCccCchhhhCCCCCCEEECCCCcCcCC
Q 046050 608 NLSHNNLMGTIPSTFSHLSQIESLDLSYNMLQGK 641 (779)
Q Consensus 608 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 641 (779)
||++|+|+.+.+..|..+++|+.|+|++|++...
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~CD 34 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFECD 34 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccccc
Confidence 6899999988889999999999999999999853
No 93
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=62.35 E-value=6.3 Score=23.89 Aligned_cols=14 Identities=43% Similarity=0.546 Sum_probs=9.2
Q ss_pred CCCCEEECCCCcCc
Q 046050 626 SQIESLDLSYNMLQ 639 (779)
Q Consensus 626 ~~L~~L~Ls~N~l~ 639 (779)
++|++|||++|.+.
T Consensus 2 ~~L~~LdL~~N~i~ 15 (28)
T smart00368 2 PSLRELDLSNNKLG 15 (28)
T ss_pred CccCEEECCCCCCC
Confidence 45667777777665
No 94
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=47.55 E-value=12 Score=24.86 Aligned_cols=10 Identities=0% Similarity=0.351 Sum_probs=4.1
Q ss_pred eeeeehhhhh
Q 046050 723 ITFIISYVIV 732 (779)
Q Consensus 723 ~~~~~~~~~~ 732 (779)
.++++.++++
T Consensus 15 ~~VvVPV~vI 24 (40)
T PF08693_consen 15 VGVVVPVGVI 24 (40)
T ss_pred EEEEechHHH
Confidence 3444444333
No 95
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=47.40 E-value=7.3 Score=42.39 Aligned_cols=13 Identities=38% Similarity=0.460 Sum_probs=7.8
Q ss_pred cccEEEccCCcCC
Q 046050 307 SLQILALSNNSLQ 319 (779)
Q Consensus 307 ~L~~L~ls~n~l~ 319 (779)
.|++|.+.+|.+.
T Consensus 271 ~Leel~l~GNPlc 283 (585)
T KOG3763|consen 271 PLEELVLEGNPLC 283 (585)
T ss_pred CHHHeeecCCccc
Confidence 3666666666554
No 96
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=41.92 E-value=18 Score=21.28 Aligned_cols=11 Identities=45% Similarity=0.782 Sum_probs=5.3
Q ss_pred CCCcEEeCCCC
Q 046050 15 PNLETLELRDY 25 (779)
Q Consensus 15 ~~L~~L~Ls~~ 25 (779)
++|++|+|++|
T Consensus 2 ~~L~~L~l~~C 12 (26)
T smart00367 2 PNLRELDLSGC 12 (26)
T ss_pred CCCCEeCCCCC
Confidence 44444444444
No 97
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=41.38 E-value=21 Score=39.02 Aligned_cols=67 Identities=27% Similarity=0.163 Sum_probs=33.2
Q ss_pred hcCCCCCEEECcCCcccccCCC--CCCCCCCccEEEccCC--CCCcCCchhhhhcCCCCCEEEccCCcCCcc
Q 046050 227 ENNKELETLLLANNSLSGFFQM--PVNPLKQLTTIDVSKN--FIQGHIPTGIGAFLPRLEHFNISRNVLNGS 294 (779)
Q Consensus 227 ~~~~~L~~L~L~~n~~~~~~~~--~l~~l~~L~~L~Ls~n--~l~~~i~~~~~~~l~~L~~L~l~~n~l~~~ 294 (779)
.+.+.+..+.|++|++...... --...++|+.|+|++| .+. ..++.--.....|++|-+.+|++...
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~-~~~el~K~k~l~Leel~l~GNPlc~t 285 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKIS-SESELDKLKGLPLEELVLEGNPLCTT 285 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhc-chhhhhhhcCCCHHHeeecCCccccc
Confidence 3445566666666665433111 1123466677777776 332 11111111134567777777776643
No 98
>PF15102 TMEM154: TMEM154 protein family
Probab=37.23 E-value=15 Score=32.48 Aligned_cols=19 Identities=11% Similarity=0.260 Sum_probs=9.5
Q ss_pred hhhhhhhhhhhhccchhhH
Q 046050 731 IVILGIFGVLYVNPYWRRR 749 (779)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~ 749 (779)
++++++++++++++|||.+
T Consensus 70 lLLl~vV~lv~~~kRkr~K 88 (146)
T PF15102_consen 70 LLLLSVVCLVIYYKRKRTK 88 (146)
T ss_pred HHHHHHHHheeEEeecccC
Confidence 3334445555555666653
No 99
>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region. The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].
Probab=27.74 E-value=33 Score=30.63 Aligned_cols=7 Identities=14% Similarity=0.406 Sum_probs=3.0
Q ss_pred eeeeehh
Q 046050 723 ITFIISY 729 (779)
Q Consensus 723 ~~~~~~~ 729 (779)
+++++|+
T Consensus 52 IGvVVGV 58 (154)
T PF04478_consen 52 IGVVVGV 58 (154)
T ss_pred EEEEecc
Confidence 3444443
No 100
>PHA02898 virion envelope protein; Provisional
Probab=26.48 E-value=33 Score=27.10 Aligned_cols=20 Identities=30% Similarity=0.747 Sum_probs=13.3
Q ss_pred eeeehhhhhhhhhhhhhhhc
Q 046050 724 TFIISYVIVILGIFGVLYVN 743 (779)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~ 743 (779)
.-+++|+++.+..+++++|.
T Consensus 47 lSii~FIlgivl~lG~~ifs 66 (92)
T PHA02898 47 ISIISFILAIILILGIIFFK 66 (92)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34567777777777777764
No 101
>PF07204 Orthoreo_P10: Orthoreovirus membrane fusion protein p10; InterPro: IPR009854 This family consists of several Orthoreovirus membrane fusion protein p10 sequences. p10 is thought to be a multifunctional protein that plays a key role in virus-host interaction [].
Probab=26.08 E-value=25 Score=28.15 Aligned_cols=29 Identities=10% Similarity=-0.016 Sum_probs=14.8
Q ss_pred ceeeeeeeehhhhhhhhhhhhhhhccchh
Q 046050 719 GSFYITFIISYVIVILGIFGVLYVNPYWR 747 (779)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (779)
.|.|++.+.++++++++++.+.+.+.+|+
T Consensus 41 yWpyLA~GGG~iLilIii~Lv~CC~~K~K 69 (98)
T PF07204_consen 41 YWPYLAAGGGLILILIIIALVCCCRAKHK 69 (98)
T ss_pred hhHHhhccchhhhHHHHHHHHHHhhhhhh
Confidence 34555666666555555444444444444
No 102
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=23.09 E-value=22 Score=30.72 Aligned_cols=18 Identities=17% Similarity=0.325 Sum_probs=7.4
Q ss_pred eeeehhhhhhhhhhhhhh
Q 046050 724 TFIISYVIVILGIFGVLY 741 (779)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~ 741 (779)
++++|+++|+++++.+++
T Consensus 68 ~Ii~gv~aGvIg~Illi~ 85 (122)
T PF01102_consen 68 GIIFGVMAGVIGIILLIS 85 (122)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred ehhHHHHHHHHHHHHHHH
Confidence 334444444444333333
No 103
>PHA03048 IMV membrane protein; Provisional
Probab=23.09 E-value=44 Score=26.54 Aligned_cols=20 Identities=25% Similarity=0.310 Sum_probs=13.0
Q ss_pred eeeehhhhhhhhhhhhhhhc
Q 046050 724 TFIISYVIVILGIFGVLYVN 743 (779)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~ 743 (779)
..+++|+++.+..++++.|.
T Consensus 46 lsii~FIlgivl~lG~~ifs 65 (93)
T PHA03048 46 LSGIAFVLGIVMTIGMLIYS 65 (93)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34566777777767776664
No 104
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=21.90 E-value=53 Score=26.90 Aligned_cols=12 Identities=25% Similarity=0.520 Sum_probs=5.4
Q ss_pred eeeehhhhhhhh
Q 046050 724 TFIISYVIVILG 735 (779)
Q Consensus 724 ~~~~~~~~~~~~ 735 (779)
.|.+|++++.++
T Consensus 18 ~~LVGVv~~al~ 29 (102)
T PF15176_consen 18 PFLVGVVVTALV 29 (102)
T ss_pred HhHHHHHHHHHH
Confidence 344444444444
Done!