Query 046053
Match_columns 199
No_of_seqs 112 out of 1182
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 14:18:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046053.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046053hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 5.1E-30 1.7E-34 225.2 15.0 171 6-199 11-184 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.4E-27 1.2E-31 208.4 17.9 192 1-198 1-192 (482)
3 2vch_A Hydroquinone glucosyltr 99.9 1.9E-23 6.6E-28 184.5 18.4 154 6-175 4-161 (480)
4 2c1x_A UDP-glucose flavonoid 3 99.9 3.2E-23 1.1E-27 182.0 17.2 157 1-171 1-159 (456)
5 2acv_A Triterpene UDP-glucosyl 99.9 4.1E-23 1.4E-27 181.5 15.7 151 1-169 1-159 (463)
6 2iya_A OLEI, oleandomycin glyc 99.8 6.5E-18 2.2E-22 145.5 15.2 129 8-156 12-141 (424)
7 4amg_A Snogd; transferase, pol 99.7 1.1E-16 3.8E-21 136.1 12.5 134 7-157 21-161 (400)
8 1iir_A Glycosyltransferase GTF 99.6 5.8E-15 2E-19 127.0 13.6 124 9-155 1-127 (415)
9 3ia7_A CALG4; glycosysltransfe 99.6 2.1E-14 7.1E-19 121.8 14.0 126 9-154 5-133 (402)
10 2iyf_A OLED, oleandomycin glyc 99.6 4.8E-14 1.6E-18 121.3 13.9 129 8-156 7-136 (430)
11 1rrv_A Glycosyltransferase GTF 99.5 7.2E-14 2.5E-18 120.1 12.5 124 9-155 1-128 (416)
12 3rsc_A CALG2; TDP, enediyne, s 99.5 6E-14 2.1E-18 120.0 11.7 129 7-155 19-150 (415)
13 2p6p_A Glycosyl transferase; X 99.4 3.3E-12 1.1E-16 108.1 14.0 128 9-155 1-138 (384)
14 2yjn_A ERYCIII, glycosyltransf 99.4 2.6E-12 8.9E-17 111.2 13.2 131 8-155 20-175 (441)
15 3oti_A CALG3; calicheamicin, T 99.4 4.2E-12 1.4E-16 108.2 14.1 123 7-154 19-160 (398)
16 4fzr_A SSFS6; structural genom 99.3 9E-12 3.1E-16 106.1 12.0 131 6-155 13-154 (398)
17 3h4t_A Glycosyltransferase GTF 99.3 5.7E-12 1.9E-16 108.2 8.2 124 9-156 1-127 (404)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.3 3.1E-11 1.1E-15 102.3 12.2 130 8-155 1-145 (391)
19 3otg_A CALG1; calicheamicin, T 99.1 2.3E-10 7.9E-15 97.3 11.1 130 5-155 17-161 (412)
20 3s2u_A UDP-N-acetylglucosamine 98.8 5.2E-08 1.8E-12 82.6 13.1 117 8-151 2-121 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 98.2 3.1E-05 1E-09 64.2 13.1 119 8-153 6-127 (364)
22 3c48_A Predicted glycosyltrans 96.4 0.02 6.7E-07 48.3 9.9 41 7-47 19-70 (438)
23 3fro_A GLGA glycogen synthase; 96.2 0.094 3.2E-06 43.7 12.8 39 8-46 2-45 (439)
24 3okp_A GDP-mannose-dependent a 94.6 0.23 8E-06 40.6 9.8 110 7-154 3-118 (394)
25 2jjm_A Glycosyl transferase, g 94.4 0.81 2.8E-05 37.7 12.7 40 7-46 14-54 (394)
26 1v4v_A UDP-N-acetylglucosamine 93.1 1.3 4.3E-05 36.2 11.5 37 9-46 6-43 (376)
27 1vgv_A UDP-N-acetylglucosamine 90.0 1.9 6.5E-05 35.1 9.4 36 9-45 1-37 (384)
28 2x0d_A WSAF; GT4 family, trans 89.1 0.34 1.2E-05 41.1 4.2 42 5-46 43-89 (413)
29 2r60_A Glycosyl transferase, g 88.8 0.48 1.7E-05 40.6 5.0 39 8-46 7-60 (499)
30 1psw_A ADP-heptose LPS heptosy 88.8 4.8 0.00017 32.4 10.9 103 9-151 1-107 (348)
31 1g5t_A COB(I)alamin adenosyltr 88.6 6.7 0.00023 29.9 11.2 100 7-135 27-131 (196)
32 2iuy_A Avigt4, glycosyltransfe 88.0 0.73 2.5E-05 37.1 5.3 39 8-46 3-57 (342)
33 2iw1_A Lipopolysaccharide core 87.7 0.54 1.8E-05 38.2 4.4 37 10-46 2-41 (374)
34 3beo_A UDP-N-acetylglucosamine 86.1 12 0.0004 30.1 12.0 39 8-47 8-48 (375)
35 2gek_A Phosphatidylinositol ma 85.3 1.2 4.2E-05 36.4 5.4 42 7-48 19-64 (406)
36 2x6q_A Trehalose-synthase TRET 85.3 1.5 5.2E-05 36.3 6.0 41 7-47 39-81 (416)
37 3vue_A GBSS-I, granule-bound s 83.8 1.1 3.7E-05 39.5 4.6 40 5-44 6-51 (536)
38 3s28_A Sucrose synthase 1; gly 82.9 5.3 0.00018 37.1 9.0 31 123-153 406-438 (816)
39 1rzu_A Glycogen synthase 1; gl 82.0 1.7 5.7E-05 36.9 5.0 38 9-46 1-44 (485)
40 2qzs_A Glycogen synthase; glyc 80.5 2.1 7.1E-05 36.3 5.0 38 9-46 1-44 (485)
41 3cio_A ETK, tyrosine-protein k 80.2 9.6 0.00033 30.6 8.8 40 8-47 103-144 (299)
42 2wqk_A 5'-nucleotidase SURE; S 78.8 6 0.0002 31.4 6.9 24 25-49 17-40 (251)
43 1y80_A Predicted cobalamin bin 77.2 3.3 0.00011 31.5 4.8 45 7-51 87-131 (210)
44 2yxb_A Coenzyme B12-dependent 75.7 2.6 8.8E-05 31.0 3.7 44 6-49 16-59 (161)
45 3bfv_A CAPA1, CAPB2, membrane 75.1 28 0.00097 27.3 12.9 41 7-47 80-122 (271)
46 1ccw_A Protein (glutamate muta 75.0 3.6 0.00012 29.3 4.2 44 8-51 3-46 (137)
47 2i2x_B MTAC, methyltransferase 74.2 3.7 0.00013 32.5 4.5 43 6-48 121-163 (258)
48 3hbm_A UDP-sugar hydrolase; PS 73.5 11 0.00039 30.2 7.3 27 16-46 12-38 (282)
49 3ezx_A MMCP 1, monomethylamine 73.1 4.7 0.00016 31.1 4.8 46 6-51 90-135 (215)
50 4hwg_A UDP-N-acetylglucosamine 70.9 6.4 0.00022 32.9 5.5 39 105-152 84-124 (385)
51 3tov_A Glycosyl transferase fa 70.8 41 0.0014 27.3 11.0 104 7-150 7-115 (349)
52 3qjg_A Epidermin biosynthesis 70.4 7.7 0.00026 29.0 5.2 42 7-49 4-45 (175)
53 2lpm_A Two-component response 68.8 3.9 0.00013 28.6 3.1 29 123-151 52-85 (123)
54 3to5_A CHEY homolog; alpha(5)b 68.0 6.1 0.00021 27.9 4.1 33 123-155 56-97 (134)
55 1id1_A Putative potassium chan 66.9 6.5 0.00022 27.9 4.1 33 8-45 3-35 (153)
56 1kjn_A MTH0777; hypotethical p 64.8 12 0.00042 27.4 5.1 45 10-54 9-54 (157)
57 3gl9_A Response regulator; bet 64.7 12 0.0004 24.9 5.0 44 107-156 35-87 (122)
58 2hy7_A Glucuronosyltransferase 64.3 4.4 0.00015 33.9 3.1 37 7-45 13-52 (406)
59 3zqu_A Probable aromatic acid 61.2 14 0.00049 28.3 5.3 43 8-51 4-46 (209)
60 2q5c_A NTRC family transcripti 60.8 13 0.00043 28.1 4.9 49 105-162 129-177 (196)
61 1pq4_A Periplasmic binding pro 60.8 22 0.00075 28.5 6.6 56 105-166 224-281 (291)
62 2r8r_A Sensor protein; KDPD, P 60.5 16 0.00055 28.5 5.5 41 6-46 4-44 (228)
63 3la6_A Tyrosine-protein kinase 59.6 64 0.0022 25.5 12.1 40 8-47 91-132 (286)
64 1lss_A TRK system potassium up 59.4 13 0.00045 25.2 4.5 34 8-46 4-37 (140)
65 1mvl_A PPC decarboxylase athal 58.1 16 0.00056 28.0 5.1 41 8-50 19-59 (209)
66 3zzm_A Bifunctional purine bio 57.6 19 0.00067 31.5 6.0 115 1-140 1-117 (523)
67 3dzc_A UDP-N-acetylglucosamine 56.6 12 0.00042 31.1 4.6 29 124-152 111-142 (396)
68 3t6k_A Response regulator rece 55.0 20 0.00068 24.2 4.8 33 123-155 47-88 (136)
69 3p9x_A Phosphoribosylglycinami 54.8 22 0.00074 27.4 5.3 49 105-155 14-62 (211)
70 4g6h_A Rotenone-insensitive NA 53.8 9.1 0.00031 33.2 3.4 36 6-46 40-75 (502)
71 3lyu_A Putative hydrogenase; t 53.4 9.5 0.00032 27.0 2.9 36 9-47 19-54 (142)
72 3mc3_A DSRE/DSRF-like family p 51.9 28 0.00097 24.3 5.2 42 8-49 15-59 (134)
73 3m6m_D Sensory/regulatory prot 51.3 17 0.0006 24.8 4.0 33 123-155 57-100 (143)
74 1sbz_A Probable aromatic acid 51.3 22 0.00074 27.1 4.8 42 10-52 2-44 (197)
75 3bul_A Methionine synthase; tr 50.9 18 0.00061 32.3 4.8 45 7-51 97-141 (579)
76 3f6p_A Transcriptional regulat 50.8 29 0.001 22.6 5.0 34 123-156 45-84 (120)
77 3p0j_A Tyrosyl-tRNA synthetase 50.5 26 0.0009 31.9 5.9 45 4-48 378-427 (690)
78 3ot5_A UDP-N-acetylglucosamine 48.4 20 0.00068 29.9 4.6 38 106-152 105-145 (403)
79 4b4o_A Epimerase family protei 47.5 11 0.00039 29.5 2.8 32 9-44 1-32 (298)
80 3gi1_A LBP, laminin-binding pr 47.2 42 0.0014 26.7 6.1 44 105-154 215-260 (286)
81 3kkj_A Amine oxidase, flavin-c 47.0 11 0.00036 27.8 2.4 18 26-43 15-32 (336)
82 4ds3_A Phosphoribosylglycinami 46.8 30 0.001 26.5 5.0 46 106-153 20-65 (209)
83 1dbw_A Transcriptional regulat 46.7 48 0.0016 21.6 5.6 33 123-155 46-85 (126)
84 2pju_A Propionate catabolism o 46.1 34 0.0012 26.4 5.2 41 104-153 140-180 (225)
85 3q9l_A Septum site-determining 45.8 93 0.0032 23.3 10.9 31 16-46 11-41 (260)
86 4g65_A TRK system potassium up 45.6 11 0.00036 32.5 2.5 36 6-46 1-36 (461)
87 3qxc_A Dethiobiotin synthetase 44.7 68 0.0023 24.9 6.9 35 10-44 22-58 (242)
88 3oy2_A Glycosyltransferase B73 44.7 28 0.00095 28.3 4.9 37 9-46 1-40 (413)
89 3eag_A UDP-N-acetylmuramate:L- 44.5 26 0.00087 28.4 4.5 34 8-45 4-37 (326)
90 2ejb_A Probable aromatic acid 44.5 34 0.0012 25.7 4.9 43 9-52 2-44 (189)
91 3lrx_A Putative hydrogenase; a 44.5 15 0.0005 26.5 2.8 37 9-48 24-60 (158)
92 1meo_A Phosophoribosylglycinam 43.7 39 0.0013 25.7 5.2 31 124-154 29-59 (209)
93 3tqr_A Phosphoribosylglycinami 43.1 36 0.0012 26.1 4.9 31 124-154 33-63 (215)
94 3cx3_A Lipoprotein; zinc-bindi 42.4 38 0.0013 26.9 5.2 55 105-165 213-275 (284)
95 3vot_A L-amino acid ligase, BL 42.2 1.4E+02 0.0049 24.5 10.2 26 123-148 74-101 (425)
96 3gt7_A Sensor protein; structu 42.1 43 0.0015 23.0 5.0 33 123-155 50-91 (154)
97 4ehi_A Bifunctional purine bio 41.6 36 0.0012 29.9 5.1 30 22-53 34-63 (534)
98 4hb9_A Similarities with proba 41.5 20 0.0007 29.0 3.5 29 9-42 2-30 (412)
99 1p3y_1 MRSD protein; flavoprot 41.0 31 0.0011 26.0 4.2 41 8-49 8-48 (194)
100 4gbj_A 6-phosphogluconate dehy 40.3 26 0.00087 28.1 3.8 34 6-44 3-36 (297)
101 3kcq_A Phosphoribosylglycinami 39.5 39 0.0013 26.0 4.6 46 106-153 21-66 (215)
102 3c3m_A Response regulator rece 39.0 48 0.0016 22.1 4.7 32 123-154 46-86 (138)
103 1g63_A Epidermin modifying enz 38.9 37 0.0013 25.3 4.3 40 9-49 3-42 (181)
104 2prs_A High-affinity zinc upta 38.5 53 0.0018 26.0 5.4 46 105-156 210-257 (284)
105 2qr3_A Two-component system re 38.4 59 0.002 21.4 5.1 33 123-155 46-90 (140)
106 2gt1_A Lipopolysaccharide hept 38.0 58 0.002 25.7 5.7 43 9-51 1-45 (326)
107 2o1e_A YCDH; alpha-beta protei 37.6 66 0.0023 25.9 6.0 44 105-154 226-271 (312)
108 3lqk_A Dipicolinate synthase s 37.6 42 0.0014 25.5 4.5 40 8-48 7-47 (201)
109 3kjh_A CO dehydrogenase/acetyl 37.5 34 0.0012 25.6 4.0 37 10-46 2-38 (254)
110 2rjn_A Response regulator rece 37.4 55 0.0019 22.2 4.9 33 123-155 50-89 (154)
111 3of5_A Dethiobiotin synthetase 37.0 49 0.0017 25.3 4.9 29 16-44 13-41 (228)
112 3fwz_A Inner membrane protein 36.9 24 0.00081 24.5 2.8 38 6-48 5-42 (140)
113 1tmy_A CHEY protein, TMY; chem 36.8 55 0.0019 20.9 4.6 32 124-155 47-85 (120)
114 3cg0_A Response regulator rece 36.8 45 0.0015 22.1 4.2 33 124-156 54-93 (140)
115 1qzu_A Hypothetical protein MD 36.6 49 0.0017 25.2 4.7 42 7-49 18-60 (206)
116 3kht_A Response regulator; PSI 36.4 89 0.003 20.7 5.8 44 106-155 39-91 (144)
117 3lte_A Response regulator; str 36.3 65 0.0022 21.0 5.0 35 123-157 49-91 (132)
118 3a10_A Response regulator; pho 36.2 72 0.0025 20.2 5.1 32 123-154 44-82 (116)
119 3mcu_A Dipicolinate synthase, 36.1 36 0.0012 26.0 3.9 39 9-48 6-45 (207)
120 2gk4_A Conserved hypothetical 35.8 28 0.00095 27.2 3.2 26 19-46 28-53 (232)
121 3h1g_A Chemotaxis protein CHEY 35.6 71 0.0024 20.9 5.1 33 123-155 50-91 (129)
122 2rdm_A Response regulator rece 35.5 69 0.0024 20.8 5.0 33 124-156 50-90 (132)
123 2qxy_A Response regulator; reg 35.2 60 0.0021 21.6 4.7 32 123-155 47-85 (142)
124 3nhm_A Response regulator; pro 35.0 75 0.0026 20.7 5.2 33 123-155 46-87 (133)
125 1jx7_A Hypothetical protein YC 34.7 83 0.0029 20.6 5.3 38 12-49 6-47 (117)
126 3grc_A Sensor protein, kinase; 34.7 60 0.002 21.5 4.6 32 123-154 49-89 (140)
127 4e7p_A Response regulator; DNA 34.7 68 0.0023 21.7 5.0 44 106-155 54-104 (150)
128 2qzj_A Two-component response 34.2 58 0.002 21.7 4.5 33 123-155 47-85 (136)
129 1yio_A Response regulatory pro 34.1 60 0.002 23.4 4.8 33 123-155 47-86 (208)
130 3rqi_A Response regulator prot 34.0 41 0.0014 24.0 3.8 43 107-155 40-89 (184)
131 2a9o_A Response regulator; ess 33.8 58 0.002 20.7 4.3 33 124-156 45-83 (120)
132 3eod_A Protein HNR; response r 33.7 65 0.0022 21.0 4.6 43 107-155 40-89 (130)
133 3kto_A Response regulator rece 33.6 43 0.0015 22.3 3.7 34 123-156 49-91 (136)
134 3cu5_A Two component transcrip 33.4 61 0.0021 21.7 4.5 32 123-154 48-86 (141)
135 2g1u_A Hypothetical protein TM 33.3 55 0.0019 22.8 4.4 35 7-46 18-52 (155)
136 4dzz_A Plasmid partitioning pr 33.0 61 0.0021 23.4 4.7 32 16-47 10-41 (206)
137 2hy5_A Putative sulfurtransfer 32.6 73 0.0025 21.8 4.8 38 12-49 5-45 (130)
138 3b2n_A Uncharacterized protein 32.5 51 0.0017 21.8 3.9 32 124-155 49-87 (133)
139 1srr_A SPO0F, sporulation resp 32.4 52 0.0018 21.3 3.9 32 124-155 47-85 (124)
140 4as2_A Phosphorylcholine phosp 32.3 33 0.0011 28.0 3.3 25 22-46 145-169 (327)
141 3ius_A Uncharacterized conserv 32.2 60 0.0021 24.8 4.8 34 8-46 5-38 (286)
142 1xhf_A DYE resistance, aerobic 32.2 99 0.0034 19.7 5.4 34 123-156 46-85 (123)
143 3dm5_A SRP54, signal recogniti 32.0 71 0.0024 27.3 5.5 41 8-48 100-140 (443)
144 1jkx_A GART;, phosphoribosylgl 31.9 73 0.0025 24.2 5.0 47 106-154 13-59 (212)
145 2pl1_A Transcriptional regulat 31.7 86 0.0029 19.9 4.9 34 123-156 43-83 (121)
146 1byi_A Dethiobiotin synthase; 31.7 62 0.0021 23.9 4.6 32 11-42 4-36 (224)
147 3hv2_A Response regulator/HD d 31.6 57 0.0019 22.2 4.2 33 123-155 57-96 (153)
148 2x5n_A SPRPN10, 26S proteasome 31.5 1E+02 0.0034 22.8 5.7 34 11-44 110-143 (192)
149 2vsy_A XCC0866; transferase, g 31.3 73 0.0025 27.2 5.6 40 6-45 203-246 (568)
150 1jbe_A Chemotaxis protein CHEY 31.2 92 0.0032 20.0 5.1 32 123-154 48-88 (128)
151 1p6q_A CHEY2; chemotaxis, sign 30.7 68 0.0023 20.8 4.3 22 123-144 50-73 (129)
152 3ty2_A 5'-nucleotidase SURE; s 30.7 54 0.0018 26.1 4.2 48 1-50 4-51 (261)
153 1zgz_A Torcad operon transcrip 30.6 72 0.0025 20.4 4.4 33 123-155 45-83 (122)
154 1wcv_1 SOJ, segregation protei 30.6 52 0.0018 25.2 4.1 40 8-47 5-46 (257)
155 3ihm_A Styrene monooxygenase A 30.6 29 0.00098 29.1 2.7 34 7-45 21-54 (430)
156 3of5_A Dethiobiotin synthetase 30.5 94 0.0032 23.6 5.6 46 105-157 97-152 (228)
157 3crn_A Response regulator rece 30.5 73 0.0025 20.9 4.5 33 123-155 46-85 (132)
158 2hy5_B Intracellular sulfur ox 30.4 84 0.0029 22.0 4.9 40 10-49 8-49 (136)
159 3cz5_A Two-component response 30.4 1E+02 0.0035 20.7 5.4 33 123-155 50-89 (153)
160 2d1p_A TUSD, hypothetical UPF0 30.3 68 0.0023 22.7 4.3 38 11-48 16-56 (140)
161 2jk1_A HUPR, hydrogenase trans 30.2 76 0.0026 21.0 4.6 33 123-155 43-82 (139)
162 2ywr_A Phosphoribosylglycinami 30.2 83 0.0028 23.9 5.1 31 124-154 30-60 (216)
163 2qs7_A Uncharacterized protein 30.1 72 0.0025 22.5 4.5 42 12-53 12-53 (144)
164 3q9s_A DNA-binding response re 29.9 79 0.0027 23.9 5.0 33 123-155 80-118 (249)
165 1byi_A Dethiobiotin synthase; 29.7 1.6E+02 0.0056 21.4 7.3 47 105-158 96-151 (224)
166 1z82_A Glycerol-3-phosphate de 29.7 42 0.0014 27.0 3.5 34 7-45 13-46 (335)
167 1mb3_A Cell division response 29.5 56 0.0019 21.0 3.6 30 124-153 45-83 (124)
168 3ew7_A LMO0794 protein; Q8Y8U8 29.3 35 0.0012 24.9 2.8 21 26-46 14-34 (221)
169 1y42_X Tyrosyl-tRNA synthetase 29.2 46 0.0016 28.0 3.7 28 19-47 80-107 (392)
170 2etv_A Iron(III) ABC transport 29.1 69 0.0023 25.9 4.8 30 124-153 96-126 (346)
171 3bbn_B Ribosomal protein S2; s 29.1 42 0.0015 26.1 3.3 32 124-155 157-190 (231)
172 1xrs_B D-lysine 5,6-aminomutas 28.7 46 0.0016 26.4 3.5 45 7-51 119-172 (262)
173 1qkk_A DCTD, C4-dicarboxylate 28.6 81 0.0028 21.3 4.5 34 123-156 46-86 (155)
174 1yde_A Retinal dehydrogenase/r 28.4 76 0.0026 24.5 4.8 42 1-45 1-42 (270)
175 1xjc_A MOBB protein homolog; s 28.2 95 0.0033 22.6 5.0 38 9-46 5-42 (169)
176 2ts1_A Tyrosyl-tRNA synthetase 28.2 59 0.002 27.6 4.3 28 19-47 46-73 (419)
177 3ug7_A Arsenical pump-driving 28.0 1E+02 0.0034 25.1 5.6 39 9-47 26-65 (349)
178 3e8x_A Putative NAD-dependent 27.9 38 0.0013 25.3 2.8 21 26-46 35-55 (236)
179 3auf_A Glycinamide ribonucleot 27.8 77 0.0026 24.4 4.6 32 124-155 51-82 (229)
180 2gkg_A Response regulator homo 27.8 69 0.0024 20.5 3.9 31 124-155 49-89 (127)
181 3av3_A Phosphoribosylglycinami 27.6 96 0.0033 23.5 5.1 32 124-155 32-63 (212)
182 3c97_A Signal transduction his 27.3 1.1E+02 0.0037 20.2 5.0 21 123-143 53-75 (140)
183 3d3k_A Enhancer of mRNA-decapp 27.2 42 0.0014 26.5 3.0 34 9-44 86-120 (259)
184 1p9o_A Phosphopantothenoylcyst 27.2 35 0.0012 27.9 2.6 26 20-47 65-90 (313)
185 3h2s_A Putative NADH-flavin re 27.1 40 0.0014 24.7 2.8 21 26-46 14-34 (224)
186 3ppi_A 3-hydroxyacyl-COA dehyd 27.0 84 0.0029 24.2 4.8 35 8-45 29-63 (281)
187 3r8n_B 30S ribosomal protein S 27.0 52 0.0018 25.4 3.4 32 124-155 149-182 (218)
188 3s40_A Diacylglycerol kinase; 26.9 1.2E+02 0.0042 23.9 5.9 47 1-47 3-50 (304)
189 4f0j_A Probable hydrolytic enz 26.7 77 0.0026 23.7 4.5 39 6-45 44-82 (315)
190 3k9g_A PF-32 protein; ssgcid, 26.7 81 0.0028 24.0 4.6 40 7-47 25-66 (267)
191 1jzt_A Hypothetical 27.5 kDa p 26.7 40 0.0014 26.4 2.8 35 9-45 59-94 (246)
192 1kgs_A DRRD, DNA binding respo 26.7 1.3E+02 0.0045 21.7 5.7 33 123-155 45-84 (225)
193 3cfy_A Putative LUXO repressor 26.6 95 0.0032 20.6 4.5 32 124-155 48-86 (137)
194 3fgn_A Dethiobiotin synthetase 26.6 1.8E+02 0.0062 22.5 6.7 60 105-171 114-183 (251)
195 3da8_A Probable 5'-phosphoribo 26.4 90 0.0031 23.9 4.7 28 124-152 40-67 (215)
196 1jil_A Tyrrs, tyrosyl-tRNA syn 26.3 56 0.0019 27.8 3.8 28 19-47 48-75 (420)
197 3h5i_A Response regulator/sens 26.3 1.2E+02 0.0043 19.9 5.1 32 123-154 49-87 (140)
198 3oz2_A Digeranylgeranylglycero 26.2 34 0.0012 27.3 2.4 18 26-43 17-34 (397)
199 3n0r_A Response regulator; sig 26.0 85 0.0029 24.6 4.7 32 123-154 204-242 (286)
200 3heb_A Response regulator rece 25.8 1.5E+02 0.005 19.9 5.5 34 123-156 58-100 (152)
201 1ys7_A Transcriptional regulat 25.8 96 0.0033 22.7 4.8 31 123-153 50-87 (233)
202 1u7z_A Coenzyme A biosynthesis 25.6 52 0.0018 25.4 3.2 20 26-45 38-57 (226)
203 3pdi_B Nitrogenase MOFE cofact 25.6 75 0.0026 27.1 4.5 25 124-151 375-399 (458)
204 3llv_A Exopolyphosphatase-rela 25.5 40 0.0014 23.0 2.4 33 9-46 7-39 (141)
205 3jte_A Response regulator rece 25.5 1.2E+02 0.0041 20.0 4.9 33 123-155 48-87 (143)
206 4b4t_W RPN10, 26S proteasome r 25.5 96 0.0033 24.6 4.8 37 8-44 107-144 (268)
207 1hdo_A Biliverdin IX beta redu 25.3 46 0.0016 23.9 2.8 20 26-45 17-36 (206)
208 3n0v_A Formyltetrahydrofolate 25.2 89 0.0031 25.0 4.6 45 105-153 102-146 (286)
209 3eul_A Possible nitrate/nitrit 25.0 78 0.0027 21.3 3.9 44 106-155 49-99 (152)
210 3d3j_A Enhancer of mRNA-decapp 25.0 47 0.0016 26.9 3.0 35 9-45 133-168 (306)
211 3ic5_A Putative saccharopine d 24.9 68 0.0023 20.6 3.4 34 8-46 5-39 (118)
212 3iqw_A Tail-anchored protein t 24.9 1E+02 0.0034 25.1 5.0 40 9-48 16-56 (334)
213 3mm4_A Histidine kinase homolo 24.9 78 0.0027 23.1 4.1 32 124-155 119-161 (206)
214 3n53_A Response regulator rece 24.8 65 0.0022 21.3 3.4 31 124-154 46-85 (140)
215 3lou_A Formyltetrahydrofolate 24.7 84 0.0029 25.2 4.4 45 105-153 107-151 (292)
216 1g3q_A MIND ATPase, cell divis 24.7 1E+02 0.0035 22.8 4.8 31 16-46 11-41 (237)
217 1i3c_A Response regulator RCP1 24.7 88 0.003 21.1 4.1 32 124-155 61-101 (149)
218 3fkq_A NTRC-like two-domain pr 24.7 93 0.0032 25.4 4.8 39 7-45 141-181 (373)
219 2j48_A Two-component sensor ki 24.6 1.1E+02 0.0037 19.0 4.3 33 124-156 45-86 (119)
220 3r0j_A Possible two component 24.5 81 0.0028 23.7 4.2 32 124-155 67-105 (250)
221 3hh8_A Metal ABC transporter s 24.5 84 0.0029 25.1 4.4 42 105-152 219-264 (294)
222 2qyt_A 2-dehydropantoate 2-red 24.5 42 0.0015 26.3 2.6 34 6-44 6-45 (317)
223 3hzh_A Chemotaxis response reg 24.5 84 0.0029 21.5 4.0 32 124-155 83-121 (157)
224 4hn9_A Iron complex transport 24.4 67 0.0023 25.7 3.8 31 124-154 116-146 (335)
225 1zh2_A KDP operon transcriptio 24.4 84 0.0029 19.9 3.8 33 124-156 45-83 (121)
226 1vdc_A NTR, NADPH dependent th 24.3 29 0.00098 27.4 1.5 33 7-44 7-39 (333)
227 2o8n_A APOA-I binding protein; 24.2 51 0.0018 26.1 3.0 35 9-45 80-115 (265)
228 1vi6_A 30S ribosomal protein S 24.0 74 0.0025 24.4 3.7 31 124-154 115-147 (208)
229 3eq2_A Probable two-component 23.7 97 0.0033 25.2 4.8 32 123-154 48-86 (394)
230 1a04_A Nitrate/nitrite respons 23.7 79 0.0027 22.9 3.9 31 124-154 51-88 (215)
231 3hwr_A 2-dehydropantoate 2-red 23.7 59 0.002 26.0 3.3 41 7-52 18-58 (318)
232 3dqp_A Oxidoreductase YLBE; al 23.4 49 0.0017 24.3 2.6 20 26-45 14-33 (219)
233 2bru_C NAD(P) transhydrogenase 23.4 84 0.0029 23.5 3.7 37 8-46 30-71 (186)
234 3op4_A 3-oxoacyl-[acyl-carrier 23.3 1.3E+02 0.0044 22.7 5.2 35 8-45 8-42 (248)
235 2g36_A Tryptophanyl-tRNA synth 23.2 53 0.0018 27.0 3.0 26 20-45 28-53 (340)
236 3end_A Light-independent proto 23.2 1.1E+02 0.0037 24.0 4.8 38 9-46 42-79 (307)
237 2oqr_A Sensory transduction pr 23.1 1.3E+02 0.0045 21.9 5.1 33 124-156 48-86 (230)
238 2b4a_A BH3024; flavodoxin-like 23.0 1.1E+02 0.0036 20.1 4.2 29 124-152 60-95 (138)
239 1eg2_A Modification methylase 23.0 1.3E+02 0.0045 24.2 5.4 62 106-175 231-294 (319)
240 3pdi_B Nitrogenase MOFE cofact 23.0 95 0.0033 26.5 4.7 41 123-163 237-278 (458)
241 2qv0_A Protein MRKE; structura 23.0 1.4E+02 0.0048 19.6 4.9 22 123-144 54-77 (143)
242 2ew2_A 2-dehydropantoate 2-red 23.0 65 0.0022 25.1 3.4 32 9-45 4-35 (316)
243 1vpd_A Tartronate semialdehyde 23.0 83 0.0028 24.5 4.1 34 7-45 4-37 (299)
244 3ksu_A 3-oxoacyl-acyl carrier 22.7 1.3E+02 0.0043 23.0 5.0 33 8-43 10-42 (262)
245 1tvm_A PTS system, galactitol- 22.6 1.8E+02 0.0061 19.4 5.3 38 7-44 20-58 (113)
246 2vrn_A Protease I, DR1199; cys 22.6 2.1E+02 0.0073 20.4 6.2 45 1-46 1-46 (190)
247 2xxa_A Signal recognition part 22.6 1.4E+02 0.0047 25.3 5.5 40 9-48 101-141 (433)
248 3qit_A CURM TE, polyketide syn 22.5 1.1E+02 0.0036 22.3 4.4 38 7-45 25-62 (286)
249 1ycd_A Hypothetical 27.3 kDa p 22.5 1.4E+02 0.0049 21.7 5.2 40 6-45 3-45 (243)
250 4dll_A 2-hydroxy-3-oxopropiona 22.4 1.1E+02 0.0038 24.3 4.8 34 8-46 31-64 (320)
251 3p32_A Probable GTPase RV1496/ 22.3 1.2E+02 0.004 24.6 4.9 42 6-47 77-118 (355)
252 3bch_A 40S ribosomal protein S 22.3 81 0.0028 24.9 3.7 31 124-154 151-183 (253)
253 2yxn_A Tyrosyl-tRNA synthetase 22.2 77 0.0026 25.7 3.8 26 20-46 50-75 (322)
254 1mxh_A Pteridine reductase 2; 22.2 1.1E+02 0.0036 23.4 4.5 33 9-44 11-43 (276)
255 2fuk_A XC6422 protein; A/B hyd 22.1 1.3E+02 0.0044 21.3 4.8 36 8-43 37-76 (220)
256 3sty_A Methylketone synthase 1 21.9 91 0.0031 22.7 4.0 38 6-44 10-47 (267)
257 3md9_A Hemin-binding periplasm 21.9 97 0.0033 23.4 4.2 29 124-152 59-89 (255)
258 2dkn_A 3-alpha-hydroxysteroid 21.7 62 0.0021 24.1 3.0 19 26-44 15-33 (255)
259 2ehd_A Oxidoreductase, oxidore 21.7 62 0.0021 24.0 3.0 32 11-45 7-38 (234)
260 2pid_A Tyrosyl-tRNA synthetase 21.5 80 0.0027 26.1 3.8 27 20-47 63-89 (356)
261 2zat_A Dehydrogenase/reductase 21.5 1.2E+02 0.0041 22.9 4.7 34 9-45 14-47 (260)
262 2jba_A Phosphate regulon trans 21.5 82 0.0028 20.2 3.3 32 123-154 45-85 (127)
263 3o1l_A Formyltetrahydrofolate 21.4 1E+02 0.0035 24.9 4.3 44 105-152 117-160 (302)
264 1uxo_A YDEN protein; hydrolase 21.4 99 0.0034 21.5 3.9 38 8-45 4-42 (192)
265 3u7q_A Nitrogenase molybdenum- 21.4 1.1E+02 0.0038 26.4 4.8 25 124-151 417-441 (492)
266 3ing_A Homoserine dehydrogenas 21.3 1E+02 0.0036 25.0 4.4 39 7-45 81-119 (325)
267 3e61_A Putative transcriptiona 21.1 1.1E+02 0.0037 23.1 4.3 32 123-154 63-95 (277)
268 3qha_A Putative oxidoreductase 21.1 71 0.0024 25.1 3.3 34 8-46 15-48 (296)
269 3i42_A Response regulator rece 20.9 86 0.0029 20.2 3.3 33 123-155 46-87 (127)
270 2r25_B Osmosensing histidine p 20.9 1.1E+02 0.0039 20.0 4.0 32 123-154 51-90 (133)
271 2j37_W Signal recognition part 20.9 1.2E+02 0.004 26.4 4.8 40 8-47 101-140 (504)
272 1mvo_A PHOP response regulator 20.8 1.3E+02 0.0043 19.6 4.2 31 124-154 47-84 (136)
273 3dhn_A NAD-dependent epimerase 20.8 58 0.002 23.9 2.6 34 9-46 5-38 (227)
274 3kcn_A Adenylate cyclase homol 20.6 1.5E+02 0.0051 19.8 4.7 31 124-154 48-85 (151)
275 4gxt_A A conserved functionall 20.5 72 0.0025 26.6 3.3 25 22-46 223-247 (385)
276 3g0o_A 3-hydroxyisobutyrate de 20.4 71 0.0024 25.2 3.2 36 6-46 5-40 (303)
277 1q57_A DNA primase/helicase; d 20.4 1.3E+02 0.0046 25.5 5.1 43 105-152 340-401 (503)
278 4dad_A Putative pilus assembly 20.3 89 0.0031 20.8 3.4 32 124-155 67-105 (146)
279 1cyd_A Carbonyl reductase; sho 20.2 70 0.0024 23.8 3.0 32 11-45 9-40 (244)
280 1uay_A Type II 3-hydroxyacyl-C 20.2 62 0.0021 24.0 2.7 19 26-44 16-34 (242)
281 3j20_B 30S ribosomal protein S 20.1 94 0.0032 23.6 3.6 31 124-154 111-143 (202)
282 2pnf_A 3-oxoacyl-[acyl-carrier 20.1 70 0.0024 23.8 3.0 33 10-45 8-40 (248)
283 1dhr_A Dihydropteridine reduct 20.1 68 0.0023 24.1 2.9 31 11-44 9-39 (241)
284 1zym_A Enzyme I; phosphotransf 20.1 66 0.0023 25.3 2.8 25 127-151 178-204 (258)
285 1k68_A Phytochrome response re 20.1 1.8E+02 0.0063 18.6 5.0 33 124-156 55-96 (140)
286 3c3w_A Two component transcrip 20.0 67 0.0023 23.8 2.8 31 124-154 47-84 (225)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.97 E-value=5.1e-30 Score=225.16 Aligned_cols=171 Identities=16% Similarity=0.307 Sum_probs=122.4
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcC--cEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCCCC
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKG--FHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLPASSY 83 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G--~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~ 83 (199)
.+++||+++|||++||+|||++|||+|++|| ++|||++|+.+.+++.+... ...++|+|+.+++ ++|++.+
T Consensus 11 ~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~----~~~~~i~~~~ipd---glp~~~~ 83 (454)
T 3hbf_A 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN----EFLPNIKYYNVHD---GLPKGYV 83 (454)
T ss_dssp -CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS----CCCTTEEEEECCC---CCCTTCC
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc----cCCCCceEEecCC---CCCCCcc
Confidence 3478999999999999999999999999999 99999999877766643210 1135799999998 7776532
Q ss_pred CCCch-hhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEecchhHHHHHH
Q 046053 84 ESSTT-QDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFTISACSFKGL 162 (199)
Q Consensus 84 ~~~~~-~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~a~~~~~~ 162 (199)
..... ..+..++. ...+.+++.++++.++ .+ .+++|||+|++++|+.++|+++|||++.|||++++.++++
T Consensus 84 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~-~~--~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~ 155 (454)
T 3hbf_A 84 SSGNPREPIFLFIK-----AMQENFKHVIDEAVAE-TG--KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTH 155 (454)
T ss_dssp CCSCTTHHHHHHHH-----HHHHHHHHHHHHHHHH-HC--CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHH
T ss_pred ccCChHHHHHHHHH-----HHHHHHHHHHHHHHhh-cC--CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHH
Confidence 11111 11222333 3333444555443211 01 5799999999999999999999999999999999999999
Q ss_pred HhHHHHHHcCCCCCCCcccccccccccccccCCCCCC
Q 046053 163 KQFQTLKEKGLFPLKDESCLKKEYLDSVMDWIPGMAA 199 (199)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ 199 (199)
+|++.+.++.... .. .++..+.++||+|+
T Consensus 156 ~~~~~~~~~~~~~--~~------~~~~~~~~iPg~p~ 184 (454)
T 3hbf_A 156 VYTDLIREKTGSK--EV------HDVKSIDVLPGFPE 184 (454)
T ss_dssp HTHHHHHHTCCHH--HH------TTSSCBCCSTTSCC
T ss_pred HhhHHHHhhcCCC--cc------ccccccccCCCCCC
Confidence 9999988762111 00 11345667899863
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.95 E-value=3.4e-27 Score=208.37 Aligned_cols=192 Identities=45% Similarity=0.841 Sum_probs=130.0
Q ss_pred CCCCCCCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCCC
Q 046053 1 MAISLHYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLPA 80 (199)
Q Consensus 1 ~~~~~~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~ 80 (199)
|+....+++||+++|+|++||+|||++||++|++|||+|||++++.+..++.+........+.++++|+.+++ ++|+
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~---~lp~ 77 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPD---GLTP 77 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECC---CCC-
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCC---CCCC
Confidence 5665566789999999999999999999999999999999999998876654321000001124899999997 5654
Q ss_pred CCCCCCchhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEecchhHHHH
Q 046053 81 SSYESSTTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFTISACSFK 160 (199)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~a~~~~ 160 (199)
...+.....+...++..+ .+.+.+.++++++++..+..+ .++||||+|.++.|+..+|+++|||++.||+++++.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ll~~l~~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 154 (482)
T 2pq6_A 78 MEGDGDVSQDVPTLCQSV-RKNFLKPYCELLTRLNHSTNV--PPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLL 154 (482)
T ss_dssp --------CCHHHHHHHH-TTSSHHHHHHHHHHHHTCSSS--CCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHH
T ss_pred cccccCcchhHHHHHHHH-HHHhhHHHHHHHHHHhhhccC--CCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHH
Confidence 200001122444455544 467778899999988531001 47999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHcCCCCCCCcccccccccccccccCCCCC
Q 046053 161 GLKQFQTLKEKGLFPLKDESCLKKEYLDSVMDWIPGMA 198 (199)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~ 198 (199)
.+.+++.+...|+.|.......++...++.+.++||++
T Consensus 155 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 192 (482)
T 2pq6_A 155 NVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLK 192 (482)
T ss_dssp HHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCC
T ss_pred HHHHHHHHHhcCCCCCccccccccccccCccccCCCCC
Confidence 99999998888888865432110101134555677764
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.91 E-value=1.9e-23 Score=184.46 Aligned_cols=154 Identities=16% Similarity=0.150 Sum_probs=112.6
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhc-CcEEEEEeCCch--hhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCCC
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHK-GFHITCVNTEFN--HRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLPASS 82 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~-G~~VT~~t~~~~--~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~ 82 (199)
.+++||+++|+|++||++||++||++|++| ||+|||++++.+ .+.+.+... ...++++|+.+++. .++..
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~----~~~~~i~~~~l~~~--~~~~~- 76 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD----SLPSSISSVFLPPV--DLTDL- 76 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-----CCTTEEEEECCCC--CCTTS-
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc----ccCCCceEEEcCCC--CCCCC-
Confidence 355899999999999999999999999998 999999999874 333322100 00248999999863 12211
Q ss_pred CCCCchhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCc-eEEEecCCchhHHHHHHHhCCCcEEEecchhHHHHH
Q 046053 83 YESSTTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAV-SCIISDDFMAFTITAAQRLGLPSALFFTISACSFKG 161 (199)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~-d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~a~~~~~ 161 (199)
. . ..+....+... ...+.+.++++++++.+. .++ ||||+|.++.|+.++|+++|||++.||+++++.+++
T Consensus 77 ~--~-~~~~~~~~~~~-~~~~~~~l~~ll~~~~~~-----~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~ 147 (480)
T 2vch_A 77 S--S-STRIESRISLT-VTRSNPELRKVFDSFVEG-----GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSF 147 (480)
T ss_dssp C--T-TCCHHHHHHHH-HHTTHHHHHHHHHHHHHT-----TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHH
T ss_pred C--C-chhHHHHHHHH-HHhhhHHHHHHHHHhccC-----CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHH
Confidence 1 1 11222222223 355667888888876321 468 999999999999999999999999999999999999
Q ss_pred HHhHHHHHHcCCCC
Q 046053 162 LKQFQTLKEKGLFP 175 (199)
Q Consensus 162 ~~~~~~l~~~~~~~ 175 (199)
++|+|.+.+.+..+
T Consensus 148 ~~~~~~~~~~~~~~ 161 (480)
T 2vch_A 148 FLHLPKLDETVSCE 161 (480)
T ss_dssp HHHHHHHHHHCCSC
T ss_pred HHHHHHHHhcCCCc
Confidence 99999888765433
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.90 E-value=3.2e-23 Score=181.98 Aligned_cols=157 Identities=18% Similarity=0.263 Sum_probs=104.7
Q ss_pred CCCCCCCcceEEEEcCCCcccHHHHHHHHHHhhhcC--cEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCC
Q 046053 1 MAISLHYKVHAVCIPSPFQSHIKAMLQSAKLLHHKG--FHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGL 78 (199)
Q Consensus 1 ~~~~~~~~~hvv~vp~p~~GH~~P~l~La~~La~~G--~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~ 78 (199)
|+.. ..++||+++|+|++||+|||++||++|++|| +.||+++++.+..++.+... ....++++|+.+++ ++
T Consensus 1 m~~~-~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~---~~~~~~i~~~~i~~---gl 73 (456)
T 2c1x_A 1 MSQT-TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSM---HTMQCNIKSYDISD---GV 73 (456)
T ss_dssp -------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC----------CTTEEEEECCC---CC
T ss_pred CCCC-CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccc---ccCCCceEEEeCCC---CC
Confidence 5553 4568999999999999999999999999995 66788999866554433210 00124799999987 66
Q ss_pred CCCCCCCCchhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEecchhHH
Q 046053 79 PASSYESSTTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFTISACS 158 (199)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~a~~ 158 (199)
|++.+....... .+..+ .+.+...++++++++.++ .+ .++||||+|.++.|+.++|+++|||++.||+++++.
T Consensus 74 p~~~~~~~~~~~---~~~~~-~~~~~~~~~~~l~~l~~~-~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~ 146 (456)
T 2c1x_A 74 PEGYVFAGRPQE---DIELF-TRAAPESFRQGMVMAVAE-TG--RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNS 146 (456)
T ss_dssp CTTCCCCCCTTH---HHHHH-HHHHHHHHHHHHHHHHHH-HT--CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHH
T ss_pred CCcccccCChHH---HHHHH-HHHhHHHHHHHHHHHHhc-cC--CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHH
Confidence 654210111111 11112 222233455555443210 01 489999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHc
Q 046053 159 FKGLKQFQTLKEK 171 (199)
Q Consensus 159 ~~~~~~~~~l~~~ 171 (199)
++.+.+++.+.+.
T Consensus 147 ~~~~~~~~~~~~~ 159 (456)
T 2c1x_A 147 LSTHVYIDEIREK 159 (456)
T ss_dssp HHHHHTHHHHHHH
T ss_pred HHHHhhhHHHHhc
Confidence 9999888877654
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.90 E-value=4.1e-23 Score=181.54 Aligned_cols=151 Identities=19% Similarity=0.287 Sum_probs=111.1
Q ss_pred CCCCC-CCcceEEEEcCCCcccHHHHHHHHHHhhhc--CcEEEEEeCCchhh-----hhhhhcCCCCCCCCCCeeEEEeC
Q 046053 1 MAISL-HYKVHAVCIPSPFQSHIKAMLQSAKLLHHK--GFHITCVNTEFNHR-----CFLKSRGHHSLDGLPNFRFEAIP 72 (199)
Q Consensus 1 ~~~~~-~~~~hvv~vp~p~~GH~~P~l~La~~La~~--G~~VT~~t~~~~~~-----~~~~~~~~~~~~~~~~i~f~~l~ 72 (199)
|+-++ .+++||+++|+|++||+|||++||++|++| ||+|||++++.+.. .+.+.. ...++++|+.++
T Consensus 1 ~~~~~~~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~-----~~~~~i~~~~lp 75 (463)
T 2acv_A 1 MSMSDINKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL-----ASQPQIQLIDLP 75 (463)
T ss_dssp --CHHHHHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH-----CSCTTEEEEECC
T ss_pred CCcccCCCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc-----cCCCCceEEECC
Confidence 44443 357899999999999999999999999999 99999999987632 121110 112479999998
Q ss_pred CCCCCCCCCCCCCCchhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEe
Q 046053 73 DGRDGLPASSYESSTTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFF 152 (199)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 152 (199)
+. .++.. + .....+.. +.. . ...+.+.++++++++.. .++||||+|.++.|+.++|+++|||+++||
T Consensus 76 ~~--~~~~~-~-~~~~~~~~-~~~-~-~~~~~~~~~~ll~~~~~------~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~ 142 (463)
T 2acv_A 76 EV--EPPPQ-E-LLKSPEFY-ILT-F-LESLIPHVKATIKTILS------NKVVGLVLDFFCVSMIDVGNEFGIPSYLFL 142 (463)
T ss_dssp CC--CCCCG-G-GGGSHHHH-HHH-H-HHHTHHHHHHHHHHHCC------TTEEEEEEEGGGGGGHHHHHHTTCCEEEEE
T ss_pred CC--CCCcc-c-ccCCccHH-HHH-H-HHhhhHHHHHHHHhccC------CCCeEEEECCcchhHHHHHHHcCCCEEEEe
Confidence 73 23321 1 00111222 322 2 35566788999888621 589999999999999999999999999999
Q ss_pred cchhHHHHHHHhHHHHH
Q 046053 153 TISACSFKGLKQFQTLK 169 (199)
Q Consensus 153 ~~~a~~~~~~~~~~~l~ 169 (199)
+++++.+++++++|.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 143 TSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp SSCHHHHHHHHHGGGSC
T ss_pred CchHHHHHHHHHHHhhc
Confidence 99999999999988764
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.77 E-value=6.5e-18 Score=145.53 Aligned_cols=129 Identities=14% Similarity=0.038 Sum_probs=91.6
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCCCCCCC-
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLPASSYESS- 86 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~~~~- 86 (199)
.+||+++++|++||++|++.||++|+++||+|||++++.+.+.+.+. +++|+.++. +++.+.....
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~----------g~~~~~~~~---~~~~~~~~~~~ 78 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA----------GATPVVYDS---ILPKESNPEES 78 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCEEEECCC---CSCCTTCTTCC
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC----------CCEEEecCc---cccccccchhh
Confidence 57999999999999999999999999999999999999877655442 688888876 3332210000
Q ss_pred chhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEecchh
Q 046053 87 TTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFTISA 156 (199)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~a 156 (199)
...+...++..+ .+.....+.++.+.+++ .+|||||+|.++.|+..+|+++|||++.+++.++
T Consensus 79 ~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~------~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~ 141 (424)
T 2iya_A 79 WPEDQESAMGLF-LDEAVRVLPQLEDAYAD------DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFV 141 (424)
T ss_dssp CCSSHHHHHHHH-HHHHHHHHHHHHHHTTT------SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCC
T ss_pred cchhHHHHHHHH-HHHHHHHHHHHHHHHhc------cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccc
Confidence 011222222222 22222334444444433 5899999999989999999999999999997764
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.70 E-value=1.1e-16 Score=136.14 Aligned_cols=134 Identities=14% Similarity=0.033 Sum_probs=84.9
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCC----CCCCCC
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRD----GLPASS 82 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~----~~~~~~ 82 (199)
+.+||+|+|+|++||+||++.||++|++|||+|||++++......+ .++.++.+..... ..+...
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~~~ 89 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-----------AGLCAVDVSPGVNYAKLFVPDDT 89 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-----------TTCEEEESSTTCCSHHHHSCCC-
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-----------cCCeeEecCCchhHhhhcccccc
Confidence 4789999999999999999999999999999999999987664321 2566666643110 000000
Q ss_pred ---CCCCchhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEecchhH
Q 046053 83 ---YESSTTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFTISAC 157 (199)
Q Consensus 83 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~a~ 157 (199)
............+...+.......+.++++.+++ .+||+||+|.+..|+..+|+++|||++.+++....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~ 161 (400)
T 4amg_A 90 DVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS------WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPAD 161 (400)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHH------HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTT
T ss_pred ccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCEEEECcchHHHHHHHHHcCCCceeecccccc
Confidence 0000000000111111012222333444443333 37999999999999999999999999998776543
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.61 E-value=5.8e-15 Score=127.01 Aligned_cols=124 Identities=9% Similarity=0.104 Sum_probs=83.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCCCCCCCch
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLPASSYESSTT 88 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~~~~~~ 88 (199)
+||++++++++||++|++.||++|+++||+|||++++...+.+.+ .+++|+.++.. ..........
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~----------~g~~~~~i~~~---~~~~~~~~~~- 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE----------VGVPHVPVGPS---ARAPIQRAKP- 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----------TTCCEEECCC----------CCSC-
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH----------cCCeeeeCCCC---HHHHhhcccc-
Confidence 589999999999999999999999999999999999986554433 27888888752 1111000000
Q ss_pred hhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecC-Cchh--HHHHHHHhCCCcEEEecch
Q 046053 89 QDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDD-FMAF--TITAAQRLGLPSALFFTIS 155 (199)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~-~~~~--~~~vA~~lgIP~v~~~~~~ 155 (199)
.....+..++.......++++.+. . .+|||||+|. +..| +..+|+++|||++.+++.+
T Consensus 67 -~~~~~~~~~~~~~~~~~~~~l~~~--~------~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~ 127 (415)
T 1iir_A 67 -LTAEDVRRFTTEAIATQFDEIPAA--A------EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP 127 (415)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHH--T------TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred -cchHHHHHHHHHHHHHHHHHHHHH--h------cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCC
Confidence 111111111011112223333321 2 4799999998 7788 8999999999999998876
No 9
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.58 E-value=2.1e-14 Score=121.82 Aligned_cols=126 Identities=13% Similarity=-0.003 Sum_probs=86.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCCCCC-CCc
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLPASSYE-SST 87 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~~-~~~ 87 (199)
+||+++++++.||++|++.|+++|+++||+|+|++++.+.+.+.. .+++|+.++.. ++..... ...
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~----------~G~~~~~~~~~---~~~~~~~~~~~ 71 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA----------AGAEVVLYKSE---FDTFHVPEVVK 71 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH----------TTCEEEECCCG---GGTSSSSSSSC
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH----------cCCEEEecccc---ccccccccccc
Confidence 499999999999999999999999999999999999876665543 26888888752 2111000 001
Q ss_pred hhhHHHHHHH-HHHhhhhHHHHHHHHHhhccCCCCCCCceEEEec-CCchhHHHHHHHhCCCcEEEecc
Q 046053 88 TQDMYSLCEN-IINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISD-DFMAFTITAAQRLGLPSALFFTI 154 (199)
Q Consensus 88 ~~~~~~~~~~-~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D-~~~~~~~~vA~~lgIP~v~~~~~ 154 (199)
..+....+.. + .+.....+.++.+.+.+ .+||+||+| .+..|+..+|+++|||++.+++.
T Consensus 72 ~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~------~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~ 133 (402)
T 3ia7_A 72 QEDAETQLHLVY-VRENVAILRAAEEALGD------NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGG 133 (402)
T ss_dssp CTTHHHHHHHHH-HHHHHHHHHHHHHHHTT------CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESS
T ss_pred ccchHHHHHHHH-HHHHHHHHHHHHHHHhc------cCCCEEEECchHHHHHHHHHHhhCCCEEEEecc
Confidence 1112211222 2 22222334555555543 589999999 88888999999999999998754
No 10
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.56 E-value=4.8e-14 Score=121.25 Aligned_cols=129 Identities=14% Similarity=0.112 Sum_probs=87.7
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCCCCCCC-
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLPASSYESS- 86 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~~~~- 86 (199)
.+||+++++++.||++|++.|+++|+++||+|+++++....+.+.+ .+++++.++. .++......+
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~----------~g~~~~~~~~---~~~~~~~~~~~ 73 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA----------TGPRPVLYHS---TLPGPDADPEA 73 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT----------TSCEEEECCC---CSCCTTSCGGG
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh----------CCCEEEEcCC---cCccccccccc
Confidence 4699999999999999999999999999999999999876554432 2688888875 2222110000
Q ss_pred chhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEecchh
Q 046053 87 TTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFTISA 156 (199)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~a 156 (199)
...+....+..+ .......+..+.+.+.+ .+|||||+|.+..|+..+|+++|||++.+++...
T Consensus 74 ~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~------~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~ 136 (430)
T 2iyf_A 74 WGSTLLDNVEPF-LNDAIQALPQLADAYAD------DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLV 136 (430)
T ss_dssp GCSSHHHHHHHH-HHHHHHHHHHHHHHHTT------SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCC
T ss_pred cchhhHHHHHHH-HHHHHHHHHHHHHHhhc------cCCCEEEECCccHHHHHHHHHcCCCEEEEecccc
Confidence 011222222222 12222234444444433 4899999998878899999999999999987653
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.53 E-value=7.2e-14 Score=120.09 Aligned_cols=124 Identities=8% Similarity=0.035 Sum_probs=82.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCC-CCCCCCCCCc
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDG-LPASSYESST 87 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~-~~~~~~~~~~ 87 (199)
+||+++++++.||++|++.||++|+++||+|||++++...+.+.+. +++|+.++....+ +..... ..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~----------g~~~~~~~~~~~~~~~~~~~--~~ 68 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV----------GVPHVPVGLPQHMMLQEGMP--PP 68 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCCEEECSCCGGGCCCTTSC--CC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc----------CCeeeecCCCHHHHHhhccc--cc
Confidence 5899999999999999999999999999999999998766555432 6888888752101 110000 00
Q ss_pred hhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecC-Cchh--HHHHHHHhCCCcEEEecch
Q 046053 88 TQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDD-FMAF--TITAAQRLGLPSALFFTIS 155 (199)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~-~~~~--~~~vA~~lgIP~v~~~~~~ 155 (199)
. . . .+..+ .. ....++++.+.+. . .+|||||+|. +..| +..+|+++|||++.+++.+
T Consensus 69 ~-~-~-~~~~~-~~---~~~~~~~~~l~~~--~--~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~ 128 (416)
T 1rrv_A 69 P-P-E-EEQRL-AA---MTVEMQFDAVPGA--A--EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP 128 (416)
T ss_dssp C-H-H-HHHHH-HH---HHHHHHHHHHHHH--T--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred h-h-H-HHHHH-HH---HHHHHHHHHHHHH--h--cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 1 1 0 11111 11 1123333333210 0 4799999997 4556 7889999999999988765
No 12
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.52 E-value=6e-14 Score=119.97 Aligned_cols=129 Identities=9% Similarity=-0.032 Sum_probs=87.9
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCCCCCCC
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLPASSYESS 86 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~~~~ 86 (199)
..+||+++++++.||++|++.|+++|.++||+|+|++++...+.+.. .+++++.++. .++.......
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~----------~G~~~~~~~~---~~~~~~~~~~ 85 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA----------AGATVVPYQS---EIIDADAAEV 85 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH----------TTCEEEECCC---STTTCCHHHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh----------cCCEEEeccc---cccccccchh
Confidence 35899999999999999999999999999999999998877766544 2688888875 2322100000
Q ss_pred -chhhHHHHHHH-HHHhhhhHHHHHHHHHhhccCCCCCCCceEEEec-CCchhHHHHHHHhCCCcEEEecch
Q 046053 87 -TTQDMYSLCEN-IINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISD-DFMAFTITAAQRLGLPSALFFTIS 155 (199)
Q Consensus 87 -~~~~~~~~~~~-~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D-~~~~~~~~vA~~lgIP~v~~~~~~ 155 (199)
...+....+.. + .+.....+.++.+.+.+ .+||+||+| ....++..+|+++|||++.+.+..
T Consensus 86 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~------~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~ 150 (415)
T 3rsc_A 86 FGSDDLGVRPHLMY-LRENVSVLRATAEALDG------DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAF 150 (415)
T ss_dssp HHSSSSCHHHHHHH-HHHHHHHHHHHHHHHSS------SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSC
T ss_pred hccccHHHHHHHHH-HHHHHHHHHHHHHHHhc------cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecc
Confidence 00000011111 1 12222334455454543 589999999 888889999999999999988543
No 13
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.41 E-value=3.3e-12 Score=108.14 Aligned_cols=128 Identities=11% Similarity=0.031 Sum_probs=82.9
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCC--C-------CCC
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGR--D-------GLP 79 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~--~-------~~~ 79 (199)
+||++++.++.||++|++.|+++|+++||+|++++++...+.+.. .+++++.++... . +.+
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG----------VGLPAVATTDLPIRHFITTDREGRP 70 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----------TTCCEEESCSSCHHHHHHBCTTSCB
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh----------CCCEEEEeCCcchHHHHhhhcccCc
Confidence 489999999999999999999999999999999998865544432 267787776420 0 011
Q ss_pred CCCCCCCchhhHHHHH-HHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEecch
Q 046053 80 ASSYESSTTQDMYSLC-ENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFTIS 155 (199)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~ 155 (199)
.. ..........+ ..++.......+.++.+.+++ .+||+||+|.+..|+..+|+++|||++.++...
T Consensus 71 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~ 138 (384)
T 2p6p_A 71 EA---IPSDPVAQARFTGRWFARMAASSLPRMLDFSRA------WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDA 138 (384)
T ss_dssp CC---CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred cc---cCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc------cCCcEEEECcchhhHHHHHHhcCCCEEEeccCC
Confidence 10 00000111111 111011112234444444433 379999999888888899999999999987543
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.40 E-value=2.6e-12 Score=111.23 Aligned_cols=131 Identities=11% Similarity=0.025 Sum_probs=86.3
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCC--CCCCC----
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRD--GLPAS---- 81 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~--~~~~~---- 81 (199)
.+||+++++++.||++|++.|+++|.++||+|+|++++...+.+.. .+++|+.++.... ++...
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~----------~G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA----------AGLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT----------TTCCEEECSCCCCHHHHHHHTTHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh----------CCCceeecCCccchHHHhhhhhcc
Confidence 5799999999999999999999999999999999999876554432 3788988875210 00000
Q ss_pred -------CCCCC--ch-hhHHHH---HHHHHH---hh-hh-H-HHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHH
Q 046053 82 -------SYESS--TT-QDMYSL---CENIIN---DV-LL-Q-PFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQ 142 (199)
Q Consensus 82 -------~~~~~--~~-~~~~~~---~~~~~~---~~-~~-~-~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~ 142 (199)
.+..+ .. ..+..+ +..+ . .. +. . .+.++++.+++ .+||+||+|.+..++..+|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~------~~pDlVv~d~~~~~~~~aA~ 162 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVL-TPTFYALMSPDTLIEGMVSFCRK------WRPDLVIWEPLTFAAPIAAA 162 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHH-HHHTTTTSSCHHHHHHHHHHHHH------HCCSEEEECTTCTHHHHHHH
T ss_pred cccccccccccccCcchhhhhhhhhHHHHH-HHHHHhhcchHHHHHHHHHHHHh------cCCCEEEecCcchhHHHHHH
Confidence 00000 00 011111 1111 1 10 11 2 45555554443 37999999998888999999
Q ss_pred HhCCCcEEEecch
Q 046053 143 RLGLPSALFFTIS 155 (199)
Q Consensus 143 ~lgIP~v~~~~~~ 155 (199)
++|||++.+....
T Consensus 163 ~lgiP~v~~~~~~ 175 (441)
T 2yjn_A 163 VTGTPHARLLWGP 175 (441)
T ss_dssp HHTCCEEEECSSC
T ss_pred HcCCCEEEEecCC
Confidence 9999999987654
No 15
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.40 E-value=4.2e-12 Score=108.23 Aligned_cols=123 Identities=11% Similarity=0.098 Sum_probs=85.5
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCC-------
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLP------- 79 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~------- 79 (199)
..+||++++.++.||++|++.|+++|.++||+|+++++ ...+.+.. .+++++.++... .+.
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~----------~G~~~~~~~~~~-~~~~~~~~~~ 86 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA----------AGLEVVDVAPDY-SAVKVFEQVA 86 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT----------TTCEEEESSTTC-CHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh----------CCCeeEecCCcc-CHHHHhhhcc
Confidence 45899999999999999999999999999999999999 55554432 378888887420 000
Q ss_pred ------------CCCCCCCchhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCC
Q 046053 80 ------------ASSYESSTTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLP 147 (199)
Q Consensus 80 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP 147 (199)
.. .........++... ...+...+.+++++ .+||+||+|....++..+|+++|||
T Consensus 87 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~l~~~l~~---------~~pDlVv~d~~~~~~~~aA~~~giP 153 (398)
T 3oti_A 87 KDNPRFAETVATRP---AIDLEEWGVQIAAV-NRPLVDGTMALVDD---------YRPDLVVYEQGATVGLLAADRAGVP 153 (398)
T ss_dssp HHCHHHHHTGGGSC---CCSGGGGHHHHHHH-HGGGHHHHHHHHHH---------HCCSEEEEETTCHHHHHHHHHHTCC
T ss_pred cCCccccccccCCh---hhhHHHHHHHHHHH-HHHHHHHHHHHHHH---------cCCCEEEECchhhHHHHHHHHcCCC
Confidence 00 01111222222222 23333445555554 3799999998888888999999999
Q ss_pred cEEEecc
Q 046053 148 SALFFTI 154 (199)
Q Consensus 148 ~v~~~~~ 154 (199)
++.....
T Consensus 154 ~v~~~~~ 160 (398)
T 3oti_A 154 AVQRNQS 160 (398)
T ss_dssp EEEECCT
T ss_pred EEEEecc
Confidence 9987655
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.33 E-value=9e-12 Score=106.05 Aligned_cols=131 Identities=10% Similarity=0.072 Sum_probs=83.1
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCC----------
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGR---------- 75 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~---------- 75 (199)
...+||++++.++.||++|++.|+++|.++||+|++++++...+.+.. .+++++.++...
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~----------~G~~~~~~~~~~~~~~~~~~~~ 82 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG----------AGLPFAPTCPSLDMPEVLSWDR 82 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH----------TTCCEEEEESSCCHHHHHSBCT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh----------CCCeeEecCCccchHhhhhhhc
Confidence 457899999999999999999999999999999999998766555543 257777765310
Q ss_pred CCCCCCCCCCCchhh-HHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEecc
Q 046053 76 DGLPASSYESSTTQD-MYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFTI 154 (199)
Q Consensus 76 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~ 154 (199)
.+.+.. . ...... ...+...+ .......+.++.+.+.+ .+||+||+|....++..+|+.+|||++.+...
T Consensus 83 ~~~~~~-~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~------~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~ 153 (398)
T 4fzr_A 83 EGNRTT-M-PREEKPLLEHIGRGY-GRLVLRMRDEALALAER------WKPDLVLTETYSLTGPLVAATLGIPWIEQSIR 153 (398)
T ss_dssp TSCBCC-C-CSSHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH------HCCSEEEEETTCTHHHHHHHHHTCCEEEECCS
T ss_pred cCcccc-c-ccchhhHHHHHHHHH-HHHHHHHHHHHHHHHHh------CCCCEEEECccccHHHHHHHhhCCCEEEeccC
Confidence 000000 0 000111 11111111 11122223334333332 37999999988888899999999999987765
Q ss_pred h
Q 046053 155 S 155 (199)
Q Consensus 155 ~ 155 (199)
.
T Consensus 154 ~ 154 (398)
T 4fzr_A 154 L 154 (398)
T ss_dssp S
T ss_pred C
Confidence 3
No 17
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.29 E-value=5.7e-12 Score=108.17 Aligned_cols=124 Identities=9% Similarity=0.070 Sum_probs=80.5
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCCCCCCCch
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLPASSYESSTT 88 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~~~~~~ 88 (199)
+||++++.+..||++|++.|+++|.++||+|+|++++...+.++. .+++|+.++...... .+.. ....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~----------~g~~~~~l~~~~~~~-~~~~-~~~~ 68 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE----------VGVPMVPVGRAVRAG-AREP-GELP 68 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH----------TTCCEEECSSCSSGG-GSCT-TCCC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH----------cCCceeecCCCHHHH-hccc-cCCH
Confidence 579999999999999999999999999999999999876665543 268888887421101 0000 0001
Q ss_pred hhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchhH---HHHHHHhCCCcEEEecchh
Q 046053 89 QDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFT---ITAAQRLGLPSALFFTISA 156 (199)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~---~~vA~~lgIP~v~~~~~~a 156 (199)
......+ .......++++.+.+ .++|+||+|....++ ..+|+++|||++..+.+..
T Consensus 69 ~~~~~~~----~~~~~~~~~~l~~~~--------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~ 127 (404)
T 3h4t_A 69 PGAAEVV----TEVVAEWFDKVPAAI--------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD 127 (404)
T ss_dssp TTCGGGH----HHHHHHHHHHHHHHH--------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred HHHHHHH----HHHHHHHHHHHHHHh--------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence 1111111 111222233333322 268999999665554 7899999999998777654
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.28 E-value=3.1e-11 Score=102.27 Aligned_cols=130 Identities=16% Similarity=0.147 Sum_probs=80.9
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEe-CCCCC-------CCC
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAI-PDGRD-------GLP 79 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l-~~~~~-------~~~ 79 (199)
++||+++..++.||++|++.|+++|.++||+|++++++...+.+.. .+++++.+ +.... ..+
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~ 70 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG----------AGLTTAGIRGNDRTGDTGGTTQLR 70 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH----------BTCEEEEC--------------CC
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh----------CCCceeeecCCccchhhhhhhccc
Confidence 3689999999999999999999999999999999998765554443 25777766 32100 000
Q ss_pred CCCCCC---CchhhHHHHHHHHHHhhh----hHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEe
Q 046053 80 ASSYES---STTQDMYSLCENIINDVL----LQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFF 152 (199)
Q Consensus 80 ~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 152 (199)
.. ... .........+... ...+ ...+.++.+.+.+ .+||+||+|....++..+|+++|||++.+.
T Consensus 71 ~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~------~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~ 142 (391)
T 3tsa_A 71 FP-NPAFGQRDTEAGRQLWEQT-ASNVAQSSLDQLPEYLRLAEA------WRPSVLLVDVCALIGRVLGGLLDLPVVLHR 142 (391)
T ss_dssp SC-CGGGGCTTSHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHTTCCEEEEC
T ss_pred cc-ccccccccchhHHHHHHHH-HHHHhhcchhhHHHHHHHHHh------cCCCEEEeCcchhHHHHHHHHhCCCEEEEe
Confidence 00 000 0001111122211 1222 1113344333333 379999999877778889999999999986
Q ss_pred cch
Q 046053 153 TIS 155 (199)
Q Consensus 153 ~~~ 155 (199)
...
T Consensus 143 ~~~ 145 (391)
T 3tsa_A 143 WGV 145 (391)
T ss_dssp CSC
T ss_pred cCC
Confidence 544
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.15 E-value=2.3e-10 Score=97.29 Aligned_cols=130 Identities=14% Similarity=-0.021 Sum_probs=82.2
Q ss_pred CCCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCC----------
Q 046053 5 LHYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDG---------- 74 (199)
Q Consensus 5 ~~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~---------- 74 (199)
+..++||++++.++.||++|++.|+++|.++||+|++++++...+.+.. .+++++.++..
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~ 86 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK----------LGFEPVATGMPVFDGFLAALR 86 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH----------TTCEEEECCCCHHHHHHHHHH
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh----------cCCceeecCcccccchhhhhh
Confidence 3457999999999999999999999999999999999999865443432 26888877630
Q ss_pred ----CCCCCCCCCCCCchhhHHHHHHHHHHhh-hhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcE
Q 046053 75 ----RDGLPASSYESSTTQDMYSLCENIINDV-LLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSA 149 (199)
Q Consensus 75 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v 149 (199)
....+.. ........+...+ ... ....+..+.+.+.+ .+||+||+|....++..+|+++|||++
T Consensus 87 ~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~------~~pDvVv~~~~~~~~~~aa~~~giP~v 155 (412)
T 3otg_A 87 IRFDTDSPEGL----TPEQLSELPQIVF-GRVIPQRVFDELQPVIER------LRPDLVVQEISNYGAGLAALKAGIPTI 155 (412)
T ss_dssp HHHSCSCCTTC----CHHHHTTSHHHHH-HTHHHHHHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHTCCEE
T ss_pred hhhcccCCccC----ChhHhhHHHHHHH-hccchHHHHHHHHHHHHh------cCCCEEEECchhhHHHHHHHHcCCCEE
Confidence 0001100 0000000011111 111 11122333333332 379999999877778889999999999
Q ss_pred EEecch
Q 046053 150 LFFTIS 155 (199)
Q Consensus 150 ~~~~~~ 155 (199)
......
T Consensus 156 ~~~~~~ 161 (412)
T 3otg_A 156 CHGVGR 161 (412)
T ss_dssp EECCSC
T ss_pred Eecccc
Confidence 876553
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.82 E-value=5.2e-08 Score=82.57 Aligned_cols=117 Identities=15% Similarity=0.175 Sum_probs=68.7
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhh-hhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCCCCCCC
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHR-CFLKSRGHHSLDGLPNFRFEAIPDGRDGLPASSYESS 86 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~-~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~~~~ 86 (199)
+.+|++.....-||++|.+.||++|.++||+|+|+++....+ ++-.. .++++..++.. +++.. ....
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~---------~g~~~~~i~~~--~~~~~-~~~~ 69 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK---------AGLPLHLIQVS--GLRGK-GLKS 69 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG---------GTCCEEECC--------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh---------cCCcEEEEECC--CcCCC-CHHH
Confidence 457887766556999999999999999999999999875432 22111 26777777642 33211 0001
Q ss_pred chhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHhCCCcEEE
Q 046053 87 TTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRLGLPSALF 151 (199)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~lgIP~v~~ 151 (199)
.......++..+ .....++++ .+||+||.+..... +..+|+.+|||+++.
T Consensus 70 ~~~~~~~~~~~~------~~~~~~l~~---------~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 70 LVKAPLELLKSL------FQALRVIRQ---------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp ---CHHHHHHHH------HHHHHHHHH---------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHH------HHHHHHHHh---------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 111122222222 112344444 37999999964433 455678889999975
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.17 E-value=3.1e-05 Score=64.22 Aligned_cols=119 Identities=13% Similarity=0.099 Sum_probs=70.8
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhh-hhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCCCCCCC
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHR-CFLKSRGHHSLDGLPNFRFEAIPDGRDGLPASSYESS 86 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~-~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~~~~~ 86 (199)
.++|+++.....||..+++.|+++|+++||+|++++...... ..... .++++..++.. .++.. .
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---------~g~~~~~~~~~--~~~~~----~ 70 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRIS--GLRGK----G 70 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCC--CCTTC----C
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---------cCCceEEecCC--ccCcC----c
Confidence 478999987777999999999999999999999999865321 11110 26777766531 22211 1
Q ss_pred chhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCc--hhHHHHHHHhCCCcEEEec
Q 046053 87 TTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFM--AFTITAAQRLGLPSALFFT 153 (199)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~--~~~~~vA~~lgIP~v~~~~ 153 (199)
....+..... . ... ...+..++++ .+||+|+++... .++..+++.+|+|++....
T Consensus 71 ~~~~~~~~~~-~-~~~-~~~l~~~l~~---------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~ 127 (364)
T 1f0k_A 71 IKALIAAPLR-I-FNA-WRQARAIMKA---------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ 127 (364)
T ss_dssp HHHHHTCHHH-H-HHH-HHHHHHHHHH---------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred cHHHHHHHHH-H-HHH-HHHHHHHHHh---------cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence 0000000000 0 011 1123333333 379999998643 2356677888999986544
No 22
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.41 E-value=0.02 Score=48.27 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=33.7
Q ss_pred CcceEEEEcC---C--------CcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 7 YKVHAVCIPS---P--------FQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 7 ~~~hvv~vp~---p--------~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
..++|+++.. | .-|+-..+..|++.|+++||+|++++....
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~ 70 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATR 70 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCC
Confidence 4689999985 3 258889999999999999999999987643
No 23
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=96.16 E-value=0.094 Score=43.68 Aligned_cols=39 Identities=10% Similarity=0.178 Sum_probs=31.2
Q ss_pred cceEEEEcC---C--CcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 8 KVHAVCIPS---P--FQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 8 ~~hvv~vp~---p--~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
+++|+++.. | .-|--.-+..|++.|+++||+|+++++..
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~ 45 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSH 45 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 578999873 2 34555679999999999999999999653
No 24
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=94.58 E-value=0.23 Score=40.63 Aligned_cols=110 Identities=7% Similarity=0.021 Sum_probs=65.5
Q ss_pred CcceEEEEcC--C--CcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCCC
Q 046053 7 YKVHAVCIPS--P--FQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLPASS 82 (199)
Q Consensus 7 ~~~hvv~vp~--p--~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~~ 82 (199)
++++|+++.. + .-|+-.-+..|++.| +||+|++++............ ...++++..++.. ..-
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~---~~~-- 69 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD------KTLDYEVIRWPRS---VML-- 69 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH------TTCSSEEEEESSS---SCC--
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc------cccceEEEEcccc---ccc--
Confidence 4577888864 3 458889999999999 799999999876543111110 1135777766541 110
Q ss_pred CCCCchhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCc--hhHHHHHHHhCCCcEEEecc
Q 046053 83 YESSTTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFM--AFTITAAQRLGLPSALFFTI 154 (199)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~--~~~~~vA~~lgIP~v~~~~~ 154 (199)
. ... . . ..+.+++++ .++|+|++.... .+...+++++|+|.+++..-
T Consensus 70 ---~---~~~-~---~------~~l~~~~~~---------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h 118 (394)
T 3okp_A 70 ---P---TPT-T---A------HAMAEIIRE---------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTH 118 (394)
T ss_dssp ---S---CHH-H---H------HHHHHHHHH---------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECC
T ss_pred ---c---chh-h---H------HHHHHHHHh---------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEec
Confidence 0 110 1 1 113344444 378999876433 34566789999996554433
No 25
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=94.36 E-value=0.81 Score=37.67 Aligned_cols=40 Identities=15% Similarity=0.096 Sum_probs=32.5
Q ss_pred CcceEEEEcCCCc-ccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 7 YKVHAVCIPSPFQ-SHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 7 ~~~hvv~vp~p~~-GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
.++.+....+|.. |.-.-+..|++.|+++||+|++++...
T Consensus 14 ~~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 54 (394)
T 2jjm_A 14 MKLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGL 54 (394)
T ss_dssp -CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred heeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 5788888888875 567888999999999999999998854
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=93.05 E-value=1.3 Score=36.24 Aligned_cols=37 Identities=14% Similarity=-0.009 Sum_probs=26.2
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhc-CcEEEEEeCCc
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHK-GFHITCVNTEF 46 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~-G~~VT~~t~~~ 46 (199)
++|+++... .+.......|+++|.++ ||++.++++..
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~ 43 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQ 43 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSS
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCC
Confidence 688888743 22334456789999988 89988877654
No 27
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=90.02 E-value=1.9 Score=35.12 Aligned_cols=36 Identities=11% Similarity=0.117 Sum_probs=26.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCc-EEEEEeCC
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGF-HITCVNTE 45 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~-~VT~~t~~ 45 (199)
++|+++... .++...+..|+++|.++|+ ++.++.+.
T Consensus 1 mkIl~v~~~-~~~~~~~~~l~~~L~~~g~~~~~v~~~~ 37 (384)
T 1vgv_A 1 MKVLTVFGT-RPEAIKMAPLVHALAKDPFFEAKVCVTA 37 (384)
T ss_dssp CEEEEEECS-HHHHHHHHHHHHHHHHSTTCEEEEEECC
T ss_pred CeEEEEecc-cHHHHHHHHHHHHHHhCCCCceEEEEcC
Confidence 467777543 5667788899999999984 87766553
No 28
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=89.07 E-value=0.34 Score=41.10 Aligned_cols=42 Identities=12% Similarity=0.055 Sum_probs=31.7
Q ss_pred CCCcceEEEEcCCCc-----ccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 5 LHYKVHAVCIPSPFQ-----SHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 5 ~~~~~hvv~vp~p~~-----GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
+...++|+++.-... |=.+-+.+|+++|+++||+|++++...
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 345688887764321 333568999999999999999999863
No 29
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=88.75 E-value=0.48 Score=40.57 Aligned_cols=39 Identities=10% Similarity=0.186 Sum_probs=32.6
Q ss_pred cceEEEEcC---C------------CcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 8 KVHAVCIPS---P------------FQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 8 ~~hvv~vp~---p------------~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
.++|+++.. | .-|.-.-+..|++.|+++||+|++++...
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 60 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRI 60 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCC
Confidence 478999874 2 35778899999999999999999998754
No 30
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=88.75 E-value=4.8 Score=32.45 Aligned_cols=103 Identities=10% Similarity=0.059 Sum_probs=64.8
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhc--CcEEEEEeCCchhhhhhhhcCCCCCCCCCCee-EEEeCCCCCCCCCCCCCC
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHK--GFHITCVNTEFNHRCFLKSRGHHSLDGLPNFR-FEAIPDGRDGLPASSYES 85 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~--G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~-f~~l~~~~~~~~~~~~~~ 85 (199)
++|+++..-+.|-+.=...+.+.|.++ |.+|++++.+...+-+. ..|.+. ++.++. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~---------~~p~i~~v~~~~~-----~~~---- 62 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLS---------RMPEVNEAIPMPL-----GHG---- 62 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHT---------TCTTEEEEEEC--------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh---------cCCccCEEEEecC-----Ccc----
Confidence 479999999889998888889999887 99999999986655332 124563 443321 100
Q ss_pred CchhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCchh-HHHHHHHhCCCcEEE
Q 046053 86 STTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAF-TITAAQRLGLPSALF 151 (199)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~-~~~vA~~lgIP~v~~ 151 (199)
...+ ..+.++.+.+++ .+||++| |....+ ...++...|+|..+.
T Consensus 63 --~~~~-------------~~~~~l~~~l~~------~~~D~vi-d~~~~~~sa~~~~~~~~~~~ig 107 (348)
T 1psw_A 63 --ALEI-------------GERRKLGHSLRE------KRYDRAY-VLPNSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp ----CH-------------HHHHHHHHHTTT------TTCSEEE-ECSCCSGGGHHHHHTTCSEEEE
T ss_pred --ccch-------------HHHHHHHHHHHh------cCCCEEE-ECCCChHHHHHHHHhCCCEEec
Confidence 0001 112345566654 4799988 654333 455777779997443
No 31
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=88.61 E-value=6.7 Score=29.92 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=63.1
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchh-----hhhhhhcCCCCCCCCCCeeEEEeCCCCCCCCCC
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNH-----RCFLKSRGHHSLDGLPNFRFEAIPDGRDGLPAS 81 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~-----~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~~~ 81 (199)
.+..|++++-++.|=..-.+.+|.+.+.+|.+|-|+...+.. ..+.. .. ++++..... ++.-.
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~--------~L-~v~~~~~g~---gf~~~ 94 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLE--------PH-GVEFQVMAT---GFTWE 94 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHG--------GG-TCEEEECCT---TCCCC
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHH--------hC-CcEEEEccc---ccccC
Confidence 456799999999999999999999999999999999654321 11111 11 477776654 34211
Q ss_pred CCCCCchhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCceEEEecCCch
Q 046053 82 SYESSTTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMA 135 (199)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~ 135 (199)
.++...- .......+..+.+.+.+ .++|+||.|-+..
T Consensus 95 ------~~~~~~~-----~~~a~~~l~~a~~~l~~------~~yDlvILDEi~~ 131 (196)
T 1g5t_A 95 ------TQNREAD-----TAACMAVWQHGKRMLAD------PLLDMVVLDELTY 131 (196)
T ss_dssp ------GGGHHHH-----HHHHHHHHHHHHHHTTC------TTCSEEEEETHHH
T ss_pred ------CCCcHHH-----HHHHHHHHHHHHHHHhc------CCCCEEEEeCCCc
Confidence 1111111 11223345555555543 4799999998644
No 32
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=87.99 E-value=0.73 Score=37.15 Aligned_cols=39 Identities=8% Similarity=0.034 Sum_probs=32.0
Q ss_pred cceEEEEcCC----------------CcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 8 KVHAVCIPSP----------------FQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 8 ~~hvv~vp~p----------------~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
.++|+++... .-|.-.-+..|++.|+++||+|++++...
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 3678887754 25777889999999999999999998764
No 33
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=87.67 E-value=0.54 Score=38.18 Aligned_cols=37 Identities=14% Similarity=0.284 Sum_probs=30.1
Q ss_pred eEEEEcC---CCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 10 HAVCIPS---PFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 10 hvv~vp~---p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
+|+++.. |.-|.-.-+..|++.|+++||+|++++...
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 41 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSW 41 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEE
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCC
Confidence 5666632 456788889999999999999999998753
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=86.11 E-value=12 Score=30.07 Aligned_cols=39 Identities=10% Similarity=0.030 Sum_probs=30.1
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhc-C-cEEEEEeCCch
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHK-G-FHITCVNTEFN 47 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~-G-~~VT~~t~~~~ 47 (199)
+++|+++.. ..++......++++|+++ | ++|.++++...
T Consensus 8 ~mkIl~v~~-~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~ 48 (375)
T 3beo_A 8 RLKVMTIFG-TRPEAIKMAPLVLELQKHPEKIESIVTVTAQH 48 (375)
T ss_dssp CEEEEEEEC-SHHHHHHHHHHHHHHTTCTTTEEEEEEECCSS
T ss_pred CceEEEEec-CcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCC
Confidence 478998873 367788888999999987 5 88887776543
No 35
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=85.29 E-value=1.2 Score=36.43 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=32.7
Q ss_pred CcceEEEEcC---CC-cccHHHHHHHHHHhhhcCcEEEEEeCCchh
Q 046053 7 YKVHAVCIPS---PF-QSHIKAMLQSAKLLHHKGFHITCVNTEFNH 48 (199)
Q Consensus 7 ~~~hvv~vp~---p~-~GH~~P~l~La~~La~~G~~VT~~t~~~~~ 48 (199)
+.++|+++.. +. -|+-.-+..|++.|+++||+|++++.....
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 64 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPH 64 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcc
Confidence 4678888873 22 466788999999999999999999987543
No 36
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=85.27 E-value=1.5 Score=36.28 Aligned_cols=41 Identities=15% Similarity=-0.028 Sum_probs=33.0
Q ss_pred CcceEEEEcCC--CcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 7 YKVHAVCIPSP--FQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 7 ~~~hvv~vp~p--~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
.+++|+++... .-|+-..+..|++.|+++||+|++++....
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 45788777553 358889999999999999999999887643
No 37
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=83.83 E-value=1.1 Score=39.52 Aligned_cols=40 Identities=10% Similarity=0.209 Sum_probs=30.5
Q ss_pred CCCcceEEEEcC---CC---cccHHHHHHHHHHhhhcCcEEEEEeC
Q 046053 5 LHYKVHAVCIPS---PF---QSHIKAMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 5 ~~~~~hvv~vp~---p~---~GH~~P~l~La~~La~~G~~VT~~t~ 44 (199)
.+..+||+++++ |. -|--.-+-.|+++|+++||+|+++++
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P 51 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISP 51 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEec
Confidence 456899999963 42 24445677899999999999999985
No 38
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=82.87 E-value=5.3 Score=37.14 Aligned_cols=31 Identities=16% Similarity=0.124 Sum_probs=21.3
Q ss_pred CCceEEEecCC-chh-HHHHHHHhCCCcEEEec
Q 046053 123 PAVSCIISDDF-MAF-TITAAQRLGLPSALFFT 153 (199)
Q Consensus 123 ~~~d~vI~D~~-~~~-~~~vA~~lgIP~v~~~~ 153 (199)
.+||+|.+-.. .++ +..+++.+|||.+...-
T Consensus 406 ~~PDVIHsH~~~sglva~llar~~gvP~V~T~H 438 (816)
T 3s28_A 406 GKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAH 438 (816)
T ss_dssp SCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECS
T ss_pred CCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEe
Confidence 47999987532 222 46778899999887543
No 39
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=82.00 E-value=1.7 Score=36.91 Aligned_cols=38 Identities=11% Similarity=0.166 Sum_probs=29.4
Q ss_pred ceEEEEcC---C---CcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 9 VHAVCIPS---P---FQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 9 ~hvv~vp~---p---~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
++|+++.. | .-|=-.-+..|++.|+++||+|++++...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 46777764 2 23555778899999999999999999754
No 40
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=80.47 E-value=2.1 Score=36.30 Aligned_cols=38 Identities=11% Similarity=0.096 Sum_probs=28.9
Q ss_pred ceEEEEcC---C---CcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 9 VHAVCIPS---P---FQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 9 ~hvv~vp~---p---~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
++|+++.. | .-|=-.-+..|++.|+++||+|++++...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 46777764 2 23444668899999999999999999754
No 41
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=80.19 E-value=9.6 Score=30.62 Aligned_cols=40 Identities=8% Similarity=0.142 Sum_probs=32.4
Q ss_pred cceEEEEcC--CCcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 8 KVHAVCIPS--PFQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 8 ~~hvv~vp~--p~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
..++++|.. ++.|=..-...||..|+.+|.+|-++-....
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r 144 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLR 144 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 445555554 6889999999999999999999999977653
No 42
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=78.76 E-value=6 Score=31.40 Aligned_cols=24 Identities=17% Similarity=0.191 Sum_probs=18.9
Q ss_pred HHHHHHHhhhcCcEEEEEeCCchhh
Q 046053 25 MLQSAKLLHHKGFHITCVNTEFNHR 49 (199)
Q Consensus 25 ~l~La~~La~~G~~VT~~t~~~~~~ 49 (199)
+..|++.|.+.| +|+++.+...+.
T Consensus 17 i~~L~~~l~~~g-~V~VvAP~~~~S 40 (251)
T 2wqk_A 17 INALREALKSLG-RVVVVAPDRNLS 40 (251)
T ss_dssp HHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred HHHHHHHHHhCC-CEEEEeeCCCCc
Confidence 667889998888 599888776654
No 43
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=77.16 E-value=3.3 Score=31.52 Aligned_cols=45 Identities=16% Similarity=0.036 Sum_probs=39.2
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhh
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCF 51 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~ 51 (199)
.+.+|++.+.++..|-....-++..|..+|++|.++......+.+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 467899999999999999999999999999999998876555444
No 44
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=75.68 E-value=2.6 Score=30.99 Aligned_cols=44 Identities=11% Similarity=0.182 Sum_probs=37.9
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhh
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHR 49 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~ 49 (199)
..+++|++.+.++.+|-.-..-++..|..+|++|.++......+
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e 59 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPE 59 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHH
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 35789999999999999999999999999999999987644333
No 45
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=75.07 E-value=28 Score=27.34 Aligned_cols=41 Identities=17% Similarity=0.230 Sum_probs=33.3
Q ss_pred CcceEEEEcC--CCcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 7 YKVHAVCIPS--PFQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 7 ~~~hvv~vp~--p~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
+..++++|.. ++.|=..-...||..|+++|.+|-++-....
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3456666654 6889999999999999999999999877643
No 46
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=74.97 E-value=3.6 Score=29.27 Aligned_cols=44 Identities=14% Similarity=0.065 Sum_probs=37.0
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhh
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCF 51 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~ 51 (199)
+++|++.+.++.+|-.-..=++..|..+|++|.++......+.+
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~ 46 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELF 46 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 57899999999999999999999999999999988764444333
No 47
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=74.17 E-value=3.7 Score=32.52 Aligned_cols=43 Identities=16% Similarity=0.177 Sum_probs=37.5
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchh
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNH 48 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~ 48 (199)
...++|++.+.++.+|-....-++..|.++|++|.++...-..
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~ 163 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPA 163 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCS
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 4568899999999999999999999999999999998754333
No 48
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=73.46 E-value=11 Score=30.16 Aligned_cols=27 Identities=22% Similarity=0.085 Sum_probs=23.1
Q ss_pred CCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 16 SPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 16 ~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
-=|.||+.=++.||++|. +|+|++...
T Consensus 12 ~IG~GHvmRcl~LA~~l~----~v~F~~~~~ 38 (282)
T 3hbm_A 12 QIGFGHIKRDLVLAKQYS----DVSFACLPL 38 (282)
T ss_dssp TTBSHHHHHHHHHHTTCS----SEEEEECCC
T ss_pred CccccHHHHHHHHHHHHH----hCEEEEecC
Confidence 347799999999999999 799998654
No 49
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=73.13 E-value=4.7 Score=31.05 Aligned_cols=46 Identities=13% Similarity=0.067 Sum_probs=38.9
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhh
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCF 51 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~ 51 (199)
..+.+|++.+.++..|-....-++..|..+|++|.++...-..+.+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 4568999999999999999999999999999999999775554444
No 50
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=70.92 E-value=6.4 Score=32.94 Aligned_cols=39 Identities=18% Similarity=0.178 Sum_probs=27.1
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEe--cCCchhHHHHHHHhCCCcEEEe
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIIS--DDFMAFTITAAQRLGLPSALFF 152 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~--D~~~~~~~~vA~~lgIP~v~~~ 152 (199)
..+++++++. +||+||+ |....|+..+|.++|||++.+.
T Consensus 84 ~~l~~~l~~~---------kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 84 EKVDEVLEKE---------KPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp HHHHHHHHHH---------CCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred HHHHHHHHhc---------CCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 3455666653 6887766 5555666778899999987664
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=70.82 E-value=41 Score=27.34 Aligned_cols=104 Identities=13% Similarity=0.046 Sum_probs=68.0
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhc--CcEEEEEeCCchhhhhhhhcCCCCCCCCCCee-EEEeCCCCCCCCCCCC
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHK--GFHITCVNTEFNHRCFLKSRGHHSLDGLPNFR-FEAIPDGRDGLPASSY 83 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~--G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~-f~~l~~~~~~~~~~~~ 83 (199)
+..+|+++-..+.|-+.=++.+.+.|.++ +.+|++++.+.+.+-++ ..|.++ ++.++. .
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~---------~~p~vd~vi~~~~-------~-- 68 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVME---------YNPNIDELIVVDK-------K-- 68 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTS---------SCTTCSEEEEECC-------S--
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh---------cCCCccEEEEeCc-------c--
Confidence 45789999999999999999999999888 99999999987765332 235675 454432 1
Q ss_pred CCCchhhHHHHHHHHHHhhhhHHHHHHHHHhhccCCCCCCCc-eEEEecCCch-hHHHHHHHhCCCcEE
Q 046053 84 ESSTTQDMYSLCENIINDVLLQPFLDLLAKLSDSSNNVNPAV-SCIISDDFMA-FTITAAQRLGLPSAL 150 (199)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~-d~vI~D~~~~-~~~~vA~~lgIP~v~ 150 (199)
.....+ . .+.++++++++ .+| |++| |.... -...++...|+|..+
T Consensus 69 --~~~~~~----~---------~~~~l~~~Lr~------~~y~D~vi-dl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 --GRHNSI----S---------GLNEVAREINA------KGKTDIVI-NLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --SHHHHH----H---------HHHHHHHHHHH------HCCCCEEE-ECCCSHHHHHHHHHHCCSEEE
T ss_pred --cccccH----H---------HHHHHHHHHhh------CCCCeEEE-ECCCChHHHHHHHHhCCCeEE
Confidence 000011 1 12234445543 378 9877 44333 356677888998644
No 52
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=70.43 E-value=7.7 Score=29.02 Aligned_cols=42 Identities=7% Similarity=-0.031 Sum_probs=32.7
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhh
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHR 49 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~ 49 (199)
...||++.-..+.|=+. ..+|.++|.++|++|.++.|+.-.+
T Consensus 4 m~k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~ 45 (175)
T 3qjg_A 4 MGENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRK 45 (175)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGG
T ss_pred CCCEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHH
Confidence 34677777666665554 8899999999999999999987554
No 53
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=68.80 E-value=3.9 Score=28.60 Aligned_cols=29 Identities=14% Similarity=0.011 Sum_probs=21.0
Q ss_pred CCceEEEecCCchh--HHHHHHH---hCCCcEEE
Q 046053 123 PAVSCIISDDFMAF--TITAAQR---LGLPSALF 151 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~---lgIP~v~~ 151 (199)
.+||+||.|..++. +.+++++ .++|.+.+
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 47999999998875 4555544 47996654
No 54
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=67.96 E-value=6.1 Score=27.92 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=24.2
Q ss_pred CCceEEEecCCchh--HHHHHHHh-------CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-------GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-------gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +.++++++ ++|.+.+...+
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 37999999998885 67777655 47876665544
No 55
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=66.86 E-value=6.5 Score=27.86 Aligned_cols=33 Identities=18% Similarity=0.269 Sum_probs=26.6
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
+.||+++ |.|++. ..+++.|.++|++|+++...
T Consensus 3 ~~~vlI~---G~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVC---GHSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEE---CCSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEE---CCCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4578877 347666 68899999999999999875
No 56
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=64.76 E-value=12 Score=27.35 Aligned_cols=45 Identities=16% Similarity=0.191 Sum_probs=34.6
Q ss_pred eEEEEcCCCcccHHH-HHHHHHHhhhcCcEEEEEeCCchhhhhhhh
Q 046053 10 HAVCIPSPFQSHIKA-MLQSAKLLHHKGFHITCVNTEFNHRCFLKS 54 (199)
Q Consensus 10 hvv~vp~p~~GH~~P-~l~La~~La~~G~~VT~~t~~~~~~~~~~~ 54 (199)
-++++-+|-.-=..| .+-|+..|..+||+|++..++.-.+-++.+
T Consensus 9 ~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 9 ALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp EEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred eeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 355566676666666 789999999999999999999876655443
No 57
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=64.72 E-value=12 Score=24.88 Aligned_cols=44 Identities=20% Similarity=0.187 Sum_probs=28.1
Q ss_pred HHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHh-------CCCcEEEecchh
Q 046053 107 FLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRL-------GLPSALFFTISA 156 (199)
Q Consensus 107 ~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~l-------gIP~v~~~~~~a 156 (199)
.++.++.+.+ .+||+||.|..++. +..+.+++ ++|++++....-
T Consensus 35 ~~~al~~l~~------~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 35 GQIALEKLSE------FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp HHHHHHHHTT------BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred HHHHHHHHHh------cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 3444555543 47999999987764 56666554 478777665443
No 58
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=64.29 E-value=4.4 Score=33.89 Aligned_cols=37 Identities=5% Similarity=-0.004 Sum_probs=25.9
Q ss_pred CcceEEEEc---CCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 7 YKVHAVCIP---SPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 7 ~~~hvv~vp---~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
.+++|++++ || .+.-.-...+++.|+++| +|++++..
T Consensus 13 ~~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 13 RRPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CCSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CCceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 358899887 55 222222356788999999 99999554
No 59
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=61.22 E-value=14 Score=28.34 Aligned_cols=43 Identities=5% Similarity=-0.104 Sum_probs=35.2
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhh
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCF 51 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~ 51 (199)
+.||++.-..+.|-+. ..+|.++|.++|++|.++.|+.-.+.+
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi 46 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM 46 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence 4678777777777777 889999999999999999998765544
No 60
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=60.84 E-value=13 Score=28.14 Aligned_cols=49 Identities=12% Similarity=0.170 Sum_probs=36.6
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEecchhHHHHHH
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFTISACSFKGL 162 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~a~~~~~~ 162 (199)
+.++..++++.+ .++++||-|. .+...|+++|+|.+.+.++--+-..++
T Consensus 129 ~e~~~~i~~l~~------~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eSI~~Ai 177 (196)
T 2q5c_A 129 DEITTLISKVKT------ENIKIVVSGK---TVTDEAIKQGLYGETINSGEESLRRAI 177 (196)
T ss_dssp GGHHHHHHHHHH------TTCCEEEECH---HHHHHHHHTTCEEEECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHH------CCCeEEECCH---HHHHHHHHcCCcEEEEecCHHHHHHHH
Confidence 466777788766 4799999984 358899999999998888554444443
No 61
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=60.83 E-value=22 Score=28.48 Aligned_cols=56 Identities=14% Similarity=0.182 Sum_probs=42.5
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHhCCCcEEEecchhHHHHHHHhHH
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRLGLPSALFFTISACSFKGLKQFQ 166 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~lgIP~v~~~~~~a~~~~~~~~~~ 166 (199)
..+.++++.+++ .++.||+++..... +..+|++.|++.+.+.+.+..++.++.+.-
T Consensus 224 ~~l~~l~~~ik~------~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~~Y~~~m~~n~ 281 (291)
T 1pq4_A 224 QELKQLIDTAKE------NNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLAADWSSNLKAVA 281 (291)
T ss_dssp HHHHHHHHHHHT------TTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHH------cCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCchhhHHHHHHHHH
Confidence 456677776665 47899999987664 688999999999998888776666665443
No 62
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=60.55 E-value=16 Score=28.48 Aligned_cols=41 Identities=20% Similarity=0.145 Sum_probs=36.5
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
..+..|++.--||.|=..-++.+|.+|+++|++|.++..+.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 34678888888999999999999999999999998888765
No 63
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=59.62 E-value=64 Score=25.55 Aligned_cols=40 Identities=5% Similarity=0.121 Sum_probs=32.2
Q ss_pred cceEEEEcC--CCcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 8 KVHAVCIPS--PFQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 8 ~~hvv~vp~--p~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
+.++++|.. ++.|=..-...||..|+.+|.+|.++-....
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 345555544 7889999999999999999999999977654
No 64
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=59.43 E-value=13 Score=25.21 Aligned_cols=34 Identities=18% Similarity=0.146 Sum_probs=25.4
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
.++|+++ |.|.+.- .+++.|+++|++|+++....
T Consensus 4 ~m~i~Ii---G~G~iG~--~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIA---GIGRVGY--TLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEE---CCSHHHH--HHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEE---CCCHHHH--HHHHHHHhCCCeEEEEECCH
Confidence 4678887 4477654 57899999999999987643
No 65
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=58.10 E-value=16 Score=28.01 Aligned_cols=41 Identities=15% Similarity=0.042 Sum_probs=34.3
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhh
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRC 50 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~ 50 (199)
..||++.-..+.|-+. ..+|.++|.++| +|.++.|+.-.+.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~f 59 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHF 59 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGT
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHh
Confidence 5688888888888776 899999999999 9999999875543
No 66
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=57.63 E-value=19 Score=31.54 Aligned_cols=115 Identities=14% Similarity=0.143 Sum_probs=57.9
Q ss_pred CCCCCCC-cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhhhcCCCCCCCCCCeeEEEeCCCCCCCC
Q 046053 1 MAISLHY-KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLKSRGHHSLDGLPNFRFEAIPDGRDGLP 79 (199)
Q Consensus 1 ~~~~~~~-~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~~~~~~~~~~~~~i~f~~l~~~~~~~~ 79 (199)
|.++... +++-+++... +=.-++.+++.|.+.|+++. .|....+.++.. +|....+.+.. ++|
T Consensus 1 ~~~~~~~~~i~~aLISVs---DK~glvelAk~L~~lGfeI~--ATgGTak~L~e~----------GI~v~~V~~vT-gfP 64 (523)
T 3zzm_A 1 MSTDDGRRPIRRALISVY---DKTGLVDLAQGLSAAGVEII--STGSTAKTIADT----------GIPVTPVEQLT-GFP 64 (523)
T ss_dssp ---CCCCCCCCEEEEEES---SCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT----------TCCCEEHHHHH-SCC
T ss_pred CCcccccccccEEEEEEe---ccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc----------CCceeeccccC-CCc
Confidence 4454333 3455666663 34458899999999999764 777777666542 45544444211 444
Q ss_pred CCCCCCCchhhHHHHHHHHHHhh-hhHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHH
Q 046053 80 ASSYESSTTQDMYSLCENIINDV-LLQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITA 140 (199)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~v 140 (199)
+-.+..--+-+ ..+....+.++ .....+++ ++..- .++|+||++. .++-.-+
T Consensus 65 Eil~GRVKTLH-P~ihgGiLa~r~~~~h~~~l-~~~~i------~~iDlVvvNL-YPF~~tv 117 (523)
T 3zzm_A 65 EVLDGRVKTLH-PRVHAGLLADLRKSEHAAAL-EQLGI------EAFELVVVNL-YPFSQTV 117 (523)
T ss_dssp CCTTTTSSSCS-HHHHHHHHCCTTSHHHHHHH-HHHTC------CCCSEEEEEC-CCHHHHH
T ss_pred hhhCCccccCC-chhhhhhccCCCCHHHHHHH-HHCCC------CceeEEEEeC-CChHHHH
Confidence 42210001111 22222221222 22344444 34322 5899999995 4544434
No 67
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=56.58 E-value=12 Score=31.10 Aligned_cols=29 Identities=17% Similarity=0.154 Sum_probs=20.8
Q ss_pred CceEEEe--cCCchhH-HHHHHHhCCCcEEEe
Q 046053 124 AVSCIIS--DDFMAFT-ITAAQRLGLPSALFF 152 (199)
Q Consensus 124 ~~d~vI~--D~~~~~~-~~vA~~lgIP~v~~~ 152 (199)
+||+|++ |....|+ ..+|+.+|||++.+.
T Consensus 111 kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ 142 (396)
T 3dzc_A 111 QPDVVLVHGDTATTFAASLAAYYQQIPVGHVE 142 (396)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 6898876 4444454 667889999988763
No 68
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=55.01 E-value=20 Score=24.19 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=22.0
Q ss_pred CCceEEEecCCchh--HHHHHHHh-------CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-------GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-------gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +..+.+++ ++|.+++....
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 47999999987764 45555433 57777665543
No 69
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=54.76 E-value=22 Score=27.38 Aligned_cols=49 Identities=10% Similarity=0.068 Sum_probs=32.7
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEecch
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFTIS 155 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~ 155 (199)
..++++++..... .....+.+||+|---..+...|+++|||++.+-+..
T Consensus 14 snl~ali~~~~~~--~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~~~~ 62 (211)
T 3p9x_A 14 TNAEAIIQSQKAG--QLPCEVALLITDKPGAKVVERVKVHEIPVCALDPKT 62 (211)
T ss_dssp HHHHHHHHHHHTT--CCSSEEEEEEESCSSSHHHHHHHTTTCCEEECCGGG
T ss_pred hHHHHHHHHHHcC--CCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeChhh
Confidence 3466666654321 000358899999654567889999999998876643
No 70
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=53.79 E-value=9.1 Score=33.19 Aligned_cols=36 Identities=11% Similarity=0.212 Sum_probs=28.1
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
+.++|||++-...-| +.+|++|+++|++||++....
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 457899998654444 578999999999999997654
No 71
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=53.43 E-value=9.5 Score=27.04 Aligned_cols=36 Identities=17% Similarity=0.135 Sum_probs=26.5
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
.++++|.- |. =+.|++.+++.|.++|.+|+++ ...+
T Consensus 19 ~~~llIaG-G~-GiaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIGA-YT-GIVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEEE-TT-HHHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CeEEEEEC-cC-cHHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 45555542 22 3799999999999999999998 5443
No 72
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=51.91 E-value=28 Score=24.28 Aligned_cols=42 Identities=7% Similarity=-0.066 Sum_probs=30.7
Q ss_pred cceEEEEcCCC---cccHHHHHHHHHHhhhcCcEEEEEeCCchhh
Q 046053 8 KVHAVCIPSPF---QSHIKAMLQSAKLLHHKGFHITCVNTEFNHR 49 (199)
Q Consensus 8 ~~hvv~vp~p~---~GH~~P~l~La~~La~~G~~VT~~t~~~~~~ 49 (199)
..+++++-+-+ .......+.+|...++.|++|+++-+..-..
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~ 59 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPX 59 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHH
Confidence 34455444433 5667889999999999999999988876543
No 73
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=51.33 E-value=17 Score=24.80 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=22.1
Q ss_pred CCceEEEecCCchh--HHHHHHHh---------CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL---------GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l---------gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +.++.+++ .+|.+++....
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 47999999987664 55565544 26777665543
No 74
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=51.27 E-value=22 Score=27.06 Aligned_cols=42 Identities=5% Similarity=-0.072 Sum_probs=32.7
Q ss_pred eEEEEcCCCcccHHHHHHHHHHhhhc-CcEEEEEeCCchhhhhh
Q 046053 10 HAVCIPSPFQSHIKAMLQSAKLLHHK-GFHITCVNTEFNHRCFL 52 (199)
Q Consensus 10 hvv~vp~p~~GH~~P~l~La~~La~~-G~~VT~~t~~~~~~~~~ 52 (199)
+|++.-..+.|-+. ..+|.++|.++ |++|.++.|+.-.+.+.
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 56666666666655 89999999999 99999999987655443
No 75
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=50.85 E-value=18 Score=32.30 Aligned_cols=45 Identities=9% Similarity=-0.051 Sum_probs=39.3
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhh
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCF 51 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~ 51 (199)
...+|++.+.++..|-....-++..|..+|++|.++...-..+.+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 478999999999999999999999999999999998776555444
No 76
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=50.76 E-value=29 Score=22.64 Aligned_cols=34 Identities=9% Similarity=0.168 Sum_probs=22.5
Q ss_pred CCceEEEecCCchh--HHHHHHH----hCCCcEEEecchh
Q 046053 123 PAVSCIISDDFMAF--TITAAQR----LGLPSALFFTISA 156 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~----lgIP~v~~~~~~a 156 (199)
.+||+||.|..++. +..+.++ .++|.+++....-
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 47999999987664 4445443 3678776655443
No 77
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A*
Probab=50.54 E-value=26 Score=31.88 Aligned_cols=45 Identities=9% Similarity=0.180 Sum_probs=34.4
Q ss_pred CCCCcceEEEEcCCCc---ccHHHHHH-HHHHhhhc-CcEEEEEeCCchh
Q 046053 4 SLHYKVHAVCIPSPFQ---SHIKAMLQ-SAKLLHHK-GFHITCVNTEFNH 48 (199)
Q Consensus 4 ~~~~~~hvv~vp~p~~---GH~~P~l~-La~~La~~-G~~VT~~t~~~~~ 48 (199)
++.+..||+..|..+. ||..|++. |.+.+... ||+|+++.+....
T Consensus 378 ~~~~~l~~~~~ps~g~lHLGh~v~~~k~l~~~~~~~~g~~v~ilIaD~~A 427 (690)
T 3p0j_A 378 APAKPHACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEGTVTLVLPDWSA 427 (690)
T ss_dssp CCSSCEEEEECCCCSSCBHHHHHHHHHHHHHHHHHCSSCEEEEEECTTHH
T ss_pred CCCCcceEEecCCCCCcccchHHHHHHHHHHHHHHcCCCeEEEEEecchh
Confidence 3456788999997776 88999998 66555443 9999999987654
No 78
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=48.37 E-value=20 Score=29.94 Aligned_cols=38 Identities=11% Similarity=-0.049 Sum_probs=25.5
Q ss_pred HHHHHHHHhhccCCCCCCCceEEEe--cCCchh-HHHHHHHhCCCcEEEe
Q 046053 106 PFLDLLAKLSDSSNNVNPAVSCIIS--DDFMAF-TITAAQRLGLPSALFF 152 (199)
Q Consensus 106 ~~~~ll~~l~~~~~~~~~~~d~vI~--D~~~~~-~~~vA~~lgIP~v~~~ 152 (199)
.+.+++++. +||+|++ |....+ +..+|+++|||.+.+.
T Consensus 105 ~l~~~l~~~---------kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 105 GINEVIAAE---------NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp HHHHHHHHH---------CCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHc---------CCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 355566553 6898776 334445 4678899999987665
No 79
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=47.52 E-value=11 Score=29.50 Aligned_cols=32 Identities=19% Similarity=0.217 Sum_probs=22.2
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeC
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~ 44 (199)
++|++.- +.|.+- -+|+++|.++||+|+.++-
T Consensus 1 MkILVTG--atGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGG--GTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 3554433 334443 4689999999999999874
No 80
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=47.17 E-value=42 Score=26.73 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=34.2
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHhCCCcEEEecc
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRLGLPSALFFTI 154 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~lgIP~v~~~~~ 154 (199)
..+.++++.+++ .++.||+++....- +..+|++.|++.+.+.+.
T Consensus 215 ~~l~~l~~~ik~------~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~pl 260 (286)
T 3gi1_A 215 RQLKEIQDFVKE------YNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSPL 260 (286)
T ss_dssp HHHHHHHHHHHH------TTCCEEEECTTSCTHHHHHHHHTTTCEEEECCCS
T ss_pred HHHHHHHHHHHH------cCCCEEEEeCCCChHHHHHHHHHhCCeEEEeccc
Confidence 466777777765 47999999986664 588999999999987654
No 81
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=46.96 E-value=11 Score=27.80 Aligned_cols=18 Identities=22% Similarity=0.405 Sum_probs=15.9
Q ss_pred HHHHHHhhhcCcEEEEEe
Q 046053 26 LQSAKLLHHKGFHITCVN 43 (199)
Q Consensus 26 l~La~~La~~G~~VT~~t 43 (199)
+-+|..|+++|++|+++=
T Consensus 15 L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEE
Confidence 678899999999999984
No 82
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=46.77 E-value=30 Score=26.49 Aligned_cols=46 Identities=15% Similarity=0.218 Sum_probs=29.9
Q ss_pred HHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEec
Q 046053 106 PFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFT 153 (199)
Q Consensus 106 ~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 153 (199)
.++++++.+.+. .....+.+||+|---..+...|+++|||++.+-.
T Consensus 20 nl~all~~~~~~--~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~ 65 (209)
T 4ds3_A 20 NMEALIRAAQAP--GFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKR 65 (209)
T ss_dssp HHHHHHHHHTST--TCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCG
T ss_pred HHHHHHHHHHcC--CCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCc
Confidence 455566555331 0002578999985333467899999999998764
No 83
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=46.71 E-value=48 Score=21.60 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=21.6
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +.++.+++ ++|.+++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 47899999987653 44454443 57777765543
No 84
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=46.10 E-value=34 Score=26.45 Aligned_cols=41 Identities=7% Similarity=0.229 Sum_probs=33.2
Q ss_pred hHHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEec
Q 046053 104 LQPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFT 153 (199)
Q Consensus 104 ~~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 153 (199)
.+..+..++++.+ .++++||-|. .+...|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~------~G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKA------NGTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHH------TTCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHH------CCCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 4577888888876 3799999984 358899999999998884
No 85
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=45.76 E-value=93 Score=23.35 Aligned_cols=31 Identities=13% Similarity=0.023 Sum_probs=27.4
Q ss_pred CCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 16 SPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 16 ~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
-.|.|=..-...||..|+++|.+|-++=...
T Consensus 11 kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 11 KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3777999999999999999999999987765
No 86
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=45.59 E-value=11 Score=32.51 Aligned_cols=36 Identities=14% Similarity=0.008 Sum_probs=27.6
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
++++||+++-+.-.| ..||+.|.+.||+||++-...
T Consensus 1 ~~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 1 SNAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp -CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESCH
T ss_pred CCcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 367888887665555 468999999999999997654
No 87
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=44.67 E-value=68 Score=24.88 Aligned_cols=35 Identities=11% Similarity=0.100 Sum_probs=28.2
Q ss_pred eEEEEcC--CCcccHHHHHHHHHHhhhcCcEEEEEeC
Q 046053 10 HAVCIPS--PFQSHIKAMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 10 hvv~vp~--p~~GH~~P~l~La~~La~~G~~VT~~t~ 44 (199)
+.++|.. ++.|=..-.+.|++.|+++|.+|.++-+
T Consensus 22 k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 22 HMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp EEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 3444443 6778999999999999999999999863
No 88
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=44.66 E-value=28 Score=28.32 Aligned_cols=37 Identities=5% Similarity=0.046 Sum_probs=27.2
Q ss_pred ceEEEEc--CCC-cccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 9 VHAVCIP--SPF-QSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 9 ~hvv~vp--~p~-~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
++|+++. +|. -|.-.-+..|+++|+++ |+|++++...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 3566663 233 35567789999999999 9999987543
No 89
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=44.52 E-value=26 Score=28.38 Aligned_cols=34 Identities=18% Similarity=0.116 Sum_probs=27.7
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
..||.|+-..+.| |-.+|+.|+++|++|+..=..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 4578888888877 556999999999999997553
No 90
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=44.49 E-value=34 Score=25.66 Aligned_cols=43 Identities=9% Similarity=0.009 Sum_probs=34.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhh
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFL 52 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~ 52 (199)
.||++.-..+.|-+ =..+|.++|.++|++|.++.|+.-.+.+.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 46777777777755 47899999999999999999987655443
No 91
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=44.49 E-value=15 Score=26.49 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=27.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchh
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNH 48 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~ 48 (199)
.+++++. .|.| +.|++.+++.|.++|.+|+++ ...+.
T Consensus 24 ~~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CeEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 3555554 3334 899999999999999999999 54443
No 92
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=43.66 E-value=39 Score=25.71 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=25.4
Q ss_pred CceEEEecCCchhHHHHHHHhCCCcEEEecc
Q 046053 124 AVSCIISDDFMAFTITAAQRLGLPSALFFTI 154 (199)
Q Consensus 124 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~ 154 (199)
.+.+||++.--..+...|+++|||++.+.+.
T Consensus 29 ~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 59 (209)
T 1meo_A 29 QIDIVISNKAAVAGLDKAERAGIPTRVINHK 59 (209)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCCEEECCGG
T ss_pred EEEEEEeCCCChHHHHHHHHcCCCEEEECcc
Confidence 5788999976666788999999999987654
No 93
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=43.07 E-value=36 Score=26.14 Aligned_cols=31 Identities=19% Similarity=0.341 Sum_probs=24.6
Q ss_pred CceEEEecCCchhHHHHHHHhCCCcEEEecc
Q 046053 124 AVSCIISDDFMAFTITAAQRLGLPSALFFTI 154 (199)
Q Consensus 124 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~ 154 (199)
.+.+||+|---..+...|+++|||++.+.+.
T Consensus 33 eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~ 63 (215)
T 3tqr_A 33 EIRAVISNRADAYGLKRAQQADIPTHIIPHE 63 (215)
T ss_dssp EEEEEEESCTTCHHHHHHHHTTCCEEECCGG
T ss_pred EEEEEEeCCcchHHHHHHHHcCCCEEEeCcc
Confidence 5889999865445678999999999987543
No 94
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=42.38 E-value=38 Score=26.87 Aligned_cols=55 Identities=9% Similarity=0.115 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHhCCCcEEEecchh------HHHHHHHhH
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRLGLPSALFFTISA------CSFKGLKQF 165 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~lgIP~v~~~~~~a------~~~~~~~~~ 165 (199)
..+.++++.+++ .++.||+++..... +..+|++.|++.+.+.+... .++.+|.+.
T Consensus 213 ~~l~~l~~~ik~------~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~~l~~~~~~~~~Y~~~m~~n 275 (284)
T 3cx3_A 213 RQLTEIQEFVKT------YKVKTIFTESNASSKVAETLVKSTGVGLKTLNPLESDPQNDKTYLENLEEN 275 (284)
T ss_dssp HHHHHHHHHHHH------TTCCCEEECSSSCCHHHHHHHSSSSCCEEECCCSSSCCCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHH------cCCCEEEEeCCCCcHHHHHHHHHcCCeEEEecCcccCCCCcccHHHHHHHH
Confidence 456677766665 47899999987664 68899999999988765432 455555443
No 95
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=42.17 E-value=1.4e+02 Score=24.50 Aligned_cols=26 Identities=27% Similarity=0.464 Sum_probs=19.2
Q ss_pred CCceEEEe--cCCchhHHHHHHHhCCCc
Q 046053 123 PAVSCIIS--DDFMAFTITAAQRLGLPS 148 (199)
Q Consensus 123 ~~~d~vI~--D~~~~~~~~vA~~lgIP~ 148 (199)
.++|.||. |.....+..+|++||+|.
T Consensus 74 ~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 74 FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 47888875 445556677899999984
No 96
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=42.11 E-value=43 Score=22.96 Aligned_cols=33 Identities=24% Similarity=0.233 Sum_probs=20.8
Q ss_pred CCceEEEecCCchh--HHHHHHH-------hCCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQR-------LGLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~-------lgIP~v~~~~~~ 155 (199)
.+||+||.|..++. +..+.++ -++|++++....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 50 TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 47999999986553 4444433 257777666543
No 97
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=41.59 E-value=36 Score=29.95 Aligned_cols=30 Identities=20% Similarity=0.268 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhhhcCcEEEEEeCCchhhhhhh
Q 046053 22 IKAMLQSAKLLHHKGFHITCVNTEFNHRCFLK 53 (199)
Q Consensus 22 ~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~ 53 (199)
=.-++.+|+.|.+.|++|. .|....+.++.
T Consensus 34 K~glv~~Ak~L~~lGfeI~--ATgGTak~L~e 63 (534)
T 4ehi_A 34 KEGIVEFGKELENLGFEIL--STGGTFKLLKE 63 (534)
T ss_dssp CTTHHHHHHHHHHTTCEEE--ECHHHHHHHHH
T ss_pred cccHHHHHHHHHHCCCEEE--EccHHHHHHHH
Confidence 3447899999999999764 77777766655
No 98
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=41.52 E-value=20 Score=29.00 Aligned_cols=29 Identities=21% Similarity=0.184 Sum_probs=21.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEE
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCV 42 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~ 42 (199)
+||++|-..--| +-+|..|+++|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 577777443333 66788999999999998
No 99
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=41.01 E-value=31 Score=26.01 Aligned_cols=41 Identities=10% Similarity=-0.141 Sum_probs=31.6
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhh
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHR 49 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~ 49 (199)
..||++.-..+.|=+. ..+|.++|.++|++|.++.|+.-.+
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~ 48 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAED 48 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHH
Confidence 4567666666665554 7899999999999999999986544
No 100
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=40.28 E-value=26 Score=28.08 Aligned_cols=34 Identities=12% Similarity=0.116 Sum_probs=25.4
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeC
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~ 44 (199)
.+..+|.|+-....|. .+|+.|+++||+|+++.-
T Consensus 3 ~Ms~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~dr 36 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGT-----PIAEILLEAGYELVVWNR 36 (297)
T ss_dssp -CCCEEEEECCSTTHH-----HHHHHHHHTTCEEEEC--
T ss_pred CCCCcEEEEecHHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 4445788887777774 579999999999999753
No 101
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=39.49 E-value=39 Score=25.96 Aligned_cols=46 Identities=24% Similarity=0.349 Sum_probs=29.6
Q ss_pred HHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEec
Q 046053 106 PFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFT 153 (199)
Q Consensus 106 ~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 153 (199)
.++++++.+.+. +....+.+||+|---..+...|+++|||++.+-+
T Consensus 21 nl~all~~~~~~--~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~ 66 (215)
T 3kcq_A 21 NLEALAKAFSTE--ESSVVISCVISNNAEARGLLIAQSYGIPTFVVKR 66 (215)
T ss_dssp HHHHHHHHTCCC---CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCB
T ss_pred HHHHHHHHHHcC--CCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCc
Confidence 455566655331 0002578999985333467899999999998754
No 102
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=38.98 E-value=48 Score=22.13 Aligned_cols=32 Identities=13% Similarity=0.204 Sum_probs=20.8
Q ss_pred CCceEEEecCCchh--HHHHHHHh-------CCCcEEEecc
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-------GLPSALFFTI 154 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-------gIP~v~~~~~ 154 (199)
.+||+||.|..++. +.++.+++ ++|.+++...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 36899999987653 44454443 4677766554
No 103
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=38.91 E-value=37 Score=25.29 Aligned_cols=40 Identities=5% Similarity=-0.101 Sum_probs=30.3
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhh
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHR 49 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~ 49 (199)
.||++.-..+.|=+ =..+|.++|.++|++|.++.|+.-.+
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~ 42 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKN 42 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHH
Confidence 35665555555544 57899999999999999999987554
No 104
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=38.49 E-value=53 Score=25.99 Aligned_cols=46 Identities=9% Similarity=0.207 Sum_probs=34.2
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHhCCCcEEEecchh
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRLGLPSALFFTISA 156 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~lgIP~v~~~~~~a 156 (199)
..+.++++.+++ .++.||+++..... +..+|++.|++.+.+.+.+.
T Consensus 210 ~~l~~l~~~ik~------~~v~~if~e~~~~~~~~~~ia~~~g~~v~~ld~l~~ 257 (284)
T 2prs_A 210 QRLHEIRTQLVE------QKATCVFAEPQFRPAVVESVARGTSVRMGTLDPLGT 257 (284)
T ss_dssp HHHHHHHHHHHH------TTCCEEEECTTSCSHHHHHHTTTSCCEEEECCTTCT
T ss_pred HHHHHHHHHHHH------cCCCEEEEeCCCChHHHHHHHHHcCCeEEEeccCcc
Confidence 355666666655 47899999987654 68899999999988766543
No 105
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=38.38 E-value=59 Score=21.42 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=20.6
Q ss_pred CCceEEEecCCch-------hHHHHHHHh-----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMA-------FTITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~-------~~~~vA~~l-----gIP~v~~~~~~ 155 (199)
.+||+||.|...+ .+..+.+++ ++|++++....
T Consensus 46 ~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 46 ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 3699999998654 233333332 57877776544
No 106
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=38.02 E-value=58 Score=25.72 Aligned_cols=43 Identities=9% Similarity=0.041 Sum_probs=37.5
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhc--CcEEEEEeCCchhhhh
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHK--GFHITCVNTEFNHRCF 51 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~--G~~VT~~t~~~~~~~~ 51 (199)
++|+++-..+.|-+.=...+.+.|.++ +.+|++++.+.+.+-+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~ 45 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIP 45 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHH
Confidence 479999999999999999999999888 9999999998776543
No 107
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=37.65 E-value=66 Score=25.92 Aligned_cols=44 Identities=16% Similarity=0.201 Sum_probs=34.6
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHhCCCcEEEecc
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRLGLPSALFFTI 154 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~lgIP~v~~~~~ 154 (199)
..+.++++.+++ .++.||+++..... +..+|++.|++.+.+.+.
T Consensus 226 ~~l~~l~~~ik~------~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~l 271 (312)
T 2o1e_A 226 ASLAKLKTYAKE------HNVKVIYFEEIASSKVADTLASEIGAKTEVLNTL 271 (312)
T ss_dssp HHHHHHHHHTTS------SCCCEEECSSCCCHHHHHHHHHHTCCEEECCCCT
T ss_pred HHHHHHHHHHHH------cCCCEEEEeCCCChHHHHHHHHHhCCcEEEeccc
Confidence 456777777655 47899999987764 688999999999887654
No 108
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=37.59 E-value=42 Score=25.45 Aligned_cols=40 Identities=15% Similarity=-0.043 Sum_probs=30.4
Q ss_pred cceEEEEcCCCcccHH-HHHHHHHHhhhcCcEEEEEeCCchh
Q 046053 8 KVHAVCIPSPFQSHIK-AMLQSAKLLHHKGFHITCVNTEFNH 48 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~-P~l~La~~La~~G~~VT~~t~~~~~ 48 (199)
..||++.-..+ +... =..+|.++|.++|++|+++.|+.-.
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 45666555444 5555 6899999999999999999987644
No 109
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=37.53 E-value=34 Score=25.61 Aligned_cols=37 Identities=8% Similarity=-0.086 Sum_probs=30.9
Q ss_pred eEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 10 HAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 10 hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
+|++..-+|.|=..-...||..|+++|.+|-++=...
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5666666777888999999999999999999986654
No 110
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=37.41 E-value=55 Score=22.22 Aligned_cols=33 Identities=15% Similarity=0.114 Sum_probs=20.4
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
.+||+||.|...+. +..+.+++ ++|++++....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 50 TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 46899999986542 34444333 57777665544
No 111
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=36.99 E-value=49 Score=25.28 Aligned_cols=29 Identities=7% Similarity=0.130 Sum_probs=25.8
Q ss_pred CCCcccHHHHHHHHHHhhhcCcEEEEEeC
Q 046053 16 SPFQSHIKAMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 16 ~p~~GH~~P~l~La~~La~~G~~VT~~t~ 44 (199)
-++.|=..-.+.|++.|+++|.+|.++-+
T Consensus 13 ~t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 13 DTEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp SSSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 36779999999999999999999999753
No 112
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=36.94 E-value=24 Score=24.48 Aligned_cols=38 Identities=11% Similarity=-0.000 Sum_probs=28.0
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchh
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNH 48 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~ 48 (199)
..+.||+++-+.-.| ..+++.|.++|++|+++......
T Consensus 5 ~~~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~~~ 42 (140)
T 3fwz_A 5 DICNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSRTR 42 (140)
T ss_dssp CCCSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCHHH
T ss_pred cCCCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCHHH
Confidence 345788888653333 46789999999999999876543
No 113
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=36.82 E-value=55 Score=20.94 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=21.0
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
+||+||.|..++. +.++.+++ ++|.+++....
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 6899999987653 44454443 57777665543
No 114
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=36.79 E-value=45 Score=22.09 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=22.0
Q ss_pred CceEEEecCCch---hHHHHHHH----hCCCcEEEecchh
Q 046053 124 AVSCIISDDFMA---FTITAAQR----LGLPSALFFTISA 156 (199)
Q Consensus 124 ~~d~vI~D~~~~---~~~~vA~~----lgIP~v~~~~~~a 156 (199)
+||+||.|...+ .+..+.++ .++|++++....-
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 699999997653 24444444 3788887766543
No 115
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=36.57 E-value=49 Score=25.17 Aligned_cols=42 Identities=17% Similarity=0.150 Sum_probs=30.7
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhh-cCcEEEEEeCCchhh
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHH-KGFHITCVNTEFNHR 49 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~-~G~~VT~~t~~~~~~ 49 (199)
...||++.-..+.+=+ =..+|.++|.+ +|++|.++.|+.-.+
T Consensus 18 ~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~ 60 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKH 60 (206)
T ss_dssp SSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGG
T ss_pred CCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHH
Confidence 3467777766666644 45899999999 899999999987554
No 116
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=36.43 E-value=89 Score=20.75 Aligned_cols=44 Identities=11% Similarity=0.035 Sum_probs=26.6
Q ss_pred HHHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHh-------CCCcEEEecch
Q 046053 106 PFLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRL-------GLPSALFFTIS 155 (199)
Q Consensus 106 ~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~l-------gIP~v~~~~~~ 155 (199)
...+.++.+.. .+||+||.|..++. +..+.+++ ++|++++....
T Consensus 39 ~~~~a~~~l~~------~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 39 NGAKALYQVQQ------AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp SHHHHHHHHTT------CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred CHHHHHHHhhc------CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 34455555543 47999999987654 44444332 47777666543
No 117
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=36.26 E-value=65 Score=21.01 Aligned_cols=35 Identities=14% Similarity=0.016 Sum_probs=22.1
Q ss_pred CCceEEEecCCchh--HHHHHHHh------CCCcEEEecchhH
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL------GLPSALFFTISAC 157 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l------gIP~v~~~~~~a~ 157 (199)
.+||+||.|..++. +..+.+++ ..|.+++.+....
T Consensus 49 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~~~ 91 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGLDK 91 (132)
T ss_dssp TCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCSCS
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCCCh
Confidence 47899999987654 45555443 3566666655433
No 118
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=36.16 E-value=72 Score=20.18 Aligned_cols=32 Identities=16% Similarity=0.035 Sum_probs=20.4
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecc
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTI 154 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~ 154 (199)
.+||+||.|..++. +..+.+++ ++|.+++...
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 36899999986653 44444433 4777766554
No 119
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=36.11 E-value=36 Score=26.00 Aligned_cols=39 Identities=8% Similarity=-0.134 Sum_probs=27.3
Q ss_pred ceEEEEcCCCcccHHH-HHHHHHHhhhcCcEEEEEeCCchh
Q 046053 9 VHAVCIPSPFQSHIKA-MLQSAKLLHHKGFHITCVNTEFNH 48 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P-~l~La~~La~~G~~VT~~t~~~~~ 48 (199)
.||++.-..+ +...- ..+|.++|.++|++|.++.|+.-.
T Consensus 6 k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 6 KRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp CEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4565554444 44444 789999999999999999998654
No 120
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=35.77 E-value=28 Score=27.17 Aligned_cols=26 Identities=15% Similarity=0.279 Sum_probs=20.2
Q ss_pred cccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 19 QSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 19 ~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
.|-+- ..+|++|+.+|++|+++..+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 45443 457999999999999998764
No 121
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=35.63 E-value=71 Score=20.89 Aligned_cols=33 Identities=12% Similarity=0.194 Sum_probs=21.8
Q ss_pred CCceEEEecCCchh--HHHHHHHh-------CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-------GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-------gIP~v~~~~~~ 155 (199)
.++|+||.|..++. +..+.+++ ++|.+++....
T Consensus 50 ~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 50 ADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 36899999987764 45555443 46777665543
No 122
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=35.54 E-value=69 Score=20.79 Aligned_cols=33 Identities=15% Similarity=0.147 Sum_probs=21.4
Q ss_pred CceEEEecCCchh---HHHHHHHh-----CCCcEEEecchh
Q 046053 124 AVSCIISDDFMAF---TITAAQRL-----GLPSALFFTISA 156 (199)
Q Consensus 124 ~~d~vI~D~~~~~---~~~vA~~l-----gIP~v~~~~~~a 156 (199)
+||+||.|...+. +..+.+++ ++|++++.....
T Consensus 50 ~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 90 (132)
T 2rdm_A 50 AIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHAA 90 (132)
T ss_dssp CCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSCC
T ss_pred CCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCcc
Confidence 6999999986542 34444433 588887765543
No 123
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=35.17 E-value=60 Score=21.55 Aligned_cols=32 Identities=9% Similarity=0.146 Sum_probs=20.4
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
.+||+||.|. .+. +..+.+++ ++|++++....
T Consensus 47 ~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 47 EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 4789999998 653 33344332 57877776554
No 124
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=35.04 E-value=75 Score=20.70 Aligned_cols=33 Identities=15% Similarity=0.061 Sum_probs=20.4
Q ss_pred CCceEEEecCCchh--HHHHHHH-------hCCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQR-------LGLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~-------lgIP~v~~~~~~ 155 (199)
.+||+||.|..++. +.++.++ -++|.+++....
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 87 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYA 87 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCC
Confidence 37999999986553 3333322 157777766543
No 125
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=34.75 E-value=83 Score=20.60 Aligned_cols=38 Identities=8% Similarity=-0.064 Sum_probs=28.0
Q ss_pred EEEcCC--CcccHHHHHHHHHHhhhc-Cc-EEEEEeCCchhh
Q 046053 12 VCIPSP--FQSHIKAMLQSAKLLHHK-GF-HITCVNTEFNHR 49 (199)
Q Consensus 12 v~vp~p--~~GH~~P~l~La~~La~~-G~-~VT~~t~~~~~~ 49 (199)
+++..+ +.......+.+|..+++. |+ +|+++-...-..
T Consensus 6 ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~ 47 (117)
T 1jx7_A 6 IVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVT 47 (117)
T ss_dssp EEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGG
T ss_pred EEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHH
Confidence 344444 234567789999999999 99 999998876554
No 126
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=34.70 E-value=60 Score=21.51 Aligned_cols=32 Identities=9% Similarity=0.034 Sum_probs=19.9
Q ss_pred CCceEEEecCCchh--HHHHHHHh-------CCCcEEEecc
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-------GLPSALFFTI 154 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-------gIP~v~~~~~ 154 (199)
.+||+||.|..++. +..+.+++ ++|.+++...
T Consensus 49 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 89 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSAN 89 (140)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecC
Confidence 47999999986653 44444432 4666655543
No 127
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=34.67 E-value=68 Score=21.66 Aligned_cols=44 Identities=14% Similarity=0.072 Sum_probs=27.2
Q ss_pred HHHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 106 PFLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 106 ~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
...+.++.+.+ .+||+||.|..++. +.++.+++ ++|++++....
T Consensus 54 ~~~~al~~l~~------~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 54 NGQEAIQLLEK------ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFK 104 (150)
T ss_dssp SHHHHHHHHTT------SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred CHHHHHHHhhc------cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 44566666643 47999999986543 44444432 57777665544
No 128
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=34.21 E-value=58 Score=21.68 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=21.7
Q ss_pred CCceEEEecCCchh--HHHHHHHh----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l----gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +..+.+++ .+|.+++....
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 36899999986653 45555444 57777665544
No 129
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=34.07 E-value=60 Score=23.43 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=21.9
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +.++.+++ ++|++++....
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 86 (208)
T 1yio_A 47 EQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHG 86 (208)
T ss_dssp TSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESCT
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 47999999987653 44554443 57887776543
No 130
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=33.97 E-value=41 Score=24.04 Aligned_cols=43 Identities=7% Similarity=-0.058 Sum_probs=25.9
Q ss_pred HHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 107 FLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 107 ~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
..+.++.+.+ .+||+||.|..++. +.++.+++ ++|.+++....
T Consensus 40 ~~~al~~~~~------~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 40 KDEALKLAGA------EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHHHHHHTT------SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHHHhh------CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3445555543 47999999987664 34444332 57776665543
No 131
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=33.85 E-value=58 Score=20.70 Aligned_cols=33 Identities=15% Similarity=0.174 Sum_probs=21.7
Q ss_pred CceEEEecCCchh--HHHHHHH----hCCCcEEEecchh
Q 046053 124 AVSCIISDDFMAF--TITAAQR----LGLPSALFFTISA 156 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~----lgIP~v~~~~~~a 156 (199)
+||+||.|..++. +..+.++ -++|.+++.....
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 45 QPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 6899999986652 3444433 3688777766543
No 132
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=33.67 E-value=65 Score=20.98 Aligned_cols=43 Identities=16% Similarity=0.118 Sum_probs=24.2
Q ss_pred HHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 107 FLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 107 ~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
..+.++.+.+ .+||+||.|...+. +..+.+++ ++|.+++....
T Consensus 40 ~~~a~~~l~~------~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 40 GVDALELLGG------FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHHHHHHTT------CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHHHHHHhc------CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 3455555543 47999999986553 23333332 57877765544
No 133
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=33.58 E-value=43 Score=22.32 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=21.3
Q ss_pred CCceEEEecCCchh----HHHHHHHh-----CCCcEEEecchh
Q 046053 123 PAVSCIISDDFMAF----TITAAQRL-----GLPSALFFTISA 156 (199)
Q Consensus 123 ~~~d~vI~D~~~~~----~~~vA~~l-----gIP~v~~~~~~a 156 (199)
.+||+||.|..++. +.++.+++ ++|++++....-
T Consensus 49 ~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 91 (136)
T 3kto_A 49 DDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSSD 91 (136)
T ss_dssp TTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCC
T ss_pred cCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCCC
Confidence 47899999986644 34444433 577776655443
No 134
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=33.38 E-value=61 Score=21.73 Aligned_cols=32 Identities=9% Similarity=0.078 Sum_probs=19.9
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecc
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTI 154 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~ 154 (199)
.+||+||.|..++. +.++.+++ ++|.+++...
T Consensus 48 ~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~ 86 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGY 86 (141)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCC
Confidence 46899999986653 44444433 4666665443
No 135
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=33.33 E-value=55 Score=22.85 Aligned_cols=35 Identities=14% Similarity=0.075 Sum_probs=25.9
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
...+|+++- .|.+- ..+++.|..+|++|+++....
T Consensus 18 ~~~~v~IiG---~G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFG---CGRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 357888884 46554 447889999999999987653
No 136
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=33.00 E-value=61 Score=23.39 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=28.0
Q ss_pred CCCcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 16 SPFQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 16 ~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
-.|.|=..-...||..|+++|.+|.++-....
T Consensus 10 kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 10 KGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 47788999999999999999999999987643
No 137
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=32.61 E-value=73 Score=21.80 Aligned_cols=38 Identities=18% Similarity=-0.004 Sum_probs=28.1
Q ss_pred EEEcCCCcc--cHHHHHHHHHHhhhcCcEE-EEEeCCchhh
Q 046053 12 VCIPSPFQS--HIKAMLQSAKLLHHKGFHI-TCVNTEFNHR 49 (199)
Q Consensus 12 v~vp~p~~G--H~~P~l~La~~La~~G~~V-T~~t~~~~~~ 49 (199)
+++..+-.| .....+.+|+.+++.||+| +++-...-..
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~ 45 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVN 45 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHH
Confidence 444555554 4567899999999999999 9887766553
No 138
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=32.48 E-value=51 Score=21.81 Aligned_cols=32 Identities=13% Similarity=0.094 Sum_probs=20.6
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
+||+||.|..++. +.++.+++ ++|.+++....
T Consensus 49 ~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 49 NPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
Confidence 6899999987653 44444433 46777665543
No 139
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=32.42 E-value=52 Score=21.30 Aligned_cols=32 Identities=9% Similarity=0.098 Sum_probs=20.8
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
+||+||.|..++. +.++.+++ ++|.+++....
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 47 RPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 6899999986653 44444433 57777665543
No 140
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=32.30 E-value=33 Score=28.02 Aligned_cols=25 Identities=8% Similarity=0.163 Sum_probs=22.1
Q ss_pred HHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 22 IKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 22 ~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
.-+|.+|.+.|.++|++|.+++...
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas~ 169 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAAH 169 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3579999999999999999998764
No 141
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=32.21 E-value=60 Score=24.85 Aligned_cols=34 Identities=9% Similarity=0.043 Sum_probs=25.0
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
.++|++.- + |.+- .+|+++|.++|++|+.++-..
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcCh
Confidence 45666553 5 7665 367999999999999987654
No 142
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=32.21 E-value=99 Score=19.71 Aligned_cols=34 Identities=12% Similarity=0.063 Sum_probs=21.5
Q ss_pred CCceEEEecCCchh--HHHHHHHh----CCCcEEEecchh
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL----GLPSALFFTISA 156 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l----gIP~v~~~~~~a 156 (199)
.+||+||.|..++. +..+.+++ ++|.+++.....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 85 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDN 85 (123)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCC
Confidence 36899999986653 44444443 577776655443
No 143
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=31.99 E-value=71 Score=27.32 Aligned_cols=41 Identities=7% Similarity=0.155 Sum_probs=34.9
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchh
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNH 48 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~ 48 (199)
+..|+++-.+|.|=..-...||..|+.+|.+|.++..+...
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 34566667789999999999999999999999999987654
No 144
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=31.88 E-value=73 Score=24.21 Aligned_cols=47 Identities=13% Similarity=0.240 Sum_probs=30.8
Q ss_pred HHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEecc
Q 046053 106 PFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFTI 154 (199)
Q Consensus 106 ~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~ 154 (199)
.++.+++.+.+..-+ ..+.+||++.--..+...|+++|||++.+.+.
T Consensus 13 nl~ali~~~~~~~~~--~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~ 59 (212)
T 1jkx_A 13 NLQAIIDACKTNKIK--GTVRAVFSNKADAFGLERARQAGIATHTLIAS 59 (212)
T ss_dssp HHHHHHHHHHTTSSS--SEEEEEEESCTTCHHHHHHHHTTCEEEECCGG
T ss_pred HHHHHHHHHHcCCCC--ceEEEEEeCCCchHHHHHHHHcCCcEEEeCcc
Confidence 355666555431000 24788999965555788999999999986543
No 145
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=31.74 E-value=86 Score=19.91 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=21.4
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecchh
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTISA 156 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~a 156 (199)
.+||++|.|..++. +..+.+++ ++|++++.....
T Consensus 43 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 83 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARES 83 (121)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCC
Confidence 36899999986653 34444332 577777655443
No 146
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=31.67 E-value=62 Score=23.85 Aligned_cols=32 Identities=6% Similarity=-0.057 Sum_probs=27.1
Q ss_pred EEEEcC-CCcccHHHHHHHHHHhhhcCcEEEEE
Q 046053 11 AVCIPS-PFQSHIKAMLQSAKLLHHKGFHITCV 42 (199)
Q Consensus 11 vv~vp~-p~~GH~~P~l~La~~La~~G~~VT~~ 42 (199)
|++... ++.|=..-...||..|+++|.+|-++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 444443 78899999999999999999999986
No 147
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=31.58 E-value=57 Score=22.17 Aligned_cols=33 Identities=18% Similarity=0.121 Sum_probs=20.5
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +..+.+++ ++|++++....
T Consensus 57 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 57 REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 47999999986653 34444332 57766655443
No 148
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=31.53 E-value=1e+02 Score=22.83 Aligned_cols=34 Identities=18% Similarity=0.301 Sum_probs=25.1
Q ss_pred EEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeC
Q 046053 11 AVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 11 vv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~ 44 (199)
|+++..+...+-.....+++++.++|++|.++..
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 4555555555667788889999999988888765
No 149
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=31.25 E-value=73 Score=27.15 Aligned_cols=40 Identities=8% Similarity=0.041 Sum_probs=30.5
Q ss_pred CCcceEEEEcCCCccc--HHHHHHHHHH--hhhcCcEEEEEeCC
Q 046053 6 HYKVHAVCIPSPFQSH--IKAMLQSAKL--LHHKGFHITCVNTE 45 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH--~~P~l~La~~--La~~G~~VT~~t~~ 45 (199)
..+++|+++.....+| -.-+..|++. |.++||+|++++..
T Consensus 203 ~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 203 KGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 4568899987655444 4567889999 67789999999864
No 150
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=31.24 E-value=92 Score=20.05 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=20.5
Q ss_pred CCceEEEecCCchh--HHHHHHHh-------CCCcEEEecc
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-------GLPSALFFTI 154 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-------gIP~v~~~~~ 154 (199)
.+||+||.|..++. +..+.+++ ++|.+++...
T Consensus 48 ~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 48 GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 47999999987653 45555543 3566665544
No 151
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=30.75 E-value=68 Score=20.78 Aligned_cols=22 Identities=23% Similarity=0.086 Sum_probs=15.6
Q ss_pred CCceEEEecCCchh--HHHHHHHh
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL 144 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l 144 (199)
.+||+||.|..++. +.++.+++
T Consensus 50 ~~~dlvl~D~~l~~~~g~~~~~~l 73 (129)
T 1p6q_A 50 NPHHLVISDFNMPKMDGLGLLQAV 73 (129)
T ss_dssp SCCSEEEECSSSCSSCHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHH
Confidence 46899999987653 55566554
No 152
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=30.69 E-value=54 Score=26.06 Aligned_cols=48 Identities=17% Similarity=-0.006 Sum_probs=29.0
Q ss_pred CCCCCCCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhh
Q 046053 1 MAISLHYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRC 50 (199)
Q Consensus 1 ~~~~~~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~ 50 (199)
|+..+.+++||++..==|. |--=+..|++.|.+ +++|+++.+...+..
T Consensus 4 ~~~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 4 MKKTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp -------CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred hhhccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 3444556689888774333 22236677888877 889999998877653
No 153
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=30.65 E-value=72 Score=20.40 Aligned_cols=33 Identities=18% Similarity=0.072 Sum_probs=21.3
Q ss_pred CCceEEEecCCchh--HHHHHHHh----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l----gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +..+.+++ ++|.+++....
T Consensus 45 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 45 QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 36899999986653 45555544 46766665544
No 154
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=30.62 E-value=52 Score=25.15 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=31.5
Q ss_pred cceEEEEc--CCCcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 8 KVHAVCIP--SPFQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 8 ~~hvv~vp--~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
+++++.|. -+|.|=..-...||..|+++|.+|.++=....
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 34455553 46778899999999999999999999876653
No 155
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=30.60 E-value=29 Score=29.06 Aligned_cols=34 Identities=12% Similarity=0.116 Sum_probs=23.6
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
++.+|++|-..-.| +.+|..|+++|++|+++--.
T Consensus 21 m~~~ViIVGaGpaG-----l~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 21 MKKRIGIVGAGTAG-----LHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp --CEEEEECCHHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEECCcHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 34567777543333 56788999999999999643
No 156
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=30.48 E-value=94 Score=23.59 Aligned_cols=46 Identities=9% Similarity=0.167 Sum_probs=32.0
Q ss_pred HHHHHHHHH-hhccCCCCCCCceEEEecCCch---------hHHHHHHHhCCCcEEEecchhH
Q 046053 105 QPFLDLLAK-LSDSSNNVNPAVSCIISDDFMA---------FTITAAQRLGLPSALFFTISAC 157 (199)
Q Consensus 105 ~~~~~ll~~-l~~~~~~~~~~~d~vI~D~~~~---------~~~~vA~~lgIP~v~~~~~~a~ 157 (199)
+.+.+.+++ +. .++|++|+|...+ ...++|+.++.|++........
T Consensus 97 ~~i~~~~~~~l~-------~~~D~vlIEgaggl~~p~~~~~~~adla~~l~~pviLV~~~~~~ 152 (228)
T 3of5_A 97 ENLKQFIEDKYN-------QDLDILFIEGAGGLLTPYSDHTTQLDLIKALQIPVLLVSAIKVG 152 (228)
T ss_dssp HHHHHHHHGGGG-------SSCSEEEEEEEEETTCBSSSSCBHHHHHHHHTCCEEEEEECSTT
T ss_pred HHHHHHHHHHHH-------ccCCEEEEECCCccccccccchhHHHHHHHcCCCEEEEEcCCcc
Confidence 345555555 53 3689999996332 2588999999999887766543
No 157
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=30.48 E-value=73 Score=20.94 Aligned_cols=33 Identities=3% Similarity=-0.048 Sum_probs=20.5
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +..+.+++ ++|.+++....
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 46 EFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp SCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC
T ss_pred CCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc
Confidence 36899999986652 34444332 46776665543
No 158
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=30.39 E-value=84 Score=22.00 Aligned_cols=40 Identities=5% Similarity=-0.192 Sum_probs=29.7
Q ss_pred eEEEEcCCCcccH--HHHHHHHHHhhhcCcEEEEEeCCchhh
Q 046053 10 HAVCIPSPFQSHI--KAMLQSAKLLHHKGFHITCVNTEFNHR 49 (199)
Q Consensus 10 hvv~vp~p~~GH~--~P~l~La~~La~~G~~VT~~t~~~~~~ 49 (199)
-++++.-+-.|+. .-.++++..++..|++|+++-...-.-
T Consensus 8 ~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~ 49 (136)
T 2hy5_B 8 FMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVY 49 (136)
T ss_dssp EEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGG
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHH
Confidence 4555666667764 446888999999999999988766543
No 159
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=30.36 E-value=1e+02 Score=20.73 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=20.5
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
.+||+||.|...+. +..+.+++ ++|++++....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 36899999986542 33333332 57877766544
No 160
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=30.31 E-value=68 Score=22.68 Aligned_cols=38 Identities=18% Similarity=0.190 Sum_probs=27.8
Q ss_pred EEEEcCCCcccHHH--HHHHHHHhhhcCcEE-EEEeCCchh
Q 046053 11 AVCIPSPFQSHIKA--MLQSAKLLHHKGFHI-TCVNTEFNH 48 (199)
Q Consensus 11 vv~vp~p~~GH~~P--~l~La~~La~~G~~V-T~~t~~~~~ 48 (199)
++++..|-.|+-.. .+++|+.+++.||+| +++-.....
T Consensus 16 ~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV 56 (140)
T 2d1p_A 16 AIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGV 56 (140)
T ss_dssp EEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHH
Confidence 44555666676544 688999999999999 888766544
No 161
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=30.25 E-value=76 Score=21.00 Aligned_cols=33 Identities=15% Similarity=0.068 Sum_probs=20.3
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +.++.+++ ++|.+++....
T Consensus 43 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (139)
T 2jk1_A 43 EWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYT 82 (139)
T ss_dssp SCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 36999999987653 44444433 46666654443
No 162
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=30.19 E-value=83 Score=23.88 Aligned_cols=31 Identities=16% Similarity=0.296 Sum_probs=24.3
Q ss_pred CceEEEecCCchhHHHHHHHhCCCcEEEecc
Q 046053 124 AVSCIISDDFMAFTITAAQRLGLPSALFFTI 154 (199)
Q Consensus 124 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~ 154 (199)
.+.+||++.--..+...|+++|||++.+.+.
T Consensus 30 ~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~ 60 (216)
T 2ywr_A 30 SIELVISDNPKAYAIERCKKHNVECKVIQRK 60 (216)
T ss_dssp EEEEEEESCTTCHHHHHHHHHTCCEEECCGG
T ss_pred eEEEEEeCCCChHHHHHHHHcCCCEEEeCcc
Confidence 4678999864455788999999999886654
No 163
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=30.15 E-value=72 Score=22.49 Aligned_cols=42 Identities=10% Similarity=0.036 Sum_probs=31.5
Q ss_pred EEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhhh
Q 046053 12 VCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFLK 53 (199)
Q Consensus 12 v~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~~ 53 (199)
+++.....=.+.+.+.+|...++.|++|+++.+..-...+.+
T Consensus 12 II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 12 IIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 334444467778899999999999999999999776654433
No 164
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=29.88 E-value=79 Score=23.95 Aligned_cols=33 Identities=21% Similarity=0.106 Sum_probs=22.7
Q ss_pred CCceEEEecCCchh--HHHHHHHh----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l----gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +.++.+++ ++|++++....
T Consensus 80 ~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 80 DHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp SCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 47999999997764 45555544 57877766544
No 165
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=29.75 E-value=1.6e+02 Score=21.41 Aligned_cols=47 Identities=11% Similarity=0.026 Sum_probs=32.4
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCch---------hHHHHHHHhCCCcEEEecchhHH
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMA---------FTITAAQRLGLPSALFFTISACS 158 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~---------~~~~vA~~lgIP~v~~~~~~a~~ 158 (199)
..+++.++++.+ .+|.||.|.--+ ...++++.++.|.+.........
T Consensus 96 ~~l~~~l~~l~~-------~yD~viID~p~~l~~p~~~~~~~~~l~~~~~~~vi~v~~~~~~~ 151 (224)
T 1byi_A 96 LVMSAGLRALEQ-------QADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGC 151 (224)
T ss_dssp HHHHHHHHHHHT-------TCSEEEEECSSSTTCEEETTEEHHHHHHHHTCCEEEEEECSTTH
T ss_pred HHHHHHHHHHHH-------hCCEEEEEcCCccccCCCcchhHHHHHHHhCCCEEEEecCCCCc
Confidence 456666677643 699999997521 24788888998877766555433
No 166
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=29.67 E-value=42 Score=26.97 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=25.9
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
..++|.|+-....| ..+|+.|++.||+|+++.-.
T Consensus 13 ~~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 57888888655555 45689999999999998764
No 167
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=29.49 E-value=56 Score=21.02 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=18.8
Q ss_pred CceEEEecCCchh--HHHHHHHh-------CCCcEEEec
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-------GLPSALFFT 153 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-------gIP~v~~~~ 153 (199)
+||+||.|..++. +..+.+++ ++|.+++..
T Consensus 45 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 83 (124)
T 1mb3_A 45 KPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTA 83 (124)
T ss_dssp CCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC-
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEEC
Confidence 6899999987653 44444433 466666544
No 168
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=29.25 E-value=35 Score=24.92 Aligned_cols=21 Identities=10% Similarity=0.167 Sum_probs=17.7
Q ss_pred HHHHHHhhhcCcEEEEEeCCc
Q 046053 26 LQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 26 l~La~~La~~G~~VT~~t~~~ 46 (199)
..|+++|+++|++|+.+.-..
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 14 SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp HHHHHHHHHTTCEEEEEESCS
T ss_pred HHHHHHHHhCCCEEEEEEcCc
Confidence 478999999999999987653
No 169
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=29.19 E-value=46 Score=28.02 Aligned_cols=28 Identities=7% Similarity=0.106 Sum_probs=22.4
Q ss_pred cccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 19 QSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 19 ~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
.||+.|++.+ ++|.+.||++.++.....
T Consensus 80 lGhlv~l~~l-~~lQ~~G~~~~~lIgD~h 107 (392)
T 1y42_X 80 VGHLLPLMPL-FWMYLEGYKAFTLIGGST 107 (392)
T ss_dssp GGGHHHHHHH-HHHHHHTCEEEEEECTTT
T ss_pred HHHHHHHHHH-HHHHHcCCcEEEEEcCce
Confidence 4999987766 588888999999986643
No 170
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=29.14 E-value=69 Score=25.86 Aligned_cols=30 Identities=7% Similarity=0.069 Sum_probs=21.1
Q ss_pred CceEEEecCCch-hHHHHHHHhCCCcEEEec
Q 046053 124 AVSCIISDDFMA-FTITAAQRLGLPSALFFT 153 (199)
Q Consensus 124 ~~d~vI~D~~~~-~~~~vA~~lgIP~v~~~~ 153 (199)
+||+||...... -...+.+++|||++.+..
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 689999865422 234456788999998854
No 171
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=29.09 E-value=42 Score=26.14 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=23.8
Q ss_pred Cce-EEEecCCch-hHHHHHHHhCCCcEEEecch
Q 046053 124 AVS-CIISDDFMA-FTITAAQRLGLPSALFFTIS 155 (199)
Q Consensus 124 ~~d-~vI~D~~~~-~~~~vA~~lgIP~v~~~~~~ 155 (199)
.|| ++|.|...- -+..-|.++|||.+.+.-+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCC
Confidence 477 556787444 47888999999999987553
No 172
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=28.75 E-value=46 Score=26.45 Aligned_cols=45 Identities=11% Similarity=0.104 Sum_probs=38.0
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHH--------hhhc-CcEEEEEeCCchhhhh
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKL--------LHHK-GFHITCVNTEFNHRCF 51 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~--------La~~-G~~VT~~t~~~~~~~~ 51 (199)
.+.+|++.+.++-+|-....-++.. |.++ |++|+++...-..+.+
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~i 172 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDF 172 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHH
Confidence 4678999999999999999888877 9999 9999998886555444
No 173
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=28.55 E-value=81 Score=21.34 Aligned_cols=34 Identities=21% Similarity=0.167 Sum_probs=21.3
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecchh
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTISA 156 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~a 156 (199)
.+||+||.|...+. +..+.+++ ++|++++....-
T Consensus 46 ~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (155)
T 1qkk_A 46 DFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGD 86 (155)
T ss_dssp TCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGG
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 47899999976542 33344332 688887765443
No 174
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=28.42 E-value=76 Score=24.45 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=25.8
Q ss_pred CCCCCCCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 1 MAISLHYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 1 ~~~~~~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
|.+....+-++++|+-.+.| + -..++++|+++|++|.++.-.
T Consensus 1 M~~~~~l~~k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 42 (270)
T 1yde_A 1 MATGTRYAGKVVVVTGGGRG-I--GAGIVRAFVNSGARVVICDKD 42 (270)
T ss_dssp ---CCTTTTCEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCCCCCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 43333333456677765542 2 357899999999999887643
No 175
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=28.17 E-value=95 Score=22.63 Aligned_cols=38 Identities=8% Similarity=-0.021 Sum_probs=32.2
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
+.+.++-+++.|=..=+..|+++|..+|.+|.++....
T Consensus 5 ~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 45667777899999999999999999999999888654
No 176
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=28.17 E-value=59 Score=27.64 Aligned_cols=28 Identities=11% Similarity=0.209 Sum_probs=22.3
Q ss_pred cccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 19 QSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 19 ~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
.||+.|++.+ ++|.+.||++.++.....
T Consensus 46 lGh~v~l~~l-~~lQ~~G~~~i~lIgd~t 73 (419)
T 2ts1_A 46 IGHLATILTM-RRFQQAGHRPIALVGGAT 73 (419)
T ss_dssp GGGHHHHHHH-HHHHHTTCEEEEEECTTG
T ss_pred HHHHHHHHHH-HHHHHCCCcEEEEEcCce
Confidence 4999986665 688999999999876543
No 177
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=28.01 E-value=1e+02 Score=25.07 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=32.7
Q ss_pred ceEEEEcC-CCcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 9 VHAVCIPS-PFQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 9 ~hvv~vp~-p~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
..|+++.. +|.|=..-...||..||++|.+|-++.+...
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 44555544 8889999999999999999999999999873
No 178
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=27.94 E-value=38 Score=25.34 Aligned_cols=21 Identities=14% Similarity=0.004 Sum_probs=17.5
Q ss_pred HHHHHHhhhcCcEEEEEeCCc
Q 046053 26 LQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 26 l~La~~La~~G~~VT~~t~~~ 46 (199)
..|+++|+++|++|+++.-..
T Consensus 35 ~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 35 RYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp HHHHHHHHHTTCEEEEEESSG
T ss_pred HHHHHHHHhCCCeEEEEECCh
Confidence 467999999999999987653
No 179
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=27.80 E-value=77 Score=24.42 Aligned_cols=32 Identities=25% Similarity=0.328 Sum_probs=24.3
Q ss_pred CceEEEecCCchhHHHHHHHhCCCcEEEecch
Q 046053 124 AVSCIISDDFMAFTITAAQRLGLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~ 155 (199)
.+.+||++---..+...|+++|||++.+.+..
T Consensus 51 ~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~ 82 (229)
T 3auf_A 51 RVAVVISDRADAYGLERARRAGVDALHMDPAA 82 (229)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCEEEECCGGG
T ss_pred eEEEEEcCCCchHHHHHHHHcCCCEEEECccc
Confidence 46789998544456789999999998766543
No 180
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=27.77 E-value=69 Score=20.45 Aligned_cols=31 Identities=3% Similarity=-0.015 Sum_probs=20.1
Q ss_pred CceEEEecCCch---hHHHHHHH-------hCCCcEEEecch
Q 046053 124 AVSCIISDDFMA---FTITAAQR-------LGLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~---~~~~vA~~-------lgIP~v~~~~~~ 155 (199)
+||+||.|...+ .+..+.++ -++|++++ ...
T Consensus 49 ~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~-~~~ 89 (127)
T 2gkg_A 49 RPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII-GNP 89 (127)
T ss_dssp CCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE-ECG
T ss_pred CCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE-ecC
Confidence 689999998665 23333332 36888887 443
No 181
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=27.57 E-value=96 Score=23.46 Aligned_cols=32 Identities=25% Similarity=0.263 Sum_probs=24.2
Q ss_pred CceEEEecCCchhHHHHHHHhCCCcEEEecch
Q 046053 124 AVSCIISDDFMAFTITAAQRLGLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~~ 155 (199)
.+.+||++---..+...|+++|||++.+.+..
T Consensus 32 ~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~ 63 (212)
T 3av3_A 32 RVALLVCDRPGAKVIERAARENVPAFVFSPKD 63 (212)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCCEEECCGGG
T ss_pred eEEEEEeCCCCcHHHHHHHHcCCCEEEeCccc
Confidence 56789998534457788999999998766543
No 182
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=27.31 E-value=1.1e+02 Score=20.19 Aligned_cols=21 Identities=24% Similarity=0.221 Sum_probs=14.1
Q ss_pred CCceEEEecCCchh--HHHHHHH
Q 046053 123 PAVSCIISDDFMAF--TITAAQR 143 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~ 143 (199)
.+||+||.|..++. +.++.++
T Consensus 53 ~~~dlvllD~~lp~~~g~~~~~~ 75 (140)
T 3c97_A 53 RQFDVIIMDIQMPVMDGLEAVSE 75 (140)
T ss_dssp SCCSEEEECTTCCSSCHHHHHHH
T ss_pred CCCCEEEEeCCCCCCcHHHHHHH
Confidence 36899999986653 4444443
No 183
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=27.22 E-value=42 Score=26.47 Aligned_cols=34 Identities=9% Similarity=0.069 Sum_probs=26.0
Q ss_pred ceEEEEcCCCcccHHH-HHHHHHHhhhcCcEEEEEeC
Q 046053 9 VHAVCIPSPFQSHIKA-MLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P-~l~La~~La~~G~~VT~~t~ 44 (199)
.+|+++.-+ |+--= -+-+|++|+.+|++|+++..
T Consensus 86 ~~vlVlcG~--GNNGGDGlv~AR~L~~~G~~V~v~~~ 120 (259)
T 3d3k_A 86 PTVALLCGP--HVKGAQGISCGRHLANHDVQVILFLP 120 (259)
T ss_dssp CEEEEEECS--SHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECC--CCCHHHHHHHHHHHHHCCCeEEEEEe
Confidence 478887754 44422 57889999999999999865
No 184
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=27.22 E-value=35 Score=27.88 Aligned_cols=26 Identities=15% Similarity=0.163 Sum_probs=20.5
Q ss_pred ccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 20 SHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 20 GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
|..-- .+|++++.+|.+||+++.+..
T Consensus 65 GkmG~--aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 65 GRRGA--TSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp CHHHH--HHHHHHHHTTCEEEEEEETTS
T ss_pred cHHHH--HHHHHHHHCCCEEEEEecCCC
Confidence 55543 578999999999999987654
No 185
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=27.09 E-value=40 Score=24.74 Aligned_cols=21 Identities=10% Similarity=0.075 Sum_probs=17.7
Q ss_pred HHHHHHhhhcCcEEEEEeCCc
Q 046053 26 LQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 26 l~La~~La~~G~~VT~~t~~~ 46 (199)
..|+++|+++|++|+.+.-..
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 14 SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp HHHHHHHHHTTCEEEEEESCH
T ss_pred HHHHHHHHHCCCEEEEEEecc
Confidence 578999999999999987543
No 186
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=27.04 E-value=84 Score=24.16 Aligned_cols=35 Identities=9% Similarity=0.106 Sum_probs=25.8
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
+-++++|+-.+.| =-..+|++|+++|++|.++.-.
T Consensus 29 ~~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 29 EGASAIVSGGAGG---LGEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TTEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4567778776654 2357899999999999887543
No 187
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=27.02 E-value=52 Score=25.36 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=24.7
Q ss_pred Cce-EEEecCCch-hHHHHHHHhCCCcEEEecch
Q 046053 124 AVS-CIISDDFMA-FTITAAQRLGLPSALFFTIS 155 (199)
Q Consensus 124 ~~d-~vI~D~~~~-~~~~vA~~lgIP~v~~~~~~ 155 (199)
.|| ++|.|...- -+..-|.++|||.+.+.-+.
T Consensus 149 ~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn 182 (218)
T 3r8n_B 149 LPDALFVIDADHEHIAIKEANNLGIPVFAIVDTN 182 (218)
T ss_dssp CCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSS
T ss_pred CCCeEEecCcccccHHHHHHHHhCCCEEEEEeCc
Confidence 467 678897554 46788999999999987554
No 188
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=26.91 E-value=1.2e+02 Score=23.94 Aligned_cols=47 Identities=15% Similarity=0.065 Sum_probs=29.7
Q ss_pred CCCCCCCcceEEEEcCCCcccH-HHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 1 MAISLHYKVHAVCIPSPFQSHI-KAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 1 ~~~~~~~~~hvv~vp~p~~GH~-~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
|.....++..+++-|..+.|.. .-.-++.+.|.++|+++++..|...
T Consensus 3 m~~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~ 50 (304)
T 3s40_A 3 MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ 50 (304)
T ss_dssp --CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST
T ss_pred CccCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc
Confidence 4433344555566666666653 3345677888899999999877543
No 189
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=26.73 E-value=77 Score=23.69 Aligned_cols=39 Identities=8% Similarity=0.085 Sum_probs=28.2
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
...+-|++++.-+. +..-...+++.|+++|++|..+--.
T Consensus 44 ~~~p~vv~~hG~~~-~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 44 ANGRTILLMHGKNF-CAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp CCSCEEEEECCTTC-CGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCCCeEEEEcCCCC-cchHHHHHHHHHHHCCCeEEEeecC
Confidence 34566777776544 3345778999999999999887654
No 190
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=26.71 E-value=81 Score=24.05 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=31.3
Q ss_pred CcceEEEEcC--CCcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 7 YKVHAVCIPS--PFQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 7 ~~~hvv~vp~--p~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
.+.+++.|.. .|.|=..-...||..|+ +|.+|-++-....
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~~ 66 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDTQ 66 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECTT
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 3456666644 67799999999999999 9999999876543
No 191
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=26.70 E-value=40 Score=26.36 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=26.2
Q ss_pred ceEEEEcCCCcccHHH-HHHHHHHhhhcCcEEEEEeCC
Q 046053 9 VHAVCIPSPFQSHIKA-MLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P-~l~La~~La~~G~~VT~~t~~ 45 (199)
.+|+++.-| |+--= -+-.||+|+.+|++|+++...
T Consensus 59 ~~v~VlcG~--GNNGGDGlv~AR~L~~~G~~V~v~~~~ 94 (246)
T 1jzt_A 59 KHVFVIAGP--GNNGGDGLVCARHLKLFGYNPVVFYPK 94 (246)
T ss_dssp CEEEEEECS--SHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CeEEEEECC--CCCHHHHHHHHHHHHHCCCeEEEEEcC
Confidence 478887765 44322 478899999999999998653
No 192
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=26.69 E-value=1.3e+02 Score=21.73 Aligned_cols=33 Identities=12% Similarity=0.233 Sum_probs=21.2
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +.++.+++ ++|++++....
T Consensus 45 ~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 84 (225)
T 1kgs_A 45 EPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALS 84 (225)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 36899999986653 44444333 57887776544
No 193
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.60 E-value=95 Score=20.58 Aligned_cols=32 Identities=9% Similarity=-0.118 Sum_probs=19.6
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
+||+||.|..++. +..+.+++ ++|.+++....
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 48 KPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp CCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 6899999986653 44444443 46666555443
No 194
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=26.58 E-value=1.8e+02 Score=22.48 Aligned_cols=60 Identities=10% Similarity=0.047 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchh----------HHHHHHHhCCCcEEEecchhHHHHHHHhHHHHHHc
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAF----------TITAAQRLGLPSALFFTISACSFKGLKQFQTLKEK 171 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~----------~~~vA~~lgIP~v~~~~~~a~~~~~~~~~~~l~~~ 171 (199)
+.+.+.++++.+ ++|+||+|...++ ..++|+.++.|++.........+.-....-.++++
T Consensus 114 ~~i~~~~~~l~~-------~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~~g~i~~~~lt~~~l~~ 183 (251)
T 3fgn_A 114 DQIVRLIADLDR-------PGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADLGTLNHTKLTLEALAA 183 (251)
T ss_dssp HHHHHHHHTTCC-------TTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-------cCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCCCccHHHHHHHHHHHHh
No 195
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=26.45 E-value=90 Score=23.85 Aligned_cols=28 Identities=14% Similarity=0.004 Sum_probs=22.9
Q ss_pred CceEEEecCCchhHHHHHHHhCCCcEEEe
Q 046053 124 AVSCIISDDFMAFTITAAQRLGLPSALFF 152 (199)
Q Consensus 124 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 152 (199)
.+.+||++-- ..+...|+++|||++.+.
T Consensus 40 eI~~Vis~~~-a~~~~~A~~~gIp~~~~~ 67 (215)
T 3da8_A 40 RVVAVGVDRE-CRAAEIAAEASVPVFTVR 67 (215)
T ss_dssp EEEEEEESSC-CHHHHHHHHTTCCEEECC
T ss_pred eEEEEEeCCc-hHHHHHHHHcCCCEEEeC
Confidence 5789999975 346788999999999884
No 196
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=26.28 E-value=56 Score=27.76 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=22.2
Q ss_pred cccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 19 QSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 19 ~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
.||+.|++.+ ++|.+.||++.++.....
T Consensus 48 lGh~v~l~~~-~~lQ~~G~~~~~lIgd~t 75 (420)
T 1jil_A 48 IGHLLPFLTL-RRFQEHGHRPIVLIGGGT 75 (420)
T ss_dssp HHHHHHHHHH-HHHHHTTCEEEEEECTTG
T ss_pred HHHHHHHHHH-HHHHHCCCcEEEEEcCce
Confidence 3999986665 688999999999886543
No 197
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=26.27 E-value=1.2e+02 Score=19.93 Aligned_cols=32 Identities=16% Similarity=0.023 Sum_probs=20.6
Q ss_pred CCceEEEecCCch---hHHHHHHH----hCCCcEEEecc
Q 046053 123 PAVSCIISDDFMA---FTITAAQR----LGLPSALFFTI 154 (199)
Q Consensus 123 ~~~d~vI~D~~~~---~~~~vA~~----lgIP~v~~~~~ 154 (199)
.+||+||.|..++ .+..+.++ -++|++++...
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~ 87 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAH 87 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESS
T ss_pred CCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECC
Confidence 3799999998663 24444433 36887776553
No 198
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=26.17 E-value=34 Score=27.32 Aligned_cols=18 Identities=11% Similarity=0.205 Sum_probs=15.6
Q ss_pred HHHHHHhhhcCcEEEEEe
Q 046053 26 LQSAKLLHHKGFHITCVN 43 (199)
Q Consensus 26 l~La~~La~~G~~VT~~t 43 (199)
+-+|..|+++|++|+++=
T Consensus 17 l~~A~~La~~G~~V~v~E 34 (397)
T 3oz2_A 17 STAARYAAKYGLKTLMIE 34 (397)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCcEEEEe
Confidence 567899999999999983
No 199
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=25.97 E-value=85 Score=24.65 Aligned_cols=32 Identities=13% Similarity=0.143 Sum_probs=21.9
Q ss_pred CCceEEEecCCch-h--H----HHHHHHhCCCcEEEecc
Q 046053 123 PAVSCIISDDFMA-F--T----ITAAQRLGLPSALFFTI 154 (199)
Q Consensus 123 ~~~d~vI~D~~~~-~--~----~~vA~~lgIP~v~~~~~ 154 (199)
.+||+||.|..++ . + ..+-+..++|.+++...
T Consensus 204 ~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 204 RTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp CCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred CCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 4799999999887 2 2 33333338998876664
No 200
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=25.83 E-value=1.5e+02 Score=19.87 Aligned_cols=34 Identities=12% Similarity=0.031 Sum_probs=21.7
Q ss_pred CCceEEEecCCchh--HHHHHHH-------hCCCcEEEecchh
Q 046053 123 PAVSCIISDDFMAF--TITAAQR-------LGLPSALFFTISA 156 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~-------lgIP~v~~~~~~a 156 (199)
.+||+||.|..++. +.++.++ .++|++++....-
T Consensus 58 ~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~~ 100 (152)
T 3heb_A 58 GRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTDD 100 (152)
T ss_dssp TCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCCC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCCC
Confidence 47999999986653 3444433 2577777665543
No 201
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=25.80 E-value=96 Score=22.67 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=20.4
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEec
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFT 153 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~ 153 (199)
.+||+||.|..++. +.++.+++ ++|++++..
T Consensus 50 ~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~ 87 (233)
T 1ys7_A 50 NRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSA 87 (233)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEc
Confidence 37899999986652 44444333 678877654
No 202
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=25.61 E-value=52 Score=25.43 Aligned_cols=20 Identities=20% Similarity=0.242 Sum_probs=16.8
Q ss_pred HHHHHHhhhcCcEEEEEeCC
Q 046053 26 LQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 26 l~La~~La~~G~~VT~~t~~ 45 (199)
..+|++|+++|.+|+++..+
T Consensus 38 ~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 38 FAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 46789999999999998653
No 203
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=25.57 E-value=75 Score=27.13 Aligned_cols=25 Identities=24% Similarity=0.462 Sum_probs=20.3
Q ss_pred CceEEEecCCchhHHHHHHHhCCCcEEE
Q 046053 124 AVSCIISDDFMAFTITAAQRLGLPSALF 151 (199)
Q Consensus 124 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 151 (199)
+||++|... +...+|+++|||.+.+
T Consensus 375 ~pDllig~~---~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 375 QAQLVIGNS---HALASARRLGVPLLRA 399 (458)
T ss_dssp TCSEEEECT---THHHHHHHTTCCEEEC
T ss_pred CCCEEEECh---hHHHHHHHcCCCEEEe
Confidence 689999874 4677999999999853
No 204
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=25.55 E-value=40 Score=22.99 Aligned_cols=33 Identities=15% Similarity=0.102 Sum_probs=25.2
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
.||+++-+ |.+ -..+++.|.++|++|+++....
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 57777754 554 3578999999999999987654
No 205
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=25.54 E-value=1.2e+02 Score=20.00 Aligned_cols=33 Identities=9% Similarity=0.162 Sum_probs=20.5
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
.+||+||.|..++. +..+.+++ ++|++++....
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHG 87 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCC
Confidence 47999999986553 34444333 57777665543
No 206
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=25.45 E-value=96 Score=24.60 Aligned_cols=37 Identities=19% Similarity=0.288 Sum_probs=29.8
Q ss_pred cceEEEE-cCCCcccHHHHHHHHHHhhhcCcEEEEEeC
Q 046053 8 KVHAVCI-PSPFQSHIKAMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 8 ~~hvv~v-p~p~~GH~~P~l~La~~La~~G~~VT~~t~ 44 (199)
+.+|+++ -.+...|-.=+..++|++.+.|..|+++..
T Consensus 107 ~~rIIlf~ds~~~~~~~~l~~lak~lkk~gI~v~vIgF 144 (268)
T 4b4t_W 107 HQRIVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINF 144 (268)
T ss_dssp EEEEEEEECSCCSSCHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred ceEEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEEe
Confidence 3444444 567888888899999999999999999885
No 207
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=25.33 E-value=46 Score=23.88 Aligned_cols=20 Identities=15% Similarity=0.330 Sum_probs=17.0
Q ss_pred HHHHHHhhhcCcEEEEEeCC
Q 046053 26 LQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 26 l~La~~La~~G~~VT~~t~~ 45 (199)
.+++++|+++|++|+.+.-.
T Consensus 17 ~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 17 LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCeEEEEEeC
Confidence 57899999999999998754
No 208
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=25.24 E-value=89 Score=24.97 Aligned_cols=45 Identities=18% Similarity=0.126 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEec
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFT 153 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 153 (199)
..+++++....+. .-...+.+||+|- ..+..+|+++|||++.+-.
T Consensus 102 ~~l~~ll~~~~~g--~l~~~i~~Visn~--~~~~~~A~~~gIp~~~~~~ 146 (286)
T 3n0v_A 102 HCLNDLLYRQRIG--QLGMDVVAVVSNH--PDLEPLAHWHKIPYYHFAL 146 (286)
T ss_dssp HHHHHHHHHHHTT--SSCCEEEEEEESS--STTHHHHHHTTCCEEECCC
T ss_pred CCHHHHHHHHHCC--CCCcEEEEEEeCc--HHHHHHHHHcCCCEEEeCC
Confidence 5778888765431 0013578999985 2345679999999987643
No 209
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=24.98 E-value=78 Score=21.35 Aligned_cols=44 Identities=11% Similarity=-0.096 Sum_probs=25.2
Q ss_pred HHHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 106 PFLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 106 ~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
...+.++.+.+ .+||+||.|..++. +..+.+++ ++|++++....
T Consensus 49 ~~~~a~~~l~~------~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 99 (152)
T 3eul_A 49 DGAAALELIKA------HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHD 99 (152)
T ss_dssp SHHHHHHHHHH------HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred CHHHHHHHHHh------cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccC
Confidence 34445555443 36899999986543 34444433 46766655443
No 210
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=24.96 E-value=47 Score=26.88 Aligned_cols=35 Identities=9% Similarity=0.075 Sum_probs=26.5
Q ss_pred ceEEEEcCCCcccHHH-HHHHHHHhhhcCcEEEEEeCC
Q 046053 9 VHAVCIPSPFQSHIKA-MLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P-~l~La~~La~~G~~VT~~t~~ 45 (199)
.+|+++.-| |+--= -+-+|++|+.+|++|+++...
T Consensus 133 ~~vlVlcG~--GNNGGDGlv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGP--HVKGAQGISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECS--SHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECC--CCCHHHHHHHHHHHHHCCCcEEEEEec
Confidence 578887754 44422 478899999999999998653
No 211
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=24.92 E-value=68 Score=20.60 Aligned_cols=34 Identities=15% Similarity=0.302 Sum_probs=23.4
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcC-cEEEEEeCCc
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKG-FHITCVNTEF 46 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G-~~VT~~t~~~ 46 (199)
..+|+++-. |-+- ..+++.|.++| ++|+++.-..
T Consensus 5 ~~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCCH
Confidence 456777643 4443 45788999999 9998876543
No 212
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=24.92 E-value=1e+02 Score=25.09 Aligned_cols=40 Identities=10% Similarity=-0.018 Sum_probs=33.4
Q ss_pred ceEEEEcC-CCcccHHHHHHHHHHhhhcCcEEEEEeCCchh
Q 046053 9 VHAVCIPS-PFQSHIKAMLQSAKLLHHKGFHITCVNTEFNH 48 (199)
Q Consensus 9 ~hvv~vp~-p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~ 48 (199)
.+|+++.. +|.|=..-...||..|+++|.+|-++.+....
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~ 56 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAH 56 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSC
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCC
Confidence 45555554 88899999999999999999999999998543
No 213
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=24.87 E-value=78 Score=23.10 Aligned_cols=32 Identities=16% Similarity=0.048 Sum_probs=21.6
Q ss_pred CceEEEecCCchh--HHHHHHH---------hCCCcEEEecch
Q 046053 124 AVSCIISDDFMAF--TITAAQR---------LGLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~---------lgIP~v~~~~~~ 155 (199)
+||+||.|..++. +.+++++ .++|++++....
T Consensus 119 ~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~ 161 (206)
T 3mm4_A 119 PFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHD 161 (206)
T ss_dssp SCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCC
Confidence 7999999987663 4444433 357887776654
No 214
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=24.76 E-value=65 Score=21.34 Aligned_cols=31 Identities=16% Similarity=0.135 Sum_probs=17.9
Q ss_pred CceEEEecCCchh--HHHHHHH-------hCCCcEEEecc
Q 046053 124 AVSCIISDDFMAF--TITAAQR-------LGLPSALFFTI 154 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~-------lgIP~v~~~~~ 154 (199)
+||+||.|..++. +..+.++ -++|++++...
T Consensus 46 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 46 HPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp CCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 6899999986653 2333322 35777766554
No 215
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=24.75 E-value=84 Score=25.22 Aligned_cols=45 Identities=22% Similarity=0.228 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEec
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFFT 153 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~ 153 (199)
..+++++...... .-...+.+||+|- ..+..+|+++|||++.+-.
T Consensus 107 ~~l~~ll~~~~~g--~l~~~i~~Visn~--~~~~~~A~~~gIp~~~~~~ 151 (292)
T 3lou_A 107 HCLADLLFRWKMG--ELKMDIVGIVSNH--PDFAPLAAQHGLPFRHFPI 151 (292)
T ss_dssp HHHHHHHHHHHHT--SSCCEEEEEEESS--STTHHHHHHTTCCEEECCC
T ss_pred cCHHHHHHHHHcC--CCCcEEEEEEeCc--HHHHHHHHHcCCCEEEeCC
Confidence 5778888765431 0013578999985 2345679999999987643
No 216
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=24.75 E-value=1e+02 Score=22.77 Aligned_cols=31 Identities=10% Similarity=0.111 Sum_probs=27.5
Q ss_pred CCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 16 SPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 16 ~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
-++.|=..-...||..|+++|.+|.++-...
T Consensus 11 kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 11 KGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 3678999999999999999999999998764
No 217
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=24.66 E-value=88 Score=21.06 Aligned_cols=32 Identities=13% Similarity=0.086 Sum_probs=20.8
Q ss_pred CceEEEecCCchh--HHHHHHHh-------CCCcEEEecch
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-------GLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-------gIP~v~~~~~~ 155 (199)
+||+||.|..++. +.++.+++ ++|.+++....
T Consensus 61 ~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~ 101 (149)
T 1i3c_A 61 RPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSH 101 (149)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCC
Confidence 6899999987653 44444433 46777766544
No 218
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=24.66 E-value=93 Score=25.43 Aligned_cols=39 Identities=15% Similarity=0.003 Sum_probs=32.2
Q ss_pred CcceEEEEc--CCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 7 YKVHAVCIP--SPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 7 ~~~hvv~vp--~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
.+++++.|. -.|.|=..-...||..|+++|.+|-++-..
T Consensus 141 ~~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 141 DKSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TSCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 345555554 478899999999999999999999999866
No 219
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=24.60 E-value=1.1e+02 Score=19.01 Aligned_cols=33 Identities=15% Similarity=-0.027 Sum_probs=20.9
Q ss_pred CceEEEecCCchh--HHHHHHH-------hCCCcEEEecchh
Q 046053 124 AVSCIISDDFMAF--TITAAQR-------LGLPSALFFTISA 156 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~-------lgIP~v~~~~~~a 156 (199)
+||+||.|..... +..+.++ -++|++++....-
T Consensus 45 ~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~~ 86 (119)
T 2j48_A 45 QPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEPP 86 (119)
T ss_dssp CCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCCC
Confidence 6899999986542 3333322 3688887766543
No 220
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=24.54 E-value=81 Score=23.69 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=21.6
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
+||+||.|..++. +.++.+++ ++|.+++....
T Consensus 67 ~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 67 RPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 6999999987663 45555443 57877766544
No 221
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=24.51 E-value=84 Score=25.06 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchh--HHHHHHHhCCCcE--EEe
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAF--TITAAQRLGLPSA--LFF 152 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~--~~~vA~~lgIP~v--~~~ 152 (199)
..+.++++.+++ .++.||+++....- +..+|++.|++.+ .+.
T Consensus 219 ~~l~~l~~~ik~------~~v~~if~e~~~~~~~~~~ia~~~g~~v~~~~~~ 264 (294)
T 3hh8_A 219 DQISSLIEKLKV------IKPSALFVESSVDRRPMETVSKDSGIPIYSEIFT 264 (294)
T ss_dssp HHHHHHHHHHHH------SCCSCEEEETTSCSHHHHHHHHHHCCCEEEEECS
T ss_pred HHHHHHHHHHHH------cCCCEEEEeCCCCcHHHHHHHHHhCCcEEeeecC
Confidence 456667666665 47889999986664 6889999999998 554
No 222
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=24.48 E-value=42 Score=26.34 Aligned_cols=34 Identities=6% Similarity=0.055 Sum_probs=24.5
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhc-----C-cEEEEEeC
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHK-----G-FHITCVNT 44 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~-----G-~~VT~~t~ 44 (199)
+++++|.++-....| ..+|+.|++. | |+|+++.-
T Consensus 6 ~~~m~I~iiG~G~mG-----~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVG-----GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp -CCEEEEEECCSHHH-----HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHhCccccCCCCCEEEEEc
Confidence 345688888544444 3558889888 9 99999976
No 223
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=24.46 E-value=84 Score=21.46 Aligned_cols=32 Identities=9% Similarity=0.082 Sum_probs=20.5
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
+||+||.|..++. +..+.+++ ++|++++....
T Consensus 83 ~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 121 (157)
T 3hzh_A 83 NIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALG 121 (157)
T ss_dssp GCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred CCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccC
Confidence 6899999986553 34444333 57877665543
No 224
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=24.38 E-value=67 Score=25.73 Aligned_cols=31 Identities=10% Similarity=0.069 Sum_probs=21.2
Q ss_pred CceEEEecCCchhHHHHHHHhCCCcEEEecc
Q 046053 124 AVSCIISDDFMAFTITAAQRLGLPSALFFTI 154 (199)
Q Consensus 124 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~~~~ 154 (199)
+||+||.........+--++.|||++.+...
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 7899998754333333446779999998654
No 225
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=24.37 E-value=84 Score=19.91 Aligned_cols=33 Identities=21% Similarity=0.115 Sum_probs=21.3
Q ss_pred CceEEEecCCchh--HHHHHHHh----CCCcEEEecchh
Q 046053 124 AVSCIISDDFMAF--TITAAQRL----GLPSALFFTISA 156 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l----gIP~v~~~~~~a 156 (199)
+||+||.|..++. +..+.+++ .+|.+++....-
T Consensus 45 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (121)
T 1zh2_A 45 KPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSE 83 (121)
T ss_dssp CCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCS
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECCCC
Confidence 6899999986653 45555444 477776655443
No 226
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=24.27 E-value=29 Score=27.37 Aligned_cols=33 Identities=6% Similarity=-0.097 Sum_probs=23.7
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeC
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~ 44 (199)
...+|+++=....| +.+|..|+++|++|+++-.
T Consensus 7 ~~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAA-----HTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEec
Confidence 34567777544334 5678888899999999865
No 227
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=24.17 E-value=51 Score=26.14 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=26.3
Q ss_pred ceEEEEcCCCcccHHH-HHHHHHHhhhcCcEEEEEeCC
Q 046053 9 VHAVCIPSPFQSHIKA-MLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P-~l~La~~La~~G~~VT~~t~~ 45 (199)
.+|+++.-| |+--= -+-+||+|+.+|++|+++...
T Consensus 80 ~~VlVlcG~--GNNGGDGlv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGP--GNNGGDGLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECS--SHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECC--CCCHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 478887765 44322 578899999999999998653
No 228
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=23.98 E-value=74 Score=24.35 Aligned_cols=31 Identities=13% Similarity=0.300 Sum_probs=23.6
Q ss_pred Cce-EEEecCCch-hHHHHHHHhCCCcEEEecc
Q 046053 124 AVS-CIISDDFMA-FTITAAQRLGLPSALFFTI 154 (199)
Q Consensus 124 ~~d-~vI~D~~~~-~~~~vA~~lgIP~v~~~~~ 154 (199)
.|| ++|.|...- -+..-|.++|||.+.++-+
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCC
Confidence 356 666887544 4788899999999998754
No 229
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=23.73 E-value=97 Score=25.20 Aligned_cols=32 Identities=16% Similarity=0.146 Sum_probs=20.5
Q ss_pred CCceEEEecCCchh--HHHHHHHh-----CCCcEEEecc
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-----GLPSALFFTI 154 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~ 154 (199)
.+||+||.|..++. +.++++++ ++|.+++...
T Consensus 48 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~pii~lt~~ 86 (394)
T 3eq2_A 48 EQPDLVICDLRMPQIDGLELIRRIRQTASETPIIVLSGA 86 (394)
T ss_dssp SCCSEEEECCCSSSSCTHHHHHHHHHTTCCCCEEEC---
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhCCCCcEEEEEcC
Confidence 47999999997764 45555554 5777665543
No 230
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=23.71 E-value=79 Score=22.92 Aligned_cols=31 Identities=16% Similarity=0.054 Sum_probs=18.8
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEecc
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFFTI 154 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~ 154 (199)
+||+||.|..++. +.++.+++ ++|.+++...
T Consensus 51 ~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~ 88 (215)
T 1a04_A 51 DPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVS 88 (215)
T ss_dssp CCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECC
Confidence 5888988886653 44444443 4566655544
No 231
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=23.67 E-value=59 Score=25.99 Aligned_cols=41 Identities=5% Similarity=0.025 Sum_probs=26.6
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCchhhhhh
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFNHRCFL 52 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~~~~~~ 52 (199)
..++|.++-..+.| ..+|..|++.|++|+++..+...+.+.
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~ 58 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIE 58 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHH
Confidence 36788888555555 346889999999999993333333443
No 232
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=23.40 E-value=49 Score=24.34 Aligned_cols=20 Identities=15% Similarity=0.101 Sum_probs=17.3
Q ss_pred HHHHHHhhhcCcEEEEEeCC
Q 046053 26 LQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 26 l~La~~La~~G~~VT~~t~~ 45 (199)
..++++|+++|++|+.+.-.
T Consensus 14 ~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 14 KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp HHHHHHHTTSSCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57899999999999998754
No 233
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=23.39 E-value=84 Score=23.46 Aligned_cols=37 Identities=8% Similarity=0.067 Sum_probs=29.1
Q ss_pred cceEEEEcCCCcccH-----HHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 8 KVHAVCIPSPFQSHI-----KAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~-----~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
...|+++| |+|-. .+.-+|++.|.++|.+|.|..-+-
T Consensus 30 A~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 30 SHSVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp CSEEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CCeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 34576765 56643 799999999999999999988653
No 234
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=23.30 E-value=1.3e+02 Score=22.68 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=25.3
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
+-++++|+-.+.| + -..+|++|+++|++|.++.-.
T Consensus 8 ~gk~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 8 EGKVALVTGASRG-I--GKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp TTCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 4457777766543 2 357899999999999887643
No 235
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=23.22 E-value=53 Score=27.01 Aligned_cols=26 Identities=15% Similarity=0.189 Sum_probs=23.1
Q ss_pred ccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 20 SHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 20 GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
||..|.+.-.+.|.+.||++.++...
T Consensus 28 Gn~~g~l~~~~~lQ~~G~~~~~~IaD 53 (340)
T 2g36_A 28 GHLVGALENWVKLQEEGNECFYFVAD 53 (340)
T ss_dssp HHHHTHHHHHHHHHHTTCEEEEEECH
T ss_pred HhHHHHHHHHHHHHHCCCCEEEEEec
Confidence 88888888888899999999999876
No 236
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=23.16 E-value=1.1e+02 Score=23.97 Aligned_cols=38 Identities=3% Similarity=-0.169 Sum_probs=30.7
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
..|++..-.|.|=..-...||..|+++|.+|-++=...
T Consensus 42 ~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 42 KVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred eEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 34455555777889999999999999999999987654
No 237
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=23.06 E-value=1.3e+02 Score=21.90 Aligned_cols=33 Identities=6% Similarity=0.126 Sum_probs=21.6
Q ss_pred CceEEEecCCchh--HHHHHHH----hCCCcEEEecchh
Q 046053 124 AVSCIISDDFMAF--TITAAQR----LGLPSALFFTISA 156 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~----lgIP~v~~~~~~a 156 (199)
+||+||.|..++. +..+.++ -++|++++....-
T Consensus 48 ~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~~ 86 (230)
T 2oqr_A 48 GADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDS 86 (230)
T ss_dssp CCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCCc
Confidence 6899999986653 3444433 3688887765543
No 238
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=23.04 E-value=1.1e+02 Score=20.15 Aligned_cols=29 Identities=7% Similarity=0.045 Sum_probs=20.4
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEe
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFF 152 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~ 152 (199)
+||+||.|..++. +..+.+++ ++|++++.
T Consensus 60 ~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls 95 (138)
T 2b4a_A 60 TCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILT 95 (138)
T ss_dssp SCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEE
Confidence 6899999987653 55566554 47777665
No 239
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=23.04 E-value=1.3e+02 Score=24.17 Aligned_cols=62 Identities=19% Similarity=0.083 Sum_probs=35.8
Q ss_pred HHHHHHHHhhccCCCCCCCceEEEecCCchhH--HHHHHHhCCCcEEEecchhHHHHHHHhHHHHHHcCCCC
Q 046053 106 PFLDLLAKLSDSSNNVNPAVSCIISDDFMAFT--ITAAQRLGLPSALFFTISACSFKGLKQFQTLKEKGLFP 175 (199)
Q Consensus 106 ~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~--~~vA~~lgIP~v~~~~~~a~~~~~~~~~~~l~~~~~~~ 175 (199)
.++.+++.. .++.-+|.|.|++.+ ..+|.++|--++.+-........+.....+|.+.|.+.
T Consensus 231 l~~~~i~~~--------~~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~~~~~~~ 294 (319)
T 1eg2_A 231 VIERLVRAL--------SHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDGLID 294 (319)
T ss_dssp HHHHHHHHH--------SCTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHh--------CCCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHHHccCCc
Confidence 455666553 245678999999974 77889999998887777632222233345555555444
No 240
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=23.04 E-value=95 Score=26.48 Aligned_cols=41 Identities=12% Similarity=0.225 Sum_probs=30.6
Q ss_pred CCceEEEecCCchhHHHHHHHhCCCcEEE-ecchhHHHHHHH
Q 046053 123 PAVSCIISDDFMAFTITAAQRLGLPSALF-FTISACSFKGLK 163 (199)
Q Consensus 123 ~~~d~vI~D~~~~~~~~vA~~lgIP~v~~-~~~~a~~~~~~~ 163 (199)
....+++...+...+..+.+++|+|++.+ .+.+...+.-++
T Consensus 237 A~~ni~~~~~~~~~A~~Le~~~GiP~~~~~~p~G~~~T~~~l 278 (458)
T 3pdi_B 237 SVATLVVGQSLAGAADALAERTGVPDRRFGMLYGLDAVDAWL 278 (458)
T ss_dssp CSCEEEESGGGHHHHHHHHHHSCCCEEEECCSCHHHHHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHHCCCEEecCCCcCHHHHHHHH
Confidence 36778777776666788889999999987 577766665554
No 241
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=23.03 E-value=1.4e+02 Score=19.59 Aligned_cols=22 Identities=23% Similarity=0.176 Sum_probs=15.5
Q ss_pred CCceEEEecCCchh--HHHHHHHh
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL 144 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l 144 (199)
.+||+||.|...+. +.++.+++
T Consensus 54 ~~~dlvi~d~~l~~~~g~~~~~~l 77 (143)
T 2qv0_A 54 NKVDAIFLDINIPSLDGVLLAQNI 77 (143)
T ss_dssp CCCSEEEECSSCSSSCHHHHHHHH
T ss_pred CCCCEEEEecCCCCCCHHHHHHHH
Confidence 36899999986653 55666655
No 242
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=22.97 E-value=65 Score=25.08 Aligned_cols=32 Identities=13% Similarity=0.186 Sum_probs=23.5
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
++|.++-. |.+- ..+|+.|+++||+|+++...
T Consensus 4 m~i~iiG~---G~~G--~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGA---GAMG--SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECC---SHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECc---CHHH--HHHHHHHHhCCCcEEEEECC
Confidence 57777754 4443 35689999999999998764
No 243
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=22.96 E-value=83 Score=24.47 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=24.0
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
++++|.++-....|. .+++.|+++|++|+++...
T Consensus 4 M~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp --CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSC
T ss_pred ccceEEEECchHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 346788887655554 3588899999999887654
No 244
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=22.69 E-value=1.3e+02 Score=23.01 Aligned_cols=33 Identities=12% Similarity=0.100 Sum_probs=25.4
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEe
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVN 43 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t 43 (199)
+-++++|+-.+.| =-..+|++|+++|++|.++.
T Consensus 10 ~~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~ 42 (262)
T 3ksu_A 10 KNKVIVIAGGIKN---LGALTAKTFALESVNLVLHY 42 (262)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEE
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEe
Confidence 4467788877665 24678999999999998874
No 245
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=22.62 E-value=1.8e+02 Score=19.43 Aligned_cols=38 Identities=8% Similarity=0.013 Sum_probs=30.5
Q ss_pred CcceEEEEcCCCcccHH-HHHHHHHHhhhcCcEEEEEeC
Q 046053 7 YKVHAVCIPSPFQSHIK-AMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~-P~l~La~~La~~G~~VT~~t~ 44 (199)
...+|++++..|.|.-. -...|-+.+..+|.++.+-..
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 35689999999999987 467888888889998765443
No 246
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=22.61 E-value=2.1e+02 Score=20.38 Aligned_cols=45 Identities=7% Similarity=-0.075 Sum_probs=29.1
Q ss_pred CCCCC-CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 1 MAISL-HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 1 ~~~~~-~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
|...+ .+..+|+++-+++.. ..-+......|...|++|++++...
T Consensus 1 m~~~~~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 1 MTKAKDLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp -----CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCCCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 44433 345789999887765 3345555677778899999998764
No 247
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=22.59 E-value=1.4e+02 Score=25.31 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=33.6
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhc-CcEEEEEeCCchh
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHK-GFHITCVNTEFNH 48 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~-G~~VT~~t~~~~~ 48 (199)
..|+++.-+|.|=..-...||..|+.+ |.+|.++......
T Consensus 101 ~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 345566668889999999999999999 9999999987643
No 248
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=22.49 E-value=1.1e+02 Score=22.29 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=27.0
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
..+-|++++..+.+ -.-+..+++.|+++|++|..+--.
T Consensus 25 ~~~~vv~~hG~~~~-~~~~~~~~~~l~~~G~~v~~~d~~ 62 (286)
T 3qit_A 25 EHPVVLCIHGILEQ-GLAWQEVALPLAAQGYRVVAPDLF 62 (286)
T ss_dssp TSCEEEEECCTTCC-GGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCCEEEEECCCCcc-cchHHHHHHHhhhcCeEEEEECCC
Confidence 34567777765443 334678899999999999887543
No 249
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=22.48 E-value=1.4e+02 Score=21.68 Aligned_cols=40 Identities=10% Similarity=0.017 Sum_probs=29.7
Q ss_pred CCcceEEEEcCCCcccHH---HHHHHHHHhhhcCcEEEEEeCC
Q 046053 6 HYKVHAVCIPSPFQSHIK---AMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~---P~l~La~~La~~G~~VT~~t~~ 45 (199)
...+.|+++..-+.+.-. -+..|++.|.++|++|.++..+
T Consensus 3 ~~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p 45 (243)
T 1ycd_A 3 VQIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAP 45 (243)
T ss_dssp CCCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCS
T ss_pred CcCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCC
Confidence 345778888876665443 2457899999999999888776
No 250
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=22.40 E-value=1.1e+02 Score=24.35 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=26.3
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
.++|.++-....| ..+|+.|+++||+|+++....
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCCH
Confidence 4689998665556 457899999999999986543
No 251
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=22.34 E-value=1.2e+02 Score=24.65 Aligned_cols=42 Identities=10% Similarity=0.019 Sum_probs=35.7
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
.+...|+++-.|+.|=..=+..|+..|+.+|.+|.++.....
T Consensus 77 ~~~~~I~i~G~~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp~ 118 (355)
T 3p32_A 77 GNAHRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPS 118 (355)
T ss_dssp CCSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEEEC--
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHHHhCCCceEEEecCCC
Confidence 345678889999999999999999999999999999887643
No 252
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=22.27 E-value=81 Score=24.93 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=23.5
Q ss_pred Cce-EEEecCCch-hHHHHHHHhCCCcEEEecc
Q 046053 124 AVS-CIISDDFMA-FTITAAQRLGLPSALFFTI 154 (199)
Q Consensus 124 ~~d-~vI~D~~~~-~~~~vA~~lgIP~v~~~~~ 154 (199)
.|| +||.|...- -+..-|.++|||.+.++-+
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDT 183 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNT 183 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEEcC
Confidence 467 556787554 4788899999999998654
No 253
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Probab=22.23 E-value=77 Score=25.75 Aligned_cols=26 Identities=15% Similarity=0.212 Sum_probs=21.0
Q ss_pred ccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 20 SHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 20 GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
||+.|++. .++|.+.||++.++....
T Consensus 50 Gh~l~l~~-~~~lQ~~g~~~~~~i~D~ 75 (322)
T 2yxn_A 50 GHLVPLLC-LKRFQQAGHKPVALVGGA 75 (322)
T ss_dssp HHHHHHHH-HHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHH-HHHHHHcCCcEEEEEccc
Confidence 99998665 568888999999988753
No 254
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=22.20 E-value=1.1e+02 Score=23.42 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=24.4
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeC
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~ 44 (199)
-++++|+-.+.| =-..++++|+++|++|+++.-
T Consensus 11 ~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 11 CPAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356777765543 235789999999999998865
No 255
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=22.09 E-value=1.3e+02 Score=21.30 Aligned_cols=36 Identities=22% Similarity=0.224 Sum_probs=24.4
Q ss_pred cceEEEEcC----CCcccHHHHHHHHHHhhhcCcEEEEEe
Q 046053 8 KVHAVCIPS----PFQSHIKAMLQSAKLLHHKGFHITCVN 43 (199)
Q Consensus 8 ~~hvv~vp~----p~~GH~~P~l~La~~La~~G~~VT~~t 43 (199)
++-|+++.- .+.+.-.-+..+++.|+++|+.|..+-
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d 76 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFN 76 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEEC
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEe
Confidence 566677663 233333446789999999999887664
No 256
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=21.92 E-value=91 Score=22.71 Aligned_cols=38 Identities=18% Similarity=0.304 Sum_probs=27.1
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeC
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~ 44 (199)
..++.|+++..-+. ...-...+++.|+++|++|..+--
T Consensus 10 ~~~~~vvllHG~~~-~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 10 FVKKHFVLVHAAFH-GAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp CCCCEEEEECCTTC-CGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCCCeEEEECCCCC-CcchHHHHHHHHHhcCCeEEEecc
Confidence 34577888876553 334455888999999999887754
No 257
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=21.91 E-value=97 Score=23.43 Aligned_cols=29 Identities=7% Similarity=0.148 Sum_probs=20.6
Q ss_pred CceEEEecCCch--hHHHHHHHhCCCcEEEe
Q 046053 124 AVSCIISDDFMA--FTITAAQRLGLPSALFF 152 (199)
Q Consensus 124 ~~d~vI~D~~~~--~~~~vA~~lgIP~v~~~ 152 (199)
+||+||...... ...+--++.|||++.+.
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 789999886543 23344467899999884
No 258
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=21.70 E-value=62 Score=24.13 Aligned_cols=19 Identities=16% Similarity=0.291 Sum_probs=16.1
Q ss_pred HHHHHHhhhcCcEEEEEeC
Q 046053 26 LQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 26 l~La~~La~~G~~VT~~t~ 44 (199)
.+++++|+++|++|+++.-
T Consensus 15 ~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 15 AALKELLARAGHTVIGIDR 33 (255)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHhCCCEEEEEeC
Confidence 4678999999999998864
No 259
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=21.69 E-value=62 Score=24.01 Aligned_cols=32 Identities=31% Similarity=0.436 Sum_probs=22.0
Q ss_pred EEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 11 AVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 11 vv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
.++|+-.+ |-+ -..++++|+++|++|+++.-.
T Consensus 7 ~vlVtGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 7 AVLITGAS-RGI--GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp EEEESSTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCC-cHH--HHHHHHHHHHCCCEEEEEECC
Confidence 44555433 323 367899999999999887654
No 260
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A*
Probab=21.53 E-value=80 Score=26.11 Aligned_cols=27 Identities=19% Similarity=0.260 Sum_probs=21.7
Q ss_pred ccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 20 SHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 20 GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
||+.|++. .++|.+.||++.++.....
T Consensus 63 Ghl~~l~~-~~~lQ~~G~~~~~lIaD~h 89 (356)
T 2pid_A 63 GHLLALLG-LFHLQRAGHNVIALVGGAT 89 (356)
T ss_dssp HHHHHHHH-HHHHHHTTCEEEEEECTTG
T ss_pred HHHHHHHH-HHHHHHCCCcEEEEEccce
Confidence 99898877 5688888999999886543
No 261
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=21.53 E-value=1.2e+02 Score=22.91 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=24.0
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
-++++|+-.+.| + -..++++|+++|++|+++.-.
T Consensus 14 ~k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 14 NKVALVTASTDG-I--GLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp TCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 356677655432 2 457899999999999887654
No 262
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=21.48 E-value=82 Score=20.23 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=20.3
Q ss_pred CCceEEEecCCchh--HHHHHHHh-------CCCcEEEecc
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL-------GLPSALFFTI 154 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l-------gIP~v~~~~~ 154 (199)
.+||+||.|..++. +..+.+++ ++|.+++...
T Consensus 45 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (127)
T 2jba_A 45 PWPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVVMLTAR 85 (127)
T ss_dssp SCCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEEEEEET
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhCcccCCCCEEEEeCC
Confidence 47999999986653 44444443 4676666543
No 263
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=21.42 E-value=1e+02 Score=24.85 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=29.8
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCchhHHHHHHHhCCCcEEEe
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMAFTITAAQRLGLPSALFF 152 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~~~~~vA~~lgIP~v~~~ 152 (199)
..+++++...... .....+.+||+|-- .+..+|+++|||++.+-
T Consensus 117 ~nl~~ll~~~~~g--~l~~~I~~Visn~~--~~~~~A~~~gIp~~~~~ 160 (302)
T 3o1l_A 117 HCLADLLHRWHSD--ELDCDIACVISNHQ--DLRSMVEWHDIPYYHVP 160 (302)
T ss_dssp HHHHHHHHHHHTT--CSCSEEEEEEESSS--TTHHHHHTTTCCEEECC
T ss_pred hhHHHHHHHHHCC--CCCcEEEEEEECcH--HHHHHHHHcCCCEEEcC
Confidence 5788888766431 00135789999752 24568999999998873
No 264
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=21.40 E-value=99 Score=21.54 Aligned_cols=38 Identities=16% Similarity=0.003 Sum_probs=24.3
Q ss_pred cceEEEEcCCCcccH-HHHHHHHHHhhhcCcEEEEEeCC
Q 046053 8 KVHAVCIPSPFQSHI-KAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~-~P~l~La~~La~~G~~VT~~t~~ 45 (199)
++.|+++..-+.+.- .-.-.+++.|+++|++|..+.-.
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 42 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMP 42 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCS
T ss_pred CCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCC
Confidence 466888876555433 22223456788899999887554
No 265
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=21.37 E-value=1.1e+02 Score=26.37 Aligned_cols=25 Identities=20% Similarity=0.103 Sum_probs=20.8
Q ss_pred CceEEEecCCchhHHHHHHHhCCCcEEE
Q 046053 124 AVSCIISDDFMAFTITAAQRLGLPSALF 151 (199)
Q Consensus 124 ~~d~vI~D~~~~~~~~vA~~lgIP~v~~ 151 (199)
+||++|.. .....+|+++|||++-+
T Consensus 417 ~pDL~ig~---~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 417 KPDLIGSG---IKEKFIFQKMGIPFREM 441 (492)
T ss_dssp CCSEEEEC---HHHHHHHHHTTCCEEES
T ss_pred CCcEEEeC---cchhHHHHHcCCCEEec
Confidence 68999985 45678999999999964
No 266
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=21.33 E-value=1e+02 Score=24.99 Aligned_cols=39 Identities=8% Similarity=0.056 Sum_probs=33.7
Q ss_pred CcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 7 YKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 7 ~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
....|++...|..+|..|..+++++..++|.+|...+..
T Consensus 81 ~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~ 119 (325)
T 3ing_A 81 EAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKS 119 (325)
T ss_dssp SCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCH
T ss_pred CCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCch
Confidence 356799999999999999999999999999988876553
No 267
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=21.13 E-value=1.1e+02 Score=23.06 Aligned_cols=32 Identities=19% Similarity=0.182 Sum_probs=20.6
Q ss_pred CCceEEEecCCchhHHH-HHHHhCCCcEEEecc
Q 046053 123 PAVSCIISDDFMAFTIT-AAQRLGLPSALFFTI 154 (199)
Q Consensus 123 ~~~d~vI~D~~~~~~~~-vA~~lgIP~v~~~~~ 154 (199)
.++|.||.-........ .+.+.|||+|.+...
T Consensus 63 ~~~dgiIi~~~~~~~~~~~l~~~~iPvV~~~~~ 95 (277)
T 3e61_A 63 HNCTGMISTAFNENIIENTLTDHHIPFVFIDRI 95 (277)
T ss_dssp TTCSEEEECGGGHHHHHHHHHHC-CCEEEGGGC
T ss_pred CCCCEEEEecCChHHHHHHHHcCCCCEEEEecc
Confidence 36888887663333455 667779999987554
No 268
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=21.09 E-value=71 Score=25.15 Aligned_cols=34 Identities=9% Similarity=-0.090 Sum_probs=26.0
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
+++|.++-....|. .+|+.|+++||+|+++....
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCCH
Confidence 46788886655554 57899999999999986543
No 269
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=20.91 E-value=86 Score=20.23 Aligned_cols=33 Identities=3% Similarity=-0.091 Sum_probs=19.9
Q ss_pred CCceEEEecCCchh--HHHHHHH-------hCCCcEEEecch
Q 046053 123 PAVSCIISDDFMAF--TITAAQR-------LGLPSALFFTIS 155 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~-------lgIP~v~~~~~~ 155 (199)
.+||+||.|..++. +.++.++ -++|.+++....
T Consensus 46 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 87 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFA 87 (127)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCc
Confidence 37999999986543 3444433 246766665543
No 270
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=20.90 E-value=1.1e+02 Score=20.03 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=19.8
Q ss_pred CCceEEEecCCchh--HHHHHHHh------CCCcEEEecc
Q 046053 123 PAVSCIISDDFMAF--TITAAQRL------GLPSALFFTI 154 (199)
Q Consensus 123 ~~~d~vI~D~~~~~--~~~vA~~l------gIP~v~~~~~ 154 (199)
.+||+||.|..++. +..+.+++ .+|.+++...
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~ 90 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAF 90 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECC
Confidence 36899999987763 44444332 4666655444
No 271
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=20.85 E-value=1.2e+02 Score=26.41 Aligned_cols=40 Identities=8% Similarity=0.017 Sum_probs=34.4
Q ss_pred cceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCch
Q 046053 8 KVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEFN 47 (199)
Q Consensus 8 ~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~~ 47 (199)
...|+++-.++.|=..-+..|+..|+.+|.+|.++.....
T Consensus 101 ~~vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~ 140 (504)
T 2j37_W 101 QNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTF 140 (504)
T ss_dssp -EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEecccc
Confidence 4567888889999999999999999999999999987543
No 272
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=20.80 E-value=1.3e+02 Score=19.59 Aligned_cols=31 Identities=16% Similarity=0.212 Sum_probs=18.4
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEecc
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFFTI 154 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~ 154 (199)
+||+||.|..++. +..+.+++ .+|.+++...
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (136)
T 1mvo_A 47 KPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAK 84 (136)
T ss_dssp CCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECC
Confidence 6899999976542 34444332 4676665543
No 273
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=20.77 E-value=58 Score=23.93 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=23.1
Q ss_pred ceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 9 VHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 9 ~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
++|++.- +.|.+- ..|+++|+++|++|+.+.-..
T Consensus 5 ~~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIG--ASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEET--CCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEc--CCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 4555442 334443 477999999999999987543
No 274
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=20.60 E-value=1.5e+02 Score=19.81 Aligned_cols=31 Identities=16% Similarity=0.000 Sum_probs=18.4
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEecc
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFFTI 154 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~ 154 (199)
++|+||.|..++. +.++.+++ ++|.+++...
T Consensus 48 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 85 (151)
T 3kcn_A 48 PFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGN 85 (151)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECG
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECC
Confidence 5799999986543 34444332 4666655443
No 275
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=20.49 E-value=72 Score=26.56 Aligned_cols=25 Identities=20% Similarity=0.377 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 22 IKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 22 ~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
.-+|.+|.+.|.++|++|.+++...
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~ 247 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASF 247 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCc
Confidence 4679999999999999999998764
No 276
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=20.45 E-value=71 Score=25.18 Aligned_cols=36 Identities=8% Similarity=-0.030 Sum_probs=25.0
Q ss_pred CCcceEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCCc
Q 046053 6 HYKVHAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTEF 46 (199)
Q Consensus 6 ~~~~hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~~ 46 (199)
..+++|.++-....| ..+|+.|+++||+|+++....
T Consensus 5 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECCH
Confidence 345678888444444 357899999999999996543
No 277
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=20.43 E-value=1.3e+02 Score=25.52 Aligned_cols=43 Identities=19% Similarity=0.148 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhccCCCCCCCceEEEecCCch-------------------hHHHHHHHhCCCcEEEe
Q 046053 105 QPFLDLLAKLSDSSNNVNPAVSCIISDDFMA-------------------FTITAAQRLGLPSALFF 152 (199)
Q Consensus 105 ~~~~~ll~~l~~~~~~~~~~~d~vI~D~~~~-------------------~~~~vA~~lgIP~v~~~ 152 (199)
..+...++.+..+ .++++||.|.+.. ....+|+++|||+++..
T Consensus 340 ~~i~~~i~~~~~~-----~~~~lvVID~l~~l~~~~~~~~~~~~~~~~~~~Lk~lak~~~i~vi~~~ 401 (503)
T 1q57_A 340 DRLLAKLAYMRSG-----LGCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVIC 401 (503)
T ss_dssp HHHHHHHHHHHHT-----TCCSEEEEECTTCCCSCCSCCCHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHh-----cCCCEEEEccchhcCCCCCCCCHHHHHHHHHHHHHHHHHHHCCeEEEEE
No 278
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=20.33 E-value=89 Score=20.80 Aligned_cols=32 Identities=25% Similarity=0.273 Sum_probs=20.6
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEecch
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFFTIS 155 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~~ 155 (199)
+||+||.|..++. +..+.+++ ++|++++....
T Consensus 67 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~ 105 (146)
T 4dad_A 67 AFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDA 105 (146)
T ss_dssp TCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 6899999987653 34444333 57777665543
No 279
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=20.24 E-value=70 Score=23.83 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=21.6
Q ss_pred EEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 11 AVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 11 vv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
.++|+-.+ |-+ -.+++++|+++|++|+++.-.
T Consensus 9 ~vlVTGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 9 RALVTGAG-KGI--GRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp EEEEESTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeCCC-chH--HHHHHHHHHHCCCEEEEEeCC
Confidence 34555433 333 347899999999999887654
No 280
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=20.24 E-value=62 Score=24.01 Aligned_cols=19 Identities=16% Similarity=0.394 Sum_probs=16.4
Q ss_pred HHHHHHhhhcCcEEEEEeC
Q 046053 26 LQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 26 l~La~~La~~G~~VT~~t~ 44 (199)
.+++++|+++|++|.++.-
T Consensus 16 ~~la~~l~~~G~~V~~~~r 34 (242)
T 1uay_A 16 RAAALALKARGYRVVVLDL 34 (242)
T ss_dssp HHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEcc
Confidence 6789999999999998764
No 281
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.15 E-value=94 Score=23.63 Aligned_cols=31 Identities=16% Similarity=0.277 Sum_probs=23.3
Q ss_pred Cce-EEEecCCch-hHHHHHHHhCCCcEEEecc
Q 046053 124 AVS-CIISDDFMA-FTITAAQRLGLPSALFFTI 154 (199)
Q Consensus 124 ~~d-~vI~D~~~~-~~~~vA~~lgIP~v~~~~~ 154 (199)
.|| +||.|...- -+..-|.++|||.+.+.-+
T Consensus 111 ~Pdllvv~Dp~~d~~ai~EA~~l~IP~Ial~DT 143 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAMREAVEIGIPIVALVDT 143 (202)
T ss_dssp CCSEEEESCTTTSHHHHHHHHHHTCCEEEEECT
T ss_pred CCCeEEEeCCccchHHHHHHHHcCCCEEEEEcC
Confidence 356 667887544 4677899999999998744
No 282
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=20.07 E-value=70 Score=23.83 Aligned_cols=33 Identities=15% Similarity=0.071 Sum_probs=22.4
Q ss_pred eEEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeCC
Q 046053 10 HAVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNTE 45 (199)
Q Consensus 10 hvv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~~ 45 (199)
++++|+-.+ |-+ -.+++++|+++|++|+++.-.
T Consensus 8 ~~vlVtGas-ggi--G~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 8 KVSLVTGST-RGI--GRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp CEEEETTCS-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCC-chH--HHHHHHHHHHCCCEEEEEeCC
Confidence 345565443 322 356799999999999988654
No 283
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=20.06 E-value=68 Score=24.08 Aligned_cols=31 Identities=3% Similarity=0.142 Sum_probs=21.8
Q ss_pred EEEEcCCCcccHHHHHHHHHHhhhcCcEEEEEeC
Q 046053 11 AVCIPSPFQSHIKAMLQSAKLLHHKGFHITCVNT 44 (199)
Q Consensus 11 vv~vp~p~~GH~~P~l~La~~La~~G~~VT~~t~ 44 (199)
+++|+-.+.| + -.+++++|+++|++|.++.-
T Consensus 9 ~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 9 RVLVYGGRGA-L--GSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp EEEEETTTSH-H--HHHHHHHHHTTTCEEEEEES
T ss_pred EEEEECCCcH-H--HHHHHHHHHhCCCEEEEEeC
Confidence 4566654432 2 35789999999999988754
No 284
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=20.06 E-value=66 Score=25.32 Aligned_cols=25 Identities=28% Similarity=0.280 Sum_probs=15.7
Q ss_pred EEEecC--CchhHHHHHHHhCCCcEEE
Q 046053 127 CIISDD--FMAFTITAAQRLGLPSALF 151 (199)
Q Consensus 127 ~vI~D~--~~~~~~~vA~~lgIP~v~~ 151 (199)
.||++. ..+.+..+|+.+|||+++=
T Consensus 178 givt~~Gg~tSH~AIlAR~lgIPavvg 204 (258)
T 1zym_A 178 GFITDAGGRTSHTSIMARSLELPAIVG 204 (258)
T ss_dssp EEECSCCCSSSHHHHHHHHHTCCEECC
T ss_pred EEEEcCCCcccHHHHHHHHcCCCEEEe
Confidence 444443 2334566899999998763
No 285
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.05 E-value=1.8e+02 Score=18.62 Aligned_cols=33 Identities=9% Similarity=-0.038 Sum_probs=21.2
Q ss_pred CceEEEecCCchh--HHHHHHH-------hCCCcEEEecchh
Q 046053 124 AVSCIISDDFMAF--TITAAQR-------LGLPSALFFTISA 156 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~-------lgIP~v~~~~~~a 156 (199)
+||+||.|..++. +.++.++ -++|++++....-
T Consensus 55 ~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~ 96 (140)
T 1k68_A 55 RPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSIN 96 (140)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCC
T ss_pred CCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCCc
Confidence 6999999986652 3444433 3578777766543
No 286
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=20.05 E-value=67 Score=23.76 Aligned_cols=31 Identities=13% Similarity=0.091 Sum_probs=19.9
Q ss_pred CceEEEecCCchh--HHHHHHHh-----CCCcEEEecc
Q 046053 124 AVSCIISDDFMAF--TITAAQRL-----GLPSALFFTI 154 (199)
Q Consensus 124 ~~d~vI~D~~~~~--~~~vA~~l-----gIP~v~~~~~ 154 (199)
+||+||.|..++. +.++.+++ ++|.+++...
T Consensus 47 ~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~ 84 (225)
T 3c3w_A 47 RPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSY 84 (225)
T ss_dssp CCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGGS
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEECC
Confidence 6899999987653 44444433 5676665443
Done!