Query 046057
Match_columns 1198
No_of_seqs 298 out of 2199
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 08:20:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046057.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046057hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02316 synthase/transferase 100.0 1E-223 2E-228 2057.2 111.6 1034 69-1198 1-1036(1036)
2 PLN02939 transferase, transfer 100.0 1.3E-73 2.8E-78 701.7 48.8 502 643-1197 421-968 (977)
3 PRK14098 glycogen synthase; Pr 100.0 3.3E-65 7.1E-70 609.3 45.8 434 708-1198 4-488 (489)
4 PRK14099 glycogen synthase; Pr 100.0 2.3E-64 5E-69 601.5 45.1 433 708-1197 2-480 (485)
5 PRK00654 glgA glycogen synthas 100.0 1.1E-62 2.4E-67 583.9 45.0 428 710-1198 1-465 (466)
6 TIGR02095 glgA glycogen/starch 100.0 2E-61 4.4E-66 573.1 44.8 430 710-1196 1-473 (473)
7 COG0297 GlgA Glycogen synthase 100.0 1.2E-61 2.6E-66 571.4 41.4 434 710-1197 1-479 (487)
8 cd03791 GT1_Glycogen_synthase_ 100.0 2.3E-58 4.9E-63 545.1 42.9 430 711-1195 1-476 (476)
9 PLN02316 synthase/transferase 100.0 1.3E-58 2.7E-63 578.5 33.8 279 248-547 300-585 (1036)
10 TIGR02094 more_P_ylases alpha- 100.0 2.9E-41 6.3E-46 409.7 41.6 424 712-1194 1-599 (601)
11 TIGR02472 sucr_P_syn_N sucrose 100.0 3.9E-38 8.4E-43 371.3 41.8 371 724-1194 24-439 (439)
12 TIGR03449 mycothiol_MshA UDP-N 100.0 2.3E-38 5.1E-43 365.8 39.1 374 712-1198 1-404 (405)
13 TIGR02470 sucr_synth sucrose s 100.0 5.1E-38 1.1E-42 386.6 42.2 403 708-1193 254-745 (784)
14 TIGR02468 sucrsPsyn_pln sucros 100.0 9.9E-38 2.1E-42 390.3 43.0 415 706-1196 166-671 (1050)
15 TIGR02149 glgA_Coryne glycogen 100.0 2.6E-37 5.5E-42 353.3 39.6 362 710-1197 1-388 (388)
16 PLN02871 UDP-sulfoquinovose:DA 100.0 5.1E-36 1.1E-40 355.7 42.2 359 707-1197 56-436 (465)
17 cd03796 GT1_PIG-A_like This fa 100.0 3.8E-36 8.2E-41 348.8 39.0 357 711-1197 1-369 (398)
18 PRK10307 putative glycosyl tra 100.0 1.2E-35 2.7E-40 345.4 40.6 374 710-1197 1-409 (412)
19 cd04962 GT1_like_5 This family 100.0 2.1E-35 4.6E-40 334.0 39.5 358 710-1196 1-371 (371)
20 PLN00142 sucrose synthase 100.0 1.2E-35 2.7E-40 365.7 37.7 402 709-1193 279-768 (815)
21 PRK15427 colanic acid biosynth 100.0 8.1E-35 1.8E-39 340.6 35.4 270 829-1195 116-405 (406)
22 cd04299 GT1_Glycogen_Phosphory 100.0 3.3E-34 7.1E-39 353.8 40.0 424 711-1193 87-687 (778)
23 TIGR03088 stp2 sugar transfera 100.0 7.5E-34 1.6E-38 324.5 39.0 355 709-1197 1-374 (374)
24 cd03800 GT1_Sucrose_synthase T 100.0 9.6E-34 2.1E-38 322.5 38.6 355 724-1191 19-398 (398)
25 PRK15484 lipopolysaccharide 1, 100.0 1.8E-33 3.8E-38 326.0 38.4 360 710-1197 3-379 (380)
26 cd03792 GT1_Trehalose_phosphor 100.0 7.9E-34 1.7E-38 325.6 35.0 356 711-1196 1-372 (372)
27 cd03802 GT1_AviGT4_like This f 100.0 3.2E-33 6.9E-38 310.9 37.7 331 710-1194 1-335 (335)
28 cd03805 GT1_ALG2_like This fam 100.0 4.5E-33 9.8E-38 318.8 36.1 356 710-1189 1-392 (392)
29 cd04951 GT1_WbdM_like This fam 100.0 2.3E-32 4.9E-37 306.0 38.8 351 711-1194 1-359 (360)
30 cd03819 GT1_WavL_like This fam 100.0 1.4E-32 3E-37 308.2 36.7 314 724-1115 8-325 (355)
31 cd04955 GT1_like_6 This family 100.0 1E-31 2.3E-36 301.5 39.8 346 711-1194 1-363 (363)
32 cd03818 GT1_ExpC_like This fam 100.0 3.1E-32 6.7E-37 315.7 35.2 356 711-1191 1-396 (396)
33 PRK15179 Vi polysaccharide bio 100.0 1E-31 2.2E-36 330.8 39.4 375 707-1194 278-692 (694)
34 cd03825 GT1_wcfI_like This fam 100.0 1.2E-31 2.6E-36 300.7 34.8 320 710-1196 1-365 (365)
35 cd03807 GT1_WbnK_like This fam 100.0 2.5E-31 5.4E-36 292.8 36.4 350 711-1194 1-365 (365)
36 cd03823 GT1_ExpE7_like This fa 100.0 5.5E-31 1.2E-35 291.3 36.9 357 711-1194 1-358 (359)
37 cd03795 GT1_like_4 This family 100.0 5.1E-31 1.1E-35 294.8 37.0 343 711-1186 1-357 (357)
38 cd03821 GT1_Bme6_like This fam 100.0 5.3E-31 1.1E-35 291.2 35.9 354 711-1191 1-375 (375)
39 cd05844 GT1_like_7 Glycosyltra 100.0 2.8E-31 6.1E-36 300.0 33.9 341 711-1192 1-367 (367)
40 cd03801 GT1_YqgM_like This fam 100.0 2.4E-30 5.2E-35 282.5 39.6 356 711-1194 1-374 (374)
41 PRK10125 putative glycosyl tra 100.0 4.7E-31 1E-35 309.1 36.3 317 710-1115 1-366 (405)
42 cd03822 GT1_ecORF704_like This 100.0 2.6E-30 5.7E-35 287.8 39.2 350 711-1194 1-366 (366)
43 cd03812 GT1_CapH_like This fam 100.0 6.1E-31 1.3E-35 295.3 34.2 314 711-1115 1-326 (358)
44 PRK09922 UDP-D-galactose:(gluc 100.0 4.5E-31 9.8E-36 302.4 33.0 346 710-1197 1-357 (359)
45 cd03814 GT1_like_2 This family 100.0 3E-30 6.5E-35 286.6 37.9 346 711-1194 1-364 (364)
46 PLN02846 digalactosyldiacylgly 100.0 9E-31 2E-35 309.4 35.7 361 708-1194 3-390 (462)
47 cd03799 GT1_amsK_like This is 100.0 2E-30 4.4E-35 289.7 36.6 339 711-1188 1-354 (355)
48 cd03817 GT1_UGDG_like This fam 100.0 3.9E-30 8.5E-35 284.8 38.0 351 711-1195 1-373 (374)
49 cd03794 GT1_wbuB_like This fam 100.0 3.6E-30 7.7E-35 285.3 36.8 365 711-1190 1-394 (394)
50 cd03809 GT1_mtfB_like This fam 100.0 7.7E-31 1.7E-35 292.0 31.4 347 711-1191 1-365 (365)
51 cd03820 GT1_amsD_like This fam 100.0 1.9E-29 4.2E-34 275.3 35.7 335 711-1191 1-348 (348)
52 cd03793 GT1_Glycogen_synthase_ 100.0 6.9E-30 1.5E-34 304.0 34.1 422 715-1198 7-589 (590)
53 PRK15490 Vi polysaccharide bio 100.0 1.2E-29 2.7E-34 301.8 36.0 286 819-1195 270-575 (578)
54 cd03798 GT1_wlbH_like This fam 100.0 7.5E-29 1.6E-33 272.4 39.3 363 712-1196 1-377 (377)
55 cd03808 GT1_cap1E_like This fa 100.0 8.6E-29 1.9E-33 271.3 38.2 342 711-1190 1-358 (359)
56 cd03813 GT1_like_3 This family 100.0 5.8E-30 1.3E-34 305.2 29.8 274 829-1194 171-475 (475)
57 KOG1111 N-acetylglucosaminyltr 100.0 1.9E-30 4E-35 288.2 23.0 356 710-1198 1-369 (426)
58 cd03811 GT1_WabH_like This fam 100.0 4.2E-28 9E-33 264.7 34.7 313 711-1115 1-324 (353)
59 cd03816 GT1_ALG1_like This fam 100.0 6.4E-28 1.4E-32 282.9 37.8 325 710-1115 4-376 (415)
60 PLN02949 transferase, transfer 100.0 1.2E-27 2.6E-32 284.7 39.0 230 881-1198 218-459 (463)
61 cd03806 GT1_ALG11_like This fa 100.0 5.3E-28 1.1E-32 284.4 34.5 326 720-1115 7-387 (419)
62 PHA01633 putative glycosyl tra 100.0 5E-26 1.1E-30 260.1 34.2 252 860-1191 70-335 (335)
63 TIGR03087 stp1 sugar transfera 100.0 1.1E-26 2.4E-31 269.7 29.1 259 830-1194 103-395 (397)
64 PLN02501 digalactosyldiacylgly 100.0 1.9E-26 4.2E-31 276.8 31.6 329 706-1115 319-676 (794)
65 PF08323 Glyco_transf_5: Starc 100.0 6.2E-28 1.4E-32 265.2 14.5 188 711-900 1-232 (245)
66 TIGR02918 accessory Sec system 99.9 7.1E-26 1.5E-30 271.9 30.9 263 830-1196 210-500 (500)
67 cd03804 GT1_wbaZ_like This fam 99.9 6.6E-26 1.4E-30 257.0 27.4 213 830-1115 82-321 (351)
68 PLN02275 transferase, transfer 99.9 2.9E-25 6.4E-30 256.6 32.8 304 726-1115 15-368 (371)
69 cd04946 GT1_AmsK_like This fam 99.9 1.3E-24 2.7E-29 254.6 32.0 262 830-1190 126-406 (407)
70 PHA01630 putative group 1 glyc 99.9 1.6E-24 3.6E-29 247.9 26.8 194 842-1083 54-251 (331)
71 cd04949 GT1_gtfA_like This fam 99.9 2.2E-24 4.9E-29 246.1 26.7 257 830-1189 98-372 (372)
72 cd03788 GT1_TPS Trehalose-6-Ph 99.9 4E-24 8.6E-29 254.7 25.3 283 830-1192 130-458 (460)
73 PF03423 CBM_25: Carbohydrate 99.9 2.9E-25 6.3E-30 207.7 8.7 87 450-541 1-87 (87)
74 PRK00726 murG undecaprenyldiph 99.9 1.6E-22 3.4E-27 231.2 31.5 342 710-1194 2-356 (357)
75 TIGR02400 trehalose_OtsA alpha 99.9 1.3E-22 2.7E-27 241.4 29.6 259 816-1115 116-417 (456)
76 cd03785 GT1_MurG MurG is an N- 99.9 1.9E-21 4.1E-26 220.3 31.2 300 724-1115 8-319 (350)
77 TIGR01133 murG undecaprenyldip 99.9 2.3E-21 5.1E-26 219.4 30.1 306 710-1115 1-316 (348)
78 PF03423 CBM_25: Carbohydrate 99.9 2.1E-23 4.6E-28 195.1 8.3 85 275-360 1-87 (87)
79 PRK13609 diacylglycerol glucos 99.9 1.1E-20 2.3E-25 218.4 28.6 360 708-1196 3-372 (380)
80 PLN03063 alpha,alpha-trehalose 99.9 1.3E-20 2.7E-25 237.1 28.1 299 816-1197 136-479 (797)
81 PRK05749 3-deoxy-D-manno-octul 99.9 3.5E-20 7.6E-25 217.5 29.3 283 821-1197 116-421 (425)
82 cd01635 Glycosyltransferase_GT 99.9 5.4E-20 1.2E-24 191.2 25.3 226 712-1102 1-229 (229)
83 PRK14501 putative bifunctional 99.9 1.4E-20 3.1E-25 235.6 23.5 298 816-1197 122-464 (726)
84 KOG0853 Glycosyltransferase [C 99.8 2.6E-19 5.6E-24 210.6 26.2 396 707-1195 32-467 (495)
85 PF00534 Glycos_transf_1: Glyc 99.8 1.9E-19 4.1E-24 184.1 19.5 149 948-1115 2-153 (172)
86 PF05693 Glycogen_syn: Glycoge 99.8 2.3E-18 4.9E-23 204.9 28.7 413 715-1197 2-583 (633)
87 cd04950 GT1_like_1 Glycosyltra 99.8 7.8E-18 1.7E-22 195.0 31.7 260 828-1195 99-371 (373)
88 PLN02605 monogalactosyldiacylg 99.8 2.5E-18 5.4E-23 199.8 27.6 272 819-1193 90-379 (382)
89 PRK13608 diacylglycerol glucos 99.8 4.5E-18 9.8E-23 198.6 25.4 277 818-1196 93-372 (391)
90 TIGR02398 gluc_glyc_Psyn gluco 99.8 9.1E-18 2E-22 200.3 27.7 295 816-1193 121-480 (487)
91 COG0438 RfaG Glycosyltransfera 99.8 3.8E-16 8.3E-21 167.6 28.5 268 832-1197 84-378 (381)
92 PLN03064 alpha,alpha-trehalose 99.7 1.2E-15 2.6E-20 192.5 27.2 298 816-1196 220-562 (934)
93 TIGR00236 wecB UDP-N-acetylglu 99.7 6.4E-16 1.4E-20 178.0 23.0 245 813-1115 70-329 (365)
94 PRK00025 lpxB lipid-A-disaccha 99.7 2E-15 4.3E-20 174.1 26.8 237 819-1115 75-336 (380)
95 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 1.9E-15 4.1E-20 172.6 26.1 244 817-1115 76-332 (363)
96 PRK09814 beta-1,6-galactofuran 99.6 7.7E-13 1.7E-17 151.6 31.8 211 830-1115 62-295 (333)
97 KOG1387 Glycosyltransferase [C 99.6 2.9E-12 6.2E-17 143.2 31.4 234 829-1115 148-419 (465)
98 TIGR00215 lpxB lipid-A-disacch 99.4 1.2E-10 2.6E-15 136.6 27.2 215 818-1078 78-300 (385)
99 PF00982 Glyco_transf_20: Glyc 99.4 3.1E-11 6.7E-16 144.8 21.4 251 830-1115 140-435 (474)
100 PF13439 Glyco_transf_4: Glyco 99.3 1.1E-11 2.3E-16 124.9 13.6 158 716-923 4-176 (177)
101 PF13692 Glyco_trans_1_4: Glyc 99.3 6.1E-12 1.3E-16 123.9 11.4 125 962-1115 2-130 (135)
102 PRK10117 trehalose-6-phosphate 99.3 1.4E-10 3.1E-15 138.2 24.9 297 816-1196 112-454 (474)
103 TIGR03713 acc_sec_asp1 accesso 99.3 1.2E-10 2.5E-15 141.5 24.0 168 962-1193 319-519 (519)
104 PF13579 Glyco_trans_4_4: Glyc 99.3 1.4E-11 3.1E-16 122.1 11.9 150 726-917 1-160 (160)
105 PLN02205 alpha,alpha-trehalose 99.3 3.6E-10 7.8E-15 143.8 24.9 262 816-1115 189-512 (854)
106 COG0380 OtsA Trehalose-6-phosp 99.2 1E-08 2.2E-13 122.3 27.7 295 816-1194 136-478 (486)
107 PRK12446 undecaprenyldiphospho 99.0 2.9E-07 6.3E-12 107.1 31.9 261 724-1072 10-279 (352)
108 COG0058 GlgP Glucan phosphoryl 99.0 4.8E-08 1E-12 120.7 23.5 372 720-1106 110-632 (750)
109 COG0707 MurG UDP-N-acetylgluco 99.0 7.8E-07 1.7E-11 103.8 31.9 349 710-1196 1-354 (357)
110 PRK14986 glycogen phosphorylas 98.9 1.4E-07 3.1E-12 117.9 26.1 273 906-1195 456-809 (815)
111 KOG2941 Beta-1,4-mannosyltrans 98.9 1.1E-06 2.4E-11 99.5 28.9 282 830-1185 102-431 (444)
112 PRK14985 maltodextrin phosphor 98.9 1.4E-07 3.1E-12 117.5 22.6 271 908-1195 444-795 (798)
113 TIGR02093 P_ylase glycogen/sta 98.9 1.4E-07 3.1E-12 117.6 21.9 269 831-1111 297-685 (794)
114 cd04300 GT1_Glycogen_Phosphory 98.7 3.5E-07 7.5E-12 114.6 20.0 347 831-1194 300-795 (797)
115 PF13524 Glyco_trans_1_2: Glyc 98.6 1.4E-07 3E-12 88.2 9.6 89 1044-1191 1-92 (92)
116 PF00343 Phosphorylase: Carboh 98.5 6.8E-06 1.5E-10 102.0 22.6 345 832-1193 215-708 (713)
117 PF09314 DUF1972: Domain of un 98.5 5.7E-06 1.2E-10 88.3 18.8 169 711-919 3-185 (185)
118 PF13477 Glyco_trans_4_2: Glyc 98.5 2.3E-06 5.1E-11 85.0 14.1 128 711-891 1-139 (139)
119 cd03784 GT1_Gtf_like This fami 98.5 1.3E-05 2.7E-10 93.9 21.9 123 961-1115 239-367 (401)
120 TIGR02919 accessory Sec system 98.5 1.6E-05 3.5E-10 95.3 23.0 121 963-1115 283-406 (438)
121 TIGR03590 PseG pseudaminic aci 98.4 3.2E-05 6.9E-10 87.5 23.8 267 711-1073 1-268 (279)
122 TIGR03568 NeuC_NnaA UDP-N-acet 98.4 8.2E-05 1.8E-09 87.3 26.5 245 812-1115 76-334 (365)
123 KOG3742 Glycogen synthase [Car 98.4 1.3E-06 2.9E-11 100.8 10.7 255 809-1083 150-542 (692)
124 TIGR03492 conserved hypothetic 98.3 0.00014 2.9E-09 86.4 25.8 205 817-1074 79-324 (396)
125 PF13528 Glyco_trans_1_3: Glyc 98.2 0.00012 2.5E-09 83.0 22.2 121 961-1115 192-315 (318)
126 PF04007 DUF354: Protein of un 98.1 0.00035 7.6E-09 81.2 23.1 296 710-1115 1-305 (335)
127 PF13844 Glyco_transf_41: Glyc 98.0 0.0001 2.2E-09 88.6 16.8 115 951-1072 275-391 (468)
128 PF02350 Epimerase_2: UDP-N-ac 98.0 0.00042 9.2E-09 80.9 19.8 246 812-1115 50-313 (346)
129 COG1519 KdtA 3-deoxy-D-manno-o 97.9 0.012 2.5E-07 69.8 30.2 277 820-1194 114-416 (419)
130 COG3914 Spy Predicted O-linked 97.9 0.001 2.2E-08 80.4 21.5 115 952-1071 421-537 (620)
131 PF00862 Sucrose_synth: Sucros 97.6 0.0013 2.8E-08 78.8 16.9 181 724-928 294-532 (550)
132 TIGR00661 MJ1255 conserved hyp 97.6 0.013 2.8E-07 67.4 24.6 79 1021-1111 228-306 (321)
133 COG0763 LpxB Lipid A disacchar 97.6 0.0074 1.6E-07 70.7 21.4 198 830-1071 84-289 (381)
134 PF03370 CBM_21: Putative phos 97.3 0.00035 7.6E-09 69.1 5.2 76 463-539 29-113 (113)
135 PRK01021 lpxB lipid-A-disaccha 97.1 0.056 1.2E-06 67.2 22.4 199 830-1074 309-517 (608)
136 PF02684 LpxB: Lipid-A-disacch 97.0 0.026 5.7E-07 66.8 18.7 199 830-1075 81-290 (373)
137 COG1819 Glycosyl transferases, 97.0 0.054 1.2E-06 64.9 21.3 125 961-1115 237-363 (406)
138 PF03370 CBM_21: Putative phos 96.9 0.0013 2.8E-08 65.1 5.7 71 288-358 29-113 (113)
139 PHA03392 egt ecdysteroid UDP-g 96.9 0.21 4.5E-06 61.7 25.6 122 962-1115 297-427 (507)
140 COG0381 WecB UDP-N-acetylgluco 96.8 0.4 8.6E-06 56.8 25.2 232 830-1115 91-336 (383)
141 PRK10017 colanic acid biosynth 96.8 2.1 4.6E-05 51.9 32.0 183 859-1071 147-352 (426)
142 COG4671 Predicted glycosyl tra 96.5 1.2 2.5E-05 52.4 25.4 134 962-1115 220-360 (400)
143 KOG1050 Trehalose-6-phosphate 96.4 0.18 3.9E-06 64.4 20.4 260 816-1115 129-435 (732)
144 TIGR01426 MGT glycosyltransfer 96.4 0.065 1.4E-06 63.1 15.7 126 962-1115 226-354 (392)
145 COG1817 Uncharacterized protei 96.3 0.52 1.1E-05 54.3 21.5 285 729-1115 13-310 (346)
146 COG4641 Uncharacterized protei 96.2 0.28 6.2E-06 57.6 19.3 318 725-1195 13-361 (373)
147 COG3660 Predicted nucleoside-d 95.6 2.3 5.1E-05 48.2 22.0 199 830-1076 69-276 (329)
148 PF12000 Glyco_trans_4_3: Gkyc 95.6 0.097 2.1E-06 55.8 10.8 89 822-923 57-170 (171)
149 PLN02784 alpha-amylase 95.5 0.034 7.4E-07 71.1 8.3 70 467-542 306-393 (894)
150 PF06258 Mito_fiss_Elm1: Mitoc 95.0 1.8 3.9E-05 50.4 19.9 197 830-1075 56-259 (311)
151 PRK14089 ipid-A-disaccharide s 94.7 1.1 2.5E-05 52.8 17.5 179 830-1070 75-259 (347)
152 cd02859 AMPKbeta_GBD_like AMP- 94.7 0.13 2.7E-06 47.9 7.7 54 452-520 3-56 (79)
153 PF11997 DUF3492: Domain of un 94.6 0.6 1.3E-05 53.2 14.3 42 710-752 1-42 (268)
154 COG3980 spsG Spore coat polysa 94.2 3.4 7.5E-05 47.3 18.8 90 964-1070 161-251 (318)
155 cd02859 AMPKbeta_GBD_like AMP- 94.1 0.18 4E-06 46.8 7.3 59 277-350 3-61 (79)
156 TIGR02195 heptsyl_trn_II lipop 93.0 0.79 1.7E-05 53.0 11.8 113 948-1071 161-276 (334)
157 PLN02784 alpha-amylase 92.0 1.7 3.7E-05 56.3 13.7 92 264-361 283-393 (894)
158 cd02861 E_set_proteins_like E 90.6 0.9 1.9E-05 42.3 7.2 53 452-517 3-55 (82)
159 cd02861 E_set_proteins_like E 90.5 0.64 1.4E-05 43.2 6.1 46 291-343 12-57 (82)
160 PRK02797 4-alpha-L-fucosyltran 88.7 13 0.00028 43.4 15.8 117 963-1082 146-268 (322)
161 TIGR03609 S_layer_CsaB polysac 88.2 41 0.00089 38.3 19.7 100 962-1071 172-275 (298)
162 PRK10422 lipopolysaccharide co 87.8 7.2 0.00016 45.7 13.6 103 961-1071 183-287 (352)
163 PLN02950 4-alpha-glucanotransf 87.5 7 0.00015 51.8 14.5 83 449-538 149-236 (909)
164 cd03789 GT1_LPS_heptosyltransf 87.4 4.3 9.4E-05 45.7 11.1 98 964-1071 124-223 (279)
165 PLN02448 UDP-glycosyltransfera 87.1 18 0.00038 44.4 16.9 95 961-1074 274-370 (459)
166 PRK10916 ADP-heptose:LPS hepto 86.2 8.1 0.00018 45.1 12.8 115 949-1071 168-286 (348)
167 TIGR02201 heptsyl_trn_III lipo 85.7 9.8 0.00021 44.2 13.2 102 962-1071 182-285 (344)
168 PF04464 Glyphos_transf: CDP-G 85.5 48 0.001 38.9 18.9 177 859-1071 98-294 (369)
169 PF06925 MGDG_synth: Monogalac 85.4 2.4 5.2E-05 44.5 7.3 86 816-912 76-163 (169)
170 PF01075 Glyco_transf_9: Glyco 85.2 6.4 0.00014 43.2 10.8 102 961-1071 105-208 (247)
171 PLN02210 UDP-glucosyl transfer 85.1 18 0.0004 44.3 15.6 134 961-1115 269-410 (456)
172 PLN02863 UDP-glucoronosyl/UDP- 84.5 33 0.00073 42.4 17.5 42 706-753 6-47 (477)
173 PF10087 DUF2325: Uncharacteri 83.9 2.7 5.9E-05 40.4 6.3 81 994-1080 2-90 (97)
174 PLN02950 4-alpha-glucanotransf 83.7 48 0.001 44.3 19.3 271 448-753 4-306 (909)
175 PLN03007 UDP-glucosyltransfera 83.7 33 0.00072 42.3 17.1 98 961-1073 285-391 (482)
176 TIGR02193 heptsyl_trn_I lipopo 82.5 13 0.00029 42.5 12.4 99 961-1071 179-279 (319)
177 COG0859 RfaF ADP-heptose:LPS h 82.2 7.9 0.00017 45.2 10.5 97 962-1070 176-275 (334)
178 PF04101 Glyco_tran_28_C: Glyc 80.6 2.4 5.1E-05 44.0 4.9 48 1022-1075 55-102 (167)
179 PLN02554 UDP-glycosyltransfera 80.4 41 0.00089 41.6 16.2 38 709-752 2-41 (481)
180 PLN02207 UDP-glycosyltransfera 80.4 45 0.00097 41.3 16.4 110 951-1073 265-378 (468)
181 PLN02167 UDP-glycosyltransfera 80.3 46 0.001 41.1 16.6 105 951-1073 270-386 (475)
182 PF12038 DUF3524: Domain of un 79.4 6.9 0.00015 41.7 7.8 64 831-900 59-136 (168)
183 PF07429 Glyco_transf_56: 4-al 78.3 1.6E+02 0.0034 35.3 22.8 116 963-1081 185-305 (360)
184 PLN03004 UDP-glycosyltransfera 77.3 43 0.00094 41.2 14.9 80 1022-1115 334-419 (451)
185 PLN02562 UDP-glycosyltransfera 75.9 81 0.0018 38.7 16.8 131 961-1115 273-408 (448)
186 PRK10964 ADP-heptose:LPS hepto 75.2 14 0.00031 42.5 9.7 96 964-1071 181-278 (322)
187 PLN02410 UDP-glucoronosyl/UDP- 73.7 78 0.0017 39.0 15.8 41 707-753 5-45 (451)
188 PTZ00121 MAEBL; Provisional 72.4 11 0.00024 50.9 8.4 15 53-67 953-967 (2084)
189 PF11440 AGT: DNA alpha-glucos 69.8 2.3E+02 0.0049 33.2 26.3 308 727-1117 2-350 (355)
190 PLN02208 glycosyltransferase f 69.7 1.4E+02 0.003 36.8 16.7 40 707-752 2-41 (442)
191 PLN02670 transferase, transfer 68.6 1.6E+02 0.0035 36.6 17.0 39 708-752 5-43 (472)
192 cd02858 Esterase_N_term Estera 68.2 20 0.00043 33.7 7.2 58 274-343 4-62 (85)
193 PLN02555 limonoid glucosyltran 68.2 1.4E+02 0.0031 37.0 16.5 39 709-753 7-45 (480)
194 cd05808 CBM20_alpha_amylase Al 67.9 11 0.00023 35.8 5.4 64 466-537 13-81 (95)
195 PLN00164 glucosyltransferase; 67.8 1.8E+02 0.0038 36.2 17.2 38 709-752 3-44 (480)
196 PF02951 GSH-S_N: Prokaryotic 67.8 5.5 0.00012 40.3 3.5 40 710-752 1-40 (119)
197 PLN02173 UDP-glucosyl transfer 67.1 1.4E+02 0.003 36.9 16.0 48 1021-1073 316-363 (449)
198 PLN03086 PRLI-interacting fact 66.5 30 0.00065 43.6 10.2 12 609-620 216-227 (567)
199 KOG3986 Protein phosphatase, r 64.2 11 0.00023 47.0 5.8 73 292-364 391-475 (526)
200 cd05809 CBM20_beta_amylase Bet 63.0 24 0.00051 34.2 6.8 85 452-543 2-91 (99)
201 KOG1144 Translation initiation 62.8 25 0.00054 45.1 8.4 27 726-752 575-601 (1064)
202 KOG3986 Protein phosphatase, r 62.0 14 0.00031 45.9 6.3 75 467-542 391-472 (526)
203 cd05807 CBM20_CGTase CGTase, C 62.0 32 0.00069 33.3 7.5 85 452-542 2-91 (101)
204 KOG3654 Uncharacterized CH dom 60.9 38 0.00083 41.4 9.2 14 230-243 201-214 (708)
205 PRK13398 3-deoxy-7-phosphohept 60.3 90 0.002 35.8 11.9 104 963-1073 27-142 (266)
206 PLN02534 UDP-glycosyltransfera 60.0 2.9E+02 0.0064 34.5 17.1 110 953-1073 275-390 (491)
207 PF05159 Capsule_synth: Capsul 58.7 70 0.0015 36.0 10.7 98 961-1071 116-224 (269)
208 PF01975 SurE: Survival protei 58.3 14 0.00031 40.4 4.8 38 710-754 1-38 (196)
209 PF07046 CRA_rpt: Cytoplasmic 57.7 32 0.0007 28.4 5.4 6 376-381 4-9 (42)
210 PRK04020 rps2P 30S ribosomal p 57.3 51 0.0011 36.5 8.8 103 973-1080 48-153 (204)
211 PF00201 UDPGT: UDP-glucoronos 57.1 90 0.0019 38.2 12.1 123 961-1115 276-404 (500)
212 PF04230 PS_pyruv_trans: Polys 57.0 2.8E+02 0.006 29.8 17.5 93 974-1072 189-283 (286)
213 PF00205 TPP_enzyme_M: Thiamin 56.9 26 0.00057 35.3 6.2 57 991-1047 12-83 (137)
214 PLN02992 coniferyl-alcohol glu 56.9 2.3E+02 0.005 35.3 15.4 79 1023-1115 339-422 (481)
215 PLN02152 indole-3-acetate beta 56.6 2.8E+02 0.0061 34.3 16.0 111 951-1073 251-373 (455)
216 cd02858 Esterase_N_term Estera 56.0 56 0.0012 30.7 7.8 56 449-517 4-60 (85)
217 PF02922 CBM_48: Carbohydrate- 54.8 25 0.00054 32.3 5.3 49 465-518 20-71 (85)
218 PF08288 PIGA: PIGA (GPI ancho 54.7 51 0.0011 32.0 7.2 38 830-871 49-86 (90)
219 PF01113 DapB_N: Dihydrodipico 53.9 22 0.00047 35.7 5.1 46 1035-1080 61-106 (124)
220 KOG1029 Endocytic adaptor prot 53.4 44 0.00096 42.9 8.3 24 239-262 245-268 (1118)
221 KOG4661 Hsp27-ERE-TATA-binding 53.4 38 0.00082 42.0 7.6 17 619-635 789-805 (940)
222 PF03033 Glyco_transf_28: Glyc 53.3 17 0.00037 36.0 4.2 28 725-752 8-35 (139)
223 cd05808 CBM20_alpha_amylase Al 52.3 35 0.00076 32.2 5.9 59 293-354 15-79 (95)
224 PF03016 Exostosin: Exostosin 51.9 19 0.00041 40.6 4.8 69 1034-1115 229-300 (302)
225 PF02922 CBM_48: Carbohydrate- 51.4 33 0.00072 31.5 5.5 50 290-342 20-72 (85)
226 cd05816 CBM20_DPE2_repeat2 Dis 50.3 52 0.0011 31.8 6.8 72 463-542 10-86 (99)
227 KOG0163 Myosin class VI heavy 50.2 45 0.00097 42.8 7.7 12 629-640 1147-1158(1259)
228 PRK13397 3-deoxy-7-phosphohept 49.8 1.2E+02 0.0025 34.8 10.4 92 976-1073 27-130 (250)
229 PF07946 DUF1682: Protein of u 49.6 55 0.0012 38.5 8.2 27 377-403 264-290 (321)
230 KOG4626 O-linked N-acetylgluco 49.6 44 0.00096 42.3 7.4 115 951-1072 749-865 (966)
231 KOG1144 Translation initiation 49.4 41 0.00089 43.3 7.2 16 1004-1019 884-899 (1064)
232 PF10933 DUF2827: Protein of u 49.4 2.8E+02 0.006 33.5 13.6 125 969-1115 197-324 (364)
233 PF00686 CBM_20: Starch bindin 49.0 73 0.0016 30.4 7.5 84 453-543 2-90 (96)
234 PF02903 Alpha-amylase_N: Alph 48.7 42 0.00092 33.4 6.1 65 448-517 18-85 (120)
235 COG1703 ArgK Putative periplas 47.4 1.3E+02 0.0028 35.4 10.3 26 727-752 63-88 (323)
236 PLN02764 glycosyltransferase f 47.1 5.4E+02 0.012 31.9 16.4 41 707-753 3-43 (453)
237 TIGR01426 MGT glycosyltransfer 46.2 68 0.0015 37.9 8.4 21 732-752 12-32 (392)
238 cd05811 CBM20_glucoamylase Glu 43.9 1.1E+02 0.0024 29.6 8.1 86 451-542 5-94 (106)
239 PF00686 CBM_20: Starch bindin 43.0 1.3E+02 0.0029 28.6 8.4 71 289-362 12-90 (96)
240 KOG4722 Zn-finger protein [Gen 42.8 92 0.002 37.5 8.3 47 375-421 401-447 (672)
241 TIGR00959 ffh signal recogniti 42.1 7.1E+02 0.015 30.7 16.2 125 978-1115 169-307 (428)
242 cd00917 PG-PI_TP The phosphati 41.7 1.3E+02 0.0029 30.1 8.5 80 264-343 16-110 (122)
243 PF12158 DUF3592: Protein of u 41.4 29 0.00062 35.1 3.7 26 605-635 88-113 (148)
244 PTZ00266 NIMA-related protein 40.8 1.3E+02 0.0028 40.9 10.2 12 1097-1108 994-1005(1021)
245 COG0296 GlgB 1,4-alpha-glucan 40.6 46 0.00099 42.6 6.0 51 465-521 45-96 (628)
246 PF10959 DUF2761: Protein of u 40.5 45 0.00098 31.4 4.4 64 259-345 2-71 (95)
247 PF03358 FMN_red: NADPH-depend 40.3 48 0.001 33.7 5.2 40 710-752 1-40 (152)
248 PF08660 Alg14: Oligosaccharid 39.7 4.7E+02 0.01 28.0 12.6 66 830-898 91-161 (170)
249 PF04696 Pinin_SDK_memA: pinin 39.7 2.1E+02 0.0046 29.5 9.6 20 374-393 34-53 (131)
250 TIGR01012 Sa_S2_E_A ribosomal 39.1 1.5E+02 0.0032 32.8 8.8 101 975-1080 44-147 (196)
251 KOG0780 Signal recognition par 39.1 6.6E+02 0.014 30.9 14.5 137 965-1115 157-308 (483)
252 cd02857 CD_pullulan_degrading_ 38.6 1.5E+02 0.0034 28.5 8.2 62 451-518 16-78 (116)
253 cd01425 RPS2 Ribosomal protein 38.3 2.1E+02 0.0045 31.2 9.9 92 985-1080 50-166 (193)
254 PF03401 TctC: Tripartite tric 38.1 6.6E+02 0.014 28.7 15.1 160 962-1177 78-245 (274)
255 PF03808 Glyco_tran_WecB: Glyc 37.8 1.6E+02 0.0036 31.2 8.9 99 975-1082 32-142 (172)
256 PRK09510 tolA cell envelope in 37.5 1.3E+02 0.0027 36.6 8.6 9 816-824 351-359 (387)
257 PRK13396 3-deoxy-7-phosphohept 36.7 3.4E+02 0.0073 32.7 12.0 104 961-1072 99-215 (352)
258 PTZ00254 40S ribosomal protein 36.1 96 0.0021 35.4 7.0 103 973-1080 51-157 (249)
259 cd05810 CBM20_alpha_MTH Glucan 35.9 1.3E+02 0.0027 29.2 7.0 54 302-358 28-87 (97)
260 PF03714 PUD: Bacterial pullan 35.7 1.5E+02 0.0032 28.9 7.5 74 276-360 2-81 (103)
261 PRK00247 putative inner membra 35.7 1.7E+02 0.0038 35.9 9.6 8 43-50 31-38 (429)
262 PLN02256 arogenate dehydrogena 35.5 45 0.00098 38.9 4.5 54 688-752 15-68 (304)
263 cd05809 CBM20_beta_amylase Bet 35.4 1.1E+02 0.0024 29.5 6.5 63 293-356 18-87 (99)
264 KOG2357 Uncharacterized conser 35.4 1E+02 0.0022 37.3 7.3 17 323-341 314-330 (440)
265 cd05810 CBM20_alpha_MTH Glucan 34.3 1.5E+02 0.0034 28.6 7.3 72 464-543 12-89 (97)
266 TIGR01380 glut_syn glutathione 34.2 35 0.00076 39.7 3.4 40 710-752 1-40 (312)
267 PRK06249 2-dehydropantoate 2-r 34.1 52 0.0011 38.1 4.8 35 707-752 3-37 (313)
268 KOG1029 Endocytic adaptor prot 33.6 1.5E+02 0.0032 38.6 8.5 24 400-423 387-410 (1118)
269 cd02854 Glycogen_branching_enz 32.8 79 0.0017 30.8 5.1 35 290-328 14-48 (99)
270 PF00072 Response_reg: Respons 32.4 2.5E+02 0.0054 26.1 8.4 106 995-1115 2-112 (112)
271 TIGR01915 npdG NADPH-dependent 32.3 54 0.0012 36.0 4.3 32 710-751 1-32 (219)
272 PF02731 SKIP_SNW: SKIP/SNW do 32.2 1.5E+02 0.0033 31.6 7.3 14 345-360 75-88 (158)
273 PRK05299 rpsB 30S ribosomal pr 32.2 3.9E+02 0.0085 30.7 11.2 39 1041-1080 157-196 (258)
274 COG0569 TrkA K+ transport syst 31.9 48 0.001 36.9 3.8 26 727-752 7-32 (225)
275 cd03146 GAT1_Peptidase_E Type 31.7 4.8E+02 0.01 28.6 11.6 107 965-1075 3-124 (212)
276 cd03145 GAT1_cyanophycinase Ty 31.3 4.7E+02 0.01 28.9 11.4 111 964-1077 2-129 (217)
277 PRK05647 purN phosphoribosylgl 31.2 1.9E+02 0.0041 31.8 8.2 34 710-752 2-37 (200)
278 cd03129 GAT1_Peptidase_E_like 30.8 4.5E+02 0.0098 28.6 11.1 106 969-1077 7-126 (210)
279 TIGR00639 PurN phosphoribosylg 30.7 2.8E+02 0.006 30.3 9.3 34 710-752 1-36 (190)
280 KOG2412 Nuclear-export-signal 30.6 1.4E+02 0.0031 37.3 7.6 18 376-393 214-231 (591)
281 PF07046 CRA_rpt: Cytoplasmic 30.1 1.6E+02 0.0034 24.6 5.3 17 389-405 3-19 (42)
282 TIGR00696 wecB_tagA_cpsF bacte 29.9 1.6E+02 0.0034 31.8 7.2 99 976-1082 33-141 (177)
283 PRK13934 stationary phase surv 29.4 3.6E+02 0.0077 31.3 10.2 37 710-754 1-37 (266)
284 KOG2891 Surface glycoprotein [ 29.0 1.7E+02 0.0036 33.7 7.3 28 375-402 331-358 (445)
285 TIGR01361 DAHP_synth_Bsub phos 28.6 2.7E+02 0.006 31.8 9.2 102 965-1073 27-140 (260)
286 KOG4680 Uncharacterized conser 28.5 60 0.0013 33.8 3.5 75 265-340 43-127 (153)
287 cd05820 CBM20_novamyl Novamyl 28.2 2E+02 0.0043 28.1 7.0 71 465-539 16-90 (103)
288 PLN03086 PRLI-interacting fact 28.2 2.7E+02 0.0058 35.6 9.6 15 377-391 6-20 (567)
289 PRK12595 bifunctional 3-deoxy- 27.8 3.7E+02 0.0081 32.3 10.5 91 977-1073 131-233 (360)
290 PRK09271 flavodoxin; Provision 27.7 94 0.002 32.5 5.0 36 710-750 1-36 (160)
291 PTZ00266 NIMA-related protein 27.5 2.5E+02 0.0054 38.3 9.7 10 652-661 651-660 (1021)
292 PF03714 PUD: Bacterial pullan 27.4 2.4E+02 0.0052 27.5 7.4 76 451-542 2-82 (103)
293 cd05815 CBM20_DPE2_repeat1 Dis 27.2 2.3E+02 0.005 27.3 7.2 61 266-341 4-66 (101)
294 KOG2412 Nuclear-export-signal 26.9 1.6E+02 0.0036 36.8 7.3 17 372-388 218-234 (591)
295 PF07279 DUF1442: Protein of u 26.9 1.8E+02 0.0039 32.7 7.0 80 989-1072 67-149 (218)
296 KOG0163 Myosin class VI heavy 26.8 3.4E+02 0.0074 35.4 10.0 15 40-54 513-527 (1259)
297 cd05817 CBM20_DSP Dual-specifi 26.8 5.2E+02 0.011 24.9 9.6 68 465-540 11-83 (100)
298 cd05817 CBM20_DSP Dual-specifi 26.7 2.1E+02 0.0045 27.7 6.8 77 266-361 4-85 (100)
299 PF04413 Glycos_transf_N: 3-De 26.6 4.9E+02 0.011 28.2 10.3 85 821-916 87-179 (186)
300 cd02854 Glycogen_branching_enz 26.5 1.1E+02 0.0023 29.9 4.8 35 465-505 14-48 (99)
301 PRK12311 rpsB 30S ribosomal pr 26.4 5.7E+02 0.012 30.5 11.5 38 1042-1080 153-191 (326)
302 PF10727 Rossmann-like: Rossma 25.8 28 0.00061 35.6 0.6 36 706-752 7-42 (127)
303 cd06533 Glyco_transf_WecG_TagA 25.4 4.1E+02 0.0088 28.3 9.3 98 975-1081 30-139 (171)
304 COG2102 Predicted ATPases of P 25.1 2.9E+02 0.0063 31.2 8.2 88 962-1055 60-149 (223)
305 cd05467 CBM20 The family 20 ca 25.0 2.3E+02 0.0051 26.5 6.7 67 465-536 11-82 (96)
306 PRK05246 glutathione synthetas 24.9 61 0.0013 37.7 3.3 40 710-752 2-41 (316)
307 cd05807 CBM20_CGTase CGTase, C 24.8 2.5E+02 0.0054 27.1 7.0 36 321-356 50-88 (101)
308 PRK14619 NAD(P)H-dependent gly 24.7 1E+02 0.0023 35.6 5.1 34 708-752 3-36 (308)
309 COG1995 PdxA Pyridoxal phospha 24.5 4.2E+02 0.009 31.6 9.7 138 932-1115 174-320 (332)
310 cd01078 NAD_bind_H4MPT_DH NADP 24.0 8.9E+02 0.019 25.8 11.8 60 986-1050 47-106 (194)
311 PRK06027 purU formyltetrahydro 24.0 3.1E+02 0.0068 31.8 8.7 137 693-890 78-220 (286)
312 PF01012 ETF: Electron transfe 23.7 2.7E+02 0.0059 28.9 7.6 90 979-1073 19-122 (164)
313 COG0296 GlgB 1,4-alpha-glucan 23.6 1.2E+02 0.0025 39.1 5.5 50 290-344 45-96 (628)
314 cd05813 CBM20_genethonin_1 Gen 23.6 2.3E+02 0.0049 27.0 6.4 60 465-532 13-75 (95)
315 COG0052 RpsB Ribosomal protein 23.6 5.3E+02 0.011 29.7 10.0 37 1042-1080 157-195 (252)
316 cd05816 CBM20_DPE2_repeat2 Dis 23.5 2.1E+02 0.0045 27.6 6.1 53 302-359 27-84 (99)
317 PRK10867 signal recognition pa 23.5 1.5E+03 0.032 28.1 18.3 127 977-1115 169-308 (433)
318 PRK01906 tetraacyldisaccharide 23.3 3E+02 0.0064 32.9 8.5 42 709-755 55-98 (338)
319 cd05467 CBM20 The family 20 ca 23.2 3.9E+02 0.0084 25.0 7.9 53 303-359 27-84 (96)
320 cd05811 CBM20_glucoamylase Glu 23.1 1.7E+02 0.0036 28.4 5.4 80 277-361 6-94 (106)
321 PF06564 YhjQ: YhjQ protein; 23.1 1.2E+02 0.0026 34.5 5.0 35 710-750 1-37 (243)
322 PLN02166 dTDP-glucose 4,6-dehy 23.0 90 0.002 38.1 4.3 36 706-751 117-152 (436)
323 KOG3925 Uncharacterized conser 22.9 1.6E+02 0.0035 35.1 6.0 115 599-741 206-324 (371)
324 COG0233 Frr Ribosome recycling 22.9 2.9E+02 0.0063 30.4 7.5 76 349-434 94-171 (187)
325 PRK04155 chaperone protein Hch 22.8 1.9E+02 0.0042 33.6 6.7 54 693-752 39-99 (287)
326 PLN02208 glycosyltransferase f 22.8 1.4E+02 0.003 36.7 5.9 45 1023-1073 312-357 (442)
327 COG2894 MinD Septum formation 22.7 1E+03 0.023 27.3 11.8 36 711-752 3-40 (272)
328 PRK12921 2-dehydropantoate 2-r 22.5 86 0.0019 35.7 3.8 31 710-751 1-31 (305)
329 PRK08273 thiamine pyrophosphat 22.4 2.5E+02 0.0054 35.7 8.2 67 980-1047 198-278 (597)
330 cd05565 PTS_IIB_lactose PTS_II 22.3 3.3E+02 0.0071 26.8 7.2 37 710-752 1-37 (99)
331 PRK03692 putative UDP-N-acetyl 22.2 2.3E+02 0.0049 32.2 7.0 98 976-1081 90-197 (243)
332 cd02857 CD_pullulan_degrading_ 22.2 3.7E+02 0.008 25.9 7.7 61 276-341 16-78 (116)
333 TIGR01425 SRP54_euk signal rec 22.1 1.6E+03 0.034 27.9 17.8 111 977-1087 168-288 (429)
334 PRK05380 pyrG CTP synthetase; 21.9 1.7E+03 0.038 28.4 22.2 38 710-750 2-39 (533)
335 PLN00414 glycosyltransferase f 21.9 1.6E+03 0.034 27.8 17.3 38 709-752 4-41 (446)
336 PF06364 DUF1068: Protein of u 21.9 7.8E+02 0.017 26.8 10.1 27 408-434 137-163 (176)
337 KOG2357 Uncharacterized conser 21.8 2.2E+02 0.0048 34.6 6.9 44 228-273 177-220 (440)
338 TIGR00460 fmt methionyl-tRNA f 21.5 4.4E+02 0.0096 30.8 9.4 122 710-891 1-134 (313)
339 PF07828 PA-IL: PA-IL-like pro 21.5 77 0.0017 32.1 2.7 27 333-360 91-117 (121)
340 PRK06522 2-dehydropantoate 2-r 21.4 1E+02 0.0022 34.9 4.1 32 710-752 1-32 (304)
341 cd05818 CBM20_water_dikinase P 21.2 2.5E+02 0.0054 26.9 6.1 36 323-360 43-81 (92)
342 PF15437 PGBA_C: Plasminogen-b 21.2 4.1E+02 0.0088 25.6 7.1 33 389-421 46-78 (86)
343 KOG2072 Translation initiation 21.2 4.3E+02 0.0093 35.0 9.5 17 395-411 810-826 (988)
344 PRK06719 precorrin-2 dehydroge 21.2 1.1E+02 0.0025 32.1 4.1 32 710-752 14-45 (157)
345 TIGR01011 rpsB_bact ribosomal 21.1 1.1E+03 0.023 26.5 11.9 38 1042-1080 156-194 (225)
346 COG2910 Putative NADH-flavin r 20.9 1.1E+02 0.0023 33.8 3.8 33 710-752 1-33 (211)
347 PF11806 DUF3327: Domain of un 20.9 4.4E+02 0.0096 26.8 8.1 65 452-520 3-67 (122)
348 PRK01909 pdxA 4-hydroxythreoni 20.5 3.6E+02 0.0077 32.2 8.3 59 932-994 171-238 (329)
349 PRK09510 tolA cell envelope in 20.3 4.5E+02 0.0097 32.1 9.2 14 725-738 346-359 (387)
350 PRK08305 spoVFB dipicolinate s 20.2 1.7E+02 0.0037 32.3 5.3 36 709-752 5-42 (196)
351 PLN02573 pyruvate decarboxylas 20.2 3.2E+02 0.007 34.7 8.5 24 729-752 16-39 (578)
352 COG0111 SerA Phosphoglycerate 20.2 3.2E+02 0.007 32.3 7.9 47 1033-1079 189-240 (324)
353 PF02826 2-Hacid_dh_C: D-isome 20.1 3.8E+02 0.0083 28.4 7.9 42 1035-1076 85-131 (178)
354 PLN02778 3,5-epimerase/4-reduc 20.1 1.3E+02 0.0028 34.5 4.6 33 706-748 6-38 (298)
No 1
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.1e-223 Score=2057.22 Aligned_cols=1034 Identities=76% Similarity=1.252 Sum_probs=975.6
Q ss_pred cccCCCCCCCCCCccccCCCCCCccceeccccCCCCCCCccccccccCCCCCCCCCCCCCCCCcceeccccccccccccc
Q 046057 69 VSTPRTKDTGSKGFTPKTPVGTGIQKRDQKKNGDKEGSGTPVSGEYGGPTKKTPAPTNGVEKKPAVELSRDNQIGEQNVD 148 (1198)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (1198)
||+++|||++|+||.|++|+| |+|||++++++|+++++|++++.+++.++|++.++.+.+ ++++.+.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------ 69 (1036)
T PLN02316 1 MSTSKPKGSAPRGFAPRTTVE-SSQKRIQQNNGDKEDSSTSTSSLSVSAVEKTSNAKEEIQ----VDFQHNSES------ 69 (1036)
T ss_pred CCCCCCCCCCCCCcCCCCCcc-chhhhhhhccCccCCccCccccccccccccCccccccce----ecccccccc------
Confidence 689999999999999999999 999999999999999999999999999999998855544 322221100
Q ss_pred ccccccccCCCCccccccccccccccCCCcccccccccccccCCCCCcccccccccccccccccccCCcccccchhhhhh
Q 046057 149 ITEQESENIPRTNKDLISAKSSQVVGNGSVGRIDDVFQKKETTPKSDIKNVTEKSTSKRKHLNLNKSNDSVRDESIKADI 228 (1198)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (1198)
+.+..+.+++++.+..+.++++++.+++++++.+|+
T Consensus 70 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (1036)
T PLN02316 70 --------------------------------------------AVEEVEAEDEIEVEQNQSDVLKSSSIVKEESISTDM 105 (1036)
T ss_pred --------------------------------------------cccccccchhhhhhhccccccccccccccccccccc
Confidence 233355666677777888999999999999999999
Q ss_pred hhhHHHHHh--hhHHHHHHHHHHHHHHHhhcccCCCCcEEEecccCCCCCeEEEEEcccCCCCCCCCcEEEEeecCCccc
Q 046057 229 KASEDASLK--LKKEVEENLRKQEIERLADENFLRQKKIFVYPQVVKPDQDIEVFLNRSLSTLKNEPDVLIMGAFNDWRW 306 (1198)
Q Consensus 229 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~P~~~~aG~~v~v~yN~~l~~L~~~~~v~ih~GfN~W~~ 306 (1198)
+.+.|.|+. ||++|| ++++|+||+||++|||+|+++||+|+.++||++|+||||+++++|+++++|+||+|||+|++
T Consensus 106 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~f~~P~~~~a~~~~~v~~n~~~~~L~~~~~v~i~~gfN~W~~ 184 (1036)
T PLN02316 106 DGIDDDSLDRKLKLERE-NLRKREIEELAEENFSRGNKLFVYPQVVKPDSDIEVYLNRSLSTLANEPDVLIMGAFNGWRW 184 (1036)
T ss_pred cccchHHHHHHhhhhHH-HHHHHHHHHHHhhccCCCCeEEeccccccCCCeeEEEEcCCCCccCCCCceEEEeccccccc
Confidence 999997765 556655 67999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceecccccCCCCeEEEEEEecCCceeEeEEEEcCCcccccCCCCceEEEEcCCccHHHHHHhHHHHHHHHHHHHHHH
Q 046057 307 KSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQNIYENNDQKDFCIAVEGLMDALAFEDFLLEEKRREQEKLAKE 386 (1198)
Q Consensus 307 ~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg~~~wDNN~g~d~~~~V~~g~~~~~~~~~~~ee~r~~~e~la~e 386 (1198)
.+|+.+|.++++++|||+|+|+||++||+|||||+||+++||||+++||+++|++++++++|++||+||||+|+++||+|
T Consensus 185 ~~f~~~~~k~~~~g~ww~~~v~Vp~~A~~ldfVf~~g~~~yDNN~~~Df~~~V~~~~~~~~~~~~l~ee~~~e~~~la~e 264 (1036)
T PLN02316 185 KSFTERLEKTELGGDWWSCKLHIPKEAYKMDFVFFNGQNVYDNNDHKDFCVEIEGGMDEHSFEDFLLEEKRRELEKLAKE 264 (1036)
T ss_pred cccceeccccccCCCeEEEEEecCccceEEEEEEeCCccccccCCCCceEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEecCCCCCCCcEEEEEEeCCCCCCCC
Q 046057 387 KAEQERQEEERRRIEAEHAAIEADRAQARVETERKREMLRELKKKAARSVDNVWYIEPSEFKGEDLVRLYYNKQSSSLAH 466 (1198)
Q Consensus 387 ~aer~~~~~e~rr~~~~~aa~~a~~a~A~~~~~~~~~~~~~~~~~a~~~~~~v~~~~P~~~~aG~~V~v~YN~~~g~L~g 466 (1198)
+|||++++||+||++++|||++|+++|||++++++|++|++++|+++++++|+|||+|+.++||++|+|||||++|+|+|
T Consensus 265 ~ae~~~~~ee~~r~~~~kaa~~a~~a~akae~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~aG~~v~lyYN~~~~~L~~ 344 (1036)
T PLN02316 265 EAERERQAEEQRRREEEKAAMEADRAQAKAEVEKRREKLQNLLKKASRSADNVWYIEPSEFKAGDTVKLYYNRSSGPLAH 344 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHhhhhhcccceEEecCCCcCCCCEEEEEECCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecCCCCCCccccCCCCcceEEEecCCCCc
Q 046057 467 AKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAIVYDNNSRQDFHAIVPKSIPD 546 (1198)
Q Consensus 467 a~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~~~~~~~~wDNN~g~dyh~~V~~~~~~ 546 (1198)
+++||||||||||+|+.+++++|+++...+|+||+|+|.||.+|++|||||+||+|+++++||||+|+|||++|++++++
T Consensus 345 ~~~v~i~gg~N~W~~~~~~~~~~~~~~~~~g~ww~a~v~vP~~A~~mDfVFsdg~~~~~~~yDNn~~~Dyh~~v~~~~~~ 424 (1036)
T PLN02316 345 STEIWIHGGYNNWIDGLSIVEKLVKSEEKDGDWWYAEVVVPERALVLDWVFADGPPGNARNYDNNGRQDFHAIVPNNIPE 424 (1036)
T ss_pred CCcEEEEEeEcCCCCCCcccceeecccCCCCCEEEEEEecCCCceEEEEEEecCCcccccccccCCCcceeeecCCCCch
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhcccceEEecCCCCcCCCceEEEEEcCCCCCC
Q 046057 547 ELYWVEEERQTFRKLQEERRLKEEAARAKAEKTAHMKAETKERTLKRFLLSQKHIVYTDPLDVQAGTTVTVFYNPANTVL 626 (1198)
Q Consensus 547 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~y~~~~~~~ 626 (1198)
|+||+++++++|++||+||++||+++|+|+||||+||||+|++++++||++|+|||||+|.+|+||++|||||||+||+|
T Consensus 425 ~~~~~~~~~~~~~~l~~~~~~~~~~~r~k~~~~a~~~ae~k~~~~~~~l~~~~~~~~teP~~~~aG~~v~v~Yn~~~t~l 504 (1036)
T PLN02316 425 ELYWVEEEHQIYRKLQEERRLREEAIRAKAEKTARMKAEMKEKTLKMFLLSQKHIVYTEPLEVQAGTTVTVLYNPANTVL 504 (1036)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccceEEEecCCCCCCCCEEEEEECCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeEEecccccccccCCCCCCcceeecCCcceeEEEeecCCCcccccccccccCCCCccCCCCCCccCCCccCCCCC
Q 046057 627 NGKSEIWFRCSFNHWTHRMGILPPQKMVPVKYSTHVKTTVKVPLDAYTMDFVFSEWEDGGTFDNKNGMDYHIPVFGGVVK 706 (1198)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~vfs~~~~~~~~d~~~~~~~h~~~~g~~~~ 706 (1198)
+|++|||++||||||+|..|++||++|+|+++|+|++|||+||.||||||||||+.++|++|||++++|||+|+.|+...
T Consensus 505 ~~~~ev~~~g~~NrWth~~~~~~~~~m~~~~~g~~~~a~v~vP~da~~mdfvFs~~~~g~~yDn~~~~dyh~~v~g~~~~ 584 (1036)
T PLN02316 505 NGKPEVWFRGSFNRWTHRLGPLPPQKMVPADNGSHLKATVKVPLDAYMMDFVFSEKEEGGIFDNRNGLDYHIPVFGGIAK 584 (1036)
T ss_pred CCCceEEEEccccCcCCCCCCCCceeeeecCCCceEEEEEEccccceEEEEEEecCCCCCCcCCCCCcCCcccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecC
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEG 786 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~G 786 (1198)
++||||+||++|++|++++|||+++|.+|+++|+++||+|.||+|.|+++.......+.....+.+++..++++.+.++|
T Consensus 585 ~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G 664 (1036)
T PLN02316 585 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEG 664 (1036)
T ss_pred CCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999987655444444434556777788999999999
Q ss_pred eEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEE
Q 046057 787 LSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFT 866 (1198)
Q Consensus 787 v~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~t 866 (1198)
+.+|+|+++..+|.++++|++.|+..||.+||+++++++++.+++|||||||||++++++++++..|...++.++|+|+|
T Consensus 665 V~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~T 744 (1036)
T PLN02316 665 LSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFT 744 (1036)
T ss_pred cEEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEE
Confidence 99999998877999999999999999999999999999999888999999999999999999998876666778999999
Q ss_pred ecCCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHH
Q 046057 867 IHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRA 946 (1198)
Q Consensus 867 IHn~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~ 946 (1198)
||++.++.+.++.++.+||.|+|||++|++++.....+..+..|+.+|+||||++.|+|.+|.++|.+|+.+++.+||..
T Consensus 745 iHnl~~~~n~lk~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~ 824 (1036)
T PLN02316 745 IHNLEFGANHIGKAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRA 824 (1036)
T ss_pred eCCcccchhHHHHHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhh
Confidence 99999999999999999999999999999999875555666789999999999999999999999999999998899999
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEE
Q 046057 947 AKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARL 1026 (1198)
Q Consensus 947 ~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f 1026 (1198)
++..+|+++||+..+.|+|++||||+++||+++|++|+..+++++++|||+|+||++.++..|++++.+|++.++++|.|
T Consensus 825 ~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f 904 (1036)
T PLN02316 825 AKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARL 904 (1036)
T ss_pred hHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEE
Confidence 99999999999855789999999999999999999999999888999999999988888899999999999888899999
Q ss_pred EccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCC
Q 046057 1027 CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGAD 1106 (1198)
Q Consensus 1027 ~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D 1106 (1198)
++.+++.+.|.+|++||++|+||++|||||++||||+||+|||++++||++|+|.++|+++.+++..|...|||+|++.|
T Consensus 905 ~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d 984 (1036)
T PLN02316 905 CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGAD 984 (1036)
T ss_pred EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999988777777777778999999999
Q ss_pred HHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHH
Q 046057 1107 IAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPA 1186 (1198)
Q Consensus 1107 ~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A 1186 (1198)
+++|+++|. ++|..+.+.+.++.++++++|.++|||+++|
T Consensus 985 ~~aLa~AL~----------------------------------------raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A 1024 (1036)
T PLN02316 985 AAGVDYALN----------------------------------------RAISAWYDGRDWFNSLCKRVMEQDWSWNRPA 1024 (1036)
T ss_pred HHHHHHHHH----------------------------------------HHHhhhhhhHHHHHHHHHHHHHhhCCHHHHH
Confidence 999999999 9998888889999999999999999999999
Q ss_pred HHHHHHHHHHhC
Q 046057 1187 LDYMELYRAARK 1198 (1198)
Q Consensus 1187 ~~yielY~~a~K 1198 (1198)
.+|+++|++++|
T Consensus 1025 ~~Y~~LY~~a~~ 1036 (1036)
T PLN02316 1025 LDYMELYHSARK 1036 (1036)
T ss_pred HHHHHHHHHHhC
Confidence 999999999987
No 2
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.3e-73 Score=701.71 Aligned_cols=502 Identities=44% Similarity=0.739 Sum_probs=420.5
Q ss_pred ccCCCCCCcceeecCCcceeEEEeecCCCcccccccccccCCCCccCCCCCCccCCCccCCCCCCCCcEEEEEccccCCC
Q 046057 643 HRMGILPPQKMVPVKYSTHVKTTVKVPLDAYTMDFVFSEWEDGGTFDNKNGMDYHIPVFGGVVKEPPMHIVHIAVEMAPI 722 (1198)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~~vfs~~~~~~~~d~~~~~~~h~~~~g~~~~e~pMKIL~Vs~e~~P~ 722 (1198)
.+++.+--.+|.+.++...+...| -.....+..+|.+..+.. ...+...+..+..+..+++|||+|||+|++|+
T Consensus 421 l~id~~~~~~~~~~~~a~~lr~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~ 494 (977)
T PLN02939 421 LLIDGWLLEKKISNNDAKLLREMV--WKRDGRIREAYLSCKGKN----EREAVENFLKLTLSGTSSGLHIVHIAAEMAPV 494 (977)
T ss_pred HHHHHHHHhccCChhhHHHHHHHH--HhhhhhHHHHHHHHhcCc----hHHHHHHHHHhccCCCCCCCEEEEEEcccccc
Confidence 456655556777766655543333 333333344555554443 12233333445556678999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccc---cccccCCC--ceeEEeeceecCeEEEEeCCCC-
Q 046057 723 AKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGY---NRSYHWGG--TEIKVWFGKVEGLSVYFLEPQN- 796 (1198)
Q Consensus 723 akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~---~~~~~~g~--~~i~V~~~~~~Gv~v~~l~~~~- 796 (1198)
+++||+++++.+|++||+++||+|.||+|.|+++....+..+.. ...+.+++ ..+++|.+.++|+++|||+++.
T Consensus 495 aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~ 574 (977)
T PLN02939 495 AKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHP 574 (977)
T ss_pred cccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCc
Confidence 99999999999999999999999999999999887544443321 11111222 2478999999999999999754
Q ss_pred -CccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhh-
Q 046057 797 -GFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGT- 874 (1198)
Q Consensus 797 -~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~- 874 (1198)
.||+++.+||+.|+++||.+||+++++++.+.+++|||||||||++++++.+++..|...++.++|+|+||||+.|+.
T Consensus 575 ~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~ 654 (977)
T PLN02939 575 SKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGT 654 (977)
T ss_pred hhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCc
Confidence 489999999999999999999999999999988999999999999999987777767666667899999999997531
Q ss_pred ------------------------------hHHHHHHhccCEEEEeCHHHHHHHhC------CCCCCCCCCcEEEEeCCC
Q 046057 875 ------------------------------HHIGKAMTYADKATTVSHTYSKEVAG------DPAIAPHLHKFYGILNGI 918 (1198)
Q Consensus 875 ------------------------------~li~~~~~~AD~VitVS~~~a~el~~------~~~l~~~~~K~~vI~NGI 918 (1198)
|+++.++.+||.|+||||+|++++.. ++.+..+..|+++|+|||
T Consensus 655 f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGI 734 (977)
T PLN02939 655 APASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGI 734 (977)
T ss_pred CCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecce
Confidence 34567888999999999999999874 134567788999999999
Q ss_pred CCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCC--CCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEE
Q 046057 919 DQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRK--SDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVL 996 (1198)
Q Consensus 919 D~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~--~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVI 996 (1198)
|.+.|+|..|++||.+|++.++ .||..++.++|+++||+. ++.|+|++||||+++||+++|++|+..+++.+++|||
T Consensus 735 D~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVI 813 (977)
T PLN02939 735 DTDTWNPSTDRFLKVQYNANDL-QGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVL 813 (977)
T ss_pred ehhhcCCccccccccccChhhh-hhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEE
Confidence 9999999999999999999986 899999999999999984 3679999999999999999999999998877899999
Q ss_pred EecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccc
Q 046057 997 LGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGL 1076 (1198)
Q Consensus 997 vGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl 1076 (1198)
+|+||++.++..++.++.++++ .++|.|++.+++.+++.+|++||++|+||++||||+++||||+||+|||++++||+
T Consensus 814 vGdGp~~~~e~eL~~La~~l~l--~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL 891 (977)
T PLN02939 814 LGSSPVPHIQREFEGIADQFQS--NNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL 891 (977)
T ss_pred EeCCCcHHHHHHHHHHHHHcCC--CCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC
Confidence 9999877778899999999887 47899999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHH
Q 046057 1077 YDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFR 1156 (1198)
Q Consensus 1077 ~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 1156 (1198)
.|+|.++|.+.. +....|||+|++.|+++|+.+|. +
T Consensus 892 ~DtV~d~d~e~i----~~eg~NGfLf~~~D~eaLa~AL~----------------------------------------r 927 (977)
T PLN02939 892 NDSVFDFDDETI----PVELRNGFTFLTPDEQGLNSALE----------------------------------------R 927 (977)
T ss_pred cceeecCCcccc----ccCCCceEEecCCCHHHHHHHHH----------------------------------------H
Confidence 999998643321 11237999999999999999999 8
Q ss_pred HHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHh
Q 046057 1157 AISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1157 AI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~a~ 1197 (1198)
++..+.++++.|++|++++|.++|||+.++.+|+++|+.++
T Consensus 928 AL~~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 928 AFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99888889999999999999999999999999999999875
No 3
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=3.3e-65 Score=609.31 Aligned_cols=434 Identities=30% Similarity=0.541 Sum_probs=365.7
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccc--cccccccccc--cCCC--ceeEEee
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSD--VKDLGYNRSY--HWGG--TEIKVWF 781 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~--~~~l~~~~~~--~~g~--~~i~V~~ 781 (1198)
+-|||+||+.|++|++|+|||++++.+|++||+++||+|.||+|.|.++.... .........+ ..++ ....+..
T Consensus 4 ~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (489)
T PRK14098 4 RNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKV 83 (489)
T ss_pred CCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEE
Confidence 34999999999999999999999999999999999999999999999876421 1111111111 1121 1122222
Q ss_pred cee--cCeEEEEeCCCCCccccccccCC-------CCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHh
Q 046057 782 GKV--EGLSVYFLEPQNGFFSKGCVYGC-------NNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDH 852 (1198)
Q Consensus 782 ~~~--~Gv~v~~l~~~~~~f~rg~iYg~-------~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~ 852 (1198)
... .|+.+|||+++ .+|.+..+|++ .||.+||.+||++++++++..+++|||||||||++++++.+++..
T Consensus 84 ~~~~~~~v~~~~~~~~-~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~ 162 (489)
T PRK14098 84 TALPSSKIQTYFLYNE-KYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTV 162 (489)
T ss_pred ecccCCCceEEEEeCH-HHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHH
Confidence 223 36899999976 58889899975 499999999999999999988889999999999999999999876
Q ss_pred hhhc-CCCCCeEEEEecCCchh--------------------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCC--
Q 046057 853 YVHY-GLSKARIVFTIHNLEFG--------------------------THHIGKAMTYADKATTVSHTYSKEVAGDPA-- 903 (1198)
Q Consensus 853 y~~~-gl~~ipvV~tIHn~~~~--------------------------~~li~~~~~~AD~VitVS~~~a~el~~~~~-- 903 (1198)
+... .+.++|+|+||||+.++ .++++.++.+||.|+|||+++++++...+.
T Consensus 163 ~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~ 242 (489)
T PRK14098 163 YADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEA 242 (489)
T ss_pred hhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCC
Confidence 5332 23589999999997642 245677899999999999999999975211
Q ss_pred CC------CCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCC-CCCCcEEEEEecCCCccC
Q 046057 904 IA------PHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLR-KSDLPLVGIITRLTHQKG 976 (1198)
Q Consensus 904 l~------~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~-~~d~plIg~VGRL~~qKG 976 (1198)
++ .+..++.+|+||||.+.|+|..|..++.+|+..++ ++|..+|..+++++||+ .++.++|+++|||+++||
T Consensus 243 ~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG 321 (489)
T PRK14098 243 FGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQG 321 (489)
T ss_pred cChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCc
Confidence 11 13679999999999999999999999999998875 89999999999999998 347799999999999999
Q ss_pred HHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcH
Q 046057 977 IHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGL 1056 (1198)
Q Consensus 977 idlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGL 1056 (1198)
++++++|+..+.+.+++|||+|+| +..+++.|+++++++ +++|.|++.+++++++.+|++||++|+||++||||+
T Consensus 322 ~d~li~a~~~l~~~~~~lvivG~G-~~~~~~~l~~l~~~~----~~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl 396 (489)
T PRK14098 322 AELLAESLEKLVELDIQLVICGSG-DKEYEKRFQDFAEEH----PEQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGM 396 (489)
T ss_pred HHHHHHHHHHHHhcCcEEEEEeCC-CHHHHHHHHHHHHHC----CCCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchH
Confidence 999999999998789999999998 444677888888865 478999999999999999999999999999999999
Q ss_pred HHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccC
Q 046057 1057 TQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEG 1136 (1198)
Q Consensus 1057 t~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~ 1136 (1198)
++||||+||+|||++++||+.|+|.+.+.+ ..|||+|++.|+++|+++|.
T Consensus 397 ~~lEAma~G~ppVv~~~GGl~d~v~~~~~~---------~~~G~l~~~~d~~~la~ai~--------------------- 446 (489)
T PRK14098 397 LQMFAMSYGTIPVAYAGGGIVETIEEVSED---------KGSGFIFHDYTPEALVAKLG--------------------- 446 (489)
T ss_pred HHHHHHhCCCCeEEecCCCCceeeecCCCC---------CCceeEeCCCCHHHHHHHHH---------------------
Confidence 999999999999999999999999865221 27899999999999999998
Q ss_pred CCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHhC
Q 046057 1137 QPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAARK 1198 (1198)
Q Consensus 1137 ~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~a~K 1198 (1198)
+++..+ ++++.|.++++++|.++|||+.+|++|+++|+++++
T Consensus 447 -------------------~~l~~~-~~~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 447 -------------------EALALY-HDEERWEELVLEAMERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred -------------------HHHHHH-cCHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHhc
Confidence 877655 678888999999999999999999999999998864
No 4
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=2.3e-64 Score=601.54 Aligned_cols=433 Identities=34% Similarity=0.584 Sum_probs=359.9
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCccccccccccccccc-CCCceeEEeeceecC
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYH-WGGTEIKVWFGKVEG 786 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~-~g~~~i~V~~~~~~G 786 (1198)
++|||+||+.|++|++|+|||++++.+|.++|+++||+|.||+|.|+++... ...+.....+. .-+..++++....+|
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAG-IEDAEQVHSFPDLFGGPARLLAARAGG 80 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhh-hcCceEEEEEeeeCCceEEEEEEEeCC
Confidence 4699999999999999999999999999999999999999999999988532 22222111221 112256788888899
Q ss_pred eEEEEeCCCCCcccccc-ccC------CCCchhhHHHHHHHHHHHHHhc--CCCceEEEECCCChhHHHHHHHHhhhhcC
Q 046057 787 LSVYFLEPQNGFFSKGC-VYG------CNNDKERFAFFCHAALEFLLQG--GFHPDIIHCHDWSSAPVAWLFKDHYVHYG 857 (1198)
Q Consensus 787 v~v~~l~~~~~~f~rg~-iYg------~~dd~~Rf~~F~~aale~L~~~--~~~PDVIH~Hdw~ta~va~llk~~y~~~g 857 (1198)
+.+|||+++ .+|.+.. +|+ +.|+.+||.+||++++++++.. +++|||||||||++++++.+++.. .
T Consensus 81 v~~~~~~~~-~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~----~ 155 (485)
T PRK14099 81 LDLFVLDAP-HLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYS----G 155 (485)
T ss_pred ceEEEEeCh-HhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhC----C
Confidence 999999977 4676664 774 3589999999999999999763 579999999999999999877532 1
Q ss_pred CCCCeEEEEecCCchhh----------------------------hHHHHHHhccCEEEEeCHHHHHHHhCCC-------
Q 046057 858 LSKARIVFTIHNLEFGT----------------------------HHIGKAMTYADKATTVSHTYSKEVAGDP------- 902 (1198)
Q Consensus 858 l~~ipvV~tIHn~~~~~----------------------------~li~~~~~~AD~VitVS~~~a~el~~~~------- 902 (1198)
..++|+|+||||+.++. ++++.++.+||.|+|||+++++++....
T Consensus 156 ~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~ 235 (485)
T PRK14099 156 RPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDG 235 (485)
T ss_pred CCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHH
Confidence 23689999999986531 3467888999999999999999997421
Q ss_pred CCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCC-CCCcEEEEEecCCCccCHHHHH
Q 046057 903 AIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRK-SDLPLVGIITRLTHQKGIHLIK 981 (1198)
Q Consensus 903 ~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~-~d~plIg~VGRL~~qKGidlIl 981 (1198)
.+..+..++.+|+||||.+.|+|..+..++.+|+.+++ ++|..++..+|+++||+. ++.++|++||||+++||+++++
T Consensus 236 ~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li 314 (485)
T PRK14099 236 LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLL 314 (485)
T ss_pred HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHH
Confidence 12335679999999999999999999999999999885 899999999999999973 4678999999999999999999
Q ss_pred HHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHH
Q 046057 982 HAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVA 1061 (1198)
Q Consensus 982 eAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEA 1061 (1198)
+|+..+.+.+++|||+|+| ++.+++.++++++++ ++++.++.++++++.+.++++||++|+||++||||+++|||
T Consensus 315 ~A~~~l~~~~~~lvivG~G-~~~~~~~l~~l~~~~----~~~v~~~~G~~~~l~~~~~a~aDifv~PS~~E~fGl~~lEA 389 (485)
T PRK14099 315 EALPTLLGEGAQLALLGSG-DAELEARFRAAAQAY----PGQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCA 389 (485)
T ss_pred HHHHHHHhcCcEEEEEecC-CHHHHHHHHHHHHHC----CCCEEEEeCCCHHHHHHHHhcCCEEEECCccCCCcHHHHHH
Confidence 9999998778999999998 555677888888765 35665455667777777778999999999999999999999
Q ss_pred HHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcc
Q 046057 1062 MRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMI 1141 (1198)
Q Consensus 1062 Ma~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1141 (1198)
|+||+|||++++||++|+|.+++...+ ..+..+|++|++.|+++|+++|.
T Consensus 390 ma~G~ppVvs~~GGl~d~V~~~~~~~~----~~~~~~G~l~~~~d~~~La~ai~-------------------------- 439 (485)
T PRK14099 390 LRYGAVPVVARVGGLADTVVDANEMAI----ATGVATGVQFSPVTADALAAALR-------------------------- 439 (485)
T ss_pred HHCCCCcEEeCCCCccceeeccccccc----ccCCCceEEeCCCCHHHHHHHHH--------------------------
Confidence 999999999999999999987521110 01125899999999999999988
Q ss_pred cccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHh
Q 046057 1142 PFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1142 ~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~a~ 1197 (1198)
+++..+ ++++.+.+|++++|.++|||+++|++|+++|++++
T Consensus 440 --------------~a~~l~-~d~~~~~~l~~~~~~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 440 --------------KTAALF-ADPVAWRRLQRNGMTTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred --------------HHHHHh-cCHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHH
Confidence 776655 78889999999999999999999999999999875
No 5
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.1e-62 Score=583.91 Aligned_cols=428 Identities=41% Similarity=0.740 Sum_probs=364.6
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeec--eecCe
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFG--KVEGL 787 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~--~~~Gv 787 (1198)
|||+||++|++|++++||++++|.+|+++|+++||+|.||+|.|+++.... ......... ...+++.+ ..+|+
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~gv 75 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKL-RDAQVVGRL----DLFTVLFGHLEGDGV 75 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhh-cCceEEEEe----eeEEEEEEeEEcCCc
Confidence 899999999999999999999999999999999999999999998764321 111100000 12455555 45899
Q ss_pred EEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEe
Q 046057 788 SVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTI 867 (1198)
Q Consensus 788 ~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tI 867 (1198)
++|+++++ .+|.+.++|++.++.+||.+||+++++++++.+.+|||||||+|++++++.+++..| ..++.++|+|+|+
T Consensus 76 ~v~~v~~~-~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~-~~~~~~~~~v~Ti 153 (466)
T PRK00654 76 PVYLIDAP-HLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKY-WRGYPDIKTVFTI 153 (466)
T ss_pred eEEEEeCH-HHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhh-hccCCCCCEEEEc
Confidence 99999985 578888999999999999999999999999887899999999999999999998775 3445579999999
Q ss_pred cCCchh----------------------------hhHHHHHHhccCEEEEeCHHHHHHHhCCC-------CCCCCCCcEE
Q 046057 868 HNLEFG----------------------------THHIGKAMTYADKATTVSHTYSKEVAGDP-------AIAPHLHKFY 912 (1198)
Q Consensus 868 Hn~~~~----------------------------~~li~~~~~~AD~VitVS~~~a~el~~~~-------~l~~~~~K~~ 912 (1198)
|++.++ .++++.++.+||.++|||+.+++++.... .+..+..|+.
T Consensus 154 H~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~ 233 (466)
T PRK00654 154 HNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLS 233 (466)
T ss_pred CCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCce
Confidence 998642 23456678999999999999999997421 1233467899
Q ss_pred EEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCc
Q 046057 913 GILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGG 992 (1198)
Q Consensus 913 vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~ 992 (1198)
+|+||||.+.|+|..|..++.+|+..++ ++|..+++.+++++|++..+.++|+++|||+++||++++++|+..+.++++
T Consensus 234 vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~ 312 (466)
T PRK00654 234 GILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGG 312 (466)
T ss_pred EecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhcCC
Confidence 9999999999999999999999998875 799999999999999985578999999999999999999999999987799
Q ss_pred EEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeC
Q 046057 993 QVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRK 1072 (1198)
Q Consensus 993 qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~ 1072 (1198)
+|+|+|+| ++.+.+.+++++++++ +++.++.++++++++.+|++||++|+||++||||++++|||+||+|||+++
T Consensus 313 ~lvivG~g-~~~~~~~l~~l~~~~~----~~v~~~~g~~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~ 387 (466)
T PRK00654 313 QLVLLGTG-DPELEEAFRALAARYP----GKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRR 387 (466)
T ss_pred EEEEEecC-cHHHHHHHHHHHHHCC----CcEEEEEeCCHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeC
Confidence 99999997 4556778888888764 468877788888889999999999999999999999999999999999999
Q ss_pred CccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccch
Q 046057 1073 TGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTY 1152 (1198)
Q Consensus 1073 tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1152 (1198)
+||++|+|.+++.+. ...+|++|++.|+++|+++|.
T Consensus 388 ~gG~~e~v~~~~~~~-------~~~~G~lv~~~d~~~la~~i~------------------------------------- 423 (466)
T PRK00654 388 TGGLADTVIDYNPED-------GEATGFVFDDFNAEDLLRALR------------------------------------- 423 (466)
T ss_pred CCCccceeecCCCCC-------CCCceEEeCCCCHHHHHHHHH-------------------------------------
Confidence 999999998864331 237899999999999999998
Q ss_pred hHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHhC
Q 046057 1153 DSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAARK 1198 (1198)
Q Consensus 1153 ~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~a~K 1198 (1198)
+++..+ .+++.+.++++++++++|||++++++|+++|+++++
T Consensus 424 ---~~l~~~-~~~~~~~~~~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 424 ---RALELY-RQPPLWRALQRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred ---HHHHHh-cCHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 777665 456667899999998999999999999999998763
No 6
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=2e-61 Score=573.10 Aligned_cols=430 Identities=43% Similarity=0.772 Sum_probs=367.3
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCccccccccc--ccccc--cCCCceeEEeeceec
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLG--YNRSY--HWGGTEIKVWFGKVE 785 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~--~~~~~--~~g~~~i~V~~~~~~ 785 (1198)
|||+||+.|++|++++||+++++.+|+++|+++||+|.||+|.|++.......... ....+ .+....++++....+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 89999999999999999999999999999999999999999999986543211111 11111 223345678888899
Q ss_pred CeEEEEeCCCCCcccc-ccccC--CCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCe
Q 046057 786 GLSVYFLEPQNGFFSK-GCVYG--CNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKAR 862 (1198)
Q Consensus 786 Gv~v~~l~~~~~~f~r-g~iYg--~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ip 862 (1198)
|+++|++++.. +|.+ +.+|+ +.++..||.+|++++++++++.+.+|||||||+|++++++.+++..+.. .++|
T Consensus 81 ~v~~~~i~~~~-~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~---~~~~ 156 (473)
T TIGR02095 81 GVPVYFIDNPS-LFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRP---NPIK 156 (473)
T ss_pred CceEEEEECHH-HcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccC---CCCC
Confidence 99999999763 6766 46898 6788999999999999999988889999999999999999988876521 1489
Q ss_pred EEEEecCCchh----------------------------hhHHHHHHhccCEEEEeCHHHHHHHhCCC-------CCCCC
Q 046057 863 IVFTIHNLEFG----------------------------THHIGKAMTYADKATTVSHTYSKEVAGDP-------AIAPH 907 (1198)
Q Consensus 863 vV~tIHn~~~~----------------------------~~li~~~~~~AD~VitVS~~~a~el~~~~-------~l~~~ 907 (1198)
+|+|+|++.++ .++++.++.+||.++|||+.+++++.... .+..+
T Consensus 157 ~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~ 236 (473)
T TIGR02095 157 TVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKAR 236 (473)
T ss_pred EEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhc
Confidence 99999998642 12356688999999999999999997421 11234
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCC-CCCcEEEEEecCCCccCHHHHHHHHHH
Q 046057 908 LHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRK-SDLPLVGIITRLTHQKGIHLIKHAIWR 986 (1198)
Q Consensus 908 ~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~-~d~plIg~VGRL~~qKGidlIleAl~~ 986 (1198)
..++.+|+||||.+.|+|..|.+++.+|+..++ .++..++..+++++|++. ++.++|+++||++++||++++++|+..
T Consensus 237 ~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 315 (473)
T TIGR02095 237 SGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPE 315 (473)
T ss_pred CCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHH
Confidence 579999999999999999999999999998775 788889999999999983 478999999999999999999999999
Q ss_pred hhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCC
Q 046057 987 TLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGS 1066 (1198)
Q Consensus 987 ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~ 1066 (1198)
+.+.+++|+|+|+| ++.+.+.+++++.++ +.++.|++.+++++++.+|++||++|+||.+||||+++||||+||+
T Consensus 316 l~~~~~~lvi~G~g-~~~~~~~l~~~~~~~----~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~ 390 (473)
T TIGR02095 316 LLELGGQLVVLGTG-DPELEEALRELAERY----PGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGT 390 (473)
T ss_pred HHHcCcEEEEECCC-CHHHHHHHHHHHHHC----CCcEEEEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCC
Confidence 98778999999998 456677888888754 4679999999999999999999999999999999999999999999
Q ss_pred cEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCccccccc
Q 046057 1067 IPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQK 1146 (1198)
Q Consensus 1067 PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1146 (1198)
|||++++||+.|+|.+++... ...+|++|++.|+++|+++|.
T Consensus 391 pvI~s~~gg~~e~v~~~~~~~-------~~~~G~l~~~~d~~~la~~i~------------------------------- 432 (473)
T TIGR02095 391 VPIVRRTGGLADTVVDGDPEA-------ESGTGFLFEEYDPGALLAALS------------------------------- 432 (473)
T ss_pred CeEEccCCCccceEecCCCCC-------CCCceEEeCCCCHHHHHHHHH-------------------------------
Confidence 999999999999999864321 236899999999999999999
Q ss_pred ccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 046057 1147 QSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1147 ~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~a 1196 (1198)
+++..+.++++.+++++++++.++|||++++++|+++|+++
T Consensus 433 ---------~~l~~~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 433 ---------RALRLYRQDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred ---------HHHHHHhcCHHHHHHHHHHHhccCCCcHHHHHHHHHHHHhC
Confidence 88888777999999999999989999999999999999874
No 7
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-61 Score=571.36 Aligned_cols=434 Identities=39% Similarity=0.630 Sum_probs=375.1
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccc--cCCC--ceeEEeeceec
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSY--HWGG--TEIKVWFGKVE 785 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~--~~g~--~~i~V~~~~~~ 785 (1198)
|||++++.|+.|+.|+||+++++.+|.++|++.||+|+|+.|.|+.+.......++....+ .+++ ....+.....+
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 8999999999999999999999999999999999999999999995443332222221111 1222 22222233323
Q ss_pred C-eEEEEeCCCCCcccc--ccccCCCCchhhHHHHHHHHHHHHHhcC--CCceEEEECCCChhHHHHHHHHhhhhcCCCC
Q 046057 786 G-LSVYFLEPQNGFFSK--GCVYGCNNDKERFAFFCHAALEFLLQGG--FHPDIIHCHDWSSAPVAWLFKDHYVHYGLSK 860 (1198)
Q Consensus 786 G-v~v~~l~~~~~~f~r--g~iYg~~dd~~Rf~~F~~aale~L~~~~--~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ 860 (1198)
| +++++++.+ .+|.| .+.|++.|+..||.+|+.++++++.... ..|||||||||++++++.+++..+ .....
T Consensus 81 ~~v~~~lid~~-~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~--~~~~~ 157 (487)
T COG0297 81 GGVDLYLIDNP-ALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRY--RSGYI 157 (487)
T ss_pred CCCcEEEecCh-hhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcc--ccccc
Confidence 3 899999955 57776 4789999999999999999999997765 589999999999999999999865 22348
Q ss_pred CeEEEEecCCchh----------------------------hhHHHHHHhccCEEEEeCHHHHHHHhC-------CCCCC
Q 046057 861 ARIVFTIHNLEFG----------------------------THHIGKAMTYADKATTVSHTYSKEVAG-------DPAIA 905 (1198)
Q Consensus 861 ipvV~tIHn~~~~----------------------------~~li~~~~~~AD~VitVS~~~a~el~~-------~~~l~ 905 (1198)
+|.||||||+.++ .++++.++.+||.|+|||++|++++.. ++.+.
T Consensus 158 i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~ 237 (487)
T COG0297 158 IPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLS 237 (487)
T ss_pred CCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhh
Confidence 9999999999764 257889999999999999999999983 24445
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCC-CCCCcEEEEEecCCCccCHHHHHHHH
Q 046057 906 PHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLR-KSDLPLVGIITRLTHQKGIHLIKHAI 984 (1198)
Q Consensus 906 ~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~-~~d~plIg~VGRL~~qKGidlIleAl 984 (1198)
....++.+|.||||.+.|+|..|..++.+|+.+++ +.|..+|..|+.++||+ ..+.|++++||||+.|||++++++|+
T Consensus 238 ~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~-~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i 316 (487)
T COG0297 238 WRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVL-PAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAI 316 (487)
T ss_pred hccccEEEEEeeEEecccCcccccchhccCCccch-hhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHH
Confidence 55689999999999999999999999999999887 46999999999999999 44779999999999999999999999
Q ss_pred HHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHh
Q 046057 985 WRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRY 1064 (1198)
Q Consensus 985 ~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~ 1064 (1198)
..+++.++|||++|.| ++.++..|..+++++ ++++.+..++++++++.+|++||++++||+||||||++|+||+|
T Consensus 317 ~~~l~~~~~~vilG~g-d~~le~~~~~la~~~----~~~~~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry 391 (487)
T COG0297 317 DELLEQGWQLVLLGTG-DPELEEALRALASRH----PGRVLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY 391 (487)
T ss_pred HHHHHhCceEEEEecC-cHHHHHHHHHHHHhc----CceEEEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc
Confidence 9999999999999999 999999999999864 56899999999999999999999999999999999999999999
Q ss_pred CCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCccccc
Q 046057 1065 GSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFK 1144 (1198)
Q Consensus 1065 G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1144 (1198)
|++||++.+||++|+|.+.+++. .....|||+|.+.+++.|+.+|.
T Consensus 392 GtvpIv~~tGGLadTV~~~~~~~-----~~~~gtGf~f~~~~~~~l~~al~----------------------------- 437 (487)
T COG0297 392 GTLPIVRETGGLADTVVDRNEWL-----IQGVGTGFLFLQTNPDHLANALR----------------------------- 437 (487)
T ss_pred CCcceEcccCCccceecCccchh-----ccCceeEEEEecCCHHHHHHHHH-----------------------------
Confidence 99999999999999999875542 12348999999999999999999
Q ss_pred ccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHh
Q 046057 1145 QKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1145 ~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~a~ 1197 (1198)
+|+..+...+..|+.+++++|..+|||+..|.+|.++|+.++
T Consensus 438 -----------rA~~~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~ 479 (487)
T COG0297 438 -----------RALVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYKPLL 479 (487)
T ss_pred -----------HHHHHhhCCHHHHHHHHHhhcccccCchhHHHHHHHHHHHHh
Confidence 999999888887899999999999999999999999999875
No 8
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=2.3e-58 Score=545.10 Aligned_cols=430 Identities=43% Similarity=0.750 Sum_probs=363.5
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCccccccccccc----ccccCCCceeEEeeceecC
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYN----RSYHWGGTEIKVWFGKVEG 786 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~----~~~~~g~~~i~V~~~~~~G 786 (1198)
||+||++|++|+.++||+++++.+|+++|+++||+|+||+|.|++............ ..+......++++.....|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 699999999999999999999999999999999999999999998764432222211 1222334567888888999
Q ss_pred eEEEEeCCCCCcccccc-----ccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCC
Q 046057 787 LSVYFLEPQNGFFSKGC-----VYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKA 861 (1198)
Q Consensus 787 v~v~~l~~~~~~f~rg~-----iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~i 861 (1198)
+++|+++++. ++.+.. .|++.++..||.+|++++++++++.+.+|||||||+|++++++.+++..+....+.++
T Consensus 81 v~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~ 159 (476)
T cd03791 81 VPVYFLDNPD-YFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNI 159 (476)
T ss_pred ceEEEEcChH-HcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCC
Confidence 9999999864 444433 4667788999999999999999988889999999999999999988877533334589
Q ss_pred eEEEEecCCchh-----------------------------hhHHHHHHhccCEEEEeCHHHHHHHhCC-------CCCC
Q 046057 862 RIVFTIHNLEFG-----------------------------THHIGKAMTYADKATTVSHTYSKEVAGD-------PAIA 905 (1198)
Q Consensus 862 pvV~tIHn~~~~-----------------------------~~li~~~~~~AD~VitVS~~~a~el~~~-------~~l~ 905 (1198)
|+|+|+|++.+. .++++.++.+||.++|||+.+++++... ..+.
T Consensus 160 ~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~ 239 (476)
T cd03791 160 KTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLR 239 (476)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHH
Confidence 999999998543 1466778899999999999999999741 1223
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCC-CCCCcEEEEEecCCCccCHHHHHHHH
Q 046057 906 PHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLR-KSDLPLVGIITRLTHQKGIHLIKHAI 984 (1198)
Q Consensus 906 ~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~-~~d~plIg~VGRL~~qKGidlIleAl 984 (1198)
.+..++.+|+||||.+.|+|..+..++..|+... ..++..++..+++++|++ .++.++|+++||++++||++++++|+
T Consensus 240 ~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~-~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~ 318 (476)
T cd03791 240 ARAGKLSGILNGIDYDVWNPATDPHLPANYSADD-LEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEAL 318 (476)
T ss_pred hccCCeEEEeCCCcCcccCccccchhhhcCCccc-cccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHH
Confidence 3457999999999999999999998998888654 589999999999999996 45889999999999999999999999
Q ss_pred HHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHh
Q 046057 985 WRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRY 1064 (1198)
Q Consensus 985 ~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~ 1064 (1198)
..+.+.+++|+|+|+| ++.+.+.+++++.++ ++++.|++++++++++.+|++||++|+||++||||++++|||+|
T Consensus 319 ~~l~~~~~~lvi~G~g-~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~ 393 (476)
T cd03791 319 PELLELGGQLVILGSG-DPEYEEALRELAARY----PGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393 (476)
T ss_pred HHHHHcCcEEEEEecC-CHHHHHHHHHHHHhC----CCcEEEEEeCCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC
Confidence 9998778999999998 555667777777754 47899999999999999999999999999999999999999999
Q ss_pred CCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCccccc
Q 046057 1065 GSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFK 1144 (1198)
Q Consensus 1065 G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1144 (1198)
|+|||++++||+.|+|.+++... ...+|++|++.|+++|+++|.
T Consensus 394 G~pvI~~~~gg~~e~v~~~~~~~-------~~~~G~~~~~~~~~~l~~~i~----------------------------- 437 (476)
T cd03791 394 GTVPIVRATGGLADTVIDYNEDT-------GEGTGFVFEGYNADALLAALR----------------------------- 437 (476)
T ss_pred CCCCEECcCCCccceEeCCcCCC-------CCCCeEEeCCCCHHHHHHHHH-----------------------------
Confidence 99999999999999999872110 124899999999999999998
Q ss_pred ccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 046057 1145 QKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRA 1195 (1198)
Q Consensus 1145 ~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~ 1195 (1198)
+++..+ .+++.+.+++++++.+.|||++++++|+++|++
T Consensus 438 -----------~~l~~~-~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~ 476 (476)
T cd03791 438 -----------RALALY-RDPEAWRKLQRNAMAQDFSWDRSAKEYLELYRS 476 (476)
T ss_pred -----------HHHHHH-cCHHHHHHHHHHHhccCCChHHHHHHHHHHHhC
Confidence 776654 558888999999999999999999999999973
No 9
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.3e-58 Score=578.48 Aligned_cols=279 Identities=27% Similarity=0.482 Sum_probs=231.6
Q ss_pred HHHHHHHhhc-ccCCCCcEEEecccCCCCCeEEEEEcccCCCCCCCCcEEEEeecCCcccc-ccceecccccC-CCCeEE
Q 046057 248 KQEIERLADE-NFLRQKKIFVYPQVVKPDQDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWK-SFTFRLNKTHL-KGDWWS 324 (1198)
Q Consensus 248 ~~~~~~~~~~-~~~~g~~v~v~P~~~~aG~~v~v~yN~~l~~L~~~~~v~ih~GfN~W~~~-~~~~~~~~t~~-~~dWw~ 324 (1198)
+.+|+.|... ..+.+++|||+|+.++||++|+||||++.++|+++++|+||||||+|.+. +++.+|.++.. .++||+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~P~~~~aG~~v~lyYN~~~~~L~~~~~v~i~gg~N~W~~~~~~~~~~~~~~~~~g~ww~ 379 (1036)
T PLN02316 300 REKLQNLLKKASRSADNVWYIEPSEFKAGDTVKLYYNRSSGPLAHSTEIWIHGGYNNWIDGLSIVEKLVKSEEKDGDWWY 379 (1036)
T ss_pred HHHHHHHHhhhhhcccceEEecCCCcCCCCEEEEEECCCCCCCCCCCcEEEEEeEcCCCCCCcccceeecccCCCCCEEE
Confidence 3444444443 56899999999999999999999999999999999999999999999985 46677777765 588999
Q ss_pred EEEEecCCceeEeEEEEcCC----cccccCCCCceEEEEcCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046057 325 CQVHVPKEAFKIDFVFFNGQ----NIYENNDQKDFCIAVEGLMDALAFEDFLLEEKRREQEKLAKEKAEQERQEEERRRI 400 (1198)
Q Consensus 325 ~~v~VP~~A~~lnFvF~dg~----~~wDNN~g~d~~~~V~~g~~~~~~~~~~~ee~r~~~e~la~e~aer~~~~~e~rr~ 400 (1198)
|+|.||.+|+.|||||+||. ++||||+|+|||++|.++++++ +|+++|+.+++++++.|+++| +|++|+.
T Consensus 380 a~v~vP~~A~~mDfVFsdg~~~~~~~yDNn~~~Dyh~~v~~~~~~~---~~~~~~~~~~~~~l~~~~~~~---~~~~r~k 453 (1036)
T PLN02316 380 AEVVVPERALVLDWVFADGPPGNARNYDNNGRQDFHAIVPNNIPEE---LYWVEEEHQIYRKLQEERRLR---EEAIRAK 453 (1036)
T ss_pred EEEecCCCceEEEEEEecCCcccccccccCCCcceeeecCCCCchh---hhhHHHHHHHHHHHHHHHHhh---HHHHHHH
Confidence 99999999999999999994 8999999999999999998864 467788888888886554444 3333433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcEEEecCCCCCCCcEEEEEEeCCCCCCCCCCceEEEEEeCCCC
Q 046057 401 EAEHAAIEADRAQARVETERKREMLRELKKKAARSVDNVWYIEPSEFKGEDLVRLYYNKQSSSLAHAKELWIHGGYNNWK 480 (1198)
Q Consensus 401 ~~~~aa~~a~~a~A~~~~~~~~~~~~~~~~~a~~~~~~v~~~~P~~~~aG~~V~v~YN~~~g~L~ga~~I~lh~G~N~W~ 480 (1198)
++++ |++|+|+.++ .+..++.++.|+|||+|..|+||++|||||||++++|+|+++||||||||||+
T Consensus 454 ~~~~-------a~~~ae~k~~------~~~~~l~~~~~~~~teP~~~~aG~~v~v~Yn~~~t~l~~~~ev~~~g~~NrWt 520 (1036)
T PLN02316 454 AEKT-------ARMKAEMKEK------TLKMFLLSQKHIVYTEPLEVQAGTTVTVLYNPANTVLNGKPEVWFRGSFNRWT 520 (1036)
T ss_pred HHHH-------HHHHHHHHHH------HHHhhhhccceEEEecCCCCCCCCEEEEEECCCCCcCCCCceEEEEccccCcC
Confidence 3222 2333333332 22345678889999999999999999999999999999999999999999999
Q ss_pred CCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecCCCCCCccccCCCCcceEEEecCCCCcc
Q 046057 481 DGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAIVYDNNSRQDFHAIVPKSIPDE 547 (1198)
Q Consensus 481 ~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~~~~~~~~wDNN~g~dyh~~V~~~~~~e 547 (1198)
|+.+...++.|....+|+||+|||+||.+||+|||||+|++ ++++||||+|+|||+++.|++.++
T Consensus 521 h~~~~~~~~~m~~~~~g~~~~a~v~vP~da~~mdfvFs~~~--~g~~yDn~~~~dyh~~v~g~~~~~ 585 (1036)
T PLN02316 521 HRLGPLPPQKMVPADNGSHLKATVKVPLDAYMMDFVFSEKE--EGGIFDNRNGLDYHIPVFGGIAKE 585 (1036)
T ss_pred CCCCCCCceeeeecCCCceEEEEEEccccceEEEEEEecCC--CCCCcCCCCCcCCcccccCCCCCC
Confidence 99875555566666778999999999999999999999996 337999999999999999987765
No 10
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=2.9e-41 Score=409.67 Aligned_cols=424 Identities=21% Similarity=0.256 Sum_probs=331.2
Q ss_pred EEEEccccC-----CCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccc-c--c-------------ccc-----
Q 046057 712 IVHIAVEMA-----PIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSD-V--K-------------DLG----- 765 (1198)
Q Consensus 712 IL~Vs~e~~-----P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~-~--~-------------~l~----- 765 (1198)
|+++|.||. |+ ..||||+...+-.+++++.|.....|...|..--..+ + . .+.
T Consensus 1 ~ayf~~E~g~~~~~p~-ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLPI-YSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 456666654 54 4899999999999999999999998876543211110 0 0 000
Q ss_pred ------ccccccC--CCceeEEeeceecCeEEEEeCCC---CCccccc---cccCCCCchhhH---HHHHHHHHHHHHhc
Q 046057 766 ------YNRSYHW--GGTEIKVWFGKVEGLSVYFLEPQ---NGFFSKG---CVYGCNNDKERF---AFFCHAALEFLLQG 828 (1198)
Q Consensus 766 ------~~~~~~~--g~~~i~V~~~~~~Gv~v~~l~~~---~~~f~rg---~iYg~~dd~~Rf---~~F~~aale~L~~~ 828 (1198)
....+.. ....+++|...+.++++|+++.. +.+|.+. .+|+. |+..|+ .+|+.+.++.++..
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~-D~~~R~~Qe~fl~~a~l~~l~~l 158 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG-DKEMRIAQEIVLGIGGVRALRAL 158 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC-CHHHHHHHHHHHHHHHHHHHHHc
Confidence 0011111 22346788888889999999865 3467666 57874 455566 99999999999988
Q ss_pred CCCceEEEECCCChhHHHHHHHHhhhhcCC--------CCCeEEEEecCCchhh--------------------------
Q 046057 829 GFHPDIIHCHDWSSAPVAWLFKDHYVHYGL--------SKARIVFTIHNLEFGT-------------------------- 874 (1198)
Q Consensus 829 ~~~PDVIH~Hdw~ta~va~llk~~y~~~gl--------~~ipvV~tIHn~~~~~-------------------------- 874 (1198)
+.+|||||||||++++++..+...+...++ .+..+|||+||+.+..
T Consensus 159 ~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~ 238 (601)
T TIGR02094 159 GIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQ 238 (601)
T ss_pred CCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHH
Confidence 899999999999999999886433211111 1467999999996531
Q ss_pred ---------------hHHHHHHhccCEEEEeCHHHHHHHh---C--CCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcc
Q 046057 875 ---------------HHIGKAMTYADKATTVSHTYSKEVA---G--DPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVS 934 (1198)
Q Consensus 875 ---------------~li~~~~~~AD~VitVS~~~a~el~---~--~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ 934 (1198)
++++.++.+||.|.|||+.+++... . .+.+.....++.+|.||||...|.|.+++.|+.+
T Consensus 239 ~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~ 318 (601)
T TIGR02094 239 LLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYER 318 (601)
T ss_pred HHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHH
Confidence 3455678899999999999998332 2 1222444567999999999999999999999998
Q ss_pred cccch---------------------hhhchHHHHHHHHH---------------------HhCCC-CCCCcEEEEEecC
Q 046057 935 YTSEN---------------------LVEGKRAAKEALQQ---------------------KVGLR-KSDLPLVGIITRL 971 (1198)
Q Consensus 935 ys~~~---------------------~~~gk~~~k~aLrq---------------------~lGL~-~~d~plIg~VGRL 971 (1198)
|+..+ ++++|..+|.+|++ ++|++ +++.+++++++||
T Consensus 319 y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl 398 (601)
T TIGR02094 319 YLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRF 398 (601)
T ss_pred hCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcc
Confidence 88777 46899999999998 46665 5688999999999
Q ss_pred CCccCHHHHHHHHHHhhc------CCcEEEEEecCCChh------hHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 972 THQKGIHLIKHAIWRTLD------RGGQVVLLGSAPDPR------IQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 972 ~~qKGidlIleAl~~ll~------~~~qLVIvGsgpdp~------i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
+.+||+++|++++.++.+ .++|||++|++ +|. +.+.+.+++++. .++++|.|+..|+..+.+.++
T Consensus 399 ~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka-~p~d~~gk~~i~~i~~la~~~--~~~~kv~f~~~Yd~~lA~~i~ 475 (601)
T TIGR02094 399 ATYKRADLIFRDLERLARILNNPERPVQIVFAGKA-HPADGEGKEIIQRIVEFSKRP--EFRGRIVFLENYDINLARYLV 475 (601)
T ss_pred hhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEec-CcccchHHHHHHHHHHHHhcc--cCCCCEEEEcCCCHHHHHHHh
Confidence 999999999999988863 57999999998 665 667777777642 257899999999999999999
Q ss_pred HHccEEEE-cCC-CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEc------------CC
Q 046057 1040 AGADFILV-PSI-FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFD------------GA 1105 (1198)
Q Consensus 1040 A~ADi~Lv-PS~-~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~------------~~ 1105 (1198)
++||++++ ||+ +||||+++|.||++|.+.+++--|...|.. ++ .|||.|. ..
T Consensus 476 aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~-------------~nGf~f~~~~~~~~~~~~d~~ 541 (601)
T TIGR02094 476 SGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DG-------------DNGWAIGDGEEYDDEEEQDRL 541 (601)
T ss_pred hhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CC-------------CcEEEECCCccccccccccCC
Confidence 99999999 999 999999999999987777766666655554 33 7999998 48
Q ss_pred CHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHH-HHHhcC-----HHHHHHHHHHHHHh-
Q 046057 1106 DIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAI-SAYYDG-----REWLNSLCKTVMEQ- 1178 (1198)
Q Consensus 1106 D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI-~~l~~~-----~e~~~~L~~~am~q- 1178 (1198)
|+++|.++|. ++| ..|+++ |..|.++++++|..
T Consensus 542 da~~l~~~L~----------------------------------------~ai~~~yy~~~~~~~p~~W~~~~k~am~~~ 581 (601)
T TIGR02094 542 DAEALYDLLE----------------------------------------NEVIPLYYDRDEKGIPADWVEMMKESIATI 581 (601)
T ss_pred CHHHHHHHHH----------------------------------------HHHHHHHhcCCcccCcHHHHHHHHHHHhcc
Confidence 9999999998 888 777775 55689999999998
Q ss_pred --cCChHHHHHHHHHHHH
Q 046057 1179 --DWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1179 --dfSW~~~A~~yielY~ 1194 (1198)
+|||+++|++|.++|.
T Consensus 582 ~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 582 APRFSTNRMVREYVDKFY 599 (601)
T ss_pred CCCCCHHHHHHHHHHHhC
Confidence 7999999999999883
No 11
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=3.9e-38 Score=371.33 Aligned_cols=371 Identities=20% Similarity=0.217 Sum_probs=264.4
Q ss_pred CCCcHHHHHHHHHHHHHhCCC--eEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCCCCcccc
Q 046057 724 KVGGLGDVVTSLSRTVQDLNH--NVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSK 801 (1198)
Q Consensus 724 kvGGl~~vV~~LarAL~~~GH--~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~~~f~r 801 (1198)
.+||++.++.+|+++|+++|| +|+|+|..+....... + + .. .+....+|++++.++.....
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~--~------~--~~----~~~~~~~gv~v~r~~~~~~~--- 86 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSP--D------Y--AQ----PIERIAPGARIVRLPFGPRR--- 86 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCC--c------c--CC----CeeEeCCCcEEEEecCCCCC---
Confidence 589999999999999999998 9999997543210000 0 0 00 01122467777776532110
Q ss_pred ccccCCCCch-hhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhh-----
Q 046057 802 GCVYGCNNDK-ERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTH----- 875 (1198)
Q Consensus 802 g~iYg~~dd~-~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~----- 875 (1198)
|....+. ..+..|...+.+++++.+.+|||||||+|.+++++.+++... ++|+|+|+|+.....+
T Consensus 87 ---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~------~~p~V~t~H~~~~~~~~~~~~ 157 (439)
T TIGR02472 87 ---YLRKELLWPYLDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL------GVPLIFTGHSLGREKRRRLLA 157 (439)
T ss_pred ---CcChhhhhhhHHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh------CCCEEEecccccchhhhhccc
Confidence 1000011 112455667777777655589999999998888887776654 7899999998643110
Q ss_pred -------------------HHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccc
Q 046057 876 -------------------HIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYT 936 (1198)
Q Consensus 876 -------------------li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys 936 (1198)
..+..+..+|.++++|+....+... .....+..|+.+||||||.+.|.|....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~-~~~~~~~~ki~vIpnGvd~~~f~~~~~~------- 229 (439)
T TIGR02472 158 AGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYA-LYDSYQPERMQVIPPGVDLSRFYPPQSS------- 229 (439)
T ss_pred CCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHH-hccCCCccceEEECCCcChhhcCCCCcc-------
Confidence 1234678899999999765443321 1112345789999999999988774211
Q ss_pred cchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhh--cCCcEEE-EEecCCChh--------h
Q 046057 937 SENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTL--DRGGQVV-LLGSAPDPR--------I 1005 (1198)
Q Consensus 937 ~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll--~~~~qLV-IvGsgpdp~--------i 1005 (1198)
......+..+ ++++.+ ++.++|+++|||.+.||++.+++|+..+. ....+++ |+|++++.. .
T Consensus 230 -----~~~~~~~~~~-~~~~~~-~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~ 302 (439)
T TIGR02472 230 -----EETSEIDNLL-APFLKD-PEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREV 302 (439)
T ss_pred -----ccchhHHHHH-Hhhccc-cCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHH
Confidence 0111122223 334444 36779999999999999999999998642 2334554 568775421 1
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHc----cEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccccccc
Q 046057 1006 QNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVF 1081 (1198)
Q Consensus 1006 ~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~A----Di~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~ 1081 (1198)
.+.+..+++++++. ++|.|+|.++.+.+..+|+.| |++|+||.+|+||++++|||+||+|+|+|++||++|+|.
T Consensus 303 ~~~~~~~~~~~~l~--~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~ 380 (439)
T TIGR02472 303 LQKVLLLIDRYDLY--GKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIA 380 (439)
T ss_pred HHHHHHHHHHcCCC--ceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhc
Confidence 22355677888874 789999988888899999987 999999999999999999999999999999999999998
Q ss_pred ccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHH
Q 046057 1082 DVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAY 1161 (1198)
Q Consensus 1082 d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l 1161 (1198)
++ .+|++|++.|+++|+++|. .+
T Consensus 381 ~~-------------~~G~lv~~~d~~~la~~i~--------------------------------------------~l 403 (439)
T TIGR02472 381 NC-------------RNGLLVDVLDLEAIASALE--------------------------------------------DA 403 (439)
T ss_pred CC-------------CcEEEeCCCCHHHHHHHHH--------------------------------------------HH
Confidence 87 8999999999999996655 44
Q ss_pred hcCHHHHHHHHHHH---HHhcCChHHHHHHHHHHHH
Q 046057 1162 YDGREWLNSLCKTV---MEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1162 ~~~~e~~~~L~~~a---m~qdfSW~~~A~~yielY~ 1194 (1198)
.++++.+.+|++++ +.+.|||+.++.+|+++++
T Consensus 404 l~~~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 404 LSDSSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 46788888888887 4578999999999999864
No 12
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=2.3e-38 Score=365.76 Aligned_cols=374 Identities=21% Similarity=0.288 Sum_probs=277.4
Q ss_pred EEEEccccCCCC-----CCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecC
Q 046057 712 IVHIAVEMAPIA-----KVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEG 786 (1198)
Q Consensus 712 IL~Vs~e~~P~a-----kvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~G 786 (1198)
|++|+....|.. ..||.++++..|+++|+++||+|+|+++....... . .....+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~----------------~----~~~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQP----------------P----VVEVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCC----------------C----ccccCCC
Confidence 445555555531 25999999999999999999999999975321100 0 0011245
Q ss_pred eEEEEeCCCCCccccccccCCCCchhhHHHHHHHHH-HHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEE
Q 046057 787 LSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAAL-EFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVF 865 (1198)
Q Consensus 787 v~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aal-e~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~ 865 (1198)
+.++.+.... +... +.......+..|....+ .++++...+|||||+|+|.+++++++++..+ ++|+|+
T Consensus 61 ~~v~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~------~~p~v~ 129 (405)
T TIGR03449 61 VRVRNVVAGP-YEGL----DKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRW------GVPLVH 129 (405)
T ss_pred cEEEEecCCC-cccC----CHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhc------CCCEEE
Confidence 6666553211 0000 00000011222333334 4455444689999999988888887776654 789999
Q ss_pred EecCCchhh---------------hH-HHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCC
Q 046057 866 TIHNLEFGT---------------HH-IGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDK 929 (1198)
Q Consensus 866 tIHn~~~~~---------------~l-i~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~ 929 (1198)
|+|+..... .+ .+..+..+|.++++|+...+.+.. .++....++.+|+||+|.+.|.|.
T Consensus 130 t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~--~~~~~~~ki~vi~ngvd~~~~~~~--- 204 (405)
T TIGR03449 130 TAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR--HYDADPDRIDVVAPGADLERFRPG--- 204 (405)
T ss_pred eccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH--HcCCChhhEEEECCCcCHHHcCCC---
Confidence 999864311 11 134678899999999998887752 223445789999999999887652
Q ss_pred CCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CC--cEEEEEecCCCh--
Q 046057 930 FIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RG--GQVVLLGSAPDP-- 1003 (1198)
Q Consensus 930 ~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~--~qLVIvGsgpdp-- 1003 (1198)
.+..++++++++ ++.++|+++||+.+.||++.+++|+..+.+ ++ ++|+|+|++.+.
T Consensus 205 -----------------~~~~~~~~~~~~-~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~ 266 (405)
T TIGR03449 205 -----------------DRATERARLGLP-LDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGL 266 (405)
T ss_pred -----------------cHHHHHHhcCCC-CCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcc
Confidence 123456778886 467899999999999999999999999864 23 899999964221
Q ss_pred hhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccccccccc
Q 046057 1004 RIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDV 1083 (1198)
Q Consensus 1004 ~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~ 1083 (1198)
...+.++++++++++. ++|.|+|..+.+.+..+|+.||++++||..|+||++++|||++|+|+|+++.||++|++.++
T Consensus 267 ~~~~~l~~~~~~~~l~--~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~ 344 (405)
T TIGR03449 267 ATPDALIELAAELGIA--DRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADG 344 (405)
T ss_pred hHHHHHHHHHHHcCCC--ceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccC
Confidence 2456788999998884 78999999988899999999999999999999999999999999999999999999999887
Q ss_pred ccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhc
Q 046057 1084 DHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYD 1163 (1198)
Q Consensus 1084 d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~ 1163 (1198)
.+|++++++|+++++++|. ++ .+
T Consensus 345 -------------~~g~~~~~~d~~~la~~i~----------------------------------------~~----l~ 367 (405)
T TIGR03449 345 -------------ETGLLVDGHDPADWADALA----------------------------------------RL----LD 367 (405)
T ss_pred -------------CceEECCCCCHHHHHHHHH----------------------------------------HH----Hh
Confidence 8899999999999997766 43 35
Q ss_pred CHHHHHHHHHHHH--HhcCChHHHHHHHHHHHHHHhC
Q 046057 1164 GREWLNSLCKTVM--EQDWSWNRPALDYMELYRAARK 1198 (1198)
Q Consensus 1164 ~~e~~~~L~~~am--~qdfSW~~~A~~yielY~~a~K 1198 (1198)
+++.+.+++.++. .+.|||+.++++|+++|+++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 368 DPRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 6777777777663 3579999999999999998764
No 13
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=5.1e-38 Score=386.60 Aligned_cols=403 Identities=16% Similarity=0.159 Sum_probs=280.5
Q ss_pred CCcEEEEEccccC----CC---CCCCcHHHHHHHHHHHH--------HhCCC----eEEEEeeCCCCCcccccccccccc
Q 046057 708 PPMHIVHIAVEMA----PI---AKVGGLGDVVTSLSRTV--------QDLNH----NVDIILPKYDCLKFSDVKDLGYNR 768 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~----P~---akvGGl~~vV~~LarAL--------~~~GH----~V~VItP~y~~~~~~~~~~l~~~~ 768 (1198)
..|||++|+...+ |. ..+||...||.+|+++| +++|| +|.|+|...+... -..+....
T Consensus 254 ~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~---~~~~~~~~ 330 (784)
T TIGR02470 254 MVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAE---GTTCNQRL 330 (784)
T ss_pred ccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcc---cccccccc
Confidence 4589999999873 21 12799999999999985 69999 7779986533211 00110110
Q ss_pred cccCCCceeEEeeceecCeEEEEeCCCC-------CccccccccCCCCchhhHHHHHHHHHHHHH-hcCCCceEEEECCC
Q 046057 769 SYHWGGTEIKVWFGKVEGLSVYFLEPQN-------GFFSKGCVYGCNNDKERFAFFCHAALEFLL-QGGFHPDIIHCHDW 840 (1198)
Q Consensus 769 ~~~~g~~~i~V~~~~~~Gv~v~~l~~~~-------~~f~rg~iYg~~dd~~Rf~~F~~aale~L~-~~~~~PDVIH~Hdw 840 (1198)
....+ .+|+.+..++... .+..+..++ -...-|+..+.+.+. ..+.+|||||+|.|
T Consensus 331 e~~~~----------~~~~~I~rvp~g~~~~~~~~~~i~k~~l~------p~l~~f~~~~~~~~~~~~~~~pDlIHahy~ 394 (784)
T TIGR02470 331 EKVYG----------TEHAWILRVPFRTENGIILRNWISRFEIW------PYLETFAEDAEKEILAELQGKPDLIIGNYS 394 (784)
T ss_pred ccccC----------CCceEEEEecCCCCcccccccccCHHHHH------HHHHHHHHHHHHHHHHhcCCCCCEEEECCC
Confidence 01111 1233443333110 011111111 112345566666554 33568999999999
Q ss_pred ChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhh---------------hH------HHHHHhccCEEEEeCHHHHH---
Q 046057 841 SSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGT---------------HH------IGKAMTYADKATTVSHTYSK--- 896 (1198)
Q Consensus 841 ~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~---------------~l------i~~~~~~AD~VitVS~~~a~--- 896 (1198)
.+++++.+++... ++|.|+|.|.+.... ++ ...++..||.|||.|..-..
T Consensus 395 d~glva~lla~~l------gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~ 468 (784)
T TIGR02470 395 DGNLVASLLARKL------GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTK 468 (784)
T ss_pred chHHHHHHHHHhc------CCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhh
Confidence 9999999888776 899999999774310 11 12567889999999974322
Q ss_pred -HHhC---CC------C------CCCCCCcEEEEeCCCCCCCCCCCCCCC--CCcccccchhhhchHHHHHHHHHHhCCC
Q 046057 897 -EVAG---DP------A------IAPHLHKFYGILNGIDQDMWDPFNDKF--IPVSYTSENLVEGKRAAKEALQQKVGLR 958 (1198)
Q Consensus 897 -el~~---~~------~------l~~~~~K~~vI~NGID~d~~~P~~D~~--Lp~~ys~~~~~~gk~~~k~aLrq~lGL~ 958 (1198)
.+.. +. . +.....|+.+|++|+|.+.|.|..+.. +.. . ..-++..--++..+++.+|+.
T Consensus 469 ~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~-~--~~~ie~ll~~~~~~~~~~G~l 545 (784)
T TIGR02470 469 DSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTN-L--HPEIEELLFSLEDNDEHYGYL 545 (784)
T ss_pred hhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhh-h--hcchhhhccchhhHHHHhCCC
Confidence 1110 00 1 112456899999999999888743210 000 0 000000111344567888874
Q ss_pred -CCCCcEEEEEecCCCccCHHHHHHHHHHhh--cCCcEEEEEecCCCh------h---hHHHHHHHHHHhCCCCCCcEEE
Q 046057 959 -KSDLPLVGIITRLTHQKGIHLIKHAIWRTL--DRGGQVVLLGSAPDP------R---IQNDFVNLANELHSSHADRARL 1026 (1198)
Q Consensus 959 -~~d~plIg~VGRL~~qKGidlIleAl~~ll--~~~~qLVIvGsgpdp------~---i~~~L~~la~eLgl~~~drV~f 1026 (1198)
++++|+|+++|||+++||++.+++|+.++. ..+++|||+|++++. + ....+.++++++++. ++|+|
T Consensus 546 ~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~--g~V~f 623 (784)
T TIGR02470 546 KDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLH--GQIRW 623 (784)
T ss_pred CCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCC--CeEEE
Confidence 468899999999999999999999998763 346899999986431 1 335678889999984 89999
Q ss_pred EccC-ChHHHHHHHH----HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEE
Q 046057 1027 CLTY-DEPLSHLIYA----GADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFS 1101 (1198)
Q Consensus 1027 ~g~~-d~~~l~~iyA----~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~l 1101 (1198)
+|.. +......+|+ ++|++|+||++||||++++|||+||+|||+|++||++|+|.++ .+|++
T Consensus 624 lG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg-------------~tGfL 690 (784)
T TIGR02470 624 IGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDG-------------VSGFH 690 (784)
T ss_pred ccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCC-------------CcEEE
Confidence 9864 4333344443 4589999999999999999999999999999999999999997 89999
Q ss_pred EcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHH---Hh
Q 046057 1102 FDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVM---EQ 1178 (1198)
Q Consensus 1102 f~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am---~q 1178 (1198)
|++.|+++++.+|. ++++.+..+++.|++++++++ .+
T Consensus 691 Vdp~D~eaLA~aL~----------------------------------------~ll~kll~dp~~~~~ms~~a~~rV~~ 730 (784)
T TIGR02470 691 IDPYHGEEAAEKIV----------------------------------------DFFEKCDEDPSYWQKISQGGLQRIYE 730 (784)
T ss_pred eCCCCHHHHHHHHH----------------------------------------HHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 99999999999988 777777789999999999985 47
Q ss_pred cCChHHHHHHHHHHH
Q 046057 1179 DWSWNRPALDYMELY 1193 (1198)
Q Consensus 1179 dfSW~~~A~~yielY 1193 (1198)
+|||+..+++|+.+.
T Consensus 731 ~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 731 KYTWKIYSERLLTLA 745 (784)
T ss_pred hCCHHHHHHHHHHHH
Confidence 899999999999875
No 14
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=9.9e-38 Score=390.30 Aligned_cols=415 Identities=17% Similarity=0.163 Sum_probs=286.2
Q ss_pred CCCCcEEEEEccccCC---------CCCCCcHHHHHHHHHHHHHhCC--CeEEEEeeCCCCCccccccccccccccc-C-
Q 046057 706 KEPPMHIVHIAVEMAP---------IAKVGGLGDVVTSLSRTVQDLN--HNVDIILPKYDCLKFSDVKDLGYNRSYH-W- 772 (1198)
Q Consensus 706 ~e~pMKIL~Vs~e~~P---------~akvGGl~~vV~~LarAL~~~G--H~V~VItP~y~~~~~~~~~~l~~~~~~~-~- 772 (1198)
++++|+|+||+..-.| .+.+||...||..|+++|+++| |+|+|+|.......... ......... .
T Consensus 166 ~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~--~y~~p~e~~~~~ 243 (1050)
T TIGR02468 166 KEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDW--SYGEPTEMLTPR 243 (1050)
T ss_pred ccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCcccccc--ccCCcccccccc
Confidence 3567899998865443 2348999999999999999999 99999997643211000 000000000 0
Q ss_pred CCceeEEeeceecCeEEEEeCCCC--CccccccccCCCCchhhHHHHHHHHHHHHHh------------cCCCceEEEEC
Q 046057 773 GGTEIKVWFGKVEGLSVYFLEPQN--GFFSKGCVYGCNNDKERFAFFCHAALEFLLQ------------GGFHPDIIHCH 838 (1198)
Q Consensus 773 g~~~i~V~~~~~~Gv~v~~l~~~~--~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~------------~~~~PDVIH~H 838 (1198)
............+|+.++.++... .+.....+ .-...-|...+++++.+ .+..|||||+|
T Consensus 244 ~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L------~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaH 317 (1050)
T TIGR02468 244 SSENDGDEMGESSGAYIIRIPFGPRDKYIPKEEL------WPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGH 317 (1050)
T ss_pred ccccccccccCCCCeEEEEeccCCCCCCcCHHHH------HHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEEC
Confidence 000000111233577777665321 12221111 12334566777776653 11249999999
Q ss_pred CCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhh-------------------------hHHHHHHhccCEEEEeCHH
Q 046057 839 DWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGT-------------------------HHIGKAMTYADKATTVSHT 893 (1198)
Q Consensus 839 dw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~-------------------------~li~~~~~~AD~VitVS~~ 893 (1198)
+|.++.++.+++..+ ++|+|+|.|.+.-.. ......+..||.|||+|+.
T Consensus 318 yw~sG~aa~~L~~~l------gVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~q 391 (1050)
T TIGR02468 318 YADAGDSAALLSGAL------NVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQ 391 (1050)
T ss_pred cchHHHHHHHHHHhh------CCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHH
Confidence 999999999998876 899999999763211 1123467899999999999
Q ss_pred HHHHHhCC-CC-------------------CCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccch-hhhchHHHHHHHH
Q 046057 894 YSKEVAGD-PA-------------------IAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSEN-LVEGKRAAKEALQ 952 (1198)
Q Consensus 894 ~a~el~~~-~~-------------------l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~-~~~gk~~~k~aLr 952 (1198)
..+++... .. ++....++.+||||||++.|.|.....-......+. .....+.....++
T Consensus 392 E~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 471 (1050)
T TIGR02468 392 EIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIM 471 (1050)
T ss_pred HHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHH
Confidence 98875421 10 111134899999999999998843110000000000 0000011122333
Q ss_pred HHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--C--CcEEEEEecCCCh--------hhHHHHHHHHHHhCCCC
Q 046057 953 QKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--R--GGQVVLLGSAPDP--------RIQNDFVNLANELHSSH 1020 (1198)
Q Consensus 953 q~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~--~~qLVIvGsgpdp--------~i~~~L~~la~eLgl~~ 1020 (1198)
+.+ .. ++.|+|+++||+.++||++.|++|+..+.. . ++. +|+|++++. .....+..+++++++.
T Consensus 472 r~~-~~-pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~- 547 (1050)
T TIGR02468 472 RFF-TN-PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLY- 547 (1050)
T ss_pred hhc-cc-CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCC-
Confidence 333 33 578999999999999999999999998863 2 444 456876432 1235678889999984
Q ss_pred CCcEEEEccCChHHHHHHHHHc----cEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCC
Q 046057 1021 ADRARLCLTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLE 1096 (1198)
Q Consensus 1021 ~drV~f~g~~d~~~l~~iyA~A----Di~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~ 1096 (1198)
++|.|+|..+.+.+..+|+.| |+||+||++||||++++|||+||+|||+|++||+.|+|.++
T Consensus 548 -g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g------------- 613 (1050)
T TIGR02468 548 -GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVL------------- 613 (1050)
T ss_pred -CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccC-------------
Confidence 789999988888899999988 69999999999999999999999999999999999999987
Q ss_pred CcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHH
Q 046057 1097 PNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVM 1176 (1198)
Q Consensus 1097 ~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am 1176 (1198)
.||++|++.|+++|+.+|. .++++++.+.+|++++.
T Consensus 614 ~nGlLVdP~D~eaLA~AL~--------------------------------------------~LL~Dpelr~~m~~~gr 649 (1050)
T TIGR02468 614 DNGLLVDPHDQQAIADALL--------------------------------------------KLVADKQLWAECRQNGL 649 (1050)
T ss_pred CcEEEECCCCHHHHHHHHH--------------------------------------------HHhhCHHHHHHHHHHHH
Confidence 8999999999999995555 45578888888988873
Q ss_pred --HhcCChHHHHHHHHHHHHHH
Q 046057 1177 --EQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1177 --~qdfSW~~~A~~yielY~~a 1196 (1198)
.+.|+|+.++.+|+++|...
T Consensus 650 ~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 650 KNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred HHHHHCCHHHHHHHHHHHHHHH
Confidence 35799999999999999865
No 15
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=2.6e-37 Score=353.32 Aligned_cols=362 Identities=25% Similarity=0.343 Sum_probs=269.4
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
|||++|+..|+|. ..||.+.++..|+++|+++ |+|+|++..... ....|+.+
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~--------------------------~~~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQR--------------------------FDSEGLTV 52 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCch--------------------------hcCCCeEE
Confidence 8999999999885 4699999999999999987 888888743111 01133444
Q ss_pred EEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecC
Q 046057 790 YFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHN 869 (1198)
Q Consensus 790 ~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn 869 (1198)
+.+.....+. . . .. .+..+... +. +.....+|||||+|+|..++.+.+++... ++|+|+++|+
T Consensus 53 ~~~~~~~~~~-~-----~-~~--~~~~~~~~-~~-~~~~~~~~divh~~~~~~~~~~~~~~~~~------~~p~v~~~h~ 115 (388)
T TIGR02149 53 KGYRPWSELK-E-----A-NK--ALGTFSVD-LA-MANDPVDADVVHSHTWYTFLAGHLAKKLY------DKPLVVTAHS 115 (388)
T ss_pred EEecChhhcc-c-----h-hh--hhhhhhHH-HH-HhhCCCCCCeEeecchhhhhHHHHHHHhc------CCCEEEEeec
Confidence 4333211100 0 0 00 01011111 11 11222479999999988877776655432 8999999998
Q ss_pred Cchh---------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcc
Q 046057 870 LEFG---------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVS 934 (1198)
Q Consensus 870 ~~~~---------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ 934 (1198)
.... ..+.+..+..+|.++++|+.+.+.+.... .+....++.+|+||+|.+.|.|.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~-~~~~~~~i~vi~ng~~~~~~~~~-------- 186 (388)
T TIGR02149 116 LEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKYY-PDLDPEKVHVIYNGIDTKEYKPD-------- 186 (388)
T ss_pred ccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHHc-CCCCcceEEEecCCCChhhcCCC--------
Confidence 7421 11334567889999999999988886321 12345689999999999887652
Q ss_pred cccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCC-hhhHHHHHHHH
Q 046057 935 YTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPD-PRIQNDFVNLA 1013 (1198)
Q Consensus 935 ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpd-p~i~~~L~~la 1013 (1198)
.+..++++++++ ++.++|+++||+.+.||++.+++|+..+. ++++|+++|++++ +.+.+.+++++
T Consensus 187 ------------~~~~~~~~~~~~-~~~~~i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~ 252 (388)
T TIGR02149 187 ------------DGNVVLDRYGID-RSRPYILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAV 252 (388)
T ss_pred ------------chHHHHHHhCCC-CCceEEEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHH
Confidence 123567888886 47789999999999999999999999874 5788999887654 34556777777
Q ss_pred HHhCCCCCCcEEEEc-cCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhc
Q 046057 1014 NELHSSHADRARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQA 1092 (1198)
Q Consensus 1014 ~eLgl~~~drV~f~g-~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~ 1092 (1198)
.+++.. .+++.+++ .++.+.+..+|++||++|+||.+|+||++++|||+||+|||+++.||.+|++.++
T Consensus 253 ~~~~~~-~~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~--------- 322 (388)
T TIGR02149 253 ALLDRN-RTGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDG--------- 322 (388)
T ss_pred HHhccc-cCceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCC---------
Confidence 777653 24577665 5788889999999999999999999999999999999999999999999999986
Q ss_pred cCCCCcEEEEcCCCH------HHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHH
Q 046057 1093 LDLEPNGFSFDGADI------AGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGRE 1166 (1198)
Q Consensus 1093 ~~~~~nG~lf~~~D~------~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e 1166 (1198)
.+|+++++.|+ ++|+ .+|..+.++++
T Consensus 323 ----~~G~~~~~~~~~~~~~~~~l~--------------------------------------------~~i~~l~~~~~ 354 (388)
T TIGR02149 323 ----ETGFLVPPDNSDADGFQAELA--------------------------------------------KAINILLADPE 354 (388)
T ss_pred ----CceEEcCCCCCcccchHHHHH--------------------------------------------HHHHHHHhCHH
Confidence 78999998887 6666 55556667888
Q ss_pred HHHHHHHHHH---HhcCChHHHHHHHHHHHHHHh
Q 046057 1167 WLNSLCKTVM---EQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1167 ~~~~L~~~am---~qdfSW~~~A~~yielY~~a~ 1197 (1198)
.+.+|+.++. .+.|||+.++++|.++|++++
T Consensus 355 ~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 355 LAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 8888888873 467999999999999999874
No 16
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=5.1e-36 Score=355.65 Aligned_cols=359 Identities=18% Similarity=0.262 Sum_probs=261.4
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecC
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEG 786 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~G 786 (1198)
.+||||++++. ..|....||.+..+..|+++|.++||+|+|+++.... .. . ..|
T Consensus 56 ~~~mrI~~~~~-~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~-~~-~-----------------------~~g 109 (465)
T PLN02871 56 SRPRRIALFVE-PSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV-PQ-E-----------------------FHG 109 (465)
T ss_pred CCCceEEEEEC-CcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC-Cc-c-----------------------ccC
Confidence 67899999974 4444568999999999999999999999999975321 00 0 011
Q ss_pred eEEEEeCCC-CCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChh-HHHHHHHHhhhhcCCCCCeEE
Q 046057 787 LSVYFLEPQ-NGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSA-PVAWLFKDHYVHYGLSKARIV 864 (1198)
Q Consensus 787 v~v~~l~~~-~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta-~va~llk~~y~~~gl~~ipvV 864 (1198)
+.++.+... ..++.. . ...+. +...+..++++ .+|||||+|+.... +.+.++.... ++|+|
T Consensus 110 ~~v~~~~~~~~~~~~~--~------~~~~~-~~~~l~~~i~~--~kpDiIh~~~~~~~~~~~~~~ak~~------~ip~V 172 (465)
T PLN02871 110 AKVIGSWSFPCPFYQK--V------PLSLA-LSPRIISEVAR--FKPDLIHASSPGIMVFGALFYAKLL------CVPLV 172 (465)
T ss_pred ceeeccCCcCCccCCC--c------eeecc-CCHHHHHHHHh--CCCCEEEECCCchhHHHHHHHHHHh------CCCEE
Confidence 111100000 000000 0 00010 11123444554 48999999985432 2333333332 78999
Q ss_pred EEecCCchh--------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCC
Q 046057 865 FTIHNLEFG--------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKF 930 (1198)
Q Consensus 865 ~tIHn~~~~--------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~ 930 (1198)
+++|+.... ..+++.....+|.++++|+...+.+.... .....++.+|+||||.+.|.|..+
T Consensus 173 ~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~--~~~~~kv~vi~nGvd~~~f~p~~~-- 248 (465)
T PLN02871 173 MSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEAAG--VTAANRIRVWNKGVDSESFHPRFR-- 248 (465)
T ss_pred EEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHcC--CCCcCeEEEeCCccCccccCCccc--
Confidence 999985321 01234455789999999999999987432 123468999999999998876321
Q ss_pred CCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHH
Q 046057 931 IPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFV 1010 (1198)
Q Consensus 931 Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~ 1010 (1198)
+..+++++....++.++|+++||+.++||++.+++|+..+ ++++|+|+|+|+ ..+.++
T Consensus 249 -----------------~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~---~~~~l~ 306 (465)
T PLN02871 249 -----------------SEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP---YREELE 306 (465)
T ss_pred -----------------cHHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh---HHHHHH
Confidence 1223444433224678999999999999999999999876 489999999985 356677
Q ss_pred HHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccc---cccch
Q 046057 1011 NLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD---VDHDK 1087 (1198)
Q Consensus 1011 ~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d---~d~~~ 1087 (1198)
+++.. .+|.|+|..+.+++..+|+.||++|+||..|+||++++|||+||+|+|+++.||+.|+|.+ +
T Consensus 307 ~~~~~------~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~---- 376 (465)
T PLN02871 307 KMFAG------TPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEG---- 376 (465)
T ss_pred HHhcc------CCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCC----
Confidence 66652 4699999998889999999999999999999999999999999999999999999999987 5
Q ss_pred hhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHH
Q 046057 1088 ERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREW 1167 (1198)
Q Consensus 1088 ~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~ 1167 (1198)
.+|++|+++|+++|+++|. .+.++++.
T Consensus 377 ---------~~G~lv~~~d~~~la~~i~--------------------------------------------~ll~~~~~ 403 (465)
T PLN02871 377 ---------KTGFLYTPGDVDDCVEKLE--------------------------------------------TLLADPEL 403 (465)
T ss_pred ---------CceEEeCCCCHHHHHHHHH--------------------------------------------HHHhCHHH
Confidence 8999999999999995555 44567888
Q ss_pred HHHHHHHH--HHhcCChHHHHHHHHH-HHHHHh
Q 046057 1168 LNSLCKTV--MEQDWSWNRPALDYME-LYRAAR 1197 (1198)
Q Consensus 1168 ~~~L~~~a--m~qdfSW~~~A~~yie-lY~~a~ 1197 (1198)
+.+|++++ ..+.|+|+.+++++++ +|++++
T Consensus 404 ~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~ 436 (465)
T PLN02871 404 RERMGAAAREEVEKWDWRAATRKLRNEQYSAAI 436 (465)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 88888877 3367999999999998 799875
No 17
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=3.8e-36 Score=348.77 Aligned_cols=357 Identities=20% Similarity=0.195 Sum_probs=257.9
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+..+.|. .||.++++..|+++|+++||+|.|+++.++..... .....|++++
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---------------------~~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI---------------------RYLTNGLKVY 57 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc---------------------ccccCceeEE
Confidence 799999999994 89999999999999999999999999764321000 0012345555
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHH--HHHHHHhhhhcCCCCCeEEEEec
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPV--AWLFKDHYVHYGLSKARIVFTIH 868 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~v--a~llk~~y~~~gl~~ipvV~tIH 868 (1198)
.++... .. .... ..++..+...+...+.+ .+|||||+|++...+. +.++... .++|+|+|.|
T Consensus 58 ~~p~~~-~~-~~~~------~~~~~~~~~~l~~~~~~--~~~DiIh~~~~~~~~~~~~~~~~~~------~~~~~v~t~h 121 (398)
T cd03796 58 YLPFVV-FY-NQST------LPTFFGTFPLLRNILIR--ERITIVHGHQAFSALAHEALLHART------MGLKTVFTDH 121 (398)
T ss_pred Eeccee-cc-CCcc------ccchhhhHHHHHHHHHh--cCCCEEEECCCCchHHHHHHHHhhh------cCCcEEEEec
Confidence 554221 10 0000 00111122333344443 4899999998665432 3333322 2789999999
Q ss_pred CCchh--------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchh
Q 046057 869 NLEFG--------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENL 940 (1198)
Q Consensus 869 n~~~~--------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~ 940 (1198)
+.... ...++..+..+|.++++|+...+.+.... .....++.+||||+|.+.|.|..+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--~~~~~k~~vi~ngvd~~~f~~~~~~----------- 188 (398)
T cd03796 122 SLFGFADASSIHTNKLLRFSLADVDHVICVSHTSKENTVLRA--SLDPERVSVIPNAVDSSDFTPDPSK----------- 188 (398)
T ss_pred ccccccchhhHHhhHHHHHhhccCCEEEEecHhHhhHHHHHh--CCChhhEEEEcCccCHHHcCCCccc-----------
Confidence 85321 22344556889999999999887543211 2345689999999999888763221
Q ss_pred hhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCC
Q 046057 941 VEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHS 1018 (1198)
Q Consensus 941 ~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl 1018 (1198)
. .++.++|+++||+.++||++.+++|+..+.+ ++++|+|+|.|+ ..+.++++++++++
T Consensus 189 ----------------~-~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~---~~~~l~~~~~~~~l 248 (398)
T cd03796 189 ----------------R-DNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP---KRILLEEMREKYNL 248 (398)
T ss_pred ----------------C-CCCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc---hHHHHHHHHHHhCC
Confidence 0 1356799999999999999999999988864 479999999985 35778999999988
Q ss_pred CCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCc
Q 046057 1019 SHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPN 1098 (1198)
Q Consensus 1019 ~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~n 1098 (1198)
. ++|.|+|.++.+.+..+|++||++|+||.+|+||++++|||+||+|||++++||++|++.++ .
T Consensus 249 ~--~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~--------------~ 312 (398)
T cd03796 249 Q--DRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD--------------M 312 (398)
T ss_pred C--CeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC--------------c
Confidence 4 78999999998999999999999999999999999999999999999999999999999764 3
Q ss_pred EEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHh
Q 046057 1099 GFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQ 1178 (1198)
Q Consensus 1099 G~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~q 1178 (1198)
++++ +.|+++|+++|. +++......... ..-.++...+
T Consensus 313 ~~~~-~~~~~~l~~~l~----------------------------------------~~l~~~~~~~~~-~~~~~~~~~~ 350 (398)
T cd03796 313 ILLA-EPDVESIVRKLE----------------------------------------EAISILRTGKHD-PWSFHNRVKK 350 (398)
T ss_pred eeec-CCCHHHHHHHHH----------------------------------------HHHhChhhhhhH-HHHHHHHHHh
Confidence 4444 458999998888 555432211111 1112222567
Q ss_pred cCChHHHHHHHHHHHHHHh
Q 046057 1179 DWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1179 dfSW~~~A~~yielY~~a~ 1197 (1198)
.|||+.++++|+++|+.++
T Consensus 351 ~fs~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 351 MYSWEDVAKRTEKVYDRIL 369 (398)
T ss_pred hCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999876
No 18
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.2e-35 Score=345.36 Aligned_cols=374 Identities=17% Similarity=0.161 Sum_probs=273.6
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC--CCCCcccccccccccccccCCCceeEEeeceecCe
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK--YDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGL 787 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~--y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv 787 (1198)
|||++|+..|.|. .||.+.++..|+++|.++||+|+|+|+. |....... ...+. .......+|+
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~----------~~~~~--~~~~~~~~~i 66 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGE----------GYSAW--RYRRESEGGV 66 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCc----------ccccc--cceeeecCCe
Confidence 8999999999884 7999999999999999999999999965 21110000 00000 0111224677
Q ss_pred EEEEeCCCCCccccccccCCCCchhh---HHHHHHHH-HHHHHhcCCCceEEEECCCC--hhHHHHHHHHhhhhcCCCCC
Q 046057 788 SVYFLEPQNGFFSKGCVYGCNNDKER---FAFFCHAA-LEFLLQGGFHPDIIHCHDWS--SAPVAWLFKDHYVHYGLSKA 861 (1198)
Q Consensus 788 ~v~~l~~~~~~f~rg~iYg~~dd~~R---f~~F~~aa-le~L~~~~~~PDVIH~Hdw~--ta~va~llk~~y~~~gl~~i 861 (1198)
+++.++.... .. .....| +..|.... ..+++....+|||||+|.+. +++++.+++..+ ++
T Consensus 67 ~v~r~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~------~~ 132 (412)
T PRK10307 67 TVWRCPLYVP--KQ------PSGLKRLLHLGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLS------GA 132 (412)
T ss_pred EEEEccccCC--CC------ccHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhh------CC
Confidence 7776642100 00 011111 11222222 22233323689999999754 244455555443 78
Q ss_pred eEEEEecCCchh-----------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCC
Q 046057 862 RIVFTIHNLEFG-----------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWD 924 (1198)
Q Consensus 862 pvV~tIHn~~~~-----------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~ 924 (1198)
|+|+++|+.... ..+.+..+..+|.++++|+...+.+... .....++.+|+||+|.+.|.
T Consensus 133 ~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~---~~~~~~i~vi~ngvd~~~~~ 209 (412)
T PRK10307 133 RTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREK---GVAAEKVIFFPNWSEVARFQ 209 (412)
T ss_pred CEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHc---CCCcccEEEECCCcCHhhcC
Confidence 999999986421 1123455678999999999999988642 34567899999999998876
Q ss_pred CCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc-CCcEEEEEecCCCh
Q 046057 925 PFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD-RGGQVVLLGSAPDP 1003 (1198)
Q Consensus 925 P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~-~~~qLVIvGsgpdp 1003 (1198)
|..+ ..+..++++++++ ++.++|+|+||+.+.||++.|++|+..+.+ ++++|+|+|+|+.
T Consensus 210 ~~~~-----------------~~~~~~~~~~~~~-~~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~~- 270 (412)
T PRK10307 210 PVAD-----------------ADVDALRAQLGLP-DGKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGGG- 270 (412)
T ss_pred CCCc-----------------cchHHHHHHcCCC-CCCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCChh-
Confidence 5211 1133567788887 466899999999999999999999988754 3699999999863
Q ss_pred hhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCC----cHHHHHHHHhCCcEEEeCCcc--cc
Q 046057 1004 RIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPC----GLTQLVAMRYGSIPVVRKTGG--LY 1077 (1198)
Q Consensus 1004 ~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~Epf----GLt~LEAMa~G~PvIvt~tGG--l~ 1077 (1198)
.+.++++++++++ ++|+|+|.++.+.+..+|+.||++|+||..|++ |..++|||+||+|||+++.|| +.
T Consensus 271 --~~~l~~~~~~~~l---~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~ 345 (412)
T PRK10307 271 --KARLEKMAQCRGL---PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELG 345 (412)
T ss_pred --HHHHHHHHHHcCC---CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHH
Confidence 5778889998887 369999999999999999999999999999985 556799999999999999887 35
Q ss_pred ccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHH
Q 046057 1078 DTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRA 1157 (1198)
Q Consensus 1078 E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA 1157 (1198)
+++. .+|++++++|+++|+++|.
T Consensus 346 ~~i~---------------~~G~~~~~~d~~~la~~i~------------------------------------------ 368 (412)
T PRK10307 346 QLVE---------------GIGVCVEPESVEALVAAIA------------------------------------------ 368 (412)
T ss_pred HHHh---------------CCcEEeCCCCHHHHHHHHH------------------------------------------
Confidence 6664 3699999999999995555
Q ss_pred HHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHHHHHHHHHh
Q 046057 1158 ISAYYDGREWLNSLCKTV---MEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1158 I~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~yielY~~a~ 1197 (1198)
.+.++++.+.+|++++ ..+.|||+.++++|+++|++++
T Consensus 369 --~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 369 --ALARQALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred --HHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 4456788888888887 4568999999999999999875
No 19
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.1e-35 Score=334.02 Aligned_cols=358 Identities=21% Similarity=0.246 Sum_probs=264.7
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
|||++++ .| ..||.++++..|+++|+++||+|+|++...+..... ...++.+
T Consensus 1 mki~~~~---~p--~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~-----------------------~~~~~~~ 52 (371)
T cd04962 1 MKIGIVC---YP--TYGGSGVVATELGKALARRGHEVHFITSSRPFRLDE-----------------------YSPNIFF 52 (371)
T ss_pred CceeEEE---Ee--CCCCccchHHHHHHHHHhcCCceEEEecCCCcchhh-----------------------hccCeEE
Confidence 8999997 35 479999999999999999999999998642210000 0011111
Q ss_pred EEeCCCC-CccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEec
Q 046057 790 YFLEPQN-GFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIH 868 (1198)
Q Consensus 790 ~~l~~~~-~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIH 868 (1198)
+.++... ..+.. . .........+.+++.+ .+|||||+|.+.....+.++..... +..++|+|+++|
T Consensus 53 ~~~~~~~~~~~~~------~---~~~~~~~~~l~~~i~~--~~~divh~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~h 119 (371)
T cd04962 53 HEVEVPQYPLFQY------P---PYDLALASKIAEVAKR--YKLDLLHVHYAVPHAVAAYLAREIL--GKKDLPVVTTLH 119 (371)
T ss_pred EEecccccchhhc------c---hhHHHHHHHHHHHHhc--CCccEEeecccCCccHHHHHHHHhc--CcCCCcEEEEEc
Confidence 1111100 00000 0 0011223445555554 4899999998665444433332221 113789999999
Q ss_pred CCchh--------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchh
Q 046057 869 NLEFG--------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENL 940 (1198)
Q Consensus 869 n~~~~--------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~ 940 (1198)
+.... ..+++..+..+|.++++|+...+.+... + ....++.+|+||+|...+.|..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--~-~~~~~i~vi~n~~~~~~~~~~~------------- 183 (371)
T cd04962 120 GTDITLVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYEL--F-DITKEIEVIPNFVDEDRFRPKP------------- 183 (371)
T ss_pred CCccccccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHh--c-CCcCCEEEecCCcCHhhcCCCc-------------
Confidence 75432 3455677889999999999999888642 2 2346899999999987665421
Q ss_pred hhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC-CcEEEEEecCCChhhHHHHHHHHHHhCCC
Q 046057 941 VEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR-GGQVVLLGSAPDPRIQNDFVNLANELHSS 1019 (1198)
Q Consensus 941 ~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~-~~qLVIvGsgpdp~i~~~L~~la~eLgl~ 1019 (1198)
+...+++++++ .+.++++++||+.+.||++.+++|+..+.+. +++|+++|.+++ ...+++++.++++
T Consensus 184 -------~~~~~~~~~~~-~~~~~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~- 251 (371)
T cd04962 184 -------DEALKRRLGAP-EGEKVLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGPE---RSPAERLARELGL- 251 (371)
T ss_pred -------hHHHHHhcCCC-CCCeEEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCcC---HHHHHHHHHHcCC-
Confidence 12345667776 4678999999999999999999999988653 789999999864 4678888888887
Q ss_pred CCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcE
Q 046057 1020 HADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNG 1099 (1198)
Q Consensus 1020 ~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG 1099 (1198)
.++|.|+|..+ .+..+|+.||++|+||.+|+||++++|||++|+|+|+++.||++|++.++ .+|
T Consensus 252 -~~~v~~~g~~~--~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~-------------~~G 315 (371)
T cd04962 252 -QDDVLFLGKQD--HVEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHG-------------ETG 315 (371)
T ss_pred -CceEEEecCcc--cHHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCC-------------Cce
Confidence 47899998654 47899999999999999999999999999999999999999999999987 799
Q ss_pred EEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHH---
Q 046057 1100 FSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVM--- 1176 (1198)
Q Consensus 1100 ~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am--- 1176 (1198)
+++++.|+++++++|. .+.++++.+.+|++++.
T Consensus 316 ~~~~~~~~~~l~~~i~--------------------------------------------~l~~~~~~~~~~~~~~~~~~ 351 (371)
T cd04962 316 FLVDVGDVEAMAEYAL--------------------------------------------SLLEDDELWQEFSRAARNRA 351 (371)
T ss_pred EEcCCCCHHHHHHHHH--------------------------------------------HHHhCHHHHHHHHHHHHHHH
Confidence 9999999999995554 44467888788887773
Q ss_pred HhcCChHHHHHHHHHHHHHH
Q 046057 1177 EQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1177 ~qdfSW~~~A~~yielY~~a 1196 (1198)
.+.|||+.++.+|.++|+++
T Consensus 352 ~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 352 AERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHhCCHHHHHHHHHHHHHhC
Confidence 56899999999999999864
No 20
>PLN00142 sucrose synthase
Probab=100.00 E-value=1.2e-35 Score=365.72 Aligned_cols=402 Identities=17% Similarity=0.140 Sum_probs=274.4
Q ss_pred CcEEEEEccccC-------CCCCCCcHHHHHHHHH--------HHHHhCCCeEE----EEeeCCCCCccccccccccccc
Q 046057 709 PMHIVHIAVEMA-------PIAKVGGLGDVVTSLS--------RTVQDLNHNVD----IILPKYDCLKFSDVKDLGYNRS 769 (1198)
Q Consensus 709 pMKIL~Vs~e~~-------P~akvGGl~~vV~~La--------rAL~~~GH~V~----VItP~y~~~~~~~~~~l~~~~~ 769 (1198)
-|+|++|+..-+ ....+||.-.||.+|+ ++|+++||+|+ |+|...+... -..+.....
T Consensus 279 ~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~---~~~~~~~~e 355 (815)
T PLN00142 279 VFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAK---GTTCNQRLE 355 (815)
T ss_pred hHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCcc---CCcccCcce
Confidence 357777765542 1124799998997655 67778999875 8886432111 011111000
Q ss_pred ccCCCceeEEeeceecCeEEEEeCCCC------CccccccccCCCCchhhHHHHHHHHHHHH-HhcCCCceEEEECCCCh
Q 046057 770 YHWGGTEIKVWFGKVEGLSVYFLEPQN------GFFSKGCVYGCNNDKERFAFFCHAALEFL-LQGGFHPDIIHCHDWSS 842 (1198)
Q Consensus 770 ~~~g~~~i~V~~~~~~Gv~v~~l~~~~------~~f~rg~iYg~~dd~~Rf~~F~~aale~L-~~~~~~PDVIH~Hdw~t 842 (1198)
...+ .+|+.+..++... .+..+..++. -..-|+..+.+.+ ...+..|||||+|.|.+
T Consensus 356 ~v~~----------~~~~~I~rvP~g~~~~~l~~~i~ke~l~p------~L~~f~~~~~~~~~~~~~~~PDlIHaHYwds 419 (815)
T PLN00142 356 KVSG----------TEHSHILRVPFRTEKGILRKWISRFDVWP------YLETFAEDAASEILAELQGKPDLIIGNYSDG 419 (815)
T ss_pred eccC----------CCceEEEecCCCCCccccccccCHHHHHH------HHHHHHHHHHHHHHHhcCCCCCEEEECCccH
Confidence 1111 1233333333210 0111111111 1224555666555 34556899999999999
Q ss_pred hHHHHHHHHhhhhcCCCCCeEEEEecCCchhh---------------h----H--HHHHHhccCEEEEeCHHHHHHHh--
Q 046057 843 APVAWLFKDHYVHYGLSKARIVFTIHNLEFGT---------------H----H--IGKAMTYADKATTVSHTYSKEVA-- 899 (1198)
Q Consensus 843 a~va~llk~~y~~~gl~~ipvV~tIHn~~~~~---------------~----l--i~~~~~~AD~VitVS~~~a~el~-- 899 (1198)
++++.+++..+ ++|.|+|.|.+.-.. + + ...++..||.|++.+..-...+.
T Consensus 420 g~vA~~La~~l------gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~ 493 (815)
T PLN00142 420 NLVASLLAHKL------GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDT 493 (815)
T ss_pred HHHHHHHHHHh------CCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccch
Confidence 99999999887 899999999775210 1 1 23467889999998866553221
Q ss_pred -----CCCC------------CCCCCCcEEEEeCCCCCCCCCCCCCC--CCCcccccchhhhchHHHHHHHHHHhCCC-C
Q 046057 900 -----GDPA------------IAPHLHKFYGILNGIDQDMWDPFNDK--FIPVSYTSENLVEGKRAAKEALQQKVGLR-K 959 (1198)
Q Consensus 900 -----~~~~------------l~~~~~K~~vI~NGID~d~~~P~~D~--~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~-~ 959 (1198)
.+.. +.....|+.+|++|+|...|.|..+. .+..-++. ++..--++...++++|+. +
T Consensus 494 i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~---I~~~l~~~~~~~e~lg~l~~ 570 (815)
T PLN00142 494 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPS---IEELLYSPEQNDEHIGYLKD 570 (815)
T ss_pred hhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhccc---chhhcCChHHHHHHhCCccC
Confidence 1111 11124589999999999999875321 00000000 011111223345678864 4
Q ss_pred CCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCCh------h---hHHHHHHHHHHhCCCCCCcEEEEc
Q 046057 960 SDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDP------R---IQNDFVNLANELHSSHADRARLCL 1028 (1198)
Q Consensus 960 ~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp------~---i~~~L~~la~eLgl~~~drV~f~g 1028 (1198)
++.++|+++||++++||++.+++|+..+.+ .+++|||+|+++++ . ....+.++++++++. ++|+|++
T Consensus 571 ~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~--~~V~flG 648 (815)
T PLN00142 571 RKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK--GQFRWIA 648 (815)
T ss_pred CCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC--CcEEEcC
Confidence 577899999999999999999999988753 46999999987321 1 124577888999984 7899987
Q ss_pred cC----ChHHHHHHHH-HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEc
Q 046057 1029 TY----DEPLSHLIYA-GADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFD 1103 (1198)
Q Consensus 1029 ~~----d~~~l~~iyA-~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~ 1103 (1198)
.. +.+.+..+++ ++|++|+||.+|+||++++|||+||+|||+|++||++|+|.++ .||++|+
T Consensus 649 ~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG-------------~tG~LV~ 715 (815)
T PLN00142 649 AQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDG-------------VSGFHID 715 (815)
T ss_pred CcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCC-------------CcEEEeC
Confidence 53 2244555555 5799999999999999999999999999999999999999998 8999999
Q ss_pred CCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHH---HhcC
Q 046057 1104 GADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVM---EQDW 1180 (1198)
Q Consensus 1104 ~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am---~qdf 1180 (1198)
+.|+++++++|. ++++.+..+++.|.+|+++++ .+.|
T Consensus 716 P~D~eaLA~aI~----------------------------------------~lLekLl~Dp~lr~~mg~~Ar~rv~e~F 755 (815)
T PLN00142 716 PYHGDEAANKIA----------------------------------------DFFEKCKEDPSYWNKISDAGLQRIYECY 755 (815)
T ss_pred CCCHHHHHHHHH----------------------------------------HHHHHhcCCHHHHHHHHHHHHHHHHHhC
Confidence 999999999998 777777889999999999984 4689
Q ss_pred ChHHHHHHHHHHH
Q 046057 1181 SWNRPALDYMELY 1193 (1198)
Q Consensus 1181 SW~~~A~~yielY 1193 (1198)
||+..+++++++-
T Consensus 756 SWe~~A~rll~L~ 768 (815)
T PLN00142 756 TWKIYAERLLTLG 768 (815)
T ss_pred CHHHHHHHHHHHH
Confidence 9999999999864
No 21
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=8.1e-35 Score=340.55 Aligned_cols=270 Identities=18% Similarity=0.203 Sum_probs=223.3
Q ss_pred CCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh--------hhHHHHHHhccCEEEEeCHHHHHHHhC
Q 046057 829 GFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG--------THHIGKAMTYADKATTVSHTYSKEVAG 900 (1198)
Q Consensus 829 ~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~--------~~li~~~~~~AD~VitVS~~~a~el~~ 900 (1198)
..+||+||+|.+.++.++..++.. +..+.|+++|+|+.... ...++..+..+|.++++|+...+.+..
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~----~~~~~~~~~t~Hg~d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~ 191 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLREL----GVLRGKIATIFHGIDISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQK 191 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHh----CCCCCCeEEEEcccccccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHHHH
Confidence 358999999998877666665542 11245678899986533 124566778999999999999998864
Q ss_pred CCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHH
Q 046057 901 DPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLI 980 (1198)
Q Consensus 901 ~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlI 980 (1198)
. +.+..|+.+|+||||.+.|.|.... ...+...|+++||+.++||++.+
T Consensus 192 ~---g~~~~ki~vi~nGvd~~~f~~~~~~----------------------------~~~~~~~il~vGrl~~~Kg~~~l 240 (406)
T PRK15427 192 M---GCPPEKIAVSRMGVDMTRFSPRPVK----------------------------APATPLEIISVARLTEKKGLHVA 240 (406)
T ss_pred c---CCCHHHEEEcCCCCCHHHcCCCccc----------------------------cCCCCeEEEEEeCcchhcCHHHH
Confidence 3 3456789999999999887652110 00234579999999999999999
Q ss_pred HHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCC------C
Q 046057 981 KHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIF------E 1052 (1198)
Q Consensus 981 leAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~------E 1052 (1198)
++|+..+.+ .+++|+|+|+|+ ..+.++++++++++. ++|.|+|..+.+++..+|+.||++|+||.. |
T Consensus 241 l~a~~~l~~~~~~~~l~ivG~G~---~~~~l~~~~~~~~l~--~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~E 315 (406)
T PRK15427 241 IEACRQLKEQGVAFRYRILGIGP---WERRLRTLIEQYQLE--DVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDME 315 (406)
T ss_pred HHHHHHHHhhCCCEEEEEEECch---hHHHHHHHHHHcCCC--CeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCcc
Confidence 999999875 368999999985 467899999999984 789999999999999999999999999984 9
Q ss_pred CCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccc
Q 046057 1053 PCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYE 1132 (1198)
Q Consensus 1053 pfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~ 1132 (1198)
++|++++|||+||+|||+|++||++|+|.++ .+|++++++|+++|+++|.
T Consensus 316 g~p~~llEAma~G~PVI~t~~~g~~E~v~~~-------------~~G~lv~~~d~~~la~ai~----------------- 365 (406)
T PRK15427 316 GIPVALMEAMAVGIPVVSTLHSGIPELVEAD-------------KSGWLVPENDAQALAQRLA----------------- 365 (406)
T ss_pred CccHHHHHHHhCCCCEEEeCCCCchhhhcCC-------------CceEEeCCCCHHHHHHHHH-----------------
Confidence 9999999999999999999999999999987 8999999999999996655
Q ss_pred cccCCCCcccccccccccchhHHHHHHHHhc-CHHHHHHHHHHH---HHhcCChHHHHHHHHHHHHH
Q 046057 1133 DLEGQPLMIPFKQKQSSMTYDSFRAISAYYD-GREWLNSLCKTV---MEQDWSWNRPALDYMELYRA 1195 (1198)
Q Consensus 1133 ~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~-~~e~~~~L~~~a---m~qdfSW~~~A~~yielY~~ 1195 (1198)
.+.+ +++.+.+|+.++ ..++|+|+.++.++.++|+.
T Consensus 366 ---------------------------~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 366 ---------------------------AFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred ---------------------------HHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 4445 888888888887 56789999999999999986
No 22
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=3.3e-34 Score=353.84 Aligned_cols=424 Identities=20% Similarity=0.255 Sum_probs=319.9
Q ss_pred EEEEEccccC-----CCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccc----------------cccc-----
Q 046057 711 HIVHIAVEMA-----PIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSD----------------VKDL----- 764 (1198)
Q Consensus 711 KIL~Vs~e~~-----P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~----------------~~~l----- 764 (1198)
-|+++|.||. |+ ..||||....+-.++.++.|..+.-|...|..--..+ ..++
T Consensus 87 ~~aYFs~E~gl~~~lpi-YsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~ 165 (778)
T cd04299 87 VAAYFSMEFGLHESLPI-YSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV 165 (778)
T ss_pred eeEEeccccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE
Confidence 4458888765 54 5899999999999999999999988876543211000 0000
Q ss_pred --------cccccccCCCceeEEeeceecCeEEEEeCCCC---Cccccc---cccCCCCchhh---HHHHHHHHHHHHHh
Q 046057 765 --------GYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQN---GFFSKG---CVYGCNNDKER---FAFFCHAALEFLLQ 827 (1198)
Q Consensus 765 --------~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~---~~f~rg---~iYg~~dd~~R---f~~F~~aale~L~~ 827 (1198)
.....+......+++|...+.++++|+++... ..|.+. .+||. |+..| +.+|+.+.+++|+.
T Consensus 166 ~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~-D~~~Rl~Qe~~Lg~agl~~Lr~ 244 (778)
T cd04299 166 RDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGG-DQETRIQQEILLGIGGVRALRA 244 (778)
T ss_pred ecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCCC-cHHHHHHHHHHHHHHHHHHHHH
Confidence 00011111234567888888899999998753 256665 47874 57889 59999999999998
Q ss_pred cCCCceEEEECCCChhHHHH-----HHHHh-hhh---cCCCCCeEEEEecCCchh-------------------------
Q 046057 828 GGFHPDIIHCHDWSSAPVAW-----LFKDH-YVH---YGLSKARIVFTIHNLEFG------------------------- 873 (1198)
Q Consensus 828 ~~~~PDVIH~Hdw~ta~va~-----llk~~-y~~---~gl~~ipvV~tIHn~~~~------------------------- 873 (1198)
.+.+|||||||||++++++. ++... +.. ....+..+|||+|++.+.
T Consensus 245 lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~ 324 (778)
T cd04299 245 LGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSR 324 (778)
T ss_pred hCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCH
Confidence 88899999999999999998 44321 100 011257899999999542
Q ss_pred -----------------hhHHHHHHhccCEEEEeCHHH---HHHHhCC--CCCCCCCCcEEEEeCCCCCCCCC-CCCCCC
Q 046057 874 -----------------THHIGKAMTYADKATTVSHTY---SKEVAGD--PAIAPHLHKFYGILNGIDQDMWD-PFNDKF 930 (1198)
Q Consensus 874 -----------------~~li~~~~~~AD~VitVS~~~---a~el~~~--~~l~~~~~K~~vI~NGID~d~~~-P~~D~~ 930 (1198)
.++.+.++.+|+.+.+||+.+ ++++... +-++....++..|.||||...|. |..+..
T Consensus 325 ~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~~l 404 (778)
T cd04299 325 DRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVEEVPIGHVTNGVHVPTWVAPEMREL 404 (778)
T ss_pred HHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcccCceeceeCCcchhhhcCHHHHHH
Confidence 134556788999999999998 5555431 22223355799999999999998 876655
Q ss_pred CCcc--------------------cccchhhhchHHHHHHHHHHh---------------------CCC-CCCCcEEEEE
Q 046057 931 IPVS--------------------YTSENLVEGKRAAKEALQQKV---------------------GLR-KSDLPLVGII 968 (1198)
Q Consensus 931 Lp~~--------------------ys~~~~~~gk~~~k~aLrq~l---------------------GL~-~~d~plIg~V 968 (1198)
+... ...+.++++|..+|.+|.+.+ +.+ +++.++|+++
T Consensus 405 ~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfa 484 (778)
T cd04299 405 YDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFA 484 (778)
T ss_pred HHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeee
Confidence 5222 123455789999999887664 322 3577899999
Q ss_pred ecCCCccCHHHHHHHHHHhhc------CCcEEEEEecCCChh------hHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 969 TRLTHQKGIHLIKHAIWRTLD------RGGQVVLLGSAPDPR------IQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 969 GRL~~qKGidlIleAl~~ll~------~~~qLVIvGsgpdp~------i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
.|+..+||.++|++.+.++.+ .++|||++|++ .|. +.+.+.+++++. .++++|.|+..|+..+.+
T Consensus 485 rRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKA-hP~d~~gK~iIk~i~~~a~~p--~~~~kVvfle~Yd~~lA~ 561 (778)
T cd04299 485 RRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKA-HPADEPGKELIQEIVEFSRRP--EFRGRIVFLEDYDMALAR 561 (778)
T ss_pred ecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEec-CccchHHHHHHHHHHHHHhCc--CCCCcEEEEcCCCHHHHH
Confidence 999999999999999888743 57999999998 543 333555555532 456899999999999999
Q ss_pred HHHHHccEEEEcCC--CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcC----------
Q 046057 1037 LIYAGADFILVPSI--FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDG---------- 1104 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~--~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~---------- 1104 (1198)
.++++|||+++||+ +|+||+++|.||..|.+-+++--|...|.. ++ .|||.|..
T Consensus 562 ~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g-------------~nGwaig~~~~~~~~~~~ 627 (778)
T cd04299 562 HLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DG-------------ENGWAIGDGDEYEDDEYQ 627 (778)
T ss_pred HHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CC-------------CCceEeCCCccccChhhc
Confidence 99999999999999 999999999999999999999999888886 55 89999988
Q ss_pred --CCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHH-HHhcC-----HHHHHHHHHHHH
Q 046057 1105 --ADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAIS-AYYDG-----REWLNSLCKTVM 1176 (1198)
Q Consensus 1105 --~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~-~l~~~-----~e~~~~L~~~am 1176 (1198)
.|+++|.+.|+ ++|- .||+. |..|.++.+++|
T Consensus 628 d~~da~~Ly~~Le----------------------------------------~~i~p~yy~r~~~g~p~~W~~~~k~sm 667 (778)
T cd04299 628 DAEEAEALYDLLE----------------------------------------NEVIPLFYDRDEGGYPPGWVAMMKHSM 667 (778)
T ss_pred chhhHHHHHHHHH----------------------------------------HHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 56667776666 5565 77774 778899999999
Q ss_pred Hh---cCChHHHHHHHHHHH
Q 046057 1177 EQ---DWSWNRPALDYMELY 1193 (1198)
Q Consensus 1177 ~q---dfSW~~~A~~yielY 1193 (1198)
.+ +|||++++++|.+-|
T Consensus 668 ~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 668 ATLGPRFSAERMVREYVERF 687 (778)
T ss_pred HhcccCCCHHHHHHHHHHHh
Confidence 98 999999999999844
No 23
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=7.5e-34 Score=324.52 Aligned_cols=355 Identities=19% Similarity=0.188 Sum_probs=253.6
Q ss_pred CcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeE
Q 046057 709 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLS 788 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~ 788 (1198)
|.||+||...+ ..||+++++..|+++|.+.||++.|++..... ... . .....|+.
T Consensus 1 ~~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~-~~~--~------------------~~~~~~i~ 55 (374)
T TIGR03088 1 RPLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVS-AFR--K------------------RIQRPDVA 55 (374)
T ss_pred CceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCC-hhH--H------------------HHHhcCce
Confidence 35899998766 46999999999999999999999888732111 000 0 01123444
Q ss_pred EEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeE-EEEe
Q 046057 789 VYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARI-VFTI 867 (1198)
Q Consensus 789 v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipv-V~tI 867 (1198)
++.+..... ..+ .+...+..++++ .+|||||+|+..+.. +.++.... ++|. +++.
T Consensus 56 ~~~~~~~~~--------------~~~-~~~~~l~~~l~~--~~~Divh~~~~~~~~-~~~~~~~~------~~~~~i~~~ 111 (374)
T TIGR03088 56 FYALHKQPG--------------KDV-AVYPQLYRLLRQ--LRPDIVHTRNLAALE-AQLPAALA------GVPARIHGE 111 (374)
T ss_pred EEEeCCCCC--------------CCh-HHHHHHHHHHHH--hCCCEEEEcchhHHH-HHHHHHhc------CCCeEEEee
Confidence 544432110 011 122345556655 489999999754322 22222221 4443 5556
Q ss_pred cCCchh--------hhHHHH-HHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccc
Q 046057 868 HNLEFG--------THHIGK-AMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSE 938 (1198)
Q Consensus 868 Hn~~~~--------~~li~~-~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~ 938 (1198)
|..... ..+++. ....+|.++++|+...+.+... ++....++.+|+||||.+.|.|...
T Consensus 112 h~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vs~~~~~~~~~~--~~~~~~~~~vi~ngvd~~~~~~~~~---------- 179 (374)
T TIGR03088 112 HGRDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSRDLEDWLRGP--VKVPPAKIHQIYNGVDTERFHPSRG---------- 179 (374)
T ss_pred cCcccccchhhHHHHHHHHHHHHhcCCeEEEeCHHHHHHHHHh--cCCChhhEEEeccCccccccCCCcc----------
Confidence 653211 122333 2346899999999998887632 2334578999999999988776321
Q ss_pred hhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC------CcEEEEEecCCChhhHHHHHHH
Q 046057 939 NLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR------GGQVVLLGSAPDPRIQNDFVNL 1012 (1198)
Q Consensus 939 ~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~------~~qLVIvGsgpdp~i~~~L~~l 1012 (1198)
.+...++....+ .+.++|+++||+.++||++.+++|+..+.+. +++|+++|.|+. .+.++++
T Consensus 180 --------~~~~~~~~~~~~-~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~---~~~~~~~ 247 (374)
T TIGR03088 180 --------DRSPILPPDFFA-DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA---RGACEQM 247 (374)
T ss_pred --------chhhhhHhhcCC-CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCch---HHHHHHH
Confidence 011122222222 4678999999999999999999999888642 689999999853 5778899
Q ss_pred HHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhc
Q 046057 1013 ANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQA 1092 (1198)
Q Consensus 1013 a~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~ 1092 (1198)
++++++. +++.|.|.. +.+..+|+.||++|+||.+|+||++++|||+||+|+|++++||..|++.++
T Consensus 248 ~~~~~~~--~~v~~~g~~--~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~--------- 314 (374)
T TIGR03088 248 VRAAGLA--HLVWLPGER--DDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHG--------- 314 (374)
T ss_pred HHHcCCc--ceEEEcCCc--CCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCC---------
Confidence 9988874 678887754 347899999999999999999999999999999999999999999999987
Q ss_pred cCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHH
Q 046057 1093 LDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLC 1172 (1198)
Q Consensus 1093 ~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~ 1172 (1198)
.+|+++++.|+++++++|. .+.++++.+..++
T Consensus 315 ----~~g~~~~~~d~~~la~~i~--------------------------------------------~l~~~~~~~~~~~ 346 (374)
T TIGR03088 315 ----VTGALVPPGDAVALARALQ--------------------------------------------PYVSDPAARRAHG 346 (374)
T ss_pred ----CceEEeCCCCHHHHHHHHH--------------------------------------------HHHhCHHHHHHHH
Confidence 7899999999999996665 3345677767776
Q ss_pred HHH---HHhcCChHHHHHHHHHHHHHHh
Q 046057 1173 KTV---MEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1173 ~~a---m~qdfSW~~~A~~yielY~~a~ 1197 (1198)
+++ +.+.|||+.++++|+++|++++
T Consensus 347 ~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 347 AAGRARAEQQFSINAMVAAYAGLYDQLL 374 (374)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhC
Confidence 666 4578999999999999999863
No 24
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=9.6e-34 Score=322.48 Aligned_cols=355 Identities=25% Similarity=0.330 Sum_probs=262.9
Q ss_pred CCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCCCC-ccccc
Q 046057 724 KVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNG-FFSKG 802 (1198)
Q Consensus 724 kvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~~-~f~rg 802 (1198)
..||++.++..|+++|+++||+|+|+++......... .....++.++.+..... .....
T Consensus 19 ~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~ 78 (398)
T cd03800 19 DTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI--------------------VELAPGVRVVRVPAGPAEYLPKE 78 (398)
T ss_pred CCCceeehHHHHHHHHhccCceEEEEEecCCcccCCc--------------------cccccceEEEecccccccCCChh
Confidence 3689999999999999999999999986532111000 01123444544432111 11000
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---------
Q 046057 803 CVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG--------- 873 (1198)
Q Consensus 803 ~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~--------- 873 (1198)
.-...+..|...+..++.....+|||||+|.+..+.++..++..+ ++|+|+++|+....
T Consensus 79 ------~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~------~~~~i~~~h~~~~~~~~~~~~~~ 146 (398)
T cd03800 79 ------ELWPYLDEFADDLLRFLRREGGRPDLIHAHYWDSGLVALLLARRL------GIPLVHTFHSLGAVKRRHLGAAD 146 (398)
T ss_pred ------hcchhHHHHHHHHHHHHHhcCCCccEEEEecCccchHHHHHHhhc------CCceEEEeecccccCCccccccc
Confidence 001112234555666666544489999999988887777666554 89999999986421
Q ss_pred -------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHH
Q 046057 874 -------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRA 946 (1198)
Q Consensus 874 -------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~ 946 (1198)
....+..+..+|.++++|+.....+... +.....++.+|+||+|.+.|.|..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~--~~~~~~~~~vi~ng~~~~~~~~~~~~----------------- 207 (398)
T cd03800 147 TYEPARRIEAEERLLRAADRVIASTPQEAEELYSL--YGAYPRRIRVVPPGVDLERFTPYGRA----------------- 207 (398)
T ss_pred ccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH--ccccccccEEECCCCCccceecccch-----------------
Confidence 0122346778999999999988877632 22344569999999999887663211
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChh---hHHHHHHHHHHhCCCCC
Q 046057 947 AKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPR---IQNDFVNLANELHSSHA 1021 (1198)
Q Consensus 947 ~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~---i~~~L~~la~eLgl~~~ 1021 (1198)
...++.++.+ .+.++|+++||+.+.||++.+++|+..+.+ .+++|+++|+++... ....++.+++++++.
T Consensus 208 --~~~~~~~~~~-~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~-- 282 (398)
T cd03800 208 --EARRARLLRD-PDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVI-- 282 (398)
T ss_pred --hhHHHhhccC-CCCcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCC--
Confidence 0113444444 467899999999999999999999999874 479999999875432 223467788888874
Q ss_pred CcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEE
Q 046057 1022 DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFS 1101 (1198)
Q Consensus 1022 drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~l 1101 (1198)
+++.|+|..+..++..+|+.||++|+||.+|+||++++|||++|+|+|+++.||..+++.++ .+|++
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~-------------~~g~~ 349 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDG-------------VTGLL 349 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCC-------------CCeEE
Confidence 78999999999999999999999999999999999999999999999999999999999886 78999
Q ss_pred EcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH---HHh
Q 046057 1102 FDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV---MEQ 1178 (1198)
Q Consensus 1102 f~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a---m~q 1178 (1198)
+++.|+++++++|. .+.++++.+.++++++ ..+
T Consensus 350 ~~~~~~~~l~~~i~--------------------------------------------~l~~~~~~~~~~~~~a~~~~~~ 385 (398)
T cd03800 350 VDPRDPEALAAALR--------------------------------------------RLLTDPALRRRLSRAGLRRARA 385 (398)
T ss_pred eCCCCHHHHHHHHH--------------------------------------------HHHhCHHHHHHHHHHHHHHHHH
Confidence 99999999996655 3446778878888877 347
Q ss_pred cCChHHHHHHHHH
Q 046057 1179 DWSWNRPALDYME 1191 (1198)
Q Consensus 1179 dfSW~~~A~~yie 1191 (1198)
.|||+.++++|++
T Consensus 386 ~~s~~~~~~~~~~ 398 (398)
T cd03800 386 RYTWERVAARLLE 398 (398)
T ss_pred hCCHHHHHHHHhC
Confidence 8999999999863
No 25
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.8e-33 Score=326.02 Aligned_cols=360 Identities=14% Similarity=0.153 Sum_probs=259.8
Q ss_pred cEEEEEccccCCCCC--CCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCe
Q 046057 710 MHIVHIAVEMAPIAK--VGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGL 787 (1198)
Q Consensus 710 MKIL~Vs~e~~P~ak--vGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv 787 (1198)
-||+|+|++-.|+.. .||+++++..+++.|. ++|++++.+...++... ...+|+
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~---~~~~~~~~~~~~~~~~~---------------------~~~~~~ 58 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTS---IPNRIACIKNPGYPEYT---------------------KVNDNC 58 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhcc---CCeeEEEecCCCCCchh---------------------hccCCC
Confidence 389999999776644 7999999999999994 39999997643322110 112344
Q ss_pred EEEEeCCCCCcccc-ccccCCCCchhhHHHHHHHHHHHHHhc-CCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEE
Q 046057 788 SVYFLEPQNGFFSK-GCVYGCNNDKERFAFFCHAALEFLLQG-GFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVF 865 (1198)
Q Consensus 788 ~v~~l~~~~~~f~r-g~iYg~~dd~~Rf~~F~~aale~L~~~-~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~ 865 (1198)
.++.+.... .+.+ ...|. . .+...+...++.++... ...+||||+|+.. .++.. ++.. +.++|+|+
T Consensus 59 ~~~~~~~~~-~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~-~~~~-----~~~~~~v~ 126 (380)
T PRK15484 59 DIHYIGFSR-IYKRLFQKWT---R-LDPLPYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQ-IRER-----APQAKLVM 126 (380)
T ss_pred ceEEEEecc-ccchhhhhhh---c-cCchhHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHH-HHhh-----CCCCCEEE
Confidence 444443221 0000 00000 0 02233444455555442 3569999999843 22222 2222 24789999
Q ss_pred EecCCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchH
Q 046057 866 TIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKR 945 (1198)
Q Consensus 866 tIHn~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~ 945 (1198)
++|+.. . ...+..++.++++|+...+.+... ....++.+||||+|.+.|.|.
T Consensus 127 ~~h~~~-~----~~~~~~~~~ii~~S~~~~~~~~~~----~~~~~i~vIpngvd~~~~~~~------------------- 178 (380)
T PRK15484 127 HMHNAF-E----PELLDKNAKIIVPSQFLKKFYEER----LPNADISIVPNGFCLETYQSN------------------- 178 (380)
T ss_pred EEeccc-C----hhHhccCCEEEEcCHHHHHHHHhh----CCCCCEEEecCCCCHHHcCCc-------------------
Confidence 999863 2 223456899999999999887632 234579999999998777652
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCCh------hhHHHHHHHHHHhC
Q 046057 946 AAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDP------RIQNDFVNLANELH 1017 (1198)
Q Consensus 946 ~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp------~i~~~L~~la~eLg 1017 (1198)
.+..++++++++ .+.++|+++||+.+.||++.+++|+..+.+ ++++|+|+|+++.. .+.+.+++++.+++
T Consensus 179 -~~~~~~~~~~~~-~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~ 256 (380)
T PRK15484 179 -PQPNLRQQLNIS-PDETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG 256 (380)
T ss_pred -chHHHHHHhCCC-CCCeEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcC
Confidence 123456778886 356889999999999999999999999864 47999999987532 23445666666554
Q ss_pred CCCCCcEEEEccCChHHHHHHHHHccEEEEcCCC-CCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCC
Q 046057 1018 SSHADRARLCLTYDEPLSHLIYAGADFILVPSIF-EPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLE 1096 (1198)
Q Consensus 1018 l~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~-EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~ 1096 (1198)
+++.|+|..+.+.+..+|+.||++|+||.+ |+||++++|||+||+|+|+++.||++|+|.++
T Consensus 257 ----~~v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~------------- 319 (380)
T PRK15484 257 ----DRCIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEG------------- 319 (380)
T ss_pred ----CcEEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccC-------------
Confidence 579999999988999999999999999986 99999999999999999999999999999987
Q ss_pred CcEE-EEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH
Q 046057 1097 PNGF-SFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV 1175 (1198)
Q Consensus 1097 ~nG~-lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a 1175 (1198)
.+|+ ++++.|+++|+++|. .+.++++. .++++++
T Consensus 320 ~~G~~l~~~~d~~~la~~I~--------------------------------------------~ll~d~~~-~~~~~~a 354 (380)
T PRK15484 320 ITGYHLAEPMTSDSIISDIN--------------------------------------------RTLADPEL-TQIAEQA 354 (380)
T ss_pred CceEEEeCCCCHHHHHHHHH--------------------------------------------HHHcCHHH-HHHHHHH
Confidence 8999 568899999996665 34466665 5677666
Q ss_pred ---HHhcCChHHHHHHHHHHHHHHh
Q 046057 1176 ---MEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1176 ---m~qdfSW~~~A~~yielY~~a~ 1197 (1198)
..+.|||+.++++|+++|+...
T Consensus 355 r~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 355 KDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 4578999999999999998753
No 26
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=7.9e-34 Score=325.63 Aligned_cols=356 Identities=17% Similarity=0.161 Sum_probs=246.6
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||+||+..+ ..||+++++.+|+++|.+.||+|+++++.... ..... . ..+. ....|..+
T Consensus 1 ki~~~~~~~----~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~----~~~~~--------~-~~~~---~~~~g~~~- 59 (372)
T cd03792 1 KVLHVNSTP----YGGGVAEILHSLVPLMRDLGVDTRWEVIKGDP----EFFNV--------T-KKFH---NALQGADI- 59 (372)
T ss_pred CeEEEeCCC----CCCcHHHHHHHHHHHHHHcCCCceEEecCCCh----hHHHH--------H-HHhh---HhhcCCCC-
Confidence 689998765 37999999999999999999999999875221 00000 0 0000 00011111
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHH--hcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEec
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLL--QGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIH 868 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~--~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIH 868 (1198)
.+. ...+. .+.......+. ....+|||||+|++....++.. +. ..++|+|+++|
T Consensus 60 ~~~----------------~~~~~-~~~~~~~~~~~~~~~~~~~Dvv~~h~~~~~~~~~~-~~------~~~~~~i~~~H 115 (372)
T cd03792 60 ELS----------------EEEKE-IYLEWNEENAERPLLDLDADVVVIHDPQPLALPLF-KK------KRGRPWIWRCH 115 (372)
T ss_pred CCC----------------HHHHH-HHHHHHHHHhccccccCCCCEEEECCCCchhHHHh-hh------cCCCeEEEEee
Confidence 000 00111 11111111111 1234899999999875333222 11 12789999999
Q ss_pred CCch-----hhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhc
Q 046057 869 NLEF-----GTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEG 943 (1198)
Q Consensus 869 n~~~-----~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~g 943 (1198)
+... ...+++..+..+|.+++.|+.+.. .. + ...++ +||||||+..... ..++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~----~~-~--~~~~~-vipngvd~~~~~~-------~~~~------- 173 (372)
T cd03792 116 IDLSSPNRRVWDFLQPYIEDYDAAVFHLPEYVP----PQ-V--PPRKV-IIPPSIDPLSGKN-------RELS------- 173 (372)
T ss_pred eecCCCcHHHHHHHHHHHHhCCEEeecHHHhcC----CC-C--CCceE-EeCCCCCCCcccc-------CCCC-------
Confidence 7542 123556677889998888843322 11 1 22344 9999999642110 0111
Q ss_pred hHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCC--hhhHHHHHHHHHHhCCC
Q 046057 944 KRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPD--PRIQNDFVNLANELHSS 1019 (1198)
Q Consensus 944 k~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpd--p~i~~~L~~la~eLgl~ 1019 (1198)
+..+..+++++|++ ++.++|+++||+.++||++.+++|+..+.+ ++++|+|+|+|+. +.....++++.+++++
T Consensus 174 -~~~~~~~~~~~~~~-~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~- 250 (372)
T cd03792 174 -PADIEYILEKYGID-PERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEG- 250 (372)
T ss_pred -HHHHHHHHHHhCCC-CCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCC-
Confidence 12345677888887 478899999999999999999999998875 4799999999854 2234445666666665
Q ss_pred CCCcEEEEccC--ChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCC
Q 046057 1020 HADRARLCLTY--DEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEP 1097 (1198)
Q Consensus 1020 ~~drV~f~g~~--d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~ 1097 (1198)
.+++.|++.. +.+++..+|++||++++||.+|+||++++|||+||+|+|+++.||++++|.++ .
T Consensus 251 -~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~-------------~ 316 (372)
T cd03792 251 -DPDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDG-------------E 316 (372)
T ss_pred -CCCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccC-------------C
Confidence 3679998876 78889999999999999999999999999999999999999999999999887 8
Q ss_pred cEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--
Q 046057 1098 NGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV-- 1175 (1198)
Q Consensus 1098 nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a-- 1175 (1198)
+|+++++ +++++.+|. .+.++++.+.+|++++
T Consensus 317 ~g~~~~~--~~~~a~~i~--------------------------------------------~ll~~~~~~~~~~~~a~~ 350 (372)
T cd03792 317 TGFLVDT--VEEAAVRIL--------------------------------------------YLLRDPELRRKMGANARE 350 (372)
T ss_pred ceEEeCC--cHHHHHHHH--------------------------------------------HHHcCHHHHHHHHHHHHH
Confidence 8999874 556664443 4446788888888877
Q ss_pred -HHhcCChHHHHHHHHHHHHHH
Q 046057 1176 -MEQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1176 -m~qdfSW~~~A~~yielY~~a 1196 (1198)
..+.|+|+.++.+|+++|+++
T Consensus 351 ~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 351 HVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHcCHHHHHHHHHHHHHhC
Confidence 346899999999999999864
No 27
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=3.2e-33 Score=310.91 Aligned_cols=331 Identities=21% Similarity=0.206 Sum_probs=239.8
Q ss_pred cEEEEEccccCC--CCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCe
Q 046057 710 MHIVHIAVEMAP--IAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGL 787 (1198)
Q Consensus 710 MKIL~Vs~e~~P--~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv 787 (1198)
|||++|+..+.| -...||.++++..|+++|.++||+|.++++......... ..
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~----------------~~--------- 55 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPL----------------VP--------- 55 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccce----------------ee---------
Confidence 899999998854 235899999999999999999999999997633211000 00
Q ss_pred EEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEe
Q 046057 788 SVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTI 867 (1198)
Q Consensus 788 ~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tI 867 (1198)
..+....... .........+...+.+++++ .+|||||+|.+..... +.. ..++|+|+++
T Consensus 56 ----~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~Divh~~~~~~~~~---~~~------~~~~~~v~~~ 114 (335)
T cd03802 56 ----VVPEPLRLDA------PGRDRAEAEALALAERALAA--GDFDIVHNHSLHLPLP---FAR------PLPVPVVTTL 114 (335)
T ss_pred ----ccCCCccccc------chhhHhhHHHHHHHHHHHhc--CCCCEEEecCcccchh---hhc------ccCCCEEEEe
Confidence 0000000000 00000111222334455544 4799999999876654 111 2378999999
Q ss_pred cCCchhh-hHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHH
Q 046057 868 HNLEFGT-HHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRA 946 (1198)
Q Consensus 868 Hn~~~~~-~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~ 946 (1198)
|+..... ..........+.++++|+.....+... .++.+|+||+|.+.|.+..
T Consensus 115 h~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-------~~~~vi~ngvd~~~~~~~~------------------- 168 (335)
T cd03802 115 HGPPDPELLKLYYAARPDVPFVSISDAQRRPWPPL-------PWVATVHNGIDLDDYPFRG------------------- 168 (335)
T ss_pred cCCCCcccchHHHhhCcCCeEEEecHHHHhhcccc-------cccEEecCCcChhhCCCCC-------------------
Confidence 9986542 123445567889999999998877421 6899999999998876510
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEE
Q 046057 947 AKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARL 1026 (1198)
Q Consensus 947 ~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f 1026 (1198)
.+..+|+++||+.+.||++.+++|+.+. +++|+|+|.+++. ..+.....+... ..++|.|
T Consensus 169 -------------~~~~~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~~---~~~~~~~~~~~~-~~~~v~~ 228 (335)
T cd03802 169 -------------PKGDYLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSDP---DYFYREIAPELL-DGPDIEY 228 (335)
T ss_pred -------------CCCCEEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCCH---HHHHHHHHHhcc-cCCcEEE
Confidence 2456899999999999999999998654 7999999998542 334444443321 1378999
Q ss_pred EccCChHHHHHHHHHccEEEEcCCC-CCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCC
Q 046057 1027 CLTYDEPLSHLIYAGADFILVPSIF-EPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGA 1105 (1198)
Q Consensus 1027 ~g~~d~~~l~~iyA~ADi~LvPS~~-EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~ 1105 (1198)
+|.++...+..+|+.+|++|+||.+ |+||++++|||+||+|||+++.||+.|++.++ .+|+++++
T Consensus 229 ~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~-------------~~g~l~~~- 294 (335)
T cd03802 229 LGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDG-------------VTGFLVDS- 294 (335)
T ss_pred eCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCC-------------CcEEEeCC-
Confidence 9999988889999999999999985 99999999999999999999999999999986 79999986
Q ss_pred CHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHH
Q 046057 1106 DIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRP 1185 (1198)
Q Consensus 1106 D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~ 1185 (1198)
+++++++|. .++ +.. .+.+++...+.|||+.+
T Consensus 295 -~~~l~~~l~----------------------------------------~l~----~~~---~~~~~~~~~~~~s~~~~ 326 (335)
T cd03802 295 -VEELAAAVA----------------------------------------RAD----RLD---RAACRRRAERRFSAARM 326 (335)
T ss_pred -HHHHHHHHH----------------------------------------HHh----ccH---HHHHHHHHHHhCCHHHH
Confidence 889997777 222 111 11223334578999999
Q ss_pred HHHHHHHHH
Q 046057 1186 ALDYMELYR 1194 (1198)
Q Consensus 1186 A~~yielY~ 1194 (1198)
+++|+++|+
T Consensus 327 ~~~~~~~y~ 335 (335)
T cd03802 327 VDDYLALYR 335 (335)
T ss_pred HHHHHHHhC
Confidence 999999995
No 28
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=4.5e-33 Score=318.79 Aligned_cols=356 Identities=18% Similarity=0.167 Sum_probs=247.4
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
|||++++..+ ..||.++++..|+++|+++||+|+|+++..+.... .. ....+ ++.+
T Consensus 1 mkIl~~~~~~----~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~--~~------~~~~~------------~~~i 56 (392)
T cd03805 1 LRVAFIHPDL----GIGGAERLVVDAALALQSRGHEVTIYTSHHDPSHC--FE------ETKDG------------TLPV 56 (392)
T ss_pred CeEEEECCCC----CCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchhc--ch------hccCC------------eeEE
Confidence 8999998655 47999999999999999999999999975321100 00 00001 1112
Q ss_pred EEeCC--CCCccccccccCCCCchhhHH-HHHHHHHHHH--HhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEE
Q 046057 790 YFLEP--QNGFFSKGCVYGCNNDKERFA-FFCHAALEFL--LQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIV 864 (1198)
Q Consensus 790 ~~l~~--~~~~f~rg~iYg~~dd~~Rf~-~F~~aale~L--~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV 864 (1198)
..+.. +..++.+ ...+. ++......+. .....++||||+|++..+. + +++.. .+.|+|
T Consensus 57 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~-~-~~~~~------~~~~~i 119 (392)
T cd03805 57 RVRGDWLPRSIFGR---------FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACV-P-LLKLF------SPSKIL 119 (392)
T ss_pred EEEeEEEcchhhHh---------HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHH-H-HHHHh------cCCcEE
Confidence 21110 0011111 00010 1111111111 1223589999999866432 2 22221 137999
Q ss_pred EEecCCchh--------hh--------HHHHHHhccCEEEEeCHHHHHHHhCCCCCCC-CCCcEEEEeCCCCCCCCCCCC
Q 046057 865 FTIHNLEFG--------TH--------HIGKAMTYADKATTVSHTYSKEVAGDPAIAP-HLHKFYGILNGIDQDMWDPFN 927 (1198)
Q Consensus 865 ~tIHn~~~~--------~~--------li~~~~~~AD~VitVS~~~a~el~~~~~l~~-~~~K~~vI~NGID~d~~~P~~ 927 (1198)
+++|..... .. +.+..+..+|.++++|+...+.+... ++. ...++.+|+||+|.+.|.|..
T Consensus 120 ~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~~~~--~~~~~~~~~~vi~n~vd~~~~~~~~ 197 (392)
T cd03805 120 FYCHFPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVFKKT--FPSLAKNPREVVYPCVDTDSFESTS 197 (392)
T ss_pred EEEecChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHHHHH--hcccccCCcceeCCCcCHHHcCccc
Confidence 999964321 11 12235678999999999998877631 221 222346999999998876632
Q ss_pred CCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc-----CCcEEEEEecCCC
Q 046057 928 DKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD-----RGGQVVLLGSAPD 1002 (1198)
Q Consensus 928 D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~-----~~~qLVIvGsgpd 1002 (1198)
... .++..... ++.++|+++||+.+.||++.+++|+..+.+ ++++|+++|+++.
T Consensus 198 ~~~--------------------~~~~~~~~-~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~ 256 (392)
T cd03805 198 EDP--------------------DPGLLIPK-SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDP 256 (392)
T ss_pred ccc--------------------cccccccC-CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCC
Confidence 110 11122222 467899999999999999999999999874 3789999998743
Q ss_pred h-----hhHHHHHHHHHH-hCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccc
Q 046057 1003 P-----RIQNDFVNLANE-LHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGL 1076 (1198)
Q Consensus 1003 p-----~i~~~L~~la~e-Lgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl 1076 (1198)
. .+.+.+++++++ ++++ ++|.|+|.++.+.+..+|+.||++|+||..|+||++++|||+||+|||++++||.
T Consensus 257 ~~~~~~~~~~~l~~~~~~~~~l~--~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~ 334 (392)
T cd03805 257 RVAENVEYLEELQRLAEELLLLE--DQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGP 334 (392)
T ss_pred CCchhHHHHHHHHHHHHHhcCCC--ceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCc
Confidence 2 244678888888 8874 8999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHH
Q 046057 1077 YDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFR 1156 (1198)
Q Consensus 1077 ~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 1156 (1198)
.|++.++ .+|+++++ |+++++++|.
T Consensus 335 ~e~i~~~-------------~~g~~~~~-~~~~~a~~i~----------------------------------------- 359 (392)
T cd03805 335 LETVVDG-------------ETGFLCEP-TPEEFAEAML----------------------------------------- 359 (392)
T ss_pred HHHhccC-------------CceEEeCC-CHHHHHHHHH-----------------------------------------
Confidence 9999987 78999976 8999985555
Q ss_pred HHHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHH
Q 046057 1157 AISAYYDGREWLNSLCKTV---MEQDWSWNRPALDY 1189 (1198)
Q Consensus 1157 AI~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~y 1189 (1198)
.+.++++.+.++++++ +++.|+|+.+++++
T Consensus 360 ---~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 360 ---KLANDPDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred ---HHHhChHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 4446777778887777 45789999998763
No 29
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=2.3e-32 Score=306.00 Aligned_cols=351 Identities=20% Similarity=0.237 Sum_probs=256.3
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++++..+ ..||.++++..|+++|.++||+|++++........ . . . .+..+.
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~-~---~--------~-----------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVK-P---P--------I-----------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCcc-c---h--------h-----------hccceE
Confidence 588887654 47999999999999999999999999864221100 0 0 0 000000
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
.+..... ...+......+.+++++ .+|||||+|.+.+..++.+++..+ .++|+|++.|+.
T Consensus 54 ~~~~~~~-------------~~~~~~~~~~~~~~~~~--~~pdiv~~~~~~~~~~~~l~~~~~-----~~~~~v~~~h~~ 113 (360)
T cd04951 54 NLNMSKN-------------PLSFLLALWKLRKILRQ--FKPDVVHAHMFHANIFARLLRLFL-----PSPPLICTAHSK 113 (360)
T ss_pred Eeccccc-------------chhhHHHHHHHHHHHHh--cCCCEEEEcccchHHHHHHHHhhC-----CCCcEEEEeecc
Confidence 0110000 00111122334445544 589999999988777776665542 378999999987
Q ss_pred chhhh---HH-HHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHH
Q 046057 871 EFGTH---HI-GKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRA 946 (1198)
Q Consensus 871 ~~~~~---li-~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~ 946 (1198)
..... ++ +.....++.++++|+...+.+..... ....++.+||||+|...|.+.. .
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~--~~~~~~~~i~ng~~~~~~~~~~------------------~ 173 (360)
T cd04951 114 NEGGRLRMLAYRLTDFLSDLTTNVSKEALDYFIASKA--FNANKSFVVYNGIDTDRFRKDP------------------A 173 (360)
T ss_pred CchhHHHHHHHHHHhhccCceEEEcHHHHHHHHhccC--CCcccEEEEccccchhhcCcch------------------H
Confidence 65422 11 22334678889999999988875332 3456899999999987765421 1
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcE
Q 046057 947 AKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRA 1024 (1198)
Q Consensus 947 ~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV 1024 (1198)
.+..+++.++++ ++.++++++||+.+.||++.+++|+..+.+ ++++|+|+|+|+. .+.++++++++++ .++|
T Consensus 174 ~~~~~~~~~~~~-~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~--~~~v 247 (360)
T cd04951 174 RRLKIRNALGVK-NDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL---RATLERLIKALGL--SNRV 247 (360)
T ss_pred HHHHHHHHcCcC-CCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc---HHHHHHHHHhcCC--CCcE
Confidence 234567788886 467899999999999999999999998875 3799999999864 4678888888876 4789
Q ss_pred EEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcC
Q 046057 1025 RLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDG 1104 (1198)
Q Consensus 1025 ~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~ 1104 (1198)
.|+|..+ .+..+|+.||++|+||.+|+||++++|||++|+|+|+++.||..|++.+ +|+.+++
T Consensus 248 ~~~g~~~--~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~---------------~g~~~~~ 310 (360)
T cd04951 248 KLLGLRD--DIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD---------------SGLIVPI 310 (360)
T ss_pred EEecccc--cHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC---------------CceEeCC
Confidence 9998764 3689999999999999999999999999999999999999999999864 5999999
Q ss_pred CCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHH--HHHHhcCCh
Q 046057 1105 ADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCK--TVMEQDWSW 1182 (1198)
Q Consensus 1105 ~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~--~am~qdfSW 1182 (1198)
.|+++++++|. ++++ .+++....+.. ..+.+.|||
T Consensus 311 ~~~~~~~~~i~----------------------------------------~ll~---~~~~~~~~~~~~~~~~~~~~s~ 347 (360)
T cd04951 311 SDPEALANKID----------------------------------------EILK---MSGEERDIIGARRERIVKKFSI 347 (360)
T ss_pred CCHHHHHHHHH----------------------------------------HHHh---CCHHHHHHHHHHHHHHHHhcCH
Confidence 99999997777 3332 23333333333 336678999
Q ss_pred HHHHHHHHHHHH
Q 046057 1183 NRPALDYMELYR 1194 (1198)
Q Consensus 1183 ~~~A~~yielY~ 1194 (1198)
+.++.+|.++|.
T Consensus 348 ~~~~~~~~~~y~ 359 (360)
T cd04951 348 NSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHHhh
Confidence 999999999996
No 30
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=1.4e-32 Score=308.23 Aligned_cols=314 Identities=20% Similarity=0.201 Sum_probs=235.2
Q ss_pred CCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCCCCcccccc
Q 046057 724 KVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGC 803 (1198)
Q Consensus 724 kvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~~~f~rg~ 803 (1198)
..||.++++..|+++|+++||+|.|+++...... . ....|+.++.+.....
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~-----~------------------~~~~~~~~~~~~~~~~------ 58 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRLVA-----E------------------LEAEGSRHIKLPFISK------ 58 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHH-----H------------------HHhcCCeEEEcccccc------
Confidence 4699999999999999999999999986421100 0 0112333332221100
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhhHHHHHHhc
Q 046057 804 VYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTY 883 (1198)
Q Consensus 804 iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~li~~~~~~ 883 (1198)
.......+...+..++.+ .+|||||+|....++.+.+..... ++|+|+++|+......+....+..
T Consensus 59 ------~~~~~~~~~~~l~~~~~~--~~~dii~~~~~~~~~~~~~~~~~~------~~~~i~~~h~~~~~~~~~~~~~~~ 124 (355)
T cd03819 59 ------NPLRILLNVARLRRLIRE--EKVDIVHARSRAPAWSAYLAARRT------RPPFVTTVHGFYSVNFRYNAIMAR 124 (355)
T ss_pred ------chhhhHHHHHHHHHHHHH--cCCCEEEECCCchhHHHHHHHHhc------CCCEEEEeCCchhhHHHHHHHHHh
Confidence 000111122334455554 489999999877766665554432 799999999987655466677789
Q ss_pred cCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCc
Q 046057 884 ADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLP 963 (1198)
Q Consensus 884 AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~p 963 (1198)
+|.++++|+...+.+.. .++.+..++.+|+||+|...|.+... .......++++++++ .+.+
T Consensus 125 ~~~vi~~s~~~~~~~~~--~~~~~~~k~~~i~ngi~~~~~~~~~~---------------~~~~~~~~~~~~~~~-~~~~ 186 (355)
T cd03819 125 GDRVIAVSNFIADHIRE--NYGVDPDRIRVIPRGVDLDRFDPGAV---------------PPERILALAREWPLP-KGKP 186 (355)
T ss_pred cCEEEEeCHHHHHHHHH--hcCCChhhEEEecCCccccccCcccc---------------chHHHHHHHHHcCCC-CCce
Confidence 99999999999998862 24445678999999999988765321 011122367777776 4678
Q ss_pred EEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCCh-hhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH
Q 046057 964 LVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDP-RIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA 1040 (1198)
Q Consensus 964 lIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp-~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA 1040 (1198)
+|+++||+.++||++.+++|+..+.+ .+++|+++|.++.. .+...+.+++.++++ .++|.|+|.. +.+..+|+
T Consensus 187 ~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~--~~~v~~~g~~--~~~~~~l~ 262 (355)
T cd03819 187 VILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGL--QDRVTFVGHC--SDMPAAYA 262 (355)
T ss_pred EEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCC--cceEEEcCCc--ccHHHHHH
Confidence 99999999999999999999999976 57999999998542 344556667777776 3789999883 34789999
Q ss_pred HccEEEEcC-CCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1041 GADFILVPS-IFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1041 ~ADi~LvPS-~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.||++++|| ..|++|++++|||++|+|+|+++.||..|++.++ .+|+++++.|+++++++|.
T Consensus 263 ~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~-------------~~g~~~~~~~~~~l~~~i~ 325 (355)
T cd03819 263 LADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPG-------------ETGLLVPPGDAEALAQALD 325 (355)
T ss_pred hCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCC-------------CceEEeCCCCHHHHHHHHH
Confidence 999999999 7999999999999999999999999999999886 6899999999999997765
No 31
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1e-31 Score=301.54 Aligned_cols=346 Identities=17% Similarity=0.178 Sum_probs=240.0
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|.....|- ..||+++++..|+++|+++||+|+|+++....... .....|+.++
T Consensus 1 ~i~~i~~~~~~~-~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~----------------------~~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIPA-KYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK----------------------ETEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCCc-ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc----------------------ccccCCceEE
Confidence 689997765553 58999999999999999999999999975322110 0122455655
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
.+...... ...++.+....++..+. ...++|+||.......++..+++. .+.|+|+++|+.
T Consensus 58 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~-------~~~~~v~~~h~~ 118 (363)
T cd04955 58 HIPAPEIG-----------GLGTIIYDILAILHALF-VKRDIDHVHALGPAIAPFLPLLRL-------KGKKVVVNMDGL 118 (363)
T ss_pred EcCCCCcc-----------chhhhHHHHHHHHHHHh-ccCCeEEEEecCccHHHHHHHHHh-------cCCCEEEEccCc
Confidence 55422100 00011111111222222 223455555444333222222221 278999999987
Q ss_pred chhh--------h----HHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccc
Q 046057 871 EFGT--------H----HIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSE 938 (1198)
Q Consensus 871 ~~~~--------~----li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~ 938 (1198)
.+.. . ..+..+..+|.++++|+...+.+.. .++.. . .+|+||+|...+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--~~~~~--~-~~i~ngv~~~~~~~------------- 180 (363)
T cd04955 119 EWKRAKWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE--KYGRD--S-TYIPYGADHVVSSE------------- 180 (363)
T ss_pred ceeecccccchhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH--hcCCC--C-eeeCCCcChhhcch-------------
Confidence 5431 1 1234567899999999999998852 12222 2 89999999865432
Q ss_pred hhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHH-HhC
Q 046057 939 NLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLAN-ELH 1017 (1198)
Q Consensus 939 ~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~-eLg 1017 (1198)
+...++.++++ +.+.++++||+.+.||++.+++|+..+.. +++|+|+|++++. ..+.+... .++
T Consensus 181 ---------~~~~~~~~~~~--~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~---~~~~~~~~~~~~ 245 (363)
T cd04955 181 ---------EDEILKKYGLE--PGRYYLLVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHN---TPYGKLLKEKAA 245 (363)
T ss_pred ---------hhhhHHhcCCC--CCcEEEEEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCc---chHHHHHHHHhC
Confidence 11233455554 34568899999999999999999988754 7999999998432 23333333 455
Q ss_pred CCCCCcEEEEccCChHHHHHHHHHccEEEEcCCC-CCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCC
Q 046057 1018 SSHADRARLCLTYDEPLSHLIYAGADFILVPSIF-EPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLE 1096 (1198)
Q Consensus 1018 l~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~-EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~ 1096 (1198)
+ .++|+|+|.++.+++..+|+.||++++||.. |+||++++|||+||+|||++++||..|++.+
T Consensus 246 ~--~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~-------------- 309 (363)
T cd04955 246 A--DPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD-------------- 309 (363)
T ss_pred C--CCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--------------
Confidence 5 4789999999888889999999999999999 9999999999999999999999999999864
Q ss_pred CcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH-
Q 046057 1097 PNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV- 1175 (1198)
Q Consensus 1097 ~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a- 1175 (1198)
+|++|++.|+ ++++|. .+.++++.+.++++++
T Consensus 310 -~g~~~~~~~~--l~~~i~--------------------------------------------~l~~~~~~~~~~~~~~~ 342 (363)
T cd04955 310 -KAIYFKVGDD--LASLLE--------------------------------------------ELEADPEEVSAMAKAAR 342 (363)
T ss_pred -CeeEecCchH--HHHHHH--------------------------------------------HHHhCHHHHHHHHHHHH
Confidence 4899988775 774444 4456777777777766
Q ss_pred --HHhcCChHHHHHHHHHHHH
Q 046057 1176 --MEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1176 --m~qdfSW~~~A~~yielY~ 1194 (1198)
..+.|||+.++++|+++|+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 343 ERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 3457999999999999984
No 32
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=3.1e-32 Score=315.65 Aligned_cols=356 Identities=17% Similarity=0.143 Sum_probs=244.9
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
|||||...|++ ....|+++|+++||+|.|+++...... . .|++++
T Consensus 1 ~il~~~~~~p~---------~~~~la~~L~~~G~~v~~~~~~~~~~~---------------~-----------~~v~~~ 45 (396)
T cd03818 1 RILFVHQNFPG---------QFRHLAPALAAQGHEVVFLTEPNAAPP---------------P-----------GGVRVV 45 (396)
T ss_pred CEEEECCCCch---------hHHHHHHHHHHCCCEEEEEecCCCCCC---------------C-----------CCeeEE
Confidence 68999877753 246799999999999999997633100 0 044555
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHH---HHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEe
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAAL---EFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTI 867 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aal---e~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tI 867 (1198)
.+.+...- ....+.+............++. ..+...+++|||||+|.... .+.+++..+ .++|+|.++
T Consensus 46 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~--~~~~l~~~~-----~~~~~v~~~ 116 (396)
T cd03818 46 RYRPPRGP--TSGTHPYLREFEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWG--ETLFLKDVW-----PDAPLIGYF 116 (396)
T ss_pred EecCCCCC--CCCCCccchhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccc--hhhhHHHhC-----CCCCEEEEE
Confidence 44432110 1122233233322222122222 22334578999999996332 223344332 367888766
Q ss_pred c------CCch--h----h-----hH-------HHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCC
Q 046057 868 H------NLEF--G----T-----HH-------IGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMW 923 (1198)
Q Consensus 868 H------n~~~--~----~-----~l-------i~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~ 923 (1198)
| +... . . .. ....+..+|.++++|+...+.+.. .+ ..++.+|+||||.+.|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~--~~---~~ki~vI~ngvd~~~f 191 (396)
T cd03818 117 EFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPA--EL---RSRISVIHDGIDTDRL 191 (396)
T ss_pred eeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcH--hh---ccceEEeCCCcccccc
Confidence 4 3211 0 0 11 224578999999999999887742 11 2689999999999988
Q ss_pred CCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEec-CCCccCHHHHHHHHHHhhc--CCcEEEEEecC
Q 046057 924 DPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITR-LTHQKGIHLIKHAIWRTLD--RGGQVVLLGSA 1000 (1198)
Q Consensus 924 ~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGR-L~~qKGidlIleAl~~ll~--~~~qLVIvGsg 1000 (1198)
.|.... ...++...++. ++.++|+++|| +.++||++.+++|+..+.+ ++++|+|+|++
T Consensus 192 ~~~~~~------------------~~~~~~~~~~~-~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~ 252 (396)
T cd03818 192 RPDPQA------------------RLRLPNGRVLT-PGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGD 252 (396)
T ss_pred CCCchh------------------hhcccccccCC-CCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCC
Confidence 773210 11112222233 36679999998 9999999999999998874 58999999974
Q ss_pred CC-----h-hhHHHHHHHHHHhCCC-CCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC
Q 046057 1001 PD-----P-RIQNDFVNLANELHSS-HADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1001 pd-----p-~i~~~L~~la~eLgl~-~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
.. + ......+.+.++++.. ..++|.|+|.++.+.+..+|+.||++++||..|++|++++|||+||+|||+++.
T Consensus 253 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~ 332 (396)
T cd03818 253 GVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT 332 (396)
T ss_pred CcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC
Confidence 21 0 0111233344444421 136899999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchh
Q 046057 1074 GGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYD 1153 (1198)
Q Consensus 1074 GGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1153 (1198)
||++|+|.++ .+|+++++.|+++|+++|.
T Consensus 333 ~g~~e~i~~~-------------~~G~lv~~~d~~~la~~i~-------------------------------------- 361 (396)
T cd03818 333 APVREVITDG-------------ENGLLVDFFDPDALAAAVI-------------------------------------- 361 (396)
T ss_pred CCchhhcccC-------------CceEEcCCCCHHHHHHHHH--------------------------------------
Confidence 9999999987 8999999999999996665
Q ss_pred HHHHHHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHHHH
Q 046057 1154 SFRAISAYYDGREWLNSLCKTV---MEQDWSWNRPALDYME 1191 (1198)
Q Consensus 1154 ~~rAI~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~yie 1191 (1198)
.+.++++.+.+|++++ ..+.|||+.++.+|++
T Consensus 362 ------~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 362 ------ELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred ------HHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 3446788888888777 4567999999999874
No 33
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=1e-31 Score=330.84 Aligned_cols=375 Identities=13% Similarity=0.051 Sum_probs=254.1
Q ss_pred CCCc-EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCC------------eEEEEeeCCCCCcc--ccccccccccccc
Q 046057 707 EPPM-HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNH------------NVDIILPKYDCLKF--SDVKDLGYNRSYH 771 (1198)
Q Consensus 707 e~pM-KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH------------~V~VItP~y~~~~~--~~~~~l~~~~~~~ 771 (1198)
+.|. ||+||.... ..||+++++..|+.+|.+.++ .+.|++........ .....
T Consensus 278 ~~~~~rIl~vi~sl----~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~-------- 345 (694)
T PRK15179 278 ESFVGPVLMINGSL----GAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAAT-------- 345 (694)
T ss_pred CCCcceEEEEeCCC----CCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHH--------
Confidence 4566 999998766 469999999999999999854 34444421100000 00000
Q ss_pred CCCceeEEeeceecCeEEEEeCCCCCccccccccCCCC-chhh--------HHHHHHHHHHHHHhcCCCceEEEECCCCh
Q 046057 772 WGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGCVYGCNN-DKER--------FAFFCHAALEFLLQGGFHPDIIHCHDWSS 842 (1198)
Q Consensus 772 ~g~~~i~V~~~~~~Gv~v~~l~~~~~~f~rg~iYg~~d-d~~R--------f~~F~~aale~L~~~~~~PDVIH~Hdw~t 842 (1198)
..-.|++++.+......+.. ...... ...| ...+...+.+++++ .+|||||+|...+
T Consensus 346 ----------L~~~Gv~v~~l~~~~~~~~~--~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~--~kpDIVH~h~~~a 411 (694)
T PRK15179 346 ----------LADAGIPVSVYSDMQAWGGC--EFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS--SVPSVVHIWQDGS 411 (694)
T ss_pred ----------HHhCCCeEEEeccCCccCcc--cccccchhhHHHhhhcchhHHHHHHHHHHHHHH--cCCcEEEEeCCcH
Confidence 01135555555322110000 000000 0011 12233556666666 4899999999887
Q ss_pred hHHHHHHHHhhhhcCCCCCeEEE-EecCCchhh---------hHHHHHHhc--cCEEEEeCHHHHHHHhCCCCCCCCCCc
Q 046057 843 APVAWLFKDHYVHYGLSKARIVF-TIHNLEFGT---------HHIGKAMTY--ADKATTVSHTYSKEVAGDPAIAPHLHK 910 (1198)
Q Consensus 843 a~va~llk~~y~~~gl~~ipvV~-tIHn~~~~~---------~li~~~~~~--AD~VitVS~~~a~el~~~~~l~~~~~K 910 (1198)
.+++.++.... ++|+|+ ++|+..... ..+...+.. ++.++++|...++.+.. .++.+..+
T Consensus 412 ~~lg~lAa~~~------gvPvIv~t~h~~~~~~~~~~~~~~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~--~~g~~~~k 483 (694)
T PRK15179 412 IFACALAALLA------GVPRIVLSVRTMPPVDRPDRYRVEYDIIYSELLKMRGVALSSNSQFAAHRYAD--WLGVDERR 483 (694)
T ss_pred HHHHHHHHHHc------CCCEEEEEeCCCccccchhHHHHHHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--HcCCChhH
Confidence 77776665543 678766 667643210 111122333 34566667777766642 23455679
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc-
Q 046057 911 FYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD- 989 (1198)
Q Consensus 911 ~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~- 989 (1198)
+.+||||||...|.|... ....+..++ ..++ .+.++|+++||+.++||++.+++|+..+.+
T Consensus 484 I~VI~NGVd~~~f~~~~~---------------~~~~~~~~~--~~~~-~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~ 545 (694)
T PRK15179 484 IPVVYNGLAPLKSVQDDA---------------CTAMMAQFD--ARTS-DARFTVGTVMRVDDNKRPFLWVEAAQRFAAS 545 (694)
T ss_pred EEEECCCcCHHhcCCCch---------------hhHHHHhhc--cccC-CCCeEEEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 999999999877754210 000011111 1222 356799999999999999999999998864
Q ss_pred -CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcE
Q 046057 990 -RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIP 1068 (1198)
Q Consensus 990 -~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~Pv 1068 (1198)
++++|+|+|+|+ ..+.++++++++++. ++|.|+|..+ .+..+|+.+|++|+||.+|+||++++|||+||+||
T Consensus 546 ~p~~~LvIvG~G~---~~~~L~~l~~~lgL~--~~V~flG~~~--dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PV 618 (694)
T PRK15179 546 HPKVRFIMVGGGP---LLESVREFAQRLGMG--ERILFTGLSR--RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPV 618 (694)
T ss_pred CcCeEEEEEccCc---chHHHHHHHHHcCCC--CcEEEcCCcc--hHHHHHHhcCEEEeccccccchHHHHHHHHcCCeE
Confidence 479999999986 367899999999984 8899988764 47899999999999999999999999999999999
Q ss_pred EEeCCccccccccccccchhhhhccCCCCcEEEEcCCCH--HHHHHHHhhcccccccccccccccccccCCCCccccccc
Q 046057 1069 VVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADI--AGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQK 1146 (1198)
Q Consensus 1069 Ivt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~--~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1146 (1198)
|+|++||++|+|.++ .+|++|+++|+ ++++++|.
T Consensus 619 Vat~~gG~~EiV~dg-------------~~GlLv~~~d~~~~~La~aL~------------------------------- 654 (694)
T PRK15179 619 VTTLAGGAGEAVQEG-------------VTGLTLPADTVTAPDVAEALA------------------------------- 654 (694)
T ss_pred EEECCCChHHHccCC-------------CCEEEeCCCCCChHHHHHHHH-------------------------------
Confidence 999999999999987 89999997774 68888887
Q ss_pred ccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 046057 1147 QSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1147 ~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~ 1194 (1198)
+++..+..++...+...+. ..+.|||+.++++|+++|+
T Consensus 655 ---------~ll~~l~~~~~l~~~ar~~-a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 655 ---------RIHDMCAADPGIARKAADW-ASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred ---------HHHhChhccHHHHHHHHHH-HHHhCCHHHHHHHHHHHhC
Confidence 6666655666654433333 3468999999999999996
No 34
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=1.2e-31 Score=300.74 Aligned_cols=320 Identities=18% Similarity=0.204 Sum_probs=242.2
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
|||+|++.. + ..||.++++..|+++|.++||+|++++....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999753 2 3699999999999999999999999985411
Q ss_pred EEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecC
Q 046057 790 YFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHN 869 (1198)
Q Consensus 790 ~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn 869 (1198)
. +.+.+.. .+|||||+|.+..+.+.......+. .++|+|+|+|+
T Consensus 42 -------~-----------------------~~~~~~~--~~~diih~~~~~~~~~~~~~~~~~~----~~~~~v~~~hd 85 (365)
T cd03825 42 -------A-----------------------LISKIEI--INADIVHLHWIHGGFLSIEDLSKLL----DRKPVVWTLHD 85 (365)
T ss_pred -------h-----------------------hhhChhc--ccCCEEEEEccccCccCHHHHHHHH----cCCCEEEEccc
Confidence 0 0111111 4899999998666554443333321 37899999997
Q ss_pred Cchh--------------------------------hhHH---HHHH-hccCEEEEeCHHHHHHHhCCCCCCCCCCcEEE
Q 046057 870 LEFG--------------------------------THHI---GKAM-TYADKATTVSHTYSKEVAGDPAIAPHLHKFYG 913 (1198)
Q Consensus 870 ~~~~--------------------------------~~li---~~~~-~~AD~VitVS~~~a~el~~~~~l~~~~~K~~v 913 (1198)
.... .... ...+ ..++.++++|+...+.+... +.....++.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--~~~~~~~~~v 163 (365)
T cd03825 86 MWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--SLFKGIPIEV 163 (365)
T ss_pred CcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc--cccCCCceEE
Confidence 6321 0011 1111 34678899999888888643 2244578999
Q ss_pred EeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCC--ccCHHHHHHHHHHhhc--
Q 046057 914 ILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTH--QKGIHLIKHAIWRTLD-- 989 (1198)
Q Consensus 914 I~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~--qKGidlIleAl~~ll~-- 989 (1198)
|+||+|.+.|.|. .+...++.++++ .+.++++++|+... .||++.+++|+..+.+
T Consensus 164 i~ngi~~~~~~~~--------------------~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~ 222 (365)
T cd03825 164 IPNGIDTTIFRPR--------------------DKREARKRLGLP-ADKKIILFGAVGGTDPRKGFDELIEALKRLAERW 222 (365)
T ss_pred eCCCCcccccCCC--------------------cHHHHHHHhCCC-CCCeEEEEEecCCCccccCHHHHHHHHHHhhhcc
Confidence 9999999887652 123456777877 35567777777765 8999999999998875
Q ss_pred -CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCC-hHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCc
Q 046057 990 -RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYD-EPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSI 1067 (1198)
Q Consensus 990 -~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d-~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~P 1067 (1198)
.+++|+++|.++.. .. .++ .+++.++|.++ ++.+..+|+.||++++||.+|+||++++|||++|+|
T Consensus 223 ~~~~~~~i~G~~~~~-----~~-----~~~--~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~P 290 (365)
T cd03825 223 KDDIELVVFGASDPE-----IP-----PDL--PFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALACGTP 290 (365)
T ss_pred CCCeEEEEeCCCchh-----hh-----ccC--CCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCC
Confidence 57899999987421 11 122 36799999998 778899999999999999999999999999999999
Q ss_pred EEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccc
Q 046057 1068 PVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQ 1147 (1198)
Q Consensus 1068 vIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1147 (1198)
+|+++.||+.|++.++ .+|++++..|+++++++|.
T Consensus 291 vI~~~~~~~~e~~~~~-------------~~g~~~~~~~~~~~~~~l~-------------------------------- 325 (365)
T cd03825 291 VVAFDVGGIPDIVDHG-------------VTGYLAKPGDPEDLAEGIE-------------------------------- 325 (365)
T ss_pred EEEecCCCChhheeCC-------------CceEEeCCCCHHHHHHHHH--------------------------------
Confidence 9999999999999886 7899999999999996665
Q ss_pred cccchhHHHHHHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHHHHHHHHH
Q 046057 1148 SSMTYDSFRAISAYYDGREWLNSLCKTV---MEQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1148 ~~~~~~~~rAI~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~yielY~~a 1196 (1198)
.+.++++.+.++++++ +.++|||+.++++|+++|+++
T Consensus 326 ------------~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 326 ------------WLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred ------------HHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3346777667777766 557899999999999999864
No 35
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=2.5e-31 Score=292.77 Aligned_cols=350 Identities=20% Similarity=0.221 Sum_probs=258.2
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+..+.+ ||.++++..|+++|.+.||+|.+++........ .. ....|+.+.
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~---~~------------------~~~~~i~v~ 55 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGELG---EE------------------LEEAGVPVY 55 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchhhh---HH------------------HHhcCCeEE
Confidence 68999988854 999999999999999999999999854211000 00 001244454
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
.+...... ....+...+..++++ .+||+||+|.+.+...+.+..... .++|+++++|+.
T Consensus 56 ~~~~~~~~--------------~~~~~~~~~~~~~~~--~~~div~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~ 114 (365)
T cd03807 56 CLGKRPGR--------------PDPGALLRLYKLIRR--LRPDVVHTWMYHADLYGGLAARLA-----GVPPVIWGIRHS 114 (365)
T ss_pred EEeccccc--------------ccHHHHHHHHHHHHh--hCCCEEEeccccccHHHHHHHHhc-----CCCcEEEEecCC
Confidence 44322110 011122334455544 489999999887666655544431 378999999997
Q ss_pred chhh---------hHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhh
Q 046057 871 EFGT---------HHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLV 941 (1198)
Q Consensus 871 ~~~~---------~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~ 941 (1198)
.... .+.+.....+|.++++|+...+.+... +....++.+|+||+|...+.+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---~~~~~~~~vi~~~~~~~~~~~~~-------------- 177 (365)
T cd03807 115 DLDLGKKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAI---GYPPKKIVVIPNGVDTERFSPDL-------------- 177 (365)
T ss_pred cccccchhHhHHHHHHHHhccccCeEEeccHHHHHHHHHc---CCChhheeEeCCCcCHHhcCCcc--------------
Confidence 6541 122334467889999999999888643 34456899999999987766521
Q ss_pred hchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHH-HhCC
Q 046057 942 EGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLAN-ELHS 1018 (1198)
Q Consensus 942 ~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~-eLgl 1018 (1198)
..+..++++++++ .+.++|+++||+.+.||++.+++|+..+.+ ++++|+++|.++.. ..+..+.. ++++
T Consensus 178 ----~~~~~~~~~~~~~-~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~---~~~~~~~~~~~~~ 249 (365)
T cd03807 178 ----DARARLREELGLP-EDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDR---ANLELLALKELGL 249 (365)
T ss_pred ----cchHHHHHhcCCC-CCCeEEEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcch---hHHHHHHHHhcCC
Confidence 1133456778887 467899999999999999999999998875 47999999998543 34444554 6666
Q ss_pred CCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCc
Q 046057 1019 SHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPN 1098 (1198)
Q Consensus 1019 ~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~n 1098 (1198)
.+++.+++..+ ++..+|+.||++++||.+|++|++++|||+||+|+|+++.||..+++.+ +
T Consensus 250 --~~~v~~~g~~~--~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~---------------~ 310 (365)
T cd03807 250 --EDKVILLGERS--DVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD---------------T 310 (365)
T ss_pred --CceEEEccccc--cHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc---------------C
Confidence 47899988654 3689999999999999999999999999999999999999999999864 4
Q ss_pred EEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH---
Q 046057 1099 GFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--- 1175 (1198)
Q Consensus 1099 G~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--- 1175 (1198)
|+++++.|+++++++|. .+.++++.+.++.+++
T Consensus 311 g~~~~~~~~~~l~~~i~--------------------------------------------~l~~~~~~~~~~~~~~~~~ 346 (365)
T cd03807 311 GFLVPPGDPEALAEAIE--------------------------------------------ALLADPALRQALGEAARER 346 (365)
T ss_pred CEEeCCCCHHHHHHHHH--------------------------------------------HHHhChHHHHHHHHHHHHH
Confidence 99999999999996665 3345666666776666
Q ss_pred HHhcCChHHHHHHHHHHHH
Q 046057 1176 MEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1176 m~qdfSW~~~A~~yielY~ 1194 (1198)
..+.|||+.++++|.++|+
T Consensus 347 ~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 347 IEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHhCCHHHHHHHHHHHhC
Confidence 4578999999999999984
No 36
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=5.5e-31 Score=291.28 Aligned_cols=357 Identities=22% Similarity=0.210 Sum_probs=249.8
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+..+.|. ..||.+.++..|+++|+++||+|+++++.......... .. +....
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~----------~~------------~~~~~ 57 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKE----------VI------------GVVVY 57 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccc----------cc------------cceee
Confidence 699999988885 47999999999999999999999999976332111000 00 00000
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
..........................+...+.+++.+ .+||+||+|.+.......+..... .++|+|+++|+.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dii~~~~~~~~~~~~~~~~~~-----~~~~~i~~~hd~ 130 (359)
T cd03823 58 GRPIDEVLRSALPRDLFHLSDYDNPAVVAEFARLLED--FRPDVVHFHHLQGLGVSILRAARD-----RGIPIVLTLHDY 130 (359)
T ss_pred ccccccccCCCchhhhhHHHhccCHHHHHHHHHHHHH--cCCCEEEECCccchHHHHHHHHHh-----cCCCEEEEEeee
Confidence 0000000000000000000000011223334455544 489999999874333222211111 268999999987
Q ss_pred chhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHH
Q 046057 871 EFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEA 950 (1198)
Q Consensus 871 ~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~a 950 (1198)
.+............|.++++|+...+.+..... ...++.+|+||+|...+.+...
T Consensus 131 ~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~---~~~~~~vi~n~~~~~~~~~~~~---------------------- 185 (359)
T cd03823 131 WLICPRQGLFKKGGDAVIAPSRFLLDRYVANGL---FAEKISVIRNGIDLDRAKRPRR---------------------- 185 (359)
T ss_pred eeecchhhhhccCCCEEEEeCHHHHHHHHHcCC---CccceEEecCCcChhhcccccc----------------------
Confidence 654333333334559999999999998875332 2468999999999887654210
Q ss_pred HHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccC
Q 046057 951 LQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTY 1030 (1198)
Q Consensus 951 Lrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~ 1030 (1198)
+.+ .+.++|+++||+.+.||++.+++|+..+.+.+++|+++|.++... ...... +. .++|.++|.+
T Consensus 186 -----~~~-~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~---~~~~~~---~~--~~~v~~~g~~ 251 (359)
T cd03823 186 -----APP-GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELE---EESYEL---EG--DPRVEFLGAY 251 (359)
T ss_pred -----CCC-CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhh---HHHHhh---cC--CCeEEEeCCC
Confidence 111 356789999999999999999999999877789999999985321 111111 22 4789999999
Q ss_pred ChHHHHHHHHHccEEEEcCC-CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHH
Q 046057 1031 DEPLSHLIYAGADFILVPSI-FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAG 1109 (1198)
Q Consensus 1031 d~~~l~~iyA~ADi~LvPS~-~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~ 1109 (1198)
+.+++..+|+.||++++||. .|++|++++|||+||+|+|++++||..+++.++ .+|+++++.|+++
T Consensus 252 ~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~-------------~~g~~~~~~d~~~ 318 (359)
T cd03823 252 PQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDG-------------VNGLLFPPGDAED 318 (359)
T ss_pred CHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCC-------------CcEEEECCCCHHH
Confidence 99999999999999999998 699999999999999999999999999999886 7899999999999
Q ss_pred HHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHH
Q 046057 1110 VDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDY 1189 (1198)
Q Consensus 1110 La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~y 1189 (1198)
++++|. .+.++++.+..+++++.. .++.+.++++|
T Consensus 319 l~~~i~--------------------------------------------~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 353 (359)
T cd03823 319 LAAALE--------------------------------------------RLIDDPDLLERLRAGIEP-PRSIEDQAEEY 353 (359)
T ss_pred HHHHHH--------------------------------------------HHHhChHHHHHHHHhHHH-hhhHHHHHHHH
Confidence 996655 444678888888888744 45569999999
Q ss_pred HHHHH
Q 046057 1190 MELYR 1194 (1198)
Q Consensus 1190 ielY~ 1194 (1198)
+++|+
T Consensus 354 ~~~~~ 358 (359)
T cd03823 354 LKLYR 358 (359)
T ss_pred HHHhh
Confidence 99996
No 37
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=5.1e-31 Score=294.78 Aligned_cols=343 Identities=19% Similarity=0.196 Sum_probs=248.5
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+..+.|. .||.++++..|+++|.++||+|+|++.......... ...+..+.
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~----------------------~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRDE----------------------ERNGHRVI 56 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchhh----------------------hccCceEE
Confidence 799999999884 899999999999999999999999986532211000 00111222
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
.+......... . + .......+.....+|||||+|.............. .+.|+++++|+.
T Consensus 57 ~~~~~~~~~~~----~-------~---~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~------~~~~~i~~~h~~ 116 (357)
T cd03795 57 RAPSLLNVAST----P-------F---SPSFFKQLKKLAKKADVIHLHFPNPLADLALLLLP------RKKPVVVHWHSD 116 (357)
T ss_pred Eeecccccccc----c-------c---cHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHhc------cCceEEEEEcCh
Confidence 22111000000 0 0 00111111123468999999974432222111111 278999999975
Q ss_pred chh--------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhh
Q 046057 871 EFG--------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVE 942 (1198)
Q Consensus 871 ~~~--------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~ 942 (1198)
.+. ..+.+..+..+|.++++|+.+.+.+.... ....++.+|+||+|.+.|.+...
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~~~---~~~~~~~~i~~gi~~~~~~~~~~-------------- 179 (357)
T cd03795 117 IVKQKLLLKLYRPLQRRFLRRADAIVATSPNYAETSPVLR---RFRDKVRVIPLGLDPARYPRPDA-------------- 179 (357)
T ss_pred hhccchhhhhhhHHHHHHHHhcCEEEeCcHHHHHHHHHhc---CCccceEEecCCCChhhcCCcch--------------
Confidence 432 23445677899999999999998775322 12268999999999988765211
Q ss_pred chHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCC
Q 046057 943 GKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHAD 1022 (1198)
Q Consensus 943 gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~d 1022 (1198)
.+. .....+ .+.++|+++||+.+.||++.+++|+..+. +++|+|+|+|+ ....+.++++++++ .+
T Consensus 180 ----~~~---~~~~~~-~~~~~i~~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~---~~~~~~~~~~~~~~--~~ 244 (357)
T cd03795 180 ----LEE---AIWRRA-AGRPFFLFVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP---LEAELEALAAALGL--LD 244 (357)
T ss_pred ----hhh---HhhcCC-CCCcEEEEecccccccCHHHHHHHHHhcc--CcEEEEEeCCh---hHHHHHHHHHhcCC--cc
Confidence 000 112222 36789999999999999999999999986 89999999985 35678888877776 37
Q ss_pred cEEEEccCChHHHHHHHHHccEEEEcCC--CCCCcHHHHHHHHhCCcEEEeCCccccccccc-cccchhhhhccCCCCcE
Q 046057 1023 RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD-VDHDKERAQALDLEPNG 1099 (1198)
Q Consensus 1023 rV~f~g~~d~~~l~~iyA~ADi~LvPS~--~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d-~d~~~~~~~~~~~~~nG 1099 (1198)
+|.|+|.++.+.+..+|+.||++++||. .|+||++++|||++|+|+|+++.|+..+.+.+ + .+|
T Consensus 245 ~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~-------------~~g 311 (357)
T cd03795 245 RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHG-------------VTG 311 (357)
T ss_pred eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCC-------------Cce
Confidence 8999999999999999999999999996 59999999999999999999999999999886 5 799
Q ss_pred EEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH---H
Q 046057 1100 FSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV---M 1176 (1198)
Q Consensus 1100 ~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a---m 1176 (1198)
+++++.|+++++++|. .+.++++.+.++++++ +
T Consensus 312 ~~~~~~d~~~~~~~i~--------------------------------------------~l~~~~~~~~~~~~~~~~~~ 347 (357)
T cd03795 312 LVVPPGDPAALAEAIR--------------------------------------------RLLEDPELRERLGEAARERA 347 (357)
T ss_pred EEeCCCCHHHHHHHHH--------------------------------------------HHHHCHHHHHHHHHHHHHHH
Confidence 9999999999996665 4446778778888777 5
Q ss_pred HhcCChHHHH
Q 046057 1177 EQDWSWNRPA 1186 (1198)
Q Consensus 1177 ~qdfSW~~~A 1186 (1198)
.+.|||+.+|
T Consensus 348 ~~~~s~~~~~ 357 (357)
T cd03795 348 EEEFTADRMV 357 (357)
T ss_pred HHhcchHhhC
Confidence 6789998764
No 38
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=5.3e-31 Score=291.24 Aligned_cols=354 Identities=19% Similarity=0.222 Sum_probs=248.5
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+..+.| ..||.+.++..|+++|++.||+|+++++.......... . . .. ...
T Consensus 1 kIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-~---------~--~~----------~~~ 56 (375)
T cd03821 1 KILHVIPSFDP--KYGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVA-L---------N--GV----------PVK 56 (375)
T ss_pred CeEEEcCCCCc--ccCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhh-c---------c--Cc----------eee
Confidence 69999998886 58999999999999999999999999976332111000 0 0 00 000
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECC-CChhHH-HHHHHHhhhhcCCCCCeEEEEec
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHD-WSSAPV-AWLFKDHYVHYGLSKARIVFTIH 868 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hd-w~ta~v-a~llk~~y~~~gl~~ipvV~tIH 868 (1198)
........... .....+......++.....+|||||+|+ |..... ...+... .++|+|+++|
T Consensus 57 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~ 120 (375)
T cd03821 57 LFSINVAYGLN----------LARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARK------YGIPYVVSPH 120 (375)
T ss_pred ecccchhhhhh----------hhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHH------hCCCEEEEcc
Confidence 00000000000 0000111112233333346899999998 332222 2222222 2789999999
Q ss_pred CCchhh--------h------HHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcc
Q 046057 869 NLEFGT--------H------HIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVS 934 (1198)
Q Consensus 869 n~~~~~--------~------li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ 934 (1198)
+..... . ..+..+..++.++++|......+... ....++.+|+||+|.+.|.+...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~----~~~~~~~vi~~~~~~~~~~~~~~------ 190 (375)
T cd03821 121 GMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRRL----GLKAPIAVIPNGVDIPPFAALPS------ 190 (375)
T ss_pred ccccccccccchhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhh----CCcccEEEcCCCcChhccCcchh------
Confidence 864321 1 12334567899999997777666421 23468999999999988765210
Q ss_pred cccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHH
Q 046057 935 YTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNL 1012 (1198)
Q Consensus 935 ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~l 1012 (1198)
. ..++.++.+ .+.++|+++||+.+.||++.+++|+..+.+ ++++|+++|.+ +......+..+
T Consensus 191 -------------~-~~~~~~~~~-~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~-~~~~~~~~~~~ 254 (375)
T cd03821 191 -------------R-GRRRKFPIL-PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPD-EGGYRAELKQI 254 (375)
T ss_pred -------------h-hhhhhccCC-CCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCC-CcchHHHHHHH
Confidence 0 114555555 467899999999999999999999999886 58999999987 33455666666
Q ss_pred HHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhc
Q 046057 1013 ANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQA 1092 (1198)
Q Consensus 1013 a~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~ 1092 (1198)
+.++++ .++|.|+|.++.+++..+|+.||++|+||.+|+||++++|||+||+|+|+++.||+.+++.+
T Consensus 255 ~~~~~~--~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~---------- 322 (375)
T cd03821 255 AAALGL--EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY---------- 322 (375)
T ss_pred HHhcCc--cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc----------
Confidence 677777 47899999999888999999999999999999999999999999999999999999999976
Q ss_pred cCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHH
Q 046057 1093 LDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLC 1172 (1198)
Q Consensus 1093 ~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~ 1172 (1198)
.+|++++. ++++++++|. .+.++++.+.+++
T Consensus 323 ----~~~~~~~~-~~~~~~~~i~--------------------------------------------~l~~~~~~~~~~~ 353 (375)
T cd03821 323 ----GCGWVVDD-DVDALAAALR--------------------------------------------RALELPQRLKAMG 353 (375)
T ss_pred ----CceEEeCC-ChHHHHHHHH--------------------------------------------HHHhCHHHHHHHH
Confidence 46888866 5588885555 4446666667776
Q ss_pred HHH---HHhcCChHHHHHHHHH
Q 046057 1173 KTV---MEQDWSWNRPALDYME 1191 (1198)
Q Consensus 1173 ~~a---m~qdfSW~~~A~~yie 1191 (1198)
+++ +.+.|+|+.++++|++
T Consensus 354 ~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 354 ENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHhcCHHHHHHHhhC
Confidence 666 4789999999999863
No 39
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=2.8e-31 Score=299.98 Aligned_cols=341 Identities=16% Similarity=0.130 Sum_probs=249.1
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||+++...+.| +.++++..+++.|+ ||+|.+++.......... . ....+.
T Consensus 1 ~~~~~~~~~~~-----~~e~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~-------------~----------~~~~~~ 50 (367)
T cd05844 1 RVLIFRPLLLA-----PSETFVRNQAEALR--RFRPVYVGGRRLGPAPLG-------------A----------LAVRLA 50 (367)
T ss_pred CEEEEeCCCCC-----CchHHHHHHHHhcc--cCCcEEEEeeccCCCCCc-------------c----------cceeee
Confidence 58889888877 37999999999995 788888875422110000 0 000111
Q ss_pred EeCCCCCccccccccCCCCchhh-HHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKER-FAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHN 869 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~R-f~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn 869 (1198)
.+...... . .....+ +..+...+..+++. .+|||||+|+...++.+..+.... ++|+|+++|+
T Consensus 51 ~~~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~--~~~dvvh~~~~~~~~~~~~~~~~~------~~p~i~~~h~ 114 (367)
T cd05844 51 DLAGGKAG--L------RLGALRLLTGSAPQLRRLLRR--HRPDLVHAHFGFDGVYALPLARRL------GVPLVVTFHG 114 (367)
T ss_pred ecccchhH--H------HHHHHHhccccccHHHHHHHh--hCCCEEEeccCchHHHHHHHHHHc------CCCEEEEEeC
Confidence 11000000 0 000000 01112223333443 589999999766666555554443 7999999996
Q ss_pred Cchh--------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCccc
Q 046057 870 LEFG--------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSY 935 (1198)
Q Consensus 870 ~~~~--------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~y 935 (1198)
.... ..+.+..+..+|.++++|+...+.+... +....++.+|+||+|.+.+.|...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---~~~~~~i~vi~~g~d~~~~~~~~~------- 184 (367)
T cd05844 115 FDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIRDRLLAL---GFPPEKVHVHPIGVDTAKFTPATP------- 184 (367)
T ss_pred ccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHHHHHHHc---CCCHHHeEEecCCCCHHhcCCCCC-------
Confidence 5321 1123456678999999999999988743 334568999999999887765210
Q ss_pred ccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHH
Q 046057 936 TSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLA 1013 (1198)
Q Consensus 936 s~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la 1013 (1198)
..+.++|+++|++.+.||++.+++|+..+.+ ++++|+++|.++ ..+.++.++
T Consensus 185 -----------------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~---~~~~~~~~~ 238 (367)
T cd05844 185 -----------------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP---LLAALEALA 238 (367)
T ss_pred -----------------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch---HHHHHHHHH
Confidence 1245689999999999999999999998875 479999999874 356788889
Q ss_pred HHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCC------CCCCcHHHHHHHHhCCcEEEeCCccccccccccccch
Q 046057 1014 NELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSI------FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDK 1087 (1198)
Q Consensus 1014 ~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~------~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~ 1087 (1198)
+++++ .++|.|+|.++.+.+..+|+.||++++||. .|+||++++|||+||+|+|+++.||..|++.++
T Consensus 239 ~~~~~--~~~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~---- 312 (367)
T cd05844 239 RALGL--GGRVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDG---- 312 (367)
T ss_pred HHcCC--CCeEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecC----
Confidence 98887 478999999998999999999999999997 599999999999999999999999999999886
Q ss_pred hhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHH
Q 046057 1088 ERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREW 1167 (1198)
Q Consensus 1088 ~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~ 1167 (1198)
.+|+++++.|+++++++|. .+.++++.
T Consensus 313 ---------~~g~~~~~~d~~~l~~~i~--------------------------------------------~l~~~~~~ 339 (367)
T cd05844 313 ---------ETGLLVPEGDVAALAAALG--------------------------------------------RLLADPDL 339 (367)
T ss_pred ---------CeeEEECCCCHHHHHHHHH--------------------------------------------HHHcCHHH
Confidence 7999999999999996655 44467777
Q ss_pred HHHHHHHH---HHhcCChHHHHHHHHHH
Q 046057 1168 LNSLCKTV---MEQDWSWNRPALDYMEL 1192 (1198)
Q Consensus 1168 ~~~L~~~a---m~qdfSW~~~A~~yiel 1192 (1198)
+.+++.++ +.+.|||+..+.+|.++
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~~i 367 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLEAL 367 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 77777766 45789999999998763
No 40
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=2.4e-30 Score=282.49 Aligned_cols=356 Identities=26% Similarity=0.366 Sum_probs=264.1
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+..+.|. .||.+.++..|+++|.+.||+|.++++........... ......
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV----------------------GGIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee----------------------cCccee
Confidence 699999988874 69999999999999999999999999764432110000 000000
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
........ ........+...+..++.. .+||+||+|.+........+... .++|+|+++|+.
T Consensus 57 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--~~~Dii~~~~~~~~~~~~~~~~~------~~~~~i~~~h~~ 118 (374)
T cd03801 57 RPPPLLRV----------RRLLLLLLLALRLRRLLRR--ERFDVVHAHDWLALLAAALAARL------LGIPLVLTVHGL 118 (374)
T ss_pred cCCccccc----------chhHHHHHHHHHHHHHhhh--cCCcEEEEechhHHHHHHHHHHh------cCCcEEEEeccc
Confidence 00000000 0000111222333344443 48999999998776665433332 389999999998
Q ss_pred chhh-------------hHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCccccc
Q 046057 871 EFGT-------------HHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTS 937 (1198)
Q Consensus 871 ~~~~-------------~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~ 937 (1198)
.+.. ......+..+|.++++|+...+.+.... .....++.+|+||+|...+.+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~---------- 186 (374)
T cd03801 119 EFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRELG--GVPPEKITVIPNGVDTERFRPAP---------- 186 (374)
T ss_pred hhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcC--CCCCCcEEEecCcccccccCccc----------
Confidence 7542 2344567889999999999999997432 22246899999999988776520
Q ss_pred chhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC--CcEEEEEecCCChhhHHHHHHHHHH
Q 046057 938 ENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR--GGQVVLLGSAPDPRIQNDFVNLANE 1015 (1198)
Q Consensus 938 ~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~--~~qLVIvGsgpdp~i~~~L~~la~e 1015 (1198)
...+...... .+.+.|+++|++.+.||++.+++|+..+.+. +++|+++|+++ ....+..++++
T Consensus 187 -----------~~~~~~~~~~-~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~---~~~~~~~~~~~ 251 (374)
T cd03801 187 -----------RAARRRLGIP-EDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP---LREELEALAAE 251 (374)
T ss_pred -----------hHHHhhcCCc-CCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH---HHHHHHHHHHH
Confidence 1122233333 3567999999999999999999999988764 79999999763 35667777777
Q ss_pred hCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCC
Q 046057 1016 LHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDL 1095 (1198)
Q Consensus 1016 Lgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~ 1095 (1198)
++. +++|.+++.++.+++..+|+.||++++||..|++|++++|||++|+|+|+++.+|..+++.++
T Consensus 252 ~~~--~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~------------ 317 (374)
T cd03801 252 LGL--GDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDG------------ 317 (374)
T ss_pred hCC--CcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCC------------
Confidence 776 478999999998889999999999999999999999999999999999999999999999876
Q ss_pred CCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH
Q 046057 1096 EPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV 1175 (1198)
Q Consensus 1096 ~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a 1175 (1198)
.+|+++++.|+++++++|. .+..+++.+.++.+++
T Consensus 318 -~~g~~~~~~~~~~l~~~i~--------------------------------------------~~~~~~~~~~~~~~~~ 352 (374)
T cd03801 318 -ETGLLVPPGDPEALAEAIL--------------------------------------------RLLDDPELRRRLGEAA 352 (374)
T ss_pred -cceEEeCCCCHHHHHHHHH--------------------------------------------HHHcChHHHHHHHHHH
Confidence 7899999999999996665 3446777777787776
Q ss_pred ---HHhcCChHHHHHHHHHHHH
Q 046057 1176 ---MEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1176 ---m~qdfSW~~~A~~yielY~ 1194 (1198)
..+.|+|+..++++.++|+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 353 RERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHhcCHHHHHHHHHHhhC
Confidence 3678999999999999874
No 41
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=4.7e-31 Score=309.11 Aligned_cols=317 Identities=12% Similarity=0.043 Sum_probs=208.0
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCe-E
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGL-S 788 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv-~ 788 (1198)
||||+|.+.+ ..||+|+++.+|++.|.++||+|.+++-......... . .++. .
T Consensus 1 mkil~i~~~l----~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~---~-------------------~~~~~~ 54 (405)
T PRK10125 1 MNILQFNVRL----AEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESV---S-------------------HQNYPQ 54 (405)
T ss_pred CeEEEEEeee----cCCchhHHHHHHHHHHHhcCCeEEEEEecCCCccccc---c-------------------cCCcce
Confidence 8999998755 5799999999999999999999999986522211000 0 0000 0
Q ss_pred EEEeCCCCCccccccccCCCCchhhHHHHH-HHHHHHHHhcCCCceEEEECCCChhHHHH--HHHH-hhhhcCCCCCeEE
Q 046057 789 VYFLEPQNGFFSKGCVYGCNNDKERFAFFC-HAALEFLLQGGFHPDIIHCHDWSSAPVAW--LFKD-HYVHYGLSKARIV 864 (1198)
Q Consensus 789 v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~-~aale~L~~~~~~PDVIH~Hdw~ta~va~--llk~-~y~~~gl~~ipvV 864 (1198)
++.+.+....... ....+ -..+..+++ .+..+++.. .++|||||+|..+++.+.. ++.. ........++|+|
T Consensus 55 ~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~i~~-~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV 130 (405)
T PRK10125 55 VIKHTPRMTAMAN-IALFR--LFNRDLFGNFNELYRTITR-TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLV 130 (405)
T ss_pred EEEecccHHHHHH-HHHHH--hcchhhcchHHHHHHHHhh-ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEE
Confidence 1111100000000 00000 000111222 233344433 5799999999877643322 2211 0001122478999
Q ss_pred EEecCCchhh------------------------------h-----------HHHHHHhccCEEEEeCHHHHHHHhCCCC
Q 046057 865 FTIHNLEFGT------------------------------H-----------HIGKAMTYADKATTVSHTYSKEVAGDPA 903 (1198)
Q Consensus 865 ~tIHn~~~~~------------------------------~-----------li~~~~~~AD~VitVS~~~a~el~~~~~ 903 (1198)
+|.|+..... . .+......++.++++|...++.+.. .
T Consensus 131 ~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~--~ 208 (405)
T PRK10125 131 WTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNS--L 208 (405)
T ss_pred EecccccccCCCcCCCcccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHH--H
Confidence 9999986320 0 1122234468899999999998763 2
Q ss_pred CCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecC--CCccCHHHHH
Q 046057 904 IAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRL--THQKGIHLIK 981 (1198)
Q Consensus 904 l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL--~~qKGidlIl 981 (1198)
++ ..++.+|+||||++.+.+..+. ...+ .+ ++.++|+++||+ .+.||++.++
T Consensus 209 ~~--~~~i~vI~NGid~~~~~~~~~~---------------~~~~--------~~-~~~~~il~v~~~~~~~~Kg~~~li 262 (405)
T PRK10125 209 YG--PGRCRIINNGIDMATEAILAEL---------------PPVR--------ET-QGKPKIAVVAHDLRYDGKTDQQLV 262 (405)
T ss_pred cC--CCCEEEeCCCcCcccccccccc---------------cccc--------cC-CCCCEEEEEEeccccCCccHHHHH
Confidence 22 3689999999997544331100 0000 01 356789999994 3789999999
Q ss_pred HHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccC-ChHHHHHHHHHccEEEEcCCCCCCcHHHHH
Q 046057 982 HAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTY-DEPLSHLIYAGADFILVPSIFEPCGLTQLV 1060 (1198)
Q Consensus 982 eAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~-d~~~l~~iyA~ADi~LvPS~~EpfGLt~LE 1060 (1198)
+|+..+. .+++|+|+|.++. .. ..++.+++.. +...+..+|++||++|+||.+|+||++++|
T Consensus 263 ~A~~~l~-~~~~L~ivG~g~~-~~---------------~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilE 325 (405)
T PRK10125 263 REMMALG-DKIELHTFGKFSP-FT---------------AGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCE 325 (405)
T ss_pred HHHHhCC-CCeEEEEEcCCCc-cc---------------ccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHH
Confidence 9998873 5789999998742 10 1357777654 567788999999999999999999999999
Q ss_pred HHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1061 AMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1061 AMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
||+||+|||+|++||++|+|.+ .+|++|+++|+++|+++++
T Consensus 326 AmA~G~PVVat~~gG~~Eiv~~--------------~~G~lv~~~d~~~La~~~~ 366 (405)
T PRK10125 326 ALSIGVPVIATHSDAAREVLQK--------------SGGKTVSEEEVLQLAQLSK 366 (405)
T ss_pred HHHcCCCEEEeCCCChHHhEeC--------------CcEEEECCCCHHHHHhccC
Confidence 9999999999999999999865 4799999999999995443
No 42
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=2.6e-30 Score=287.80 Aligned_cols=350 Identities=17% Similarity=0.138 Sum_probs=243.4
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+.. .| ..||.++++..|+++|.+.||+|.+++.......... .. . . .+...
T Consensus 1 kI~~v~~~-~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~-----------~~-~-~-------~~~~~- 56 (366)
T cd03822 1 RIALVSPY-PP--RKCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLY-----------GG-E-Q-------EVVRV- 56 (366)
T ss_pred CeEEecCC-CC--CCCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccC-----------CC-c-c-------cceee-
Confidence 68999764 45 3799999999999999999999999986532111000 00 0 0 00000
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
+.... + .....+.+.++. .+|||||+|.|.+...+.............++|+|+++|+.
T Consensus 57 -~~~~~----------------~--~~~~~~~~~~~~--~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~ 115 (366)
T cd03822 57 -IVLDN----------------P--LDYRRAARAIRL--SGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTV 115 (366)
T ss_pred -eecCC----------------c--hhHHHHHHHHhh--cCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecC
Confidence 00000 0 011223444444 48999999986432221111111000011388999999996
Q ss_pred ch------hhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhch
Q 046057 871 EF------GTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGK 944 (1198)
Q Consensus 871 ~~------~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk 944 (1198)
.. ...+.+..+..+|.++++|......+.... ...++.+|+||+|...+.+..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~----------------- 174 (366)
T cd03822 116 LLHEPRPGDRALLRLLLRRADAVIVMSSELLRALLLRA----YPEKIAVIPHGVPDPPAEPPE----------------- 174 (366)
T ss_pred CccccchhhhHHHHHHHhcCCEEEEeeHHHHHHHHhhc----CCCcEEEeCCCCcCcccCCch-----------------
Confidence 21 133556677899999999754444443211 146899999999976654310
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHH---HHHHHhCCC
Q 046057 945 RAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFV---NLANELHSS 1019 (1198)
Q Consensus 945 ~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~---~la~eLgl~ 1019 (1198)
. . ++...+ .+.++|+++||+.+.||++.+++|+..+.+ ++++|+++|.++... ..... ++++++++
T Consensus 175 ---~--~-~~~~~~-~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~-~~~~~~~~~~i~~~~~- 245 (366)
T cd03822 175 ---S--L-KALGGL-DGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDL-ERYRGEAYALAERLGL- 245 (366)
T ss_pred ---h--h-HhhcCC-CCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccch-hhhhhhhHhHHHhcCC-
Confidence 0 0 222222 367899999999999999999999999876 479999999874321 11111 34677777
Q ss_pred CCCcEEEEcc-CChHHHHHHHHHccEEEEcCCCC--CCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCC
Q 046057 1020 HADRARLCLT-YDEPLSHLIYAGADFILVPSIFE--PCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLE 1096 (1198)
Q Consensus 1020 ~~drV~f~g~-~d~~~l~~iyA~ADi~LvPS~~E--pfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~ 1096 (1198)
.++|.|+++ ++.+++..+|+.||++++||.+| ++|++++|||++|+|+|++++|| .+.+.+.
T Consensus 246 -~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~------------- 310 (366)
T cd03822 246 -ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDG------------- 310 (366)
T ss_pred -CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeC-------------
Confidence 478999998 78888999999999999999999 99999999999999999999999 7777665
Q ss_pred CcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH-
Q 046057 1097 PNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV- 1175 (1198)
Q Consensus 1097 ~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a- 1175 (1198)
.+|+++++.|+++++++|. .+.++++.+.++++++
T Consensus 311 ~~g~~~~~~d~~~~~~~l~--------------------------------------------~l~~~~~~~~~~~~~~~ 346 (366)
T cd03822 311 GTGLLVPPGDPAALAEAIR--------------------------------------------RLLADPELAQALRARAR 346 (366)
T ss_pred CCcEEEcCCCHHHHHHHHH--------------------------------------------HHHcChHHHHHHHHHHH
Confidence 7899999999999995555 4456777778888777
Q ss_pred -HHhcCChHHHHHHHHHHHH
Q 046057 1176 -MEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1176 -m~qdfSW~~~A~~yielY~ 1194 (1198)
..+.|||+.++++|.++|+
T Consensus 347 ~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 347 EYARAMSWERVAERYLRLLA 366 (366)
T ss_pred HHHhhCCHHHHHHHHHHHhC
Confidence 3345999999999999984
No 43
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=6.1e-31 Score=295.30 Aligned_cols=314 Identities=17% Similarity=0.166 Sum_probs=228.3
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+..+ ..||.+.++..|+++|.+.||+|+++++........ . .....|+.++
T Consensus 1 kIl~~~~~~----~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~~~~--~------------------~~~~~~~~~~ 56 (358)
T cd03812 1 KILHIVGTM----NRGGIETFIMNYYRNLDRSKIQFDFLVTSKEEGDYD--D------------------EIEKLGGKIY 56 (358)
T ss_pred CEEEEeCCC----CCccHHHHHHHHHHhcCccceEEEEEEeCCCCcchH--H------------------HHHHcCCeEE
Confidence 689998766 379999999999999999999999999763320000 0 0111244444
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
.+..... ++..+...+..++.+ .+|||||+|......++.++.... ....+|++.|+.
T Consensus 57 ~~~~~~~---------------~~~~~~~~~~~~~~~--~~~Dvv~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~ 114 (358)
T cd03812 57 YIPARKK---------------NPLKYFKKLYKLIKK--NKYDIVHVHGSSASGFILLAAKKA-----GVKVRIAHSHNT 114 (358)
T ss_pred EecCCCc---------------cHHHHHHHHHHHHhc--CCCCEEEEeCcchhHHHHHHHhhC-----CCCeEEEEeccc
Confidence 3332110 111222334444443 589999999876555554444332 133457888887
Q ss_pred chhhh----------HHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchh
Q 046057 871 EFGTH----------HIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENL 940 (1198)
Q Consensus 871 ~~~~~----------li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~ 940 (1198)
.+... +....+..++.++++|+..++.+... ....++.+|+||+|.+.|.+...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~----~~~~~~~vi~ngvd~~~~~~~~~------------ 178 (358)
T cd03812 115 SDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK----VKNKKFKVIPNGIDLEKFIFNEE------------ 178 (358)
T ss_pred cccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----CCcccEEEEeccCcHHHcCCCch------------
Confidence 54311 12345577999999999999888643 23568999999999987765211
Q ss_pred hhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCC
Q 046057 941 VEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHS 1018 (1198)
Q Consensus 941 ~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl 1018 (1198)
.+.. ++..+.. .+.++|+++||+.++||++.+++|+..+.+ ++++|+|+|+|+. ...++++++++++
T Consensus 179 ------~~~~-~~~~~~~-~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~---~~~~~~~~~~~~~ 247 (358)
T cd03812 179 ------IRKK-RRELGIL-EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGEL---EEEIKKKVKELGL 247 (358)
T ss_pred ------hhhH-HHHcCCC-CCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCch---HHHHHHHHHhcCC
Confidence 1111 4445554 477899999999999999999999999975 4799999999863 5677888888877
Q ss_pred CCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCc
Q 046057 1019 SHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPN 1098 (1198)
Q Consensus 1019 ~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~n 1098 (1198)
.++|.|+|.. +.+..+|+.||++|+||.+|+||++++|||++|+|||+++.||.++++.++ .
T Consensus 248 --~~~v~~~g~~--~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~--------------~ 309 (358)
T cd03812 248 --EDKVIFLGVR--NDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDL--------------V 309 (358)
T ss_pred --CCcEEEeccc--CCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccC--------------c
Confidence 4789998873 346789999999999999999999999999999999999999999999873 5
Q ss_pred EEEEcCCCHHHHHHHHh
Q 046057 1099 GFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1099 G~lf~~~D~~~La~AL~ 1115 (1198)
|++..++++++++++|.
T Consensus 310 ~~~~~~~~~~~~a~~i~ 326 (358)
T cd03812 310 KFLSLDESPEIWAEEIL 326 (358)
T ss_pred cEEeCCCCHHHHHHHHH
Confidence 77777778999996655
No 44
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=4.5e-31 Score=302.39 Aligned_cols=346 Identities=17% Similarity=0.151 Sum_probs=243.8
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhC--CCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCe
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDL--NHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGL 787 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~--GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv 787 (1198)
|||++++..+ | ..||.++++..|+++|.++ ||+|.++++.... .......+... . .....
T Consensus 1 mkI~~~~~~~-~--~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~-~~~~~~~~~~~---------~-----~~~~~ 62 (359)
T PRK09922 1 MKIAFIGEAV-S--GFGGMETVISNVINTFEESKINCEMFFFCRNDKM-DKAWLKEIKYA---------Q-----SFSNI 62 (359)
T ss_pred CeeEEecccc-c--CCCchhHHHHHHHHHhhhcCcceeEEEEecCCCC-ChHHHHhcchh---------c-----ccccc
Confidence 8999998644 3 4699999999999999999 8999988875331 10000000000 0 00000
Q ss_pred EEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEe
Q 046057 788 SVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTI 867 (1198)
Q Consensus 788 ~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tI 867 (1198)
.+.++. . . .....+.+++++ .+|||||||+....+++.+++... + ...+++.+.
T Consensus 63 ~~~~~~-------~------------~-~~~~~l~~~l~~--~~~Dii~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~ 116 (359)
T PRK09922 63 KLSFLR-------R------------A-KHVYNFSKWLKE--TQPDIVICIDVISCLYANKARKKS---G-KQFKIFSWP 116 (359)
T ss_pred hhhhhc-------c------------c-HHHHHHHHHHHh--cCCCEEEEcCHHHHHHHHHHHHHh---C-CCCeEEEEe
Confidence 000000 0 0 012334455655 489999999865555555554433 1 134567777
Q ss_pred cCCchhhh-HHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCC-CCCCCCCCcccccchhhhchH
Q 046057 868 HNLEFGTH-HIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWD-PFNDKFIPVSYTSENLVEGKR 945 (1198)
Q Consensus 868 Hn~~~~~~-li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~-P~~D~~Lp~~ys~~~~~~gk~ 945 (1198)
|....... .....+..+|.++++|+...+.+... +....++.+|+||||.+.+. |...
T Consensus 117 h~~~~~~~~~~~~~~~~~d~~i~~S~~~~~~~~~~---~~~~~ki~vi~N~id~~~~~~~~~~----------------- 176 (359)
T PRK09922 117 HFSLDHKKHAECKKITCADYHLAISSGIKEQMMAR---GISAQRISVIYNPVEIKTIIIPPPE----------------- 176 (359)
T ss_pred cCcccccchhhhhhhhcCCEEEEcCHHHHHHHHHc---CCCHHHEEEEcCCCCHHHccCCCcc-----------------
Confidence 75432111 11123478999999999999998743 33456899999999965432 2100
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEecCC--CccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCc
Q 046057 946 AAKEALQQKVGLRKSDLPLVGIITRLT--HQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADR 1023 (1198)
Q Consensus 946 ~~k~aLrq~lGL~~~d~plIg~VGRL~--~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~dr 1023 (1198)
..+.++++++||+. ++||++.+++|+..+. .+++|+|+|+|++ .+.++++++++++ +++
T Consensus 177 -------------~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~-~~~~l~ivG~g~~---~~~l~~~~~~~~l--~~~ 237 (359)
T PRK09922 177 -------------RDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT-GEWQLHIIGDGSD---FEKCKAYSRELGI--EQR 237 (359)
T ss_pred -------------cCCCcEEEEEEEEecccCcCHHHHHHHHHhhC-CCeEEEEEeCCcc---HHHHHHHHHHcCC--CCe
Confidence 02457899999996 5699999999998874 3799999999864 5778999999887 478
Q ss_pred EEEEccCCh--HHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeC-CccccccccccccchhhhhccCCCCcEE
Q 046057 1024 ARLCLTYDE--PLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRK-TGGLYDTVFDVDHDKERAQALDLEPNGF 1100 (1198)
Q Consensus 1024 V~f~g~~d~--~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~-tGGl~E~V~d~d~~~~~~~~~~~~~nG~ 1100 (1198)
|.|+|..+. +.+..+|+.||++|+||.+|+||++++|||+||+|||+++ .||+.|+|.++ .+|+
T Consensus 238 v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~-------------~~G~ 304 (359)
T PRK09922 238 IIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPG-------------LNGE 304 (359)
T ss_pred EEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCC-------------CceE
Confidence 999997643 6788999999999999999999999999999999999999 89999999987 8999
Q ss_pred EEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHH--HHHHHHHHHHh
Q 046057 1101 SFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREW--LNSLCKTVMEQ 1178 (1198)
Q Consensus 1101 lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~--~~~L~~~am~q 1178 (1198)
+++++|+++++++|. .+.++++. ...+.++ ..
T Consensus 305 lv~~~d~~~la~~i~--------------------------------------------~l~~~~~~~~~~~~~~~--~~ 338 (359)
T PRK09922 305 LYTPGNIDEFVGKLN--------------------------------------------KVISGEVKYQHDAIPNS--IE 338 (359)
T ss_pred EECCCCHHHHHHHHH--------------------------------------------HHHhCcccCCHHHHHHH--HH
Confidence 999999999997777 22333432 1222333 25
Q ss_pred cCChHHHHHHHHHHHHHHh
Q 046057 1179 DWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1179 dfSW~~~A~~yielY~~a~ 1197 (1198)
+|+-+....++.++|.++.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~ 357 (359)
T PRK09922 339 RFYEVLYFKNLNNALFSKL 357 (359)
T ss_pred HhhHHHHHHHHHHHHHHHh
Confidence 6888899999999988753
No 45
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3e-30 Score=286.55 Aligned_cols=346 Identities=21% Similarity=0.214 Sum_probs=250.0
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+..+.|. .||.+.++..|+++|+++||+|+++++.......... ....+...........
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~ 65 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-------------RVVPVPSVPLPGYPEI 65 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-------------CceeecccccCcccce
Confidence 699999999883 6999999999999999999999999976332110000 0011110000000000
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChh-HHHHHHHHhhhhcCCCCCeEEEEecC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSA-PVAWLFKDHYVHYGLSKARIVFTIHN 869 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta-~va~llk~~y~~~gl~~ipvV~tIHn 869 (1198)
.+. + . ....+...++. .+||+||+|..... ..+..+... .++|+++++|+
T Consensus 66 ~~~-----~------------~----~~~~~~~~~~~--~~pdii~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~ 116 (364)
T cd03814 66 RLA-----L------------P----PRRRVRRLLDA--FAPDVVHIATPGPLGLAALRAARR------LGIPVVTSYHT 116 (364)
T ss_pred Eec-----c------------c----chhhHHHHHHh--cCCCEEEEeccchhhHHHHHHHHH------cCCCEEEEEec
Confidence 000 0 0 01112333333 58999999965432 222222222 27899999998
Q ss_pred Cchh--------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCccc
Q 046057 870 LEFG--------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSY 935 (1198)
Q Consensus 870 ~~~~--------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~y 935 (1198)
.... ..+.+.....+|.++++|+...+.+... ...++.+++||+|.+.|.|...
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~------- 184 (364)
T cd03814 117 DFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRAR-----GFRRVRLWPRGVDTELFHPRRR------- 184 (364)
T ss_pred ChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhcc-----CCCceeecCCCccccccCcccc-------
Confidence 6432 1234456678999999999998866432 2357899999999988766321
Q ss_pred ccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc-CCcEEEEEecCCChhhHHHHHHHHH
Q 046057 936 TSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD-RGGQVVLLGSAPDPRIQNDFVNLAN 1014 (1198)
Q Consensus 936 s~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~-~~~qLVIvGsgpdp~i~~~L~~la~ 1014 (1198)
+...+.+++ . .+.++|+++||+.+.||++.+++|+..+.+ .+++|+++|.+++. ..++
T Consensus 185 ------------~~~~~~~~~-~-~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~~---~~~~---- 243 (364)
T cd03814 185 ------------DEALRARLG-P-PDRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPAR---ARLE---- 243 (364)
T ss_pred ------------cHHHHHHhC-C-CCCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCchH---HHHh----
Confidence 112234444 2 356789999999999999999999999876 47999999998532 2222
Q ss_pred HhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccC
Q 046057 1015 ELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALD 1094 (1198)
Q Consensus 1015 eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~ 1094 (1198)
+. .++|.|+|.++.+.+..+|+.||++|+||..|+||++++|||+||+|+|+++.||..+++.++
T Consensus 244 --~~--~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~----------- 308 (364)
T cd03814 244 --AR--YPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDG----------- 308 (364)
T ss_pred --cc--CCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCC-----------
Confidence 22 478999999888889999999999999999999999999999999999999999999999886
Q ss_pred CCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHH
Q 046057 1095 LEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKT 1174 (1198)
Q Consensus 1095 ~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~ 1174 (1198)
.+|+++++.|.++++++|. .+..+++.+.++.++
T Consensus 309 --~~g~~~~~~~~~~l~~~i~--------------------------------------------~l~~~~~~~~~~~~~ 342 (364)
T cd03814 309 --ENGLLVEPGDAEAFAAALA--------------------------------------------ALLADPELRRRMAAR 342 (364)
T ss_pred --cceEEcCCCCHHHHHHHHH--------------------------------------------HHHcCHHHHHHHHHH
Confidence 7899999999999985555 445678888888888
Q ss_pred HHH--hcCChHHHHHHHHHHHH
Q 046057 1175 VME--QDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1175 am~--qdfSW~~~A~~yielY~ 1194 (1198)
+.. +.|+|+.++++++++|+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 343 ARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHhhcCHHHHHHHHHHhhC
Confidence 743 58999999999999984
No 46
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=9e-31 Score=309.37 Aligned_cols=361 Identities=15% Similarity=0.152 Sum_probs=236.1
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCC-CeEEEEeeCCCCCcccccccccccccccCC---CceeEEeece
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLN-HNVDIILPKYDCLKFSDVKDLGYNRSYHWG---GTEIKVWFGK 783 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~G-H~V~VItP~y~~~~~~~~~~l~~~~~~~~g---~~~i~V~~~~ 783 (1198)
++|||++|+..|.|+ ++|....+..++..|+++| |+|+||.|.+...+...++. ....|... ...++.|
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~--~~~~f~~~~~~e~~~~~~--- 75 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYP--NKITFSSPSEQEAYVRQW--- 75 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCcccccccccc--ccccccCchhhhhhhhhh---
Confidence 469999999999996 8999999999999999999 89999999876322111100 00001000 0011111
Q ss_pred ecCeEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCCh-hHH--HHHHHHhhhhcCCCC
Q 046057 784 VEGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSS-APV--AWLFKDHYVHYGLSK 860 (1198)
Q Consensus 784 ~~Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~t-a~v--a~llk~~y~~~gl~~ 860 (1198)
.+-.++++....-.+-++ .|+. ..|+.+....+.+.+.. ++|||||+|+... +++ +...... .
T Consensus 76 -~~~~v~r~~s~~~p~yp~-r~~~---~~r~~~~~~~i~~~l~~--~~pDVIHv~tP~~LG~~~~g~~~~~k-------~ 141 (462)
T PLN02846 76 -LEERISFLPKFSIKFYPG-KFST---DKRSILPVGDISETIPD--EEADIAVLEEPEHLTWYHHGKRWKTK-------F 141 (462)
T ss_pred -ccCeEEEecccccccCcc-cccc---cccccCChHHHHHHHHh--cCCCEEEEcCchhhhhHHHHHHHHhc-------C
Confidence 111222222110000000 0000 01223334556666665 5899999997422 222 1111111 1
Q ss_pred CeEEEEecCCchh----------hh----HHHHHH--hccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCC
Q 046057 861 ARIVFTIHNLEFG----------TH----HIGKAM--TYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWD 924 (1198)
Q Consensus 861 ipvV~tIHn~~~~----------~~----li~~~~--~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~ 924 (1198)
.++|.++|+.... .. .+...+ .++|.++++|....+ +.. .....++|||.+.|.
T Consensus 142 ~~vV~tyHT~y~~Y~~~~~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~---------~~i~~v~GVd~~~f~ 211 (462)
T PLN02846 142 RLVIGIVHTNYLEYVKREKNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPR---------SIICNVHGVNPKFLE 211 (462)
T ss_pred CcEEEEECCChHHHHHHhccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-Hhh---------CEEecCceechhhcC
Confidence 3488899995421 11 112233 368999999985554 531 233446899999887
Q ss_pred CCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCC--CcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecC
Q 046057 925 PFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSD--LPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSA 1000 (1198)
Q Consensus 925 P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d--~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsg 1000 (1198)
|.. . .+++..+ + .+ .++++|+|||.++||++.+++|+..+.+ ++++|+|+|+|
T Consensus 212 ~~~-----------------~----~~~~~~~-~-~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdG 268 (462)
T PLN02846 212 IGK-----------------L----KLEQQKN-G-EQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSG 268 (462)
T ss_pred CCc-----------------c----cHhhhcC-C-CCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCC
Confidence 631 0 0112222 2 23 3579999999999999999999998864 47999999999
Q ss_pred CChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccc
Q 046057 1001 PDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTV 1080 (1198)
Q Consensus 1001 pdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V 1080 (1198)
|+ ++.|++++.++++. ++++.++.... .+|+.+|+||+||..|+||++++|||+||+|||+++.++ .+++
T Consensus 269 p~---~~~L~~~a~~l~l~----~~vf~G~~~~~--~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v 338 (462)
T PLN02846 269 ED---SDEVKAAAEKLELD----VRVYPGRDHAD--PLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFF 338 (462)
T ss_pred cc---HHHHHHHHHhcCCc----EEEECCCCCHH--HHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-ccee
Confidence 85 67899999988873 33345554433 699999999999999999999999999999999999998 5999
Q ss_pred cccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHH
Q 046057 1081 FDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISA 1160 (1198)
Q Consensus 1081 ~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~ 1160 (1198)
.++ .||+++ .|+++++.+|. .++.
T Consensus 339 ~~~-------------~ng~~~--~~~~~~a~ai~----------------------------------------~~l~- 362 (462)
T PLN02846 339 KQF-------------PNCRTY--DDGKGFVRATL----------------------------------------KALA- 362 (462)
T ss_pred ecC-------------CceEec--CCHHHHHHHHH----------------------------------------HHHc-
Confidence 887 899998 47889997777 4442
Q ss_pred HhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 046057 1161 YYDGREWLNSLCKTVMEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1161 l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~ 1194 (1198)
++++. +..+ ..+.|||+.++++|+++|+
T Consensus 363 --~~~~~---~~~~-a~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 363 --EEPAP---LTDA-QRHELSWEAATERFLRVAD 390 (462)
T ss_pred --cCchh---HHHH-HHHhCCHHHHHHHHHHHhc
Confidence 23322 2222 2358999999999999996
No 47
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=2e-30 Score=289.74 Aligned_cols=339 Identities=16% Similarity=0.165 Sum_probs=250.9
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||+||+..+.| |.+.++..++++|.++||+|.|+++......... ... . ..+..+.
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~-~~~----------~--------~~~~~~~ 56 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVH-PED----------R--------AELARTR 56 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCccccccc-ccc----------c--------ccccchH
Confidence 69999988754 4789999999999999999999997533211000 000 0 0000000
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
.+ .....+..+...+...+.+ .+|||||+|.+........+.... .++|+++++|+.
T Consensus 57 ~~----------------~~~~~~~~~~~~~~~~~~~--~~~Dii~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 113 (355)
T cd03799 57 YL----------------ARSLALLAQALVLARELRR--LGIDHIHAHFGTTPATVAMLASRL-----GGIPYSFTAHGK 113 (355)
T ss_pred HH----------------HHHHHHHHHHHHHHHHHHh--cCCCEEEECCCCchHHHHHHHHHh-----cCCCEEEEEecc
Confidence 00 0000111122223333333 489999999875443333333322 268999999965
Q ss_pred chh--h--hHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHH
Q 046057 871 EFG--T--HHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRA 946 (1198)
Q Consensus 871 ~~~--~--~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~ 946 (1198)
... . ..++..+..+|.++++|+..++.+... ++....++.+|+||+|.+.+.+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~--~~~~~~~~~vi~~~~d~~~~~~~~------------------- 172 (355)
T cd03799 114 DIFRSPDAIDLDEKLARADFVVAISEYNRQQLIRL--LGCDPDKIHVVHCGVDLERFPPRP------------------- 172 (355)
T ss_pred cccccCchHHHHHHHhhCCEEEECCHHHHHHHHHh--cCCCcccEEEEeCCcCHHHcCCcc-------------------
Confidence 432 2 267778899999999999999999743 234567899999999988776521
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC--CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcE
Q 046057 947 AKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR--GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRA 1024 (1198)
Q Consensus 947 ~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~--~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV 1024 (1198)
... ..+.+.|+++||+.+.||++.+++|+..+.+. +++|+++|.++. ...+..+++++++ +++|
T Consensus 173 --------~~~-~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~---~~~~~~~~~~~~~--~~~v 238 (355)
T cd03799 173 --------PPP-PGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL---RDELEALIAELGL--EDRV 238 (355)
T ss_pred --------ccc-cCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc---HHHHHHHHHHcCC--CCeE
Confidence 000 13567899999999999999999999998764 799999999853 4678888888876 4789
Q ss_pred EEEccCChHHHHHHHHHccEEEEcCCC------CCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCc
Q 046057 1025 RLCLTYDEPLSHLIYAGADFILVPSIF------EPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPN 1098 (1198)
Q Consensus 1025 ~f~g~~d~~~l~~iyA~ADi~LvPS~~------EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~n 1098 (1198)
.|+|.++.+++..+|+.||++|+||.. |++|++++|||++|+|+|+++.|+.++++.++ .+
T Consensus 239 ~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~-------------~~ 305 (355)
T cd03799 239 TLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDG-------------ET 305 (355)
T ss_pred EECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCC-------------Cc
Confidence 999999988999999999999999999 99999999999999999999999999999886 79
Q ss_pred EEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH---
Q 046057 1099 GFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--- 1175 (1198)
Q Consensus 1099 G~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--- 1175 (1198)
|+++++.|+++++++|. .+.++++.+.++++++
T Consensus 306 g~~~~~~~~~~l~~~i~--------------------------------------------~~~~~~~~~~~~~~~a~~~ 341 (355)
T cd03799 306 GLLVPPGDPEALADAIE--------------------------------------------RLLDDPELRREMGEAGRAR 341 (355)
T ss_pred eEEeCCCCHHHHHHHHH--------------------------------------------HHHhCHHHHHHHHHHHHHH
Confidence 99999999999996666 3345677778888777
Q ss_pred HHhcCChHHHHHH
Q 046057 1176 MEQDWSWNRPALD 1188 (1198)
Q Consensus 1176 m~qdfSW~~~A~~ 1188 (1198)
+.+.|||+..+++
T Consensus 342 ~~~~~s~~~~~~~ 354 (355)
T cd03799 342 VEEEFDIRKQAAR 354 (355)
T ss_pred HHHhcCHHHHhhc
Confidence 4578999998865
No 48
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=3.9e-30 Score=284.84 Aligned_cols=351 Identities=23% Similarity=0.257 Sum_probs=253.4
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+..+.| ..||.+..+..++++|+++||+|+++++........... .+....
T Consensus 1 kil~~~~~~~p--~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLP--QVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV----------------------VVVRPF 56 (374)
T ss_pred CeeEeehhccC--CCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc----------------------cccccc
Confidence 69999999888 489999999999999999999999999865432211000 000000
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCC-hhHHHHHHHHhhhhcCCCCCeEEEEecC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWS-SAPVAWLFKDHYVHYGLSKARIVFTIHN 869 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~-ta~va~llk~~y~~~gl~~ipvV~tIHn 869 (1198)
... . ....+. ...+. +...+...+.. .+|||||+|... .+..+..++..+ ++|+|+++|+
T Consensus 57 ~~~-~-~~~~~~--------~~~~~-~~~~~~~~~~~--~~~Div~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~ 117 (374)
T cd03817 57 RVP-T-FKYPDF--------RLPLP-IPRALIIILKE--LGPDIVHTHTPFSLGLLGLRVARKL------GIPVVATYHT 117 (374)
T ss_pred ccc-c-chhhhh--------hcccc-HHHHHHHHHhh--cCCCEEEECCchhhhhHHHHHHHHc------CCCEEEEecC
Confidence 000 0 000000 00011 11223333333 589999999743 233333333332 7899999998
Q ss_pred Cchh----------------h-hHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCC
Q 046057 870 LEFG----------------T-HHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIP 932 (1198)
Q Consensus 870 ~~~~----------------~-~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp 932 (1198)
.... . .+.+..+..+|.++++|+...+.+.... ...++.+|+||+|...+.+..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~~----~~~~~~vi~~~~~~~~~~~~~----- 188 (374)
T cd03817 118 MYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLREYG----VKRPIEVIPTGIDLDRFEPVD----- 188 (374)
T ss_pred CHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHhcC----CCCceEEcCCccchhccCccc-----
Confidence 6431 1 2344566889999999999888886432 234689999999988776521
Q ss_pred cccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHH
Q 046057 933 VSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFV 1010 (1198)
Q Consensus 933 ~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~ 1010 (1198)
....++++++. .+.++|+++|++.+.||++.+++|+..+.+ ++++|+++|+++ ..+.+.
T Consensus 189 ---------------~~~~~~~~~~~-~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~---~~~~~~ 249 (374)
T cd03817 189 ---------------GDDERRKLGIP-EDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP---EREELE 249 (374)
T ss_pred ---------------hhHHHHhcCCC-CCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc---hHHHHH
Confidence 11124556665 467899999999999999999999999875 579999999885 356788
Q ss_pred HHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhh
Q 046057 1011 NLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERA 1090 (1198)
Q Consensus 1011 ~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~ 1090 (1198)
++++++++ .++|.|++.++...+..+|+.||++++||..|++|++++|||+||+|+|+++.|+..+++.++
T Consensus 250 ~~~~~~~~--~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~------- 320 (374)
T cd03817 250 ELARELGL--ADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADG------- 320 (374)
T ss_pred HHHHHcCC--CCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecC-------
Confidence 88888876 478999999999899999999999999999999999999999999999999999999999987
Q ss_pred hccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHH
Q 046057 1091 QALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNS 1170 (1198)
Q Consensus 1091 ~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~ 1170 (1198)
.+|+++++.+. +++++|. .+.++++.++.
T Consensus 321 ------~~g~~~~~~~~-~~~~~i~--------------------------------------------~l~~~~~~~~~ 349 (374)
T cd03817 321 ------ENGFLFPPGDE-ALAEALL--------------------------------------------RLLQDPELRRR 349 (374)
T ss_pred ------ceeEEeCCCCH-HHHHHHH--------------------------------------------HHHhChHHHHH
Confidence 78999998887 6774444 45567777777
Q ss_pred HHHHHH--HhcCChHHHHHHHHHHHHH
Q 046057 1171 LCKTVM--EQDWSWNRPALDYMELYRA 1195 (1198)
Q Consensus 1171 L~~~am--~qdfSW~~~A~~yielY~~ 1195 (1198)
+++++. .+++. .+.++.++|++
T Consensus 350 ~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 350 LSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 777772 23333 66777778765
No 49
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=3.6e-30 Score=285.26 Aligned_cols=365 Identities=19% Similarity=0.150 Sum_probs=258.6
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+..+.|. .||.+.++..|+++|+++||+|+++++............ .......++.++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG---------------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc---------------ceEEecCCeEEE
Confidence 699999988884 499999999999999999999999997533211100000 001123455555
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCCh--hHHHHHHHHhhhhcCCCCCeEEEEec
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSS--APVAWLFKDHYVHYGLSKARIVFTIH 868 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~t--a~va~llk~~y~~~gl~~ipvV~tIH 868 (1198)
.+..... .....+ ....++..|.......+.....+||+||+|.+.. ...+..++.. .++|+|+++|
T Consensus 64 ~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~------~~~~~i~~~h 132 (394)
T cd03794 64 RVPLPPY--KKNGLL---KRLLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARL------KGAPFVLEVR 132 (394)
T ss_pred EEecCCC--CccchH---HHHHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHh------cCCCEEEEeh
Confidence 4432210 000000 0011222333333333332346899999997322 2222222222 2789999999
Q ss_pred CCchh------------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCC
Q 046057 869 NLEFG------------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKF 930 (1198)
Q Consensus 869 n~~~~------------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~ 930 (1198)
+.... ..+.+..+..+|.++++|+...+.+.. ......++.+|+||+|...+.+....
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~- 208 (394)
T cd03794 133 DLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREYLVR---RGVPPEKISVIPNGVDLELFKPPPAD- 208 (394)
T ss_pred hhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHh---cCCCcCceEEcCCCCCHHHcCCccch-
Confidence 86421 123345678899999999999998862 23345689999999998876653210
Q ss_pred CCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC-CcEEEEEecCCChhhHHHH
Q 046057 931 IPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR-GGQVVLLGSAPDPRIQNDF 1009 (1198)
Q Consensus 931 Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~-~~qLVIvGsgpdp~i~~~L 1009 (1198)
. . +.++... .+.++|+++|++.+.||++.+++|+..+.+. +++|+++|.++. ...+
T Consensus 209 ---------------~---~-~~~~~~~-~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~~---~~~~ 265 (394)
T cd03794 209 ---------------E---S-LRKELGL-DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGPE---KEEL 265 (394)
T ss_pred ---------------h---h-hhhccCC-CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCccc---HHHH
Confidence 0 0 2233332 3678999999999999999999999998765 899999998853 4556
Q ss_pred HHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCC-----cHHHHHHHHhCCcEEEeCCccccccccccc
Q 046057 1010 VNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPC-----GLTQLVAMRYGSIPVVRKTGGLYDTVFDVD 1084 (1198)
Q Consensus 1010 ~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~Epf-----GLt~LEAMa~G~PvIvt~tGGl~E~V~d~d 1084 (1198)
.+++...++ +++.+++.++.+.+..+|+.||++++||..|++ +++++|||++|+|+|+++.||..+.+.++
T Consensus 266 ~~~~~~~~~---~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~- 341 (394)
T cd03794 266 KELAKALGL---DNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEA- 341 (394)
T ss_pred HHHHHHcCC---CcEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccC-
Confidence 665555554 679999988989999999999999999999876 77899999999999999999999999876
Q ss_pred cchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcC
Q 046057 1085 HDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDG 1164 (1198)
Q Consensus 1085 ~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~ 1164 (1198)
.+|+++++.|+++++++|. .+..+
T Consensus 342 ------------~~g~~~~~~~~~~l~~~i~--------------------------------------------~~~~~ 365 (394)
T cd03794 342 ------------GAGLVVPPGDPEALAAAIL--------------------------------------------ELLDD 365 (394)
T ss_pred ------------CcceEeCCCCHHHHHHHHH--------------------------------------------HHHhC
Confidence 7899999999999996666 33367
Q ss_pred HHHHHHHHHHH---HHhcCChHHHHHHHH
Q 046057 1165 REWLNSLCKTV---MEQDWSWNRPALDYM 1190 (1198)
Q Consensus 1165 ~e~~~~L~~~a---m~qdfSW~~~A~~yi 1190 (1198)
++.+.++.+++ ..+.|||+.++++|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 366 PEERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred hHHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 77778887777 345899999998874
No 50
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=7.7e-31 Score=291.97 Aligned_cols=347 Identities=19% Similarity=0.185 Sum_probs=250.4
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++++..+.|. ..||.++++..|+++|++.||+|+++++.............. ...
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~---------------------~~~- 57 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAA---------------------LRL- 57 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhc---------------------ccc-
Confidence 688888777763 589999999999999999999999999874432211100000 000
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
+... ... ....++..+.......+.. .+|||||+|.+..... ...++|+|+++|+.
T Consensus 58 -~~~~-~~~---------~~~~~~~~~~~~~~~~~~~--~~~Dii~~~~~~~~~~-----------~~~~~~~i~~~hd~ 113 (365)
T cd03809 58 -LLRL-PRR---------LLWGLLFLLRAGDRLLLLL--LGLDLLHSPHNTAPLL-----------RLRGVPVVVTIHDL 113 (365)
T ss_pred -cccc-ccc---------cccchhhHHHHHHHHHhhh--cCCCeeeecccccCcc-----------cCCCCCEEEEeccc
Confidence 0000 000 0000111111112222222 5899999998765443 12388999999987
Q ss_pred chh--------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccc
Q 046057 871 EFG--------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYT 936 (1198)
Q Consensus 871 ~~~--------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys 936 (1198)
.+. ..+++..+..+|.++++|+..++.+.. .++....++.+|+||+|...+.+..+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~--~~~~~~~~~~vi~~~~~~~~~~~~~~-------- 183 (365)
T cd03809 114 IPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR--YLGVPPDKIVVIPLGVDPRFRPPPAE-------- 183 (365)
T ss_pred hhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH--HhCcCHHHEEeeccccCccccCCCch--------
Confidence 532 234556778999999999999998864 23334568999999999887655211
Q ss_pred cchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC--CcEEEEEecCCChhhHHHHHHHHH
Q 046057 937 SENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR--GGQVVLLGSAPDPRIQNDFVNLAN 1014 (1198)
Q Consensus 937 ~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~--~~qLVIvGsgpdp~i~~~L~~la~ 1014 (1198)
.. +...... .+.++|+++||+.+.||++.+++|+..+.+. +++|+++|.++.. .. ......+
T Consensus 184 ------------~~-~~~~~~~-~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~-~~-~~~~~~~ 247 (365)
T cd03809 184 ------------AE-VLRALYL-LPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWL-NE-ELLARLR 247 (365)
T ss_pred ------------HH-HHHHhcC-CCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccc-cH-HHHHHHH
Confidence 00 2222222 3678999999999999999999999999865 4899999986432 22 2222224
Q ss_pred HhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccC
Q 046057 1015 ELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALD 1094 (1198)
Q Consensus 1015 eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~ 1094 (1198)
++++ .++|.++|.++.+++..+|+.||++++||.+|++|++++|||++|+|||+++.|++.|++.+
T Consensus 248 ~~~~--~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~------------ 313 (365)
T cd03809 248 ELGL--GDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD------------ 313 (365)
T ss_pred HcCC--CCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceecC------------
Confidence 5555 58999999999999999999999999999999999999999999999999999999998854
Q ss_pred CCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHH
Q 046057 1095 LEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKT 1174 (1198)
Q Consensus 1095 ~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~ 1174 (1198)
+|+++++.|+++++++|. .+.++++.+..++++
T Consensus 314 ---~~~~~~~~~~~~~~~~i~--------------------------------------------~l~~~~~~~~~~~~~ 346 (365)
T cd03809 314 ---AALYFDPLDPEALAAAIE--------------------------------------------RLLEDPALREELRER 346 (365)
T ss_pred ---ceeeeCCCCHHHHHHHHH--------------------------------------------HHhcCHHHHHHHHHH
Confidence 599999999999996555 445788888888877
Q ss_pred H--HHhcCChHHHHHHHHH
Q 046057 1175 V--MEQDWSWNRPALDYME 1191 (1198)
Q Consensus 1175 a--m~qdfSW~~~A~~yie 1191 (1198)
+ ..+.|+|+..+++|++
T Consensus 347 ~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 347 GLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHhCCHHHHHHHHhC
Confidence 7 4578999999999864
No 51
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.97 E-value=1.9e-29 Score=275.31 Aligned_cols=335 Identities=17% Similarity=0.142 Sum_probs=242.0
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++++..+.| .||.++++..|+++|++.||+|+++++.... . .... ...++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~--~~~~-------------------~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-P--PFYE-------------------LDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-C--Cccc-------------------cCCcccee
Confidence 68999987765 7999999999999999999999999976432 0 0000 01112222
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCC-CeEEEEecC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSK-ARIVFTIHN 869 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~-ipvV~tIHn 869 (1198)
.+...... .......+...+.++++. .+||+||+|.+. ....+..... + +|+|++.|+
T Consensus 56 ~~~~~~~~-----------~~~~~~~~~~~~~~~l~~--~~~d~i~~~~~~--~~~~~~~~~~------~~~~~i~~~~~ 114 (348)
T cd03820 56 DLGDKRDS-----------KLLARFKKLRRLRKLLKN--NKPDVVISFLTS--LLTFLASLGL------KIVKLIVSEHN 114 (348)
T ss_pred eccccccc-----------chhccccchHHHHHhhcc--cCCCEEEEcCch--HHHHHHHHhh------ccccEEEecCC
Confidence 22111000 000011122334445544 589999999876 1122111111 3 599999998
Q ss_pred Cchhhh-------HHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhh
Q 046057 870 LEFGTH-------HIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVE 942 (1198)
Q Consensus 870 ~~~~~~-------li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~ 942 (1198)
...... ..+..+..+|.++++|+...... ......++.+|+||+|...+.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~-----~~~~~~~~~vi~~~~~~~~~~~~---------------- 173 (348)
T cd03820 115 SPDAYKKRLRRLLLRRLLYRRADAVVVLTEEDRALY-----YKKFNKNVVVIPNPLPFPPEEPS---------------- 173 (348)
T ss_pred CccchhhhhHHHHHHHHHHhcCCEEEEeCHHHHHHh-----hccCCCCeEEecCCcChhhcccc----------------
Confidence 764321 25567889999999999987222 12335689999999998765431
Q ss_pred chHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCC
Q 046057 943 GKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSH 1020 (1198)
Q Consensus 943 gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~ 1020 (1198)
...+.++++++|++.+.||++.+++|+..+.+ ++++|+|+|++++ ...+.+++.++++
T Consensus 174 ---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~---~~~~~~~~~~~~~-- 233 (348)
T cd03820 174 ---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPE---REALEALIKELGL-- 233 (348)
T ss_pred ---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCC---HHHHHHHHHHcCC--
Confidence 01356789999999999999999999999873 5799999999854 4567777888877
Q ss_pred CCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcc-ccccccccccchhhhhccCCCCcE
Q 046057 1021 ADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGG-LYDTVFDVDHDKERAQALDLEPNG 1099 (1198)
Q Consensus 1021 ~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGG-l~E~V~d~d~~~~~~~~~~~~~nG 1099 (1198)
.+++.+.+. .+.+..+|+.||++++||.+|++|++++|||++|+|+|+++.++ ..+++.++ .+|
T Consensus 234 ~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~-------------~~g 298 (348)
T cd03820 234 EDRVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDG-------------VNG 298 (348)
T ss_pred CCeEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccC-------------cce
Confidence 478988887 45578999999999999999999999999999999999998754 55666554 689
Q ss_pred EEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HH
Q 046057 1100 FSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--ME 1177 (1198)
Q Consensus 1100 ~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~ 1177 (1198)
+++++.|+++++++|. .+.++++.+.++.+++ +.
T Consensus 299 ~~~~~~~~~~~~~~i~--------------------------------------------~ll~~~~~~~~~~~~~~~~~ 334 (348)
T cd03820 299 LLVPNGDVEALAEALL--------------------------------------------RLMEDEELRKRMGANARESA 334 (348)
T ss_pred EEeCCCCHHHHHHHHH--------------------------------------------HHHcCHHHHHHHHHHHHHHH
Confidence 9999999999996655 4457888888887776 55
Q ss_pred hcCChHHHHHHHHH
Q 046057 1178 QDWSWNRPALDYME 1191 (1198)
Q Consensus 1178 qdfSW~~~A~~yie 1191 (1198)
+.|+|+.++++|.+
T Consensus 335 ~~~~~~~~~~~~~~ 348 (348)
T cd03820 335 ERFSIENIIKQWEE 348 (348)
T ss_pred HHhCHHHHHHHhcC
Confidence 78999999999863
No 52
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.97 E-value=6.9e-30 Score=303.97 Aligned_cols=422 Identities=15% Similarity=0.157 Sum_probs=264.2
Q ss_pred EccccCCCCCCCcHHHHHHHHHHHHHh-CCCeEEEEeeCCCCCccccccccccc--------ccccCCCceeEEeeceec
Q 046057 715 IAVEMAPIAKVGGLGDVVTSLSRTVQD-LNHNVDIILPKYDCLKFSDVKDLGYN--------RSYHWGGTEIKVWFGKVE 785 (1198)
Q Consensus 715 Vs~e~~P~akvGGl~~vV~~LarAL~~-~GH~V~VItP~y~~~~~~~~~~l~~~--------~~~~~g~~~i~V~~~~~~ 785 (1198)
+++|-+. |+||.-+|+..=+..+++ .|-+..+|.|....-....+..+... ....-.|..+++.+..++
T Consensus 7 ~swEV~N--KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~ 84 (590)
T cd03793 7 VAWEVAN--KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIE 84 (590)
T ss_pred Eeehhhc--cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcC
Confidence 5666665 899999999988877764 58899999887442111111111100 111224566778888889
Q ss_pred CeEEEEeCCCCCccc--------------cccc--cCCCCchhhHHHHHHHHHHHHHh--cCCCceEEEECCCChhHHHH
Q 046057 786 GLSVYFLEPQNGFFS--------------KGCV--YGCNNDKERFAFFCHAALEFLLQ--GGFHPDIIHCHDWSSAPVAW 847 (1198)
Q Consensus 786 Gv~v~~l~~~~~~f~--------------rg~i--Yg~~dd~~Rf~~F~~aale~L~~--~~~~PDVIH~Hdw~ta~va~ 847 (1198)
|.+..+|-....+++ .+.+ |+..++..-|++.+...++-+.. ...++||+|+|+|+++..+.
T Consensus 85 G~P~viL~D~~~~~~~~~~~~~~lW~~~~i~s~~~~~d~nea~~fgy~~~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~ 164 (590)
T cd03793 85 GYPKVVLFDIGSAAWKLDEWKGELWELCGIGSPEGDRETNDAIIFGFLVAWFLGEFAEQFDDEPAVVAHFHEWQAGVGLP 164 (590)
T ss_pred CCCeEEEEeCchhhhhHHHHHHHHHHHcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhhccCCCCeEEEEcchhHhHHHH
Confidence 988776654333331 1111 23346677787777655544433 24579999999999999998
Q ss_pred HHHHhhhhcCCCCCeEEEEecCCchhhh-------------------------------HHHHHHhccCEEEEeCHHHHH
Q 046057 848 LFKDHYVHYGLSKARIVFTIHNLEFGTH-------------------------------HIGKAMTYADKATTVSHTYSK 896 (1198)
Q Consensus 848 llk~~y~~~gl~~ipvV~tIHn~~~~~~-------------------------------li~~~~~~AD~VitVS~~~a~ 896 (1198)
.++... ..+|+|+|+|....++. +.+.+...||.+||||+.++.
T Consensus 165 ~lK~~~-----~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~ 239 (590)
T cd03793 165 LLRKRK-----VDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAY 239 (590)
T ss_pred HHHHhC-----CCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHH
Confidence 888532 37899999998776541 233566789999999999999
Q ss_pred HHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCC-CCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEE-EecCCC-
Q 046057 897 EVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKF-IPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGI-ITRLTH- 973 (1198)
Q Consensus 897 el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~-Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~-VGRL~~- 973 (1198)
|+. ..++.+.++ +||||||.+.|.+..+-. +... ..+.+ -...+..++.+++++ ++.++++| +||++.
T Consensus 240 E~~--~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~-~k~ki---~~f~~~~~~~~~~~~-~d~tli~f~~GR~e~~ 310 (590)
T cd03793 240 EAE--HLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQ-SKEKI---NEFVRGHFYGHYDFD-LDKTLYFFTAGRYEFS 310 (590)
T ss_pred HHH--HHhCCCCCE--EeCCCcchhhcccchhhhhhhHH-hhhhh---hHHHHHHHhhhcCCC-CCCeEEEEEeeccccc
Confidence 997 445555555 999999999987632200 0000 00000 011122345667776 46677777 799998
Q ss_pred ccCHHHHHHHHHHhhc---C---Cc---EEEEEecCCC---------hh----hHHHHHHH-------------------
Q 046057 974 QKGIHLIKHAIWRTLD---R---GG---QVVLLGSAPD---------PR----IQNDFVNL------------------- 1012 (1198)
Q Consensus 974 qKGidlIleAl~~ll~---~---~~---qLVIvGsgpd---------p~----i~~~L~~l------------------- 1012 (1198)
+||++.+++|++++.. . +. -|+++=.+.. .. +++.+..+
T Consensus 311 nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~ 390 (590)
T cd03793 311 NKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPD 390 (590)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCC
Confidence 9999999999998853 1 22 2343322100 01 11111111
Q ss_pred --------------------------------------------HHHhCCCC--CC--cEEEEccC---Ch----HHHHH
Q 046057 1013 --------------------------------------------ANELHSSH--AD--RARLCLTY---DE----PLSHL 1037 (1198)
Q Consensus 1013 --------------------------------------------a~eLgl~~--~d--rV~f~g~~---d~----~~l~~ 1037 (1198)
..++++-+ .+ +|.|+..| .. .....
T Consensus 391 ~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E 470 (590)
T cd03793 391 LEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEE 470 (590)
T ss_pred hhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHH
Confidence 11222211 12 34454433 11 12468
Q ss_pred HHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhc
Q 046057 1038 IYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSI 1117 (1198)
Q Consensus 1038 iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~ 1117 (1198)
+|++||++|+||++||||++++|||+||+|+|+|+.+|+.+.+.+.-. .....|+++.+.+..++.+.+++|
T Consensus 471 ~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~--------~~~~~gi~V~~r~~~~~~e~v~~L 542 (590)
T cd03793 471 FVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIE--------DPESYGIYIVDRRFKSPDESVQQL 542 (590)
T ss_pred HhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhc--------cCCCceEEEecCCccchHHHHHHH
Confidence 899999999999999999999999999999999999999555442100 001357788765555555544422
Q ss_pred ccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH----HHhcCChHHHHHHHHHHH
Q 046057 1118 HVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV----MEQDWSWNRPALDYMELY 1193 (1198)
Q Consensus 1118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a----m~qdfSW~~~A~~yielY 1193 (1198)
. .+|..+.+. ..++.+..++ ....|+|++.+..|.+.|
T Consensus 543 a-------------------------------------~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~ 584 (590)
T cd03793 543 T-------------------------------------QYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKAR 584 (590)
T ss_pred H-------------------------------------HHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 1 455554433 3334444443 356799999999999999
Q ss_pred HHHhC
Q 046057 1194 RAARK 1198 (1198)
Q Consensus 1194 ~~a~K 1198 (1198)
+.|++
T Consensus 585 ~~Al~ 589 (590)
T cd03793 585 QLALS 589 (590)
T ss_pred HHHhh
Confidence 98864
No 53
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.97 E-value=1.2e-29 Score=301.76 Aligned_cols=286 Identities=13% Similarity=0.121 Sum_probs=210.5
Q ss_pred HHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEE-EecCCch--hhhHHH---HHH-------hccC
Q 046057 819 HAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVF-TIHNLEF--GTHHIG---KAM-------TYAD 885 (1198)
Q Consensus 819 ~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~-tIHn~~~--~~~li~---~~~-------~~AD 885 (1198)
..+..++++ .+|||||+|+..+...+.+.+... ++|+++ +.|.... ..+.+. ..+ ..+|
T Consensus 270 ~~l~~~ir~--~rpDIVHt~~~~a~l~g~laA~la------gvpviv~~~h~~~~~~~~r~~~~e~~~~~~a~~i~~~sd 341 (578)
T PRK15490 270 KHLVPHLCE--RKLDYLSVWQDGACLMIALAALIA------GVPRIQLGLRGLPPVVRKRLFKPEYEPLYQALAVVPGVD 341 (578)
T ss_pred HHHHHHHHH--cCCCEEEEcCcccHHHHHHHHHhc------CCCEEEEeecccCCcchhhHHHHHHHHhhhhceeEecch
Confidence 345555655 589999999877666666555432 788855 4665221 122111 112 2334
Q ss_pred EEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHH--HhCCCCCCCc
Q 046057 886 KATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQ--KVGLRKSDLP 963 (1198)
Q Consensus 886 ~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq--~lGL~~~d~p 963 (1198)
++++|...++.+.. .++.+..|+.+||||||.+.|.|..+. ....++ ..+++ ++.+
T Consensus 342 -~v~~s~~v~~~l~~--~lgip~~KI~VIyNGVD~~rf~p~~~~------------------~~~~r~~~~~~l~-~~~~ 399 (578)
T PRK15490 342 -FMSNNHCVTRHYAD--WLKLEAKHFQVVYNGVLPPSTEPSSEV------------------PHKIWQQFTQKTQ-DADT 399 (578)
T ss_pred -hhhccHHHHHHHHH--HhCCCHHHEEEEeCCcchhhcCccchh------------------hHHHHHHhhhccC-CCCc
Confidence 66778887777752 234567899999999999888763210 011222 23343 3567
Q ss_pred EEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHH
Q 046057 964 LVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAG 1041 (1198)
Q Consensus 964 lIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ 1041 (1198)
+|+++||+.++||+..+++|+..+.+ ++++|+|+|+|+ ..+.++++++++++. ++|+|+|..+ .+..+|+.
T Consensus 400 vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~---~~eeLk~la~elgL~--d~V~FlG~~~--Dv~~~Laa 472 (578)
T PRK15490 400 TIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD---LRAEAQKRAEQLGIL--ERILFVGASR--DVGYWLQK 472 (578)
T ss_pred EEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch---hHHHHHHHHHHcCCC--CcEEECCChh--hHHHHHHh
Confidence 99999999999999999999988764 479999999985 357899999999984 7899998743 46789999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhccccc
Q 046057 1042 ADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSS 1121 (1198)
Q Consensus 1042 ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~ 1121 (1198)
+|++|+||.+|+||++++|||+||+|||++++||.+|+|.++ .+|++|++.|+.++++++..+
T Consensus 473 ADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG-------------~nG~LVp~~D~~aLa~ai~lA---- 535 (578)
T PRK15490 473 MNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEG-------------VSGFILDDAQTVNLDQACRYA---- 535 (578)
T ss_pred CCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccC-------------CcEEEECCCChhhHHHHHHHH----
Confidence 999999999999999999999999999999999999999987 899999999999998776500
Q ss_pred ccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHHHHHHHH
Q 046057 1122 FHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV---MEQDWSWNRPALDYMELYRA 1195 (1198)
Q Consensus 1122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~yielY~~ 1195 (1198)
.++..+..+ ...+++++ +++.|||+.++++|.++|..
T Consensus 536 ----------------------------------~aL~~ll~~---~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 536 ----------------------------------EKLVNLWRS---RTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred ----------------------------------HHHHHHHHH---HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 222222222 23344444 56789999999999999975
No 54
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.97 E-value=7.5e-29 Score=272.40 Aligned_cols=363 Identities=26% Similarity=0.324 Sum_probs=259.7
Q ss_pred EEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEE
Q 046057 712 IVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYF 791 (1198)
Q Consensus 712 IL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~ 791 (1198)
|++|+..+.|. ..||.+.++..++.+|.+.||+|+++++............. .. ........
T Consensus 1 iLii~~~~p~~-~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~----------~~-------~~~~~~~~ 62 (377)
T cd03798 1 ILVISSLYPPP-NNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKG----------RL-------VGVERLPV 62 (377)
T ss_pred CeEeccCCCCC-CCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhccc----------cc-------cccccccc
Confidence 57777766552 36999999999999999999999999975332211100000 00 00000000
Q ss_pred eCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCCh-hHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 792 LEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSS-APVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 792 l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~t-a~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
.... ........++..+...+..++.....+||+||+|.... ..+...+... .++|+++++|+.
T Consensus 63 ~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~------~~~~~i~~~h~~ 127 (377)
T cd03798 63 LLPV---------VPLLKGPLLYLLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRK------LGIPLVVTLHGS 127 (377)
T ss_pred Ccch---------hhccccchhHHHHHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHh------cCCCEEEEeecc
Confidence 0000 00001112233445556666662346999999995433 3333333332 268999999987
Q ss_pred chh--------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhh
Q 046057 871 EFG--------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVE 942 (1198)
Q Consensus 871 ~~~--------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~ 942 (1198)
... ....+..+..+|.++++|+...+.+.... ....++.+|+||+|.+.+.+....
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~------------- 191 (377)
T cd03798 128 DVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKALG---IDPEKVTVIPNGVDTERFSPADRA------------- 191 (377)
T ss_pred hhcccCchhhHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---CCCCceEEcCCCcCcccCCCcchH-------------
Confidence 653 34556778899999999999999887432 345689999999999887653110
Q ss_pred chHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC--CcEEEEEecCCChhhHHHHHHHHHHhCCCC
Q 046057 943 GKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR--GGQVVLLGSAPDPRIQNDFVNLANELHSSH 1020 (1198)
Q Consensus 943 gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~--~~qLVIvGsgpdp~i~~~L~~la~eLgl~~ 1020 (1198)
+. .+++.. .+.++++++|++.+.||++.+++|+..+.+. +++|+++|.+++ ...+.++++++++
T Consensus 192 -----~~---~~~~~~-~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~---~~~~~~~~~~~~~-- 257 (377)
T cd03798 192 -----EA---RKLGLP-EDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL---REALEALAAELGL-- 257 (377)
T ss_pred -----HH---HhccCC-CCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc---hHHHHHHHHhcCC--
Confidence 00 333333 3668999999999999999999999998753 799999998753 4567777777776
Q ss_pred CCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEE
Q 046057 1021 ADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGF 1100 (1198)
Q Consensus 1021 ~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~ 1100 (1198)
.++|.++|.++.+++..+|+.||++++||..|++|++++|||++|+|+|+++.|+..+.+.++ .+|+
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~-------------~~g~ 324 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDG-------------ENGL 324 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCC-------------ccee
Confidence 478999999999999999999999999999999999999999999999999999999999887 7799
Q ss_pred EEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHH---HHH
Q 046057 1101 SFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKT---VME 1177 (1198)
Q Consensus 1101 lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~---am~ 1177 (1198)
++++.|+++++++|. .++ ++++. ++..+ ...
T Consensus 325 ~~~~~~~~~l~~~i~----------------------------------------~~~----~~~~~--~~~~~~~~~~~ 358 (377)
T cd03798 325 LVPPGDPEALAEAIL----------------------------------------RLL----ADPWL--RLGRAARRRVA 358 (377)
T ss_pred EECCCCHHHHHHHHH----------------------------------------HHh----cCcHH--HHhHHHHHHHH
Confidence 999999999997776 333 33432 22222 256
Q ss_pred hcCChHHHHHHHHHHHHHH
Q 046057 1178 QDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1178 qdfSW~~~A~~yielY~~a 1196 (1198)
+.|+|+..+++|.++|+++
T Consensus 359 ~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 359 ERFSWENVAERLLELYREV 377 (377)
T ss_pred HHhhHHHHHHHHHHHHhhC
Confidence 7899999999999999864
No 55
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.97 E-value=8.6e-29 Score=271.35 Aligned_cols=342 Identities=19% Similarity=0.187 Sum_probs=247.1
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|+.. .||.+.++..|+++|.+.||+|.++++...... .....|+.++
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEE
Confidence 68888864 589999999999999999999999996532210 0112344444
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
.++...... ...+.......+..++.+ .+|||||+|.+.+..++.+.+... ...++++++|+.
T Consensus 52 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~--~~~dvv~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~ 114 (359)
T cd03808 52 PIPLDRRGI----------NPFKDLKALLRLYRLLRK--ERPDIVHTHTPKPGILGRLAARLA-----GVPKVIYTVHGL 114 (359)
T ss_pred ecccccccc----------ChHhHHHHHHHHHHHHHh--cCCCEEEEccccchhHHHHHHHHc-----CCCCEEEEecCc
Confidence 443221000 000111122234444444 489999999877666665554422 267889999987
Q ss_pred chh-----------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccch
Q 046057 871 EFG-----------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSEN 939 (1198)
Q Consensus 871 ~~~-----------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~ 939 (1198)
.+. ..+.+..+..+|.++++|+...+.+....... ...++.+++||+|.+.+.+....
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------- 183 (359)
T cd03808 115 GFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKLGIIK-KKKTVLIPGSGVDLDRFSPSPEP---------- 183 (359)
T ss_pred chhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHhcCCC-cCceEEecCCCCChhhcCccccc----------
Confidence 543 11234566789999999999999887533221 24578888999998776542110
Q ss_pred hhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhC
Q 046057 940 LVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELH 1017 (1198)
Q Consensus 940 ~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLg 1017 (1198)
. ..+.+.|+++||+.+.||++.+++|+..+.+ .+++|+++|.++........ ++.+++
T Consensus 184 -----------------~-~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~--~~~~~~ 243 (359)
T cd03808 184 -----------------I-PEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAIL--EIEKLG 243 (359)
T ss_pred -----------------c-CCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHH--HHHhcC
Confidence 0 1356799999999999999999999999874 57999999998543221111 244555
Q ss_pred CCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCC
Q 046057 1018 SSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEP 1097 (1198)
Q Consensus 1018 l~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~ 1097 (1198)
. .++|.|+|.. +.+..+|+.||++++||.+|++|++++|||++|+|+|+++.+|..+++.++ .
T Consensus 244 ~--~~~v~~~g~~--~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~-------------~ 306 (359)
T cd03808 244 L--EGRVEFLGFR--DDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDG-------------V 306 (359)
T ss_pred C--cceEEEeecc--ccHHHHHHhccEEEecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcC-------------c
Confidence 4 4789998873 347899999999999999999999999999999999999999999999876 7
Q ss_pred cEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--
Q 046057 1098 NGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV-- 1175 (1198)
Q Consensus 1098 nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a-- 1175 (1198)
+|+++++.|+++++++|. .+..+++.+.++.+++
T Consensus 307 ~g~~~~~~~~~~~~~~i~--------------------------------------------~l~~~~~~~~~~~~~~~~ 342 (359)
T cd03808 307 NGFLVPPGDAEALADAIE--------------------------------------------RLIEDPELRARMGQAARK 342 (359)
T ss_pred ceEEECCCCHHHHHHHHH--------------------------------------------HHHhCHHHHHHHHHHHHH
Confidence 899999999999996665 3456777777777777
Q ss_pred -HHhcCChHHHHHHHH
Q 046057 1176 -MEQDWSWNRPALDYM 1190 (1198)
Q Consensus 1176 -m~qdfSW~~~A~~yi 1190 (1198)
..+.|||+.++.+|+
T Consensus 343 ~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 343 RAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHhcCHHHHHHHhh
Confidence 467899999999886
No 56
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.97 E-value=5.8e-30 Score=305.19 Aligned_cols=274 Identities=20% Similarity=0.194 Sum_probs=218.0
Q ss_pred CCCceEEEECCCC-hhHHHHHHHHhhhhcCCCCCeEEEEecCCchhh------------------------hHHHHHHhc
Q 046057 829 GFHPDIIHCHDWS-SAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGT------------------------HHIGKAMTY 883 (1198)
Q Consensus 829 ~~~PDVIH~Hdw~-ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~------------------------~li~~~~~~ 883 (1198)
..++||||+|... .++++.+++..+ ++|+|+|.|+..... .+.+..+..
T Consensus 171 ~~~~dviH~~s~~~~g~~~~~~~~~~------~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 244 (475)
T cd03813 171 LPKADVYHAVSTGYAGLLGALAKARR------GTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQA 244 (475)
T ss_pred CCCCCEEeccCcchHHHHHHHHHHHh------CCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHh
Confidence 3478999999643 445555555544 899999999964310 112345578
Q ss_pred cCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCc
Q 046057 884 ADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLP 963 (1198)
Q Consensus 884 AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~p 963 (1198)
||.++++|+...+.+.. ++....|+.+||||||.+.|.|.... .. ..+.+
T Consensus 245 ad~Ii~~s~~~~~~~~~---~g~~~~ki~vIpNgid~~~f~~~~~~--------------------------~~-~~~~~ 294 (475)
T cd03813 245 ADRITTLYEGNRERQIE---DGADPEKIRVIPNGIDPERFAPARRA--------------------------RP-EKEPP 294 (475)
T ss_pred CCEEEecCHHHHHHHHH---cCCCHHHeEEeCCCcCHHHcCCcccc--------------------------cc-CCCCc
Confidence 99999999998876653 33456789999999999887763110 01 13678
Q ss_pred EEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCC-ChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH
Q 046057 964 LVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAP-DPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA 1040 (1198)
Q Consensus 964 lIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgp-dp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA 1040 (1198)
+|+++||+.+.||++.+++|+..+.+ ++++|+|+|+++ ++.+.+.++++++++++ .++|+|+| ...+..+|+
T Consensus 295 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l--~~~V~f~G---~~~v~~~l~ 369 (475)
T cd03813 295 VVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGL--EDNVKFTG---FQNVKEYLP 369 (475)
T ss_pred EEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCC--CCeEEEcC---CccHHHHHH
Confidence 99999999999999999999998875 479999999884 45677889999999998 48999998 334688999
Q ss_pred HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccc
Q 046057 1041 GADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVS 1120 (1198)
Q Consensus 1041 ~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~ 1120 (1198)
.+|++|+||..|+||++++|||+||+|||+|++||++|++.+.+.+ ....+|+++++.|+++++++|.
T Consensus 370 ~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~-------~~g~~G~lv~~~d~~~la~ai~----- 437 (475)
T cd03813 370 KLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDE-------ALGPAGEVVPPADPEALARAIL----- 437 (475)
T ss_pred hCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCccc-------ccCCceEEECCCCHHHHHHHHH-----
Confidence 9999999999999999999999999999999999999999884211 1126899999999999996555
Q ss_pred cccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHHHHHHH
Q 046057 1121 SFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV---MEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~yielY~ 1194 (1198)
.+.++++.+.++++++ +.+.|+|+.++++|.++|+
T Consensus 438 ---------------------------------------~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 438 ---------------------------------------RLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ---------------------------------------HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 4457888888888887 5678999999999999994
No 57
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.97 E-value=1.9e-30 Score=288.21 Aligned_cols=356 Identities=21% Similarity=0.238 Sum_probs=267.1
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
++|++|+..++| ..||.+..+..|+..|-+.||.|.+++..|+... .+ +..-.|+.|
T Consensus 1 ~~i~mVsdff~P--~~ggveshiy~lSq~li~lghkVvvithayg~r~------------------gi---rylt~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYP--STGGVESHIYALSQCLIRLGHKVVVITHAYGNRV------------------GI---RYLTNGLKV 57 (426)
T ss_pred CcceeeCccccc--CCCChhhhHHHhhcchhhcCCeEEEEeccccCcc------------------ce---eeecCCceE
Confidence 579999999999 5899999999999999999999999998877521 11 112245777
Q ss_pred EEeCCCCCcccc---ccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEE
Q 046057 790 YFLEPQNGFFSK---GCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFT 866 (1198)
Q Consensus 790 ~~l~~~~~~f~r---g~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~t 866 (1198)
|.++-.- .+.. ..+|+. |-++ ...+.+ .+..|||.|...+.+. .+...+.+..+.++|||
T Consensus 58 yylp~~v-~~n~tT~ptv~~~------~Pll----r~i~lr--E~I~ivhghs~fS~la----he~l~hartMGlktVfT 120 (426)
T KOG1111|consen 58 YYLPAVV-GYNQTTFPTVFSD------FPLL----RPILLR--ERIEIVHGHSPFSYLA----HEALMHARTMGLKTVFT 120 (426)
T ss_pred EEEeeee-eecccchhhhhcc------Cccc----chhhhh--hceEEEecCChHHHHH----HHHHHHHHhcCceEEEe
Confidence 7766321 1110 011111 1111 111222 3788999997544332 22222233457899999
Q ss_pred ecCCchhh--------hHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccc
Q 046057 867 IHNLEFGT--------HHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSE 938 (1198)
Q Consensus 867 IHn~~~~~--------~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~ 938 (1198)
-|.+.-.+ .++...+...|.++|||.+..+...-.+. .++.|+.+|||.++...|.|....
T Consensus 121 dHSlfGfad~~si~~n~ll~~sL~~id~~IcVshtskentvlr~~--L~p~kvsvIPnAv~~~~f~P~~~~--------- 189 (426)
T KOG1111|consen 121 DHSLFGFADIGSILTNKLLPLSLANIDRIICVSHTSKENTVLRGA--LAPAKVSVIPNAVVTHTFTPDAAD--------- 189 (426)
T ss_pred ccccccccchhhhhhcceeeeeecCCCcEEEEeecCCCceEEEec--cCHhHeeeccceeeccccccCccc---------
Confidence 99965332 13334557789999999987765432233 345799999999999999983210
Q ss_pred hhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHh
Q 046057 939 NLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANEL 1016 (1198)
Q Consensus 939 ~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eL 1016 (1198)
.+..+...++.++||...||+|+++++++.+.+ ++++|+|+|+||. +.+|+++.+++
T Consensus 190 ------------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk---~i~lee~lEk~ 248 (426)
T KOG1111|consen 190 ------------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPK---RIDLEEMLEKL 248 (426)
T ss_pred ------------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcc---cchHHHHHHHh
Confidence 011244679999999999999999999999986 5899999999984 56788889988
Q ss_pred CCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCC
Q 046057 1017 HSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLE 1096 (1198)
Q Consensus 1017 gl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~ 1096 (1198)
.++ ++|.++|.++.+.+..+|...|+||.||..|.||++++|||+||+++|++.+||++|++.+.
T Consensus 249 ~l~--~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d------------- 313 (426)
T KOG1111|consen 249 FLQ--DRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED------------- 313 (426)
T ss_pred hcc--CceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-------------
Confidence 885 89999999999999999999999999999999999999999999999999999999999652
Q ss_pred CcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHH
Q 046057 1097 PNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVM 1176 (1198)
Q Consensus 1097 ~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am 1176 (1198)
-......+++++..++. .||..+...|..+.. .+
T Consensus 314 --~i~~~~~~~~dl~~~v~----------------------------------------~ai~~~~~~p~~~h~----~v 347 (426)
T KOG1111|consen 314 --MITLGEPGPDDLVGAVE----------------------------------------KAITKLRTLPLEFHD----RV 347 (426)
T ss_pred --ceeccCCChHHHHHHHH----------------------------------------HHHHHhccCchhHHH----HH
Confidence 23456678899999998 888888777654333 34
Q ss_pred HhcCChHHHHHHHHHHHHHHhC
Q 046057 1177 EQDWSWNRPALDYMELYRAARK 1198 (1198)
Q Consensus 1177 ~qdfSW~~~A~~yielY~~a~K 1198 (1198)
++-|+|..+|++-+.+|.++.+
T Consensus 348 ~~~y~w~dVa~rTekvy~r~~~ 369 (426)
T KOG1111|consen 348 KKMYSWKDVAERTEKVYDRAAT 369 (426)
T ss_pred HHhccHHHHHHHHHHHHHHHhh
Confidence 5679999999999999998753
No 58
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.97 E-value=4.2e-28 Score=264.70 Aligned_cols=313 Identities=21% Similarity=0.216 Sum_probs=228.4
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++++..+. .||.++++..|+++|.+.||+|.+++............. . .. .....
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~---------~---~~-------~~~~~ 57 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPS---------N---VK-------LIPVR 57 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCcccccccc---------c---hh-------hhcee
Confidence 6888887664 699999999999999999999999997633211100000 0 00 00000
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCC-ChhHHHHHHHHhhhhcCCCCCeEEEEecC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDW-SSAPVAWLFKDHYVHYGLSKARIVFTIHN 869 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw-~ta~va~llk~~y~~~gl~~ipvV~tIHn 869 (1198)
..... . .....+...+..+++. .+||+||+|.. .+.++..+... + ++|+|+++|+
T Consensus 58 ~~~~~--~-------------~~~~~~~~~~~~~~~~--~~~dii~~~~~~~~~~~~~~~~~------~-~~~~i~~~~~ 113 (353)
T cd03811 58 VLKLK--S-------------LRDLLAILRLRRLLRK--EKPDVVISHLTTTPNVLALLAAR------L-GTKLIVWEHN 113 (353)
T ss_pred eeecc--c-------------ccchhHHHHHHHHHHh--cCCCEEEEcCccchhHHHHHHhh------c-CCceEEEEcC
Confidence 00000 0 0011223344555554 48999999987 44444433221 1 6899999999
Q ss_pred Cchhhh--------HHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhh
Q 046057 870 LEFGTH--------HIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLV 941 (1198)
Q Consensus 870 ~~~~~~--------li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~ 941 (1198)
...... .....+..+|.++++|+...+.+... +.....++.+|+||+|.+.+.+....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--~~~~~~~~~vi~~~~~~~~~~~~~~~------------ 179 (353)
T cd03811 114 SLSLELKRKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL--LGIPPDKIEVIYNPIDIEEIRALAEE------------ 179 (353)
T ss_pred cchhhhccchhHHHHHHhhccccceEEEeccchhhhHHHh--hcCCccccEEecCCcChhhcCcccch------------
Confidence 875421 35667789999999999999888642 22235689999999998877652110
Q ss_pred hchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC--CcEEEEEecCCChhhHHHHHHHHHHhCCC
Q 046057 942 EGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR--GGQVVLLGSAPDPRIQNDFVNLANELHSS 1019 (1198)
Q Consensus 942 ~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~--~~qLVIvGsgpdp~i~~~L~~la~eLgl~ 1019 (1198)
+ . .++.. .+.++|+++||+.+.||++.+++|+..+.+. +++|+++|.++. ...+.++++++++
T Consensus 180 ------~-~---~~~~~-~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~---~~~~~~~~~~~~~- 244 (353)
T cd03811 180 ------P-L---ELGIP-PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPL---REELEALAKELGL- 244 (353)
T ss_pred ------h-h---hcCCC-CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCcc---HHHHHHHHHhcCC-
Confidence 0 0 22333 4678999999999999999999999999764 799999998753 4667788888887
Q ss_pred CCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcE
Q 046057 1020 HADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNG 1099 (1198)
Q Consensus 1020 ~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG 1099 (1198)
.++|.+.+..++ +..+|+.||++|+||.+|++|++++|||++|+|+|+++.||+.|++.++ .+|
T Consensus 245 -~~~v~~~g~~~~--~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~-------------~~g 308 (353)
T cd03811 245 -ADRVHFLGFQSN--PYPYLKAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDG-------------ENG 308 (353)
T ss_pred -CccEEEecccCC--HHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCC-------------Cce
Confidence 478999888654 6789999999999999999999999999999999999999999999987 899
Q ss_pred EEEcCCCHHHHHHHHh
Q 046057 1100 FSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1100 ~lf~~~D~~~La~AL~ 1115 (1198)
+++++.|++.++..+.
T Consensus 309 ~~~~~~~~~~~~~~~~ 324 (353)
T cd03811 309 LLVPVGDEAALAAAAL 324 (353)
T ss_pred EEECCCCHHHHHHHHH
Confidence 9999999999864443
No 59
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.97 E-value=6.4e-28 Score=282.93 Aligned_cols=325 Identities=13% Similarity=0.063 Sum_probs=217.9
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
.||++++..+ +|.+.-+..++++|+++||+|+||++...... .. .....|+.+
T Consensus 4 ~~~~~~~~~~------~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~-~~--------------------~~~~~~v~~ 56 (415)
T cd03816 4 KRVCVLVLGD------IGRSPRMQYHALSLAKHGWKVDLVGYLETPPH-DE--------------------ILSNPNITI 56 (415)
T ss_pred cEEEEEEecc------cCCCHHHHHHHHHHHhcCceEEEEEecCCCCC-HH--------------------HhcCCCEEE
Confidence 4677777533 34455668899999999999999987532100 00 011245566
Q ss_pred EEeCCCCCccccccccCCCCchhhHH-HHH---HHHHHHHHhcCCCceEEEECCCCh---hHHHHHHHHhhhhcCCCCCe
Q 046057 790 YFLEPQNGFFSKGCVYGCNNDKERFA-FFC---HAALEFLLQGGFHPDIIHCHDWSS---APVAWLFKDHYVHYGLSKAR 862 (1198)
Q Consensus 790 ~~l~~~~~~f~rg~iYg~~dd~~Rf~-~F~---~aale~L~~~~~~PDVIH~Hdw~t---a~va~llk~~y~~~gl~~ip 862 (1198)
+.+......+.. .....++. ... ..++..+.. ..+|||||+|.... +.++++++... ++|
T Consensus 57 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~-~~~~Dvi~~~~~~~~~~~~~a~~~~~~~------~~~ 123 (415)
T cd03816 57 HPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYK-LRPADYILIQNPPSIPTLLIAWLYCLLR------RTK 123 (415)
T ss_pred EECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHh-cCCCCEEEEeCCCCchHHHHHHHHHHHh------CCe
Confidence 655433100100 00001110 111 112221222 24799999997332 33444444433 789
Q ss_pred EEEEecCCchh----------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCC
Q 046057 863 IVFTIHNLEFG----------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPF 926 (1198)
Q Consensus 863 vV~tIHn~~~~----------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~ 926 (1198)
+|+++|+..+. ..+.+.....||.++++|+.+.+.+.. ++....++.+|+||. ...|.|.
T Consensus 124 ~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~l~~---~~~~~~ki~vI~Ng~-~~~f~p~ 199 (415)
T cd03816 124 LIIDWHNYGYTILALKLGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDLQQ---FNNWKIRATVLYDRP-PEQFRPL 199 (415)
T ss_pred EEEEcCCchHHHHhcccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHHHHh---hhccCCCeeecCCCC-HHHceeC
Confidence 99999986431 011223456799999999999998864 334568999999994 4555552
Q ss_pred CCCCCCcccccchhhhchHHHHHHHHH-------------HhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc----
Q 046057 927 NDKFIPVSYTSENLVEGKRAAKEALQQ-------------KVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD---- 989 (1198)
Q Consensus 927 ~D~~Lp~~ys~~~~~~gk~~~k~aLrq-------------~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~---- 989 (1198)
.. ...+..+++ ..++..++..+++++||+.++||++.+++|+..+.+
T Consensus 200 ~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~ 263 (415)
T cd03816 200 PL----------------EEKHELFLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAAT 263 (415)
T ss_pred cH----------------HHHHHHHHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcc
Confidence 10 001111111 122332345678889999999999999999998863
Q ss_pred ----CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEc-cCChHHHHHHHHHccEEEEcCC---CCCCcHHHHHH
Q 046057 990 ----RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCL-TYDEPLSHLIYAGADFILVPSI---FEPCGLTQLVA 1061 (1198)
Q Consensus 990 ----~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g-~~d~~~l~~iyA~ADi~LvPS~---~EpfGLt~LEA 1061 (1198)
++++|+|+|+|+. ++.++++++++++ +++.+++ .++.+.+..+|+.||++++|+. .|++|++++||
T Consensus 264 ~~~~~~i~l~ivG~G~~---~~~l~~~~~~~~l---~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Ea 337 (415)
T cd03816 264 GPKLPKLLCIITGKGPL---KEKYLERIKELKL---KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDM 337 (415)
T ss_pred cccCCCEEEEEEecCcc---HHHHHHHHHHcCC---CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHH
Confidence 3699999999863 6889999999988 3566665 5688889999999999997533 47899999999
Q ss_pred HHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1062 MRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1062 Ma~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
|+||+|+|+++.||++|+|.++ .+|++++ |+++|+++|.
T Consensus 338 ma~G~PVI~s~~~~~~eiv~~~-------------~~G~lv~--d~~~la~~i~ 376 (415)
T cd03816 338 FGCGLPVCALDFKCIDELVKHG-------------ENGLVFG--DSEELAEQLI 376 (415)
T ss_pred HHcCCCEEEeCCCCHHHHhcCC-------------CCEEEEC--CHHHHHHHHH
Confidence 9999999999999999999987 8999994 8999995555
No 60
>PLN02949 transferase, transferring glycosyl groups
Probab=99.97 E-value=1.2e-27 Score=284.68 Aligned_cols=230 Identities=17% Similarity=0.139 Sum_probs=180.6
Q ss_pred HhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCC
Q 046057 881 MTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKS 960 (1198)
Q Consensus 881 ~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~ 960 (1198)
...+|.++++|+..++.+.... . ...++.+|+||+|.+.+.+. +.. ...
T Consensus 218 ~~~ad~ii~nS~~t~~~l~~~~--~-~~~~i~vvyp~vd~~~~~~~-----~~~-----------------------~~~ 266 (463)
T PLN02949 218 GRCAHLAMVNSSWTKSHIEALW--R-IPERIKRVYPPCDTSGLQAL-----PLE-----------------------RSE 266 (463)
T ss_pred cCCCCEEEECCHHHHHHHHHHc--C-CCCCeEEEcCCCCHHHcccC-----Ccc-----------------------ccC
Confidence 4779999999999999886421 1 13478999999987654221 000 012
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhc------CCcEEEEEecCCCh---hhHHHHHHHHHHhCCCCCCcEEEEccCC
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLD------RGGQVVLLGSAPDP---RIQNDFVNLANELHSSHADRARLCLTYD 1031 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~------~~~qLVIvGsgpdp---~i~~~L~~la~eLgl~~~drV~f~g~~d 1031 (1198)
+.+.++++||+.++||++++++|+..+.+ ++++|+|+|+++.. ...+.|+++++++++. ++|.|++..+
T Consensus 267 ~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~--~~V~f~g~v~ 344 (463)
T PLN02949 267 DPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLD--GDVEFHKNVS 344 (463)
T ss_pred CCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCC--CcEEEeCCCC
Confidence 45789999999999999999999988753 47899999997432 3446789999999984 8899999999
Q ss_pred hHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccc-ccccccccchhhhhccCCCCcEEEEcCCCHHHH
Q 046057 1032 EPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLY-DTVFDVDHDKERAQALDLEPNGFSFDGADIAGV 1110 (1198)
Q Consensus 1032 ~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~-E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~L 1110 (1198)
.+++..+|+.||++|+||..|+||++++|||++|+|||+++.||+. |+|.+.+ ...+|++++ |++++
T Consensus 345 ~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~----------~g~tG~l~~--~~~~l 412 (463)
T PLN02949 345 YRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDED----------GQQTGFLAT--TVEEY 412 (463)
T ss_pred HHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCC----------CCcccccCC--CHHHH
Confidence 8999999999999999999999999999999999999999999975 6766521 126899984 89999
Q ss_pred HHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHH
Q 046057 1111 DYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALD 1188 (1198)
Q Consensus 1111 a~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~ 1188 (1198)
+++|. +.++ ++++.+.+|++++ ..++|||+..+++
T Consensus 413 a~ai~----------------------------------------~ll~---~~~~~r~~m~~~ar~~~~~FS~e~~~~~ 449 (463)
T PLN02949 413 ADAIL----------------------------------------EVLR---MRETERLEIAAAARKRANRFSEQRFNED 449 (463)
T ss_pred HHHHH----------------------------------------HHHh---CCHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 97776 3332 2556666776666 2357999999999
Q ss_pred HHHHHHHHhC
Q 046057 1189 YMELYRAARK 1198 (1198)
Q Consensus 1189 yielY~~a~K 1198 (1198)
+.++|..+++
T Consensus 450 ~~~~i~~l~~ 459 (463)
T PLN02949 450 FKDAIRPILN 459 (463)
T ss_pred HHHHHHHHHh
Confidence 9999988753
No 61
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.97 E-value=5.3e-28 Score=284.36 Aligned_cols=326 Identities=18% Similarity=0.115 Sum_probs=219.3
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHhC--CCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCCC
Q 046057 720 APIAKVG-GLGDVVTSLSRTVQDL--NHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQN 796 (1198)
Q Consensus 720 ~P~akvG-Gl~~vV~~LarAL~~~--GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~ 796 (1198)
.|.+..| |.++++...+.+|++. ||+|+|+|..++......+..... .|. ....+++.++.+....
T Consensus 7 hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~--~f~---------~~~~~~~~~~~~~~~~ 75 (419)
T cd03806 7 HPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVES--RFN---------IELDRPRIVFFLLKYR 75 (419)
T ss_pred CCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHH--hcC---------eecCCCceEEEEecce
Confidence 5666677 9999999999999998 899999997755422111100000 000 0111233333221000
Q ss_pred CccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECC-CChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh--
Q 046057 797 GFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHD-WSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG-- 873 (1198)
Q Consensus 797 ~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hd-w~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~-- 873 (1198)
.++.+ ..|++-. ..+.++...++.+....+..||||.+|. |..+ ++ +...+ .++|+|+.+|-....
T Consensus 76 ~~~~~-~~~~r~~--~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~-~~--~~~~~-----~~~~~i~y~h~P~~~~d 144 (419)
T cd03806 76 KLVEA-STYPRFT--LLGQALGSMILGLEALLKLVPDIFIDTMGYPFT-YP--LVRLL-----GGCPVGAYVHYPTISTD 144 (419)
T ss_pred eeecc-ccCCcee--eHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccH-HH--HHHHh-----cCCeEEEEecCCcchHH
Confidence 01111 1122110 1111222222222222245899999885 4322 22 12222 277999999954110
Q ss_pred ---h--------------------------------hHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCC
Q 046057 874 ---T--------------------------------HHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGI 918 (1198)
Q Consensus 874 ---~--------------------------------~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGI 918 (1198)
. .+.+..+..||.++++|+...+.+.... . ...++.+|+||+
T Consensus 145 ~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~--~-~~~~~~vi~~gv 221 (419)
T cd03806 145 MLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLW--K-RNTKPSIVYPPC 221 (419)
T ss_pred HHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHh--C-cCCCcEEEcCCC
Confidence 0 0223345789999999999998886421 1 124899999999
Q ss_pred CCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC-------C
Q 046057 919 DQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR-------G 991 (1198)
Q Consensus 919 D~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~-------~ 991 (1198)
|.+.|.+... . ...+.++|+++||+.+.||++++++|+..+.+. +
T Consensus 222 d~~~~~~~~~---------------------------~-~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~ 273 (419)
T cd03806 222 DVEELLKLPL---------------------------D-EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEK 273 (419)
T ss_pred CHHHhccccc---------------------------c-cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCc
Confidence 9877654210 0 012457999999999999999999999998752 4
Q ss_pred cEEEEEecCCCh---hhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcE
Q 046057 992 GQVVLLGSAPDP---RIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIP 1068 (1198)
Q Consensus 992 ~qLVIvGsgpdp---~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~Pv 1068 (1198)
++|+|+|+++.. ...+.|+++++++++. ++|.|++..+.+++..+|+.||++|+||..|+||++++|||+||+||
T Consensus 274 ~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~--~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pv 351 (419)
T cd03806 274 IKLVLIGSCRNEDDEKRVEDLKLLAKELGLE--DKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIP 351 (419)
T ss_pred eEEEEEcCCCCcccHHHHHHHHHHHHHhCCC--CeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcE
Confidence 899999987532 3567788999999884 79999999999999999999999999999999999999999999999
Q ss_pred EEeCCccc-ccccc---ccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1069 VVRKTGGL-YDTVF---DVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1069 Ivt~tGGl-~E~V~---d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
|++++||. .|+|. ++ .+|++++ |+++++++|.
T Consensus 352 Ia~~~ggp~~~iv~~~~~g-------------~~G~l~~--d~~~la~ai~ 387 (419)
T cd03806 352 LAHASGGPLLDIVVPWDGG-------------PTGFLAS--TAEEYAEAIE 387 (419)
T ss_pred EEEcCCCCchheeeccCCC-------------CceEEeC--CHHHHHHHHH
Confidence 99999886 46776 55 7999984 8999997777
No 62
>PHA01633 putative glycosyl transferase group 1
Probab=99.95 E-value=5e-26 Score=260.09 Aligned_cols=252 Identities=15% Similarity=0.135 Sum_probs=186.6
Q ss_pred CCeEEEEecCCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccch
Q 046057 860 KARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSEN 939 (1198)
Q Consensus 860 ~ipvV~tIHn~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~ 939 (1198)
+.+++.|+|.... .++..+.|...+.++++|+..++.+...+. .. . ..|+||||.+.|.|..+
T Consensus 70 ~~~~~tt~~g~~~-~~~y~~~m~~~~~vIavS~~t~~~L~~~G~---~~-~-i~I~~GVD~~~f~p~~~----------- 132 (335)
T PHA01633 70 KKYFYTTCDGIPN-IEIVNKYLLQDVKFIPNSKFSAENLQEVGL---QV-D-LPVFHGINFKIVENAEK----------- 132 (335)
T ss_pred CCceEEeeCCcCc-hHHHHHHHhcCCEEEeCCHHHHHHHHHhCC---CC-c-eeeeCCCChhhcCccch-----------
Confidence 4678888888775 467778888889999999999999975432 11 2 34889999988876321
Q ss_pred hhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC------CcEEEEEecCCChhhHHHHHHHH
Q 046057 940 LVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR------GGQVVLLGSAPDPRIQNDFVNLA 1013 (1198)
Q Consensus 940 ~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~------~~qLVIvGsgpdp~i~~~L~~la 1013 (1198)
....++++++...++.++|+++||++++||++.+++|+..+.++ +++|+++|.+ ..
T Consensus 133 -------~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-----------~~ 194 (335)
T PHA01633 133 -------LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-----------QF 194 (335)
T ss_pred -------hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH-----------HH
Confidence 12356667765434678999999999999999999999998743 3577777742 12
Q ss_pred HHhCCCCCCcEEEEcc---CChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccccccccc-----cc
Q 046057 1014 NELHSSHADRARLCLT---YDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDV-----DH 1085 (1198)
Q Consensus 1014 ~eLgl~~~drV~f~g~---~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~-----d~ 1085 (1198)
+++++ +++|+|++. .+.+.+..+|++||++|+||.+|+||++++|||+||+|||+++.||++|++.++ +.
T Consensus 195 ~~l~l--~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~ 272 (335)
T PHA01633 195 TQLEV--PANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKS 272 (335)
T ss_pred HHcCC--CCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCC
Confidence 34555 578999864 356788999999999999999999999999999999999999999999986531 01
Q ss_pred chhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCH
Q 046057 1086 DKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGR 1165 (1198)
Q Consensus 1086 ~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~ 1165 (1198)
++...-..+....||.|+..|+++|+.+|. +++.. .++
T Consensus 273 ~~v~~~~~~~~g~g~~~~~~d~~~la~ai~----------------------------------------~~~~~--~~~ 310 (335)
T PHA01633 273 SKVEEYYDKEHGQKWKIHKFQIEDMANAII----------------------------------------LAFEL--QDR 310 (335)
T ss_pred CCHHHhcCcccCceeeecCCCHHHHHHHHH----------------------------------------HHHhc--cCh
Confidence 111111111225699999999999999998 66655 234
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHH
Q 046057 1166 EWLNSLCKTVMEQDWSWNRPALDYME 1191 (1198)
Q Consensus 1166 e~~~~L~~~am~qdfSW~~~A~~yie 1191 (1198)
+.+ .+..+...+.|+|+.++.+|++
T Consensus 311 ~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 311 EER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred hhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 332 2222234578999999999974
No 63
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.95 E-value=1.1e-26 Score=269.68 Aligned_cols=259 Identities=14% Similarity=0.046 Sum_probs=188.3
Q ss_pred CCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh------------h------------hHHHHHHhccC
Q 046057 830 FHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG------------T------------HHIGKAMTYAD 885 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~------------~------------~li~~~~~~AD 885 (1198)
.++|+||++....+ .++.. ...++|+|++.|+.... . .+.+..+..+|
T Consensus 103 ~~~D~v~~~~~~~~---~~~~~-----~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad 174 (397)
T TIGR03087 103 EPVDAIVVFSSAMA---QYVTP-----HVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFD 174 (397)
T ss_pred CCCCEEEEeccccc---eeccc-----cccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCC
Confidence 48999999864322 11111 12378999999986411 0 11233567899
Q ss_pred EEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEE
Q 046057 886 KATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLV 965 (1198)
Q Consensus 886 ~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plI 965 (1198)
.++++|+..++.+... ......++.+|+||+|.+.|.|..... ..++ .+.++|
T Consensus 175 ~vi~~S~~~~~~l~~~--~~~~~~~v~vipngvd~~~f~~~~~~~------------------------~~~~-~~~~~i 227 (397)
T TIGR03087 175 AATFVSRAEAELFRRL--APEAAGRITAFPNGVDADFFSPDRDYP------------------------NPYP-PGKRVL 227 (397)
T ss_pred eEEEcCHHHHHHHHHh--CCCCCCCeEEeecccchhhcCCCcccc------------------------CCCC-CCCcEE
Confidence 9999999999988632 223346899999999999887632110 0011 255789
Q ss_pred EEEecCCCccCHHHHHH----HHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 966 GIITRLTHQKGIHLIKH----AIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 966 g~VGRL~~qKGidlIle----Al~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
+|+||+.+.||++.++. ++..+.+ ++++|+|+|+++. ..+++ ++. .++|.|+|.+++ +..+|
T Consensus 228 lf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~----~~~~~----l~~--~~~V~~~G~v~~--~~~~~ 295 (397)
T TIGR03087 228 VFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS----PAVRA----LAA--LPGVTVTGSVAD--VRPYL 295 (397)
T ss_pred EEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh----HHHHH----hcc--CCCeEEeeecCC--HHHHH
Confidence 99999999999998874 4444443 5799999999863 23333 333 257999998874 67899
Q ss_pred HHccEEEEcCC-CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcc
Q 046057 1040 AGADFILVPSI-FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIH 1118 (1198)
Q Consensus 1040 A~ADi~LvPS~-~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~ 1118 (1198)
+.||++|+||. .|++|++++|||+||+|||+++.|+. .+.... .+|++++ .|+++++++|.
T Consensus 296 ~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~-------------~~g~lv~-~~~~~la~ai~--- 357 (397)
T TIGR03087 296 AHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALP-------------GAELLVA-ADPADFAAAIL--- 357 (397)
T ss_pred HhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccC-------------CcceEeC-CCHHHHHHHHH---
Confidence 99999999998 59999999999999999999987532 222222 5699997 89999995554
Q ss_pred cccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHHHHHHH
Q 046057 1119 VSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV---MEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~yielY~ 1194 (1198)
.+.++++.+.+|++++ +.+.|||+..+++|.++|.
T Consensus 358 -----------------------------------------~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 358 -----------------------------------------ALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred -----------------------------------------HHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 4557888888888887 4578999999999999985
No 64
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.95 E-value=1.9e-26 Score=276.81 Aligned_cols=329 Identities=15% Similarity=0.152 Sum_probs=211.9
Q ss_pred CCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhC-CCeEEEEeeCCCCCcccccccccccccccC---CCceeEEee
Q 046057 706 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDL-NHNVDIILPKYDCLKFSDVKDLGYNRSYHW---GGTEIKVWF 781 (1198)
Q Consensus 706 ~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~-GH~V~VItP~y~~~~~~~~~~l~~~~~~~~---g~~~i~V~~ 781 (1198)
.++.-||++|+.-..||. -|.+.--.--|-+|++. |++|+++.|.....+...++.- ...|.. ....++-|-
T Consensus 319 ~~~~r~~~ivTtAslPWm--TGtavnpL~rAayLa~~~~~~VtlviPWl~~~dq~~vy~~--~~~F~~p~eQe~~ir~wl 394 (794)
T PLN02501 319 SDGKRHVAIVTTASLPWM--TGTAVNPLFRAAYLAKSAKQNVTLLVPWLCKSDQELVYPN--NLTFSSPEEQESYIRNWL 394 (794)
T ss_pred ccCCCeEEEEEcccCccc--ccccccHHHHHHHhcccCCceEEEEEecCCccccccccCC--CcccCCHHHHHHHHHHHH
Confidence 345679999999999983 33333323334456776 8999999997553222222110 000100 001122221
Q ss_pred ----ceecCeEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCC-hhHH--HHHHHHhhh
Q 046057 782 ----GKVEGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWS-SAPV--AWLFKDHYV 854 (1198)
Q Consensus 782 ----~~~~Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~-ta~v--a~llk~~y~ 854 (1198)
+...++.+.|.+- .|..+ .|-.+-...+.+.+.. ++|||||++... .++. +...+..+
T Consensus 395 ~~r~g~~~~~~i~fYpg---~~~~~---------~~SI~p~gdI~~~L~~--f~PDVVHLatP~~LGw~~~Glr~ArKl- 459 (794)
T PLN02501 395 EERIGFKADFKISFYPG---KFSKE---------RRSIIPAGDTSQFIPS--KDADIAILEEPEHLNWYHHGKRWTDKF- 459 (794)
T ss_pred HHhcCCCCCceEEeecc---hhccC---------CccccchHHHHHHhhc--cCCCEEEECCchhhccHHHHHHHHHHc-
Confidence 1123444444442 12110 1111222334455544 699999999632 2223 33333333
Q ss_pred hcCCCCCeEEEEecCCchh----------hh----HHHHHHh--ccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCC
Q 046057 855 HYGLSKARIVFTIHNLEFG----------TH----HIGKAMT--YADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGI 918 (1198)
Q Consensus 855 ~~gl~~ipvV~tIHn~~~~----------~~----li~~~~~--~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGI 918 (1198)
+ |+|.++|+.... .. ++...+. |||.++++|.... .+. ...+. ..|||
T Consensus 460 -----~-PVVasyHTny~eYl~~y~~g~L~~~llk~l~~~v~r~hcD~VIaPS~atq-~L~--------~~vI~-nVnGV 523 (794)
T PLN02501 460 -----N-HVVGVVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQ-DLP--------KSVIC-NVHGV 523 (794)
T ss_pred -----C-CeEEEEeCCcHHHHhHhcchhHHHHHHHHHHHHHHHhhCCEEEcCCHHHH-Hhc--------cccee-ecccc
Confidence 5 899999987532 11 2222333 3899999996666 442 11222 23799
Q ss_pred CCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEE
Q 046057 919 DQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVL 996 (1198)
Q Consensus 919 D~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVI 996 (1198)
|++.|.|.. . ...++++|++. ..+.++|+|||.++||++.|++|+..+.. ++++|+|
T Consensus 524 Dte~F~P~~-----------------r---~~~~r~lgi~~-~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvI 582 (794)
T PLN02501 524 NPKFLKIGE-----------------K---VAEERELGQQA-FSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDV 582 (794)
T ss_pred cccccCCcc-----------------h---hHHHHhcCCcc-ccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEE
Confidence 999998731 1 11124666652 33458999999999999999999998764 3799999
Q ss_pred EecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccc
Q 046057 997 LGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGL 1076 (1198)
Q Consensus 997 vGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl 1076 (1198)
+|+||+ ++.+++++.++++ +|.|+|..+. ...+|+.+||+|+||.+|+||++++|||+||+|||+++.||.
T Consensus 583 VGDGP~---reeLe~la~eLgL----~V~FLG~~dd--~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~ 653 (794)
T PLN02501 583 FGNGED---AHEVQRAAKRLDL----NLNFLKGRDH--ADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN 653 (794)
T ss_pred EcCCcc---HHHHHHHHHHcCC----EEEecCCCCC--HHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC
Confidence 999974 6788999988876 3889887655 347899999999999999999999999999999999999985
Q ss_pred cccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1077 YDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1077 ~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.. +.++ .+|+++ +|+++++++|.
T Consensus 654 e~-V~~g-------------~nGll~--~D~EafAeAI~ 676 (794)
T PLN02501 654 EF-FRSF-------------PNCLTY--KTSEDFVAKVK 676 (794)
T ss_pred ce-Eeec-------------CCeEec--CCHHHHHHHHH
Confidence 44 5555 678875 68999997777
No 65
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.95 E-value=6.2e-28 Score=265.20 Aligned_cols=188 Identities=41% Similarity=0.731 Sum_probs=146.1
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccc--cccccccccccCC-------CceeEEee
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSD--VKDLGYNRSYHWG-------GTEIKVWF 781 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~--~~~l~~~~~~~~g-------~~~i~V~~ 781 (1198)
||+||+.|++|++++|||++++.+|+++|+++||+|.||+|.|+++.... ...+.. ...... ...+.++.
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRR-LSVPFGGPVPVGVWYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEE-ES-STTCEEEEE----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEE-eccccccccccccceEEEEEE
Confidence 79999999999999999999999999999999999999999997766543 111110 011111 14567888
Q ss_pred ceecCeEEEEeCCCCCccccccccCC-----CCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhc
Q 046057 782 GKVEGLSVYFLEPQNGFFSKGCVYGC-----NNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHY 856 (1198)
Q Consensus 782 ~~~~Gv~v~~l~~~~~~f~rg~iYg~-----~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~ 856 (1198)
...+|+++|+++++. +|.+..+|+. .|+.+||.+||+++++++++.+.+|||||||||+++++|.+++..+...
T Consensus 80 ~~~~~v~v~~i~~~~-~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~ 158 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPE-YFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQD 158 (245)
T ss_dssp EEETTEEEEEEESHH-HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS-
T ss_pred EEcCCccEEEecChh-hccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccc
Confidence 888999999999874 7788889975 7999999999999999999988899999999999999999999876433
Q ss_pred -CCCCCeEEEEecCCchh-----------------------------hhHHHHHHhccCEEEEeCHHHHHHHhC
Q 046057 857 -GLSKARIVFTIHNLEFG-----------------------------THHIGKAMTYADKATTVSHTYSKEVAG 900 (1198)
Q Consensus 857 -gl~~ipvV~tIHn~~~~-----------------------------~~li~~~~~~AD~VitVS~~~a~el~~ 900 (1198)
.+.++|+|+||||+.++ .++++.++.+||+|+|||++|++++..
T Consensus 159 ~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 159 PFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp -----SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred cccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 34579999999998664 148889999999999999999999974
No 66
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.95 E-value=7.1e-26 Score=271.91 Aligned_cols=263 Identities=16% Similarity=0.170 Sum_probs=196.6
Q ss_pred CCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhh-----------hHHH---HHHhccCEEEEeCHHHH
Q 046057 830 FHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGT-----------HHIG---KAMTYADKATTVSHTYS 895 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~-----------~li~---~~~~~AD~VitVS~~~a 895 (1198)
.++||+|++-......+ ++... ..+|+++++|+..+.. +... ..+..+|.++++|+..+
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~------~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~ 282 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENK------GPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQN 282 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcC------CCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHH
Confidence 47899999753322222 22222 2789999999643221 1111 23456799999999988
Q ss_pred HHHhCC-CCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Q 046057 896 KEVAGD-PAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQ 974 (1198)
Q Consensus 896 ~el~~~-~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~q 974 (1198)
+.+... +.+.....++.+||||++...+.|.. ..+...|+++|||.+.
T Consensus 283 ~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~~-------------------------------~r~~~~il~vGrl~~~ 331 (500)
T TIGR02918 283 QILKNQFKKYYNIEPRIYTIPVGSLDELQYPEQ-------------------------------ERKPFSIITASRLAKE 331 (500)
T ss_pred HHHHHHhhhhcCCCCcEEEEcCCCcccccCccc-------------------------------ccCCeEEEEEeccccc
Confidence 877531 12223356899999998754432210 0134579999999999
Q ss_pred cCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCC
Q 046057 975 KGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFE 1052 (1198)
Q Consensus 975 KGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~E 1052 (1198)
||++.+++|+..+.+ ++++|+|+|+|+. .+.|+++++++++. ++|.|+|..+ +..+|+.||++|+||.+|
T Consensus 332 Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~---~~~l~~~i~~~~l~--~~V~f~G~~~---~~~~~~~adv~v~pS~~E 403 (500)
T TIGR02918 332 KHIDWLVKAVVKAKKSVPELTFDIYGEGGE---KQKLQKIINENQAQ--DYIHLKGHRN---LSEVYKDYELYLSASTSE 403 (500)
T ss_pred cCHHHHHHHHHHHHhhCCCeEEEEEECchh---HHHHHHHHHHcCCC--CeEEEcCCCC---HHHHHHhCCEEEEcCccc
Confidence 999999999999874 4799999999863 47889999998884 7899988542 568899999999999999
Q ss_pred CCcHHHHHHHHhCCcEEEeCCc-cccccccccccchhhhhccCCCCcEEEEcC----CC----HHHHHHHHhhccccccc
Q 046057 1053 PCGLTQLVAMRYGSIPVVRKTG-GLYDTVFDVDHDKERAQALDLEPNGFSFDG----AD----IAGVDYALNSIHVSSFH 1123 (1198)
Q Consensus 1053 pfGLt~LEAMa~G~PvIvt~tG-Gl~E~V~d~d~~~~~~~~~~~~~nG~lf~~----~D----~~~La~AL~~~~~~~~~ 1123 (1198)
+||++++|||+||+|||++++| |.+|+|.++ .||+++++ +| +++|+++|.
T Consensus 404 gfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g-------------~nG~lv~~~~~~~d~~~~~~~la~~I~-------- 462 (500)
T TIGR02918 404 GFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDN-------------KNGYLIPIDEEEDDEDQIITALAEKIV-------- 462 (500)
T ss_pred cccHHHHHHHHhCCCEEEecCCCCCHHHccCC-------------CCEEEEeCCccccchhHHHHHHHHHHH--------
Confidence 9999999999999999999986 899999998 89999984 34 556664444
Q ss_pred ccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHHHHHHHHHH
Q 046057 1124 TTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~yielY~~a 1196 (1198)
.+++ +..+.+|++++ ..+.|||+.++++|.++|+++
T Consensus 463 ------------------------------------~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 463 ------------------------------------EYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred ------------------------------------HHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 4443 33467787777 457899999999999999864
No 67
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.95 E-value=6.6e-26 Score=257.03 Aligned_cols=213 Identities=17% Similarity=0.166 Sum_probs=167.5
Q ss_pred CCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCch-------h--------------------hhHHHHHHh
Q 046057 830 FHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEF-------G--------------------THHIGKAMT 882 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~-------~--------------------~~li~~~~~ 882 (1198)
.++|+||++....+... + ...++|.+.++|+... . ..+....+.
T Consensus 82 ~~~D~v~~~~~~~~~~~--~-------~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (351)
T cd03804 82 SGYDLVISSSHAVAKGV--I-------TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAA 152 (351)
T ss_pred cCCCEEEEcCcHHhccc--c-------CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhc
Confidence 47999999764222111 1 1137899999997410 0 012234568
Q ss_pred ccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCC
Q 046057 883 YADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDL 962 (1198)
Q Consensus 883 ~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~ 962 (1198)
.+|.++++|+...+.+... + ..+..+|+||+|.+.|.+.. ...
T Consensus 153 ~~d~ii~~S~~~~~~~~~~--~---~~~~~vi~~~~d~~~~~~~~--------------------------------~~~ 195 (351)
T cd03804 153 RVDYFIANSRFVARRIKKY--Y---GRDATVIYPPVDTDRFTPAE--------------------------------EKE 195 (351)
T ss_pred CCCEEEECCHHHHHHHHHH--h---CCCcEEECCCCCHhhcCcCC--------------------------------CCC
Confidence 8999999999999988632 1 13468899999988776521 134
Q ss_pred cEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHc
Q 046057 963 PLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGA 1042 (1198)
Q Consensus 963 plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~A 1042 (1198)
+.++++||+.+.||++.+++|+..+. ++|+|+|+|++ .+.+++ +. .++|.|+|.++.+++..+|+.|
T Consensus 196 ~~il~~G~~~~~K~~~~li~a~~~~~---~~l~ivG~g~~---~~~l~~-----~~--~~~V~~~g~~~~~~~~~~~~~a 262 (351)
T cd03804 196 DYYLSVGRLVPYKRIDLAIEAFNKLG---KRLVVIGDGPE---LDRLRA-----KA--GPNVTFLGRVSDEELRDLYARA 262 (351)
T ss_pred CEEEEEEcCccccChHHHHHHHHHCC---CcEEEEECChh---HHHHHh-----hc--CCCEEEecCCCHHHHHHHHHhC
Confidence 57899999999999999999998873 89999999853 233333 22 4789999999999999999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1043 DFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1043 Di~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
|++|+||. |+||++++|||+||+|+|+++.||..|+|.++ .+|+++++.|+++|+++|.
T Consensus 263 d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~-------------~~G~~~~~~~~~~la~~i~ 321 (351)
T cd03804 263 RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDG-------------VTGILFEEQTVESLAAAVE 321 (351)
T ss_pred CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCC-------------CCEEEeCCCCHHHHHHHHH
Confidence 99999999 99999999999999999999999999999987 7899999999999996666
No 68
>PLN02275 transferase, transferring glycosyl groups
Probab=99.95 E-value=2.9e-25 Score=256.62 Aligned_cols=304 Identities=13% Similarity=0.041 Sum_probs=208.6
Q ss_pred CcHHHHHHHHHHHHHhCCC-eEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCCCCccccccc
Q 046057 726 GGLGDVVTSLSRTVQDLNH-NVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGCV 804 (1198)
Q Consensus 726 GGl~~vV~~LarAL~~~GH-~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~~~f~rg~i 804 (1198)
+|.+.-+..++..|.++|| +|+|++........ + .....|+.++.+..+ .....
T Consensus 15 ~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~----~-----------------~~~~~~v~v~r~~~~-~~~~~--- 69 (371)
T PLN02275 15 FGRSPRMQYHALSLARQASFQVDVVAYGGSEPIP----A-----------------LLNHPSIHIHLMVQP-RLLQR--- 69 (371)
T ss_pred CCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCH----H-----------------HhcCCcEEEEECCCc-ccccc---
Confidence 4567778888888888876 79999854221000 0 012245666666421 11100
Q ss_pred cCCCCchhh---HH-H---HHHHHHHHHHhcCCCceEEEECCCCh---hHHHHHHHHhhhhcCCCCCeEEEEecCCchh-
Q 046057 805 YGCNNDKER---FA-F---FCHAALEFLLQGGFHPDIIHCHDWSS---APVAWLFKDHYVHYGLSKARIVFTIHNLEFG- 873 (1198)
Q Consensus 805 Yg~~dd~~R---f~-~---F~~aale~L~~~~~~PDVIH~Hdw~t---a~va~llk~~y~~~gl~~ipvV~tIHn~~~~- 873 (1198)
... ..+ +. + +...++.++.....+|||||+|.... ..++.++.... ++|+|+++|+..+.
T Consensus 70 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~------~~p~v~~~h~~~~~~ 140 (371)
T PLN02275 70 LPR---VLYALALLLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLR------RAKFVIDWHNFGYTL 140 (371)
T ss_pred ccc---chHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHh------CCCEEEEcCCccHHH
Confidence 000 111 11 1 11222332222246899999997443 33444444332 78999999986321
Q ss_pred ---------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccc
Q 046057 874 ---------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSE 938 (1198)
Q Consensus 874 ---------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~ 938 (1198)
..+.+...+.+|.++++|+.+.+.+... ++. ++.+|+||+ .+.|.|....
T Consensus 141 ~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~--~g~---~i~vi~n~~-~~~f~~~~~~--------- 205 (371)
T PLN02275 141 LALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHELDQN--WGI---RATVLYDQP-PEFFRPASLE--------- 205 (371)
T ss_pred HhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHh--cCC---CeEEECCCC-HHHcCcCCch---------
Confidence 1123345577999999999999988642 122 278999995 4556552110
Q ss_pred hhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhh-------------------cCCcEEEEEec
Q 046057 939 NLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTL-------------------DRGGQVVLLGS 999 (1198)
Q Consensus 939 ~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll-------------------~~~~qLVIvGs 999 (1198)
. .+..++..+++++||+.++||++.+++|+..+. .++++|+|+|+
T Consensus 206 --------------~--~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~ 269 (371)
T PLN02275 206 --------------I--RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGK 269 (371)
T ss_pred --------------h--cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeC
Confidence 0 011123457889999999999999999998763 24799999999
Q ss_pred CCChhhHHHHHHHHHHhCCCCCCcEEEEcc-CChHHHHHHHHHccEEEEcC--C-CCCCcHHHHHHHHhCCcEEEeCCcc
Q 046057 1000 APDPRIQNDFVNLANELHSSHADRARLCLT-YDEPLSHLIYAGADFILVPS--I-FEPCGLTQLVAMRYGSIPVVRKTGG 1075 (1198)
Q Consensus 1000 gpdp~i~~~L~~la~eLgl~~~drV~f~g~-~d~~~l~~iyA~ADi~LvPS--~-~EpfGLt~LEAMa~G~PvIvt~tGG 1075 (1198)
|+. ++.+++++++++++ ++.|+++ ++.+.+..+|+.||++|+|+ . .|++|++++|||+||+|+|+++.||
T Consensus 270 G~~---~~~l~~~~~~~~l~---~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg 343 (371)
T PLN02275 270 GPQ---KAMYEEKISRLNLR---HVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 343 (371)
T ss_pred CCC---HHHHHHHHHHcCCC---ceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCC
Confidence 974 67899999999983 4888775 68888999999999999863 2 4899999999999999999999999
Q ss_pred ccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1076 LYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1076 l~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|.++ .+|++++ |+++|+++|.
T Consensus 344 ~~eiv~~g-------------~~G~lv~--~~~~la~~i~ 368 (371)
T PLN02275 344 IGELVKDG-------------KNGLLFS--SSSELADQLL 368 (371)
T ss_pred hHHHccCC-------------CCeEEEC--CHHHHHHHHH
Confidence 99999987 8999997 6999999987
No 69
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.94 E-value=1.3e-24 Score=254.59 Aligned_cols=262 Identities=14% Similarity=0.106 Sum_probs=204.4
Q ss_pred CCceEEEECCCCh-hHHHHHHHHhhhhcCCCCCeEEEEecCCchh--------hhHHHHHHhccCEEEEeCHHHHHHHhC
Q 046057 830 FHPDIIHCHDWSS-APVAWLFKDHYVHYGLSKARIVFTIHNLEFG--------THHIGKAMTYADKATTVSHTYSKEVAG 900 (1198)
Q Consensus 830 ~~PDVIH~Hdw~t-a~va~llk~~y~~~gl~~ipvV~tIHn~~~~--------~~li~~~~~~AD~VitVS~~~a~el~~ 900 (1198)
.++||+|+|.... +....+++..+ ..+++|.++|+.... ..+.+..+..+|.++++|+...+.+..
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~-----~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~ 200 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEY-----LRKRVISRAHGYDLYEDRYPSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK 200 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhc-----CCceEEEEeccchhhhhhccccchHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 4678888874333 32333344433 134599999976532 123345568999999999999998863
Q ss_pred CCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHH
Q 046057 901 DPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLI 980 (1198)
Q Consensus 901 ~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlI 980 (1198)
.++....++.+|+||+|...+.+.. ...+.+.|+++||+.+.||++.+
T Consensus 201 --~~~~~~~ki~vi~~gv~~~~~~~~~------------------------------~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 201 --RYPAYKEKIKVSYLGVSDPGIISKP------------------------------SKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred --HCCCccccEEEEECCcccccccCCC------------------------------CCCCCEEEEEeeccccccCHHHH
Confidence 3445567899999999876543310 01256789999999999999999
Q ss_pred HHHHHHhhcC----CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHH--ccEEEEcCCCCCC
Q 046057 981 KHAIWRTLDR----GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAG--ADFILVPSIFEPC 1054 (1198)
Q Consensus 981 leAl~~ll~~----~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~--ADi~LvPS~~Epf 1054 (1198)
++|+..+.+. .+.++++|+|+ ....+++++++++. .++|.|+|.++.+++..+|+. +|++++||..|++
T Consensus 249 i~a~~~l~~~~p~~~l~~~iiG~g~---~~~~l~~~~~~~~~--~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~ 323 (407)
T cd04946 249 IKALAALAKARPSIKIKWTHIGGGP---LEDTLKELAESKPE--NISVNFTGELSNSEVYKLYKENPVDVFVNLSESEGL 323 (407)
T ss_pred HHHHHHHHHhCCCceEEEEEEeCch---HHHHHHHHHHhcCC--CceEEEecCCChHHHHHHHhhcCCCEEEeCCccccc
Confidence 9999999754 46678899885 35678888877665 478999999999888899975 7899999999999
Q ss_pred cHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCC-CHHHHHHHHhhccccccccccccccccc
Q 046057 1055 GLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGA-DIAGVDYALNSIHVSSFHTTSRLYIYED 1133 (1198)
Q Consensus 1055 GLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~-D~~~La~AL~~~~~~~~~~~~~~~~~~~ 1133 (1198)
|++++|||++|+|||++++||.+|+|.++ .+|+++++. |+++++++|.
T Consensus 324 p~~llEAma~G~PVIas~vgg~~e~i~~~-------------~~G~l~~~~~~~~~la~~I~------------------ 372 (407)
T cd04946 324 PVSIMEAMSFGIPVIATNVGGTPEIVDNG-------------GNGLLLSKDPTPNELVSSLS------------------ 372 (407)
T ss_pred cHHHHHHHHcCCCEEeCCCCCcHHHhcCC-------------CcEEEeCCCCCHHHHHHHHH------------------
Confidence 99999999999999999999999999986 799999864 8999996655
Q ss_pred ccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHHH
Q 046057 1134 LEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV---MEQDWSWNRPALDYM 1190 (1198)
Q Consensus 1134 ~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~yi 1190 (1198)
.+.++++.+.+|++++ ++++|+|+....+|.
T Consensus 373 --------------------------~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 373 --------------------------KFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred --------------------------HHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 4446888888898888 568999999988775
No 70
>PHA01630 putative group 1 glycosyl transferase
Probab=99.93 E-value=1.6e-24 Score=247.94 Aligned_cols=194 Identities=13% Similarity=0.096 Sum_probs=144.6
Q ss_pred hhHHHHHHHHhhhhcCCCCCeEEEEecCCchhh-hHHHHH-HhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCC
Q 046057 842 SAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGT-HHIGKA-MTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGID 919 (1198)
Q Consensus 842 ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~-~li~~~-~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID 919 (1198)
+....+..|..... .++|+|+++|+..... .++... ...+|.++++|+...+.+...+. . ...++.+||||||
T Consensus 54 ~~~~~~~~~~~~~~---~~~~~v~e~~~~~~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~-~-~~~~i~vIpNGVd 128 (331)
T PHA01630 54 TIFNSMLFWKGIPH---VGKNIVFEVADTDAISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGL-K-IPQPIYVIPHNLN 128 (331)
T ss_pred hhhhHHHHHhhccc---cCCceEEEEEeechhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCC-C-CCCCEEEECCCCC
Confidence 33344444544311 2679999999965433 344445 57799999999999999864331 1 1358999999999
Q ss_pred CCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEE
Q 046057 920 QDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLL 997 (1198)
Q Consensus 920 ~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIv 997 (1198)
.+.|.|.... ..+..+++++||+.++||++.+++|+..+.+ .+++|+++
T Consensus 129 ~~~f~~~~~~-----------------------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~lliv 179 (331)
T PHA01630 129 PRMFEYKPKE-----------------------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIK 179 (331)
T ss_pred HHHcCCCccc-----------------------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEE
Confidence 9888652110 0134567788899999999999999999875 47899999
Q ss_pred ecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccc
Q 046057 998 GSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLY 1077 (1198)
Q Consensus 998 Gsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~ 1077 (1198)
|+++.. ..+ .++. . +.+.++.+.+..+|+.||++|+||++|+||++++|||+||+|+|+|++||+.
T Consensus 180 G~~~~~---~~l------~~~~--~---~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~ 245 (331)
T PHA01630 180 SSNMLD---PRL------FGLN--G---VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWS 245 (331)
T ss_pred eCcccc---hhh------cccc--c---eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCch
Confidence 976321 111 1221 1 2345677888999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 046057 1078 DTVFDV 1083 (1198)
Q Consensus 1078 E~V~d~ 1083 (1198)
|+|.++
T Consensus 246 E~i~~~ 251 (331)
T PHA01630 246 EWVLSN 251 (331)
T ss_pred hhccCC
Confidence 999987
No 71
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.93 E-value=2.2e-24 Score=246.13 Aligned_cols=257 Identities=16% Similarity=0.190 Sum_probs=197.5
Q ss_pred CCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhh-------------hHHHHHHhccCEEEEeCHHHHH
Q 046057 830 FHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGT-------------HHIGKAMTYADKATTVSHTYSK 896 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~-------------~li~~~~~~AD~VitVS~~~a~ 896 (1198)
.++||||+|.......+ ++... ...+.|+++|+..... ..+...+..+|.++++|+...+
T Consensus 98 ~~~diii~~~~~~~~~~-~~~~~------~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~ 170 (372)
T cd04949 98 TKPDVFILDRPTLDGQA-LLNMK------KAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQ 170 (372)
T ss_pred CCCCEEEECCccccchh-HHhcc------CCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHH
Confidence 58999999865443331 22221 2457889999643210 1122335779999999999988
Q ss_pred HHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccC
Q 046057 897 EVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKG 976 (1198)
Q Consensus 897 el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKG 976 (1198)
.+... +. ...++.+||||++.+.+.|.. ........|+++||+.+.||
T Consensus 171 ~l~~~--~~-~~~~v~~ip~g~~~~~~~~~~-----------------------------~~~~~~~~i~~vgrl~~~K~ 218 (372)
T cd04949 171 DLQKQ--FG-NYNPIYTIPVGSIDPLKLPAQ-----------------------------FKQRKPHKIITVARLAPEKQ 218 (372)
T ss_pred HHHHH--hC-CCCceEEEcccccChhhcccc-----------------------------hhhcCCCeEEEEEccCcccC
Confidence 88642 22 223589999999987655410 00024568999999999999
Q ss_pred HHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCC
Q 046057 977 IHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPC 1054 (1198)
Q Consensus 977 idlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~Epf 1054 (1198)
++.+++|+..+.+ ++++|+|+|.|+. ...+..+.+++++ +++|.|.|.. +.+..+|+.||++|+||.+|+|
T Consensus 219 ~~~li~a~~~l~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~--~~~v~~~g~~--~~~~~~~~~ad~~v~~S~~Eg~ 291 (372)
T cd04949 219 LDQLIKAFAKVVKQVPDATLDIYGYGDE---EEKLKELIEELGL--EDYVFLKGYT--RDLDEVYQKAQLSLLTSQSEGF 291 (372)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeCch---HHHHHHHHHHcCC--cceEEEcCCC--CCHHHHHhhhhEEEeccccccc
Confidence 9999999999874 5799999999853 4567777788877 4789998843 3478999999999999999999
Q ss_pred cHHHHHHHHhCCcEEEeCCc-cccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhccccccccccccccccc
Q 046057 1055 GLTQLVAMRYGSIPVVRKTG-GLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYED 1133 (1198)
Q Consensus 1055 GLt~LEAMa~G~PvIvt~tG-Gl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~ 1133 (1198)
|++++|||++|+|+|+++.| |..++|.++ .+|+++++.|+++|+++|.
T Consensus 292 ~~~~lEAma~G~PvI~~~~~~g~~~~v~~~-------------~~G~lv~~~d~~~la~~i~------------------ 340 (372)
T cd04949 292 GLSLMEALSHGLPVISYDVNYGPSEIIEDG-------------ENGYLVPKGDIEALAEAII------------------ 340 (372)
T ss_pred ChHHHHHHhCCCCEEEecCCCCcHHHcccC-------------CCceEeCCCcHHHHHHHHH------------------
Confidence 99999999999999999988 899999987 8999999999999995555
Q ss_pred ccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHHH
Q 046057 1134 LEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALDY 1189 (1198)
Q Consensus 1134 ~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~y 1189 (1198)
.+.++++.+.++++++ ..+.|||+.++++|
T Consensus 341 --------------------------~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 341 --------------------------ELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred --------------------------HHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 4557788888888888 34689999998765
No 72
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.92 E-value=4e-24 Score=254.70 Aligned_cols=283 Identities=16% Similarity=0.153 Sum_probs=205.3
Q ss_pred CCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhh---------hHHHHHHhccCEEEEeCHHHHHHHhC
Q 046057 830 FHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGT---------HHIGKAMTYADKATTVSHTYSKEVAG 900 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~---------~li~~~~~~AD~VitVS~~~a~el~~ 900 (1198)
...|+||+||.+..++|.+++... .+.|+++.+|...... ..+-.+|..+|.+...+..++..+..
T Consensus 130 ~~~d~iwihDyhl~llp~~lr~~~-----~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~ 204 (460)
T cd03788 130 RPGDLVWVHDYHLLLLPQMLRERG-----PDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLS 204 (460)
T ss_pred CCCCEEEEeChhhhHHHHHHHhhC-----CCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 356999999999999998887653 3789999999765432 23346677799999999887766543
Q ss_pred C--CC------------CCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEE
Q 046057 901 D--PA------------IAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVG 966 (1198)
Q Consensus 901 ~--~~------------l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg 966 (1198)
. .. +..+..++.+||||||++.|.+... ....+..+++..+.. .+.++|+
T Consensus 205 ~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~---------------~~~~~~~~~~~~~~~-~~~~~il 268 (460)
T cd03788 205 CCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAA---------------SPEVQERAAELRERL-GGRKLIV 268 (460)
T ss_pred HHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhc---------------CchhHHHHHHHHHhc-CCCEEEE
Confidence 1 00 1122346899999999988765211 112222333333433 3678999
Q ss_pred EEecCCCccCHHHHHHHHHHhhcC--C----cEEEEEecCC-----C-hhhHHHHHHHHHHhCCCCC----CcEEEE-cc
Q 046057 967 IITRLTHQKGIHLIKHAIWRTLDR--G----GQVVLLGSAP-----D-PRIQNDFVNLANELHSSHA----DRARLC-LT 1029 (1198)
Q Consensus 967 ~VGRL~~qKGidlIleAl~~ll~~--~----~qLVIvGsgp-----d-p~i~~~L~~la~eLgl~~~----drV~f~-g~ 1029 (1198)
++|||++.||++.+++|+..++++ + ++|+++|.+. + ..++..+++++.+++..+. ..|+++ +.
T Consensus 269 ~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~ 348 (460)
T cd03788 269 GVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRS 348 (460)
T ss_pred EecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCC
Confidence 999999999999999999988753 2 5688887532 1 1355566677766654432 235555 45
Q ss_pred CChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCc----EEEeCCccccccccccccchhhhhccCCCCcEEEEcCC
Q 046057 1030 YDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSI----PVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGA 1105 (1198)
Q Consensus 1030 ~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~P----vIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~ 1105 (1198)
++.+++..+|+.||++|+||..|+||++++|||+||+| +|+++.+|..+. + .+|++|++.
T Consensus 349 v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~-------------~~g~lv~p~ 412 (460)
T cd03788 349 LPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---L-------------SGALLVNPY 412 (460)
T ss_pred CCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---c-------------CCCEEECCC
Confidence 68889999999999999999999999999999999999 999999998887 3 569999999
Q ss_pred CHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChH
Q 046057 1106 DIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWN 1183 (1198)
Q Consensus 1106 D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~ 1183 (1198)
|+++++++|. ++++ ..++.++.+.+++ ....|+|+
T Consensus 413 d~~~la~ai~----------------------------------------~~l~---~~~~e~~~~~~~~~~~v~~~~~~ 449 (460)
T cd03788 413 DIDEVADAIH----------------------------------------RALT---MPLEERRERHRKLREYVRTHDVQ 449 (460)
T ss_pred CHHHHHHHHH----------------------------------------HHHc---CCHHHHHHHHHHHHHHHHhCCHH
Confidence 9999998777 4442 2334444444443 23579999
Q ss_pred HHHHHHHHH
Q 046057 1184 RPALDYMEL 1192 (1198)
Q Consensus 1184 ~~A~~yiel 1192 (1198)
..+++|+.-
T Consensus 450 ~w~~~~l~~ 458 (460)
T cd03788 450 AWANSFLDD 458 (460)
T ss_pred HHHHHHHHh
Confidence 999998863
No 73
>PF03423 CBM_25: Carbohydrate binding domain (family 25); InterPro: IPR005085 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity. A few exceptions are CBMs in cellulosomal scaffolding proteins and rare instances of independent putative CBMs. The requirement of CBMs existing as modules within larger enzymes sets this class of carbohydrate-binding protein apart from other non-catalytic sugar binding proteins such as lectins and sugar transport proteins. CBMs were previously classified as cellulose-binding domains (CBDs) based on the initial discovery of several modules that bound cellulose [, ]. However, additional modules in carbohydrate-active enzymes are continually being found that bind carbohydrates other than cellulose yet otherwise meet the CBM criteria, hence the need to reclassify these polypeptides using more inclusive terminology. Previous classification of cellulose-binding domains were based on amino acid similarity. Groupings of CBDs were called "Types" and numbered with roman numerals (e.g. Type I or Type II CBDs). In keeping with the glycoside hydrolase classification, these groupings are now called families and numbered with Arabic numerals. Families 1 to 13 are the same as Types I to XIII. For a detailed review on the structure and binding modes of CBMs see []. This entry represents CBM25 from CAZY which has a starch-binding function as has been demonstrated in one case.; PDB: 2LAB_A 2C3X_B 2C3V_A 2C3W_C 2LAA_A.
Probab=99.92 E-value=2.9e-25 Score=207.66 Aligned_cols=87 Identities=34% Similarity=0.704 Sum_probs=61.3
Q ss_pred CcEEEEEEeCCCCCCCCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecCCCCCCcccc
Q 046057 450 EDLVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAIVYD 529 (1198)
Q Consensus 450 G~~V~v~YN~~~g~L~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~~~~~~~~wD 529 (1198)
|++||||||++.++|+|+++||||+|||+|++..++.|.++.... .++||++||+||.+|++|||||+||. ++||
T Consensus 1 G~~vtVyYn~~~~~l~g~~~v~~~~G~n~W~~~~~~~m~~~~~~~-~~~~~~~tv~vP~~a~~~dfvF~dg~----~~wD 75 (87)
T PF03423_consen 1 GETVTVYYNPSLTALSGAPNVHLHGGFNRWTHVPGFGMTKMCVPD-EGGWWKATVDVPEDAYVMDFVFNDGA----GNWD 75 (87)
T ss_dssp -SEEEEEE---E-SSS-S-EEEEEETTS-B-SSS-EE-EEESS----TTEEEEEEE--TTTSEEEEEEE-SS----S-EE
T ss_pred CCEEEEEEEeCCCCCCCCCcEEEEecCCCCCcCCCCCcceeeeee-cCCEEEEEEEEcCCceEEEEEEcCCC----CcEe
Confidence 899999999999999999999999999999998876555444333 37899999999999999999999996 8999
Q ss_pred CCCCcceEEEec
Q 046057 530 NNSRQDFHAIVP 541 (1198)
Q Consensus 530 NN~g~dyh~~V~ 541 (1198)
||+|+|||++|+
T Consensus 76 NN~g~nY~~~V~ 87 (87)
T PF03423_consen 76 NNNGANYHFPVE 87 (87)
T ss_dssp STTTS-EEEES-
T ss_pred CCCCccEEEEcC
Confidence 999999999985
No 74
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.91 E-value=1.6e-22 Score=231.19 Aligned_cols=342 Identities=13% Similarity=0.025 Sum_probs=223.9
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
|||++++. ..||...++..|+++|+++||+|.+++..... ... .....|+++
T Consensus 2 ~~i~i~~~------g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~-~~~---------------------~~~~~g~~~ 53 (357)
T PRK00726 2 KKILLAGG------GTGGHVFPALALAEELKKRGWEVLYLGTARGM-EAR---------------------LVPKAGIEF 53 (357)
T ss_pred cEEEEEcC------cchHhhhHHHHHHHHHHhCCCEEEEEECCCch-hhh---------------------ccccCCCcE
Confidence 89998863 46888898999999999999999999864311 000 001135555
Q ss_pred EEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecC
Q 046057 790 YFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHN 869 (1198)
Q Consensus 790 ~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn 869 (1198)
+.++... ....+ ..+.......+......+.+++++ .+|||||+|.|.+++.+.+++... ++|+|++.|+
T Consensus 54 ~~~~~~~-~~~~~-~~~~l~~~~~~~~~~~~~~~~ik~--~~pDvv~~~~~~~~~~~~~~~~~~------~~p~v~~~~~ 123 (357)
T PRK00726 54 HFIPSGG-LRRKG-SLANLKAPFKLLKGVLQARKILKR--FKPDVVVGFGGYVSGPGGLAARLL------GIPLVIHEQN 123 (357)
T ss_pred EEEeccC-cCCCC-hHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECCCcchhHHHHHHHHc------CCCEEEEcCC
Confidence 5554321 00000 000000001111112233344443 489999999987776665554432 7899998886
Q ss_pred CchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHH
Q 046057 870 LEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKE 949 (1198)
Q Consensus 870 ~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~ 949 (1198)
.... ...+.....+|.+++.++... .. ....++++|+||+|.+.+.+..
T Consensus 124 ~~~~-~~~r~~~~~~d~ii~~~~~~~---~~-----~~~~~i~vi~n~v~~~~~~~~~---------------------- 172 (357)
T PRK00726 124 AVPG-LANKLLARFAKKVATAFPGAF---PE-----FFKPKAVVTGNPVREEILALAA---------------------- 172 (357)
T ss_pred CCcc-HHHHHHHHHhchheECchhhh---hc-----cCCCCEEEECCCCChHhhcccc----------------------
Confidence 4332 122335567999998887432 11 3457899999999987654310
Q ss_pred HHHHHhCCCCCCCcEEEEEecCCCccCHHH-HHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEc
Q 046057 950 ALQQKVGLRKSDLPLVGIITRLTHQKGIHL-IKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCL 1028 (1198)
Q Consensus 950 aLrq~lGL~~~d~plIg~VGRL~~qKGidl-IleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g 1028 (1198)
.+++++++ ++.++|+++|+....|++.. +++|+..+......++++|.++ .+.+.+..+ +++ +|.|++
T Consensus 173 -~~~~~~~~-~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~----~~~~~~~~~-~~~----~v~~~g 241 (357)
T PRK00726 173 -PPARLAGR-EGKPTLLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD----LEEVRAAYA-AGI----NAEVVP 241 (357)
T ss_pred -hhhhccCC-CCCeEEEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc----HHHHHHHhh-cCC----cEEEee
Confidence 11245554 36678899999988888654 4499888754334566788874 244444444 554 388887
Q ss_pred cCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccc--------ccccccccchhhhhccCCCCcEE
Q 046057 1029 TYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLY--------DTVFDVDHDKERAQALDLEPNGF 1100 (1198)
Q Consensus 1029 ~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~--------E~V~d~d~~~~~~~~~~~~~nG~ 1100 (1198)
.. +.+..+|+.||+++++|- +.+++|||++|+|+|++..+|.. +.+.+. .+|+
T Consensus 242 ~~--~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-------------~~g~ 302 (357)
T PRK00726 242 FI--DDMAAAYAAADLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-------------GAAL 302 (357)
T ss_pred hH--hhHHHHHHhCCEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-------------CCEE
Confidence 76 346899999999999873 68999999999999998775432 344443 6899
Q ss_pred EEcCCC--HHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHH--
Q 046057 1101 SFDGAD--IAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVM-- 1176 (1198)
Q Consensus 1101 lf~~~D--~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am-- 1176 (1198)
++++.| +++|+ ++|..+.++++.+++|++++.
T Consensus 303 ~~~~~~~~~~~l~--------------------------------------------~~i~~ll~~~~~~~~~~~~~~~~ 338 (357)
T PRK00726 303 LIPQSDLTPEKLA--------------------------------------------EKLLELLSDPERLEAMAEAARAL 338 (357)
T ss_pred EEEcccCCHHHHH--------------------------------------------HHHHHHHcCHHHHHHHHHHHHhc
Confidence 999887 88888 445556678898889988883
Q ss_pred HhcCChHHHHHHHHHHHH
Q 046057 1177 EQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1177 ~qdfSW~~~A~~yielY~ 1194 (1198)
...++-+++++.+.++.+
T Consensus 339 ~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 339 GKPDAAERLADLIEELAR 356 (357)
T ss_pred CCcCHHHHHHHHHHHHhh
Confidence 456888888888877654
No 75
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.91 E-value=1.3e-22 Score=241.43 Aligned_cols=259 Identities=16% Similarity=0.166 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---------hhHHHHHHhccCE
Q 046057 816 FFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG---------THHIGKAMTYADK 886 (1198)
Q Consensus 816 ~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~---------~~li~~~~~~AD~ 886 (1198)
.|+.++.+.. ..-|+|.+||.+-.++|.+++... ...++.|..|..... +.-+-.+|..||.
T Consensus 116 ~fA~~i~~~~----~~~d~vwvhDYhl~l~p~~lr~~~-----~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dl 186 (456)
T TIGR02400 116 LFAEALAPLL----QPGDIVWVHDYHLMLLPAMLRELG-----VQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDL 186 (456)
T ss_pred HHHHHHHHhC----CCCCEEEEecchhhHHHHHHHhhC-----CCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCE
Confidence 3444444443 245899999999999999998764 368999999977543 3445568889999
Q ss_pred EEEeCHHHHHHHhCC-----C--------CCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHH
Q 046057 887 ATTVSHTYSKEVAGD-----P--------AIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQ 953 (1198)
Q Consensus 887 VitVS~~~a~el~~~-----~--------~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq 953 (1198)
|..-++.+++.+... + .+..+..++.+||||||++.|.|.... +........+++
T Consensus 187 igF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~------------~~~~~~~~~lr~ 254 (456)
T TIGR02400 187 VGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK------------PSVQKRIAELRE 254 (456)
T ss_pred EEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC------------hhHHHHHHHHHH
Confidence 999999998877541 0 112345678899999999988653110 011112234666
Q ss_pred HhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC--C----cEEEEEec-----CCC-hhhHHHHHHHHHHhCCCC-
Q 046057 954 KVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR--G----GQVVLLGS-----APD-PRIQNDFVNLANELHSSH- 1020 (1198)
Q Consensus 954 ~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~--~----~qLVIvGs-----gpd-p~i~~~L~~la~eLgl~~- 1020 (1198)
+++ +.++|+++|||++.||++.+++|+.++++. + +.|+++|. +++ ..+++.+++++.+++..+
T Consensus 255 ~~~----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~ 330 (456)
T TIGR02400 255 SLK----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFG 330 (456)
T ss_pred HcC----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccC
Confidence 663 678999999999999999999999998743 2 45777753 211 113333444433333211
Q ss_pred ----CCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCc----EEEeCCccccccccccccchhhhhc
Q 046057 1021 ----ADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSI----PVVRKTGGLYDTVFDVDHDKERAQA 1092 (1198)
Q Consensus 1021 ----~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~P----vIvt~tGGl~E~V~d~d~~~~~~~~ 1092 (1198)
...+.+.+.++.+++..+|++||++|+||..|+|||+++|||+||+| +|+|+.+|..+.+.
T Consensus 331 ~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~----------- 399 (456)
T TIGR02400 331 TLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN----------- 399 (456)
T ss_pred CCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC-----------
Confidence 12233344678899999999999999999999999999999999999 99999999888773
Q ss_pred cCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1093 LDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1093 ~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
+|++++|.|++++++||.
T Consensus 400 -----~gllVnP~d~~~lA~aI~ 417 (456)
T TIGR02400 400 -----GALLVNPYDIDGMADAIA 417 (456)
T ss_pred -----CcEEECCCCHHHHHHHHH
Confidence 399999999999998888
No 76
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.90 E-value=1.9e-21 Score=220.33 Aligned_cols=300 Identities=14% Similarity=0.063 Sum_probs=195.3
Q ss_pred CCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCCCCcccccc
Q 046057 724 KVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGC 803 (1198)
Q Consensus 724 kvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~~~f~rg~ 803 (1198)
.+||..+++..|+++|.++||+|.|++..... ... .....|++++.+.... +....
T Consensus 8 ~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~-~~~---------------------~~~~~~~~~~~~~~~~-~~~~~- 63 (350)
T cd03785 8 GTGGHIFPALALAEELRERGAEVLFLGTKRGL-EAR---------------------LVPKAGIPLHTIPVGG-LRRKG- 63 (350)
T ss_pred CchhhhhHHHHHHHHHHhCCCEEEEEECCCcc-hhh---------------------cccccCCceEEEEecC-cCCCC-
Confidence 46899999999999999999999999865321 000 0001244455443210 00000
Q ss_pred ccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhhHHHHHHhc
Q 046057 804 VYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTY 883 (1198)
Q Consensus 804 iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~li~~~~~~ 883 (1198)
.+........+......+..++++ .+|||||+|.+..++.+.++...+ ++|+|++.|+.... ..-+.....
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~i~~--~~pDvI~~~~~~~~~~~~~~a~~~------~~p~v~~~~~~~~~-~~~~~~~~~ 134 (350)
T cd03785 64 SLKKLKAPFKLLKGVLQARKILKK--FKPDVVVGFGGYVSGPVGLAAKLL------GIPLVIHEQNAVPG-LANRLLARF 134 (350)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECCCCcchHHHHHHHHh------CCCEEEEcCCCCcc-HHHHHHHHh
Confidence 000000000111122234444444 489999999876655554444433 78999877765432 122333456
Q ss_pred cCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCc
Q 046057 884 ADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLP 963 (1198)
Q Consensus 884 AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~p 963 (1198)
+|.++++|+...+. ....++.+|+||+|.+.+.+. .. +++++++ ++.+
T Consensus 135 ~~~vi~~s~~~~~~--------~~~~~~~~i~n~v~~~~~~~~----------------------~~-~~~~~~~-~~~~ 182 (350)
T cd03785 135 ADRVALSFPETAKY--------FPKDKAVVTGNPVREEILALD----------------------RE-RARLGLR-PGKP 182 (350)
T ss_pred hCEEEEcchhhhhc--------CCCCcEEEECCCCchHHhhhh----------------------hh-HHhcCCC-CCCe
Confidence 99999999987665 124689999999997765431 01 5677776 4677
Q ss_pred EEEEEecCCCccCHH-HHHHHHHHhhcCCcEEE-EEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHH
Q 046057 964 LVGIITRLTHQKGIH-LIKHAIWRTLDRGGQVV-LLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAG 1041 (1198)
Q Consensus 964 lIg~VGRL~~qKGid-lIleAl~~ll~~~~qLV-IvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ 1041 (1198)
+|+++|+....|+.. ++++|+..+.+.+++++ ++|.+ + .++++++++++ .++|+|.+.. ..+..+|+.
T Consensus 183 ~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g-~---~~~l~~~~~~~----~~~v~~~g~~--~~~~~~l~~ 252 (350)
T cd03785 183 TLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG-D---LEEVKKAYEEL----GVNYEVFPFI--DDMAAAYAA 252 (350)
T ss_pred EEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc-c---HHHHHHHHhcc----CCCeEEeehh--hhHHHHHHh
Confidence 888888877777765 55688888765566654 66776 2 46677777655 2679998876 446899999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccc--------cccccccccchhhhhccCCCCcEEEEcCC--CHHHHH
Q 046057 1042 ADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGL--------YDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVD 1111 (1198)
Q Consensus 1042 ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl--------~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La 1111 (1198)
||++|++|- +++++|||++|+|+|++..++. .+.+.+. .+|+++++. |+++|+
T Consensus 253 ad~~v~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~-------------g~g~~v~~~~~~~~~l~ 315 (350)
T cd03785 253 ADLVISRAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKA-------------GAAVLIPQEELTPERLA 315 (350)
T ss_pred cCEEEECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-------------CCEEEEecCCCCHHHHH
Confidence 999998772 6899999999999999876542 2444443 689999987 899998
Q ss_pred HHHh
Q 046057 1112 YALN 1115 (1198)
Q Consensus 1112 ~AL~ 1115 (1198)
++|.
T Consensus 316 ~~i~ 319 (350)
T cd03785 316 AALL 319 (350)
T ss_pred HHHH
Confidence 5555
No 77
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.89 E-value=2.3e-21 Score=219.40 Aligned_cols=306 Identities=17% Similarity=0.100 Sum_probs=190.7
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
|||++++. .+||-......|+++|.++||+|.++++.+.... .+ ....|+++
T Consensus 1 ~~i~~~~g------~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~-----~~-----------------~~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAG------GTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEK-----RL-----------------VPKAGIEF 52 (348)
T ss_pred CeEEEEeC------ccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchh-----cc-----------------cccCCCce
Confidence 78998864 2344444456899999999999999986422100 00 01134555
Q ss_pred EEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecC
Q 046057 790 YFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHN 869 (1198)
Q Consensus 790 ~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn 869 (1198)
+.+... .+. .............+......+.+++++ .+|||||+|.+..++.+.++.... ++|+|++.|+
T Consensus 53 ~~i~~~-~~~-~~~~~~~l~~~~~~~~~~~~l~~~i~~--~~pDvVi~~~~~~~~~~~~~~~~~------~~p~v~~~~~ 122 (348)
T TIGR01133 53 YFIPVG-GLR-RKGSFRLIKTPLKLLKAVFQARRILKK--FKPDAVIGFGGYVSGPAGLAAKLL------GIPLFHHEQN 122 (348)
T ss_pred EEEecc-CcC-CCChHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEcCCcccHHHHHHHHHc------CCCEEEECCC
Confidence 554321 110 000000000001111122334444544 589999999876655555444332 6788866554
Q ss_pred CchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHH
Q 046057 870 LEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKE 949 (1198)
Q Consensus 870 ~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~ 949 (1198)
.... ...+.....+|.++++|+...+.+ +..+|+||+|...+.+..
T Consensus 123 ~~~~-~~~~~~~~~~d~ii~~~~~~~~~~-----------~~~~i~n~v~~~~~~~~~---------------------- 168 (348)
T TIGR01133 123 AVPG-LTNKLLSRFAKKVLISFPGAKDHF-----------EAVLVGNPVRQEIRSLPV---------------------- 168 (348)
T ss_pred CCcc-HHHHHHHHHhCeeEECchhHhhcC-----------CceEEcCCcCHHHhcccc----------------------
Confidence 3332 122445567999999999776554 237899999876554310
Q ss_pred HHHHHhCCCCCCCcEEEEEecCCCccCHH-HHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEc
Q 046057 950 ALQQKVGLRKSDLPLVGIITRLTHQKGIH-LIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCL 1028 (1198)
Q Consensus 950 aLrq~lGL~~~d~plIg~VGRL~~qKGid-lIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g 1028 (1198)
.+++++++ ++.++|+++|+....|++. ++++|+..+.+.++++++++++.+ .+.+++.++++++. +.+.|.
T Consensus 169 -~~~~~~~~-~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~---~~~l~~~~~~~~l~--~~v~~~- 240 (348)
T TIGR01133 169 -PRERFGLR-EGKPTILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND---LEKVKNVYQELGIE--AIVTFI- 240 (348)
T ss_pred -hhhhcCCC-CCCeEEEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch---HHHHHHHHhhCCce--EEecCc-
Confidence 02356776 4678899999988888865 456888888666677755443212 35777777777752 344443
Q ss_pred cCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccc-------cccccccccchhhhhccCCCCcEEE
Q 046057 1029 TYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGL-------YDTVFDVDHDKERAQALDLEPNGFS 1101 (1198)
Q Consensus 1029 ~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl-------~E~V~d~d~~~~~~~~~~~~~nG~l 1101 (1198)
.. .+..+|+.||++|.+| .|.+++|||++|+|+|++..+|. .+++.+. .+|++
T Consensus 241 --~~-~~~~~l~~ad~~v~~~----g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-------------~~G~~ 300 (348)
T TIGR01133 241 --DE-NMAAAYAAADLVISRA----GASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-------------GAGLV 300 (348)
T ss_pred --cc-CHHHHHHhCCEEEECC----ChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-------------CCEEE
Confidence 22 4689999999999876 26899999999999999877542 2355544 78999
Q ss_pred EcCCC--HHHHHHHHh
Q 046057 1102 FDGAD--IAGVDYALN 1115 (1198)
Q Consensus 1102 f~~~D--~~~La~AL~ 1115 (1198)
+++.| +++|+++|.
T Consensus 301 ~~~~~~~~~~l~~~i~ 316 (348)
T TIGR01133 301 IRQKELLPEKLLEALL 316 (348)
T ss_pred EecccCCHHHHHHHHH
Confidence 98876 999985555
No 78
>PF03423 CBM_25: Carbohydrate binding domain (family 25); InterPro: IPR005085 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity. A few exceptions are CBMs in cellulosomal scaffolding proteins and rare instances of independent putative CBMs. The requirement of CBMs existing as modules within larger enzymes sets this class of carbohydrate-binding protein apart from other non-catalytic sugar binding proteins such as lectins and sugar transport proteins. CBMs were previously classified as cellulose-binding domains (CBDs) based on the initial discovery of several modules that bound cellulose [, ]. However, additional modules in carbohydrate-active enzymes are continually being found that bind carbohydrates other than cellulose yet otherwise meet the CBM criteria, hence the need to reclassify these polypeptides using more inclusive terminology. Previous classification of cellulose-binding domains were based on amino acid similarity. Groupings of CBDs were called "Types" and numbered with roman numerals (e.g. Type I or Type II CBDs). In keeping with the glycoside hydrolase classification, these groupings are now called families and numbered with Arabic numerals. Families 1 to 13 are the same as Types I to XIII. For a detailed review on the structure and binding modes of CBMs see []. This entry represents CBM25 from CAZY which has a starch-binding function as has been demonstrated in one case.; PDB: 2LAB_A 2C3X_B 2C3V_A 2C3W_C 2LAA_A.
Probab=99.89 E-value=2.1e-23 Score=195.13 Aligned_cols=85 Identities=34% Similarity=0.750 Sum_probs=60.3
Q ss_pred CCeEEEEEcccCCCCCCCCcEEEEeecCCccccccceeccccc--CCCCeEEEEEEecCCceeEeEEEEcCCcccccCCC
Q 046057 275 DQDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTH--LKGDWWSCQVHVPKEAFKIDFVFFNGQNIYENNDQ 352 (1198)
Q Consensus 275 G~~v~v~yN~~l~~L~~~~~v~ih~GfN~W~~~~~~~~~~~t~--~~~dWw~~~v~VP~~A~~lnFvF~dg~~~wDNN~g 352 (1198)
|++|+||||+++.+|++++.|+||+|||+|..... ..|.+.. ..++||+|+|+||.+|++|||||+||+++||||+|
T Consensus 1 G~~vtVyYn~~~~~l~g~~~v~~~~G~n~W~~~~~-~~m~~~~~~~~~~~~~~tv~vP~~a~~~dfvF~dg~~~wDNN~g 79 (87)
T PF03423_consen 1 GETVTVYYNPSLTALSGAPNVHLHGGFNRWTHVPG-FGMTKMCVPDEGGWWKATVDVPEDAYVMDFVFNDGAGNWDNNNG 79 (87)
T ss_dssp -SEEEEEE---E-SSS-S-EEEEEETTS-B-SSS--EE-EEESS---TTEEEEEEE--TTTSEEEEEEE-SSS-EESTTT
T ss_pred CCEEEEEEEeCCCCCCCCCcEEEEecCCCCCcCCC-CCcceeeeeecCCEEEEEEEEcCCceEEEEEEcCCCCcEeCCCC
Confidence 79999999999999999999999999999998854 3333332 34789999999999999999999999999999999
Q ss_pred CceEEEEc
Q 046057 353 KDFCIAVE 360 (1198)
Q Consensus 353 ~d~~~~V~ 360 (1198)
+||+++|+
T Consensus 80 ~nY~~~V~ 87 (87)
T PF03423_consen 80 ANYHFPVE 87 (87)
T ss_dssp S-EEEES-
T ss_pred ccEEEEcC
Confidence 99999985
No 79
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.88 E-value=1.1e-20 Score=218.39 Aligned_cols=360 Identities=13% Similarity=0.081 Sum_probs=223.3
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccc-c--ccccccCCCceeEEeecee
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDL-G--YNRSYHWGGTEIKVWFGKV 784 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l-~--~~~~~~~g~~~i~V~~~~~ 784 (1198)
..|||++++..+ .+|-...+.+|+.+|+++||+|.++++.+.... ..+..+ . +...+..... +|....
T Consensus 3 ~~~rili~t~~~-----G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~-~~~~~~~~~~y~~~~~~~~~---~~~~~~ 73 (380)
T PRK13609 3 KNPKVLILTAHY-----GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESH-PVITEITKYLYLKSYTIGKE---LYRLFY 73 (380)
T ss_pred CCCeEEEEEcCC-----CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcc-hHHHHHHHHHHHHHHHHhHH---HHHHHH
Confidence 578999999755 349999999999999999999888877643221 000000 0 0000000000 000000
Q ss_pred cCeEEEEeCCCCCccccccccCCCCchhhHHHH----HHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCC
Q 046057 785 EGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFF----CHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSK 860 (1198)
Q Consensus 785 ~Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F----~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ 860 (1198)
.+ .. ..++ ...+.++ ...+.+++++ .+||+||||....+ ++.+.+.. + .+
T Consensus 74 ~~-----~~---------~~~~----~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~-~~~~~~~~----~-~~ 127 (380)
T PRK13609 74 YG-----VE---------KIYD----KKIFSWYANFGRKRLKLLLQA--EKPDIVINTFPIIA-VPELKKQT----G-IS 127 (380)
T ss_pred hc-----cC---------cccc----hHHHHHHHHHHHHHHHHHHHH--hCcCEEEEcChHHH-HHHHHHhc----C-CC
Confidence 00 00 0000 0011111 2455666665 58999999854332 22222211 2 36
Q ss_pred CeEEEEecCCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchh
Q 046057 861 ARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENL 940 (1198)
Q Consensus 861 ipvV~tIHn~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~ 940 (1198)
+|++.++++...... +....+|.++++|+...+.+...+ ....++.++.|.++.. |.+.
T Consensus 128 ip~~~~~td~~~~~~---~~~~~ad~i~~~s~~~~~~l~~~g---i~~~ki~v~G~p~~~~-f~~~-------------- 186 (380)
T PRK13609 128 IPTYNVLTDFCLHKI---WVHREVDRYFVATDHVKKVLVDIG---VPPEQVVETGIPIRSS-FELK-------------- 186 (380)
T ss_pred CCeEEEeCCCCCCcc---cccCCCCEEEECCHHHHHHHHHcC---CChhHEEEECcccChH-HcCc--------------
Confidence 898877765432222 234689999999999999887533 3456777664444321 2110
Q ss_pred hhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCC
Q 046057 941 VEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSH 1020 (1198)
Q Consensus 941 ~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~ 1020 (1198)
..+..+++++|++++...++++.|++...|++..+++++... ++++++++|+. +....+.++++++++
T Consensus 187 -----~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~-~~~~~~~l~~~~~~~---- 254 (380)
T PRK13609 187 -----INPDIIYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGK-NEALKQSLEDLQETN---- 254 (380)
T ss_pred -----CCHHHHHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCC-CHHHHHHHHHHHhcC----
Confidence 012346788999843344566678898899999999988643 57899887643 333556777776643
Q ss_pred CCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeC-CccccccccccccchhhhhccCCCCcE
Q 046057 1021 ADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRK-TGGLYDTVFDVDHDKERAQALDLEPNG 1099 (1198)
Q Consensus 1021 ~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~-tGGl~E~V~d~d~~~~~~~~~~~~~nG 1099 (1198)
+++|+|+|..++ +..+|+.||+++. ++.|++++|||++|+|+|+++ .+|........ ...+|
T Consensus 255 ~~~v~~~g~~~~--~~~l~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~-----------~~~~G 317 (380)
T PRK13609 255 PDALKVFGYVEN--IDELFRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMY-----------FERKG 317 (380)
T ss_pred CCcEEEEechhh--HHHHHHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHH-----------HHhCC
Confidence 357999877653 6799999999884 567999999999999999975 55532110000 01346
Q ss_pred EEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HH
Q 046057 1100 FSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--ME 1177 (1198)
Q Consensus 1100 ~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~ 1177 (1198)
+.+...|+++|+++|. .+.++++.+.+|++++ +.
T Consensus 318 ~~~~~~~~~~l~~~i~--------------------------------------------~ll~~~~~~~~m~~~~~~~~ 353 (380)
T PRK13609 318 AAVVIRDDEEVFAKTE--------------------------------------------ALLQDDMKLLQMKEAMKSLY 353 (380)
T ss_pred cEEEECCHHHHHHHHH--------------------------------------------HHHCCHHHHHHHHHHHHHhC
Confidence 6666778999885544 5557888888888777 34
Q ss_pred hcCChHHHHHHHHHHHHHH
Q 046057 1178 QDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1178 qdfSW~~~A~~yielY~~a 1196 (1198)
..++++++++.+++++...
T Consensus 354 ~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 354 LPEPADHIVDDILAENHVE 372 (380)
T ss_pred CCchHHHHHHHHHHhhhhh
Confidence 5689999999999988753
No 80
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.87 E-value=1.3e-20 Score=237.15 Aligned_cols=299 Identities=15% Similarity=0.119 Sum_probs=210.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---------hhHHHHHHhccCE
Q 046057 816 FFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG---------THHIGKAMTYADK 886 (1198)
Q Consensus 816 ~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~---------~~li~~~~~~AD~ 886 (1198)
.|+.++.+.+. .-|+|..||.+..++|.+++... .+.++.|..|..... +.-+-.+|..||.
T Consensus 136 ~FA~~i~~~~~----~~d~vWvhDYhL~llp~~lR~~~-----~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDl 206 (797)
T PLN03063 136 MFLDVVKENYE----EGDVVWCHDYHLMFLPQYLKEYN-----NKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADL 206 (797)
T ss_pred HHHHHHHHhcC----CCCEEEEecchhhhHHHHHHHhC-----CCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCE
Confidence 34444444442 34899999999999999998764 478999999998654 3344568889999
Q ss_pred EEEeCHHHHHHHhCC-----C--------CCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHH
Q 046057 887 ATTVSHTYSKEVAGD-----P--------AIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQ 953 (1198)
Q Consensus 887 VitVS~~~a~el~~~-----~--------~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq 953 (1198)
|-+.+..|++.+... + .+.....++.+||||||++.|.+.... +........+++
T Consensus 207 igF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~------------~~~~~~~~~lr~ 274 (797)
T PLN03063 207 IGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCEL------------PEVKQHMKELKR 274 (797)
T ss_pred EEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcC------------hhHHHHHHHHHH
Confidence 999999998877641 0 011233568899999998877542110 011112234555
Q ss_pred HhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC--Cc----EEEEEecCC--ChhhHHHHHHHHHHhC----CCCC
Q 046057 954 KVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR--GG----QVVLLGSAP--DPRIQNDFVNLANELH----SSHA 1021 (1198)
Q Consensus 954 ~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~--~~----qLVIvGsgp--dp~i~~~L~~la~eLg----l~~~ 1021 (1198)
.++ +.++|+++|||++.||+..+++|+.++++. ++ .||+++... +....+.+++.++++. ..+.
T Consensus 275 ~~~----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g 350 (797)
T PLN03063 275 FFA----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFG 350 (797)
T ss_pred hcC----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccc
Confidence 553 567999999999999999999999998753 33 334333211 1112234555555443 1111
Q ss_pred ----CcEEEE-ccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCc----EEEeCCccccccccccccchhhhhc
Q 046057 1022 ----DRARLC-LTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSI----PVVRKTGGLYDTVFDVDHDKERAQA 1092 (1198)
Q Consensus 1022 ----drV~f~-g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~P----vIvt~tGGl~E~V~d~d~~~~~~~~ 1092 (1198)
.-|+++ +.++.+++..+|+.||++|+||.+|++||+.+|||+||+| +|+|..+|..+.+.
T Consensus 351 ~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l~----------- 419 (797)
T PLN03063 351 SVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSLG----------- 419 (797)
T ss_pred cCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhhc-----------
Confidence 113333 3568889999999999999999999999999999999999 99999999999763
Q ss_pred cCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHH
Q 046057 1093 LDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLC 1172 (1198)
Q Consensus 1093 ~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~ 1172 (1198)
.+|++++|.|+++++++|. +++.+ +++.++.+.
T Consensus 420 ----~~allVnP~D~~~lA~AI~----------------------------------------~aL~m---~~~er~~r~ 452 (797)
T PLN03063 420 ----AGALLVNPWNITEVSSAIK----------------------------------------EALNM---SDEERETRH 452 (797)
T ss_pred ----CCeEEECCCCHHHHHHHHH----------------------------------------HHHhC---CHHHHHHHH
Confidence 4599999999999999888 66653 233323332
Q ss_pred HHH--HHhcCChHHHHHHHHHHHHHHh
Q 046057 1173 KTV--MEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1173 ~~a--m~qdfSW~~~A~~yielY~~a~ 1197 (1198)
++. ....++|...++.+++.|.++.
T Consensus 453 ~~~~~~v~~~~~~~Wa~~fl~~l~~~~ 479 (797)
T PLN03063 453 RHNFQYVKTHSAQKWADDFMSELNDII 479 (797)
T ss_pred HHHHHhhhhCCHHHHHHHHHHHHHHHh
Confidence 222 2356899999999999887764
No 81
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.87 E-value=3.5e-20 Score=217.54 Aligned_cols=283 Identities=13% Similarity=0.038 Sum_probs=191.2
Q ss_pred HHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCch--------hhhHHHHHHhccCEEEEeCH
Q 046057 821 ALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEF--------GTHHIGKAMTYADKATTVSH 892 (1198)
Q Consensus 821 ale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~--------~~~li~~~~~~AD~VitVS~ 892 (1198)
+.++++. .+||+||+|..... +.++.... ..++|+|++.|.+.. ...+++..+..+|.++++|+
T Consensus 116 ~~~~l~~--~~Pd~v~~~~~~~~--~~~l~~~~----~~~ip~vl~~~~~~~~s~~~~~~~~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 116 VRRFLRF--WRPKLVIIMETELW--PNLIAELK----RRGIPLVLANARLSERSFKRYQKFKRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHh--hCCCEEEEEecchh--HHHHHHHH----HCCCCEEEEeccCChhhHHHHHHHHHHHHHHHHhCCEEEECCH
Confidence 4555655 48999999853221 21222111 127899887665421 12345567788999999999
Q ss_pred HHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCC
Q 046057 893 TYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLT 972 (1198)
Q Consensus 893 ~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~ 972 (1198)
..++.+...+ .... +.+++|+ +.+.+.+. .....+..++++++ + +.++++++|+
T Consensus 188 ~~~~~l~~~g---~~~~-i~vi~n~-~~d~~~~~----------------~~~~~~~~~r~~~~-~--~~~vil~~~~-- 241 (425)
T PRK05749 188 EDAERFLALG---AKNE-VTVTGNL-KFDIEVPP----------------ELAARAATLRRQLA-P--NRPVWIAAST-- 241 (425)
T ss_pred HHHHHHHHcC---CCCC-cEecccc-cccCCCCh----------------hhHHHHHHHHHHhc-C--CCcEEEEeCC--
Confidence 9999987533 3334 7788774 33332210 11123456777776 3 5678888876
Q ss_pred CccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCC-----------CCcEEEEccCChHHHHHHH
Q 046057 973 HQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSH-----------ADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 973 ~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~-----------~drV~f~g~~d~~~l~~iy 1039 (1198)
+.|+.+.+++|+..+.+ ++++|+|+|.||+ -.+.++++++++|++. ..+|.+.+ ...++..+|
T Consensus 242 ~~~~~~~ll~A~~~l~~~~~~~~liivG~g~~--r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~--~~~el~~~y 317 (425)
T PRK05749 242 HEGEEELVLDAHRALLKQFPNLLLILVPRHPE--RFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGD--TMGELGLLY 317 (425)
T ss_pred CchHHHHHHHHHHHHHHhCCCcEEEEcCCChh--hHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEe--cHHHHHHHH
Confidence 46889999999998764 5899999999863 1257888888888741 01233322 234678999
Q ss_pred HHccEEEE-cCCCCCCcHHHHHHHHhCCcEEEeC-CccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhc
Q 046057 1040 AGADFILV-PSIFEPCGLTQLVAMRYGSIPVVRK-TGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSI 1117 (1198)
Q Consensus 1040 A~ADi~Lv-PS~~EpfGLt~LEAMa~G~PvIvt~-tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~ 1117 (1198)
+.||++++ +|..|++|++++|||+||+|+|++. +++..+++... ..+|+++.+.|+++|+++|.
T Consensus 318 ~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~------------~~~g~~~~~~d~~~La~~l~-- 383 (425)
T PRK05749 318 AIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL------------LQAGAAIQVEDAEDLAKAVT-- 383 (425)
T ss_pred HhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH------------HHCCCeEEECCHHHHHHHHH--
Confidence 99999666 6778999999999999999999865 46677766542 14588898999999995555
Q ss_pred ccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHh
Q 046057 1118 HVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~a~ 1197 (1198)
.+.++++.+.+|++++.+.--+....+++++++|.+.+
T Consensus 384 ------------------------------------------~ll~~~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l 421 (425)
T PRK05749 384 ------------------------------------------YLLTDPDARQAYGEAGVAFLKQNQGALQRTLQLLEPYL 421 (425)
T ss_pred ------------------------------------------HHhcCHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhc
Confidence 45578888888988883211122477788888877643
No 82
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.86 E-value=5.4e-20 Score=191.17 Aligned_cols=226 Identities=26% Similarity=0.367 Sum_probs=164.7
Q ss_pred EEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEE
Q 046057 712 IVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYF 791 (1198)
Q Consensus 712 IL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~ 791 (1198)
|++++..+.| ..||.++++..|+++|.++||+|+++.
T Consensus 1 i~~i~~~~~~--~~~G~~~~~~~l~~~L~~~g~~v~v~~----------------------------------------- 37 (229)
T cd01635 1 ILLVSTPLLP--GGGGVELVLLDLAKALARRGHEVEVVA----------------------------------------- 37 (229)
T ss_pred CeeeccccCC--CCCCchhHHHHHHHHHHHcCCeEEEEE-----------------------------------------
Confidence 5677777766 479999999999999999999999987
Q ss_pred eCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCc
Q 046057 792 LEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLE 871 (1198)
Q Consensus 792 l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~ 871 (1198)
. + ...+..++. ..+||+||+|++............ ..++|+++++|+..
T Consensus 38 ---~--~-------------------~~~~~~~~~--~~~~D~i~~~~~~~~~~~~~~~~~-----~~~~~~i~~~h~~~ 86 (229)
T cd01635 38 ---L--L-------------------LLLLLRILR--GFKPDVVHAHGYYPAPLALLLAAR-----LLGIPLVLTVHGVN 86 (229)
T ss_pred ---e--c-------------------hHHHHHHHh--hcCCCEEEEcCCCcHHHHHHHHHh-----hCCCCEEEEEcCcc
Confidence 0 0 011223333 258999999998776655422211 12789999999977
Q ss_pred hhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHH
Q 046057 872 FGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEAL 951 (1198)
Q Consensus 872 ~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aL 951 (1198)
......... .+. +..+
T Consensus 87 ~~~~~~~~~----------------~~~------------------------------------------------~~~~ 102 (229)
T cd01635 87 RSLLEGVPL----------------SLL------------------------------------------------ALSI 102 (229)
T ss_pred HhhcccCcH----------------HHH------------------------------------------------HHHH
Confidence 552211000 000 0000
Q ss_pred HHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC--CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEcc
Q 046057 952 QQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR--GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLT 1029 (1198)
Q Consensus 952 rq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~--~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~ 1029 (1198)
......++|++.+.||++.+++|+..+.+. +++|+++|.+++ .......+..++. .++|.+++.
T Consensus 103 ---------~~~~~~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~---~~~~~~~~~~~~~--~~~v~~~~~ 168 (229)
T cd01635 103 ---------GLADKVFVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE---REYLEELLAALLL--LDRVIFLGG 168 (229)
T ss_pred ---------hhcceEEEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC---hHHHHHHHHhcCC--cccEEEeCC
Confidence 000122899999999999999999999754 899999999854 2333333445554 578999999
Q ss_pred C-ChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEE
Q 046057 1030 Y-DEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSF 1102 (1198)
Q Consensus 1030 ~-d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf 1102 (1198)
+ +.+.+..++++||++++||..|++|++++|||++|+|+|+++.++..|++.+. .+|++|
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~-------------~~g~~~ 229 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDG-------------LTGLLV 229 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECC-------------CceEEC
Confidence 7 55667778888999999999999999999999999999999999999998876 788875
No 83
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.86 E-value=1.4e-20 Score=235.64 Aligned_cols=298 Identities=17% Similarity=0.217 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---------hhHHHHHHhccCE
Q 046057 816 FFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG---------THHIGKAMTYADK 886 (1198)
Q Consensus 816 ~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~---------~~li~~~~~~AD~ 886 (1198)
.|+.++.+.+ ..-|+|..||.+..++|.+++... ...++-|..|...+. +.-+-.+|..+|.
T Consensus 122 ~fA~~~~~~~----~~~d~vwvhDYhl~l~p~~lr~~~-----~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dl 192 (726)
T PRK14501 122 RFAEAIAAIA----RPGDVVWVHDYQLMLLPAMLRERL-----PDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADL 192 (726)
T ss_pred HHHHHHHHhc----CCCCEEEEeCchhhhHHHHHHhhC-----CCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCe
Confidence 3444444443 234899999999999999998764 478999999988664 2344467788999
Q ss_pred EEEeCHHHHHHHhCC-----C--------CCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHH
Q 046057 887 ATTVSHTYSKEVAGD-----P--------AIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQ 953 (1198)
Q Consensus 887 VitVS~~~a~el~~~-----~--------~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq 953 (1198)
+-.-+..+++.+... + .+..+..++.+||||||++.|.|.... .........+++
T Consensus 193 igf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~------------~~~~~~~~~lr~ 260 (726)
T PRK14501 193 IGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD------------PEVQEEIRRLRQ 260 (726)
T ss_pred EEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC------------chHHHHHHHHHH
Confidence 999999988776531 1 012233468889999999888653110 000112233555
Q ss_pred HhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC------CcEEEEEecCC--C-h---hhHHHHHHHHHHhCCCCC
Q 046057 954 KVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR------GGQVVLLGSAP--D-P---RIQNDFVNLANELHSSHA 1021 (1198)
Q Consensus 954 ~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~------~~qLVIvGsgp--d-p---~i~~~L~~la~eLgl~~~ 1021 (1198)
.+ .+.++|++||||++.||+..+++|+.++++. +++|+++|.+. + + .++..+.+++.+++..+.
T Consensus 261 ~~----~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~ 336 (726)
T PRK14501 261 DL----RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFG 336 (726)
T ss_pred Hc----CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcC
Confidence 54 2667999999999999999999999998753 26788887321 1 1 344555566655543221
Q ss_pred -----CcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHh-----CCcEEEeCCccccccccccccchhhhh
Q 046057 1022 -----DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRY-----GSIPVVRKTGGLYDTVFDVDHDKERAQ 1091 (1198)
Q Consensus 1022 -----drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~-----G~PvIvt~tGGl~E~V~d~d~~~~~~~ 1091 (1198)
..+.|.+.++.+++..+|+.||++|+||..|++||+.+|||+| |+|+++..+|+..+++
T Consensus 337 ~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----------- 405 (726)
T PRK14501 337 TVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----------- 405 (726)
T ss_pred CCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC-----------
Confidence 1345666789999999999999999999999999999999999 4466666778777664
Q ss_pred ccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHh-cCHHHHHH
Q 046057 1092 ALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYY-DGREWLNS 1170 (1198)
Q Consensus 1092 ~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~-~~~e~~~~ 1170 (1198)
+|++++|.|+++++++|. +++..-. +....+..
T Consensus 406 ------~~llv~P~d~~~la~ai~----------------------------------------~~l~~~~~e~~~r~~~ 439 (726)
T PRK14501 406 ------EALLVNPNDIEGIAAAIK----------------------------------------RALEMPEEEQRERMQA 439 (726)
T ss_pred ------cCeEECCCCHHHHHHHHH----------------------------------------HHHcCCHHHHHHHHHH
Confidence 289999999999998888 5554311 11122222
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHh
Q 046057 1171 LCKTVMEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1171 L~~~am~qdfSW~~~A~~yielY~~a~ 1197 (1198)
+.+. ...|||..++++|++.|+++.
T Consensus 440 ~~~~--v~~~~~~~w~~~~l~~l~~~~ 464 (726)
T PRK14501 440 MQER--LRRYDVHKWASDFLDELREAA 464 (726)
T ss_pred HHHH--HHhCCHHHHHHHHHHHHHHHH
Confidence 2333 247999999999999998763
No 84
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.84 E-value=2.6e-19 Score=210.58 Aligned_cols=396 Identities=17% Similarity=0.102 Sum_probs=255.1
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHh---------CCCeEEEEeeCCCCCcccccccccccccccCCCcee
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQD---------LNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEI 777 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~---------~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i 777 (1198)
.+.++++++.... ..||.++-+...+.++.. .||+|.+++..+..+..+- .+++......+...+
T Consensus 32 ~~~~~~~~~~~~~----~~gg~er~~v~~~~~l~s~~~~lg~~d~G~qV~~l~~h~~al~~~~--~~~~~~~~l~~~~~i 105 (495)
T KOG0853|consen 32 KPFEHVTFIHPDL----GIGGAERLVVDAAVHLLSGQDVLGLPDTGGQVVYLTSHEDALEMPL--LLRCFAETLDGTPPI 105 (495)
T ss_pred ccchhheeecccc----ccCchHHHhHHHHHHHHhcccccCCCCCCceEEEEehhhhhhcchH--HHHHHHHHhcCCCce
Confidence 4568999987544 679999999999999999 9999999997655431000 001100000010111
Q ss_pred EEee--------------ceecCeEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChh
Q 046057 778 KVWF--------------GKVEGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSA 843 (1198)
Q Consensus 778 ~V~~--------------~~~~Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta 843 (1198)
.++. ..-.++.+..+.....+.+....+ --...|...|..+++++ .. ||++|-|-|.+.
T Consensus 106 ~vv~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~~~~d---~~i~d~~~~~~~l~~~~---~~-p~~~~~i~~~~h 178 (495)
T KOG0853|consen 106 LVVGDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWAEKVD---PIIEDFVSACVPLLKQL---SG-PDVIIKIYFYCH 178 (495)
T ss_pred EEEEeecCcccchhhhhhhccceeEEEEeccchhhhhhhhhc---eeecchHHHHHHHHHHh---cC-CcccceeEEecc
Confidence 1110 001233333333210000000000 00122333333333333 33 999998887777
Q ss_pred HHHHHHHHhhhhcCCCCCeEEEEecCCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCC
Q 046057 844 PVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMW 923 (1198)
Q Consensus 844 ~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~ 923 (1198)
+...++.... +++-+++-|-+... .......++++++.|...+..+.. .....+..++.+.+.+||.+.+
T Consensus 179 ~~~~lla~r~------g~~~~l~~~~l~~~---e~e~~~~~~~~~~ns~~~~~~f~~-~~~~L~~~d~~~~y~ei~~s~~ 248 (495)
T KOG0853|consen 179 FPDSLLAKRL------GVLKVLYRHALDKI---EEETTGLAWKILVNSYFTKRQFKA-TFVSLSNSDITSTYPEIDGSWF 248 (495)
T ss_pred chHHHhcccc------Cccceeehhhhhhh---hhhhhhccceEecchhhhhhhhhh-hhhhcCCCCcceeeccccchhc
Confidence 7776666543 56777777765532 112334578888888777766653 2233344458899999998776
Q ss_pred CCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC-------CcEEEE
Q 046057 924 DPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR-------GGQVVL 996 (1198)
Q Consensus 924 ~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~-------~~qLVI 996 (1198)
.|. .|.. +...+...|...+.. ....++..+.|+.+.||++++++|+..+... ..++++
T Consensus 249 ~~~-------~~~~------~~~~~~~~r~~~~v~-~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~ 314 (495)
T KOG0853|consen 249 TYG-------QYES------HLELRLPVRLYRGVS-GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVV 314 (495)
T ss_pred ccc-------cccc------chhcccccceeeeec-ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEE
Confidence 651 1111 111122223334444 2356889999999999999999999888642 357788
Q ss_pred EecC-CC------hhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEE
Q 046057 997 LGSA-PD------PRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPV 1069 (1198)
Q Consensus 997 vGsg-pd------p~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvI 1069 (1198)
+|+. .+ ..+...+.++++++++. .+.|.|+...+....-.+++.+.+.+...-.|+||+|++|||+||+|+|
T Consensus 315 ~g~~G~d~~~sen~~~~~el~~lie~~~l~-g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvv 393 (495)
T KOG0853|consen 315 AGSRGYDERDSENVEYLKELLSLIEEYDLL-GQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVV 393 (495)
T ss_pred ecCCCccccchhhHHHHHHHHHHHHHhCcc-CceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEE
Confidence 8831 12 23567789999999883 5778887777776667777888887776667999999999999999999
Q ss_pred EeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccc
Q 046057 1070 VRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSS 1149 (1198)
Q Consensus 1070 vt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1149 (1198)
+++.||+.|+|.++ .|||++++ +.++.+ .+.
T Consensus 394 At~~GGP~EiV~~~-------------~tG~l~dp-~~e~~~-~~a---------------------------------- 424 (495)
T KOG0853|consen 394 ATNNGGPAEIVVHG-------------VTGLLIDP-GQEAVA-ELA---------------------------------- 424 (495)
T ss_pred EecCCCceEEEEcC-------------CcceeeCC-chHHHH-HHH----------------------------------
Confidence 99999999999998 89999999 555321 122
Q ss_pred cchhHHHHHHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHHHHHHHH
Q 046057 1150 MTYDSFRAISAYYDGREWLNSLCKTV---MEQDWSWNRPALDYMELYRA 1195 (1198)
Q Consensus 1150 ~~~~~~rAI~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~yielY~~ 1195 (1198)
.++..+..+++.|.++++++ +.+.|||.....+...+..+
T Consensus 425 ------~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~ 467 (495)
T KOG0853|consen 425 ------DALLKLRRDPELWARMGKNGLKRVKEMFSWQHYSERIASVLGK 467 (495)
T ss_pred ------HHHHHHhcCHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHh
Confidence 56666778999999999999 55679999998888877654
No 85
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.83 E-value=1.9e-19 Score=184.14 Aligned_cols=149 Identities=26% Similarity=0.372 Sum_probs=129.8
Q ss_pred HHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhh---cCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcE
Q 046057 948 KEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTL---DRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRA 1024 (1198)
Q Consensus 948 k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll---~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV 1024 (1198)
|..+++..+.+ .+.++|+++||+.+.||++.+++|+..+. ..+++|+|+|.++ ....+..+++.+++ .+++
T Consensus 2 ~~~~~~~~~~~-~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~---~~~~~~~~~~~~~~--~~~i 75 (172)
T PF00534_consen 2 KDKLREKLKIP-DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE---YKKELKNLIEKLNL--KENI 75 (172)
T ss_dssp HHHHHHHTTT--TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC---HHHHHHHHHHHTTC--GTTE
T ss_pred hHHHHHHcCCC-CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc---cccccccccccccc--cccc
Confidence 44566677665 47889999999999999999999999996 4689999999653 46778889888887 4789
Q ss_pred EEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcC
Q 046057 1025 RLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDG 1104 (1198)
Q Consensus 1025 ~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~ 1104 (1198)
.|++..+...+..+|+.||++|+||..|++|++++|||++|+|||+++.|+..+++.++ .+|+++++
T Consensus 76 ~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~-------------~~g~~~~~ 142 (172)
T PF00534_consen 76 IFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDG-------------VNGFLFDP 142 (172)
T ss_dssp EEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTT-------------TSEEEEST
T ss_pred cccccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccc-------------cceEEeCC
Confidence 99999988889999999999999999999999999999999999999999999999987 79999999
Q ss_pred CCHHHHHHHHh
Q 046057 1105 ADIAGVDYALN 1115 (1198)
Q Consensus 1105 ~D~~~La~AL~ 1115 (1198)
.|+++++.+|.
T Consensus 143 ~~~~~l~~~i~ 153 (172)
T PF00534_consen 143 NDIEELADAIE 153 (172)
T ss_dssp TSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999996666
No 86
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.82 E-value=2.3e-18 Score=204.92 Aligned_cols=413 Identities=19% Similarity=0.216 Sum_probs=232.7
Q ss_pred EccccCCCCCCCcHHHHHHHHHHHHHh-CCCeEEEEeeCCCCCccccccccccc--------ccccCCCceeEEeeceec
Q 046057 715 IAVEMAPIAKVGGLGDVVTSLSRTVQD-LNHNVDIILPKYDCLKFSDVKDLGYN--------RSYHWGGTEIKVWFGKVE 785 (1198)
Q Consensus 715 Vs~e~~P~akvGGl~~vV~~LarAL~~-~GH~V~VItP~y~~~~~~~~~~l~~~--------~~~~~g~~~i~V~~~~~~ 785 (1198)
+++|.+. |+||.-+|+..=|..+++ .|.+..+|.|....-...++..+... ....-.|..+++.+..++
T Consensus 2 ~sWEVcN--KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~~~~~~Gl~v~~GRWlI~ 79 (633)
T PF05693_consen 2 VSWEVCN--KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALESMREEGLKVRYGRWLIP 79 (633)
T ss_dssp EETTTTS---SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHHHHHHTT-EEEEEEESST
T ss_pred chhhhcc--ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHHHHHhCCCeEEEeceeEC
Confidence 4566666 899999999998887765 58899999986442111111111110 112224667788888899
Q ss_pred CeEEEEeCCCCCccc-cccccC---------------CCCchhhHHHHHHHHHHHHHhcCC--CceEEEECCCChhHHHH
Q 046057 786 GLSVYFLEPQNGFFS-KGCVYG---------------CNNDKERFAFFCHAALEFLLQGGF--HPDIIHCHDWSSAPVAW 847 (1198)
Q Consensus 786 Gv~v~~l~~~~~~f~-rg~iYg---------------~~dd~~Rf~~F~~aale~L~~~~~--~PDVIH~Hdw~ta~va~ 847 (1198)
|.+.++|-....+++ ...+|+ ..++..-|++.+...++.+.+... ..-|.|+|.|+++....
T Consensus 80 G~P~vIL~D~~s~~~~ldeik~~lW~~~gIdS~~~~~dynea~~Fgyava~fi~~f~~~~~~~~~ViaHfHEWmaG~gll 159 (633)
T PF05693_consen 80 GRPIVILFDFGSFFWKLDEIKGELWELFGIDSPHGDGDYNEAVMFGYAVAWFIEEFYKFYEEKPKVIAHFHEWMAGVGLL 159 (633)
T ss_dssp T--EEEEEEGGGGGGGHHHHHHHHHHHH-----TT-HHHHHHHHHHHHHHHHHHHHHHH-S-SEEEEEEEESGGGTTHHH
T ss_pred CcCeEEEEeCchHHHHHHHHHHHHHHHcCCCCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcEEEEechHhHhHHHH
Confidence 999887765433332 111211 124455667666666655544322 34478999999987666
Q ss_pred HHHHhhhhcCCCCCeEEEEecCCchhh-------------------------------hHHHHHHhccCEEEEeCHHHHH
Q 046057 848 LFKDHYVHYGLSKARIVFTIHNLEFGT-------------------------------HHIGKAMTYADKATTVSHTYSK 896 (1198)
Q Consensus 848 llk~~y~~~gl~~ipvV~tIHn~~~~~-------------------------------~li~~~~~~AD~VitVS~~~a~ 896 (1198)
+++... ..+..|||.|..-.++ -+.+.+..+||.++|||+..+.
T Consensus 160 ~lr~~~-----~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvFTTVSeITa~ 234 (633)
T PF05693_consen 160 YLRKRK-----PDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVFTTVSEITAK 234 (633)
T ss_dssp HHHHTT------SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEEEESSHHHHH
T ss_pred HHhccC-----CCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCeeeehhhhHHH
Confidence 666543 3788999999875541 1345667889999999999988
Q ss_pred HHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHH----Hh-C---CCCCCCcEEEEE
Q 046057 897 EVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQ----KV-G---LRKSDLPLVGII 968 (1198)
Q Consensus 897 el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq----~l-G---L~~~d~plIg~V 968 (1198)
|... .+.- ..=.++|||++.+.|.-. ...-.-...+|+.+++ .+ | ++.++..+|...
T Consensus 235 Ea~~--LL~r--~pDvV~pNGl~v~~~~~~-----------~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~fts 299 (633)
T PF05693_consen 235 EAEH--LLKR--KPDVVTPNGLNVDKFPAL-----------HEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTS 299 (633)
T ss_dssp HHHH--HHSS----SEE----B-GGGTSST-----------THHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEE
T ss_pred HHHH--HhCC--CCCEEcCCCccccccccc-----------hHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEee
Confidence 8752 1111 112678999998765321 1111123345555443 32 2 222245678888
Q ss_pred ecCC-CccCHHHHHHHHHHhhc----C--CcE---EEEEecCCC---h----------hhH-------H-----------
Q 046057 969 TRLT-HQKGIHLIKHAIWRTLD----R--GGQ---VVLLGSAPD---P----------RIQ-------N----------- 1007 (1198)
Q Consensus 969 GRL~-~qKGidlIleAl~~ll~----~--~~q---LVIvGsgpd---p----------~i~-------~----------- 1007 (1198)
||+. ..||++.+++|+.+|.. . +.. |+|+=.... . .++ +
T Consensus 300 GRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~ 379 (633)
T PF05693_consen 300 GRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCL 379 (633)
T ss_dssp SSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9997 69999999999998842 1 333 344322100 0 000 0
Q ss_pred ---------------------------------------------HHHHHHHHhCCCC--CC--cEEEEccC----C---
Q 046057 1008 ---------------------------------------------DFVNLANELHSSH--AD--RARLCLTY----D--- 1031 (1198)
Q Consensus 1008 ---------------------------------------------~L~~la~eLgl~~--~d--rV~f~g~~----d--- 1031 (1198)
-+-+.+.++++.+ .+ +|.|+..| |
T Consensus 380 ~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif 459 (633)
T PF05693_consen 380 SGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIF 459 (633)
T ss_dssp HSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS
T ss_pred CCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCC
Confidence 0123334444421 23 44554433 1
Q ss_pred hHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEc---CCCHH
Q 046057 1032 EPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFD---GADIA 1108 (1198)
Q Consensus 1032 ~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~---~~D~~ 1108 (1198)
.-....+++++|+.|+||+|||+|.|.+|+.++|+|.|+|+..|.-..+...-.+. ...|+.+- ..+.+
T Consensus 460 ~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~--------~~~GV~VvdR~~~n~~ 531 (633)
T PF05693_consen 460 NLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDP--------EEYGVYVVDRRDKNYD 531 (633)
T ss_dssp -S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HH--------GGGTEEEE-SSSS-HH
T ss_pred CCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccC--------cCCcEEEEeCCCCCHH
Confidence 11246889999999999999999999999999999999999999988877541111 14577663 33445
Q ss_pred HHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhc-CHHHHHHHHHHH--HHhcCChHHH
Q 046057 1109 GVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYD-GREWLNSLCKTV--MEQDWSWNRP 1185 (1198)
Q Consensus 1109 ~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~-~~e~~~~L~~~a--m~qdfSW~~~ 1185 (1198)
+.+..|. ..|..+.. ++..+..++.++ .....+|.+.
T Consensus 532 e~v~~la----------------------------------------~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~ 571 (633)
T PF05693_consen 532 ESVNQLA----------------------------------------DFLYKFCQLSRRQRIIQRNRAERLSDLADWKNF 571 (633)
T ss_dssp HHHHHHH----------------------------------------HHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHH
T ss_pred HHHHHHH----------------------------------------HHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHH
Confidence 5555544 33333322 333334444444 5678999999
Q ss_pred HHHHHHHHHHHh
Q 046057 1186 ALDYMELYRAAR 1197 (1198)
Q Consensus 1186 A~~yielY~~a~ 1197 (1198)
..-|.+.|+.|+
T Consensus 572 ~~yY~~Ay~~AL 583 (633)
T PF05693_consen 572 GKYYEKAYDLAL 583 (633)
T ss_dssp CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999876
No 87
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.82 E-value=7.8e-18 Score=195.00 Aligned_cols=260 Identities=16% Similarity=0.104 Sum_probs=179.1
Q ss_pred cCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh--------hhHHHHHHhccCEEEEeCHHHHHHHh
Q 046057 828 GGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG--------THHIGKAMTYADKATTVSHTYSKEVA 899 (1198)
Q Consensus 828 ~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~--------~~li~~~~~~AD~VitVS~~~a~el~ 899 (1198)
.+++..|++.+......+... +.+.++|+.+++.... ....+..++.||.|+|+|+.+.+.+.
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~---------~~~~~~Vyd~~D~~~~~~~~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~ 169 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL---------LQASLVVYDCVDDLSAFPGGPPELLEAERRLLKRADLVFTTSPSLYEAKR 169 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh---------cCCCeEEEEcccchhccCCCCHHHHHHHHHHHHhCCEEEECCHHHHHHHh
Confidence 456677888775443333222 2378999999986432 12456778999999999999998886
Q ss_pred CCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHH
Q 046057 900 GDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHL 979 (1198)
Q Consensus 900 ~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidl 979 (1198)
..+ .++++|+||+|.+.|.+...... . .+... ..+.++|+|+|++.+.+++++
T Consensus 170 ~~~------~~i~~i~ngvd~~~f~~~~~~~~----------------~--~~~~~---~~~~~~i~y~G~l~~~~d~~l 222 (373)
T cd04950 170 RLN------PNVVLVPNGVDYEHFAAARDPPP----------------P--PADLA---ALPRPVIGYYGAIAEWLDLEL 222 (373)
T ss_pred hCC------CCEEEcccccCHHHhhcccccCC----------------C--hhHHh---cCCCCEEEEEeccccccCHHH
Confidence 321 58999999999988876321100 0 00111 125689999999999888887
Q ss_pred HHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCC-----CCC
Q 046057 980 IKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIF-----EPC 1054 (1198)
Q Consensus 980 IleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~-----Epf 1054 (1198)
|.+++.. .++++|+|+|.++. . .....+ .. .++|+|+|..+.+++..+|+++|++++|+.. +.+
T Consensus 223 l~~la~~--~p~~~~vliG~~~~-~--~~~~~~---~~---~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~ 291 (373)
T cd04950 223 LEALAKA--RPDWSFVLIGPVDV-S--IDPSAL---LR---LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATS 291 (373)
T ss_pred HHHHHHH--CCCCEEEEECCCcC-c--cChhHh---cc---CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCC
Confidence 7666543 36899999998721 1 111111 11 2689999999999999999999999999874 367
Q ss_pred cHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccc
Q 046057 1055 GLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDL 1134 (1198)
Q Consensus 1055 GLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~ 1134 (1198)
|+.++|||++|+|||+++.+ +++... . |..+.+.|+++++++|.
T Consensus 292 P~Kl~EylA~G~PVVat~~~---~~~~~~-------------~-~~~~~~~d~~~~~~ai~------------------- 335 (373)
T cd04950 292 PLKLFEYLAAGKPVVATPLP---EVRRYE-------------D-EVVLIADDPEEFVAAIE------------------- 335 (373)
T ss_pred cchHHHHhccCCCEEecCcH---HHHhhc-------------C-cEEEeCCCHHHHHHHHH-------------------
Confidence 89999999999999999764 444432 2 34444569999998888
Q ss_pred cCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 046057 1135 EGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRA 1195 (1198)
Q Consensus 1135 ~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~ 1195 (1198)
.++.. ++++..... .+ +...+||+..++++++..++
T Consensus 336 ---------------------~~l~~--~~~~~~~~~-~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 336 ---------------------KALLE--DGPARERRR-LR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred ---------------------HHHhc--CCchHHHHH-HH-HHHHCCHHHHHHHHHHHHHh
Confidence 44322 222222222 22 56789999999999976654
No 88
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.82 E-value=2.5e-18 Score=199.83 Aligned_cols=272 Identities=14% Similarity=0.061 Sum_probs=184.5
Q ss_pred HHHHHHHHhcCCCceEEEECC-CChhHHHHHHHHhhhhcCCCCCeEEEEecCCc-hhhhHHHHHHhccCEEEEeCHHHHH
Q 046057 819 HAALEFLLQGGFHPDIIHCHD-WSSAPVAWLFKDHYVHYGLSKARIVFTIHNLE-FGTHHIGKAMTYADKATTVSHTYSK 896 (1198)
Q Consensus 819 ~aale~L~~~~~~PDVIH~Hd-w~ta~va~llk~~y~~~gl~~ipvV~tIHn~~-~~~~li~~~~~~AD~VitVS~~~a~ 896 (1198)
+.+.+++++ .+|||||||. |.......++..... ....++|++.+++++. .. ..+....+|.++++|+...+
T Consensus 90 ~~l~~~i~~--~~pDvIi~thp~~~~~~~~~l~~~~~-~~~~~~p~~~~~tD~~~~~---~~w~~~~~d~~~~~s~~~~~ 163 (382)
T PLN02605 90 REVAKGLMK--YKPDIIVSVHPLMQHVPLRVLRWQGK-ELGKKIPFTTVVTDLGTCH---PTWFHKGVTRCFCPSEEVAK 163 (382)
T ss_pred HHHHHHHHh--cCcCEEEEeCcCcccCHHHHHHHHhh-ccCCCCCEEEEECCCCCcC---cccccCCCCEEEECCHHHHH
Confidence 444455555 4899999954 443322233332211 1123789998887763 22 22334689999999999999
Q ss_pred HHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccC
Q 046057 897 EVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKG 976 (1198)
Q Consensus 897 el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKG 976 (1198)
++...+ ....|++++.+++|.+++.+. ..+..+++++|++ ++.++|+++|+....|+
T Consensus 164 ~l~~~g---~~~~ki~v~g~~v~~~f~~~~-------------------~~~~~~r~~~gl~-~~~~~il~~Gg~~g~~~ 220 (382)
T PLN02605 164 RALKRG---LEPSQIRVYGLPIRPSFARAV-------------------RPKDELRRELGMD-EDLPAVLLMGGGEGMGP 220 (382)
T ss_pred HHHHcC---CCHHHEEEECcccCHhhccCC-------------------CCHHHHHHHcCCC-CCCcEEEEECCCccccc
Confidence 887543 456789999888887654331 1245688999998 47789999999999999
Q ss_pred HHHHHHHHHHhh------cCCcE-EEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcC
Q 046057 977 IHLIKHAIWRTL------DRGGQ-VVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPS 1049 (1198)
Q Consensus 977 idlIleAl~~ll------~~~~q-LVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS 1049 (1198)
+..+++++..++ .++.+ ++++|.+ ..+.+.++++ .. ..+|+|+|..++ ++.+|++||++|.+|
T Consensus 221 ~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~--~~~~~~L~~~----~~--~~~v~~~G~~~~--~~~l~~aaDv~V~~~ 290 (382)
T PLN02605 221 LEETARALGDSLYDKNLGKPIGQVVVICGRN--KKLQSKLESR----DW--KIPVKVRGFVTN--MEEWMGACDCIITKA 290 (382)
T ss_pred HHHHHHHHHHhhccccccCCCceEEEEECCC--HHHHHHHHhh----cc--cCCeEEEecccc--HHHHHHhCCEEEECC
Confidence 999999997654 34566 5666754 2233344433 22 246889888764 789999999999865
Q ss_pred CCCCCcHHHHHHHHhCCcEEEeCC------ccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhccccccc
Q 046057 1050 IFEPCGLTQLVAMRYGSIPVVRKT------GGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFH 1123 (1198)
Q Consensus 1050 ~~EpfGLt~LEAMa~G~PvIvt~t------GGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~ 1123 (1198)
.|++++|||+||+|+|+++. |+...++.. ..|+.+ .|+++|+++|.
T Consensus 291 ----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~--------------g~g~~~--~~~~~la~~i~-------- 342 (382)
T PLN02605 291 ----GPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN--------------GFGAFS--ESPKEIARIVA-------- 342 (382)
T ss_pred ----CcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC--------------Cceeec--CCHHHHHHHHH--------
Confidence 58999999999999999983 444333322 456654 78999996665
Q ss_pred ccccccccccccCCCCcccccccccccchhHHHHHHHHhcC-HHHHHHHHHHHHH--hcCChHHHHHHHHHHH
Q 046057 1124 TTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDG-REWLNSLCKTVME--QDWSWNRPALDYMELY 1193 (1198)
Q Consensus 1124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~-~e~~~~L~~~am~--qdfSW~~~A~~yielY 1193 (1198)
.+..+ ++.+++|++++.+ ...++.+++...+++.
T Consensus 343 ------------------------------------~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 343 ------------------------------------EWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELV 379 (382)
T ss_pred ------------------------------------HHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence 33344 7777888877732 3456677776665543
No 89
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.80 E-value=4.5e-18 Score=198.65 Aligned_cols=277 Identities=11% Similarity=0.099 Sum_probs=180.5
Q ss_pred HHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhhHHHHHHhccCEEEEeCHHHHHH
Q 046057 818 CHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKE 897 (1198)
Q Consensus 818 ~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~li~~~~~~AD~VitVS~~~a~e 897 (1198)
...+.+++++ .+||+|||+.... ....++.. +..++|++..+++..... .+....+|.+++.|+...+.
T Consensus 93 ~~~l~~~l~~--~kPDvVi~~~p~~--~~~~l~~~----~~~~iP~~~v~td~~~~~---~w~~~~~d~~~v~s~~~~~~ 161 (391)
T PRK13608 93 LNKLINLLIK--EKPDLILLTFPTP--VMSVLTEQ----FNINIPVATVMTDYRLHK---NWITPYSTRYYVATKETKQD 161 (391)
T ss_pred HHHHHHHHHH--hCcCEEEECCcHH--HHHHHHHh----cCCCCCEEEEeCCCCccc---ccccCCCCEEEECCHHHHHH
Confidence 3566677766 5999999974322 22222221 123789876665542221 22346799999999999998
Q ss_pred HhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCH
Q 046057 898 VAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGI 977 (1198)
Q Consensus 898 l~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGi 977 (1198)
+...+ .+..++.++.|+++..+..+ ..+..+++++|++++...++++.|++...||+
T Consensus 162 l~~~g---i~~~ki~v~GiPv~~~f~~~--------------------~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~ 218 (391)
T PRK13608 162 FIDVG---IDPSTVKVTGIPIDNKFETP--------------------IDQKQWLIDNNLDPDKQTILMSAGAFGVSKGF 218 (391)
T ss_pred HHHcC---CCHHHEEEECeecChHhccc--------------------ccHHHHHHHcCCCCCCCEEEEECCCcccchhH
Confidence 87533 34567887766665432211 01345677899984344456678999989999
Q ss_pred HHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHH
Q 046057 978 HLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLT 1057 (1198)
Q Consensus 978 dlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt 1057 (1198)
+.+++++... .++++++++++. .+... +++.+.++. .++|.|+|..+ .++.+|+.||++|. ++.|+|
T Consensus 219 ~~li~~~~~~-~~~~~~vvv~G~-~~~l~---~~l~~~~~~--~~~v~~~G~~~--~~~~~~~~aDl~I~----k~gg~t 285 (391)
T PRK13608 219 DTMITDILAK-SANAQVVMICGK-SKELK---RSLTAKFKS--NENVLILGYTK--HMNEWMASSQLMIT----KPGGIT 285 (391)
T ss_pred HHHHHHHHhc-CCCceEEEEcCC-CHHHH---HHHHHHhcc--CCCeEEEeccc--hHHHHHHhhhEEEe----CCchHH
Confidence 9999986332 246888776543 22222 333333443 25788888764 37899999999996 467999
Q ss_pred HHHHHHhCCcEEEeC-CccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccC
Q 046057 1058 QLVAMRYGSIPVVRK-TGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEG 1136 (1198)
Q Consensus 1058 ~LEAMa~G~PvIvt~-tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~ 1136 (1198)
++|||++|+|+|+++ .+| .|.. +. .-......|+. ..|+++++++|.
T Consensus 286 l~EA~a~G~PvI~~~~~pg-qe~~-N~-------~~~~~~G~g~~--~~~~~~l~~~i~--------------------- 333 (391)
T PRK13608 286 ISEGLARCIPMIFLNPAPG-QELE-NA-------LYFEEKGFGKI--ADTPEEAIKIVA--------------------- 333 (391)
T ss_pred HHHHHHhCCCEEECCCCCC-cchh-HH-------HHHHhCCcEEE--eCCHHHHHHHHH---------------------
Confidence 999999999999985 343 1211 10 00000134544 458888885544
Q ss_pred CCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHH--HhcCChHHHHHHHHHHHHHH
Q 046057 1137 QPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVM--EQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1137 ~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am--~qdfSW~~~A~~yielY~~a 1196 (1198)
.+.++++.+.+|++++. ...++++.+++.+++++..+
T Consensus 334 -----------------------~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~ 372 (391)
T PRK13608 334 -----------------------SLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHS 372 (391)
T ss_pred -----------------------HHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhh
Confidence 45578888889988883 45799999999999988764
No 90
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.80 E-value=9.1e-18 Score=200.35 Aligned_cols=295 Identities=14% Similarity=0.099 Sum_probs=218.5
Q ss_pred HHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---------hhHHHHHHhccCE
Q 046057 816 FFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG---------THHIGKAMTYADK 886 (1198)
Q Consensus 816 ~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~---------~~li~~~~~~AD~ 886 (1198)
.|+.++.+.+ ..-|+|-.||.+..++|.+++... .+.++-|..|...+. +.-+-.+|-.||.
T Consensus 121 ~FA~~i~~~~----~~~d~vWVhDYhL~llp~~LR~~~-----~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDl 191 (487)
T TIGR02398 121 AFAEAACLEA----AEGATVWVHDYNLWLVPGYIRQLR-----PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDY 191 (487)
T ss_pred HHHHHHHHhc----CCCCEEEEecchhhHHHHHHHHhC-----CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCe
Confidence 3444444433 234899999999999999998764 478999999987654 3344567889999
Q ss_pred EEEeCHHHHHHHhCC-----C--C---------------------------CCCCCCcEEEEeCCCCCCCCCCCCCCCCC
Q 046057 887 ATTVSHTYSKEVAGD-----P--A---------------------------IAPHLHKFYGILNGIDQDMWDPFNDKFIP 932 (1198)
Q Consensus 887 VitVS~~~a~el~~~-----~--~---------------------------l~~~~~K~~vI~NGID~d~~~P~~D~~Lp 932 (1198)
|-.-...|++.+... + . +..+.-++.++|.|||++.|.+....
T Consensus 192 iGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~--- 268 (487)
T TIGR02398 192 IGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAA--- 268 (487)
T ss_pred EEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcC---
Confidence 999999988776531 0 0 00222347889999999887542110
Q ss_pred cccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC------CcEEEEEecCCC----
Q 046057 933 VSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR------GGQVVLLGSAPD---- 1002 (1198)
Q Consensus 933 ~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~------~~qLVIvGsgpd---- 1002 (1198)
+........++++++ +.++|+.++||+..||+...++|+.+++++ .+.||++|.+..
T Consensus 269 ---------~~~~~~~~~lr~~~~----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~ 335 (487)
T TIGR02398 269 ---------ASIREMMERIRSELA----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMT 335 (487)
T ss_pred ---------chHHHHHHHHHHHcC----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccch
Confidence 111223456888886 578999999999999999999999999753 368888887532
Q ss_pred --hhhHHHHHHHHHHhCCCCC-----CcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCC----cEEEe
Q 046057 1003 --PRIQNDFVNLANELHSSHA-----DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGS----IPVVR 1071 (1198)
Q Consensus 1003 --p~i~~~L~~la~eLgl~~~-----drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~----PvIvt 1071 (1198)
..++..+++++.+++-++. ..+.|.+.++.+++..+|+.||++|+||..||++|+.+|+|+|+. |+|.|
T Consensus 336 ~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILS 415 (487)
T TIGR02398 336 IYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLS 415 (487)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEe
Confidence 2366778888887754433 346777788999999999999999999999999999999999988 99999
Q ss_pred CCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccc
Q 046057 1072 KTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMT 1151 (1198)
Q Consensus 1072 ~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1151 (1198)
..+|..+... .+++|+|.|+++++++|.
T Consensus 416 efaGaa~~l~----------------~AllVNP~d~~~~A~ai~------------------------------------ 443 (487)
T TIGR02398 416 EFAGAAVELK----------------GALLTNPYDPVRMDETIY------------------------------------ 443 (487)
T ss_pred ccccchhhcC----------------CCEEECCCCHHHHHHHHH------------------------------------
Confidence 9999986652 389999999999999999
Q ss_pred hhHHHHHHHHhcC-HHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 046057 1152 YDSFRAISAYYDG-REWLNSLCKTVMEQDWSWNRPALDYMELY 1193 (1198)
Q Consensus 1152 ~~~~rAI~~l~~~-~e~~~~L~~~am~qdfSW~~~A~~yielY 1193 (1198)
+||.+-... .+.+..|.+.. ..++....++.++.-+
T Consensus 444 ----~AL~m~~~Er~~R~~~l~~~v--~~~d~~~W~~~fl~~l 480 (487)
T TIGR02398 444 ----VALAMPKAEQQARMREMFDAV--NYYDVQRWADEFLAAV 480 (487)
T ss_pred ----HHHcCCHHHHHHHHHHHHHHH--hhCCHHHHHHHHHHHh
Confidence 777664332 22333444443 3567888888877644
No 91
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.76 E-value=3.8e-16 Score=167.58 Aligned_cols=268 Identities=28% Similarity=0.382 Sum_probs=191.7
Q ss_pred ceEEEECCCChhHH---HHHHHHhhhhcCCCCCeEEEEecCCchhh----------h----HH---HHHH-hccCEEEEe
Q 046057 832 PDIIHCHDWSSAPV---AWLFKDHYVHYGLSKARIVFTIHNLEFGT----------H----HI---GKAM-TYADKATTV 890 (1198)
Q Consensus 832 PDVIH~Hdw~ta~v---a~llk~~y~~~gl~~ipvV~tIHn~~~~~----------~----li---~~~~-~~AD~VitV 890 (1198)
+|++|++....... ...... ....+.+..+|...... . .. .... ...+.+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLK------LLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAV 157 (381)
T ss_pred cceeeccccccccchhHHHhhcc------ccCCcEEEeecCCcccccccccchhhHHHHHHHHHHHHHhccccccEEEEC
Confidence 59999987554432 111111 12678888888875420 0 00 1111 137888888
Q ss_pred CHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCC-CcEEEEEe
Q 046057 891 SHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSD-LPLVGIIT 969 (1198)
Q Consensus 891 S~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d-~plIg~VG 969 (1198)
+......+..... ..++..++|+++.+.+.+. ..++.... ...++++|
T Consensus 158 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~i~~~g 206 (381)
T COG0438 158 SPALKELLEALGV----PNKIVVIPNGIDTEKFAPA---------------------------RIGLLPEGGKFVVLYVG 206 (381)
T ss_pred CHHHHHHHHHhCC----CCCceEecCCcCHHHcCcc---------------------------ccCCCcccCceEEEEee
Confidence 8887555542221 1278899999998876641 11222112 36899999
Q ss_pred cCCCccCHHHHHHHHHHhhcCC--cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEE
Q 046057 970 RLTHQKGIHLIKHAIWRTLDRG--GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILV 1047 (1198)
Q Consensus 970 RL~~qKGidlIleAl~~ll~~~--~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~Lv 1047 (1198)
|+.+.||++.+++|+..+.... +.++++|.++.. ...+..+..+++. .+++.|.|..+...+..+++.||++++
T Consensus 207 ~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~--~~~v~~~g~~~~~~~~~~~~~~~~~v~ 282 (381)
T COG0438 207 RLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER--REELEKLAKKLGL--EDNVKFLGYVPDEELAELLASADVFVL 282 (381)
T ss_pred ccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc--HHHHHHHHHHhCC--CCcEEEecccCHHHHHHHHHhCCEEEe
Confidence 9999999999999999997653 799999998543 3455567777665 367999888886666779999999999
Q ss_pred cCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhccccccccccc
Q 046057 1048 PSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSR 1127 (1198)
Q Consensus 1048 PS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~ 1127 (1198)
||.+|++|++++|||++|+|+|+++++|..+++.++ .+|+++...|.++++.++.
T Consensus 283 ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~-------------~~g~~~~~~~~~~~~~~i~------------ 337 (381)
T COG0438 283 PSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDG-------------ETGLLVPPGDVEELADALE------------ 337 (381)
T ss_pred ccccccchHHHHHHHhcCCcEEECCCCChHHHhcCC-------------CceEecCCCCHHHHHHHHH------------
Confidence 999999999999999999999999999999999886 4788777778899996666
Q ss_pred ccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHH---HHHhcCChHHHHHHHHHHHHHHh
Q 046057 1128 LYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKT---VMEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~---am~qdfSW~~~A~~yielY~~a~ 1197 (1198)
.+.++.+.++.+... .....|+|+..+.++.++|....
T Consensus 338 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (381)
T COG0438 338 --------------------------------QLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELL 378 (381)
T ss_pred --------------------------------HHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 222333444444431 13368999999999999998764
No 92
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.71 E-value=1.2e-15 Score=192.50 Aligned_cols=298 Identities=15% Similarity=0.172 Sum_probs=210.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---------hhHHHHHHhccCE
Q 046057 816 FFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG---------THHIGKAMTYADK 886 (1198)
Q Consensus 816 ~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~---------~~li~~~~~~AD~ 886 (1198)
.|+.++.+..+ .=|+|.+||++..++|.+++... .+.++-|.+|...+. +.-+-.+|-.||.
T Consensus 220 ~FA~~i~~~~~----~gD~VWVHDYHL~LlP~~LR~~~-----p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDl 290 (934)
T PLN03064 220 MFADVVNEHYE----EGDVVWCHDYHLMFLPKCLKEYN-----SNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADL 290 (934)
T ss_pred HHHHHHHHhcC----CCCEEEEecchhhHHHHHHHHhC-----CCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCe
Confidence 45555555442 34899999999999999998764 478999999998654 3344567889999
Q ss_pred EEEeCHHHHHHHhCC-----C------CC--CCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHH
Q 046057 887 ATTVSHTYSKEVAGD-----P------AI--APHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQ 953 (1198)
Q Consensus 887 VitVS~~~a~el~~~-----~------~l--~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq 953 (1198)
|-.-+..|++.+... + .+ ..+..++.+.|-|||++.|..... . +.-......+++
T Consensus 291 IGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~--------~----~~v~~~~~~lr~ 358 (934)
T PLN03064 291 VGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALE--------T----PQVQQHIKELKE 358 (934)
T ss_pred EEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhc--------C----hhHHHHHHHHHH
Confidence 999999998877641 0 00 111223556789999887653210 0 011122346777
Q ss_pred HhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC--C--cEEEEE-------ecCCC-hhhHHHHHHHHHHhCCCCC
Q 046057 954 KVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR--G--GQVVLL-------GSAPD-PRIQNDFVNLANELHSSHA 1021 (1198)
Q Consensus 954 ~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~--~--~qLVIv-------Gsgpd-p~i~~~L~~la~eLgl~~~ 1021 (1198)
+++ ++.+|+.|+||+..||+...+.|+.++++. . .++|++ +++++ ..++..+.+++.+.+-.|.
T Consensus 359 ~~~----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg 434 (934)
T PLN03064 359 RFA----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFG 434 (934)
T ss_pred HhC----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhcc
Confidence 774 567999999999999999999999998753 3 245555 33322 1244556677776665443
Q ss_pred C----cEEE-EccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCC----cEEEeCCccccccccccccchhhhhc
Q 046057 1022 D----RARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGS----IPVVRKTGGLYDTVFDVDHDKERAQA 1092 (1198)
Q Consensus 1022 d----rV~f-~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~----PvIvt~tGGl~E~V~d~d~~~~~~~~ 1092 (1198)
. -|++ ...++.+++..+|+.||++|+||..|+++|+.+|+|+|+. ++|.+...|..+.+.
T Consensus 435 ~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L~----------- 503 (934)
T PLN03064 435 TLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSLG----------- 503 (934)
T ss_pred CCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHhC-----------
Confidence 2 1333 3347889999999999999999999999999999999954 666699999998883
Q ss_pred cCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHH
Q 046057 1093 LDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLC 1172 (1198)
Q Consensus 1093 ~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~ 1172 (1198)
..+++|+|.|+++++++|. +|+.+ +++.+..+.
T Consensus 504 ----~~AllVNP~D~~~vA~AI~----------------------------------------~AL~M---~~~Er~~r~ 536 (934)
T PLN03064 504 ----AGAILVNPWNITEVAASIA----------------------------------------QALNM---PEEEREKRH 536 (934)
T ss_pred ----CceEEECCCCHHHHHHHHH----------------------------------------HHHhC---CHHHHHHHH
Confidence 3499999999999999998 77764 233333333
Q ss_pred HHH--HHhcCChHHHHHHHHHHHHHH
Q 046057 1173 KTV--MEQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1173 ~~a--m~qdfSW~~~A~~yielY~~a 1196 (1198)
++. ....++|...++.++.-+..+
T Consensus 537 ~~~~~~V~~~d~~~Wa~~fl~~L~~~ 562 (934)
T PLN03064 537 RHNFMHVTTHTAQEWAETFVSELNDT 562 (934)
T ss_pred HHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 333 225689999999988755543
No 93
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.71 E-value=6.4e-16 Score=177.95 Aligned_cols=245 Identities=17% Similarity=0.099 Sum_probs=166.0
Q ss_pred hHHHHHHHHHHHHHhcCCCceEEEEC-CCChhHHHHHHHHhhhhcCCCCCeEEEEecCCch-------hhhHHHHHH-hc
Q 046057 813 RFAFFCHAALEFLLQGGFHPDIIHCH-DWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEF-------GTHHIGKAM-TY 883 (1198)
Q Consensus 813 Rf~~F~~aale~L~~~~~~PDVIH~H-dw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~-------~~~li~~~~-~~ 883 (1198)
........+.+++++ .+||+||+| |+..++++.+++... ++|++.+-+.... .....+..+ ..
T Consensus 70 ~~~~~~~~l~~~l~~--~~pDiv~~~gd~~~~la~a~aa~~~------~ipv~h~~~g~~s~~~~~~~~~~~~r~~~~~~ 141 (365)
T TIGR00236 70 ITSNMLEGLEELLLE--EKPDIVLVQGDTTTTLAGALAAFYL------QIPVGHVEAGLRTGDRYSPMPEEINRQLTGHI 141 (365)
T ss_pred HHHHHHHHHHHHHHH--cCCCEEEEeCCchHHHHHHHHHHHh------CCCEEEEeCCCCcCCCCCCCccHHHHHHHHHH
Confidence 333444455566665 489999999 577677676666554 8998865443311 112223333 35
Q ss_pred cCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCC-CCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCC
Q 046057 884 ADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGI-DQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDL 962 (1198)
Q Consensus 884 AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGI-D~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~ 962 (1198)
||.++++|+...+.+... +....+++++.||+ |...+.+ ....+..++++++.+ .
T Consensus 142 ad~~~~~s~~~~~~l~~~---G~~~~~I~vign~~~d~~~~~~------------------~~~~~~~~~~~~~~~---~ 197 (365)
T TIGR00236 142 ADLHFAPTEQAKDNLLRE---NVKADSIFVTGNTVIDALLTNV------------------EIAYSSPVLSEFGED---K 197 (365)
T ss_pred HHhccCCCHHHHHHHHHc---CCCcccEEEeCChHHHHHHHHH------------------hhccchhHHHhcCCC---C
Confidence 899999999999999753 45567899999996 4321111 001123455666632 3
Q ss_pred cEEEEEe-cC-CCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHH
Q 046057 963 PLVGIIT-RL-THQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLI 1038 (1198)
Q Consensus 963 plIg~VG-RL-~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~i 1038 (1198)
+++++.+ |. ...||++.+++|+..+.+ +++++++.|.+ ++..... +.+.++. .++|+|++.+.......+
T Consensus 198 ~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~-~~~~~~~---~~~~~~~--~~~v~~~~~~~~~~~~~~ 271 (365)
T TIGR00236 198 RYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHL-NPVVREP---LHKHLGD--SKRVHLIEPLEYLDFLNL 271 (365)
T ss_pred CEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCC-ChHHHHH---HHHHhCC--CCCEEEECCCChHHHHHH
Confidence 4555554 54 346899999999998864 37888888653 3333332 3444543 468999998887777899
Q ss_pred HHHccEEEEcCCCCCCcHHHHHHHHhCCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1039 YAGADFILVPSIFEPCGLTQLVAMRYGSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1039 yA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
++.||+++.|| |..++|||++|+|+|+ +++|+.++++.+ .+|+++ +.|+++++++|.
T Consensus 272 l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~--------------g~~~lv-~~d~~~i~~ai~ 329 (365)
T TIGR00236 272 AANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEA--------------GTNKLV-GTDKENITKAAK 329 (365)
T ss_pred HHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhc--------------CceEEe-CCCHHHHHHHHH
Confidence 99999999998 5668999999999999 478888888865 356666 478999985555
No 94
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.71 E-value=2e-15 Score=174.11 Aligned_cols=237 Identities=14% Similarity=-0.032 Sum_probs=150.1
Q ss_pred HHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCch--hhhHHHHHHhccCEEEEeCHHHHH
Q 046057 819 HAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEF--GTHHIGKAMTYADKATTVSHTYSK 896 (1198)
Q Consensus 819 ~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~--~~~li~~~~~~AD~VitVS~~~a~ 896 (1198)
..+.+++++ .+||+||+|+..+.+......... .++|+++++|+..+ .....+.....+|.++++|+...+
T Consensus 75 ~~~~~~l~~--~kPdivi~~~~~~~~~~~a~~a~~-----~~ip~i~~~~~~~~~~~~~~~~~~~~~~d~i~~~~~~~~~ 147 (380)
T PRK00025 75 RRLKRRLLA--EPPDVFIGIDAPDFNLRLEKKLRK-----AGIPTIHYVSPSVWAWRQGRAFKIAKATDHVLALFPFEAA 147 (380)
T ss_pred HHHHHHHHH--cCCCEEEEeCCCCCCHHHHHHHHH-----CCCCEEEEeCCchhhcCchHHHHHHHHHhhheeCCccCHH
Confidence 344555554 589999999743222222211111 27999998886532 122334456789999999998887
Q ss_pred HHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEE-EEEe-cCCCc
Q 046057 897 EVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLV-GIIT-RLTHQ 974 (1198)
Q Consensus 897 el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plI-g~VG-RL~~q 974 (1198)
.+...+ .++.++.|.+.... .+ ...+..+++++|++. +.++| ++.| |....
T Consensus 148 ~~~~~g------~~~~~~G~p~~~~~-~~-------------------~~~~~~~~~~l~~~~-~~~~il~~~gsr~~~~ 200 (380)
T PRK00025 148 FYDKLG------VPVTFVGHPLADAI-PL-------------------LPDRAAARARLGLDP-DARVLALLPGSRGQEI 200 (380)
T ss_pred HHHhcC------CCeEEECcCHHHhc-cc-------------------ccChHHHHHHcCCCC-CCCEEEEECCCCHHHH
Confidence 775322 12444433332211 00 001345678899873 45554 4444 44444
Q ss_pred -cCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHh-CCCCCCcEEEEccCChHHHHHHHHHccEEEEcCC
Q 046057 975 -KGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANEL-HSSHADRARLCLTYDEPLSHLIYAGADFILVPSI 1050 (1198)
Q Consensus 975 -KGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eL-gl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~ 1050 (1198)
++++.+++|+..+.+ ++++|+++|..+ ...+.++++.+++ ++ ++.+.. +.+..+|+.||++|++|
T Consensus 201 ~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~--~~~~~~~~~~~~~~~~----~v~~~~----~~~~~~~~~aDl~v~~s- 269 (380)
T PRK00025 201 KRLLPPFLKAAQLLQQRYPDLRFVLPLVNP--KRREQIEEALAEYAGL----EVTLLD----GQKREAMAAADAALAAS- 269 (380)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEEecCCh--hhHHHHHHHHhhcCCC----CeEEEc----ccHHHHHHhCCEEEECc-
Confidence 447889999988864 368999987632 2456677777665 44 255532 24689999999999998
Q ss_pred CCCCcHHHHHHHHhCCcEEEe-----------------CCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHH
Q 046057 1051 FEPCGLTQLVAMRYGSIPVVR-----------------KTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYA 1113 (1198)
Q Consensus 1051 ~EpfGLt~LEAMa~G~PvIvt-----------------~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~A 1113 (1198)
|.+.+|||++|+|+|+. +.+|+++++.+. ....+++.+..|++.|+++
T Consensus 270 ----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~l~~~ 334 (380)
T PRK00025 270 ----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGR-----------ELVPELLQEEATPEKLARA 334 (380)
T ss_pred ----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCC-----------CcchhhcCCCCCHHHHHHH
Confidence 88999999999999986 455666666553 1135677788889999855
Q ss_pred Hh
Q 046057 1114 LN 1115 (1198)
Q Consensus 1114 L~ 1115 (1198)
+.
T Consensus 335 i~ 336 (380)
T PRK00025 335 LL 336 (380)
T ss_pred HH
Confidence 54
No 95
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.70 E-value=1.9e-15 Score=172.56 Aligned_cols=244 Identities=15% Similarity=0.070 Sum_probs=163.9
Q ss_pred HHHHHHHHHHhcCCCceEEEECCCC-hhHHHHHHHHhhhhcCCCCCeEEEEecCCch-----hhhHHHH-HHhccCEEEE
Q 046057 817 FCHAALEFLLQGGFHPDIIHCHDWS-SAPVAWLFKDHYVHYGLSKARIVFTIHNLEF-----GTHHIGK-AMTYADKATT 889 (1198)
Q Consensus 817 F~~aale~L~~~~~~PDVIH~Hdw~-ta~va~llk~~y~~~gl~~ipvV~tIHn~~~-----~~~li~~-~~~~AD~Vit 889 (1198)
....+.+.++. .+|||||+|... ..+.+.++.... ++|++++.|+... .....+. ....+|.+++
T Consensus 76 ~~~~l~~~l~~--~~pDvV~~~g~~~~~~~~~~aa~~~------~iPvv~~~~g~~s~~~~~~~~~~r~~~~~~ad~~~~ 147 (363)
T cd03786 76 LLIGLEAVLLE--EKPDLVLVLGDTNETLAAALAAFKL------GIPVAHVEAGLRSFDRGMPDEENRHAIDKLSDLHFA 147 (363)
T ss_pred HHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHc------CCCEEEEecccccCCCCCCchHHHHHHHHHhhhccC
Confidence 34455555655 389999999643 344444444332 8999877665321 1122333 3467899999
Q ss_pred eCHHHHHHHhCCCCCCCCCCcEEEEeCCC-CCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEE
Q 046057 890 VSHTYSKEVAGDPAIAPHLHKFYGILNGI-DQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGII 968 (1198)
Q Consensus 890 VS~~~a~el~~~~~l~~~~~K~~vI~NGI-D~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~V 968 (1198)
+|+...+.+... +.+..++.+|.|++ |...+.+.. ......++.++++ ++..+++++
T Consensus 148 ~s~~~~~~l~~~---G~~~~kI~vign~v~d~~~~~~~~------------------~~~~~~~~~~~~~-~~~~vlv~~ 205 (363)
T cd03786 148 PTEEARRNLLQE---GEPPERIFVVGNTMIDALLRLLEL------------------AKKELILELLGLL-PKKYILVTL 205 (363)
T ss_pred CCHHHHHHHHHc---CCCcccEEEECchHHHHHHHHHHh------------------hccchhhhhcccC-CCCEEEEEe
Confidence 999999988653 34567899999995 432211100 0011123567775 355677789
Q ss_pred ecCCC---ccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEE
Q 046057 969 TRLTH---QKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFI 1045 (1198)
Q Consensus 969 GRL~~---qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~ 1045 (1198)
||+.. .||++.+++|+..+.+.++++++.|.++ ....+++++.++++ +.++++|.+......+..+|+.||++
T Consensus 206 ~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~---~~~~l~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~ad~~ 281 (363)
T cd03786 206 HRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR---TRPRIREAGLEFLG-HHPNVLLISPLGYLYFLLLLKNADLV 281 (363)
T ss_pred CCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC---hHHHHHHHHHhhcc-CCCCEEEECCcCHHHHHHHHHcCcEE
Confidence 99875 7999999999998865456666655542 45778888877765 23689998876677789999999999
Q ss_pred EEcCCCCCCcHHHHHHHHhCCcEEEeCC-ccccccccccccchhhhhccCCCCcEEEEcCC-CHHHHHHHHh
Q 046057 1046 LVPSIFEPCGLTQLVAMRYGSIPVVRKT-GGLYDTVFDVDHDKERAQALDLEPNGFSFDGA-DIAGVDYALN 1115 (1198)
Q Consensus 1046 LvPS~~EpfGLt~LEAMa~G~PvIvt~t-GGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~-D~~~La~AL~ 1115 (1198)
|.||- | ++.|||++|+|+|+... +..++.+. +|+.+... |+++++++|.
T Consensus 282 v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~----------------~g~~~~~~~~~~~i~~~i~ 332 (363)
T cd03786 282 LTDSG----G-IQEEASFLGVPVLNLRDRTERPETVE----------------SGTNVLVGTDPEAILAAIE 332 (363)
T ss_pred EEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhh----------------eeeEEecCCCHHHHHHHHH
Confidence 99994 5 47999999999999754 33444443 45555443 6888987766
No 96
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.60 E-value=7.7e-13 Score=151.61 Aligned_cols=211 Identities=13% Similarity=0.037 Sum_probs=143.8
Q ss_pred CCc-eEEEECCCCh-h--HHHHHHHHhhhhcCCCCCeEEEEecCCchh--------hhHHHHHHhccCEEEEeCHHHHHH
Q 046057 830 FHP-DIIHCHDWSS-A--PVAWLFKDHYVHYGLSKARIVFTIHNLEFG--------THHIGKAMTYADKATTVSHTYSKE 897 (1198)
Q Consensus 830 ~~P-DVIH~Hdw~t-a--~va~llk~~y~~~gl~~ipvV~tIHn~~~~--------~~li~~~~~~AD~VitVS~~~a~e 897 (1198)
.++ ||||+|.... + +...++.... .. ++|+|+++|+..+. ..+....++.||.++++|+.+.+.
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k---~~-~~k~i~~ihD~~~~~~~~~~~~~~~~~~~~~~aD~iI~~S~~~~~~ 137 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLK---KK-QVKIIILIHDIEPLRFDSNYYLMKEEIDMLNLADVLIVHSKKMKDR 137 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHH---Hc-CCEEEEEECCcHHHhccccchhhHHHHHHHHhCCEEEECCHHHHHH
Confidence 466 9999986322 1 1122222211 11 69999999998764 234566788999999999999999
Q ss_pred HhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCH
Q 046057 898 VAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGI 977 (1198)
Q Consensus 898 l~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGi 977 (1198)
+...+ ....++.+++|..+.....+ +. .+ ...+.|+|+|+|....++
T Consensus 138 l~~~g---~~~~~i~~~~~~~~~~~~~~--------------------------~~---~~-~~~~~i~yaG~l~k~~~l 184 (333)
T PRK09814 138 LVEEG---LTTDKIIVQGIFDYLNDIEL--------------------------VK---TP-SFQKKINFAGNLEKSPFL 184 (333)
T ss_pred HHHcC---CCcCceEecccccccccccc--------------------------cc---cc-cCCceEEEecChhhchHH
Confidence 97543 23346655544332211000 00 00 134689999999843221
Q ss_pred HHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCC------
Q 046057 978 HLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIF------ 1051 (1198)
Q Consensus 978 dlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~------ 1051 (1198)
.+ ..++++|+|+|+|+... .. .++|.|+|.++.+++..+|+. |+.+++..-
T Consensus 185 ---~~-----~~~~~~l~i~G~g~~~~------------~~--~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~ 241 (333)
T PRK09814 185 ---KN-----WSQGIKLTVFGPNPEDL------------EN--SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEY 241 (333)
T ss_pred ---Hh-----cCCCCeEEEECCCcccc------------cc--CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccc
Confidence 11 23578999999986421 11 468999999999999999988 776665321
Q ss_pred -----CCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1052 -----EPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1052 -----EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
-.+|-.+.++|++|+|+|+++.+++.|+|.++ .+|++++ +.++++++|.
T Consensus 242 ~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~-------------~~G~~v~--~~~el~~~l~ 295 (333)
T PRK09814 242 GEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVEN-------------GLGFVVD--SLEELPEIID 295 (333)
T ss_pred hhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhC-------------CceEEeC--CHHHHHHHHH
Confidence 14566788999999999999999999999987 8999998 6778886665
No 97
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.57 E-value=2.9e-12 Score=143.20 Aligned_cols=234 Identities=18% Similarity=0.132 Sum_probs=165.5
Q ss_pred CCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhhHHH---------------------------HHH
Q 046057 829 GFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIG---------------------------KAM 881 (1198)
Q Consensus 829 ~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~li~---------------------------~~~ 881 (1198)
.+.|||.+-.-..+.-.|.+ +. +.++|++...|-......+++ .+-
T Consensus 148 r~~Pdi~IDtMGY~fs~p~~-r~------l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~~~G 220 (465)
T KOG1387|consen 148 RFPPDIFIDTMGYPFSYPIF-RR------LRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQSAG 220 (465)
T ss_pred hCCchheEecCCCcchhHHH-HH------HccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 36899987542222222222 21 348999999997654322111 122
Q ss_pred hccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCC
Q 046057 882 TYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSD 961 (1198)
Q Consensus 882 ~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d 961 (1198)
..||.+.|.|......+..-. + ..++.+|+...+.+.| .+..+-.+.+
T Consensus 221 ~~ad~vm~NssWT~nHI~qiW--~--~~~~~iVyPPC~~e~l----------------------------ks~~~te~~r 268 (465)
T KOG1387|consen 221 SKADIVMTNSSWTNNHIKQIW--Q--SNTCSIVYPPCSTEDL----------------------------KSKFGTEGER 268 (465)
T ss_pred ccceEEEecchhhHHHHHHHh--h--ccceeEEcCCCCHHHH----------------------------HHHhcccCCc
Confidence 568999999999888876311 1 1356666655554322 2222222346
Q ss_pred CcEEEEEecCCCccCHH-HHHHHHHHhhcC------CcEEEEEecCCC---hhhHHHHHHHHHHhCCCCCCcEEEEccCC
Q 046057 962 LPLVGIITRLTHQKGIH-LIKHAIWRTLDR------GGQVVLLGSAPD---PRIQNDFVNLANELHSSHADRARLCLTYD 1031 (1198)
Q Consensus 962 ~plIg~VGRL~~qKGid-lIleAl~~ll~~------~~qLVIvGsgpd---p~i~~~L~~la~eLgl~~~drV~f~g~~d 1031 (1198)
.+.++++|.+.|+|+.. +=+.|+....++ +++|+|+|+... .+.-..|+.++++|++ +.+|.|....+
T Consensus 269 ~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i--~~~v~F~~N~P 346 (465)
T KOG1387|consen 269 ENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKI--PKHVQFEKNVP 346 (465)
T ss_pred ceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCC--ccceEEEecCC
Confidence 78999999999999999 445566555432 589999998643 3344567889998888 57899999999
Q ss_pred hHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccc-ccccccccchhhhhccCCCCcEEEEcCCCHHHH
Q 046057 1032 EPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLY-DTVFDVDHDKERAQALDLEPNGFSFDGADIAGV 1110 (1198)
Q Consensus 1032 ~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~-E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~L 1110 (1198)
-+.+-.+|..|-+.|..=..|-||+.+.|+||.|+.||+.+.||+. |+|.+.| +..+||+.. +.++.
T Consensus 347 y~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~----------G~~tGFla~--t~~EY 414 (465)
T KOG1387|consen 347 YEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWD----------GETTGFLAP--TDEEY 414 (465)
T ss_pred HHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccC----------CccceeecC--ChHHH
Confidence 9999999999999999998999999999999999999998888765 7777753 348999983 45667
Q ss_pred HHHHh
Q 046057 1111 DYALN 1115 (1198)
Q Consensus 1111 a~AL~ 1115 (1198)
++++-
T Consensus 415 aE~iL 419 (465)
T KOG1387|consen 415 AEAIL 419 (465)
T ss_pred HHHHH
Confidence 77666
No 98
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.37 E-value=1.2e-10 Score=136.59 Aligned_cols=215 Identities=14% Similarity=0.025 Sum_probs=136.4
Q ss_pred HHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCc--hhhhHHHHHHhccCEEEEeCHHHH
Q 046057 818 CHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLE--FGTHHIGKAMTYADKATTVSHTYS 895 (1198)
Q Consensus 818 ~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~--~~~~li~~~~~~AD~VitVS~~~a 895 (1198)
...+.+++++ .+||+|+++|..+..+....+.+. .++|+|+.+.--. +..+..+...+++|.+++.++...
T Consensus 78 ~~~~~~~l~~--~kPd~vi~~g~~~~~~~~a~aa~~-----~gip~v~~i~P~~waw~~~~~r~l~~~~d~v~~~~~~e~ 150 (385)
T TIGR00215 78 RKEVVQLAKQ--AKPDLLVGIDAPDFNLTKELKKKD-----PGIKIIYYISPQVWAWRKWRAKKIEKATDFLLAILPFEK 150 (385)
T ss_pred HHHHHHHHHh--cCCCEEEEeCCCCccHHHHHHHhh-----CCCCEEEEeCCcHhhcCcchHHHHHHHHhHhhccCCCcH
Confidence 3445555555 589999999964444333222222 2899986652111 123334555678999999999888
Q ss_pred HHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEE--ecCCC
Q 046057 896 KEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGII--TRLTH 973 (1198)
Q Consensus 896 ~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~V--GRL~~ 973 (1198)
+.+...+ .+...+.|++-....... ..+...++++|++ ++.++|+++ +|..+
T Consensus 151 ~~~~~~g------~~~~~vGnPv~~~~~~~~-------------------~~~~~~r~~lgl~-~~~~~Ilvl~GSR~ae 204 (385)
T TIGR00215 151 AFYQKKN------VPCRFVGHPLLDAIPLYK-------------------PDRKSAREKLGID-HNGETLALLPGSRGSE 204 (385)
T ss_pred HHHHhcC------CCEEEECCchhhhccccC-------------------CCHHHHHHHcCCC-CCCCEEEEECCCCHHH
Confidence 7775322 244556666532211000 0133457788987 466766655 37766
Q ss_pred -ccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCC
Q 046057 974 -QKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSI 1050 (1198)
Q Consensus 974 -qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~ 1050 (1198)
.|++..+++|+..+.+ ++.++++.+.. . .....++++..+++. +.++.++.. ....+|++||++|++|
T Consensus 205 i~k~~~~ll~a~~~l~~~~p~~~~vi~~~~-~-~~~~~~~~~~~~~~~--~~~v~~~~~----~~~~~l~aADl~V~~S- 275 (385)
T TIGR00215 205 VEKLFPLFLKAAQLLEQQEPDLRRVLPVVN-F-KRRLQFEQIKAEYGP--DLQLHLIDG----DARKAMFAADAALLAS- 275 (385)
T ss_pred HHHhHHHHHHHHHHHHHhCCCeEEEEEeCC-c-hhHHHHHHHHHHhCC--CCcEEEECc----hHHHHHHhCCEEeecC-
Confidence 7899999999988864 36778775543 1 124566777776665 345666543 2357999999999999
Q ss_pred CCCCcHHHHHHHHhCCcEEEe-CCccccc
Q 046057 1051 FEPCGLTQLVAMRYGSIPVVR-KTGGLYD 1078 (1198)
Q Consensus 1051 ~EpfGLt~LEAMa~G~PvIvt-~tGGl~E 1078 (1198)
|.+.+|||++|+|+|+. ++..+.-
T Consensus 276 ----Gt~tlEa~a~G~P~Vv~yk~~pl~~ 300 (385)
T TIGR00215 276 ----GTAALEAALIKTPMVVGYRMKPLTF 300 (385)
T ss_pred ----CHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 88888999999998885 4444443
No 99
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.36 E-value=3.1e-11 Score=144.79 Aligned_cols=251 Identities=17% Similarity=0.171 Sum_probs=153.6
Q ss_pred CCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---------hhHHHHHHhccCEEEEeCHHHHHHHhC
Q 046057 830 FHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG---------THHIGKAMTYADKATTVSHTYSKEVAG 900 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~---------~~li~~~~~~AD~VitVS~~~a~el~~ 900 (1198)
..-|+|..||.+..++|.+++... .+.++.|..|...+. +.-+-.+|-.||.|-..+..+++.+..
T Consensus 140 ~~~D~VWVhDYhL~llP~~LR~~~-----~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~ 214 (474)
T PF00982_consen 140 RPGDLVWVHDYHLMLLPQMLRERG-----PDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLS 214 (474)
T ss_dssp -TT-EEEEESGGGTTHHHHHHHTT-------SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHH
T ss_pred cCCCEEEEeCCcHHHHHHHHHhhc-----CCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHH
Confidence 356899999999999999998765 478999999998754 334556788999999999999888753
Q ss_pred C-----C--------CC--CCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEE
Q 046057 901 D-----P--------AI--APHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLV 965 (1198)
Q Consensus 901 ~-----~--------~l--~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plI 965 (1198)
. + .+ ..+.-++.+.|-|||++.+.... .. +.-......|+++++ .+..+|
T Consensus 215 ~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~--------~~----~~v~~~~~~l~~~~~---~~~~ii 279 (474)
T PF00982_consen 215 CCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLA--------RS----PEVQERAEELREKFK---GKRKII 279 (474)
T ss_dssp HHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHH--------H-----S---HHHHHHHHHTT---T-SEEE
T ss_pred HHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhc--------cC----hHHHHHHHHHHHhcC---CCcEEE
Confidence 1 0 11 12233456678888876543100 00 001112345777774 235899
Q ss_pred EEEecCCCccCHHHHHHHHHHhhcC------CcEEEEEecCCC--h----hhHHHHHHHHHHhCCCCCC----cEEE-Ec
Q 046057 966 GIITRLTHQKGIHLIKHAIWRTLDR------GGQVVLLGSAPD--P----RIQNDFVNLANELHSSHAD----RARL-CL 1028 (1198)
Q Consensus 966 g~VGRL~~qKGidlIleAl~~ll~~------~~qLVIvGsgpd--p----~i~~~L~~la~eLgl~~~d----rV~f-~g 1028 (1198)
+.+.|++..||+..=+.|+.+++++ .+.|+-++.... . .++..+.+++.+.+.+|+. -|.+ ..
T Consensus 280 ~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~ 359 (474)
T PF00982_consen 280 VGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYR 359 (474)
T ss_dssp EEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S
T ss_pred EEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEec
Confidence 9999999999999999999999852 356665554211 1 2556667777665544332 1444 44
Q ss_pred cCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCc----EEEeCCccccccccccccchhhhhccCCCCcEEEEcC
Q 046057 1029 TYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSI----PVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDG 1104 (1198)
Q Consensus 1029 ~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~P----vIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~ 1104 (1198)
.++.+++..+|+.||++|++|..+|.-|+..|..+|... +|.|...|..+.+.++ .++|.|
T Consensus 360 ~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~---------------al~VNP 424 (474)
T PF00982_consen 360 SLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEA---------------ALLVNP 424 (474)
T ss_dssp ---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS----------------EEE-T
T ss_pred CCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCc---------------cEEECC
Confidence 588899999999999999999999999999999998543 6778888888887653 589999
Q ss_pred CCHHHHHHHHh
Q 046057 1105 ADIAGVDYALN 1115 (1198)
Q Consensus 1105 ~D~~~La~AL~ 1115 (1198)
.|++++++||.
T Consensus 425 ~d~~~~A~ai~ 435 (474)
T PF00982_consen 425 WDIEEVADAIH 435 (474)
T ss_dssp T-HHHHHHHHH
T ss_pred CChHHHHHHHH
Confidence 99999999999
No 100
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.34 E-value=1.1e-11 Score=124.94 Aligned_cols=158 Identities=27% Similarity=0.330 Sum_probs=91.8
Q ss_pred ccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCC
Q 046057 716 AVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQ 795 (1198)
Q Consensus 716 s~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~ 795 (1198)
+..+.+ ..||+++++.+|+++|+++||+|+|+++......... .........
T Consensus 4 ~~~~~~--~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~--------------------------~~~~~~~~~ 55 (177)
T PF13439_consen 4 TNIFLP--NIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE--------------------------LVKIFVKIP 55 (177)
T ss_dssp ECC-TT--SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST--------------------------EEEE---TT
T ss_pred EEecCC--CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh--------------------------ccceeeeee
Confidence 344445 5899999999999999999999999998744321100 000000000
Q ss_pred CCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh--
Q 046057 796 NGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG-- 873 (1198)
Q Consensus 796 ~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~-- 873 (1198)
+.......+.......+.+++++. +|||||+|.+.....+.+... ++|+|+++|+....
T Consensus 56 ---------~~~~~~~~~~~~~~~~~~~~i~~~--~~DiVh~~~~~~~~~~~~~~~--------~~~~v~~~H~~~~~~~ 116 (177)
T PF13439_consen 56 ---------YPIRKRFLRSFFFMRRLRRLIKKE--KPDIVHIHGPPAFWIALLACR--------KVPIVYTIHGPYFERR 116 (177)
T ss_dssp ----------SSTSS--HHHHHHHHHHHHHHHH--T-SEEECCTTHCCCHHHHHHH--------CSCEEEEE-HHH--HH
T ss_pred ---------cccccccchhHHHHHHHHHHHHHc--CCCeEEecccchhHHHHHhcc--------CCCEEEEeCCCccccc
Confidence 000011122334445666777664 899999998654433332221 68999999997731
Q ss_pred -------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCC
Q 046057 874 -------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMW 923 (1198)
Q Consensus 874 -------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~ 923 (1198)
...+......+|.++++|+..++++.. ++....++.+|+||||.+.|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~---~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 117 FLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK---FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp TTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH---HT--SS-EEE----B-CCCH
T ss_pred ccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH---hCCcccCCEEEECCccHHHc
Confidence 112334467899999999999999974 44566899999999999876
No 101
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.34 E-value=6.1e-12 Score=123.94 Aligned_cols=125 Identities=22% Similarity=0.253 Sum_probs=90.6
Q ss_pred CcEEEEEecCCCccCHHHHHH-HHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHH
Q 046057 962 LPLVGIITRLTHQKGIHLIKH-AIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLI 1038 (1198)
Q Consensus 962 ~plIg~VGRL~~qKGidlIle-Al~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~i 1038 (1198)
.++|+++|++.+.||++.+++ |+.++.+ ++++|+|+|.+|+ .++++ . ..+|++++.+ +++..+
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~-----~l~~~-~------~~~v~~~g~~--~e~~~~ 67 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD-----ELKRL-R------RPNVRFHGFV--EELPEI 67 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS------HHCCH-H------HCTEEEE-S---HHHHHH
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH-----HHHHh-c------CCCEEEcCCH--HHHHHH
Confidence 468999999999999999999 9888864 5799999999864 24444 1 2589999998 467999
Q ss_pred HHHccEEEEcCC-CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1039 YAGADFILVPSI-FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1039 yA~ADi~LvPS~-~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
++.||++|+|+. .++++.+++|||++|+|+|+++. +..+++... ..|+++ .+|+++++++|.
T Consensus 68 l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~-------------~~~~~~-~~~~~~l~~~i~ 130 (135)
T PF13692_consen 68 LAAADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEED-------------GCGVLV-ANDPEELAEAIE 130 (135)
T ss_dssp HHC-SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS----------------SEEEE--TT-HHHHHHHHH
T ss_pred HHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeec-------------CCeEEE-CCCHHHHHHHHH
Confidence 999999999996 67899999999999999999998 666766543 568787 889999998887
No 102
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.33 E-value=1.4e-10 Score=138.15 Aligned_cols=297 Identities=14% Similarity=0.094 Sum_probs=206.8
Q ss_pred HHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---------hhHHHHHHhccCE
Q 046057 816 FFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG---------THHIGKAMTYADK 886 (1198)
Q Consensus 816 ~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~---------~~li~~~~~~AD~ 886 (1198)
.|+.++.+.+. .-|+|-+||.+..++|.+++... ...++-|.+|..... +.-+-.+|-.+|.
T Consensus 112 ~FA~~v~~~~~----~~D~VWVHDYhL~llp~~LR~~~-----~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDl 182 (474)
T PRK10117 112 LLADKLLPLLK----DDDIIWIHDYHLLPFASELRKRG-----VNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDL 182 (474)
T ss_pred HHHHHHHHhcC----CCCEEEEeccHhhHHHHHHHHhC-----CCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCcc
Confidence 44454444432 34899999999999999998764 378999999987654 3344567889999
Q ss_pred EEEeCHHHHHHHhCC-----C--C-------CCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHH
Q 046057 887 ATTVSHTYSKEVAGD-----P--A-------IAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQ 952 (1198)
Q Consensus 887 VitVS~~~a~el~~~-----~--~-------l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLr 952 (1198)
|-.-++.+++.+... + . +..+.-++...|-|||++.|.-... . + .......++
T Consensus 183 IGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~--------~----~-~~~~~~~lr 249 (474)
T PRK10117 183 LGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAA--------G----P-LPPKLAQLK 249 (474)
T ss_pred ceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhh--------c----h-HHHHHHHHH
Confidence 999999998776530 0 0 0112234666788888876532100 0 0 111234566
Q ss_pred HHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC------CcEEEEEecCCC------hhhHHHHHHHHHHhCCCC
Q 046057 953 QKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR------GGQVVLLGSAPD------PRIQNDFVNLANELHSSH 1020 (1198)
Q Consensus 953 q~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~------~~qLVIvGsgpd------p~i~~~L~~la~eLgl~~ 1020 (1198)
++++ ++.+|+.|.||+..||+..=+.|+.+++++ .+.|+-+..... ..++..+++++.+.+-++
T Consensus 250 ~~~~----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~f 325 (474)
T PRK10117 250 AELK----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKY 325 (474)
T ss_pred HHcC----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhcc
Confidence 6664 567999999999999999999999999863 344554543211 235667777777776655
Q ss_pred CC----cEEEE-ccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCC-----cEEEeCCccccccccccccchhhh
Q 046057 1021 AD----RARLC-LTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGS-----IPVVRKTGGLYDTVFDVDHDKERA 1090 (1198)
Q Consensus 1021 ~d----rV~f~-g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~-----PvIvt~tGGl~E~V~d~d~~~~~~ 1090 (1198)
.. =|+++ ..++.+++..+|+.||+++++|..+|.-|+..|..+|-. +.|.|..-|..+.+.+
T Consensus 326 g~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~~-------- 397 (474)
T PRK10117 326 GQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS-------- 397 (474)
T ss_pred CCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchHHHhCC--------
Confidence 42 13332 357888899999999999999999999999999998854 4666777777777642
Q ss_pred hccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCH-HHHH
Q 046057 1091 QALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGR-EWLN 1169 (1198)
Q Consensus 1091 ~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~-e~~~ 1169 (1198)
.++|+|.|.+++++||. +|+.+-.+.+ ..++
T Consensus 398 --------AllVNP~d~~~~A~Ai~----------------------------------------~AL~Mp~~Er~~R~~ 429 (474)
T PRK10117 398 --------ALIVNPYDRDEVAAALD----------------------------------------RALTMPLAERISRHA 429 (474)
T ss_pred --------CeEECCCCHHHHHHHHH----------------------------------------HHHcCCHHHHHHHHH
Confidence 78999999999999999 8887743322 3333
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHH
Q 046057 1170 SLCKTVMEQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1170 ~L~~~am~qdfSW~~~A~~yielY~~a 1196 (1198)
.|.+.. ..++....++.+++-+..+
T Consensus 430 ~l~~~v--~~~dv~~W~~~fL~~L~~~ 454 (474)
T PRK10117 430 EMLDVI--VKNDINHWQECFISDLKQI 454 (474)
T ss_pred HHHHHh--hhCCHHHHHHHHHHHHHHh
Confidence 444443 3468888888888766543
No 103
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.33 E-value=1.2e-10 Score=141.53 Aligned_cols=168 Identities=15% Similarity=0.086 Sum_probs=140.1
Q ss_pred CcEEEEEe--cCCCccCHHHHHHHHHHhh--cCCcEEEEEecCCChhhHHHHHHHHHHhCCCC-----------------
Q 046057 962 LPLVGIIT--RLTHQKGIHLIKHAIWRTL--DRGGQVVLLGSAPDPRIQNDFVNLANELHSSH----------------- 1020 (1198)
Q Consensus 962 ~plIg~VG--RL~~qKGidlIleAl~~ll--~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~----------------- 1020 (1198)
...+++++ || ++|-++.+++|+..+. .++++|.+.|.+.+......++++++++++.+
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 397 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQP 397 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhh
Confidence 34678888 99 9999999999999995 46899999998743345677777777775530
Q ss_pred ----------CCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhh
Q 046057 1021 ----------ADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERA 1090 (1198)
Q Consensus 1021 ----------~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~ 1090 (1198)
+++|.|.+..++..+...|..+.++|.+|..|+|+ +++|||+.|+|.| .-|..++|.++
T Consensus 398 ~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~------- 466 (519)
T TIGR03713 398 ILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHN------- 466 (519)
T ss_pred cccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcC-------
Confidence 15888888778767889999999999999999999 9999999999999 66779999998
Q ss_pred hccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHH
Q 046057 1091 QALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNS 1170 (1198)
Q Consensus 1091 ~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~ 1170 (1198)
.||+++ +|..+|+ +||..++.++..|++
T Consensus 467 ------~NG~li--~d~~~l~--------------------------------------------~al~~~L~~~~~wn~ 494 (519)
T TIGR03713 467 ------KNGYII--DDISELL--------------------------------------------KALDYYLDNLKNWNY 494 (519)
T ss_pred ------CCcEEe--CCHHHHH--------------------------------------------HHHHHHHhCHHHHHH
Confidence 999999 7899998 555567788988899
Q ss_pred HHHHH--HHhcCChHHHHHHHHHHH
Q 046057 1171 LCKTV--MEQDWSWNRPALDYMELY 1193 (1198)
Q Consensus 1171 L~~~a--m~qdfSW~~~A~~yielY 1193 (1198)
+...+ ..++||-+.+..++.+++
T Consensus 495 ~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 495 SLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 98888 447899999998887753
No 104
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.30 E-value=1.4e-11 Score=122.05 Aligned_cols=150 Identities=22% Similarity=0.249 Sum_probs=86.2
Q ss_pred CcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCCCCcccccccc
Q 046057 726 GGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGCVY 805 (1198)
Q Consensus 726 GGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~~~f~rg~iY 805 (1198)
||+++++..|+++|+++||+|+|+++........ ....|+.++.++..... ...
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~----~~~ 54 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRP----WPL 54 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SS----SGG
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccc----hhh
Confidence 8999999999999999999999999874432110 11245566555432110 000
Q ss_pred CCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh----------hh
Q 046057 806 GCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG----------TH 875 (1198)
Q Consensus 806 g~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~----------~~ 875 (1198)
. ..+ +...+.+++.....+|||||+|++..++++.+++... ++|+|+++|+..+. ..
T Consensus 55 ~----~~~---~~~~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~------~~p~v~~~h~~~~~~~~~~~~~~~~~ 121 (160)
T PF13579_consen 55 R----LLR---FLRRLRRLLAARRERPDVVHAHSPTAGLVAALARRRR------GIPLVVTVHGTLFRRGSRWKRRLYRW 121 (160)
T ss_dssp G----HCC---HHHHHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHH------T--EEEE-SS-T------HHHHHHHH
T ss_pred h----hHH---HHHHHHHHHhhhccCCeEEEecccchhHHHHHHHHcc------CCcEEEEECCCchhhccchhhHHHHH
Confidence 0 011 2233344443334699999999987777777766443 89999999996432 12
Q ss_pred HHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCC
Q 046057 876 HIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNG 917 (1198)
Q Consensus 876 li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NG 917 (1198)
+.+..+..||.++++|+..++.+.. ++....++.+||||
T Consensus 122 ~~~~~~~~ad~vi~~S~~~~~~l~~---~g~~~~ri~vipnG 160 (160)
T PF13579_consen 122 LERRLLRRADRVIVVSEAMRRYLRR---YGVPPDRIHVIPNG 160 (160)
T ss_dssp HHHHHHHH-SEEEESSHHHHHHHHH---H---GGGEEE----
T ss_pred HHHHHHhcCCEEEECCHHHHHHHHH---hCCCCCcEEEeCcC
Confidence 3456778899999999999999974 44567899999998
No 105
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.27 E-value=3.6e-10 Score=143.78 Aligned_cols=262 Identities=14% Similarity=0.127 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---------hhHHHHHHhccCE
Q 046057 816 FFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG---------THHIGKAMTYADK 886 (1198)
Q Consensus 816 ~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~---------~~li~~~~~~AD~ 886 (1198)
.|+.++.+.+.. .-|+|..||.+..++|.+++... ...++-|..|...+. +.-+-.+|-.||.
T Consensus 189 ~FA~~v~~~~~~---~~d~VWVhDYhL~llP~~LR~~~-----~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDl 260 (854)
T PLN02205 189 IFADRIMEVINP---EDDFVWIHDYHLMVLPTFLRKRF-----NRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDL 260 (854)
T ss_pred HHHHHHHHHhCC---CCCEEEEeCchhhHHHHHHHhhC-----CCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCe
Confidence 455565555432 12899999999999999998764 478999999998654 3344567889999
Q ss_pred EEEeCHHHHHHHhCC-----CC--------C----CCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHH
Q 046057 887 ATTVSHTYSKEVAGD-----PA--------I----APHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKE 949 (1198)
Q Consensus 887 VitVS~~~a~el~~~-----~~--------l----~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~ 949 (1198)
|-.....|++.+... +. + ..+.-++.+.|-|||++.|.-... . +.......
T Consensus 261 IGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~--------~----~~~~~~~~ 328 (854)
T PLN02205 261 IGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLS--------L----PETEAKVK 328 (854)
T ss_pred EEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhc--------C----hhHHHHHH
Confidence 999999999887641 00 0 112334566788888766532100 0 01112234
Q ss_pred HHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC------CcEEEEEecCC-----C-hhhHHHHHHHHHHhC
Q 046057 950 ALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR------GGQVVLLGSAP-----D-PRIQNDFVNLANELH 1017 (1198)
Q Consensus 950 aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~------~~qLVIvGsgp-----d-p~i~~~L~~la~eLg 1017 (1198)
.++++++- .++.+|+.|.||+..||+..=+.|+.+++++ .+.||-+.... + ..++..+.+++.+.+
T Consensus 329 ~l~~~~~~--~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN 406 (854)
T PLN02205 329 ELIKQFCD--QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRIN 406 (854)
T ss_pred HHHHHhcc--CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHH
Confidence 57777752 2567999999999999999999999999863 24454444321 1 135566677777766
Q ss_pred CCCCC----cEEEE-ccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCC-------------------cEEEeCC
Q 046057 1018 SSHAD----RARLC-LTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGS-------------------IPVVRKT 1073 (1198)
Q Consensus 1018 l~~~d----rV~f~-g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~-------------------PvIvt~t 1073 (1198)
-++.. -|+++ ..++.+++..+|+.||++|++|..++.-|+..|..+|.. +.|.|..
T Consensus 407 ~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEf 486 (854)
T PLN02205 407 ETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEF 486 (854)
T ss_pred hhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeec
Confidence 55432 24554 457888999999999999999999999999999987632 3555666
Q ss_pred ccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1074 GGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1074 GGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
-|....+. + .++|.|.|++++++||.
T Consensus 487 aGaa~~L~-~---------------Ai~VNP~d~~~~a~ai~ 512 (854)
T PLN02205 487 IGCSPSLS-G---------------AIRVNPWNIDAVADAMD 512 (854)
T ss_pred cchhHHhC-c---------------CeEECCCCHHHHHHHHH
Confidence 55555553 2 78999999999999999
No 106
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.16 E-value=1e-08 Score=122.26 Aligned_cols=295 Identities=18% Similarity=0.194 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhh---------hHHHHHHhccCE
Q 046057 816 FFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGT---------HHIGKAMTYADK 886 (1198)
Q Consensus 816 ~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~---------~li~~~~~~AD~ 886 (1198)
.|+.++.+..+ +=|+|..||.+..++|.+++... ...++.|.+|-..... .-|-.++-.||.
T Consensus 136 ~FAd~i~~~~~----~gDiIWVhDYhL~L~P~mlR~~~-----~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dl 206 (486)
T COG0380 136 KFADKIVEIYE----PGDIIWVHDYHLLLVPQMLRERI-----PDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADL 206 (486)
T ss_pred HHHHHHHHhcC----CCCEEEEEechhhhhHHHHHHhC-----CCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCe
Confidence 44444444443 34999999999999999998875 3679999999887653 344467789999
Q ss_pred EEEeCHHHHHHHhCC------------CCCC---CCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchH--HHHH
Q 046057 887 ATTVSHTYSKEVAGD------------PAIA---PHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKR--AAKE 949 (1198)
Q Consensus 887 VitVS~~~a~el~~~------------~~l~---~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~--~~k~ 949 (1198)
|-.-.+.|+..+... ...+ .+..++..+|=|||+..|.-.. .++. ..-.
T Consensus 207 igFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~--------------~~~~v~~~~~ 272 (486)
T COG0380 207 IGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERAL--------------KSPSVQEKVL 272 (486)
T ss_pred eEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhh--------------cCCchhhHHH
Confidence 999999998876530 0111 2335677789999987654210 1111 1234
Q ss_pred HHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC------CcEEEEEecCCChh------hHHHHHHHHHHhC
Q 046057 950 ALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR------GGQVVLLGSAPDPR------IQNDFVNLANELH 1017 (1198)
Q Consensus 950 aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~------~~qLVIvGsgpdp~------i~~~L~~la~eLg 1017 (1198)
++++.++ .++.+|+.+-||+.-||+..=+.|+.+++.. .+.|+-++...... ++..+++++.+.+
T Consensus 273 el~~~~~---~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN 349 (486)
T COG0380 273 ELKAELG---RNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRIN 349 (486)
T ss_pred HHHHHhc---CCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHH
Confidence 5556664 2377999999999999999999999999943 34455555432222 3445556665554
Q ss_pred CCCC-----CcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhC----CcEEEeCCccccccccccccchh
Q 046057 1018 SSHA-----DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYG----SIPVVRKTGGLYDTVFDVDHDKE 1088 (1198)
Q Consensus 1018 l~~~-----drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G----~PvIvt~tGGl~E~V~d~d~~~~ 1088 (1198)
..++ .-..|.-.++.+++..+|..||+++++|..|+.-|+..|..+|- -|.|.|..-|....+.+
T Consensus 350 ~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~------ 423 (486)
T COG0380 350 GEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD------ 423 (486)
T ss_pred hhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc------
Confidence 4332 22333345789999999999999999999999999999988762 25666666666666643
Q ss_pred hhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCH-HH
Q 046057 1089 RAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGR-EW 1167 (1198)
Q Consensus 1089 ~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~-e~ 1167 (1198)
.+++.|.|.+.++++|. +||.+-.+.+ +.
T Consensus 424 ----------AliVNP~d~~~va~ai~----------------------------------------~AL~m~~eEr~~r 453 (486)
T COG0380 424 ----------ALIVNPWDTKEVADAIK----------------------------------------RALTMSLEERKER 453 (486)
T ss_pred ----------CEeECCCChHHHHHHHH----------------------------------------HHhcCCHHHHHHH
Confidence 68999999999999999 8887643322 33
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHH
Q 046057 1168 LNSLCKTVMEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1168 ~~~L~~~am~qdfSW~~~A~~yielY~ 1194 (1198)
+..|.+.. .+.+.++.+..++.-+.
T Consensus 454 ~~~~~~~v--~~~d~~~W~~~fl~~la 478 (486)
T COG0380 454 HEKLLKQV--LTHDVARWANSFLDDLA 478 (486)
T ss_pred HHHHHHHH--HhhhHHHHHHHHHHHHH
Confidence 34444444 34677777777766443
No 107
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.03 E-value=2.9e-07 Score=107.14 Aligned_cols=261 Identities=13% Similarity=0.099 Sum_probs=138.4
Q ss_pred CCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCCCCcccccc
Q 046057 724 KVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGC 803 (1198)
Q Consensus 724 kvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~~~f~rg~ 803 (1198)
.+||--.=..+++++|+++||+|.+++..++... . + ....|++++.+... ++ .+.
T Consensus 10 GTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~-~-------------------l--~~~~g~~~~~~~~~-~l-~~~- 64 (352)
T PRK12446 10 GSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEK-T-------------------I--IEKENIPYYSISSG-KL-RRY- 64 (352)
T ss_pred CcHHHHHHHHHHHHHHHhCCCEEEEEECCCcccc-c-------------------c--CcccCCcEEEEecc-Cc-CCC-
Confidence 3555555567788999999999999985533210 0 0 01124444444321 11 110
Q ss_pred ccCCCCchhhHHH---HHH---HHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhhHH
Q 046057 804 VYGCNNDKERFAF---FCH---AALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHI 877 (1198)
Q Consensus 804 iYg~~dd~~Rf~~---F~~---aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~li 877 (1198)
.....+.. +.. .++.++++ ++|||||++.-..+..+.+..... ++|++++..|...+. .-
T Consensus 65 -----~~~~~~~~~~~~~~~~~~~~~i~~~--~kPdvvi~~Ggy~s~p~~~aa~~~------~~p~~i~e~n~~~g~-~n 130 (352)
T PRK12446 65 -----FDLKNIKDPFLVMKGVMDAYVRIRK--LKPDVIFSKGGFVSVPVVIGGWLN------RVPVLLHESDMTPGL-AN 130 (352)
T ss_pred -----chHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEecCchhhHHHHHHHHHc------CCCEEEECCCCCccH-HH
Confidence 01111111 122 22333443 699999998755443333333332 889887776654431 22
Q ss_pred HHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCC
Q 046057 878 GKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGL 957 (1198)
Q Consensus 878 ~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL 957 (1198)
+....+++++.+.-+.....+ ...++.++-|-|..++..+ .+...++.+++
T Consensus 131 r~~~~~a~~v~~~f~~~~~~~--------~~~k~~~tG~Pvr~~~~~~---------------------~~~~~~~~~~l 181 (352)
T PRK12446 131 KIALRFASKIFVTFEEAAKHL--------PKEKVIYTGSPVREEVLKG---------------------NREKGLAFLGF 181 (352)
T ss_pred HHHHHhhCEEEEEccchhhhC--------CCCCeEEECCcCCcccccc---------------------cchHHHHhcCC
Confidence 344567888876544433222 1235554434444332111 12344567888
Q ss_pred CCCCCcEEEEE-ecCCCccCH-HHHHHHHHHhhcCCcEEEE-EecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHH
Q 046057 958 RKSDLPLVGII-TRLTHQKGI-HLIKHAIWRTLDRGGQVVL-LGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPL 1034 (1198)
Q Consensus 958 ~~~d~plIg~V-GRL~~qKGi-dlIleAl~~ll~~~~qLVI-vGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~ 1034 (1198)
++ +.++|+++ |.+. -+.+ +.+.+++..+. .++++++ +|.. ++.+....+ .++... .|-.+.
T Consensus 182 ~~-~~~~iLv~GGS~G-a~~in~~~~~~l~~l~-~~~~vv~~~G~~-------~~~~~~~~~-----~~~~~~-~f~~~~ 245 (352)
T PRK12446 182 SR-KKPVITIMGGSLG-AKKINETVREALPELL-LKYQIVHLCGKG-------NLDDSLQNK-----EGYRQF-EYVHGE 245 (352)
T ss_pred CC-CCcEEEEECCccc-hHHHHHHHHHHHHhhc-cCcEEEEEeCCc-------hHHHHHhhc-----CCcEEe-cchhhh
Confidence 73 56666555 4443 2334 33444554443 3477766 4542 122222111 122333 443344
Q ss_pred HHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeC
Q 046057 1035 SHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRK 1072 (1198)
Q Consensus 1035 l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~ 1072 (1198)
+..+|+.||++|.= +-+.|+.|++++|+|.|.-.
T Consensus 246 m~~~~~~adlvIsr----~G~~t~~E~~~~g~P~I~iP 279 (352)
T PRK12446 246 LPDILAITDFVISR----AGSNAIFEFLTLQKPMLLIP 279 (352)
T ss_pred HHHHHHhCCEEEEC----CChhHHHHHHHcCCCEEEEc
Confidence 68899999999954 45789999999999999873
No 108
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=98.97 E-value=4.8e-08 Score=120.73 Aligned_cols=372 Identities=20% Similarity=0.227 Sum_probs=227.5
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcc--cccccc------------------------ccccccc-C
Q 046057 720 APIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKF--SDVKDL------------------------GYNRSYH-W 772 (1198)
Q Consensus 720 ~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~--~~~~~l------------------------~~~~~~~-~ 772 (1198)
-|... ||||+....-..++++.|...+.+...|..--. ....+- .....+. +
T Consensus 110 ~p~lg-GGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~ 188 (750)
T COG0058 110 DPGLG-GGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGY 188 (750)
T ss_pred Ccccc-ccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEec
Confidence 34434 999999999999999999988888765432111 100000 0000111 1
Q ss_pred C--CceeEEeeceecCeEEEEeCCCCC---ccc---cccccCCCCchhhHH---HHHHHHHHHHHhcC------CCceEE
Q 046057 773 G--GTEIKVWFGKVEGLSVYFLEPQNG---FFS---KGCVYGCNNDKERFA---FFCHAALEFLLQGG------FHPDII 835 (1198)
Q Consensus 773 g--~~~i~V~~~~~~Gv~v~~l~~~~~---~f~---rg~iYg~~dd~~Rf~---~F~~aale~L~~~~------~~PDVI 835 (1198)
+ ...+++|.....-++++++....+ ... ..-+|+......|+. ||+.+.++.|.+.+ .++-+.
T Consensus 189 ~~~~~~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds~elRl~Qeyfl~~agvq~I~~~~~~~~~~~~~~~~ 268 (750)
T COG0058 189 DNRVVTLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDSKELRLKQEYFLGSAGVQDILARGHLEHHDLDVLAD 268 (750)
T ss_pred cCcEEEEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCcHHHHHhhhheeeeHHHHHHHHHhhhccccccchhh
Confidence 1 123456666555567777765332 111 122455433455653 67777777777654 566678
Q ss_pred EECCCChhHHHHHHHHhhhh-cCC--------CCCeEEEEecCCchh------hhHHHH---------------------
Q 046057 836 HCHDWSSAPVAWLFKDHYVH-YGL--------SKARIVFTIHNLEFG------THHIGK--------------------- 879 (1198)
Q Consensus 836 H~Hdw~ta~va~llk~~y~~-~gl--------~~ipvV~tIHn~~~~------~~li~~--------------------- 879 (1198)
|.+|-+++++.+-+-..+.. .++ ...-++||.|++... ..+++.
T Consensus 269 ~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in~~~l~~~~ 348 (750)
T COG0058 269 HLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEINARFLPEVR 348 (750)
T ss_pred hhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHHhhhhHHHH
Confidence 89999998877665542211 122 145689999998542 111110
Q ss_pred ----------------------HHhccCEEEEeCHHHHHHHhC---CCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcc
Q 046057 880 ----------------------AMTYADKATTVSHTYSKEVAG---DPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVS 934 (1198)
Q Consensus 880 ----------------------~~~~AD~VitVS~~~a~el~~---~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ 934 (1198)
++..|..+-.||.-+.+.+.. .......+.+|.-|-|||.+..|--...+-|...
T Consensus 349 ~~~~~~~~~~~~~i~~v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~p~~i~nvTNGIt~rrWl~~~n~~L~~~ 428 (750)
T COG0058 349 LLYLGDLIRRGSPIEEVNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLYPEKINNVTNGITPRRWLAPANPGLADL 428 (750)
T ss_pred hhccccccccCCcccceehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccCccccccccCCcCCchhhhhhhHHHHHH
Confidence 112233344455544444432 1222223678999999999999842111111111
Q ss_pred cccc--------------------------hhhhchHHHHHHHH----HHhCCC-CCCCcEEEEEecCCCccCHHHHHHH
Q 046057 935 YTSE--------------------------NLVEGKRAAKEALQ----QKVGLR-KSDLPLVGIITRLTHQKGIHLIKHA 983 (1198)
Q Consensus 935 ys~~--------------------------~~~~gk~~~k~aLr----q~lGL~-~~d~plIg~VGRL~~qKGidlIleA 983 (1198)
++.. .+..-|...|..|. .+.|+. .++...++++-|+...|..++++.=
T Consensus 429 ~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~ 508 (750)
T COG0058 429 LDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHEYKRQLLNLLD 508 (750)
T ss_pred HhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhhhhhhHHhHhh
Confidence 1111 11222333343332 234544 3577899999999999998886654
Q ss_pred HHHhh---c----CCcEEEEEecCCChh------hHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCC
Q 046057 984 IWRTL---D----RGGQVVLLGSAPDPR------IQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSI 1050 (1198)
Q Consensus 984 l~~ll---~----~~~qLVIvGsgpdp~------i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~ 1050 (1198)
+.++. . +.+++++.|.+ .|. +-..+...++..+. -.+|.|+..|+-.+...++.+|||-+..|.
T Consensus 509 i~~ly~~i~~d~~prv~~iFaGKA-hP~y~~aK~iIk~I~~~a~~in~--~lkVvFl~nYdvslA~~iipa~Dvweqis~ 585 (750)
T COG0058 509 IERLYRILKEDWVPRVQIIFAGKA-HPADYAAKEIIKLINDVADVINN--KLKVVFLPNYDVSLAELLIPAADVWEQIPT 585 (750)
T ss_pred HHHHHHHHhcCCCCceEEEEeccC-CCcchHHHHHHHHHHHHHHhhcc--cceEEEeCCCChhHHHhhcccccccccCCC
Confidence 33332 2 34677778875 332 33345555555443 367999999999999999999999999888
Q ss_pred --CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCC
Q 046057 1051 --FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGAD 1106 (1198)
Q Consensus 1051 --~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D 1106 (1198)
.|.+|..-|-||..|.+.|+|--|...|+.... ++.|||+|..+.
T Consensus 586 a~~EASGTsnMK~alNGaltigtlDGanvEi~e~v-----------g~~N~~~fG~~~ 632 (750)
T COG0058 586 AGKEASGTSNMKAALNGALTLGTLDGANVEIYEHV-----------GGENGWIFGETV 632 (750)
T ss_pred CCccccCcCcchHHhcCCceeeccccHHHHHHHhc-----------CCCceEEeCCch
Confidence 699999999999999999999999999999733 238999996644
No 109
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.96 E-value=7.8e-07 Score=103.82 Aligned_cols=349 Identities=13% Similarity=0.076 Sum_probs=187.4
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCe-EEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHN-VDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLS 788 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~-V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~ 788 (1198)
|+|++... .+||--.....|+.+|+++|++ |.++...+.. . ..-....++.
T Consensus 1 ~~ivl~~g------GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~-e---------------------~~l~~~~~~~ 52 (357)
T COG0707 1 KKIVLTAG------GTGGHVFPALALAEELAKRGWEQVIVLGTGDGL-E---------------------AFLVKQYGIE 52 (357)
T ss_pred CeEEEEeC------CCccchhHHHHHHHHHHhhCccEEEEecccccc-e---------------------eeeccccCce
Confidence 45555542 5788888899999999999996 4444322110 0 0011223566
Q ss_pred EEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEec
Q 046057 789 VYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIH 868 (1198)
Q Consensus 789 v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIH 868 (1198)
++.++... +.+...+....+..++......+...++. .+||+|.+-.+..+..+.++.... ++|++++..
T Consensus 53 ~~~I~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~il~~--~kPd~vig~Ggyvs~P~~~Aa~~~------~iPv~ihEq 122 (357)
T COG0707 53 FELIPSGG--LRRKGSLKLLKAPFKLLKGVLQARKILKK--LKPDVVIGTGGYVSGPVGIAAKLL------GIPVIIHEQ 122 (357)
T ss_pred EEEEeccc--ccccCcHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEecCCccccHHHHHHHhC------CCCEEEEec
Confidence 66666431 11111111111223333334455556665 599999996655554444444433 799999888
Q ss_pred CCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCC-CCCCCCCCcccccchhhhchHHH
Q 046057 869 NLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWD-PFNDKFIPVSYTSENLVEGKRAA 947 (1198)
Q Consensus 869 n~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~-P~~D~~Lp~~ys~~~~~~gk~~~ 947 (1198)
|...+.. .+....++++|.+.-+. .. -..+..+++++-|-|..++.. |
T Consensus 123 n~~~G~a-nk~~~~~a~~V~~~f~~----~~----~~~~~~~~~~tG~Pvr~~~~~~~---------------------- 171 (357)
T COG0707 123 NAVPGLA-NKILSKFAKKVASAFPK----LE----AGVKPENVVVTGIPVRPEFEELP---------------------- 171 (357)
T ss_pred CCCcchh-HHHhHHhhceeeecccc----cc----ccCCCCceEEecCcccHHhhccc----------------------
Confidence 8776621 22233457776654333 10 012233566666666655432 1
Q ss_pred HHHHHHHhCCCCCCCcEEEEE-ecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEE
Q 046057 948 KEALQQKVGLRKSDLPLVGII-TRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARL 1026 (1198)
Q Consensus 948 k~aLrq~lGL~~~d~plIg~V-GRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f 1026 (1198)
....+....+ ++++|+++ |....++=-+.+.+++..+.+ +++++...+. +. .+.+.....+++ . +++
T Consensus 172 ~~~~~~~~~~---~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~-~~--~~~~~~~~~~~~----~-~~v 239 (357)
T COG0707 172 AAEVRKDGRL---DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGK-ND--LEELKSAYNELG----V-VRV 239 (357)
T ss_pred hhhhhhhccC---CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCc-ch--HHHHHHHHhhcC----c-EEE
Confidence 1111112111 45555555 555444433333344444433 6777665442 21 233333333322 2 454
Q ss_pred EccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCC
Q 046057 1027 CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGAD 1106 (1198)
Q Consensus 1027 ~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D 1106 (1198)
...+++ +..+|+.||++|.= +-++|+-|++++|+|.|.-..+.-. + ++...-|........|..++..+
T Consensus 240 ~~f~~d--m~~~~~~ADLvIsR----aGa~Ti~E~~a~g~P~IliP~p~~~----~-~~Q~~NA~~l~~~gaa~~i~~~~ 308 (357)
T COG0707 240 LPFIDD--MAALLAAADLVISR----AGALTIAELLALGVPAILVPYPPGA----D-GHQEYNAKFLEKAGAALVIRQSE 308 (357)
T ss_pred eeHHhh--HHHHHHhccEEEeC----CcccHHHHHHHhCCCEEEeCCCCCc----c-chHHHHHHHHHhCCCEEEecccc
Confidence 444343 68999999999954 4579999999999999985443221 1 11111222222235677777666
Q ss_pred --HHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHH
Q 046057 1107 --IAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNR 1184 (1198)
Q Consensus 1107 --~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~ 1184 (1198)
++.|. ..|..+.++++...+|..++ +...-..
T Consensus 309 lt~~~l~--------------------------------------------~~i~~l~~~~~~l~~m~~~a--~~~~~p~ 342 (357)
T COG0707 309 LTPEKLA--------------------------------------------ELILRLLSNPEKLKAMAENA--KKLGKPD 342 (357)
T ss_pred CCHHHHH--------------------------------------------HHHHHHhcCHHHHHHHHHHH--HhcCCCC
Confidence 66776 44445557788888888877 3344455
Q ss_pred HHHHHHHHHHHH
Q 046057 1185 PALDYMELYRAA 1196 (1198)
Q Consensus 1185 ~A~~yielY~~a 1196 (1198)
.+.+..++..+.
T Consensus 343 aa~~i~~~~~~~ 354 (357)
T COG0707 343 AAERIADLLLAL 354 (357)
T ss_pred HHHHHHHHHHHH
Confidence 566666655543
No 110
>PRK14986 glycogen phosphorylase; Provisional
Probab=98.94 E-value=1.4e-07 Score=117.85 Aligned_cols=273 Identities=18% Similarity=0.205 Sum_probs=174.7
Q ss_pred CCCCcEEEEeCCCCCCCCC----CCC----CCCCCc--------------cccc----chhhhchHHHHHHHH----HHh
Q 046057 906 PHLHKFYGILNGIDQDMWD----PFN----DKFIPV--------------SYTS----ENLVEGKRAAKEALQ----QKV 955 (1198)
Q Consensus 906 ~~~~K~~vI~NGID~d~~~----P~~----D~~Lp~--------------~ys~----~~~~~gk~~~k~aLr----q~l 955 (1198)
.-+.|+.-|-|||.+..|- |.- +..|.. ..+. +.+..-|...|..|- ++.
T Consensus 456 l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~ 535 (815)
T PRK14986 456 IFPGRFCNVTNGVTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQL 535 (815)
T ss_pred hCCCcccccCCCCChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456788899999998885 421 111110 0011 224455556666554 355
Q ss_pred CCC-CCCCcEEEEEecCCCccCHHH-HHHHHHHh---hcC------CcEEEEEecC-CChhhHHH----HHHHHHHhCC-
Q 046057 956 GLR-KSDLPLVGIITRLTHQKGIHL-IKHAIWRT---LDR------GGQVVLLGSA-PDPRIQND----FVNLANELHS- 1018 (1198)
Q Consensus 956 GL~-~~d~plIg~VGRL~~qKGidl-IleAl~~l---l~~------~~qLVIvGsg-pdp~i~~~----L~~la~eLgl- 1018 (1198)
|.. +++...++++-|+...|...+ +++.+.++ ++. ..++|+.|.+ |....-.. +..+++-.+.
T Consensus 536 g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 615 (815)
T PRK14986 536 NVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINND 615 (815)
T ss_pred CCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccC
Confidence 765 468889999999999999999 77775554 322 4788989975 22222233 3334431111
Q ss_pred -CCCC--cEEEEccCChHHHHHHHHHccEEEEcCC--CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhcc
Q 046057 1019 -SHAD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQAL 1093 (1198)
Q Consensus 1019 -~~~d--rV~f~g~~d~~~l~~iyA~ADi~LvPS~--~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~ 1093 (1198)
...+ +|.|+..|+-.+...++.+|||.+..|. .|.+|..-|-||..|.+.+++--|...|+....
T Consensus 616 p~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~v---------- 685 (815)
T PRK14986 616 PQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHV---------- 685 (815)
T ss_pred hhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhc----------
Confidence 1123 7999999999999999999999999988 699999999999999999999999999998763
Q ss_pred CCCCcEEEEcCCCHH--------------------HHHHHHhhccccccccccc---ccccccccCCCCccccccccccc
Q 046057 1094 DLEPNGFSFDGADIA--------------------GVDYALNSIHVSSFHTTSR---LYIYEDLEGQPLMIPFKQKQSSM 1150 (1198)
Q Consensus 1094 ~~~~nG~lf~~~D~~--------------------~La~AL~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 1150 (1198)
+++|||.|.. +.+ .|..+|++|.+-.|..+.. -.+|..+ +..-+.=-++.
T Consensus 686 -G~eN~~~fG~-~~~ev~~~~~~~Y~~~~~y~~~~~l~~~~d~i~~g~f~~~~~~~f~~i~~~l-----~~~~D~y~vl~ 758 (815)
T PRK14986 686 -GEENIFIFGN-TAEEVEALRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEEPGRYRDLVDSL-----INFGDHYQVLA 758 (815)
T ss_pred -CCCcEEEeCC-CHHHHHHHHHcCCChhhhccCCHHHHHHHHHHhcCCCCCCCchhHHHHHHHh-----ccCCCeeEeec
Confidence 2278999843 333 3444444444444432210 0111111 00012223444
Q ss_pred chhHHHH----HHHHhcCHHHHHHHHHHHHH--hcCChHHHHHHHHHHHHH
Q 046057 1151 TYDSFRA----ISAYYDGREWLNSLCKTVME--QDWSWNRPALDYMELYRA 1195 (1198)
Q Consensus 1151 ~~~~~rA----I~~l~~~~e~~~~L~~~am~--qdfSW~~~A~~yielY~~ 1195 (1198)
-|+||.. +...|.|+..|.+++-..+. -.||-|+.+.+|.+-...
T Consensus 759 Df~sY~~aq~~v~~~y~d~~~W~~~~i~Nia~~G~FSsDRtI~~Ya~~IW~ 809 (815)
T PRK14986 759 DYRSYVDCQDKVDELYRNQEEWTRKAMLNIANMGYFSSDRTIKEYADEIWH 809 (815)
T ss_pred cHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCCCCcCCchhHHHHHHHhhC
Confidence 5555533 45556788888777655533 479999999999875543
No 111
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=1.1e-06 Score=99.51 Aligned_cols=282 Identities=16% Similarity=0.162 Sum_probs=183.4
Q ss_pred CCceEEEECCCCh---hHHHHHHHHhhhhcCCCCCeEEEEecCCchh-hh---------------H-HHHHHhccCEEEE
Q 046057 830 FHPDIIHCHDWSS---APVAWLFKDHYVHYGLSKARIVFTIHNLEFG-TH---------------H-IGKAMTYADKATT 889 (1198)
Q Consensus 830 ~~PDVIH~Hdw~t---a~va~llk~~y~~~gl~~ipvV~tIHn~~~~-~~---------------l-i~~~~~~AD~Vit 889 (1198)
..||+|...+..+ -++.+++... .++++|+..||..|. .. + .+..-+.||.-.|
T Consensus 102 ~~~~~ilvQNPP~iPtliv~~~~~~l------~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~E~~fgk~a~~nLc 175 (444)
T KOG2941|consen 102 RPPDIILVQNPPSIPTLIVCVLYSIL------TGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWLEKYFGKLADYNLC 175 (444)
T ss_pred cCCcEEEEeCCCCCchHHHHHHHHHH------hcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHHHHHhhcccccchh
Confidence 5799999988654 3333333222 388999999999884 11 1 1112266899999
Q ss_pred eCHHHHHHHhCCCCCCCCCCcEEEEeC-----CCCCCC----CCCCCCCCCCcccccchhhhchHHHHHHHHHHhC--CC
Q 046057 890 VSHTYSKEVAGDPAIAPHLHKFYGILN-----GIDQDM----WDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVG--LR 958 (1198)
Q Consensus 890 VS~~~a~el~~~~~l~~~~~K~~vI~N-----GID~d~----~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lG--L~ 958 (1198)
|+..+++++..+.-+. +..+++. +++.+. |-+....+- .|.+. ..+++...+.++-+++. +-
T Consensus 176 VT~AMr~dL~qnWgi~----ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~--~f~ar-~~q~~~~~~taf~~k~~s~~v 248 (444)
T KOG2941|consen 176 VTKAMREDLIQNWGIN----RAKVLYDRPPSKPTPLDEQHELFMKLAGDHS--PFRAR-EPQDKALERTAFTKKDASGDV 248 (444)
T ss_pred hHHHHHHHHHHhcCCc----eeEEEecCCCCCCCchhHHHHHHhhhccccc--hhhhc-ccccchhhhhhHhhhcccchh
Confidence 9999998887543211 2233321 111111 111110000 01111 12344445555555543 11
Q ss_pred ---CCCCcEEEEEecCCCccCHHHHHHHHHHh-----hc----CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEE
Q 046057 959 ---KSDLPLVGIITRLTHQKGIHLIKHAIWRT-----LD----RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARL 1026 (1198)
Q Consensus 959 ---~~d~plIg~VGRL~~qKGidlIleAl~~l-----l~----~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f 1026 (1198)
.....+++..+..++..++.++++|+..- .+ +.+-.+|-|.|| ..+.+.+.+++++++ +|.+
T Consensus 249 ~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP---lkE~Y~~~I~~~~~~---~v~~ 322 (444)
T KOG2941|consen 249 QLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP---LKEKYSQEIHEKNLQ---HVQV 322 (444)
T ss_pred hhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc---hhHHHHHHHHHhccc---ceee
Confidence 12334777788899999999999999733 22 235567778887 578888899998885 4555
Q ss_pred Ec-cCChHHHHHHHHHccEEEE--cCCC-CCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEE
Q 046057 1027 CL-TYDEPLSHLIYAGADFILV--PSIF-EPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSF 1102 (1198)
Q Consensus 1027 ~g-~~d~~~l~~iyA~ADi~Lv--PS~~-EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf 1102 (1198)
+- +..-+....+++.||+.|+ +|.. =-.++-+..-.-||+|+++-+..-+-|+|.++ +||++|
T Consensus 323 ~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~-------------eNGlvF 389 (444)
T KOG2941|consen 323 CTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHG-------------ENGLVF 389 (444)
T ss_pred eecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcC-------------CCceEe
Confidence 44 4566667899999998765 4432 24678888999999999999999999999998 999999
Q ss_pred cCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHH-hcCC
Q 046057 1103 DGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVME-QDWS 1181 (1198)
Q Consensus 1103 ~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~-qdfS 1181 (1198)
+ |.++|++.|. -+...+-++....+++.+++++ +...
T Consensus 390 ~--Ds~eLa~ql~----------------------------------------~lf~~fp~~a~~l~~lkkn~~e~~e~R 427 (444)
T KOG2941|consen 390 E--DSEELAEQLQ----------------------------------------MLFKNFPDNADELNQLKKNLREEQELR 427 (444)
T ss_pred c--cHHHHHHHHH----------------------------------------HHHhcCCCCHHHHHHHHHhhHHHHhhh
Confidence 7 6889997777 5555566788888888888865 3455
Q ss_pred hHHH
Q 046057 1182 WNRP 1185 (1198)
Q Consensus 1182 W~~~ 1185 (1198)
|+..
T Consensus 428 W~~~ 431 (444)
T KOG2941|consen 428 WDES 431 (444)
T ss_pred HHHH
Confidence 5443
No 112
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=98.87 E-value=1.4e-07 Score=117.46 Aligned_cols=271 Identities=20% Similarity=0.209 Sum_probs=172.8
Q ss_pred CCcEEEEeCCCCCCCC----CCCC----CCCCC-------------ccccc-ch----hhhchHHHHHHHH----HHhCC
Q 046057 908 LHKFYGILNGIDQDMW----DPFN----DKFIP-------------VSYTS-EN----LVEGKRAAKEALQ----QKVGL 957 (1198)
Q Consensus 908 ~~K~~vI~NGID~d~~----~P~~----D~~Lp-------------~~ys~-~~----~~~gk~~~k~aLr----q~lGL 957 (1198)
+.++.-|-|||.+..| +|.- +..|. ..+.. +. +..-|...|..|. ++.|.
T Consensus 444 p~kf~nvTNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~ 523 (798)
T PRK14985 444 PNKFHNVTNGITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGI 523 (798)
T ss_pred CCccCCcCCCcCcchhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5678889999999999 4421 11111 11211 22 2445555555553 55676
Q ss_pred C-CCCCcEEEEEecCCCccCHHH-HHHHHHHhh---c------CCcEEEEEecC-CChhhHHHH----HHHHHHhCCC--
Q 046057 958 R-KSDLPLVGIITRLTHQKGIHL-IKHAIWRTL---D------RGGQVVLLGSA-PDPRIQNDF----VNLANELHSS-- 1019 (1198)
Q Consensus 958 ~-~~d~plIg~VGRL~~qKGidl-IleAl~~ll---~------~~~qLVIvGsg-pdp~i~~~L----~~la~eLgl~-- 1019 (1198)
. +++...++++-|+...|...+ +++.+.++. + ...++|+.|.+ |....-..+ ..+++..+.+
T Consensus 524 ~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~ 603 (798)
T PRK14985 524 EINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPL 603 (798)
T ss_pred ccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChh
Confidence 5 467888999999999999999 887765553 2 14788888975 222223333 3344333221
Q ss_pred CCC--cEEEEccCChHHHHHHHHHccEEEEcCC--CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCC
Q 046057 1020 HAD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDL 1095 (1198)
Q Consensus 1020 ~~d--rV~f~g~~d~~~l~~iyA~ADi~LvPS~--~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~ 1095 (1198)
..+ +|.|+..|+-.+...++.+|||.+..|. .|.+|..-|-+|..|.+.|++--|...|+.... +
T Consensus 604 v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~v-----------G 672 (798)
T PRK14985 604 VGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQV-----------G 672 (798)
T ss_pred hCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHh-----------C
Confidence 012 7999999999999999999999999888 699999999999999999999999999988753 2
Q ss_pred CCcEEEEcCCCHH--------------------HHHHHHhhcccccccccc-c--ccccccccCCCCcccccccccccch
Q 046057 1096 EPNGFSFDGADIA--------------------GVDYALNSIHVSSFHTTS-R--LYIYEDLEGQPLMIPFKQKQSSMTY 1152 (1198)
Q Consensus 1096 ~~nG~lf~~~D~~--------------------~La~AL~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~ 1152 (1198)
.+|||.|.. +.+ .|..+|++|.+-.|..+. - -.+|..+ +..-+.=-++.-|
T Consensus 673 ~eN~f~fG~-~~~ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~i~~~l-----~~~~D~y~vl~Df 746 (798)
T PRK14985 673 EENIFIFGH-TVEQVKALLAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSL-----KQGGDPYLVLADF 746 (798)
T ss_pred cCcEEEeCC-CHHHHHHHHHcCCChhhhccCCHHHHHHHHHHhcCCCCCCCchhHHHHHHHH-----hhCCCeeEeeccH
Confidence 278998843 333 333444444433333221 0 0111111 0001222344445
Q ss_pred hHHHH----HHHHhcCHHHHHHHHHHHH--HhcCChHHHHHHHHHHHHH
Q 046057 1153 DSFRA----ISAYYDGREWLNSLCKTVM--EQDWSWNRPALDYMELYRA 1195 (1198)
Q Consensus 1153 ~~~rA----I~~l~~~~e~~~~L~~~am--~qdfSW~~~A~~yielY~~ 1195 (1198)
+||.. +...|.|+..|.+++-..+ .-.||-|+.+.+|.+-...
T Consensus 747 ~sY~~~q~~v~~~y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~ 795 (798)
T PRK14985 747 AAYVEAQKQVDALYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQ 795 (798)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHccCCcCcHHHHHHHHHHhhC
Confidence 55533 4556778888877654443 3579999999999876544
No 113
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=98.85 E-value=1.4e-07 Score=117.60 Aligned_cols=269 Identities=20% Similarity=0.220 Sum_probs=176.3
Q ss_pred CceEEEECCCChhHHHHHHHHhhhhc-CC--------CCCeEEEEecCCchhh----------h---------------H
Q 046057 831 HPDIIHCHDWSSAPVAWLFKDHYVHY-GL--------SKARIVFTIHNLEFGT----------H---------------H 876 (1198)
Q Consensus 831 ~PDVIH~Hdw~ta~va~llk~~y~~~-gl--------~~ipvV~tIHn~~~~~----------~---------------l 876 (1198)
++.+||.+|-+++++...+-..+... ++ .+.-+++|.|++.... + +
T Consensus 297 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~f 376 (794)
T TIGR02093 297 KKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRF 376 (794)
T ss_pred cceEEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHHH
Confidence 78899999999988766555433221 22 1456899999985420 0 1
Q ss_pred HH-------------------------------HHHhccCEEEEeCHHHHHHHhC---CCCCCCCCCcEEEEeCCCCCCC
Q 046057 877 IG-------------------------------KAMTYADKATTVSHTYSKEVAG---DPAIAPHLHKFYGILNGIDQDM 922 (1198)
Q Consensus 877 i~-------------------------------~~~~~AD~VitVS~~~a~el~~---~~~l~~~~~K~~vI~NGID~d~ 922 (1198)
+. .++..|..|-.||.-..+-+.. ...+..-+.++.-|-|||.+..
T Consensus 377 l~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~P~kf~n~TNGVt~rr 456 (794)
T TIGR02093 377 LAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRR 456 (794)
T ss_pred HHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccCCcCCCCCccc
Confidence 10 0112233344455555444432 0222233568888999999988
Q ss_pred CC----CCC----CCCCC-------------ccc-cc----chhhhchHHHHHHHH----HHhCCC-CCCCcEEEEEecC
Q 046057 923 WD----PFN----DKFIP-------------VSY-TS----ENLVEGKRAAKEALQ----QKVGLR-KSDLPLVGIITRL 971 (1198)
Q Consensus 923 ~~----P~~----D~~Lp-------------~~y-s~----~~~~~gk~~~k~aLr----q~lGL~-~~d~plIg~VGRL 971 (1198)
|- |.- +..|. ..+ +- +.+..-|...|..|- ++.|.. +++....+++-|+
T Consensus 457 Wl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~ 536 (794)
T TIGR02093 457 WLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRL 536 (794)
T ss_pred hhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchhhheec
Confidence 84 311 11111 011 11 344455556666554 456765 4678889999999
Q ss_pred CCccCHHH-HHHHHHHh---hcC------CcEEEEEecC-CChhhHHHHHHHHHHhC----CC--CCC--cEEEEccCCh
Q 046057 972 THQKGIHL-IKHAIWRT---LDR------GGQVVLLGSA-PDPRIQNDFVNLANELH----SS--HAD--RARLCLTYDE 1032 (1198)
Q Consensus 972 ~~qKGidl-IleAl~~l---l~~------~~qLVIvGsg-pdp~i~~~L~~la~eLg----l~--~~d--rV~f~g~~d~ 1032 (1198)
...|.+.+ +++.+.+. ++. ..+||+.|.+ |.......+.+++..+. .+ ..+ +|.|+..|+-
T Consensus 537 heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFlenY~V 616 (794)
T TIGR02093 537 HEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNV 616 (794)
T ss_pred hhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeCCCCh
Confidence 99999999 77766554 322 4588888875 32223334444444333 11 123 7999999999
Q ss_pred HHHHHHHHHccEEEEcCC--CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHH
Q 046057 1033 PLSHLIYAGADFILVPSI--FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGV 1110 (1198)
Q Consensus 1033 ~~l~~iyA~ADi~LvPS~--~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~L 1110 (1198)
.+...++.+||+....|. .|.+|..-|-+|..|.+.|+|--|...|+.... +.+|+|+|.. +.+++
T Consensus 617 slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~v-----------G~eN~fiFG~-~~~ev 684 (794)
T TIGR02093 617 SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEV-----------GAENIFIFGL-TVEEV 684 (794)
T ss_pred HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHh-----------CcccEEEcCC-CHHHH
Confidence 999999999999999888 699999999999999999999999999998764 2379999954 66666
Q ss_pred H
Q 046057 1111 D 1111 (1198)
Q Consensus 1111 a 1111 (1198)
.
T Consensus 685 ~ 685 (794)
T TIGR02093 685 E 685 (794)
T ss_pred H
Confidence 5
No 114
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.74 E-value=3.5e-07 Score=114.63 Aligned_cols=347 Identities=19% Similarity=0.176 Sum_probs=213.7
Q ss_pred CceEEEECCCChhHHHHHHHHhhhh-cCC--------CCCeEEEEecCCchhh------hHH------------------
Q 046057 831 HPDIIHCHDWSSAPVAWLFKDHYVH-YGL--------SKARIVFTIHNLEFGT------HHI------------------ 877 (1198)
Q Consensus 831 ~PDVIH~Hdw~ta~va~llk~~y~~-~gl--------~~ipvV~tIHn~~~~~------~li------------------ 877 (1198)
++.+||.+|-+++++...+-..+.. .++ ....+++|.|++.... .++
T Consensus 300 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~lpr~~~II~~In~~~ 379 (797)
T cd04300 300 DKVAIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRF 379 (797)
T ss_pred CceEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHChHHHHHHHHHHHHH
Confidence 7889999999998876555544332 232 2456899999985320 000
Q ss_pred --------------------------------HHHHhccCEEEEeCHHHHHHHhCC---CCCCCCCCcEEEEeCCCCCCC
Q 046057 878 --------------------------------GKAMTYADKATTVSHTYSKEVAGD---PAIAPHLHKFYGILNGIDQDM 922 (1198)
Q Consensus 878 --------------------------------~~~~~~AD~VitVS~~~a~el~~~---~~l~~~~~K~~vI~NGID~d~ 922 (1198)
..++..|..|-.||.-+.+-+... .....-+.|+.-|-|||.+..
T Consensus 380 ~~~~~~~~~~~~~~~~~l~ii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~P~kf~n~TNGVt~rr 459 (797)
T cd04300 380 LEEVRAKYPGDEDRIRRMSIIEEGGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRR 459 (797)
T ss_pred HHHHHHhcCCCHHHHHhhcccccCCCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHHhhCCCccCCcCCCCCcch
Confidence 012233445555666555544431 122333568889999999988
Q ss_pred CC----CCC----CCCCC-------------ccc-cc----chhhhchHHHHHHHH----HHhCCC-CCCCcEEEEEecC
Q 046057 923 WD----PFN----DKFIP-------------VSY-TS----ENLVEGKRAAKEALQ----QKVGLR-KSDLPLVGIITRL 971 (1198)
Q Consensus 923 ~~----P~~----D~~Lp-------------~~y-s~----~~~~~gk~~~k~aLr----q~lGL~-~~d~plIg~VGRL 971 (1198)
|- |.- +..|. ..+ +- +.+..-|...|..|- ++.|+. .++...++++-|+
T Consensus 460 Wl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~ 539 (797)
T cd04300 460 WLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRI 539 (797)
T ss_pred hhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeec
Confidence 84 321 11111 011 11 334556666666654 466765 4688899999999
Q ss_pred CCccCHHH-HHHHHHHh---hcC------CcEEEEEecC-CChhhHHHHHHHHHHhC----CC--CCC--cEEEEccCCh
Q 046057 972 THQKGIHL-IKHAIWRT---LDR------GGQVVLLGSA-PDPRIQNDFVNLANELH----SS--HAD--RARLCLTYDE 1032 (1198)
Q Consensus 972 ~~qKGidl-IleAl~~l---l~~------~~qLVIvGsg-pdp~i~~~L~~la~eLg----l~--~~d--rV~f~g~~d~ 1032 (1198)
...|.+.+ +++.+.+. ++. ..+||+.|.+ |.......+.+++..+. .+ ..+ +|.|+..|+-
T Consensus 540 heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~V 619 (797)
T cd04300 540 HEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNV 619 (797)
T ss_pred hhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCCh
Confidence 99999999 77765544 322 3778888875 22222333333333322 11 123 7999999999
Q ss_pred HHHHHHHHHccEEEEcCC--CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHH
Q 046057 1033 PLSHLIYAGADFILVPSI--FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGV 1110 (1198)
Q Consensus 1033 ~~l~~iyA~ADi~LvPS~--~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~L 1110 (1198)
.+...++.+|||....|. .|.+|..-|-+|..|.+.|+|--|...|+.... +.+|+|+|.. +.+++
T Consensus 620 slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~v-----------G~eN~fiFG~-~~~ev 687 (797)
T cd04300 620 SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEV-----------GEENIFIFGL-TAEEV 687 (797)
T ss_pred HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHh-----------CcCcEEEeCC-CHHHH
Confidence 999999999999999888 699999999999999999999999999998764 2378999943 33333
Q ss_pred H--------------------HHHhhcccccccccc---cccccccccCCCCcccccccccccchhHHHH----HHHHhc
Q 046057 1111 D--------------------YALNSIHVSSFHTTS---RLYIYEDLEGQPLMIPFKQKQSSMTYDSFRA----ISAYYD 1163 (1198)
Q Consensus 1111 a--------------------~AL~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA----I~~l~~ 1163 (1198)
. .+|++|.+..|..+. --.+|..+ +..=+.=-++.-++||.. +...|.
T Consensus 688 ~~~~~~~y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~i~~~l-----~~~~D~y~vl~Df~~Y~~~q~~v~~~Y~ 762 (797)
T cd04300 688 EALRANGYYPADYYEADPELRRVLDQIASGFFSPGDPGEFRPLVDSL-----LNGNDEYLVLADFESYVDAQEKVDALYR 762 (797)
T ss_pred HHHHHcCCChHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH-----ccCCCeeEeeccHHHHHHHHHHHHHHcc
Confidence 3 334433333332111 00011111 000012234444555533 445567
Q ss_pred CHHHHHHHHHHH--HHhcCChHHHHHHHHHHHH
Q 046057 1164 GREWLNSLCKTV--MEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1164 ~~e~~~~L~~~a--m~qdfSW~~~A~~yielY~ 1194 (1198)
|+..|.+++-.. ..-.||-|+.+.+|.+-+.
T Consensus 763 d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW 795 (797)
T cd04300 763 DQEEWARKSILNIARSGKFSSDRTIREYAEDIW 795 (797)
T ss_pred CHHHHHHHHHHHHHccCCcCCcccHHHHHHHhh
Confidence 777777665443 3357999999999987543
No 115
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.64 E-value=1.4e-07 Score=88.21 Aligned_cols=89 Identities=18% Similarity=0.225 Sum_probs=77.3
Q ss_pred EEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhccccccc
Q 046057 1044 FILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFH 1123 (1198)
Q Consensus 1044 i~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~ 1123 (1198)
|+|.|+..+++++..+|+|+||+|+|+...+++.+++.++ .+++.++ |++++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~-------------~~~~~~~--~~~el~~----------- 54 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDG-------------EHIITYN--DPEELAE----------- 54 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCC-------------CeEEEEC--CHHHHHH-----------
Confidence 4678999999999999999999999999999999998776 6788887 8999984
Q ss_pred ccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHHHH
Q 046057 1124 TTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV---MEQDWSWNRPALDYME 1191 (1198)
Q Consensus 1124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~yie 1191 (1198)
++..+.++++.++++++++ +...|+|+..++++++
T Consensus 55 ---------------------------------~i~~ll~~~~~~~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 55 ---------------------------------KIEYLLENPEERRRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred ---------------------------------HHHHHHCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 4446668999999998888 5678999999998874
No 116
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=98.53 E-value=6.8e-06 Score=102.01 Aligned_cols=345 Identities=21% Similarity=0.247 Sum_probs=190.7
Q ss_pred ceEEEECCCChhHHHHHHHHhhhh-cCCC--------CCeEEEEecCCchhh-------------------------h--
Q 046057 832 PDIIHCHDWSSAPVAWLFKDHYVH-YGLS--------KARIVFTIHNLEFGT-------------------------H-- 875 (1198)
Q Consensus 832 PDVIH~Hdw~ta~va~llk~~y~~-~gl~--------~ipvV~tIHn~~~~~-------------------------~-- 875 (1198)
+-+||++|.+++++...+-..+.. .++. ..-++||.|++-... +
T Consensus 215 ~~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~ 294 (713)
T PF00343_consen 215 KVVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFL 294 (713)
T ss_dssp HEEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred ceEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHHChHHHHHHHHHhHHHH
Confidence 458999999998876665555433 3442 345899999985320 0
Q ss_pred -----------------------------HHHHHHhccCEEEEeCHHHHHHHhCC---CCCCCCCCcEEEEeCCCCCCCC
Q 046057 876 -----------------------------HIGKAMTYADKATTVSHTYSKEVAGD---PAIAPHLHKFYGILNGIDQDMW 923 (1198)
Q Consensus 876 -----------------------------li~~~~~~AD~VitVS~~~a~el~~~---~~l~~~~~K~~vI~NGID~d~~ 923 (1198)
+-..++..|..+-.||.-..+-+... ..+..-+.+|.-|-|||.+..|
T Consensus 295 ~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrW 374 (713)
T PF00343_consen 295 DELRRKYPGDEDQIRRLSIIEEGNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRW 374 (713)
T ss_dssp HHHHHHSTT-HHHHHHHSSEETSSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCC
T ss_pred HHHHHHhcCcchhhhhcccccccchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCccc
Confidence 11124566788999999887766432 1112234689999999999999
Q ss_pred C----CC---------CCCCC--C------cccccc-----hhhhchHHHHHH----HHHHhCCC-CCCCcEEEEEecCC
Q 046057 924 D----PF---------NDKFI--P------VSYTSE-----NLVEGKRAAKEA----LQQKVGLR-KSDLPLVGIITRLT 972 (1198)
Q Consensus 924 ~----P~---------~D~~L--p------~~ys~~-----~~~~gk~~~k~a----Lrq~lGL~-~~d~plIg~VGRL~ 972 (1198)
- |. .+.++ + ..+..+ .+..-|...|.. ++++.|+. .++...++++-|+.
T Consensus 375 l~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~h 454 (713)
T PF00343_consen 375 LSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFH 454 (713)
T ss_dssp CCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SC
T ss_pred ccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcc
Confidence 4 31 00111 0 011100 111222333333 33456654 46778899999999
Q ss_pred CccCHHH-HHHHH---HHhhc------CCcEEEEEecC-CChhhHHHHHHHHHHh----CCC--CCC--cEEEEccCChH
Q 046057 973 HQKGIHL-IKHAI---WRTLD------RGGQVVLLGSA-PDPRIQNDFVNLANEL----HSS--HAD--RARLCLTYDEP 1033 (1198)
Q Consensus 973 ~qKGidl-IleAl---~~ll~------~~~qLVIvGsg-pdp~i~~~L~~la~eL----gl~--~~d--rV~f~g~~d~~ 1033 (1198)
..|...+ +++.+ .+++. ..+++|+.|.+ |....-..+.+++.++ +.+ ..+ +|.|+..|+-.
T Consensus 455 eYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvs 534 (713)
T PF00343_consen 455 EYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVS 534 (713)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHH
T ss_pred cccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHH
Confidence 9999988 45443 44442 25789999976 2222223333333332 111 113 79999999999
Q ss_pred HHHHHHHHccEEEEcCC--CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHH-
Q 046057 1034 LSHLIYAGADFILVPSI--FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGV- 1110 (1198)
Q Consensus 1034 ~l~~iyA~ADi~LvPS~--~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~L- 1110 (1198)
+...++.+|||.+..|+ .|.+|..-|-||..|.+.+++--|...|+.... +++|.|+|.. +.+++
T Consensus 535 lA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~v-----------G~eN~fiFG~-~~~ev~ 602 (713)
T PF00343_consen 535 LAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAV-----------GEENIFIFGL-TAEEVE 602 (713)
T ss_dssp HHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH------------GGGSEEES--BHHHHH
T ss_pred HHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhc-----------CCCcEEEcCC-CHHHHH
Confidence 99999999999999988 699999999999999999999999999998653 2268899843 44443
Q ss_pred -------------------HHHHhhcccccccc-ccccc--ccccccCCCCcccccccccccchhHHHH----HHHHhcC
Q 046057 1111 -------------------DYALNSIHVSSFHT-TSRLY--IYEDLEGQPLMIPFKQKQSSMTYDSFRA----ISAYYDG 1164 (1198)
Q Consensus 1111 -------------------a~AL~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~rA----I~~l~~~ 1164 (1198)
..++++|.+..|.. .+..+ +|.. ++..-+.--++.-+.||.. +...|.|
T Consensus 603 ~~~~~gY~~~~~y~~~~~l~~vld~i~~g~f~~~~~~~f~~i~~~-----~~~~~D~y~vl~Df~~Y~~~q~~v~~~Y~d 677 (713)
T PF00343_consen 603 ELRKNGYNPREYYENDPELKRVLDQIISGFFSPGDPDEFKPIYDS-----LLMYNDEYLVLADFESYVEAQEKVDKAYRD 677 (713)
T ss_dssp HHHHHT-HHHHHHHHSHHHHHHHHHHHHTTTTTTSTTTTHHHHHH-----CHHHTTTT-HHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHhcCCCcccccccCHHHHHHHHHHhcCCCCCCCchhHHHHHhC-----cCCCCCcchhhhhHHHHHHHHHHHHHHhcC
Confidence 34444444443332 11111 1111 0000111122233333322 3445678
Q ss_pred HHHHHHHHHHHH--HhcCChHHHHHHHHHHH
Q 046057 1165 REWLNSLCKTVM--EQDWSWNRPALDYMELY 1193 (1198)
Q Consensus 1165 ~e~~~~L~~~am--~qdfSW~~~A~~yielY 1193 (1198)
++.|.+++-..+ .-.||-|+.+++|.+-+
T Consensus 678 ~~~W~~~~i~Nia~~g~FssDrtI~~Ya~~I 708 (713)
T PF00343_consen 678 PKKWNKMSILNIARSGKFSSDRTIREYAEDI 708 (713)
T ss_dssp HHHHHHHHHHHHHCGGGGBHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCCchHHHHHHHHHh
Confidence 888877755543 34799999999998744
No 117
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.52 E-value=5.7e-06 Score=88.31 Aligned_cols=169 Identities=18% Similarity=0.228 Sum_probs=110.6
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||++|...-.| +.-||-|+++..|+..|+++||+|+|.|.....-. . .....|+++.
T Consensus 3 kIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~-~---------------------~~~y~gv~l~ 59 (185)
T PF09314_consen 3 KIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPY-K---------------------EFEYNGVRLV 59 (185)
T ss_pred eEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCC-C---------------------CcccCCeEEE
Confidence 79999999888 47999999999999999999999999996522100 0 1123566666
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHH-HHHHHHHHhcCCCceEEEECCCC-hhHHHHHHHHhhhhcCCCCCeEEEEec
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFC-HAALEFLLQGGFHPDIIHCHDWS-SAPVAWLFKDHYVHYGLSKARIVFTIH 868 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~-~aale~L~~~~~~PDVIH~Hdw~-ta~va~llk~~y~~~gl~~ipvV~tIH 868 (1198)
.++.+.. + .-...-|.++| ..++.+++....+.||||++... .+++..+++... ..+.|+++++|
T Consensus 60 ~i~~~~~----g-----~~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~----~~g~~v~vN~D 126 (185)
T PF09314_consen 60 YIPAPKN----G-----SAESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLR----KKGGKVVVNMD 126 (185)
T ss_pred EeCCCCC----C-----chHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhh----hcCCcEEECCC
Confidence 6654310 0 01112222332 22233333333468899999876 344444443321 12679999999
Q ss_pred CCchhhh--------HH----HHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCC
Q 046057 869 NLEFGTH--------HI----GKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGID 919 (1198)
Q Consensus 869 n~~~~~~--------li----~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID 919 (1198)
++++.+. ++ +.+.++||.+|+-|+...+.+... ++ ..+...|++|.|
T Consensus 127 GlEWkR~KW~~~~k~~lk~~E~~avk~ad~lIaDs~~I~~y~~~~--y~--~~~s~~IaYGad 185 (185)
T PF09314_consen 127 GLEWKRAKWGRPAKKYLKFSEKLAVKYADRLIADSKGIQDYIKER--YG--RKKSTFIAYGAD 185 (185)
T ss_pred cchhhhhhcCHHHHHHHHHHHHHHHHhCCEEEEcCHHHHHHHHHH--cC--CCCcEEecCCCC
Confidence 9998643 11 235589999999999999999742 22 357889999976
No 118
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.48 E-value=2.3e-06 Score=85.02 Aligned_cols=128 Identities=25% Similarity=0.379 Sum_probs=81.5
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
|||+|+..+ +.++..++++|+++||+|.++++..+... ....+|+.++
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~~~-----------------------~~~~~~i~~~ 48 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDYEK-----------------------YEIIEGIKVI 48 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCchh-----------------------hhHhCCeEEE
Confidence 688887644 34789999999999999999998533200 0113455566
Q ss_pred EeCCCCCccccccccCCCCchhhHHHH-HHHHHHHHHhcCCCceEEEECCCCh-hHHHHHHHHhhhhcCCCCCeEEEEec
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFF-CHAALEFLLQGGFHPDIIHCHDWSS-APVAWLFKDHYVHYGLSKARIVFTIH 868 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F-~~aale~L~~~~~~PDVIH~Hdw~t-a~va~llk~~y~~~gl~~ipvV~tIH 868 (1198)
.++..... .+.++ ...+..++++ .+|||||||...+ ++++.+++... ..+|+|++.|
T Consensus 49 ~~~~~~k~--------------~~~~~~~~~l~k~ik~--~~~DvIh~h~~~~~~~~~~l~~~~~-----~~~~~i~~~h 107 (139)
T PF13477_consen 49 RLPSPRKS--------------PLNYIKYFRLRKIIKK--EKPDVIHCHTPSPYGLFAMLAKKLL-----KNKKVIYTVH 107 (139)
T ss_pred EecCCCCc--------------cHHHHHHHHHHHHhcc--CCCCEEEEecCChHHHHHHHHHHHc-----CCCCEEEEec
Confidence 55421100 11111 1133444444 4799999999776 66676665543 1389999999
Q ss_pred CCchh---------hhHHHHHHhccCEEEEeC
Q 046057 869 NLEFG---------THHIGKAMTYADKATTVS 891 (1198)
Q Consensus 869 n~~~~---------~~li~~~~~~AD~VitVS 891 (1198)
+..+. ..+++..++.+|.+++.|
T Consensus 108 g~~~~~~~~~~~~~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 108 GSDFYNSSKKKKLKKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred CCeeecCCchHHHHHHHHHHHHHhCCEEEEcC
Confidence 76431 234456778899999875
No 119
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.47 E-value=1.3e-05 Score=93.89 Aligned_cols=123 Identities=18% Similarity=0.096 Sum_probs=75.5
Q ss_pred CCcEEEEEecCCC---ccCHHHHHHHHHHhhcCCcEEEE-EecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 961 DLPLVGIITRLTH---QKGIHLIKHAIWRTLDRGGQVVL-LGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 961 d~plIg~VGRL~~---qKGidlIleAl~~ll~~~~qLVI-vGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
+.++++..|.... .+-...+++|+..+ +.++|+ +|..+... . ..+++|.+.+.++. .
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~~-----------~--~~~~~v~~~~~~p~---~ 299 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLGA-----------E--DLPDNVRVVDFVPH---D 299 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCccccc-----------c--CCCCceEEeCCCCH---H
Confidence 4567777788743 34455666666554 566554 55442110 1 22678988887754 4
Q ss_pred HHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCC--CHHHHHHHH
Q 046057 1037 LIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVDYAL 1114 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La~AL 1114 (1198)
.++..||++|. -+-..+++||+++|+|.|+....+ |-.. .++.......|..++.. +++.|.++|
T Consensus 300 ~ll~~~d~~I~----hgG~~t~~eal~~GvP~v~~P~~~--dQ~~-------~a~~~~~~G~g~~l~~~~~~~~~l~~al 366 (401)
T cd03784 300 WLLPRCAAVVH----HGGAGTTAAALRAGVPQLVVPFFG--DQPF-------WAARVAELGAGPALDPRELTAERLAAAL 366 (401)
T ss_pred HHhhhhheeee----cCCchhHHHHHHcCCCEEeeCCCC--CcHH-------HHHHHHHCCCCCCCCcccCCHHHHHHHH
Confidence 67899999993 344589999999999999986653 2111 11111112446666544 677888666
Q ss_pred h
Q 046057 1115 N 1115 (1198)
Q Consensus 1115 ~ 1115 (1198)
.
T Consensus 367 ~ 367 (401)
T cd03784 367 R 367 (401)
T ss_pred H
Confidence 6
No 120
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.46 E-value=1.6e-05 Score=95.26 Aligned_cols=121 Identities=12% Similarity=0.068 Sum_probs=95.9
Q ss_pred cEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH
Q 046057 963 PLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA 1040 (1198)
Q Consensus 963 plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA 1040 (1198)
.-+++++. +..++++..+.+ ++++|-| |.+.+ ....|.++ +++ ++++++.++....+..+|.
T Consensus 283 ~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te--~s~kL~~L-~~y-----~nvvly~~~~~~~l~~ly~ 346 (438)
T TIGR02919 283 KQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE--MSSKLMSL-DKY-----DNVKLYPNITTQKIQELYQ 346 (438)
T ss_pred ccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc--ccHHHHHH-Hhc-----CCcEEECCcChHHHHHHHH
Confidence 34666662 788888888864 6899988 76533 23677777 443 5688888888877899999
Q ss_pred HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeC-CccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1041 GADFILVPSIFEPCGLTQLVAMRYGSIPVVRK-TGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1041 ~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~-tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.||++|..|..|+++++++||+..|+|+|+.+ +-|..+++.+ |.+|+.+++++|+++|.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~----------------g~l~~~~~~~~m~~~i~ 406 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS----------------ENIFEHNEVDQLISKLK 406 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC----------------CceecCCCHHHHHHHHH
Confidence 99999999999999999999999999999944 4455566543 78999999999997666
No 121
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.45 E-value=3.2e-05 Score=87.45 Aligned_cols=267 Identities=14% Similarity=0.062 Sum_probs=145.1
Q ss_pred EEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEE
Q 046057 711 HIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVY 790 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~ 790 (1198)
||+|.+.-..-+ ..|--.-+..||++|+++||+|.+++........ ......|.+++
T Consensus 1 ~i~ir~Da~~~i--G~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~---------------------~~i~~~g~~v~ 57 (279)
T TIGR03590 1 KILFRADASSEI--GLGHVMRCLTLARALHAQGAEVAFACKPLPGDLI---------------------DLLLSAGFPVY 57 (279)
T ss_pred CEEEEecCCccc--cccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHH---------------------HHHHHcCCeEE
Confidence 466666543322 2244455667889999999999999854221000 01123466666
Q ss_pred EeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCC
Q 046057 791 FLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL 870 (1198)
Q Consensus 791 ~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~ 870 (1198)
.++..... ..| ....++++.+ .+||+|.+-.+... ..+.+... ...+.++.|-++
T Consensus 58 ~~~~~~~~---------~~d-------~~~~~~~l~~--~~~d~vV~D~y~~~--~~~~~~~k-----~~~~~l~~iDD~ 112 (279)
T TIGR03590 58 ELPDESSR---------YDD-------ALELINLLEE--EKFDILIVDHYGLD--ADWEKLIK-----EFGRKILVIDDL 112 (279)
T ss_pred EecCCCch---------hhh-------HHHHHHHHHh--cCCCEEEEcCCCCC--HHHHHHHH-----HhCCeEEEEecC
Confidence 66533110 001 1224455554 38999888544221 11111111 134555566665
Q ss_pred chhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHH
Q 046057 871 EFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEA 950 (1198)
Q Consensus 871 ~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~a 950 (1198)
.... ..+|.++-.++. ++.....+... ..+ .+.-|++.-...| .|. ...+..
T Consensus 113 ~~~~-------~~~D~vin~~~~-~~~~~y~~~~~--~~~--~~l~G~~Y~~lr~---eF~-------------~~~~~~ 164 (279)
T TIGR03590 113 ADRP-------HDCDLLLDQNLG-ADASDYQGLVP--ANC--RLLLGPSYALLRE---EFY-------------QLATAN 164 (279)
T ss_pred CCCC-------cCCCEEEeCCCC-cCHhHhcccCc--CCC--eEEecchHHhhhH---HHH-------------HhhHhh
Confidence 4221 168988877664 33332211111 122 2344665322111 110 000000
Q ss_pred HHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEE-EEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEcc
Q 046057 951 LQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQV-VLLGSAPDPRIQNDFVNLANELHSSHADRARLCLT 1029 (1198)
Q Consensus 951 Lrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qL-VIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~ 1029 (1198)
..++ ....+++++|..++.+....+++++..+. .++++ |++|.+ .+ ..+.+++++.. ..++++++.
T Consensus 165 ~~~~-----~~~~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~-~~-~~~~l~~~~~~-----~~~i~~~~~ 231 (279)
T TIGR03590 165 KRRK-----PLRRVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSS-NP-NLDELKKFAKE-----YPNIILFID 231 (279)
T ss_pred hccc-----ccCeEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCC-Cc-CHHHHHHHHHh-----CCCEEEEeC
Confidence 0000 12357888888888776777888887653 44554 467775 22 24567776653 246877655
Q ss_pred CChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC
Q 046057 1030 YDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1030 ~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
.+ .+..+|+.||++|.+ .|.|+.|++++|+|.|+-..
T Consensus 232 ~~--~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 VE--NMAELMNEADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HH--HHHHHHHHCCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 43 478999999999984 68999999999999998544
No 122
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.40 E-value=8.2e-05 Score=87.31 Aligned_cols=245 Identities=13% Similarity=0.105 Sum_probs=144.9
Q ss_pred hhHHHHHHHHHHHHHhcCCCceEEEECC-CChhHHHHHHHHhhhhcCCCCCeEEEEecCCc-hh--hhHHHHHH-hccCE
Q 046057 812 ERFAFFCHAALEFLLQGGFHPDIIHCHD-WSSAPVAWLFKDHYVHYGLSKARIVFTIHNLE-FG--THHIGKAM-TYADK 886 (1198)
Q Consensus 812 ~Rf~~F~~aale~L~~~~~~PDVIH~Hd-w~ta~va~llk~~y~~~gl~~ipvV~tIHn~~-~~--~~li~~~~-~~AD~ 886 (1198)
...+.....+.+++.+ .+||+|.+|. -.+.+.+.+..... ++|++..-=+.. ++ ....+..+ +.|+.
T Consensus 76 ~~~~~~~~~~~~~~~~--~~Pd~vlv~GD~~~~la~alaA~~~------~IPv~HveaG~rs~~~~eE~~r~~i~~la~l 147 (365)
T TIGR03568 76 KSMGLTIIGFSDAFER--LKPDLVVVLGDRFEMLAAAIAAALL------NIPIAHIHGGEVTEGAIDESIRHAITKLSHL 147 (365)
T ss_pred HHHHHHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHh------CCcEEEEECCccCCCCchHHHHHHHHHHHhh
Confidence 3444455566666666 4899988885 55555555555444 889884332221 11 12233332 34677
Q ss_pred EEEeCHHHHHHHhCCCCCCCCCCcEEEEeC-CCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEE
Q 046057 887 ATTVSHTYSKEVAGDPAIAPHLHKFYGILN-GIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLV 965 (1198)
Q Consensus 887 VitVS~~~a~el~~~~~l~~~~~K~~vI~N-GID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plI 965 (1198)
..+..+..++.+...+ ....+++++-| ++|.-.+.. ...+..+.+++|++.....++
T Consensus 148 ~f~~t~~~~~~L~~eg---~~~~~i~~tG~~~iD~l~~~~-------------------~~~~~~~~~~lgl~~~~~~vl 205 (365)
T TIGR03568 148 HFVATEEYRQRVIQMG---EDPDRVFNVGSPGLDNILSLD-------------------LLSKEELEEKLGIDLDKPYAL 205 (365)
T ss_pred ccCCCHHHHHHHHHcC---CCCCcEEEECCcHHHHHHhhh-------------------ccCHHHHHHHhCCCCCCCEEE
Confidence 8888888888886533 33456766644 555322111 012356778888863223434
Q ss_pred EEEecCC-----CccCHHHHHHHHHHhhcCCcEEEEEe--cCC-ChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHH
Q 046057 966 GIITRLT-----HQKGIHLIKHAIWRTLDRGGQVVLLG--SAP-DPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHL 1037 (1198)
Q Consensus 966 g~VGRL~-----~qKGidlIleAl~~ll~~~~qLVIvG--sgp-dp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~ 1037 (1198)
+.+-|-+ ....+..+++++..+ ...+ +++. .+| +..+.+.+.++.. . .+++++++..+...+..
T Consensus 206 vt~Hp~~~~~~~~~~~l~~li~~L~~~-~~~~--~vi~P~~~p~~~~i~~~i~~~~~----~-~~~v~l~~~l~~~~~l~ 277 (365)
T TIGR03568 206 VTFHPVTLEKESAEEQIKELLKALDEL-NKNY--IFTYPNADAGSRIINEAIEEYVN----E-HPNFRLFKSLGQERYLS 277 (365)
T ss_pred EEeCCCcccccCchHHHHHHHHHHHHh-ccCC--EEEEeCCCCCchHHHHHHHHHhc----C-CCCEEEECCCChHHHHH
Confidence 4444432 223455556665444 2233 4442 212 2223444444421 1 25799999999989999
Q ss_pred HHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1038 IYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1038 iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
+++.||++|--|- |.. .||+++|+|+|+ .|.-++.+..+ .|++++ +.|++++.+++.
T Consensus 278 Ll~~a~~vitdSS----ggi-~EA~~lg~Pvv~--l~~R~e~~~~g-------------~nvl~v-g~~~~~I~~a~~ 334 (365)
T TIGR03568 278 LLKNADAVIGNSS----SGI-IEAPSFGVPTIN--IGTRQKGRLRA-------------DSVIDV-DPDKEEIVKAIE 334 (365)
T ss_pred HHHhCCEEEEcCh----hHH-HhhhhcCCCEEe--ecCCchhhhhc-------------CeEEEe-CCCHHHHHHHHH
Confidence 9999999995552 333 899999999995 45567777655 677777 668999987766
No 123
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.39 E-value=1.3e-06 Score=100.83 Aligned_cols=255 Identities=17% Similarity=0.162 Sum_probs=143.4
Q ss_pred CchhhHHHHHHHHHHHHHhc-CCC-ceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhh-----------
Q 046057 809 NDKERFAFFCHAALEFLLQG-GFH-PDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTH----------- 875 (1198)
Q Consensus 809 dd~~Rf~~F~~aale~L~~~-~~~-PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~----------- 875 (1198)
+|+.-+++..-..+.-.... ... .-|.|+|.|+.+..-.+.+... -.+-.|||.|..-.++.
T Consensus 150 NDaiilG~~vawFL~e~~~~~~~~~~vVahFHEW~AGVgL~l~R~rr-----l~iaTifTTHATLLGRyLCA~~~DfYNn 224 (692)
T KOG3742|consen 150 NDAIILGFMVAWFLGEFRELASSYTAVVAHFHEWQAGVGLILCRARR-----LDIATIFTTHATLLGRYLCAGNVDFYNN 224 (692)
T ss_pred cchhhHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccchheehhcc-----cceEEEeehhHHHHHHHHhcccchhhhc
Confidence 56667777665554433332 223 3456899999775433333221 15667999997643310
Q ss_pred --------------------HHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCccc
Q 046057 876 --------------------HIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSY 935 (1198)
Q Consensus 876 --------------------li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~y 935 (1198)
+.+.+...|+.++|||+-.+-+... .+.- ..=.+.|||++...|.-.-
T Consensus 225 Ld~f~vD~EAGkr~IYHrYC~ERaa~h~AhVFTTVSeITa~EAeH--lLkR--KPD~itPNGLNV~KFsA~H-------- 292 (692)
T KOG3742|consen 225 LDSFDVDKEAGKRQIYHRYCLERAAAHTAHVFTTVSEITALEAEH--LLKR--KPDVITPNGLNVKKFSAVH-------- 292 (692)
T ss_pred hhhcccchhhccchhHHHHHHHHHhhhhhhhhhhHHHHHHHHHHH--HHhc--CCCeeCCCCcceeehhHHH--------
Confidence 3345556789999999988766542 1111 1224569999887664210
Q ss_pred ccchhhhchHHHHHHHH----HHh----CCCCCCCcEEEEEecCC-CccCHHHHHHHHHHhhc------CC---cEEEEE
Q 046057 936 TSENLVEGKRAAKEALQ----QKV----GLRKSDLPLVGIITRLT-HQKGIHLIKHAIWRTLD------RG---GQVVLL 997 (1198)
Q Consensus 936 s~~~~~~gk~~~k~aLr----q~l----GL~~~d~plIg~VGRL~-~qKGidlIleAl~~ll~------~~---~qLVIv 997 (1198)
.-.+ -....|+.+. -++ .++-++...+.+.||+. ..||-+.++++++++-- .. +-|+|+
T Consensus 293 EFQN---LHA~~KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlIm 369 (692)
T KOG3742|consen 293 EFQN---LHAQKKEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIM 369 (692)
T ss_pred HHHH---HHHHHHHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEe
Confidence 0001 1122233332 222 12212455677779997 69999999999998841 12 223332
Q ss_pred ecCCC---------hhhHHHHHH---------------------------------------------------------
Q 046057 998 GSAPD---------PRIQNDFVN--------------------------------------------------------- 1011 (1198)
Q Consensus 998 Gsgpd---------p~i~~~L~~--------------------------------------------------------- 1011 (1198)
-.... ..+...|.+
T Consensus 370 PaktN~FnVesLkgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm 449 (692)
T KOG3742|consen 370 PAKTNSFNVESLKGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNM 449 (692)
T ss_pred ecCCCccchhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccc
Confidence 21100 000000000
Q ss_pred ----------HHHHhCC--CCCCcE--EEEccC---ChH----HHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEE
Q 046057 1012 ----------LANELHS--SHADRA--RLCLTY---DEP----LSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVV 1070 (1198)
Q Consensus 1012 ----------la~eLgl--~~~drV--~f~g~~---d~~----~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIv 1070 (1198)
-+.+.++ +-.|+| .|+..| ..| ....+.++|.+.|+||+|||+|.|..|.--+|+|-|+
T Consensus 450 ~dDa~DpiL~~iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvt 529 (692)
T KOG3742|consen 450 IDDANDPILSSIRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVT 529 (692)
T ss_pred cccccchHHHHhHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEecccccc
Confidence 0011111 011233 333322 111 1357889999999999999999999999999999999
Q ss_pred eCCcccccccccc
Q 046057 1071 RKTGGLYDTVFDV 1083 (1198)
Q Consensus 1071 t~tGGl~E~V~d~ 1083 (1198)
|+..|.--..++.
T Consensus 530 TNlSGFGcfMeeh 542 (692)
T KOG3742|consen 530 TNLSGFGCFMEEH 542 (692)
T ss_pred ccccchhhhHHHH
Confidence 9999976555543
No 124
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.31 E-value=0.00014 Score=86.44 Aligned_cols=205 Identities=11% Similarity=-0.018 Sum_probs=115.6
Q ss_pred HHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEE-Eec--CCc----------------hhhh--
Q 046057 817 FCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVF-TIH--NLE----------------FGTH-- 875 (1198)
Q Consensus 817 F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~-tIH--n~~----------------~~~~-- 875 (1198)
.+...+..+++...+||+|.+-. +.++.++... .++|+++ -+| |.. .+.-
T Consensus 79 ~~~~~~~~~~~~~~~p~~v~~~G---g~v~~~aA~~------~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~ 149 (396)
T TIGR03492 79 LTLGQWRALRKWAKKGDLIVAVG---DIVPLLFAWL------SGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYL 149 (396)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEC---cHHHHHHHHH------cCCCceEEEeeccceeecCCCCCccchhhhccCCCccC
Confidence 33445555555445999999854 3334444433 2778766 334 433 2111
Q ss_pred -H--HHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHH
Q 046057 876 -H--IGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQ 952 (1198)
Q Consensus 876 -l--i~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLr 952 (1198)
+ -+..-..|+.+.+-.+...+.+..++ .++..+=|-+=...... .+
T Consensus 150 p~e~n~l~~~~a~~v~~~~~~t~~~l~~~g------~k~~~vGnPv~d~l~~~---------------------~~---- 198 (396)
T TIGR03492 150 PWERWLMRSRRCLAVFVRDRLTARDLRRQG------VRASYLGNPMMDGLEPP---------------------ER---- 198 (396)
T ss_pred HHHHHHhhchhhCEEeCCCHHHHHHHHHCC------CeEEEeCcCHHhcCccc---------------------cc----
Confidence 1 12222578888888888777776432 14444433331111000 00
Q ss_pred HHhCCCCCCCc-EEEEEecCC--CccCHHHHHHHHHHhhc-CCcEEEEEe-cCCChhhHHHHHHHHHHhCCCC-------
Q 046057 953 QKVGLRKSDLP-LVGIITRLT--HQKGIHLIKHAIWRTLD-RGGQVVLLG-SAPDPRIQNDFVNLANELHSSH------- 1020 (1198)
Q Consensus 953 q~lGL~~~d~p-lIg~VGRL~--~qKGidlIleAl~~ll~-~~~qLVIvG-sgpdp~i~~~L~~la~eLgl~~------- 1020 (1198)
.+++ ++.+ ++++.|.-. ..+++..+++|+..+.+ ++++|++.- +..+ .+.+++...+++...
T Consensus 199 --~~l~-~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~---~~~~~~~l~~~g~~~~~~~~~~ 272 (396)
T TIGR03492 199 --KPLL-TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLS---LEKLQAILEDLGWQLEGSSEDQ 272 (396)
T ss_pred --cccC-CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCC---HHHHHHHHHhcCceecCCcccc
Confidence 0343 2333 444445542 35678899999998864 467776643 2222 344555555444321
Q ss_pred -----CCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCc
Q 046057 1021 -----ADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTG 1074 (1198)
Q Consensus 1021 -----~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tG 1074 (1198)
.+++.+...++ .+..+|+.||++|..| |.+.+|+|++|+|+|+-...
T Consensus 273 ~~~~~~~~~~v~~~~~--~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~ 324 (396)
T TIGR03492 273 TSLFQKGTLEVLLGRG--AFAEILHWADLGIAMA-----GTATEQAVGLGKPVIQLPGK 324 (396)
T ss_pred chhhccCceEEEechH--hHHHHHHhCCEEEECc-----CHHHHHHHHhCCCEEEEeCC
Confidence 11355544433 3689999999999986 56669999999999997643
No 125
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.24 E-value=0.00012 Score=82.99 Aligned_cols=121 Identities=14% Similarity=0.134 Sum_probs=82.0
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA 1040 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA 1040 (1198)
...+++++|..... .+++++..+ ++.+++++|... .. . .+.++++. .++.+.+..+++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~-~~-----------~---~~~ni~~~-~~~~~~~~~~m~ 249 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNA-AD-----------P---RPGNIHVR-PFSTPDFAELMA 249 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCc-cc-----------c---cCCCEEEe-ecChHHHHHHHH
Confidence 45688888888655 666777665 367888887641 00 0 03678864 555456789999
Q ss_pred HccEEEEcCCCCCCcHH-HHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEc--CCCHHHHHHHHh
Q 046057 1041 GADFILVPSIFEPCGLT-QLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFD--GADIAGVDYALN 1115 (1198)
Q Consensus 1041 ~ADi~LvPS~~EpfGLt-~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~--~~D~~~La~AL~ 1115 (1198)
.||++|.-+ |.+ ++||+++|+|.|+-...+..|-.. .|+.......|..++ .-+++.|.++|+
T Consensus 250 ~ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~-------~a~~l~~~G~~~~~~~~~~~~~~l~~~l~ 315 (318)
T PF13528_consen 250 AADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEY-------NARKLEELGLGIVLSQEDLTPERLAEFLE 315 (318)
T ss_pred hCCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHH-------HHHHHHHCCCeEEcccccCCHHHHHHHHh
Confidence 999999764 544 999999999999977655444433 233333335566654 557899999887
No 126
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.12 E-value=0.00035 Score=81.24 Aligned_cols=296 Identities=17% Similarity=0.102 Sum_probs=159.3
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
|||.+=.... ---.+...+.+.|.++||+|.|.+..++... ++ ....|++.
T Consensus 1 MkIwiDi~~p-------~hvhfFk~~I~eL~~~GheV~it~R~~~~~~-----~L-----------------L~~yg~~y 51 (335)
T PF04007_consen 1 MKIWIDITHP-------AHVHFFKNIIRELEKRGHEVLITARDKDETE-----EL-----------------LDLYGIDY 51 (335)
T ss_pred CeEEEECCCc-------hHHHHHHHHHHHHHhCCCEEEEEEeccchHH-----HH-----------------HHHcCCCe
Confidence 6776544322 2367889999999999999999998765321 11 11234444
Q ss_pred EEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHh-cCCCceEEEECCCChhH-HHHHHHHhhhhcCCCCCeEEEEe
Q 046057 790 YFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQ-GGFHPDIIHCHDWSSAP-VAWLFKDHYVHYGLSKARIVFTI 867 (1198)
Q Consensus 790 ~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~-~~~~PDVIH~Hdw~ta~-va~llk~~y~~~gl~~ipvV~tI 867 (1198)
..+... | ..-..+.........++++. ..++|||+.++.-..+. +++.+ ++|+|...
T Consensus 52 ~~iG~~----------g-~~~~~Kl~~~~~R~~~l~~~~~~~~pDv~is~~s~~a~~va~~l----------giP~I~f~ 110 (335)
T PF04007_consen 52 IVIGKH----------G-DSLYGKLLESIERQYKLLKLIKKFKPDVAISFGSPEAARVAFGL----------GIPSIVFN 110 (335)
T ss_pred EEEcCC----------C-CCHHHHHHHHHHHHHHHHHHHHhhCCCEEEecCcHHHHHHHHHh----------CCCeEEEe
Confidence 444321 1 01112222222222222222 13689999987643332 33221 88999888
Q ss_pred cCCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEE-eCCCCCCCCCCCCCCCCCcccccchhhhchHH
Q 046057 868 HNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGI-LNGIDQDMWDPFNDKFIPVSYTSENLVEGKRA 946 (1198)
Q Consensus 868 Hn~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI-~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~ 946 (1198)
.+-... ...+..+..||.+++.+-.-...+...+ . +-.+. +||++.-.|-.. |-|
T Consensus 111 D~e~a~-~~~~Lt~Pla~~i~~P~~~~~~~~~~~G---~---~~~i~~y~G~~E~ayl~~---F~P-------------- 166 (335)
T PF04007_consen 111 DTEHAI-AQNRLTLPLADVIITPEAIPKEFLKRFG---A---KNQIRTYNGYKELAYLHP---FKP-------------- 166 (335)
T ss_pred cCchhh-ccceeehhcCCeeECCcccCHHHHHhcC---C---cCCEEEECCeeeEEeecC---CCC--------------
Confidence 873211 1122234568888876544333333212 1 11334 888876544210 111
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEecCCCccC------HHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCC
Q 046057 947 AKEALQQKVGLRKSDLPLVGIITRLTHQKG------IHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSH 1020 (1198)
Q Consensus 947 ~k~aLrq~lGL~~~d~plIg~VGRL~~qKG------idlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~ 1020 (1198)
.....+++|++ +.+.|++ |..+.+- -.++-+.+..+.+.+-.+|++-...+ + ..+.+.++
T Consensus 167 -d~~vl~~lg~~--~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~---~---~~~~~~~~--- 232 (335)
T PF04007_consen 167 -DPEVLKELGLD--DEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED---Q---RELFEKYG--- 232 (335)
T ss_pred -ChhHHHHcCCC--CCCEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc---h---hhHHhccC---
Confidence 13567889976 3344432 5544332 12344566666555544666655421 1 22333222
Q ss_pred CCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEE
Q 046057 1021 ADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGF 1100 (1198)
Q Consensus 1021 ~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~ 1100 (1198)
+.+... .-..+.++.-||++|-- -|....||...|+|.|.+-.|-+ -.+... +.+.|.
T Consensus 233 ---~~i~~~--~vd~~~Ll~~a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~-~~vd~~-----------L~~~Gl 290 (335)
T PF04007_consen 233 ---VIIPPE--PVDGLDLLYYADLVIGG-----GGTMAREAALLGTPAISCFPGKL-LAVDKY-----------LIEKGL 290 (335)
T ss_pred ---ccccCC--CCCHHHHHHhcCEEEeC-----CcHHHHHHHHhCCCEEEecCCcc-hhHHHH-----------HHHCCC
Confidence 222211 11135789999999933 35677999999999998755421 112111 125699
Q ss_pred EEcCCCHHHHHHHHh
Q 046057 1101 SFDGADIAGVDYALN 1115 (1198)
Q Consensus 1101 lf~~~D~~~La~AL~ 1115 (1198)
++...|++++...+.
T Consensus 291 l~~~~~~~ei~~~v~ 305 (335)
T PF04007_consen 291 LYHSTDPDEIVEYVR 305 (335)
T ss_pred eEecCCHHHHHHHHH
Confidence 999999999987666
No 127
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.03 E-value=0.0001 Score=88.58 Aligned_cols=115 Identities=19% Similarity=0.072 Sum_probs=74.1
Q ss_pred HHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEc
Q 046057 951 LQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCL 1028 (1198)
Q Consensus 951 Lrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g 1028 (1198)
.|+.+||+ .+..++++..++. |=-...+++..++++ ++..|+|.... . ..+..+++.+.++|+. ++|+.|.+
T Consensus 275 ~R~~~gLp-~d~vvF~~fn~~~--KI~p~~l~~W~~IL~~vP~S~L~L~~~~-~-~~~~~l~~~~~~~Gv~-~~Ri~f~~ 348 (468)
T PF13844_consen 275 TRAQYGLP-EDAVVFGSFNNLF--KISPETLDLWARILKAVPNSRLWLLRFP-A-SGEARLRRRFAAHGVD-PDRIIFSP 348 (468)
T ss_dssp ETGGGT---SSSEEEEE-S-GG--G--HHHHHHHHHHHHHSTTEEEEEEETS-T-THHHHHHHHHHHTTS--GGGEEEEE
T ss_pred CHHHcCCC-CCceEEEecCccc--cCCHHHHHHHHHHHHhCCCcEEEEeeCC-H-HHHHHHHHHHHHcCCC-hhhEEEcC
Confidence 36789999 5777777777765 766677777777764 57888887653 2 2457888999999997 78999988
Q ss_pred cCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeC
Q 046057 1029 TYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRK 1072 (1198)
Q Consensus 1029 ~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~ 1072 (1198)
..+.+.--..|..+||+|=|.-| +-|.|.+||+.+|+|+|+..
T Consensus 349 ~~~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~ 391 (468)
T PF13844_consen 349 VAPREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLP 391 (468)
T ss_dssp ---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB--
T ss_pred CCCHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEecc
Confidence 76666555678999999988544 34689999999999888754
No 128
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.95 E-value=0.00042 Score=80.90 Aligned_cols=246 Identities=15% Similarity=0.101 Sum_probs=136.6
Q ss_pred hhHHHHHHHHHHHHHhcCCCceEEEEC-CCChhHHHHHHHHhhhhcCCCCCeEEEEecCC----ch----hhhHHHHHH-
Q 046057 812 ERFAFFCHAALEFLLQGGFHPDIIHCH-DWSSAPVAWLFKDHYVHYGLSKARIVFTIHNL----EF----GTHHIGKAM- 881 (1198)
Q Consensus 812 ~Rf~~F~~aale~L~~~~~~PDVIH~H-dw~ta~va~llk~~y~~~gl~~ipvV~tIHn~----~~----~~~li~~~~- 881 (1198)
...+.....+-.++.+. +||+|.++ |-.+++++.+.+... ++| |.++|.- +. ..+..+..+
T Consensus 50 ~~~~~~~~~~~~~~~~~--~Pd~Vlv~GD~~~~la~alaA~~~------~ip-v~HieaGlRs~d~~~g~~de~~R~~i~ 120 (346)
T PF02350_consen 50 KSTGLAIIELADVLERE--KPDAVLVLGDRNEALAAALAAFYL------NIP-VAHIEAGLRSGDRTEGMPDEINRHAID 120 (346)
T ss_dssp HHHHHHHHHHHHHHHHH--T-SEEEEETTSHHHHHHHHHHHHT------T-E-EEEES-----S-TTSSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--CCCEEEEEcCCchHHHHHHHHHHh------CCC-EEEecCCCCccccCCCCchhhhhhhhh
Confidence 34455555555666653 89988887 555566666665554 899 5566654 21 234455444
Q ss_pred hccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeC-CCCCCCCCCCCCCCCCcccccchhhhchHHHHHHH-HHHhCCCC
Q 046057 882 TYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILN-GIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEAL-QQKVGLRK 959 (1198)
Q Consensus 882 ~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~N-GID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aL-rq~lGL~~ 959 (1198)
+.|+.-.+.++.+++.+...+ .+.++++++=| ++|. +...+......+ ...+....
T Consensus 121 ~la~lhf~~t~~~~~~L~~~G---~~~~rI~~vG~~~~D~-------------------l~~~~~~~~~~~~~~~i~~~~ 178 (346)
T PF02350_consen 121 KLAHLHFAPTEEARERLLQEG---EPPERIFVVGNPGIDA-------------------LLQNKEEIEEKYKNSGILQDA 178 (346)
T ss_dssp HH-SEEEESSHHHHHHHHHTT-----GGGEEE---HHHHH-------------------HHHHHHTTCC-HHHHHHHHCT
T ss_pred hhhhhhccCCHHHHHHHHhcC---CCCCeEEEEChHHHHH-------------------HHHhHHHHhhhhhhHHHHhcc
Confidence 469999999999999998644 45667777633 2221 100000000001 11110011
Q ss_pred CCCcEEEEEecCCC---ccCHHHHHHHHHHhhcC-CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHH
Q 046057 960 SDLPLVGIITRLTH---QKGIHLIKHAIWRTLDR-GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLS 1035 (1198)
Q Consensus 960 ~d~plIg~VGRL~~---qKGidlIleAl~~ll~~-~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l 1035 (1198)
.+..+++..=|.+. ......|..++..+.+. ++++|+.... .+.....+.+...+ + ++++++..+.....
T Consensus 179 ~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn-~p~~~~~i~~~l~~----~-~~v~~~~~l~~~~~ 252 (346)
T PF02350_consen 179 PKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHN-NPRGSDIIIEKLKK----Y-DNVRLIEPLGYEEY 252 (346)
T ss_dssp TSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S--HHHHHHHHHHHTT------TTEEEE----HHHH
T ss_pred CCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecC-CchHHHHHHHHhcc----c-CCEEEECCCCHHHH
Confidence 23334444433332 34567788888888764 8888887753 34445555444432 3 48999999999889
Q ss_pred HHHHHHccEEEEcCCCCCCcHHHH-HHHHhCCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHH
Q 046057 1036 HLIYAGADFILVPSIFEPCGLTQL-VAMRYGSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYA 1113 (1198)
Q Consensus 1036 ~~iyA~ADi~LvPS~~EpfGLt~L-EAMa~G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~A 1113 (1198)
..+++.|+++|--| | .+. ||..+|+|+|. ++.|--++.+..+ ...++. .|++.+.++
T Consensus 253 l~ll~~a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~--------------~nvlv~-~~~~~I~~a 311 (346)
T PF02350_consen 253 LSLLKNADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERG--------------SNVLVG-TDPEAIIQA 311 (346)
T ss_dssp HHHHHHESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTT--------------SEEEET-SSHHHHHHH
T ss_pred HHHHhcceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhc--------------ceEEeC-CCHHHHHHH
Confidence 99999999999665 4 455 99999999998 6777777777664 344565 799999977
Q ss_pred Hh
Q 046057 1114 LN 1115 (1198)
Q Consensus 1114 L~ 1115 (1198)
|.
T Consensus 312 i~ 313 (346)
T PF02350_consen 312 IE 313 (346)
T ss_dssp HH
T ss_pred HH
Confidence 77
No 129
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.90 E-value=0.012 Score=69.79 Aligned_cols=277 Identities=16% Similarity=0.108 Sum_probs=164.5
Q ss_pred HHHHHHHhcCCCceEEEECC---CChhHHHHHHHHhhhhcCCCCCeEEEEecCCc--------hhhhHHHHHHhccCEEE
Q 046057 820 AALEFLLQGGFHPDIIHCHD---WSSAPVAWLFKDHYVHYGLSKARIVFTIHNLE--------FGTHHIGKAMTYADKAT 888 (1198)
Q Consensus 820 aale~L~~~~~~PDVIH~Hd---w~ta~va~llk~~y~~~gl~~ipvV~tIHn~~--------~~~~li~~~~~~AD~Vi 888 (1198)
++.+++.. .+||+++.-. |... +.... ..++|+++.-=-+. ....+.+..+...|.|+
T Consensus 114 ~v~rFl~~--~~P~l~Ii~EtElWPnl-----i~e~~----~~~~p~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li~ 182 (419)
T COG1519 114 AVRRFLRK--WRPKLLIIMETELWPNL-----INELK----RRGIPLVLVNARLSDRSFARYAKLKFLARLLFKNIDLIL 182 (419)
T ss_pred HHHHHHHh--cCCCEEEEEeccccHHH-----HHHHH----HcCCCEEEEeeeechhhhHHHHHHHHHHHHHHHhcceee
Confidence 35566665 4899766543 4322 22111 12778776543221 11346667788999999
Q ss_pred EeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEE
Q 046057 889 TVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGII 968 (1198)
Q Consensus 889 tVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~V 968 (1198)
+-|+-.++.+..-++ .. +.+.-| |-.+. .|. ..-....+.+|+.++.+ ++++++.
T Consensus 183 aQse~D~~Rf~~LGa---~~--v~v~GN-lKfd~-~~~---------------~~~~~~~~~~r~~l~~~---r~v~iaa 237 (419)
T COG1519 183 AQSEEDAQRFRSLGA---KP--VVVTGN-LKFDI-EPP---------------PQLAAELAALRRQLGGH---RPVWVAA 237 (419)
T ss_pred ecCHHHHHHHHhcCC---cc--eEEecc-eeecC-CCC---------------hhhHHHHHHHHHhcCCC---CceEEEe
Confidence 999999999975443 22 222211 11111 110 11224466788888743 5777777
Q ss_pred ecCCCccCHHHHHHHHHHhhcC--CcEEEEEecCCChhhHHHHHHHHHHhCCCCC-----------CcEEEEccCChHHH
Q 046057 969 TRLTHQKGIHLIKHAIWRTLDR--GGQVVLLGSAPDPRIQNDFVNLANELHSSHA-----------DRARLCLTYDEPLS 1035 (1198)
Q Consensus 969 GRL~~qKGidlIleAl~~ll~~--~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~-----------drV~f~g~~d~~~l 1035 (1198)
+. +..--+.+++++..++++ +..++++=--| +--+..+++++..|+++. .+|.+.-. --++
T Consensus 238 ST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHp--ERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dt--mGEL 311 (419)
T COG1519 238 ST--HEGEEEIILDAHQALKKQFPNLLLILVPRHP--ERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDT--MGEL 311 (419)
T ss_pred cC--CCchHHHHHHHHHHHHhhCCCceEEEecCCh--hhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEec--HhHH
Confidence 76 444566688898888864 57777775543 345678888888877521 13333222 2357
Q ss_pred HHHHHHccEEEEc-CCCCCCcHHHHHHHHhCCcEEEe-CCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHH
Q 046057 1036 HLIYAGADFILVP-SIFEPCGLTQLVAMRYGSIPVVR-KTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYA 1113 (1198)
Q Consensus 1036 ~~iyA~ADi~LvP-S~~EpfGLt~LEAMa~G~PvIvt-~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~A 1113 (1198)
..+|..||+.++- |..+--|-.+||+.++|+|+|.. .+--..|+... ......|+.++. .+.|+
T Consensus 312 ~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~----------l~~~ga~~~v~~--~~~l~-- 377 (419)
T COG1519 312 GLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAER----------LLQAGAGLQVED--ADLLA-- 377 (419)
T ss_pred HHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHH----------HHhcCCeEEECC--HHHHH--
Confidence 8999999997775 55566778999999999999984 33333333322 111244666654 66676
Q ss_pred HhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 046057 1114 LNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELY 1193 (1198)
Q Consensus 1114 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY 1193 (1198)
.+++.+..+++.+.++++++.+---.-....+++++..
T Consensus 378 ------------------------------------------~~v~~l~~~~~~r~~~~~~~~~~v~~~~gal~r~l~~l 415 (419)
T COG1519 378 ------------------------------------------KAVELLLADEDKREAYGRAGLEFLAQNRGALARTLEAL 415 (419)
T ss_pred ------------------------------------------HHHHHhcCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 55556667777778887777321112223445555544
Q ss_pred H
Q 046057 1194 R 1194 (1198)
Q Consensus 1194 ~ 1194 (1198)
.
T Consensus 416 ~ 416 (419)
T COG1519 416 K 416 (419)
T ss_pred h
Confidence 3
No 130
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.88 E-value=0.001 Score=80.42 Aligned_cols=115 Identities=17% Similarity=0.137 Sum_probs=89.0
Q ss_pred HHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEcc
Q 046057 952 QQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLT 1029 (1198)
Q Consensus 952 rq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~ 1029 (1198)
|..+||| ++..+++++++ .+|-...+.+--.++++ ++-.|+|.|+|+++.+...|+.++++.|+. .+|++|.+.
T Consensus 421 R~~lglp-~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~-~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLP-EDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVD-SERLRFLPP 496 (620)
T ss_pred hhhcCCC-CCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCC-hhheeecCC
Confidence 4567887 35545555544 45765555554444443 688899999988999999999999999997 689999999
Q ss_pred CChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1030 YDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1030 ~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
.+.+.-..-|.-||++|=+--| +-+.|.+||+.+|+|||+.
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~ 537 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTR 537 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeee
Confidence 8888878889999999976544 4458999999999988874
No 131
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=97.63 E-value=0.0013 Score=78.80 Aligned_cols=181 Identities=24% Similarity=0.246 Sum_probs=88.4
Q ss_pred CCCcHHHHHHHHHHHHHh--------CCC----eEEEEeeCCCCCcccccccccccccccCCC---ceeEEeeceecCeE
Q 046057 724 KVGGLGDVVTSLSRTVQD--------LNH----NVDIILPKYDCLKFSDVKDLGYNRSYHWGG---TEIKVWFGKVEGLS 788 (1198)
Q Consensus 724 kvGGl~~vV~~LarAL~~--------~GH----~V~VItP~y~~~~~~~~~~l~~~~~~~~g~---~~i~V~~~~~~Gv~ 788 (1198)
.+||--.||.++++||.. +|- .|.|+|.--+. ..-..+........+. ..+++.++.-.|+
T Consensus 294 DTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd---~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi- 369 (550)
T PF00862_consen 294 DTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPD---AKGTTCNQRLEKVSGTENARILRVPFGPEKGI- 369 (550)
T ss_dssp TSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TB---TTCGGGTSSEEEETTESSEEEEEE-ESESTEE-
T ss_pred CCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccC---CcCCCccccccccCCCCCcEEEEecCCCCcch-
Confidence 589999999999999975 344 47777743221 1111111111111111 1223333322221
Q ss_pred EEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEec
Q 046057 789 VYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIH 868 (1198)
Q Consensus 789 v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIH 868 (1198)
+. .+..+..+|.+ .++|. -.+..+++...+..||+||.|--..++++.++.... ++|.++|-|
T Consensus 370 ---~~---kwisrf~lWPy---Le~fa--~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~l------gv~~~~iaH 432 (550)
T PF00862_consen 370 ---LR---KWISRFDLWPY---LEEFA--DDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKL------GVTQCFIAH 432 (550)
T ss_dssp ---E----S---GGG-GGG---HHHHH--HHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHH------T-EEEEE-S
T ss_pred ---hh---hccchhhchhh---HHHHH--HHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhc------CCceehhhh
Confidence 11 12223333322 12222 233344455566799999999877899999999887 999999999
Q ss_pred CCchh-------------------hhHH--HHHHhccCEEEEeCHHHHHHHhCC----C------------------CCC
Q 046057 869 NLEFG-------------------THHI--GKAMTYADKATTVSHTYSKEVAGD----P------------------AIA 905 (1198)
Q Consensus 869 n~~~~-------------------~~li--~~~~~~AD~VitVS~~~a~el~~~----~------------------~l~ 905 (1198)
.+.-. +.+. .-+|++||.|||-+ .+|+.+. + -+.
T Consensus 433 sLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST---~QEI~g~~~~~gqyes~~~ftlpgLyrvv~Gi~ 509 (550)
T PF00862_consen 433 SLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITST---YQEIAGQKDTVGQYESHKAFTLPGLYRVVNGID 509 (550)
T ss_dssp S-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESS---HHHHHB-SSSBHTTGGGSSEEETTTEEEEES--
T ss_pred ccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcc---hHhhcCCccccCCccchhhcchHhHHhhhcccc
Confidence 98632 1111 13789999999843 4555431 0 012
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCC
Q 046057 906 PHLHKFYGILNGIDQDMWDPFND 928 (1198)
Q Consensus 906 ~~~~K~~vI~NGID~d~~~P~~D 928 (1198)
.-..|+-+|+.|+|.++|-|.++
T Consensus 510 vFdPkfNiv~PGad~~iyFpyt~ 532 (550)
T PF00862_consen 510 VFDPKFNIVSPGADESIYFPYTE 532 (550)
T ss_dssp TT-TTEEE------TTTS--TT-
T ss_pred ccCCcccccCCCCCcceecCCcc
Confidence 22457788888888888777543
No 132
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=97.62 E-value=0.013 Score=67.37 Aligned_cols=79 Identities=11% Similarity=0.109 Sum_probs=53.8
Q ss_pred CCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEE
Q 046057 1021 ADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGF 1100 (1198)
Q Consensus 1021 ~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~ 1100 (1198)
++++.+.+. .++.+..+|+.||++|.-+-+ .++.||+++|+|+|+-...+..|...+ |+.......|.
T Consensus 228 ~~~v~~~~~-~~~~~~~~l~~ad~vI~~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~n-------a~~l~~~g~~~ 295 (321)
T TIGR00661 228 NENVEIRRI-TTDNFKELIKNAELVITHGGF----SLISEALSLGKPLIVIPDLGQFEQGNN-------AVKLEDLGCGI 295 (321)
T ss_pred CCCEEEEEC-ChHHHHHHHHhCCEEEECCCh----HHHHHHHHcCCCEEEEcCCCcccHHHH-------HHHHHHCCCEE
Confidence 367888754 434578999999999987632 578999999999999777654443322 11111225688
Q ss_pred EEcCCCHHHHH
Q 046057 1101 SFDGADIAGVD 1111 (1198)
Q Consensus 1101 lf~~~D~~~La 1111 (1198)
.++..+.+.+.
T Consensus 296 ~l~~~~~~~~~ 306 (321)
T TIGR00661 296 ALEYKELRLLE 306 (321)
T ss_pred EcChhhHHHHH
Confidence 88887874443
No 133
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.56 E-value=0.0074 Score=70.72 Aligned_cols=198 Identities=17% Similarity=0.100 Sum_probs=118.4
Q ss_pred CCceEEEECCCChh--HHHHHHHHhhhhcCCCCCeEEEEecCCchh--hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCC
Q 046057 830 FHPDIIHCHDWSSA--PVAWLFKDHYVHYGLSKARIVFTIHNLEFG--THHIGKAMTYADKATTVSHTYSKEVAGDPAIA 905 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta--~va~llk~~y~~~gl~~ipvV~tIHn~~~~--~~li~~~~~~AD~VitVS~~~a~el~~~~~l~ 905 (1198)
.+||++.+-|.... .++..++... .++|+|..+-=.-|. .........++|.+.++=|.-...+...+.
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~-----p~i~iihYV~PsVWAWr~~Ra~~i~~~~D~lLailPFE~~~y~k~g~-- 156 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAG-----PKIKIIHYVSPSVWAWRPKRAVKIAKYVDHLLAILPFEPAFYDKFGL-- 156 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhC-----CCCCeEEEECcceeeechhhHHHHHHHhhHeeeecCCCHHHHHhcCC--
Confidence 58999998875433 3333333332 357877777644332 234556668899999999988877764331
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEec-CCC-ccCHHHHHHH
Q 046057 906 PHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITR-LTH-QKGIHLIKHA 983 (1198)
Q Consensus 906 ~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGR-L~~-qKGidlIleA 983 (1198)
..+.|=+-+ .|. +| -...|.++|+++|++...+.+.+..|. -.. ..-...+++|
T Consensus 157 ----~~~yVGHpl--------~d~-i~-----------~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a 212 (381)
T COG0763 157 ----PCTYVGHPL--------ADE-IP-----------LLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQA 212 (381)
T ss_pred ----CeEEeCChh--------hhh-cc-----------ccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHH
Confidence 112221111 110 00 012356689999999655556666654 333 3457778888
Q ss_pred HHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHH
Q 046057 984 IWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVA 1061 (1198)
Q Consensus 984 l~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEA 1061 (1198)
+..+.. ++.+||+--..+ ..+....+....-.. .+..-+.+...+..++.||+.+..| |.+.||+
T Consensus 213 ~~~l~~~~~~~~~vlp~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~a~~~aD~al~aS-----GT~tLE~ 279 (381)
T COG0763 213 AQELKARYPDLKFVLPLVNA--KYRRIIEEALKWEVA------GLSLILIDGEKRKAFAAADAALAAS-----GTATLEA 279 (381)
T ss_pred HHHHHhhCCCceEEEecCcH--HHHHHHHHHhhcccc------CceEEecCchHHHHHHHhhHHHHhc-----cHHHHHH
Confidence 888874 478888865431 112222222221110 1111223445678999999998776 8999999
Q ss_pred HHhCCcEEEe
Q 046057 1062 MRYGSIPVVR 1071 (1198)
Q Consensus 1062 Ma~G~PvIvt 1071 (1198)
|.+|+|.|++
T Consensus 280 aL~g~P~Vv~ 289 (381)
T COG0763 280 ALAGTPMVVA 289 (381)
T ss_pred HHhCCCEEEE
Confidence 9999999985
No 134
>PF03370 CBM_21: Putative phosphatase regulatory subunit; InterPro: IPR005036 This family consists of several eukaryotic proteins that are thought to be involved in the regulation of glycogen metabolism. For instance, the mouse PTG protein O08541 from SWISSPROT has been shown to interact with glycogen synthase, phosphorylase kinase, phosphorylase a: these three enzymes have key roles in the regulation of glycogen metabolism. PTG also binds the catalytic subunit of protein phosphatase 1 (PP1C) and localizes it to glycogen. Subsets of similar interactions have been observed with several other members of this family, such as the yeast PIG1, PIG2, GAC1 and GIP2 proteins. While the precise function of these proteins is not known, they may serve a scaffold function, bringing together the key enzymes in glycogen metabolism. This entry is a carbohydrate binding domain.; GO: 0005515 protein binding; PDB: 2V8M_D 2V8L_A 2VQ4_A 2EEF_A 2DJM_A.
Probab=97.26 E-value=0.00035 Score=69.08 Aligned_cols=76 Identities=21% Similarity=0.345 Sum_probs=51.7
Q ss_pred CCCCCCceEEEEEeCCCCCCccceeeecc----ccCCCC-CeEEEEEEecCC----ceEEEEEEecCCCCCCccccCCCC
Q 046057 463 SLAHAKELWIHGGYNNWKDGLSIVARLVS----SERTDG-DWWYAKVSVPDQ----ALVLDWVFADGPPGKAIVYDNNSR 533 (1198)
Q Consensus 463 ~L~ga~~I~lh~G~N~W~~~~~~~~~l~~----~~~~~g-~ww~atV~VP~~----A~~ldFvFsD~~~~~~~~wDNN~g 533 (1198)
.|+-..+|.+|+-+|+|..-.+....-.. .....+ |-|..++.+|.. ...+.||..-.. .+..-||||+|
T Consensus 29 NlayeK~V~VryT~D~W~t~~d~~a~y~~~~~~~~~~~~~d~F~F~i~l~~~~~~~~~~lef~I~Y~~-~g~eyWDNN~g 107 (113)
T PF03370_consen 29 NLAYEKEVTVRYTFDNWRTFSDVPASYVSSCPGPSPSGNYDRFSFSIPLPDLLPPEGGRLEFCIRYEV-NGQEYWDNNNG 107 (113)
T ss_dssp -SSSSEEEEEEEETSCTSSCCEEEEEEEE---EESTTSSEEEEEEEEE-SSE--T-TS-SEEEEEEEE-TTEEEEESTTT
T ss_pred cCCCCeEEEEEEeeCCCCceeEEeeEEeccccCCCCCCcccEEEEEEECCcccccCCceEEEEEEEEe-CCCEEecCCCc
Confidence 46778899999999999866543222222 111122 668999999876 567999998876 45679999999
Q ss_pred cceEEE
Q 046057 534 QDFHAI 539 (1198)
Q Consensus 534 ~dyh~~ 539 (1198)
+||++.
T Consensus 108 ~NY~v~ 113 (113)
T PF03370_consen 108 KNYQVK 113 (113)
T ss_dssp T-EEE-
T ss_pred cceEEC
Confidence 999873
No 135
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.07 E-value=0.056 Score=67.22 Aligned_cols=199 Identities=12% Similarity=0.146 Sum_probs=115.3
Q ss_pred CCceEEEECCCChhH--HHHHHHHhhhhcCCCCCeEEEEecCCch--hhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCC
Q 046057 830 FHPDIIHCHDWSSAP--VAWLFKDHYVHYGLSKARIVFTIHNLEF--GTHHIGKAMTYADKATTVSHTYSKEVAGDPAIA 905 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~--va~llk~~y~~~gl~~ipvV~tIHn~~~--~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~ 905 (1198)
.+||++.+-|....- ++..+++. | .++|+|+.+-=--+ ...-++..-+++|.++++=|.-.+.+..++.
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~----G-i~ipviyYVsPqVWAWR~~Rikki~k~vD~ll~IfPFE~~~y~~~gv-- 381 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKR----G-YKGKIVHYVCPSIWAWRPKRKTILEKYLDLLLLILPFEQNLFKDSPL-- 381 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhc----C-CCCCEEEEECccceeeCcchHHHHHHHhhhheecCccCHHHHHhcCC--
Confidence 589999998865432 33333322 1 12588777754332 2345566667899999998887777764332
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEE-EEe-cCCC-ccCHHHHHH
Q 046057 906 PHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVG-IIT-RLTH-QKGIHLIKH 982 (1198)
Q Consensus 906 ~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg-~VG-RL~~-qKGidlIle 982 (1198)
+...|=|.+ .|. ++. ...+.+.++++|+++ +.++|+ ..| |-.+ .+.+..+++
T Consensus 382 ----~v~yVGHPL--------~d~-i~~-----------~~~~~~~r~~lgl~~-~~~iIaLLPGSR~~EI~rllPv~l~ 436 (608)
T PRK01021 382 ----RTVYLGHPL--------VET-ISS-----------FSPNLSWKEQLHLPS-DKPIVAAFPGSRRGDILRNLTIQVQ 436 (608)
T ss_pred ----CeEEECCcH--------Hhh-ccc-----------CCCHHHHHHHcCCCC-CCCEEEEECCCCHHHHHHHHHHHHH
Confidence 222222211 111 000 012345688899963 555543 334 4433 445778888
Q ss_pred HHH--HhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHH
Q 046057 983 AIW--RTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLV 1060 (1198)
Q Consensus 983 Al~--~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LE 1060 (1198)
|+. .+. ++.++++... .+...+.++++.+..+. -.+.+...- ..+.++++||+.+..| |.+.||
T Consensus 437 aa~~~~l~-~~l~fvvp~a--~~~~~~~i~~~~~~~~~---~~~~ii~~~---~~~~~m~aaD~aLaaS-----GTaTLE 502 (608)
T PRK01021 437 AFLASSLA-STHQLLVSSA--NPKYDHLILEVLQQEGC---LHSHIVPSQ---FRYELMRECDCALAKC-----GTIVLE 502 (608)
T ss_pred HHHHHHhc-cCeEEEEecC--chhhHHHHHHHHhhcCC---CCeEEecCc---chHHHHHhcCeeeecC-----CHHHHH
Confidence 887 443 4578877433 22233455655542221 123433221 2368999999999987 899999
Q ss_pred HHHhCCcEEE-eCCc
Q 046057 1061 AMRYGSIPVV-RKTG 1074 (1198)
Q Consensus 1061 AMa~G~PvIv-t~tG 1074 (1198)
|+.+|+|.|+ -+++
T Consensus 503 aAL~g~PmVV~YK~s 517 (608)
T PRK01021 503 TALNQTPTIVTCQLR 517 (608)
T ss_pred HHHhCCCEEEEEecC
Confidence 9999999998 3443
No 136
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.04 E-value=0.026 Score=66.82 Aligned_cols=199 Identities=18% Similarity=0.143 Sum_probs=116.2
Q ss_pred CCceEEEECCCChhH--HHHHHHHhhhhcCCCCCeEEEEecCCch--hhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCC
Q 046057 830 FHPDIIHCHDWSSAP--VAWLFKDHYVHYGLSKARIVFTIHNLEF--GTHHIGKAMTYADKATTVSHTYSKEVAGDPAIA 905 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~--va~llk~~y~~~gl~~ipvV~tIHn~~~--~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~ 905 (1198)
.+||++.+-|....- ++..++.. + .++|+|+.|-=--+ .....+..-+++|.++++=|.-.+.+..++.
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~----~-~~~~viyYI~PqvWAWr~~R~~~i~~~~D~ll~ifPFE~~~y~~~g~-- 153 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKR----G-IPIKVIYYISPQVWAWRPGRAKKIKKYVDHLLVIFPFEPEFYKKHGV-- 153 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHh----C-CCceEEEEECCceeeeCccHHHHHHHHHhheeECCcccHHHHhccCC--
Confidence 589999988865432 33333332 1 13347776653322 2345556667899999998888777765431
Q ss_pred CCCCcEEEEeCCC-CCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcE-EEEEe-cCCC-ccCHHHHH
Q 046057 906 PHLHKFYGILNGI-DQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPL-VGIIT-RLTH-QKGIHLIK 981 (1198)
Q Consensus 906 ~~~~K~~vI~NGI-D~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~pl-Ig~VG-RL~~-qKGidlIl 981 (1198)
+...|=|.+ |. ..+. ..+...++.+ ++. +.++ .+..| |-.. .+.+..++
T Consensus 154 ----~~~~VGHPl~d~--~~~~-------------------~~~~~~~~~~-l~~-~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 154 ----PVTYVGHPLLDE--VKPE-------------------PDRAEAREKL-LDP-DKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred ----CeEEECCcchhh--hccC-------------------CCHHHHHHhc-CCC-CCcEEEEeCCCCHHHHHHHHHHHH
Confidence 223222221 11 0110 0134445666 764 4554 44444 4433 34568889
Q ss_pred HHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHH
Q 046057 982 HAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQL 1059 (1198)
Q Consensus 982 eAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~L 1059 (1198)
+++..+.+ ++++|++.... ......+.......+. .+.+... ......+++.||+.++.| |.+.|
T Consensus 207 ~aa~~l~~~~p~l~fvvp~a~--~~~~~~i~~~~~~~~~----~~~~~~~--~~~~~~~m~~ad~al~~S-----GTaTL 273 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQFVVPVAP--EVHEELIEEILAEYPP----DVSIVII--EGESYDAMAAADAALAAS-----GTATL 273 (373)
T ss_pred HHHHHHHHhCCCeEEEEecCC--HHHHHHHHHHHHhhCC----CCeEEEc--CCchHHHHHhCcchhhcC-----CHHHH
Confidence 99988875 47888876542 2223335555544332 2222222 222467899999999987 89999
Q ss_pred HHHHhCCcEEE-eCCcc
Q 046057 1060 VAMRYGSIPVV-RKTGG 1075 (1198)
Q Consensus 1060 EAMa~G~PvIv-t~tGG 1075 (1198)
||+.+|+|.|+ -+++.
T Consensus 274 E~Al~g~P~Vv~Yk~~~ 290 (373)
T PF02684_consen 274 EAALLGVPMVVAYKVSP 290 (373)
T ss_pred HHHHhCCCEEEEEcCcH
Confidence 99999999998 44443
No 137
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.02 E-value=0.054 Score=64.92 Aligned_cols=125 Identities=15% Similarity=0.089 Sum_probs=78.5
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA 1040 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA 1040 (1198)
..++++..|..... .+++..++..+.+-+.++|+...+.+. . . ...|+++.....++. ..++.
T Consensus 237 ~~~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~~----~------~--~~~p~n~~v~~~~p~---~~~l~ 299 (406)
T COG1819 237 RPIVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGARD----T------L--VNVPDNVIVADYVPQ---LELLP 299 (406)
T ss_pred CCeEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEecccccc----c------c--ccCCCceEEecCCCH---HHHhh
Confidence 34455666766544 555555555555568888886543110 0 0 123788888777765 35899
Q ss_pred HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEc--CCCHHHHHHHHh
Q 046057 1041 GADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFD--GADIAGVDYALN 1115 (1198)
Q Consensus 1041 ~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~--~~D~~~La~AL~ 1115 (1198)
.||++|... --.+..||++.|+|.|+-..+ .|--.+ -.|++.. ..|.... ...++.|..+|+
T Consensus 300 ~ad~vI~hG----G~gtt~eaL~~gvP~vv~P~~--~DQ~~n----A~rve~~---G~G~~l~~~~l~~~~l~~av~ 363 (406)
T COG1819 300 RADAVIHHG----GAGTTSEALYAGVPLVVIPDG--ADQPLN----AERVEEL---GAGIALPFEELTEERLRAAVN 363 (406)
T ss_pred hcCEEEecC----CcchHHHHHHcCCCEEEecCC--cchhHH----HHHHHHc---CCceecCcccCCHHHHHHHHH
Confidence 999999764 336789999999999996655 222111 1122332 4566665 678888887776
No 138
>PF03370 CBM_21: Putative phosphatase regulatory subunit; InterPro: IPR005036 This family consists of several eukaryotic proteins that are thought to be involved in the regulation of glycogen metabolism. For instance, the mouse PTG protein O08541 from SWISSPROT has been shown to interact with glycogen synthase, phosphorylase kinase, phosphorylase a: these three enzymes have key roles in the regulation of glycogen metabolism. PTG also binds the catalytic subunit of protein phosphatase 1 (PP1C) and localizes it to glycogen. Subsets of similar interactions have been observed with several other members of this family, such as the yeast PIG1, PIG2, GAC1 and GIP2 proteins. While the precise function of these proteins is not known, they may serve a scaffold function, bringing together the key enzymes in glycogen metabolism. This entry is a carbohydrate binding domain.; GO: 0005515 protein binding; PDB: 2V8M_D 2V8L_A 2VQ4_A 2EEF_A 2DJM_A.
Probab=96.94 E-value=0.0013 Score=65.09 Aligned_cols=71 Identities=24% Similarity=0.405 Sum_probs=49.2
Q ss_pred CCCCCCcEEEEeecCCccccccceecccc-----cCCC--CeEEEEEEecCC----ceeEeEEEEc---CCcccccCCCC
Q 046057 288 TLKNEPDVLIMGAFNDWRWKSFTFRLNKT-----HLKG--DWWSCQVHVPKE----AFKIDFVFFN---GQNIYENNDQK 353 (1198)
Q Consensus 288 ~L~~~~~v~ih~GfN~W~~~~~~~~~~~t-----~~~~--dWw~~~v~VP~~----A~~lnFvF~d---g~~~wDNN~g~ 353 (1198)
.|+-+-.|.++|-+|+|+-..+....... ..++ |=|..+|.+|+. ..++.||..- |..-||||+|+
T Consensus 29 NlayeK~V~VryT~D~W~t~~d~~a~y~~~~~~~~~~~~~d~F~F~i~l~~~~~~~~~~lef~I~Y~~~g~eyWDNN~g~ 108 (113)
T PF03370_consen 29 NLAYEKEVTVRYTFDNWRTFSDVPASYVSSCPGPSPSGNYDRFSFSIPLPDLLPPEGGRLEFCIRYEVNGQEYWDNNNGK 108 (113)
T ss_dssp -SSSSEEEEEEEETSCTSSCCEEEEEEEE---EESTTSSEEEEEEEEE-SSE--T-TS-SEEEEEEEETTEEEEESTTTT
T ss_pred cCCCCeEEEEEEeeCCCCceeEEeeEEeccccCCCCCCcccEEEEEEECCcccccCCceEEEEEEEEeCCCEEecCCCcc
Confidence 35667799999999999876654433333 2223 349999999887 5678998864 58899999999
Q ss_pred ceEEE
Q 046057 354 DFCIA 358 (1198)
Q Consensus 354 d~~~~ 358 (1198)
||.+.
T Consensus 109 NY~v~ 113 (113)
T PF03370_consen 109 NYQVK 113 (113)
T ss_dssp -EEE-
T ss_pred ceEEC
Confidence 99873
No 139
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=96.92 E-value=0.21 Score=61.67 Aligned_cols=122 Identities=8% Similarity=-0.032 Sum_probs=73.8
Q ss_pred CcEEEEEecCCC-----ccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 962 LPLVGIITRLTH-----QKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 962 ~plIg~VGRL~~-----qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
.++++..|.... .+-+..+++|+..+ +.++|+...+... . .++ |++|.+..+++. .
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~~---~--------~~~--p~Nv~i~~w~Pq---~ 357 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEVE---A--------INL--PANVLTQKWFPQ---R 357 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCcC---c--------ccC--CCceEEecCCCH---H
Confidence 467777787643 22345566666554 4677765543111 0 122 689999888876 3
Q ss_pred HHH--HHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCC--CHHHHHH
Q 046057 1037 LIY--AGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVDY 1112 (1198)
Q Consensus 1037 ~iy--A~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La~ 1112 (1198)
.++ ..++++|. -+-..+.+||+.+|+|.|+-...+ |-..+. .|.+.. +.|..++.. +.+.|.+
T Consensus 358 ~lL~hp~v~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~--DQ~~Na----~rv~~~---G~G~~l~~~~~t~~~l~~ 424 (507)
T PHA03392 358 AVLKHKNVKAFVT----QGGVQSTDEAIDALVPMVGLPMMG--DQFYNT----NKYVEL---GIGRALDTVTVSAAQLVL 424 (507)
T ss_pred HHhcCCCCCEEEe----cCCcccHHHHHHcCCCEEECCCCc--cHHHHH----HHHHHc---CcEEEeccCCcCHHHHHH
Confidence 566 45888883 345578999999999999965532 333221 122222 457777643 5567776
Q ss_pred HHh
Q 046057 1113 ALN 1115 (1198)
Q Consensus 1113 AL~ 1115 (1198)
||.
T Consensus 425 ai~ 427 (507)
T PHA03392 425 AIV 427 (507)
T ss_pred HHH
Confidence 665
No 140
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.80 E-value=0.4 Score=56.80 Aligned_cols=232 Identities=16% Similarity=0.102 Sum_probs=138.2
Q ss_pred CCceEEEECC-CChhHHHHHHHHhhhhcCCCCCeEEEEecCCc-----hhhhHHHHHH-hccCEEEEeCHHHHHHHhCCC
Q 046057 830 FHPDIIHCHD-WSSAPVAWLFKDHYVHYGLSKARIVFTIHNLE-----FGTHHIGKAM-TYADKATTVSHTYSKEVAGDP 902 (1198)
Q Consensus 830 ~~PDVIH~Hd-w~ta~va~llk~~y~~~gl~~ipvV~tIHn~~-----~~~~li~~~~-~~AD~VitVS~~~a~el~~~~ 902 (1198)
.+||+|..|. -.+.+++.+.. .|. ++|+....=++. +.-...+... ..||.-.+.+....+.+...+
T Consensus 91 ~kPD~VlVhGDT~t~lA~alaa-~~~-----~IpV~HvEAGlRt~~~~~PEE~NR~l~~~~S~~hfapte~ar~nLl~EG 164 (383)
T COG0381 91 EKPDLVLVHGDTNTTLAGALAA-FYL-----KIPVGHVEAGLRTGDLYFPEEINRRLTSHLSDLHFAPTEIARKNLLREG 164 (383)
T ss_pred hCCCEEEEeCCcchHHHHHHHH-HHh-----CCceEEEecccccCCCCCcHHHHHHHHHHhhhhhcCChHHHHHHHHHcC
Confidence 5899999984 55555554433 332 788877654432 2222233322 347777888888888887655
Q ss_pred CCCCCCCcEEEEeCCC-CCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHH-hCCCCCCCcEEEEEecCC-CccCHHH
Q 046057 903 AIAPHLHKFYGILNGI-DQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQK-VGLRKSDLPLVGIITRLT-HQKGIHL 979 (1198)
Q Consensus 903 ~l~~~~~K~~vI~NGI-D~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~-lGL~~~d~plIg~VGRL~-~qKGidl 979 (1198)
. ...+++++=|-+ |.-.+. ..+.......... ++.. .++.+++..=|.+ ..+++..
T Consensus 165 ~---~~~~IfvtGnt~iDal~~~-----------------~~~~~~~~~~~~~~~~~~-~~~~iLvT~HRreN~~~~~~~ 223 (383)
T COG0381 165 V---PEKRIFVTGNTVIDALLNT-----------------RDRVLEDSKILAKGLDDK-DKKYILVTAHRRENVGEPLEE 223 (383)
T ss_pred C---CccceEEeCChHHHHHHHH-----------------HhhhccchhhHHhhhccc-cCcEEEEEcchhhcccccHHH
Confidence 3 344677765542 211000 0000001111122 2222 1234444444443 3489999
Q ss_pred HHHHHHHhhcC--CcEEEEEecCCChhhHHHHHHHH-HHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcH
Q 046057 980 IKHAIWRTLDR--GGQVVLLGSAPDPRIQNDFVNLA-NELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGL 1056 (1198)
Q Consensus 980 IleAl~~ll~~--~~qLVIvGsgpdp~i~~~L~~la-~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGL 1056 (1198)
|++|+.++.+. +.++|.-=. +. ..+++.. ..|+. .++|.++.+++-...+.++..|-+++--| |-
T Consensus 224 i~~al~~i~~~~~~~~viyp~H-~~----~~v~e~~~~~L~~--~~~v~li~pl~~~~f~~L~~~a~~iltDS-----Gg 291 (383)
T COG0381 224 ICEALREIAEEYPDVIVIYPVH-PR----PRVRELVLKRLKN--VERVKLIDPLGYLDFHNLMKNAFLILTDS-----GG 291 (383)
T ss_pred HHHHHHHHHHhCCCceEEEeCC-CC----hhhhHHHHHHhCC--CCcEEEeCCcchHHHHHHHHhceEEEecC-----Cc
Confidence 99999999864 455555332 33 3333444 33443 46899999999888899999997777555 56
Q ss_pred HHHHHHHhCCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1057 TQLVAMRYGSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1057 t~LEAMa~G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+=||-..|+||++ +++---+|.+..+ +...-+.+.+.+.+++.
T Consensus 292 iqEEAp~lg~Pvl~lR~~TERPE~v~ag---------------t~~lvg~~~~~i~~~~~ 336 (383)
T COG0381 292 IQEEAPSLGKPVLVLRDTTERPEGVEAG---------------TNILVGTDEENILDAAT 336 (383)
T ss_pred hhhhHHhcCCcEEeeccCCCCccceecC---------------ceEEeCccHHHHHHHHH
Confidence 78999999999998 6655566666543 44445667777775554
No 141
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.77 E-value=2.1 Score=51.92 Aligned_cols=183 Identities=15% Similarity=0.148 Sum_probs=100.8
Q ss_pred CCCeEEEEecCCchh-----hhHHHHHHhccCEEEEeCHHHHH-HHhCCCCCCCCCCcEEEEeCCCCCCCC-CCCCCCCC
Q 046057 859 SKARIVFTIHNLEFG-----THHIGKAMTYADKATTVSHTYSK-EVAGDPAIAPHLHKFYGILNGIDQDMW-DPFNDKFI 931 (1198)
Q Consensus 859 ~~ipvV~tIHn~~~~-----~~li~~~~~~AD~VitVS~~~a~-el~~~~~l~~~~~K~~vI~NGID~d~~-~P~~D~~L 931 (1198)
.+.|+++.-+++.+. ..+.+..++.+|.|++ -...+. .+.. ++....++.+. .|+-+- .|....+.
T Consensus 147 ~gkpv~l~gqsiGPf~~~~~r~l~r~vl~~~~~Itv-RD~~S~~~Lk~---lGv~~~~v~~~---aDpAF~L~~~~~~~~ 219 (426)
T PRK10017 147 AKKPLYMIGHSVGPFQDEQFNQLANYVFGHCDALIL-RESVSLDLMKR---SNITTAKVEHG---VDTAWLVDHHTEDFT 219 (426)
T ss_pred cCCCEEEECCcCCCcCCHHHHHHHHHHHhcCCEEEE-ccHHHHHHHHH---hCCCccceEEe---cChhhhCCccccccc
Confidence 388999999998765 3466677888988554 333333 3322 22323344433 344331 11100000
Q ss_pred CcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEec-CCC-cc--------CHHHHHHHHHHhhcCCcEEEEEecCC
Q 046057 932 PVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITR-LTH-QK--------GIHLIKHAIWRTLDRGGQVVLLGSAP 1001 (1198)
Q Consensus 932 p~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGR-L~~-qK--------GidlIleAl~~ll~~~~qLVIvGsgp 1001 (1198)
| ..++...++.. ...++|++.-| +.+ .| -...+.+++..+.+++.+++++-...
T Consensus 220 ~---------------~~~~~~~~~~~-~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~ 283 (426)
T PRK10017 220 A---------------SYAVQHWLDVA-AQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCT 283 (426)
T ss_pred c---------------chhhhhhhccc-ccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 0 00111122222 23456666544 321 11 12456677777777788888765321
Q ss_pred -----ChhhHHHHHHHHHHhCCCCCCcEEEE-ccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1002 -----DPRIQNDFVNLANELHSSHADRARLC-LTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1002 -----dp~i~~~L~~la~eLgl~~~drV~f~-g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
.+.......++.+.+. +++++++. ..++..++..+++.||++|-.-++ .++-|+..|+|+|+-
T Consensus 284 ~~~~~~~dD~~~~~~l~~~~~--~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-----a~I~a~~~gvP~i~i 352 (426)
T PRK10017 284 GIDSYNKDDRMVALNLRQHVS--DPARYHVVMDELNDLEMGKILGACELTVGTRLH-----SAIISMNFGTPAIAI 352 (426)
T ss_pred CccCCCCchHHHHHHHHHhcc--cccceeEecCCCChHHHHHHHhhCCEEEEecch-----HHHHHHHcCCCEEEe
Confidence 1112233455656554 24555543 346666778999999998866554 578899999999983
No 142
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.47 E-value=1.2 Score=52.37 Aligned_cols=134 Identities=14% Similarity=0.164 Sum_probs=77.7
Q ss_pred CcEEEEEecCCCccCHHHHHHHHHHhhc-CCcE---EEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHH
Q 046057 962 LPLVGIITRLTHQKGIHLIKHAIWRTLD-RGGQ---VVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHL 1037 (1198)
Q Consensus 962 ~plIg~VGRL~~qKGidlIleAl~~ll~-~~~q---LVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~ 1037 (1198)
..+++.+|- .+-|-+++-.+++.... .+++ +++.|.- -| +..++.+...-.- .+++.+.-..++ +..
T Consensus 220 ~~Ilvs~GG--G~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~-MP--~~~r~~l~~~A~~--~p~i~I~~f~~~--~~~ 290 (400)
T COG4671 220 FDILVSVGG--GADGAELIETALAAAQLLAGLNHKWLIVTGPF-MP--EAQRQKLLASAPK--RPHISIFEFRND--FES 290 (400)
T ss_pred ceEEEecCC--ChhhHHHHHHHHHHhhhCCCCCcceEEEeCCC-CC--HHHHHHHHHhccc--CCCeEEEEhhhh--HHH
Confidence 446666664 34676666665544432 3333 5666643 22 2444455443222 256777544333 468
Q ss_pred HHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEE--eCCccccccccccccchhhhhccCCCCcEEEE-cCCCHHHHHHHH
Q 046057 1038 IYAGADFILVPSIFEPCGLTQLVAMRYGSIPVV--RKTGGLYDTVFDVDHDKERAQALDLEPNGFSF-DGADIAGVDYAL 1114 (1198)
Q Consensus 1038 iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIv--t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf-~~~D~~~La~AL 1114 (1198)
++++|+..|.-+-| .|.+|-++.|+|.++ +..++-..++.. .|.+..|+ ..++. +.-.++.|+++|
T Consensus 291 ll~gA~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA-----~Rl~~LGL--~dvL~pe~lt~~~La~al 359 (400)
T COG4671 291 LLAGARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRA-----QRLEELGL--VDVLLPENLTPQNLADAL 359 (400)
T ss_pred HHHhhheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHH-----HHHHhcCc--ceeeCcccCChHHHHHHH
Confidence 89999999966544 688999999999987 344444333332 13333443 22232 455688999999
Q ss_pred h
Q 046057 1115 N 1115 (1198)
Q Consensus 1115 ~ 1115 (1198)
.
T Consensus 360 ~ 360 (400)
T COG4671 360 K 360 (400)
T ss_pred H
Confidence 8
No 143
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.40 E-value=0.18 Score=64.38 Aligned_cols=260 Identities=15% Similarity=0.127 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---------hhHHHHHHhccCE
Q 046057 816 FFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG---------THHIGKAMTYADK 886 (1198)
Q Consensus 816 ~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~---------~~li~~~~~~AD~ 886 (1198)
.|+..+++.+. .-|+|-+||.+.-++|-+++... .++.+-+..|..... +.-+-.++.++|.
T Consensus 129 ~f~d~ive~~~----~~d~vwihdyhlmllp~~lr~~~-----~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~ 199 (732)
T KOG1050|consen 129 AFADKIVEVYE----EGDIVWIHDYHLMLLPQMLRERF-----NSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDL 199 (732)
T ss_pred HHHHHHHHhcc----CCCcEEEEcchhhccchhhhccc-----ccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCc
Confidence 34444444443 57899999988888887777654 366777888876654 2334457778887
Q ss_pred EEEeCHHHHHHHhC---------------CCCC--CCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHH
Q 046057 887 ATTVSHTYSKEVAG---------------DPAI--APHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKE 949 (1198)
Q Consensus 887 VitVS~~~a~el~~---------------~~~l--~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~ 949 (1198)
+-.....++..+.. +..+ ..+...+.++|=|||...+.-.. .++ ....-..
T Consensus 200 i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~--~~~----------~~~~~~~ 267 (732)
T KOG1050|consen 200 LGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLL--ELP----------YVGSKGM 267 (732)
T ss_pred cccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccc--cch----------hHHHHHH
Confidence 76666666555432 0001 11222345566677765542110 000 0011122
Q ss_pred HHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC------CcEEEEEecC---CChh---hHHHHHHHHH---
Q 046057 950 ALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR------GGQVVLLGSA---PDPR---IQNDFVNLAN--- 1014 (1198)
Q Consensus 950 aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~------~~qLVIvGsg---pdp~---i~~~L~~la~--- 1014 (1198)
.++..+ .++.+|+.+-|++.-||+..=+.|+.+++.. .+.++.+..+ +... ++..+..++.
T Consensus 268 ei~~~~----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn 343 (732)
T KOG1050|consen 268 EIKEPF----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRIN 343 (732)
T ss_pred HHhhhc----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhh
Confidence 333333 3667999999999999999888999888853 2333333322 2221 2222223333
Q ss_pred -HhCCCCCCcEEEE-ccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhC----CcEEEeCCccccccccccccchh
Q 046057 1015 -ELHSSHADRARLC-LTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYG----SIPVVRKTGGLYDTVFDVDHDKE 1088 (1198)
Q Consensus 1015 -eLgl~~~drV~f~-g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G----~PvIvt~tGGl~E~V~d~d~~~~ 1088 (1198)
+++-.....|+++ -.++..++-.+++-+|++++.|.-++..|+.+|...|. .+.|.+..-|..++..++
T Consensus 344 ~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~----- 418 (732)
T KOG1050|consen 344 EKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDA----- 418 (732)
T ss_pred hccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeecccccccccc-----
Confidence 2232111234443 45788888999999999999999999999999998874 566767666666666554
Q ss_pred hhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1089 RAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1089 ~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
..++.+.|...++.+|.
T Consensus 419 ----------aivvnpw~~~~~~~~i~ 435 (732)
T KOG1050|consen 419 ----------AIVVNPWDGDEFAILIS 435 (732)
T ss_pred ----------CEEECCcchHHHHHHHH
Confidence 66778999999998877
No 144
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=96.39 E-value=0.065 Score=63.08 Aligned_cols=126 Identities=14% Similarity=0.039 Sum_probs=71.2
Q ss_pred CcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEE-EecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH
Q 046057 962 LPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVL-LGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA 1040 (1198)
Q Consensus 962 ~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVI-vGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA 1040 (1198)
.++++..|.+..... ..+..++..+.+.+.++++ +|.+.+. ..+. ..++++.+.+.++. ..+++
T Consensus 226 ~~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~g~~~~~---~~~~--------~~~~~v~~~~~~p~---~~ll~ 290 (392)
T TIGR01426 226 PVVLISLGTVFNNQP-SFYRTCVEAFRDLDWHVVLSVGRGVDP---ADLG--------ELPPNVEVRQWVPQ---LEILK 290 (392)
T ss_pred CEEEEecCccCCCCH-HHHHHHHHHHhcCCCeEEEEECCCCCh---hHhc--------cCCCCeEEeCCCCH---HHHHh
Confidence 345667787643222 2333344444445767665 5554221 1111 12578888877765 36789
Q ss_pred HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcC--CCHHHHHHHHh
Q 046057 1041 GADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDG--ADIAGVDYALN 1115 (1198)
Q Consensus 1041 ~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~--~D~~~La~AL~ 1115 (1198)
.||++|..+- ..|++|||++|+|.|+....+-...... +... ...|..+.. .+++.|.++|.
T Consensus 291 ~~~~~I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~------~l~~---~g~g~~l~~~~~~~~~l~~ai~ 354 (392)
T TIGR01426 291 KADAFITHGG----MNSTMEALFNGVPMVAVPQGADQPMTAR------RIAE---LGLGRHLPPEEVTAEKLREAVL 354 (392)
T ss_pred hCCEEEECCC----chHHHHHHHhCCCEEecCCcccHHHHHH------HHHH---CCCEEEeccccCCHHHHHHHHH
Confidence 9999997652 2478999999999999655432111110 1111 145666653 34677775555
No 145
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.34 E-value=0.52 Score=54.31 Aligned_cols=285 Identities=15% Similarity=0.142 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCCCCccccccccCCC
Q 046057 729 GDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGCVYGCN 808 (1198)
Q Consensus 729 ~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~~~f~rg~iYg~~ 808 (1198)
..+...|...|+++||+|.+.+.+++... ++ ...-|+++..+.... ...+
T Consensus 13 vhfFk~lI~elekkG~ev~iT~rd~~~v~-----~L-----------------Ld~ygf~~~~Igk~g----~~tl---- 62 (346)
T COG1817 13 VHFFKNLIWELEKKGHEVLITCRDFGVVT-----EL-----------------LDLYGFPYKSIGKHG----GVTL---- 62 (346)
T ss_pred hhHHHHHHHHHHhCCeEEEEEEeecCcHH-----HH-----------------HHHhCCCeEeecccC----CccH----
Confidence 56888999999999999999997765422 11 011233333332110 0000
Q ss_pred CchhhHHHHHHH---HHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhhHHHHHHhccC
Q 046057 809 NDKERFAFFCHA---ALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTYAD 885 (1198)
Q Consensus 809 dd~~Rf~~F~~a---ale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~li~~~~~~AD 885 (1198)
.+.+...... +.+++ .+++|||...- ++..++...... ++|.|+...+--.. .--+..+..|+
T Consensus 63 --~~Kl~~~~eR~~~L~ki~--~~~kpdv~i~~--~s~~l~rvafgL-------g~psIi~~D~ehA~-~qnkl~~Pla~ 128 (346)
T COG1817 63 --KEKLLESAERVYKLSKII--AEFKPDVAIGK--HSPELPRVAFGL-------GIPSIIFVDNEHAE-AQNKLTLPLAD 128 (346)
T ss_pred --HHHHHHHHHHHHHHHHHH--hhcCCceEeec--CCcchhhHHhhc-------CCceEEecCChhHH-HHhhcchhhhh
Confidence 0111111111 11222 24799998761 233344433322 77877776553211 11223445699
Q ss_pred EEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCC----CCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCC
Q 046057 886 KATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQ----DMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSD 961 (1198)
Q Consensus 886 ~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~----d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d 961 (1198)
.+++.+.....++...+. .+.+ ..-+||+-. ..|.|. ....+++|+...+
T Consensus 129 ~ii~P~~~~~~~~~~~G~---~p~~-i~~~~giae~~~v~~f~pd----------------------~evlkeLgl~~~~ 182 (346)
T COG1817 129 VIITPEAIDEEELLDFGA---DPNK-ISGYNGIAELANVYGFVPD----------------------PEVLKELGLEEGE 182 (346)
T ss_pred heecccccchHHHHHhCC---Cccc-eecccceeEEeecccCCCC----------------------HHHHHHcCCCCCC
Confidence 999988888877764332 1122 223455532 113331 2456889998533
Q ss_pred CcEEEEE-----ecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 962 LPLVGII-----TRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 962 ~plIg~V-----GRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
..+|+=. .-...+++++.+.+++..+.+.+ .|++-. + +..++..+.+. ++.. ..-..+.+.
T Consensus 183 ~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr--~----~~~~eife~~~-----n~i~-pk~~vD~l~ 248 (346)
T COG1817 183 TYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPR--E----KEQAEIFEGYR-----NIII-PKKAVDTLS 248 (346)
T ss_pred ceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecC--c----hhHHHHHhhhc-----cccC-CcccccHHH
Confidence 4333322 12345677777888888887666 344433 1 22223333221 1111 111111122
Q ss_pred HHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHH-HHHHHHh
Q 046057 1037 LIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIA-GVDYALN 1115 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~-~La~AL~ 1115 (1198)
++=-|++++- +-|.-.-||+..|+|.|...-|- .=.|... +.+.|.++...|+. .+..++.
T Consensus 249 -Llyya~lvig-----~ggTMarEaAlLGtpaIs~~pGk-ll~vdk~-----------lie~G~~~~s~~~~~~~~~a~~ 310 (346)
T COG1817 249 -LLYYATLVIG-----AGGTMAREAALLGTPAISCYPGK-LLAVDKY-----------LIEKGLLYHSTDEIAIVEYAVR 310 (346)
T ss_pred -HHhhhheeec-----CCchHHHHHHHhCCceEEecCCc-cccccHH-----------HHhcCceeecCCHHHHHHHHHH
Confidence 2333566552 23556689999999999987442 1111111 12569999877775 4555544
No 146
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.24 E-value=0.28 Score=57.64 Aligned_cols=318 Identities=11% Similarity=0.053 Sum_probs=171.7
Q ss_pred CCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCCCCccccccc
Q 046057 725 VGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGCV 804 (1198)
Q Consensus 725 vGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~~~f~rg~i 804 (1198)
.+|...+...|.++|...||+|..+=+.+..... ...++.. .+....+..++.
T Consensus 13 ~~~~~~~~~~~~~~l~~~g~kvlflE~~~~~~~k-----------------~rd~~~~--~~~~~~~~~~~~-------- 65 (373)
T COG4641 13 NNGSAEYYRGLLRALKMDGMKVLFLESGDFWDYK-----------------NRDIDAE--DGCTEAFYKDQP-------- 65 (373)
T ss_pred cCCchhhHHHHHHHHHhccceEEEEecccHHhhh-----------------cccccCc--cchhheeecCcH--------
Confidence 4688999999999999999999998765221110 0000000 233333333221
Q ss_pred cCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCC-------hhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhh--
Q 046057 805 YGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWS-------SAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTH-- 875 (1198)
Q Consensus 805 Yg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~-------ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~-- 875 (1198)
+ +...+....++||+|.+-.+. +..+-..++. ..+|+++..-...+...
T Consensus 66 --------------e-~~~~~~i~~fk~d~iv~~~~~~~~~~~~~~~~~a~l~~-------~~l~~~~w~te~p~~~~~~ 123 (373)
T COG4641 66 --------------E-LESLLYIREFKPDIIVNMSGDDQPDEESTIDLWAWLKR-------KCLPVIVWYTEDPYDTDIF 123 (373)
T ss_pred --------------H-HHHHHHHHhcCCcEEEEecccccccceehHHHHHHhhc-------CCcceEEEEeccchhhhhh
Confidence 1 111222223799998875332 2222211221 25686666655444311
Q ss_pred ------HH-HHHHhccCEEEEeCHHH-HHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCC-CCCCCcccccchhhhchHH
Q 046057 876 ------HI-GKAMTYADKATTVSHTY-SKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFN-DKFIPVSYTSENLVEGKRA 946 (1198)
Q Consensus 876 ------li-~~~~~~AD~VitVS~~~-a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~-D~~Lp~~ys~~~~~~gk~~ 946 (1198)
.+ +..+..-|.|++.++.. +..+... .-..+.+.+++++|.+.|.|.. |. .|
T Consensus 124 ~~~~~~~~~~~~l~~fd~v~~~g~~l~~~~yyq~----~~~~~~~~~~~a~d~~~~~~i~~da----~~----------- 184 (373)
T COG4641 124 SQVAEEQLARRPLFIFDNVLSFGGGLVANKYYQE----GGARNCYYLPWAVDDSLFHPIPPDA----SY----------- 184 (373)
T ss_pred hhhhHHHhhccccchhhhhhhccchHHHHHHHHh----hcccceeccCccCCchhcccCCccc----cc-----------
Confidence 11 11222345566777766 3333211 1124678899999999888742 11 00
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC---CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCc
Q 046057 947 AKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR---GGQVVLLGSAPDPRIQNDFVNLANELHSSHADR 1023 (1198)
Q Consensus 947 ~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~---~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~dr 1023 (1198)
.-=+.++|.--+. .++.+.+.+.....+ +-+++..|..- -..+....- .++
T Consensus 185 ---------------~~dL~~ign~~pD-r~e~~ke~~~~ps~kl~v~rr~~~~g~~y----~~~~~~~~~------~~~ 238 (373)
T COG4641 185 ---------------DVDLNLIGNPYPD-RVEEIKEFFVEPSFKLMVDRRFYVLGPRY----PDDIWGRTW------EPN 238 (373)
T ss_pred ---------------eeeeEEecCCCcc-HHHHHHHHhhccchhhhccceeeecCCcc----chhhhcccc------cch
Confidence 0126667765544 444454444332211 35667777641 111111110 123
Q ss_pred EEEEccCCh-HHHHHHHHHccEEEEcCCC---CC---CcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCC
Q 046057 1024 ARLCLTYDE-PLSHLIYAGADFILVPSIF---EP---CGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLE 1096 (1198)
Q Consensus 1024 V~f~g~~d~-~~l~~iyA~ADi~LvPS~~---Ep---fGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~ 1096 (1198)
+.-.|.+.. ..++..++--|+.+.=++. ++ +..-+.|+|+||.+.|+.-.-++.-.+.++
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pg------------- 305 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPG------------- 305 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCc-------------
Confidence 444455444 5566777777776664442 22 257789999999999998888888888776
Q ss_pred CcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH-
Q 046057 1097 PNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV- 1175 (1198)
Q Consensus 1097 ~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a- 1175 (1198)
.. .+-..|..++...+. .|...++.++++..++
T Consensus 306 k~--~iv~~d~kdl~~~~~--------------------------------------------yll~h~~erkeiae~~y 339 (373)
T COG4641 306 KD--IIVYQDSKDLKEKLK--------------------------------------------YLLNHPDERKEIAECAY 339 (373)
T ss_pred hh--eEEecCHHHHHHHHH--------------------------------------------HHhcCcchHHHHHHhhH
Confidence 12 333457788884444 4555565566676666
Q ss_pred --HHhcCChHHHHHHHHHHHHH
Q 046057 1176 --MEQDWSWNRPALDYMELYRA 1195 (1198)
Q Consensus 1176 --m~qdfSW~~~A~~yielY~~ 1195 (1198)
+..+++-+.-+..+++....
T Consensus 340 e~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 340 ERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred HHHHHhccHHHHHHHHHHHHHH
Confidence 33457777666666665543
No 147
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=95.63 E-value=2.3 Score=48.16 Aligned_cols=199 Identities=15% Similarity=0.166 Sum_probs=116.0
Q ss_pred CCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCC
Q 046057 830 FHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLH 909 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~ 909 (1198)
..||+|+.-...++++.+.+++.+ +.+.++.|.+..... ..-|.|+..-+...++.... ..+.-
T Consensus 69 ~~Pdl~I~aGrrta~l~~~lkk~~------~~~~vVqI~~Prlp~-------~~fDlvivp~HD~~~~~s~~---~~Nil 132 (329)
T COG3660 69 QRPDLIITAGRRTAPLAFYLKKKF------GGIKVVQIQDPRLPY-------NHFDLVIVPYHDWREELSDQ---GPNIL 132 (329)
T ss_pred CCCceEEecccchhHHHHHHHHhc------CCceEEEeeCCCCCc-------ccceEEeccchhhhhhhhcc---CCcee
Confidence 369999998899999999999887 335556665544332 23688888877777765321 11111
Q ss_pred cEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCH-----HHHHHHH
Q 046057 910 KFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGI-----HLIKHAI 984 (1198)
Q Consensus 910 K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGi-----dlIleAl 984 (1198)
.+.+.+|-|.. . ..++-..+.++++ +-+...+-++||--+++-.+ +.++.++
T Consensus 133 pi~Gs~h~Vt~--------~--------------~lAa~~e~~~~~~-p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l 189 (329)
T COG3660 133 PINGSPHNVTS--------Q--------------RLAALREAFKHLL-PLPRQRVAVLVGGNNKAFVFQEDKAHQFASLL 189 (329)
T ss_pred eccCCCCcccH--------H--------------HhhhhHHHHHhhC-CCCCceEEEEecCCCCCCccCHHHHHHHHHHH
Confidence 22222222221 1 1122233445554 43356677788876654443 4566666
Q ss_pred HHhhc-CCcEEEEEecCCChhhHHHHHHHHHH-hCCCCCCcEEEEccC--ChHHHHHHHHHccEEEEcCCCCCCcHHHHH
Q 046057 985 WRTLD-RGGQVVLLGSAPDPRIQNDFVNLANE-LHSSHADRARLCLTY--DEPLSHLIYAGADFILVPSIFEPCGLTQLV 1060 (1198)
Q Consensus 985 ~~ll~-~~~qLVIvGsgpdp~i~~~L~~la~e-Lgl~~~drV~f~g~~--d~~~l~~iyA~ADi~LvPS~~EpfGLt~LE 1060 (1198)
-+.++ .++.|++-=+-..| +..+.+... +.. .-..++..- +.+-...+++.||.++.+.-. =.-+.|
T Consensus 190 ~k~l~~~g~~~lisfSRRTp---~~~~s~l~~~l~s---~~~i~w~~~d~g~NPY~~~La~Adyii~TaDS---inM~sE 260 (329)
T COG3660 190 VKILENQGGSFLISFSRRTP---DTVKSILKNNLNS---SPGIVWNNEDTGYNPYIDMLAAADYIISTADS---INMCSE 260 (329)
T ss_pred HHHHHhCCceEEEEeecCCc---HHHHHHHHhcccc---CceeEeCCCCCCCCchHHHHhhcceEEEecch---hhhhHH
Confidence 66555 68899887765333 233333332 332 224444433 233357899999999987431 123579
Q ss_pred HHHhCCcEEEeCCccc
Q 046057 1061 AMRYGSIPVVRKTGGL 1076 (1198)
Q Consensus 1061 AMa~G~PvIvt~tGGl 1076 (1198)
|.+.|+||-+-...+.
T Consensus 261 AasTgkPv~~~~~~~~ 276 (329)
T COG3660 261 AASTGKPVFILEPPNF 276 (329)
T ss_pred HhccCCCeEEEecCCc
Confidence 9999999988655444
No 148
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=95.56 E-value=0.097 Score=55.76 Aligned_cols=89 Identities=26% Similarity=0.382 Sum_probs=56.1
Q ss_pred HHHHHhcCCCceEEEECC-CChhHHHHHHHHhhhhcCCCCCeEEEEecCC------c--hh---------------hh-H
Q 046057 822 LEFLLQGGFHPDIIHCHD-WSSAPVAWLFKDHYVHYGLSKARIVFTIHNL------E--FG---------------TH-H 876 (1198)
Q Consensus 822 le~L~~~~~~PDVIH~Hd-w~ta~va~llk~~y~~~gl~~ipvV~tIHn~------~--~~---------------~~-l 876 (1198)
+.-|+..|+.||||.+|. |.. +.++++.+ +++|+|..+--. . |. +| .
T Consensus 57 ~~~L~~~Gf~PDvI~~H~GWGe---~Lflkdv~-----P~a~li~Y~E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~ 128 (171)
T PF12000_consen 57 ARQLRAQGFVPDVIIAHPGWGE---TLFLKDVF-----PDAPLIGYFEFYYRASGADVGFDPEFPPSLDDRARLRMRNAH 128 (171)
T ss_pred HHHHHHcCCCCCEEEEcCCcch---hhhHHHhC-----CCCcEEEEEEEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHH
Confidence 333445589999999994 654 44566665 377776554321 1 00 11 1
Q ss_pred HHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCC
Q 046057 877 IGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMW 923 (1198)
Q Consensus 877 i~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~ 923 (1198)
+-..+..||..++.+..-+..+- . .-..|+.+|+-|||++.+
T Consensus 129 ~l~~l~~~D~~isPT~wQ~~~fP---~--~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 129 NLLALEQADAGISPTRWQRSQFP---A--EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHHhCCcCcCCCHHHHHhCC---H--HHHcCcEEeecccchhhc
Confidence 22456779988888877666552 1 224699999999998754
No 149
>PLN02784 alpha-amylase
Probab=95.47 E-value=0.034 Score=71.07 Aligned_cols=70 Identities=14% Similarity=0.084 Sum_probs=47.0
Q ss_pred CCceEEEEEeC-----CCCCCcccee-------------eeccccCCCCCeEEEEEEecCCceEEEEEEecCCCCCCccc
Q 046057 467 AKELWIHGGYN-----NWKDGLSIVA-------------RLVSSERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAIVY 528 (1198)
Q Consensus 467 a~~I~lh~G~N-----~W~~~~~~~~-------------~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~~~~~~~~w 528 (1198)
...|.||||-. .|.-+.+... .+.....+.| -|.. +.+-..-..|.||.++.. ++|
T Consensus 306 ~~~vvlHWgV~k~~~~eW~~Pp~~~~P~~sv~~~kA~eT~~~~~~~~~~-~~~~-~~ld~~~~g~~FVLk~~~----g~W 379 (894)
T PLN02784 306 PGDVVVHWGVCKDGAKTWEIPPEPHPPETSLFKNKALQTMLQQKDDGNG-SSGL-FSLDGELEGLLFVLKLNE----GTW 379 (894)
T ss_pred CCCEEEEeEeccCCCCcccCCCCCCCCCcceecccccccccccccCCCc-ceEE-EecCCCeeEEEEEEECCC----Cch
Confidence 56899999983 7875543111 1222222333 3553 666555567999999853 799
Q ss_pred cCCCCcceEEEecC
Q 046057 529 DNNSRQDFHAIVPK 542 (1198)
Q Consensus 529 DNN~g~dyh~~V~~ 542 (1198)
=||+|.||-++...
T Consensus 380 ~~~~G~DF~Ipl~~ 393 (894)
T PLN02784 380 LRCNGNDFYVPLLT 393 (894)
T ss_pred hhcCCccEEEeCCc
Confidence 99999999999975
No 150
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.01 E-value=1.8 Score=50.43 Aligned_cols=197 Identities=16% Similarity=0.112 Sum_probs=113.9
Q ss_pred CCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCC
Q 046057 830 FHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLH 909 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~ 909 (1198)
..||+|++-...++++..+++..+. .++++|+..+ ... .....|.+++..+. .+. -+.+.-
T Consensus 56 ~~pdLiIsaGr~t~~~~~~l~r~~g----g~~~~V~i~~-P~~-------~~~~FDlvi~p~HD---~~~----~~~Nvl 116 (311)
T PF06258_consen 56 PWPDLIISAGRRTAPAALALRRASG----GRTKTVQIMD-PRL-------PPRPFDLVIVPEHD---RLP----RGPNVL 116 (311)
T ss_pred CCCcEEEECCCchHHHHHHHHHHcC----CCceEEEEcC-CCC-------CccccCEEEECccc---CcC----CCCceE
Confidence 3699999999999988888887651 1235544443 221 13467888887655 110 011111
Q ss_pred cEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCcc--CHH---HHHHHH
Q 046057 910 KFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQK--GIH---LIKHAI 984 (1198)
Q Consensus 910 K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qK--Gid---lIleAl 984 (1198)
...+.+|.|++ +.-..++.++..+++-. +...+.+.||-=+..- +-+ .+++.+
T Consensus 117 ~t~ga~~~i~~---------------------~~l~~a~~~~~~~~~~l-~~p~~avLIGG~s~~~~~~~~~~~~l~~~l 174 (311)
T PF06258_consen 117 PTLGAPNRITP---------------------ERLAEAAAAWAPRLAAL-PRPRVAVLIGGDSKHYRWDEEDAERLLDQL 174 (311)
T ss_pred ecccCCCcCCH---------------------HHHHHHHHhhhhhhccC-CCCeEEEEECcCCCCcccCHHHHHHHHHHH
Confidence 12223444432 12233455566666532 2344555666533222 233 556666
Q ss_pred HHhhc-CCcEEEEEecCCCh-hhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHH
Q 046057 985 WRTLD-RGGQVVLLGSAPDP-RIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAM 1062 (1198)
Q Consensus 985 ~~ll~-~~~qLVIvGsgpdp-~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAM 1062 (1198)
..+.+ .++.+.|..|-.-+ .....|.++.+ - ...+.++..-.++-+..+|+.||.++++.- .-. -+-||+
T Consensus 175 ~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~---~--~~~~~~~~~~~~nPy~~~La~ad~i~VT~D--SvS-MvsEA~ 246 (311)
T PF06258_consen 175 AALAAAYGGSLLVTTSRRTPPEAEAALRELLK---D--NPGVYIWDGTGENPYLGFLAAADAIVVTED--SVS-MVSEAA 246 (311)
T ss_pred HHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhc---C--CCceEEecCCCCCcHHHHHHhCCEEEEcCc--cHH-HHHHHH
Confidence 66654 46799998885332 23334444432 1 356766655555557899999999999843 222 257999
Q ss_pred HhCCcEEEeCCcc
Q 046057 1063 RYGSIPVVRKTGG 1075 (1198)
Q Consensus 1063 a~G~PvIvt~tGG 1075 (1198)
+.|+||.+-...+
T Consensus 247 ~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 247 ATGKPVYVLPLPG 259 (311)
T ss_pred HcCCCEEEecCCC
Confidence 9999999987765
No 151
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=94.71 E-value=1.1 Score=52.77 Aligned_cols=179 Identities=15% Similarity=0.148 Sum_probs=98.8
Q ss_pred CCceEEEECCCChhH--HHHHHHHhhhhcCCCCCeEEEEecCCch--hhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCC
Q 046057 830 FHPDIIHCHDWSSAP--VAWLFKDHYVHYGLSKARIVFTIHNLEF--GTHHIGKAMTYADKATTVSHTYSKEVAGDPAIA 905 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~--va~llk~~y~~~gl~~ipvV~tIHn~~~--~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~ 905 (1198)
.+||++.+-|....- ++..++.. ..++|+|+.+-=--+ ...-++...+++|.+.+.=|.-.+.+ +
T Consensus 75 ~~pd~~i~iD~p~Fnl~lak~~k~~-----~~~i~viyyi~PqvWAWr~~R~~~i~k~~d~vl~ifPFE~~~y-g----- 143 (347)
T PRK14089 75 KQADKVLLMDSSSFNIPLAKKIKKA-----YPKKEIIYYILPQVWAWKKGRAKILEKYCDFLASILPFEVQFY-Q----- 143 (347)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhc-----CCCCCEEEEECccceeeCcchHHHHHHHHhhhhccCCCCHHHh-C-----
Confidence 689999998755422 33333322 136898887764433 23455666677888877654322222 1
Q ss_pred CCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCC-C-ccCHHHHHHH
Q 046057 906 PHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLT-H-QKGIHLIKHA 983 (1198)
Q Consensus 906 ~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~-~-qKGidlIleA 983 (1198)
. ...+.+- |..|. + . . .+.. ++ ++..+.++-|.-. . .+-+..+++|
T Consensus 144 ~-~~~~VGh----------Pl~d~----------~-~---~----~~~~--~~-~~~~I~llPGSR~~Ei~~llP~~~~a 191 (347)
T PRK14089 144 S-KATYVGH----------PLLDE----------I-K---E----FKKD--LD-KEGTIAFMPGSRKSEIKRLMPIFKEL 191 (347)
T ss_pred C-CCEEECC----------cHHHh----------h-h---h----hhhh--cC-CCCEEEEECCCCHHHHHHHHHHHHHH
Confidence 1 1112221 11110 0 0 0 0011 22 2323344445432 2 2345666788
Q ss_pred HHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHH
Q 046057 984 IWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMR 1063 (1198)
Q Consensus 984 l~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa 1063 (1198)
+.++.++..++++.|.. + .+.+++...+. ..+.+.. ....+|+.||+.|..| |.+.||++.
T Consensus 192 a~~L~~~~~~~~i~~a~-~---~~~i~~~~~~~-----~~~~~~~-----~~~~~m~~aDlal~~S-----GT~TLE~al 252 (347)
T PRK14089 192 AKKLEGKEKILVVPSFF-K---GKDLKEIYGDI-----SEFEISY-----DTHKALLEAEFAFICS-----GTATLEAAL 252 (347)
T ss_pred HHHHhhcCcEEEEeCCC-c---HHHHHHHHhcC-----CCcEEec-----cHHHHHHhhhHHHhcC-----cHHHHHHHH
Confidence 88887655677777653 2 14455544321 2344442 2468899999999887 888899999
Q ss_pred hCCcEEE
Q 046057 1064 YGSIPVV 1070 (1198)
Q Consensus 1064 ~G~PvIv 1070 (1198)
+|+|.|+
T Consensus 253 ~g~P~Vv 259 (347)
T PRK14089 253 IGTPFVL 259 (347)
T ss_pred hCCCEEE
Confidence 9999998
No 152
>cd02859 AMPKbeta_GBD_like AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD). AMPK is a metabolic stress sensing protein that senses AMP/ATP and has recently been found to act as a glycogen sensor as well. The protein functions as a alpha-beta-gamma heterotrimer. This domain is the glycogen binding domain of the beta subunit.
Probab=94.70 E-value=0.13 Score=47.88 Aligned_cols=54 Identities=24% Similarity=0.561 Sum_probs=42.8
Q ss_pred EEEEEEeCCCCCCCCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecC
Q 046057 452 LVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADG 520 (1198)
Q Consensus 452 ~V~v~YN~~~g~L~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~ 520 (1198)
+|++.|+ + ++++|+|-|.||+|... ..|.+.. +| |.+++.+|...+..-|+. ||
T Consensus 3 ~v~f~~~---~---~a~~V~v~G~F~~W~~~----~pm~~~~--~~--~~~~~~L~~g~y~YkF~V-dg 56 (79)
T cd02859 3 PTTFVWP---G---GGKEVYVTGSFDNWKKK----IPLEKSG--KG--FSATLRLPPGKYQYKFIV-DG 56 (79)
T ss_pred EEEEEEc---C---CCcEEEEEEEcCCCCcc----ccceECC--CC--cEEEEEcCCCCEEEEEEE-CC
Confidence 6899998 3 68999999999999842 2444433 34 999999999999999987 65
No 153
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=94.57 E-value=0.6 Score=53.15 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=37.9
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|+|++|+...+|+ ..||++..+.+|.+.|.+.-+.|..|++.
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~ 42 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGAN 42 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCC
Confidence 8999999999998 59999999999999999887888877765
No 154
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.24 E-value=3.4 Score=47.34 Aligned_cols=90 Identities=16% Similarity=0.210 Sum_probs=58.2
Q ss_pred EEEEEecCCCccCHHHHHHHHHHhhcCCcEE-EEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHc
Q 046057 964 LVGIITRLTHQKGIHLIKHAIWRTLDRGGQV-VLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGA 1042 (1198)
Q Consensus 964 lIg~VGRL~~qKGidlIleAl~~ll~~~~qL-VIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~A 1042 (1198)
+++..|-- ..|+ +.++.+..+...++.+ +++|++ +|. ...++..+++. ++++++-. .+.+..++..|
T Consensus 161 ilI~lGGs-Dpk~--lt~kvl~~L~~~~~nl~iV~gs~-~p~-l~~l~k~~~~~-----~~i~~~~~--~~dma~LMke~ 228 (318)
T COG3980 161 ILITLGGS-DPKN--LTLKVLAELEQKNVNLHIVVGSS-NPT-LKNLRKRAEKY-----PNINLYID--TNDMAELMKEA 228 (318)
T ss_pred EEEEccCC-Chhh--hHHHHHHHhhccCeeEEEEecCC-Ccc-hhHHHHHHhhC-----CCeeeEec--chhHHHHHHhc
Confidence 55555543 3455 4456666665555444 557766 444 45566666532 46776543 34478999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHhCCcEEE
Q 046057 1043 DFILVPSIFEPCGLTQLVAMRYGSIPVV 1070 (1198)
Q Consensus 1043 Di~LvPS~~EpfGLt~LEAMa~G~PvIv 1070 (1198)
|+.+.. -|.++.||+..|+|.++
T Consensus 229 d~aI~A-----aGstlyEa~~lgvP~l~ 251 (318)
T COG3980 229 DLAISA-----AGSTLYEALLLGVPSLV 251 (318)
T ss_pred chheec-----cchHHHHHHHhcCCceE
Confidence 998864 48999999999999443
No 155
>cd02859 AMPKbeta_GBD_like AMP-activated protein kinase (AMPK) beta subunit glycogen binding domain (GBD). AMPK is a metabolic stress sensing protein that senses AMP/ATP and has recently been found to act as a glycogen sensor as well. The protein functions as a alpha-beta-gamma heterotrimer. This domain is the glycogen binding domain of the beta subunit.
Probab=94.07 E-value=0.18 Score=46.79 Aligned_cols=59 Identities=17% Similarity=0.493 Sum_probs=46.4
Q ss_pred eEEEEEcccCCCCCCCCcEEEEeecCCccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcCCcccccC
Q 046057 277 DIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQNIYENN 350 (1198)
Q Consensus 277 ~v~v~yN~~l~~L~~~~~v~ih~GfN~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg~~~wDNN 350 (1198)
+|++.|++ ++.+|.|.+-||+|.. ...|.+...+ |.+++.+|+..|..-|+. || .|-.+
T Consensus 3 ~v~f~~~~------~a~~V~v~G~F~~W~~---~~pm~~~~~~---~~~~~~L~~g~y~YkF~V-dg--~w~~d 61 (79)
T cd02859 3 PTTFVWPG------GGKEVYVTGSFDNWKK---KIPLEKSGKG---FSATLRLPPGKYQYKFIV-DG--EWRHS 61 (79)
T ss_pred EEEEEEcC------CCcEEEEEEEcCCCCc---cccceECCCC---cEEEEEcCCCCEEEEEEE-CC--EEEeC
Confidence 67888884 5689999999999954 2566666543 999999999999999998 76 35443
No 156
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=92.98 E-value=0.79 Score=52.96 Aligned_cols=113 Identities=22% Similarity=0.110 Sum_probs=73.0
Q ss_pred HHHHHHHhCCCCCCCcEEEEEec-CCCccCH--HHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcE
Q 046057 948 KEALQQKVGLRKSDLPLVGIITR-LTHQKGI--HLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRA 1024 (1198)
Q Consensus 948 k~aLrq~lGL~~~d~plIg~VGR-L~~qKGi--dlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV 1024 (1198)
++.+..+++++..+..+++..|. ..+.|.+ +...+.+..+.+.+.++|++|+..+ ++..+++...++ ...+
T Consensus 161 ~~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e---~~~~~~i~~~~~---~~~~ 234 (334)
T TIGR02195 161 QAAALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKD---HPAGNEIEALLP---GELR 234 (334)
T ss_pred HHHHHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhh---HHHHHHHHHhCC---cccc
Confidence 34456677776323344455554 3467764 4677777777666889999998533 233344444322 1224
Q ss_pred EEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1025 RLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1025 ~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
.+.+..+-.++..+++.||++|-.-- |. +=-|.+.|+|+|+=
T Consensus 235 ~l~g~~sL~el~ali~~a~l~I~~DS----Gp-~HlAaA~~~P~i~l 276 (334)
T TIGR02195 235 NLAGETSLDEAVDLIALAKAVVTNDS----GL-MHVAAALNRPLVAL 276 (334)
T ss_pred cCCCCCCHHHHHHHHHhCCEEEeeCC----HH-HHHHHHcCCCEEEE
Confidence 46777788889999999999997642 33 33578999999983
No 157
>PLN02784 alpha-amylase
Probab=91.98 E-value=1.7 Score=56.31 Aligned_cols=92 Identities=14% Similarity=0.155 Sum_probs=60.1
Q ss_pred cEEEecccCCCCCeEEEEEcccCCCCCCCCcEEEEeec-----CCccccc--------------cceecccccCCCCeEE
Q 046057 264 KIFVYPQVVKPDQDIEVFLNRSLSTLKNEPDVLIMGAF-----NDWRWKS--------------FTFRLNKTHLKGDWWS 324 (1198)
Q Consensus 264 ~v~v~P~~~~aG~~v~v~yN~~l~~L~~~~~v~ih~Gf-----N~W~~~~--------------~~~~~~~t~~~~dWw~ 324 (1198)
++.|.=..-..+....|+.-..+ ...+.||||- -.|.... ....+.+...+..=|.
T Consensus 283 ~~~v~v~~~~~~~k~~v~v~td~-----~~~vvlHWgV~k~~~~eW~~Pp~~~~P~~sv~~~kA~eT~~~~~~~~~~~~~ 357 (894)
T PLN02784 283 SVTVTVRKCPETAKNLVYLETDL-----PGDVVVHWGVCKDGAKTWEIPPEPHPPETSLFKNKALQTMLQQKDDGNGSSG 357 (894)
T ss_pred eEEEEEecCCCCCceEEEEEcCC-----CCCEEEEeEeccCCCCcccCCCCCCCCCcceecccccccccccccCCCcceE
Confidence 34433334445556666665333 3489999998 2687643 2233343333333344
Q ss_pred EEEEecCCceeEeEEEEcCCcccccCCCCceEEEEcC
Q 046057 325 CQVHVPKEAFKIDFVFFNGQNIYENNDQKDFCIAVEG 361 (1198)
Q Consensus 325 ~~v~VP~~A~~lnFvF~dg~~~wDNN~g~d~~~~V~~ 361 (1198)
.+.+-.....|.||+....++|=||+|.||+++...
T Consensus 358 -~~~ld~~~~g~~FVLk~~~g~W~~~~G~DF~Ipl~~ 393 (894)
T PLN02784 358 -LFSLDGELEGLLFVLKLNEGTWLRCNGNDFYVPLLT 393 (894)
T ss_pred -EEecCCCeeEEEEEEECCCCchhhcCCccEEEeCCc
Confidence 377766667799999997788999999999999883
No 158
>cd02861 E_set_proteins_like E or "early" set-like proteins. These alpha amylase-like sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies are associated with different types of catalytic domains at either the N-terminal or C-terminal end. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=90.64 E-value=0.9 Score=42.26 Aligned_cols=53 Identities=19% Similarity=0.459 Sum_probs=37.8
Q ss_pred EEEEEEeCCCCCCCCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEE
Q 046057 452 LVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVF 517 (1198)
Q Consensus 452 ~V~v~YN~~~g~L~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvF 517 (1198)
+|++.|- .| +|++|+|.|.||+|. ...|.+. + .++|++++.+|...+...|+.
T Consensus 3 ~vtf~~~---ap--~a~~V~v~G~fn~W~-----~~~m~~~--~-~G~w~~~~~l~~G~y~Ykf~v 55 (82)
T cd02861 3 PVVFAYR---GP--EADSVYLAGSFNNWN-----AIPMERE--G-DGLWVVTVELRPGRYEYKFVV 55 (82)
T ss_pred cEEEEEE---CC--CCCEEEEEeECCCCC-----cccCEEC--C-CCcEEEEEeCCCCcEEEEEEE
Confidence 4566665 22 569999999999997 1233332 2 247999999999887777775
No 159
>cd02861 E_set_proteins_like E or "early" set-like proteins. These alpha amylase-like sugar utilizing enzymes which may be related to the immunoglobulin and/or fibronectin type III superfamilies are associated with different types of catalytic domains at either the N-terminal or C-terminal end. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=90.50 E-value=0.64 Score=43.21 Aligned_cols=46 Identities=22% Similarity=0.639 Sum_probs=36.4
Q ss_pred CCCcEEEEeecCCccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcC
Q 046057 291 NEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNG 343 (1198)
Q Consensus 291 ~~~~v~ih~GfN~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg 343 (1198)
++..|.|.+.||+|. ...|.+. +.++|++++.+|+..|..-|+. ||
T Consensus 12 ~a~~V~v~G~fn~W~----~~~m~~~--~~G~w~~~~~l~~G~y~Ykf~v-dg 57 (82)
T cd02861 12 EADSVYLAGSFNNWN----AIPMERE--GDGLWVVTVELRPGRYEYKFVV-DG 57 (82)
T ss_pred CCCEEEEEeECCCCC----cccCEEC--CCCcEEEEEeCCCCcEEEEEEE-CC
Confidence 357899999999996 2455553 3568999999999999999987 55
No 160
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=88.68 E-value=13 Score=43.41 Aligned_cols=117 Identities=9% Similarity=0.006 Sum_probs=84.2
Q ss_pred cEEEEEec-CCCccCHHHHHHHHHHhhcCCcEEEE-EecC-CChhhHHHHHHHHHHhCCCCCCcEEEEccC-ChHHHHHH
Q 046057 963 PLVGIITR-LTHQKGIHLIKHAIWRTLDRGGQVVL-LGSA-PDPRIQNDFVNLANELHSSHADRARLCLTY-DEPLSHLI 1038 (1198)
Q Consensus 963 plIg~VGR-L~~qKGidlIleAl~~ll~~~~qLVI-vGsg-pdp~i~~~L~~la~eLgl~~~drV~f~g~~-d~~~l~~i 1038 (1198)
++.+.+|. -++.-++..+++++++....++++++ +|-+ .+..+.+..++.+.++-- ++++..+-.+ +-++.-.+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~--~~~~~~L~e~l~f~eYl~l 223 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFG--AENFQILTEKLPFDDYLAL 223 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcC--cccEEehhhhCCHHHHHHH
Confidence 45555665 46777888899999988888899888 4431 256677888888887653 3678776653 66667899
Q ss_pred HHHccEEEEcC-CCCCCcHHHHHHHHhCCcEEEe-CCccccccccc
Q 046057 1039 YAGADFILVPS-IFEPCGLTQLVAMRYGSIPVVR-KTGGLYDTVFD 1082 (1198)
Q Consensus 1039 yA~ADi~LvPS-~~EpfGLt~LEAMa~G~PvIvt-~tGGl~E~V~d 1082 (1198)
++.||+.++.- +.++.|..++ .+..|+||+.+ .+.-..++...
T Consensus 224 L~~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~ 268 (322)
T PRK02797 224 LRQCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQ 268 (322)
T ss_pred HHhCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhC
Confidence 99999988864 4578886544 68999999986 55444554443
No 161
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=88.17 E-value=41 Score=38.35 Aligned_cols=100 Identities=15% Similarity=0.068 Sum_probs=62.4
Q ss_pred CcEEEEEecCCC---ccCHHHHHHHHHHhhcC-CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHH
Q 046057 962 LPLVGIITRLTH---QKGIHLIKHAIWRTLDR-GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHL 1037 (1198)
Q Consensus 962 ~plIg~VGRL~~---qKGidlIleAl~~ll~~-~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~ 1037 (1198)
.+.|++.-|-.+ ...+..+.+++..+.++ +.+++++...+. .-....+.+...+.- +..+ +...+..++..
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~-~D~~~~~~l~~~~~~--~~~i--~~~~~~~e~~~ 246 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQP-QDLPLARALRDQLLG--PAEV--LSPLDPEELLG 246 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcc-hhHHHHHHHHHhcCC--CcEE--EecCCHHHHHH
Confidence 345555544321 22356777888887665 788777654211 112334455554432 2333 35557777788
Q ss_pred HHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1038 IYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1038 iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
+++.||++|-..++ ..+-|+.+|+|+|+-
T Consensus 247 ~i~~~~~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 247 LFASARLVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred HHhhCCEEEEechH-----HHHHHHHcCCCEEEe
Confidence 99999988877665 568899999999964
No 162
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=87.82 E-value=7.2 Score=45.67 Aligned_cols=103 Identities=14% Similarity=-0.031 Sum_probs=68.0
Q ss_pred CCcEEEEEecCCCccC--HHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHH
Q 046057 961 DLPLVGIITRLTHQKG--IHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLI 1038 (1198)
Q Consensus 961 d~plIg~VGRL~~qKG--idlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~i 1038 (1198)
+..+++..|.-.+.|. .+.+.+.+..+.+.+.++|++|+..+.+ ....+++++.+.. +..+.+.|..+-.++..+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e-~~~~~~i~~~~~~--~~~~~l~g~~sL~el~al 259 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDD-LACVNEIAQGCQT--PPVTALAGKTTFPELGAL 259 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHH-HHHHHHHHHhcCC--CccccccCCCCHHHHHHH
Confidence 4456667676667776 4467777777766788999998642211 2223444443221 233567787888889999
Q ss_pred HHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1039 YAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1039 yA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
++.||++|-..- |.. =-|.++|+|+|+=
T Consensus 260 i~~a~l~v~nDS----Gp~-HlAaA~g~P~v~l 287 (352)
T PRK10422 260 IDHAQLFIGVDS----APA-HIAAAVNTPLICL 287 (352)
T ss_pred HHhCCEEEecCC----HHH-HHHHHcCCCEEEE
Confidence 999999997642 333 3478999999984
No 163
>PLN02950 4-alpha-glucanotransferase
Probab=87.52 E-value=7 Score=51.77 Aligned_cols=83 Identities=12% Similarity=0.336 Sum_probs=52.2
Q ss_pred CCcEEEEEEeCCCCCCCCCCceEEEEEe---CCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEE--ecCCCC
Q 046057 449 GEDLVRLYYNKQSSSLAHAKELWIHGGY---NNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVF--ADGPPG 523 (1198)
Q Consensus 449 aG~~V~v~YN~~~g~L~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvF--sD~~~~ 523 (1198)
.++.|+|.++-+..-+.-.++|||-|.- ++|...... .|.. . .+.-|.++|.+|.....+.+-| .|..
T Consensus 149 ~~~~v~V~F~v~~~~~~~Gq~v~VvGs~~eLGnW~~~~a~--~Ls~--~-~~p~W~~~v~lp~~~~~~EYKyv~~~~~-- 221 (909)
T PLN02950 149 APDEIVVRFKIACPRLEEGTSVYVTGSIAQLGNWQVDDGL--KLNY--T-GDSIWEADCLVPKSDFPIKYKYALQTAE-- 221 (909)
T ss_pred CCCceeEEEEEecCccCCCCeEEEEechhhcCCCCccccc--cccc--C-CCCcEEEEEEecCCCceEEEEEEEEcCC--
Confidence 4677888888666656677899997766 699854422 2321 2 1334999999998754455444 4432
Q ss_pred CCccccCCCCcceEE
Q 046057 524 KAIVYDNNSRQDFHA 538 (1198)
Q Consensus 524 ~~~~wDNN~g~dyh~ 538 (1198)
+...|.+..++-+.+
T Consensus 222 g~v~WE~g~NR~~~~ 236 (909)
T PLN02950 222 GLVSLELGVNRELSL 236 (909)
T ss_pred CceEEeeCCCceeec
Confidence 346898655554443
No 164
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=87.36 E-value=4.3 Score=45.66 Aligned_cols=98 Identities=21% Similarity=0.153 Sum_probs=66.4
Q ss_pred EEEEEecCCCccC--HHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHH
Q 046057 964 LVGIITRLTHQKG--IHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAG 1041 (1198)
Q Consensus 964 lIg~VGRL~~qKG--idlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ 1041 (1198)
+++..|.-.+.|. .+.+.+.+..+.+++.++|++|+..+ ++..+++.+.++. +..+.+.+..+-.++..+++.
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e---~~~~~~i~~~~~~--~~~~~~~~~~~l~e~~~li~~ 198 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAE---RELAEEIAAALGG--PRVVNLAGKTSLRELAALLAR 198 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhh---HHHHHHHHHhcCC--CccccCcCCCCHHHHHHHHHh
Confidence 4555555555564 56778888887767899999997532 3444555554421 233556666677888999999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1042 ADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1042 ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
||++|.+.. |..-| |.+.|+|+|+=
T Consensus 199 ~~l~I~~Ds----g~~Hl-A~a~~~p~i~l 223 (279)
T cd03789 199 ADLVVTNDS----GPMHL-AAALGTPTVAL 223 (279)
T ss_pred CCEEEeeCC----HHHHH-HHHcCCCEEEE
Confidence 999997742 44444 56999999984
No 165
>PLN02448 UDP-glycosyltransferase family protein
Probab=87.09 E-value=18 Score=44.40 Aligned_cols=95 Identities=8% Similarity=-0.056 Sum_probs=55.3
Q ss_pred CCcEEEEEecCCC--ccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHH
Q 046057 961 DLPLVGIITRLTH--QKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLI 1038 (1198)
Q Consensus 961 d~plIg~VGRL~~--qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~i 1038 (1198)
...+++..|.... ..-+..+++++.. .+..||++..++ ...+.++. ++++.+..+.++ ..+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~---~~~~~lw~~~~~----~~~~~~~~-------~~~~~v~~w~pQ---~~i 336 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRD---SGVRFLWVARGE----ASRLKEIC-------GDMGLVVPWCDQ---LKV 336 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCc----hhhHhHhc-------cCCEEEeccCCH---HHH
Confidence 4456777777642 1123444444443 477888765532 11232221 246777777665 356
Q ss_pred HHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCc
Q 046057 1039 YAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTG 1074 (1198)
Q Consensus 1039 yA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tG 1074 (1198)
++..++..+=+. +--.+.+||+.+|+|.|+-...
T Consensus 337 L~h~~v~~fvtH--gG~nS~~eal~~GvP~l~~P~~ 370 (459)
T PLN02448 337 LCHSSVGGFWTH--CGWNSTLEAVFAGVPMLTFPLF 370 (459)
T ss_pred hccCccceEEec--CchhHHHHHHHcCCCEEecccc
Confidence 777777332222 2336899999999999996554
No 166
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=86.17 E-value=8.1 Score=45.11 Aligned_cols=115 Identities=18% Similarity=0.078 Sum_probs=70.2
Q ss_pred HHHHHHhCCCCCCCcEEEEEecC-CCccCH--HHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCc-E
Q 046057 949 EALQQKVGLRKSDLPLVGIITRL-THQKGI--HLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADR-A 1024 (1198)
Q Consensus 949 ~aLrq~lGL~~~d~plIg~VGRL-~~qKGi--dlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~dr-V 1024 (1198)
+.+.+.+++...+..+++..|.- .+.|.+ +.+.+.+..+.+.+.++|++|+..+ ++..++++..+......+ +
T Consensus 168 ~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e---~~~~~~i~~~~~~~~~~~~~ 244 (348)
T PRK10916 168 SETCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKD---HEAGNEILAALNTEQQAWCR 244 (348)
T ss_pred HHHHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHh---HHHHHHHHHhccccccccee
Confidence 33455566542233444555543 366763 4566666666666889999997533 233444444333110112 4
Q ss_pred EEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1025 RLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1025 ~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
.+.+..+=.++..+++.||++|-+-. |.. =-|.+.|+|+|+=
T Consensus 245 ~l~g~~sL~el~ali~~a~l~I~nDT----Gp~-HlAaA~g~P~val 286 (348)
T PRK10916 245 NLAGETQLEQAVILIAACKAIVTNDS----GLM-HVAAALNRPLVAL 286 (348)
T ss_pred eccCCCCHHHHHHHHHhCCEEEecCC----hHH-HHHHHhCCCEEEE
Confidence 56666777888999999999997642 333 3588999999983
No 167
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=85.66 E-value=9.8 Score=44.24 Aligned_cols=102 Identities=17% Similarity=-0.015 Sum_probs=66.1
Q ss_pred CcEEEEEecCCCccC--HHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 962 LPLVGIITRLTHQKG--IHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 962 ~plIg~VGRL~~qKG--idlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
..+++..|.-.+.|. .+...+.+..+.+++.++|++|+. ...-....+++...++. +.-+.+.|..+-.++..++
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p-~~~e~~~~~~i~~~~~~--~~~~~l~g~~sL~el~ali 258 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGP-DKDELAMVNEIAQGCQT--PRVTSLAGKLTLPQLAALI 258 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCC-CHHHHHHHHHHHhhCCC--CcccccCCCCCHHHHHHHH
Confidence 345555665556665 456666666666668899999863 32112233444443321 2235577778888899999
Q ss_pred HHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1040 AGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
+.||++|-+-- |. +=-|.+.|+|+|+=
T Consensus 259 ~~a~l~Vs~DS----Gp-~HlAaA~g~p~v~L 285 (344)
T TIGR02201 259 DHARLFIGVDS----VP-MHMAAALGTPLVAL 285 (344)
T ss_pred HhCCEEEecCC----HH-HHHHHHcCCCEEEE
Confidence 99999997642 33 34588999999984
No 168
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=85.49 E-value=48 Score=38.95 Aligned_cols=177 Identities=11% Similarity=0.122 Sum_probs=86.6
Q ss_pred CCCeEEEEecCCchhh------------hHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCC
Q 046057 859 SKARIVFTIHNLEFGT------------HHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPF 926 (1198)
Q Consensus 859 ~~ipvV~tIHn~~~~~------------~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~ 926 (1198)
.+.++|.+.|+...-. ..........|.+++.|+...+.+.. .++....++. ..|. |.
T Consensus 98 ~~~~~i~lwHG~~~K~~g~~~~~~~~~~~~~~~~~~~~d~~~~~s~~~~~~~~~--~f~~~~~~i~--~~G~------PR 167 (369)
T PF04464_consen 98 KNQKYIQLWHGIPLKKIGYDSPDNKNYRKNYKRNYRNYDYFIVSSEFEKEIFKK--AFGYPEDKIL--VTGY------PR 167 (369)
T ss_dssp TTSEEEE--SS--SB--GGG-S---TS-HHHHHHHTT-SEEEESSHHHHHHHHH--HTT--GGGEE--ES--------GG
T ss_pred CCcEEEEecCCCcccccchhccccccchhhhhhhccCCcEEEECCHHHHHHHHH--HhccCcceEE--EeCC------Ce
Confidence 3789999999984321 13344567789999999988887763 2333333443 3453 22
Q ss_pred CCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCH------H--HHHHHHHHhhcCCcEEEEEe
Q 046057 927 NDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGI------H--LIKHAIWRTLDRGGQVVLLG 998 (1198)
Q Consensus 927 ~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGi------d--lIleAl~~ll~~~~qLVIvG 998 (1198)
.|. +.......+..+++.++++ .++.+|++.-........ . +-.+.+..+...++.|++-.
T Consensus 168 ~D~----------l~~~~~~~~~~i~~~~~~~-~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~ 236 (369)
T PF04464_consen 168 NDY----------LFNKSKENRNRIKKKLGID-KDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKP 236 (369)
T ss_dssp GHH----------HHHSTT-HHHHHHHHTT---SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--
T ss_pred EhH----------HhccCHHHHHHHHHHhccC-CCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEe
Confidence 222 1222223367788899987 366688888544322111 1 12233434445677776654
Q ss_pred cCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 999 SAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 999 sgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
- |.....+... ....+++.++.... .+..++..||++|-= ++=+..|++.+++|+|--
T Consensus 237 H---p~~~~~~~~~-----~~~~~~i~~~~~~~--~~~~ll~~aDiLITD-----ySSi~fD~~~l~KPiify 294 (369)
T PF04464_consen 237 H---PNMKKKFKDF-----KEDNSNIIFVSDNE--DIYDLLAAADILITD-----YSSIIFDFLLLNKPIIFY 294 (369)
T ss_dssp S---HHHHTT---------TT-TTTEEE-TT-S---HHHHHHT-SEEEES-----S-THHHHHGGGT--EEEE
T ss_pred C---chhhhchhhh-----hccCCcEEECCCCC--CHHHHHHhcCEEEEe-----chhHHHHHHHhCCCEEEE
Confidence 3 3222222221 12246787765544 467999999999842 334789999999999953
No 169
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=85.39 E-value=2.4 Score=44.49 Aligned_cols=86 Identities=17% Similarity=0.195 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhcCCCceEEEECCCChhHH-HHHHHHhhhhcCCCCCeEEEEecCCch-hhhHHHHHHhccCEEEEeCHH
Q 046057 816 FFCHAALEFLLQGGFHPDIIHCHDWSSAPV-AWLFKDHYVHYGLSKARIVFTIHNLEF-GTHHIGKAMTYADKATTVSHT 893 (1198)
Q Consensus 816 ~F~~aale~L~~~~~~PDVIH~Hdw~ta~v-a~llk~~y~~~gl~~ipvV~tIHn~~~-~~~li~~~~~~AD~VitVS~~ 893 (1198)
++.+.+.++|.. .+||+|.|....++.+ ...++... ++.++|++..+-++.. ...++. ..+|..++.|+.
T Consensus 76 ~~~~~l~~~l~~--~~PD~IIsThp~~~~~~l~~lk~~~---~~~~~p~~tvvTD~~~~H~~W~~---~~~D~y~Vase~ 147 (169)
T PF06925_consen 76 LFARRLIRLLRE--FQPDLIISTHPFPAQVPLSRLKRRG---RLPNIPVVTVVTDFDTVHPFWIH---PGVDRYFVASEE 147 (169)
T ss_pred HHHHHHHHHHhh--cCCCEEEECCcchhhhHHHHHHHhh---cccCCcEEEEEcCCCCCCcCeec---CCCCEEEECCHH
Confidence 444566666665 5999999976554444 22233321 2336888766666532 333332 459999999999
Q ss_pred HHHHHhCCCCCCCCCCcEE
Q 046057 894 YSKEVAGDPAIAPHLHKFY 912 (1198)
Q Consensus 894 ~a~el~~~~~l~~~~~K~~ 912 (1198)
.++++...+ .+..++.
T Consensus 148 ~~~~l~~~G---i~~~~I~ 163 (169)
T PF06925_consen 148 VKEELIERG---IPPERIH 163 (169)
T ss_pred HHHHHHHcC---CChhHEE
Confidence 999998644 3344544
No 170
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=85.20 E-value=6.4 Score=43.23 Aligned_cols=102 Identities=19% Similarity=0.052 Sum_probs=60.9
Q ss_pred CCcEEEEEecCCCccCHH--HHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGIH--LIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLI 1038 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGid--lIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~i 1038 (1198)
+..++++.|.-.+.|.+. ...+.+..+.+.+.+++++|+.. ...++....+...+. ...+.+.+..+-.++..+
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~e~~al 180 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPE-EQEKEIADQIAAGLQ---NPVINLAGKTSLRELAAL 180 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSH-HHHHHHHHHHHTTHT---TTTEEETTTS-HHHHHHH
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccch-HHHHHHHHHHHHhcc---cceEeecCCCCHHHHHHH
Confidence 445666667666788744 48888888877788999999852 111222333333221 125778788888889999
Q ss_pred HHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1039 YAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1039 yA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
++.||++|.+-- |. +=-|.+.|+|+|+=
T Consensus 181 i~~a~~~I~~Dt----g~-~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 181 ISRADLVIGNDT----GP-MHLAAALGTPTVAL 208 (247)
T ss_dssp HHTSSEEEEESS----HH-HHHHHHTT--EEEE
T ss_pred HhcCCEEEecCC----hH-HHHHHHHhCCEEEE
Confidence 999999997742 33 34589999999984
No 171
>PLN02210 UDP-glucosyl transferase
Probab=85.08 E-value=18 Score=44.33 Aligned_cols=134 Identities=9% Similarity=0.050 Sum_probs=68.7
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEE-ecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLL-GSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIv-Gsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
...+++..|.+... ..+.+.+.+.-+...+.+|+++ +..........|.+... +++..+.++.++ ..++
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~------~~~g~v~~w~PQ---~~iL 338 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK------EGQGVVLEWSPQ---EKIL 338 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc------CCCeEEEecCCH---HHHh
Confidence 45677778887532 3334434443343457777763 32111111122332221 134445566665 3577
Q ss_pred HHccEEEEcCCCCCCc-HHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcC------CCHHHHHH
Q 046057 1040 AGADFILVPSIFEPCG-LTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDG------ADIAGVDY 1112 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfG-Lt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~------~D~~~La~ 1112 (1198)
+.+++..+=+. || .+.+||+.+|+|.|+-... .|...+. ....+.-..|..+.. -+.+++.+
T Consensus 339 ~h~~vg~FitH---~G~nS~~Eai~~GVP~v~~P~~--~DQ~~na------~~~~~~~g~G~~l~~~~~~~~~~~~~l~~ 407 (456)
T PLN02210 339 SHMAISCFVTH---CGWNSTIETVVAGVPVVAYPSW--TDQPIDA------RLLVDVFGIGVRMRNDAVDGELKVEEVER 407 (456)
T ss_pred cCcCcCeEEee---CCcccHHHHHHcCCCEEecccc--cccHHHH------HHHHHHhCeEEEEeccccCCcCCHHHHHH
Confidence 88874333332 44 5889999999999996543 2222211 000000145666632 36678887
Q ss_pred HHh
Q 046057 1113 ALN 1115 (1198)
Q Consensus 1113 AL~ 1115 (1198)
++.
T Consensus 408 av~ 410 (456)
T PLN02210 408 CIE 410 (456)
T ss_pred HHH
Confidence 777
No 172
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=84.53 E-value=33 Score=42.39 Aligned_cols=42 Identities=12% Similarity=0.184 Sum_probs=32.5
Q ss_pred CCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCC
Q 046057 706 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKY 753 (1198)
Q Consensus 706 ~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y 753 (1198)
.+.++||++|.. | .-|--.=..+|++.|+.+|+.|++++..+
T Consensus 6 ~~~~~HVvl~Pf---p---aqGHi~P~l~LAk~La~~G~~VTfv~T~~ 47 (477)
T PLN02863 6 KPAGTHVLVFPF---P---AQGHMIPLLDLTHRLALRGLTITVLVTPK 47 (477)
T ss_pred cCCCCEEEEecC---c---ccchHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 456789998842 2 34556677899999999999999998664
No 173
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=83.87 E-value=2.7 Score=40.39 Aligned_cols=81 Identities=11% Similarity=0.135 Sum_probs=58.1
Q ss_pred EEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEE---ccCChHH--HHHHHHHccEEEEcCCC---CCCcHHHHHHHHhC
Q 046057 994 VVLLGSAPDPRIQNDFVNLANELHSSHADRARLC---LTYDEPL--SHLIYAGADFILVPSIF---EPCGLTQLVAMRYG 1065 (1198)
Q Consensus 994 LVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~---g~~d~~~--l~~iyA~ADi~LvPS~~---EpfGLt~LEAMa~G 1065 (1198)
++|+|+- ......+.++++++|. .+.++ ++..... +...+..||++|++.-+ ..+-.+--+|-.+|
T Consensus 2 vliVGG~--~~~~~~~~~~~~~~G~----~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ 75 (97)
T PF10087_consen 2 VLIVGGR--EDRERRYKRILEKYGG----KLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYG 75 (97)
T ss_pred EEEEcCC--cccHHHHHHHHHHcCC----EEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcC
Confidence 5778872 2256788888888775 35565 5555544 78888999999998764 33445667889999
Q ss_pred CcEEEeCCccccccc
Q 046057 1066 SIPVVRKTGGLYDTV 1080 (1198)
Q Consensus 1066 ~PvIvt~tGGl~E~V 1080 (1198)
+|++-++..|+..+.
T Consensus 76 ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 76 IPIIYSRSRGVSSLE 90 (97)
T ss_pred CcEEEECCCCHHHHH
Confidence 999998877766554
No 174
>PLN02950 4-alpha-glucanotransferase
Probab=83.70 E-value=48 Score=44.26 Aligned_cols=271 Identities=14% Similarity=0.191 Sum_probs=133.3
Q ss_pred CCCcEEEEEEeCCCCCCCCCCceEEEEEe---CCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEe--cCCC
Q 046057 448 KGEDLVRLYYNKQSSSLAHAKELWIHGGY---NNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFA--DGPP 522 (1198)
Q Consensus 448 ~aG~~V~v~YN~~~g~L~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFs--D~~~ 522 (1198)
+.+..|+|.+|-... -.-.++|+|-|.. ++|....+ ..|......++..|.++|.+|.. ..+.+.|. |..
T Consensus 4 ~~~~~V~V~F~i~y~-T~~GQ~l~VvGs~~~LG~Wd~~kA--~~Ls~~~~~d~~~W~~~v~lp~~-~~ieYKYv~v~~~- 78 (909)
T PLN02950 4 KSLKSVTLSFRIPYY-TQWGQSLLVCGSEPLLGSWNVKKG--LLLSPVHQGDELVWEGSVSVPEG-FSCEYSYYVVDDN- 78 (909)
T ss_pred CCCCcEEEEEEeEEe-cCCCCeEEEEecchhcCCCCcccc--eecccccCCCCCeEEEEEEecCC-CeEEEEEEEEeCC-
Confidence 456668888872211 1135789997776 58974443 34443334446789999999985 45666664 322
Q ss_pred CCCccccCCCCcceEEEe--cCC--CCccchhhH--HHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhh
Q 046057 523 GKAIVYDNNSRQDFHAIV--PKS--IPDELYWVE--EERQTFRK-LQEERRLKEEAARAKAEKTAHMKAETKERTLKRFL 595 (1198)
Q Consensus 523 ~~~~~wDNN~g~dyh~~V--~~~--~~~e~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (1198)
+....|.+...+-+.++- .++ ..-...|.. ++.-.|+. +...-..+...
T Consensus 79 g~vi~WE~g~NR~l~lp~~~~~~~~~~i~D~W~~~~~~~~~~~s~f~~~~~~~~~~------------------------ 134 (909)
T PLN02950 79 KNVLRWEAGKKRKLVLPEGLQGGELVELHDLWQKSGPEALFFRSAFKDVIFRHSWG------------------------ 134 (909)
T ss_pred CceeeeecCCCeeEECCcccCCCceEEEEEEecCCchhhhhhHHHHhhhhcccccc------------------------
Confidence 122357766544344431 111 122345652 12111211 00000000000
Q ss_pred cccceEEecCCCCcCCCceEEEEEcCCCCCCCCCceeEEecc---cccccccCCCCCCcceeecCCcceeEEEeecCCCc
Q 046057 596 LSQKHIVYTDPLDVQAGTTVTVFYNPANTVLNGKSEIWFRCS---FNHWTHRMGILPPQKMVPVKYSTHVKTTVKVPLDA 672 (1198)
Q Consensus 596 ~~~~~~~~~~~~~~~~g~~~~~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a 672 (1198)
.+..+..=... .+..+..|+|.++-.+..+.-.++||+.|+ ...|....+ ..|... ....+.+++.+|.+.
T Consensus 135 ~~~~~~~~~~~-~~~~~~~v~V~F~v~~~~~~~Gq~v~VvGs~~eLGnW~~~~a----~~Ls~~-~~p~W~~~v~lp~~~ 208 (909)
T PLN02950 135 VNTERPLGALN-KPPAPDEIVVRFKIACPRLEEGTSVYVTGSIAQLGNWQVDDG----LKLNYT-GDSIWEADCLVPKSD 208 (909)
T ss_pred ccccccccccc-ccCCCCceeEEEEEecCccCCCCeEEEEechhhcCCCCcccc----cccccC-CCCcEEEEEEecCCC
Confidence 00000000001 113467788888887877777889999985 446665554 345443 345688999999876
Q ss_pred ccccccccccCCCCc--cCCCCCCccCCCccCCCC-----------CCCCcEEEEEc--cccCCCCCCCcHHHH--HHHH
Q 046057 673 YTMDFVFSEWEDGGT--FDNKNGMDYHIPVFGGVV-----------KEPPMHIVHIA--VEMAPIAKVGGLGDV--VTSL 735 (1198)
Q Consensus 673 ~~~~~vfs~~~~~~~--~d~~~~~~~h~~~~g~~~-----------~e~pMKIL~Vs--~e~~P~akvGGl~~v--V~~L 735 (1198)
..+.+-|.....++. ..+...-.+.+|...... ..++-|-.=|. ....|-....|+|++ +..+
T Consensus 209 ~~~EYKyv~~~~~g~v~WE~g~NR~~~~p~~~~~~~~~~~~~~~~~~~~~~R~~Gi~~~l~SLrS~~s~GIGDf~dl~~~ 288 (909)
T PLN02950 209 FPIKYKYALQTAEGLVSLELGVNRELSLDSSSGKPPSYIVASDGAFREMPWRGAGVAVPVFSIRSEEDVGVGEFLDLKLL 288 (909)
T ss_pred ceEEEEEEEEcCCCceEEeeCCCceeecCcccCCceEEEecccccccCCCccceEEEEecccCCCCCCCCeeCHHHHHHH
Confidence 666666644332221 111112222233111000 01111211111 111121111244444 4557
Q ss_pred HHHHHhCCCeEEEEeeCC
Q 046057 736 SRTVQDLNHNVDIILPKY 753 (1198)
Q Consensus 736 arAL~~~GH~V~VItP~y 753 (1198)
+.-+++.|..+.-|+|-.
T Consensus 289 id~~a~~G~~~~QilPl~ 306 (909)
T PLN02950 289 VDWAVKSGLHLVQLLPVN 306 (909)
T ss_pred HHHHHHcCCCEEEECCCC
Confidence 778899999999999853
No 175
>PLN03007 UDP-glucosyltransferase family protein
Probab=83.70 E-value=33 Score=42.34 Aligned_cols=98 Identities=11% Similarity=0.052 Sum_probs=57.1
Q ss_pred CCcEEEEEecCCC--ccCHHHHHHHHHHhhcCCcEEEE-EecCCCh-----hhHHHHHHHHHHhCCCCCCcEEEEccCCh
Q 046057 961 DLPLVGIITRLTH--QKGIHLIKHAIWRTLDRGGQVVL-LGSAPDP-----RIQNDFVNLANELHSSHADRARLCLTYDE 1032 (1198)
Q Consensus 961 d~plIg~VGRL~~--qKGidlIleAl~~ll~~~~qLVI-vGsgpdp-----~i~~~L~~la~eLgl~~~drV~f~g~~d~ 1032 (1198)
...++++.|.... .+.+..+++++..+ +..|++ ++..... .+-+.|.+... +.++++.++.++
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~------~~g~~v~~w~PQ 355 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGS---GQNFIWVVRKNENQGEKEEWLPEGFEERTK------GKGLIIRGWAPQ 355 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHC---CCCEEEEEecCCcccchhhcCCHHHHHHhc------cCCEEEecCCCH
Confidence 4567777887743 33444555555443 667666 3431110 01112222221 356777788776
Q ss_pred HHHHHHHHHccEEEEcCCCCCCc-HHHHHHHHhCCcEEEeCC
Q 046057 1033 PLSHLIYAGADFILVPSIFEPCG-LTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1033 ~~l~~iyA~ADi~LvPS~~EpfG-Lt~LEAMa~G~PvIvt~t 1073 (1198)
..+++.+++-++=+. || .+.+||+++|+|+|+-..
T Consensus 356 ---~~iL~h~~v~~fvtH---~G~nS~~Eal~~GVP~v~~P~ 391 (482)
T PLN03007 356 ---VLILDHQATGGFVTH---CGWNSLLEGVAAGLPMVTWPV 391 (482)
T ss_pred ---HHHhccCccceeeec---CcchHHHHHHHcCCCeeeccc
Confidence 467888877333332 44 689999999999999654
No 176
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=82.48 E-value=13 Score=42.52 Aligned_cols=99 Identities=19% Similarity=0.076 Sum_probs=66.2
Q ss_pred CCcEEEEEecCCCccCH--HHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGI--HLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLI 1038 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGi--dlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~i 1038 (1198)
+..++++.|.=.+.|.+ +.+.+.+..+.+++.++|++|++++ -++..+++.+.++ +..+.+..+-.++..+
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~--e~~~~~~i~~~~~-----~~~l~g~~sL~el~al 251 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA--EKQRAERIAEALP-----GAVVLPKMSLAEVAAL 251 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH--HHHHHHHHHhhCC-----CCeecCCCCHHHHHHH
Confidence 34456666654567764 5677777777666889998865432 1233445554332 2356677788889999
Q ss_pred HHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1039 YAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1039 yA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
++.||++|.+-- |. +=-|.++|+|+|+=
T Consensus 252 i~~a~l~I~~DS----gp-~HlAaa~g~P~i~l 279 (319)
T TIGR02193 252 LAGADAVVGVDT----GL-THLAAALDKPTVTL 279 (319)
T ss_pred HHcCCEEEeCCC----hH-HHHHHHcCCCEEEE
Confidence 999999997642 33 33477899999984
No 177
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=82.22 E-value=7.9 Score=45.24 Aligned_cols=97 Identities=20% Similarity=0.142 Sum_probs=70.4
Q ss_pred CcEEEEEe-cCCCccC--HHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHH
Q 046057 962 LPLVGIIT-RLTHQKG--IHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLI 1038 (1198)
Q Consensus 962 ~plIg~VG-RL~~qKG--idlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~i 1038 (1198)
..++++.| .-...|. .+.+.+.+..+.+++.++++.|+. + -.+..+++++.+. .-+.+++.-+-.++..+
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~-~--e~e~~~~i~~~~~----~~~~l~~k~sL~e~~~l 248 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP-D--EEERAEEIAKGLP----NAVILAGKTSLEELAAL 248 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh-H--HHHHHHHHHHhcC----CccccCCCCCHHHHHHH
Confidence 45677777 6667777 446777788887888999999986 2 2344555665443 23337788888889999
Q ss_pred HHHccEEEEcCCCCCCcHHHHHHHHhCCcEEE
Q 046057 1039 YAGADFILVPSIFEPCGLTQLVAMRYGSIPVV 1070 (1198)
Q Consensus 1039 yA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIv 1070 (1198)
++.||++|.+.- |++ =-|.+.|+|+|+
T Consensus 249 i~~a~l~I~~DS----g~~-HlAaA~~~P~I~ 275 (334)
T COG0859 249 IAGADLVIGNDS----GPM-HLAAALGTPTIA 275 (334)
T ss_pred HhcCCEEEccCC----hHH-HHHHHcCCCEEE
Confidence 999999997753 443 458899999998
No 178
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=80.63 E-value=2.4 Score=43.99 Aligned_cols=48 Identities=19% Similarity=0.160 Sum_probs=34.1
Q ss_pred CcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcc
Q 046057 1022 DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGG 1075 (1198)
Q Consensus 1022 drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGG 1075 (1198)
.+|.+++..++ +..+|+.||++|.- +-+.|+.|++++|+|.|+-...+
T Consensus 55 ~~v~~~~~~~~--m~~~m~~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~ 102 (167)
T PF04101_consen 55 PNVKVFGFVDN--MAELMAAADLVISH----AGAGTIAEALALGKPAIVIPLPG 102 (167)
T ss_dssp CCCEEECSSSS--HHHHHHHHSEEEEC----S-CHHHHHHHHCT--EEEE--TT
T ss_pred CcEEEEechhh--HHHHHHHcCEEEeC----CCccHHHHHHHcCCCeeccCCCC
Confidence 56777766654 68999999998853 34589999999999999865544
No 179
>PLN02554 UDP-glycosyltransferase family protein
Probab=80.41 E-value=41 Score=41.57 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=28.5
Q ss_pred CcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCC--CeEEEEeeC
Q 046057 709 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLN--HNVDIILPK 752 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~G--H~V~VItP~ 752 (1198)
+|||++|.. | .-|--.=..+|++.|+.+| ..|+++++.
T Consensus 2 ~~hvvl~P~---p---aqGHi~P~l~LAk~La~~G~~~~vT~v~t~ 41 (481)
T PLN02554 2 KIELVFIPS---P---GIGHLRPTVELAKLLVDSDDRLSITVIIIP 41 (481)
T ss_pred ceEEEEeCC---c---chhhHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 578888742 2 2355666789999999998 789988764
No 180
>PLN02207 UDP-glycosyltransferase
Probab=80.38 E-value=45 Score=41.25 Aligned_cols=110 Identities=11% Similarity=0.036 Sum_probs=56.1
Q ss_pred HHHHhCCCCCCCcEEEEEecCCC--ccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHH-HHHHHHhCCCCCCcEEEE
Q 046057 951 LQQKVGLRKSDLPLVGIITRLTH--QKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDF-VNLANELHSSHADRARLC 1027 (1198)
Q Consensus 951 Lrq~lGL~~~d~plIg~VGRL~~--qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L-~~la~eLgl~~~drV~f~ 1027 (1198)
+.+-|.-..+...++++.|.+.. .+-+..|+.++..+ +..|+.+=..+.....+.+ ..+.++. +++..+.
T Consensus 265 ~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~----~~~g~i~ 337 (468)
T PLN02207 265 LMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRV----SGRGMIC 337 (468)
T ss_pred HHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhc----CCCeEEE
Confidence 34444332234556777776642 22344555555544 5566653221111000001 1222221 2556666
Q ss_pred ccCChHHHHHHHHHccEEEEcCCCCCCc-HHHHHHHHhCCcEEEeCC
Q 046057 1028 LTYDEPLSHLIYAGADFILVPSIFEPCG-LTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1028 g~~d~~~l~~iyA~ADi~LvPS~~EpfG-Lt~LEAMa~G~PvIvt~t 1073 (1198)
++.++ ..+++...+-.+=+. || .+.+||+.+|+|+|+-..
T Consensus 338 ~W~PQ---~~IL~H~~vg~FvTH---~GwnS~~Eai~~GVP~l~~P~ 378 (468)
T PLN02207 338 GWSPQ---VEILAHKAVGGFVSH---CGWNSIVESLWFGVPIVTWPM 378 (468)
T ss_pred EeCCH---HHHhcccccceeeec---CccccHHHHHHcCCCEEecCc
Confidence 77666 346666666333332 44 588999999999998654
No 181
>PLN02167 UDP-glycosyltransferase family protein
Probab=80.31 E-value=46 Score=41.06 Aligned_cols=105 Identities=14% Similarity=0.138 Sum_probs=53.4
Q ss_pred HHHHhCCCCCCCcEEEEEecCC--CccCHHHHHHHHHHhhcCCcEEEEE-ecCCCh------hhHHHHHHHHHHhCCCCC
Q 046057 951 LQQKVGLRKSDLPLVGIITRLT--HQKGIHLIKHAIWRTLDRGGQVVLL-GSAPDP------RIQNDFVNLANELHSSHA 1021 (1198)
Q Consensus 951 Lrq~lGL~~~d~plIg~VGRL~--~qKGidlIleAl~~ll~~~~qLVIv-Gsgpdp------~i~~~L~~la~eLgl~~~ 1021 (1198)
+.+-+.-.....++++..|.+. ..+-+..|+.++..+ +..|+.+ +..... .+.+.+.+.+.
T Consensus 270 ~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~---~~~flw~~~~~~~~~~~~~~~lp~~~~er~~------- 339 (475)
T PLN02167 270 IMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELV---GCRFLWSIRTNPAEYASPYEPLPEGFMDRVM------- 339 (475)
T ss_pred HHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhC---CCcEEEEEecCcccccchhhhCChHHHHHhc-------
Confidence 3344433223445666777763 233355555555444 5666653 321110 01112222211
Q ss_pred CcEEEEccCChHHHHHHHHHcc--EEEEcCCCCCCc-HHHHHHHHhCCcEEEeCC
Q 046057 1022 DRARLCLTYDEPLSHLIYAGAD--FILVPSIFEPCG-LTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1022 drV~f~g~~d~~~l~~iyA~AD--i~LvPS~~EpfG-Lt~LEAMa~G~PvIvt~t 1073 (1198)
++..+.++.++ ..+++... .||. -|| .+.+||+++|+|.|+-..
T Consensus 340 ~rg~v~~w~PQ---~~iL~h~~vg~fvt-----H~G~nS~~Eal~~GvP~l~~P~ 386 (475)
T PLN02167 340 GRGLVCGWAPQ---VEILAHKAIGGFVS-----HCGWNSVLESLWFGVPIATWPM 386 (475)
T ss_pred cCeeeeccCCH---HHHhcCcccCeEEe-----eCCcccHHHHHHcCCCEEeccc
Confidence 34555566655 34666644 4442 244 589999999999998544
No 182
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=79.43 E-value=6.9 Score=41.75 Aligned_cols=64 Identities=16% Similarity=0.095 Sum_probs=40.6
Q ss_pred CceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh--------------hhHHHHHHhccCEEEEeCHHHHH
Q 046057 831 HPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG--------------THHIGKAMTYADKATTVSHTYSK 896 (1198)
Q Consensus 831 ~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~--------------~~li~~~~~~AD~VitVS~~~a~ 896 (1198)
.+|+|.+.+... ++-+.... ..+.++|.++..|...+. ...+..+ -.||.|+..|...++
T Consensus 59 ~~dll~aTsmld--La~l~gL~---p~l~~~p~ilYFHENQl~YP~~~~~~rd~~~~~~ni~sa-LaAD~v~FNS~~nr~ 132 (168)
T PF12038_consen 59 SYDLLFATSMLD--LATLRGLR---PDLANVPKILYFHENQLAYPVSPGQERDFQYGMNNIYSA-LAADRVVFNSAFNRD 132 (168)
T ss_pred CCCEEEeecccc--HHHHHhhc---cCCCCCCEEEEEecCcccCCCCCCccccccHHHHHHHHH-HhceeeeecchhhHH
Confidence 579999987532 12111111 145689999999987643 1112222 369999999999888
Q ss_pred HHhC
Q 046057 897 EVAG 900 (1198)
Q Consensus 897 el~~ 900 (1198)
.+..
T Consensus 133 sFL~ 136 (168)
T PF12038_consen 133 SFLD 136 (168)
T ss_pred HHHH
Confidence 7653
No 183
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=78.27 E-value=1.6e+02 Score=35.31 Aligned_cols=116 Identities=8% Similarity=0.074 Sum_probs=82.4
Q ss_pred cEEEEEec-CCCccCHHHHHHHHHHhhcCCcEEEE-EecCC-ChhhHHHHHHHHHHhCCCCCCcEEEEc-cCChHHHHHH
Q 046057 963 PLVGIITR-LTHQKGIHLIKHAIWRTLDRGGQVVL-LGSAP-DPRIQNDFVNLANELHSSHADRARLCL-TYDEPLSHLI 1038 (1198)
Q Consensus 963 plIg~VGR-L~~qKGidlIleAl~~ll~~~~qLVI-vGsgp-dp~i~~~L~~la~eLgl~~~drV~f~g-~~d~~~l~~i 1038 (1198)
++-+.+|. -++.-++..+++++++....++++++ +|-|. +..+.+.+.+.+.++-- .+++..+- ..+-++.-.+
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~--~~~~~iL~e~mpf~eYl~l 262 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFG--AENFQILTEFMPFDEYLAL 262 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcC--ccceeEhhhhCCHHHHHHH
Confidence 44444554 56777888888998887667888887 45432 34577777777777643 25676654 4577778899
Q ss_pred HHHccEEEEcCC-CCCCcHHHHHHHHhCCcEEEeCCcccccccc
Q 046057 1039 YAGADFILVPSI-FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVF 1081 (1198)
Q Consensus 1039 yA~ADi~LvPS~-~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~ 1081 (1198)
++.||+.+++.. ..+.|.. +-.+.+|+||+.+...-+.....
T Consensus 263 L~~cDl~if~~~RQQgiGnI-~lLl~~G~~v~L~~~np~~~~l~ 305 (360)
T PF07429_consen 263 LSRCDLGIFNHNRQQGIGNI-CLLLQLGKKVFLSRDNPFWQDLK 305 (360)
T ss_pred HHhCCEEEEeechhhhHhHH-HHHHHcCCeEEEecCChHHHHHH
Confidence 999999999876 5788864 44799999999977655544443
No 184
>PLN03004 UDP-glycosyltransferase
Probab=77.25 E-value=43 Score=41.18 Aligned_cols=80 Identities=13% Similarity=0.003 Sum_probs=47.1
Q ss_pred CcEEEEccCChHHHHHHHHHccEEEEcCCCCCCc-HHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEE
Q 046057 1022 DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCG-LTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGF 1100 (1198)
Q Consensus 1022 drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfG-Lt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~ 1100 (1198)
.++.+..+.++ ..+++.+++..+=+. || .+.+||+.+|+|+|+-... .|...+. ......-..|.
T Consensus 334 ~g~~v~~W~PQ---~~iL~H~~v~~FvTH---~G~nS~lEal~~GVP~v~~P~~--~DQ~~na------~~~~~~~g~g~ 399 (451)
T PLN03004 334 KGMVVKSWAPQ---VPVLNHKAVGGFVTH---CGWNSILEAVCAGVPMVAWPLY--AEQRFNR------VMIVDEIKIAI 399 (451)
T ss_pred CcEEEEeeCCH---HHHhCCCccceEecc---CcchHHHHHHHcCCCEEecccc--ccchhhH------HHHHHHhCceE
Confidence 45666677766 357888888433332 44 6899999999999986542 2222221 00000014566
Q ss_pred EEcC-----CCHHHHHHHHh
Q 046057 1101 SFDG-----ADIAGVDYALN 1115 (1198)
Q Consensus 1101 lf~~-----~D~~~La~AL~ 1115 (1198)
.++. -+.++++.++.
T Consensus 400 ~l~~~~~~~~~~e~l~~av~ 419 (451)
T PLN03004 400 SMNESETGFVSSTEVEKRVQ 419 (451)
T ss_pred EecCCcCCccCHHHHHHHHH
Confidence 6642 26678887776
No 185
>PLN02562 UDP-glycosyltransferase
Probab=75.86 E-value=81 Score=38.72 Aligned_cols=131 Identities=9% Similarity=0.096 Sum_probs=69.9
Q ss_pred CCcEEEEEecCC---CccCHHHHHHHHHHhhcCCcEEEEE-ecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 961 DLPLVGIITRLT---HQKGIHLIKHAIWRTLDRGGQVVLL-GSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 961 d~plIg~VGRL~---~qKGidlIleAl~~ll~~~~qLVIv-Gsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
...+++..|.+. +.+-+..|+.++..+ +..|+.+ ..+....+.+.+.+.. ++++.+.++.++ .
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~~~~~~~-------~~~~~v~~w~PQ---~ 339 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPPGYVERV-------SKQGKVVSWAPQ---L 339 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCHHHHHHh-------ccCEEEEecCCH---H
Confidence 345677777754 233345555555444 5566653 3210001111222221 356777777766 4
Q ss_pred HHHHHccEEEEcCCCCCCc-HHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1037 LIYAGADFILVPSIFEPCG-LTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~~EpfG-Lt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+++..++.++=+. || .+.+||+.+|+|.|+-...+ |...+. . +.... -..|+-+...+.+++++++.
T Consensus 340 ~iL~h~~v~~fvtH---~G~nS~~Eal~~GvP~l~~P~~~--DQ~~na---~-~~~~~--~g~g~~~~~~~~~~l~~~v~ 408 (448)
T PLN02562 340 EVLKHQAVGCYLTH---CGWNSTMEAIQCQKRLLCYPVAG--DQFVNC---A-YIVDV--WKIGVRISGFGQKEVEEGLR 408 (448)
T ss_pred HHhCCCccceEEec---CcchhHHHHHHcCCCEEeCCccc--chHHHH---H-HHHHH--hCceeEeCCCCHHHHHHHHH
Confidence 56777775333332 44 68899999999999865432 222211 0 11100 14567776667788887776
No 186
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=75.19 E-value=14 Score=42.51 Aligned_cols=96 Identities=14% Similarity=0.023 Sum_probs=62.2
Q ss_pred EEEEEecCCCccC--HHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHH
Q 046057 964 LVGIITRLTHQKG--IHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAG 1041 (1198)
Q Consensus 964 lIg~VGRL~~qKG--idlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ 1041 (1198)
+++..|.-...|. .+...+.+..+.+.+.++|+.|++++. .+..+++++. ...+.+++..+-.++..+++.
T Consensus 181 i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e--~~~~~~i~~~-----~~~~~l~g~~sL~elaali~~ 253 (322)
T PRK10964 181 LVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHE--EQRAKRLAEG-----FPYVEVLPKLSLEQVARVLAG 253 (322)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHH--HHHHHHHHcc-----CCcceecCCCCHHHHHHHHHh
Confidence 3344454345565 446777777776678898887434321 2233344331 134667788888889999999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1042 ADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1042 ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
||++|-..- | .+=-|.++|+|+|+=
T Consensus 254 a~l~I~nDS----G-p~HlA~A~g~p~val 278 (322)
T PRK10964 254 AKAVVSVDT----G-LSHLTAALDRPNITL 278 (322)
T ss_pred CCEEEecCC----c-HHHHHHHhCCCEEEE
Confidence 999997643 2 345589999999983
No 187
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=73.68 E-value=78 Score=38.99 Aligned_cols=41 Identities=15% Similarity=0.245 Sum_probs=31.1
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCC
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKY 753 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y 753 (1198)
...+||++|. +. .-|--.=..+|++.|+.+|+.|++++...
T Consensus 5 ~~~~HVvlvP-----fp-aqGHi~P~l~LAk~La~~G~~VT~v~T~~ 45 (451)
T PLN02410 5 PARRRVVLVP-----VP-AQGHISPMMQLAKTLHLKGFSITIAQTKF 45 (451)
T ss_pred CCCCEEEEEC-----CC-ccccHHHHHHHHHHHHcCCCEEEEEeCcc
Confidence 3567999884 22 23556667889999999999999998663
No 188
>PTZ00121 MAEBL; Provisional
Probab=72.41 E-value=11 Score=50.86 Aligned_cols=15 Identities=7% Similarity=0.191 Sum_probs=8.1
Q ss_pred hhhhhcccchhhhcc
Q 046057 53 IFYLKSHYFSRRRQR 67 (1198)
Q Consensus 53 ~~~~~~~~fs~~r~~ 67 (1198)
+|..++.|+++++|.
T Consensus 953 lF~~S~sD~~~sdr~ 967 (2084)
T PTZ00121 953 LFINSPKDLYNSDRK 967 (2084)
T ss_pred HHhhchhhhhhhhcc
Confidence 444566665555544
No 189
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=69.75 E-value=2.3e+02 Score=33.18 Aligned_cols=308 Identities=15% Similarity=0.099 Sum_probs=142.9
Q ss_pred cHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEEEEeCCCCCccccccccC
Q 046057 727 GLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGCVYG 806 (1198)
Q Consensus 727 Gl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~~~f~rg~iYg 806 (1198)
|+.++...+-.-+.+.||++.++.-.-..+......+ ..-+++-.+
T Consensus 2 GVTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~dsH~--------------------~~~~si~k~-------------- 47 (355)
T PF11440_consen 2 GVTRNALEMRDWFDKNGVEFTIVSADEKSFTRPDSHD--------------------SKSFSIPKY-------------- 47 (355)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEETSS--TTTTSSS---------------------TTTEEEE---------------
T ss_pred CccccHHHHHHHHHhcCCeeEEEEecccccCCccccc--------------------cceeeeehh--------------
Confidence 7888888888889999999999985421111000000 001111100
Q ss_pred CCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCC-----hhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---hh-HH
Q 046057 807 CNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWS-----SAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG---TH-HI 877 (1198)
Q Consensus 807 ~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~-----ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~---~~-li 877 (1198)
....+-+.++... ++||+..+... -+.+-.+ .... .---+.+++|...|++... ++ -+
T Consensus 48 ----------~~~e~de~v~~vN-~yDI~m~nSvPa~~vqE~~iNnY-~kii-~~Ik~~ik~V~~~Hdh~~lsI~rn~~l 114 (355)
T PF11440_consen 48 ----------LAKEYDETVKKVN-DYDIVMFNSVPATKVQEAIINNY-EKII-KKIKPSIKVVGFMHDHNKLSIDRNPYL 114 (355)
T ss_dssp ----------TTTHHHHHHHHHT-SSSEEEEEE--BTTS-HHHHHHH-HHHH-HCS-TTSEEEEEE---SHHHHTTBSSH
T ss_pred ----------hHHHHHHHHHHhh-ccCEEEEecccCchHHHHHHHHH-HHHH-HhccccceeEEEeeccceeeccccccH
Confidence 0112333344333 78999887532 2333322 1111 1111245688888987653 11 23
Q ss_pred HHHHhccCEEEEeCHH------HHHHHhCCC-CCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHH
Q 046057 878 GKAMTYADKATTVSHT------YSKEVAGDP-AIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEA 950 (1198)
Q Consensus 878 ~~~~~~AD~VitVS~~------~a~el~~~~-~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~a 950 (1198)
-..|+.+|.|.+.|.. .+.++.-.. .+...-.++..+.|- .|. .+ -..
T Consensus 115 e~~m~~~DvIfshs~~g~f~kv~m~~l~Ps~~~l~~~i~~~p~v~nf------qpp-----------~~--------i~~ 169 (355)
T PF11440_consen 115 EGTMNEMDVIFSHSDNGWFSKVLMKELLPSKVSLFDRIKKFPMVFNF------QPP-----------MD--------INK 169 (355)
T ss_dssp HHHHHH-SEEEES-TTSHHHHTHHHHHS-SS--SSS-------EEE---------------------B---------HHH
T ss_pred HHHHHhhcEEEeccccchHHHHHHHhhccccCchhhhhhhcceeeec------CCc-----------cc--------HHH
Confidence 4577889999987653 333443111 111111222223221 110 01 112
Q ss_pred HHHHhCCCCCCCcEE---EEEecCCCccCHHHHHHHHHHhhc-CCcEEEEEecCCChhhHHHHHHHHHH-----------
Q 046057 951 LQQKVGLRKSDLPLV---GIITRLTHQKGIHLIKHAIWRTLD-RGGQVVLLGSAPDPRIQNDFVNLANE----------- 1015 (1198)
Q Consensus 951 Lrq~lGL~~~d~plI---g~VGRL~~qKGidlIleAl~~ll~-~~~qLVIvGsgpdp~i~~~L~~la~e----------- 1015 (1198)
.|..+-.+ .....+ .++||.+-.||...+++--+..++ .+..-++-|-...+ ++....+.
T Consensus 170 ~Rstywkd-~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~----A~~~i~d~~~~~~y~~~~~ 244 (355)
T PF11440_consen 170 YRSTYWKD-VSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSP----AKISIKDHGIPYEYYPKLD 244 (355)
T ss_dssp HHHHH----GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SST----HHHHHHHTT--EEEE-CTG
T ss_pred HHHHHhhh-hHhhhcccceeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCC----ceeeeecCCcccccCcccc
Confidence 23333222 123444 899999999999999998777765 47888888853222 22222222
Q ss_pred ---hCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCC------CCCcHHHHHHHHhCCcEEE-eCCcccccccccccc
Q 046057 1016 ---LHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIF------EPCGLTQLVAMRYGSIPVV-RKTGGLYDTVFDVDH 1085 (1198)
Q Consensus 1016 ---Lgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~------EpfGLt~LEAMa~G~PvIv-t~tGGl~E~V~d~d~ 1085 (1198)
..+.-..-+.+++.|-..+.-..++.+=+.+--|.. +..-.+++|..|||+.||- ..+|----.--|+.+
T Consensus 245 ~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~ 324 (355)
T PF11440_consen 245 CDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTR 324 (355)
T ss_dssp GGG---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSB
T ss_pred ccCcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCce
Confidence 122212247788888777777788888777665542 4466899999999999997 333322221111100
Q ss_pred chhhhhccCCCCcEEEEcCCCHHHHHHHHhhc
Q 046057 1086 DKERAQALDLEPNGFSFDGADIAGVDYALNSI 1117 (1198)
Q Consensus 1086 ~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~ 1117 (1198)
- ....-..++|+..|.++..+.|.++
T Consensus 325 ~------~~~~~~~I~~De~dle~T~ekl~E~ 350 (355)
T PF11440_consen 325 Y------IDHPYSAIYFDENDLESTVEKLIEV 350 (355)
T ss_dssp G------GSS--S-EEE-TTSHHHHHHHHHHH
T ss_pred e------eccCcceeEeccchHHHHHHHHHHH
Confidence 0 0112457889999998887777633
No 190
>PLN02208 glycosyltransferase family protein
Probab=69.70 E-value=1.4e+02 Score=36.77 Aligned_cols=40 Identities=25% Similarity=0.306 Sum_probs=32.4
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|+++||++|.. | .-|--.=+.+|++.|+.+|+.|+++++.
T Consensus 2 ~~~~hvv~~P~---p---aqGHi~P~l~LAk~La~~G~~VT~vtt~ 41 (442)
T PLN02208 2 EPKFHAFMFPW---F---AFGHMIPFLHLANKLAEKGHRVTFLLPK 41 (442)
T ss_pred CCCCEEEEecC---c---cccHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 67789998852 2 3466777889999999999999999954
No 191
>PLN02670 transferase, transferring glycosyl groups
Probab=68.60 E-value=1.6e+02 Score=36.57 Aligned_cols=39 Identities=15% Similarity=0.138 Sum_probs=29.9
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
.+.||++|.. | .-|--.=..+|++.|+.+|..|++++..
T Consensus 5 ~~~HVvl~P~---p---aqGHi~P~l~LAk~La~~G~~vT~v~t~ 43 (472)
T PLN02670 5 EVLHVAMFPW---L---AMGHLIPFLRLSKLLAQKGHKISFISTP 43 (472)
T ss_pred CCcEEEEeCC---h---hhhHHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4568888742 2 2355666789999999999999999865
No 192
>cd02858 Esterase_N_term Esterase N-terminal domain. Esterases catalyze the hydrolysis of organic esters to release an alcohol or thiol and acid. The term can be applied to enzymes that hydrolyze carboxylate, phosphate and sulphate esters, but is more often restricted to the first class of substrate. The N-terminus of esterase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=68.19 E-value=20 Score=33.74 Aligned_cols=58 Identities=16% Similarity=0.373 Sum_probs=36.7
Q ss_pred CCCeEEEEEcccCCCCCCCCcEEEEeecCCccccccceecccccCCCCeEEEEEE-ecCCceeEeEEEEcC
Q 046057 274 PDQDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVH-VPKEAFKIDFVFFNG 343 (1198)
Q Consensus 274 aG~~v~v~yN~~l~~L~~~~~v~ih~GfN~W~~~~~~~~~~~t~~~~dWw~~~v~-VP~~A~~lnFvF~dg 343 (1198)
++..++..+- + ..+.+|.|.+-||+|. ...|.+. +.+||++++. ++...|+..|+. ||
T Consensus 4 ~~~~v~F~vw---A--P~A~~V~L~~~~~~~~----~~~m~~~--~~G~W~~~v~~l~~g~Y~Y~~~v-dg 62 (85)
T cd02858 4 ADRTVTFRLF---A--PKANEVQVRGSWGGAG----SHPMTKD--EAGVWSVTTGPLAPGIYTYSFLV-DG 62 (85)
T ss_pred CCCcEEEEEE---C--CCCCEEEEEeecCCCc----cEeCeEC--CCeEEEEEECCCCCcEEEEEEEE-CC
Confidence 3445555555 2 2567899988888763 1345443 4689999984 444457777776 44
No 193
>PLN02555 limonoid glucosyltransferase
Probab=68.16 E-value=1.4e+02 Score=37.04 Aligned_cols=39 Identities=13% Similarity=0.192 Sum_probs=30.3
Q ss_pred CcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCC
Q 046057 709 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKY 753 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y 753 (1198)
+.||++|. .| .-|--.=..+|++.|+.+|..|++++...
T Consensus 7 ~~HVv~~P---fp---aqGHi~Pml~lA~~La~~G~~vT~v~T~~ 45 (480)
T PLN02555 7 LVHVMLVS---FP---GQGHVNPLLRLGKLLASKGLLVTFVTTES 45 (480)
T ss_pred CCEEEEEC---Cc---ccccHHHHHHHHHHHHhCCCeEEEEeccc
Confidence 45888884 22 34666678899999999999999999763
No 194
>cd05808 CBM20_alpha_amylase Alpha-amylase, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. This domain is found in several bacterial and fungal alpha-amylases including the maltopentaose-forming amylases (G5-amylases). Most alpha-amylases have, in addition to the C-terminal CBM20 domain, an N-terminal catalytic domain belonging to glycosyl hydrolase family 13, which hydrolyzes internal alpha-1,4-glucosidic bonds in starch and related saccharides, yielding maltotriose and maltose. Two types of soluble substrates are used by alpha-amylases including long substrates (e.g. amylose) and short substrates (e.g. maltodextrins or maltooligosaccharides). The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. lafo
Probab=67.95 E-value=11 Score=35.77 Aligned_cols=64 Identities=14% Similarity=0.483 Sum_probs=37.9
Q ss_pred CCCceEEEEE---eCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEE--ecCCCCCCccccCCCCcceE
Q 046057 466 HAKELWIHGG---YNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVF--ADGPPGKAIVYDNNSRQDFH 537 (1198)
Q Consensus 466 ga~~I~lh~G---~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvF--sD~~~~~~~~wDNN~g~dyh 537 (1198)
-.++|+|-|. +++|...... .|.. .++..|.+++.+|.+. .+.|-| .++. +...|.+...+.+.
T Consensus 13 ~ge~l~v~G~~~~lG~W~~~~a~--~l~~---~~~~~W~~~v~l~~~~-~~eYKy~~~~~~--~~~~WE~~~nr~~~ 81 (95)
T cd05808 13 WGQNVYVVGNVPELGNWSPANAV--ALSA---ATYPVWSGTVDLPAGT-AIEYKYIKKDGS--GTVTWESGPNRTAT 81 (95)
T ss_pred CCCEEEEEeCcHHhCCCChhhCc--cCCC---CCCCCEEEEEEeCCCC-eEEEEEEEECCC--CcEEEecCCCEEEE
Confidence 4578899774 6899844322 3322 2345599999999865 455554 3322 23468776544443
No 195
>PLN00164 glucosyltransferase; Provisional
Probab=67.82 E-value=1.8e+02 Score=36.23 Aligned_cols=38 Identities=5% Similarity=0.043 Sum_probs=28.0
Q ss_pred CcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCC----CeEEEEeeC
Q 046057 709 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLN----HNVDIILPK 752 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~G----H~V~VItP~ 752 (1198)
+.||++|- +. .-|--.-..+|++.|+.+| +.|+|++..
T Consensus 3 ~~HVVlvP-----fp-aqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~ 44 (480)
T PLN00164 3 APTVVLLP-----VW-GSGHLMSMLEAGKRLLASSGGGALSLTVLVMP 44 (480)
T ss_pred CCEEEEeC-----Cc-chhHHHHHHHHHHHHHhCCCCCcEEEEEEEcC
Confidence 34888773 32 2366677889999999986 789998855
No 196
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=67.78 E-value=5.5 Score=40.28 Aligned_cols=40 Identities=25% Similarity=0.269 Sum_probs=26.3
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||+||.. |+....=-.+....|+.+.+++||+|.++.+.
T Consensus 1 Mki~fvmD---pi~~i~~~kDTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 1 MKIAFVMD---PIESIKPYKDTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GG
T ss_pred CeEEEEeC---CHHHCCCCCChHHHHHHHHHHCCCEEEEEEcC
Confidence 89999965 54332223567788999999999999999876
No 197
>PLN02173 UDP-glucosyl transferase family protein
Probab=67.11 E-value=1.4e+02 Score=36.87 Aligned_cols=48 Identities=6% Similarity=-0.085 Sum_probs=34.2
Q ss_pred CCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC
Q 046057 1021 ADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1021 ~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
++++.+.++.++ ..+++..++..+=+. +-..+.+||+.+|+|.|+-..
T Consensus 316 ~~~~~i~~W~PQ---~~iL~H~~v~~FvtH--cGwnS~~Eai~~GVP~l~~P~ 363 (449)
T PLN02173 316 KDKSLVLKWSPQ---LQVLSNKAIGCFMTH--CGWNSTMEGLSLGVPMVAMPQ 363 (449)
T ss_pred CCceEEeCCCCH---HHHhCCCccceEEec--CccchHHHHHHcCCCEEecCc
Confidence 367888888775 357787775444443 233789999999999998643
No 198
>PLN03086 PRLI-interacting factor K; Provisional
Probab=66.52 E-value=30 Score=43.62 Aligned_cols=12 Identities=17% Similarity=0.346 Sum_probs=7.2
Q ss_pred cCCCceEEEEEc
Q 046057 609 VQAGTTVTVFYN 620 (1198)
Q Consensus 609 ~~~g~~~~~~y~ 620 (1198)
+..|+++.|.||
T Consensus 216 LT~Gd~i~i~~~ 227 (567)
T PLN03086 216 LSEDDVLVVNYG 227 (567)
T ss_pred ccCCCEEEEecC
Confidence 445666666665
No 199
>KOG3986 consensus Protein phosphatase, regulatory subunit PPP1R3C/D [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=64.20 E-value=11 Score=46.99 Aligned_cols=73 Identities=25% Similarity=0.391 Sum_probs=49.7
Q ss_pred CCcEEEEeecCCccccccceeccc--cc-C---CCCeEEEEEEecCCce---eEeEEEE---cCCcccccCCCCceEEEE
Q 046057 292 EPDVLIMGAFNDWRWKSFTFRLNK--TH-L---KGDWWSCQVHVPKEAF---KIDFVFF---NGQNIYENNDQKDFCIAV 359 (1198)
Q Consensus 292 ~~~v~ih~GfN~W~~~~~~~~~~~--t~-~---~~dWw~~~v~VP~~A~---~lnFvF~---dg~~~wDNN~g~d~~~~V 359 (1198)
+..|.+|+-+++|+.......... .. . -.|=|.-.|..|+.-. +|-||.. +|+.-||||+|.||++.+
T Consensus 391 ~k~v~vryt~Dswrs~~d~~~sY~s~~~~~p~~~~DiF~F~i~~~p~~~~~~~leF~I~y~t~~qe~WDNNdg~NY~i~~ 470 (526)
T KOG3986|consen 391 EKLVSVRYTWDSWRSTHDSSCSYISSGGIFPGTDSDIFSFKIDLPPKPISLGKLEFCIRYQTNGQEYWDNNDGKNYIIDV 470 (526)
T ss_pred cceeEEEecccccccccccceeeeccCCCCCCccccceeeeccCCCCCCcccceEEEEEeccCCceeeccCCCcceEEEe
Confidence 468899999999988543333222 11 1 1333666666655543 5688885 458999999999999998
Q ss_pred cCCcc
Q 046057 360 EGLMD 364 (1198)
Q Consensus 360 ~~g~~ 364 (1198)
....+
T Consensus 471 ~~~~~ 475 (526)
T KOG3986|consen 471 VTKSP 475 (526)
T ss_pred ecCCC
Confidence 85443
No 200
>cd05809 CBM20_beta_amylase Beta-amylase, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Beta-amylase has, in addition to its C-terminal CBM20 domain, an N-terminal catalytic domain belonging to glycosyl hydrolase family 14, which hydrolyzes the alpha-1,4-glucosidic bonds of starch, yielding beta-maltose from the nonreducing end of the substrate. Beta-amylase is found in both plants and microorganisms, however the plant members lack a C-terminal CBM20 domain and are not included in this group. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1
Probab=62.97 E-value=24 Score=34.17 Aligned_cols=85 Identities=14% Similarity=0.241 Sum_probs=44.7
Q ss_pred EEEEEEeCCCCCCCCCCceEEEEE---eCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEE--ecCCCCCCc
Q 046057 452 LVRLYYNKQSSSLAHAKELWIHGG---YNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVF--ADGPPGKAI 526 (1198)
Q Consensus 452 ~V~v~YN~~~g~L~ga~~I~lh~G---~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvF--sD~~~~~~~ 526 (1198)
.|-|.+.-+...+.-.++|||-|. .++|..... .+.+.....+..|.+++.+|... .+.|-| .+.. +...
T Consensus 2 ~v~v~f~v~~~~t~~G~~v~v~Gs~~~LG~W~~~~~---~~~~~~~~~~~~W~~~~~lp~~~-~veyKyv~~~~~-~~~~ 76 (99)
T cd05809 2 PVPQTFVVKNVPTTIGETVYITGSRAELGNWDTKQY---PIQLYYNSHSNDWRGTVHLPAGR-NIEFKAIKKSKD-GTNK 76 (99)
T ss_pred ceEEEEEEcccccCCCCEEEEEeChHHhCCCChhhh---hhccccCCCCCCEEEEEEecCCC-cEEEEEEEEcCC-CCee
Confidence 355555543344455678899763 479973321 12122212233499999999875 455444 3222 1135
Q ss_pred cccCCCCcceEEEecCC
Q 046057 527 VYDNNSRQDFHAIVPKS 543 (1198)
Q Consensus 527 ~wDNN~g~dyh~~V~~~ 543 (1198)
.|.+. .|-++.++.+
T Consensus 77 ~WE~g--~nr~~~~p~~ 91 (99)
T cd05809 77 SWQGG--QQSWYPVPLG 91 (99)
T ss_pred EEecC--CCeeEECCCC
Confidence 67664 4445555544
No 201
>KOG1144 consensus Translation initiation factor 5B (eIF-5B) [Translation, ribosomal structure and biogenesis]
Probab=62.75 E-value=25 Score=45.12 Aligned_cols=27 Identities=15% Similarity=0.046 Sum_probs=16.5
Q ss_pred CcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 726 GGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 726 GGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
-|++.-...-.+-|+.+.....|.+.+
T Consensus 575 hGlepqtiESi~lLR~rktpFivALNK 601 (1064)
T KOG1144|consen 575 HGLEPQTIESINLLRMRKTPFIVALNK 601 (1064)
T ss_pred ccCCcchhHHHHHHHhcCCCeEEeehh
Confidence 456666666666677776666665543
No 202
>KOG3986 consensus Protein phosphatase, regulatory subunit PPP1R3C/D [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=62.04 E-value=14 Score=45.93 Aligned_cols=75 Identities=13% Similarity=0.261 Sum_probs=47.8
Q ss_pred CCceEEEEEeCCCCCCccceeeec--cccCCC--CCeEEEEEEecCCce---EEEEEEecCCCCCCccccCCCCcceEEE
Q 046057 467 AKELWIHGGYNNWKDGLSIVARLV--SSERTD--GDWWYAKVSVPDQAL---VLDWVFADGPPGKAIVYDNNSRQDFHAI 539 (1198)
Q Consensus 467 a~~I~lh~G~N~W~~~~~~~~~l~--~~~~~~--g~ww~atV~VP~~A~---~ldFvFsD~~~~~~~~wDNN~g~dyh~~ 539 (1198)
...|.+|+-|+.|..-.+..-.-. .....+ -|=|.-.+..|..-. .|-||..-.. -++.-||||+|.||.+.
T Consensus 391 ~k~v~vryt~Dswrs~~d~~~sY~s~~~~~p~~~~DiF~F~i~~~p~~~~~~~leF~I~y~t-~~qe~WDNNdg~NY~i~ 469 (526)
T KOG3986|consen 391 EKLVSVRYTWDSWRSTHDSSCSYISSGGIFPGTDSDIFSFKIDLPPKPISLGKLEFCIRYQT-NGQEYWDNNDGKNYIID 469 (526)
T ss_pred cceeEEEecccccccccccceeeeccCCCCCCccccceeeeccCCCCCCcccceEEEEEecc-CCceeeccCCCcceEEE
Confidence 678999999999975443222212 111111 134555555544332 5689887654 35689999999999999
Q ss_pred ecC
Q 046057 540 VPK 542 (1198)
Q Consensus 540 V~~ 542 (1198)
+.-
T Consensus 470 ~~~ 472 (526)
T KOG3986|consen 470 VVT 472 (526)
T ss_pred eec
Confidence 853
No 203
>cd05807 CBM20_CGTase CGTase, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. CGTase, also known as cyclodextrin glycosyltransferase and cyclodextrin glucanotransferase, catalyzes the formation of various cyclodextrins (alpha-1,4-glucans) from starch. CGTase has, in addition to its C-terminal CBM20 domain, an N-terminal catalytic domain belonging to glycosyl hydrolase family 13 and an IPT domain of unknown function. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific
Probab=61.98 E-value=32 Score=33.30 Aligned_cols=85 Identities=18% Similarity=0.393 Sum_probs=46.3
Q ss_pred EEEEEEeCCCCCCCCCCceEEEEEe---CCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEE--ecCCCCCCc
Q 046057 452 LVRLYYNKQSSSLAHAKELWIHGGY---NNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVF--ADGPPGKAI 526 (1198)
Q Consensus 452 ~V~v~YN~~~g~L~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvF--sD~~~~~~~ 526 (1198)
.|.|.+.-+...+.-.++|||-|.. .+|.-.....+..... ......|.+++.+|... .+.|-| .|.. +..
T Consensus 2 ~v~v~f~v~~~~t~~Gq~l~v~Gs~~~LG~W~~~~a~~~~~~~~-~~~~~~W~~~~~lp~~~-~~eyK~~~~~~~--~~~ 77 (101)
T cd05807 2 QVSVRFVVNNATTQLGENVYLVGNVHELGNWDPSKAIGPFFNQV-VYQYPNWYYDVSVPAGT-TIEFKFIKKNGD--NTV 77 (101)
T ss_pred cEEEEEEEeccccCCCCEEEEEECHHHHCCCChHHccccccccC-CCcCCcEEEEEEcCCCC-cEEEEEEEECCC--CCE
Confidence 4666666444444556788997665 5997433221111111 11223499999999876 455544 3222 336
Q ss_pred cccCCCCcceEEEecC
Q 046057 527 VYDNNSRQDFHAIVPK 542 (1198)
Q Consensus 527 ~wDNN~g~dyh~~V~~ 542 (1198)
.|.+... -++.++.
T Consensus 78 ~WE~g~n--r~~~~p~ 91 (101)
T cd05807 78 TWESGSN--HTYTAPS 91 (101)
T ss_pred EEEeCCC--EEEeCCC
Confidence 7877444 4444443
No 204
>KOG3654 consensus Uncharacterized CH domain protein [Cytoskeleton]
Probab=60.95 E-value=38 Score=41.44 Aligned_cols=14 Identities=14% Similarity=0.226 Sum_probs=6.1
Q ss_pred hhHHHHHhhhHHHH
Q 046057 230 ASEDASLKLKKEVE 243 (1198)
Q Consensus 230 ~~~~~~~~~~~~~~ 243 (1198)
+++.+.--|..+|.
T Consensus 201 kln~~ls~lqq~mq 214 (708)
T KOG3654|consen 201 KLNAALSSLQQDMQ 214 (708)
T ss_pred HHHHHHHHHHHHHH
Confidence 33443334455554
No 205
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=60.29 E-value=90 Score=35.85 Aligned_cols=104 Identities=8% Similarity=-0.047 Sum_probs=69.1
Q ss_pred cEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecC-----------CChhhHHHHHHHHHHhCCCCCCcEEEEccCC
Q 046057 963 PLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSA-----------PDPRIQNDFVNLANELHSSHADRARLCLTYD 1031 (1198)
Q Consensus 963 plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsg-----------pdp~i~~~L~~la~eLgl~~~drV~f~g~~d 1031 (1198)
++++++|-=. -...+.+++.+.++++-+++++..|.- +.......++++++++|+. .+.-.++
T Consensus 27 ~~~~iaGPCs-ie~~~~~~~~A~~lk~~g~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~-----~~te~~d 100 (266)
T PRK13398 27 EKIIIAGPCA-VESEEQMVKVAEKLKELGVHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLP-----VVTEVMD 100 (266)
T ss_pred CEEEEEeCCc-CCCHHHHHHHHHHHHHcCCCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCC-----EEEeeCC
Confidence 4555555533 346778888888888888898888832 1223345678888888883 3444556
Q ss_pred hHHHHHHHHHccEEEEcCCC-CCCcHHHHHHHHhCCcEEEeCC
Q 046057 1032 EPLSHLIYAGADFILVPSIF-EPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1032 ~~~l~~iyA~ADi~LvPS~~-EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
...+..+..-+|++-++|+- +.+.| +-++...|+||+..+-
T Consensus 101 ~~~~~~l~~~vd~~kIga~~~~n~~L-L~~~a~~gkPV~lk~G 142 (266)
T PRK13398 101 TRDVEEVADYADMLQIGSRNMQNFEL-LKEVGKTKKPILLKRG 142 (266)
T ss_pred hhhHHHHHHhCCEEEECcccccCHHH-HHHHhcCCCcEEEeCC
Confidence 66666666679999999973 44332 2344567999998543
No 206
>PLN02534 UDP-glycosyltransferase
Probab=60.04 E-value=2.9e+02 Score=34.53 Aligned_cols=110 Identities=5% Similarity=-0.056 Sum_probs=57.9
Q ss_pred HHhCCCCCCCcEEEEEecCCC--ccCHHHHHHHHHHhhcCCcEEEEEecCCC--hhhHHHH--HHHHHHhCCCCCCcEEE
Q 046057 953 QKVGLRKSDLPLVGIITRLTH--QKGIHLIKHAIWRTLDRGGQVVLLGSAPD--PRIQNDF--VNLANELHSSHADRARL 1026 (1198)
Q Consensus 953 q~lGL~~~d~plIg~VGRL~~--qKGidlIleAl~~ll~~~~qLVIvGsgpd--p~i~~~L--~~la~eLgl~~~drV~f 1026 (1198)
+-|.-..+...++++.|.+.. .+-+..+..++..+ +.+|+.+=..+. ......+ +.+.+... +.++++
T Consensus 275 ~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~---~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~---~~g~~v 348 (491)
T PLN02534 275 EWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEAS---KKPFIWVIKTGEKHSELEEWLVKENFEERIK---GRGLLI 348 (491)
T ss_pred HHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhC---CCCEEEEEecCccccchhhhcCchhhHHhhc---cCCeec
Confidence 344333234567777787752 22244444555544 446655432110 1111111 11222211 345666
Q ss_pred EccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC
Q 046057 1027 CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1027 ~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
.++.++ ..+++..++..+=+. +-..+++||+.+|+|.|+-..
T Consensus 349 ~~w~pq---~~iL~h~~v~~fvtH--~G~ns~~ea~~~GvP~v~~P~ 390 (491)
T PLN02534 349 KGWAPQ---VLILSHPAIGGFLTH--CGWNSTIEGICSGVPMITWPL 390 (491)
T ss_pred cCCCCH---HHHhcCCccceEEec--CccHHHHHHHHcCCCEEeccc
Confidence 677776 457888887433332 334789999999999998654
No 207
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=58.69 E-value=70 Score=36.03 Aligned_cols=98 Identities=13% Similarity=0.093 Sum_probs=55.6
Q ss_pred CCcEEEEEecCCCc-------cCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHh-CCCCCCcEEEEc-c
Q 046057 961 DLPLVGIITRLTHQ-------KGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANEL-HSSHADRARLCL-T 1029 (1198)
Q Consensus 961 d~plIg~VGRL~~q-------KGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eL-gl~~~drV~f~g-~ 1029 (1198)
+++.|+++...... .....+.+.+..+.+ ++.+||+==- |........ .+..++ +. .++.++. .
T Consensus 116 ~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~H-P~~~~~~~~-~~~~~~~~~---~~~~~~~~~ 190 (269)
T PF05159_consen 116 NKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPH-PDERGGNKY-SYLEELPNL---PNVVIIDDD 190 (269)
T ss_pred CCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEEC-chhhCCCCh-hHhhhhhcC---CCeEEECCC
Confidence 55677777776544 234445555555543 3678776432 311000111 222222 22 3344432 3
Q ss_pred CChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1030 YDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1030 ~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
.+ +..++..||.++.-+ +.+.+|||.+|+|||+-
T Consensus 191 ~~---~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 191 VN---LYELLEQSDAVVTIN-----STVGLEALLHGKPVIVF 224 (269)
T ss_pred CC---HHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEe
Confidence 33 578899999987653 57899999999999994
No 208
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=58.25 E-value=14 Score=40.39 Aligned_cols=38 Identities=18% Similarity=0.326 Sum_probs=28.7
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYD 754 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~ 754 (1198)
||||+....-. .+.-+..|.++|++.||+|.|++|...
T Consensus 1 M~ILlTNDDGi-------~a~Gi~aL~~~L~~~g~~V~VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDGI-------DAPGIRALAKALSALGHDVVVVAPDSE 38 (196)
T ss_dssp SEEEEE-SS-T-------TSHHHHHHHHHHTTTSSEEEEEEESSS
T ss_pred CeEEEEcCCCC-------CCHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 89998765322 245688899999888999999999854
No 209
>PF07046 CRA_rpt: Cytoplasmic repetitive antigen (CRA) like repeat; InterPro: IPR009761 This family consists of several repeats of around 42 residues in length. These repeated sequences are found in multiple copies in Trypanosoma cruzi antigens, Q26907 from SWISSPROT contains 23 copies of this repeat [].
Probab=57.66 E-value=32 Score=28.35 Aligned_cols=6 Identities=50% Similarity=0.778 Sum_probs=2.5
Q ss_pred HHHHHH
Q 046057 376 KRREQE 381 (1198)
Q Consensus 376 ~r~~~e 381 (1198)
||+..|
T Consensus 4 K~kaaE 9 (42)
T PF07046_consen 4 KRKAAE 9 (42)
T ss_pred HHHHHH
Confidence 444443
No 210
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=57.26 E-value=51 Score=36.52 Aligned_cols=103 Identities=17% Similarity=0.063 Sum_probs=63.4
Q ss_pred CccCHHHHHHHHHHhhc-CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccC-ChHHHHHHHHHccEEEEcCC
Q 046057 973 HQKGIHLIKHAIWRTLD-RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTY-DEPLSHLIYAGADFILVPSI 1050 (1198)
Q Consensus 973 ~qKGidlIleAl~~ll~-~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~-d~~~l~~iyA~ADi~LvPS~ 1050 (1198)
..|=+..|..|+.-+.. .+..++++|..+ ..+...++.|+..|..+- .-+|+|+. ....+ .-+.-=|++++..-
T Consensus 48 L~kT~~~L~~A~~~i~~~~~~~ILfVgTk~--~~~~~v~k~A~~~g~~~v-~~RWlgG~LTN~~~-~~~~~Pdliiv~dp 123 (204)
T PRK04020 48 VRKTDERIRIAAKFLSRYEPEKILVVSSRQ--YGQKPVQKFAEVVGAKAI-TGRFIPGTLTNPSL-KGYIEPDVVVVTDP 123 (204)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEeCCH--HHHHHHHHHHHHhCCeee-cCccCCCcCcCcch-hccCCCCEEEEECC
Confidence 34555566666655443 467888899853 466778888888876432 22566664 33322 22234455554432
Q ss_pred CCCCcHHHHHHHHhCCcEEE-eCCccccccc
Q 046057 1051 FEPCGLTQLVAMRYGSIPVV-RKTGGLYDTV 1080 (1198)
Q Consensus 1051 ~EpfGLt~LEAMa~G~PvIv-t~tGGl~E~V 1080 (1198)
. .-..++.||...|+|+|+ .++..-++.|
T Consensus 124 ~-~~~~AI~EA~kl~IP~IaivDTn~dp~~V 153 (204)
T PRK04020 124 R-GDAQAVKEAIEVGIPVVALCDTDNLTSNV 153 (204)
T ss_pred c-ccHHHHHHHHHhCCCEEEEEeCCCCcccC
Confidence 2 125788999999999998 5555555554
No 211
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=57.15 E-value=90 Score=38.20 Aligned_cols=123 Identities=11% Similarity=-0.037 Sum_probs=63.6
Q ss_pred CCcEEEEEecCCCccC----HHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 961 DLPLVGIITRLTHQKG----IHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 961 d~plIg~VGRL~~qKG----idlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
+..+++..|.+.. .- ...|++|+..+ +.+|+..=.+..+ ..+ +.++.+..+.++ .
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~---~~~~iW~~~~~~~------~~l--------~~n~~~~~W~PQ---~ 334 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENL---PQRFIWKYEGEPP------ENL--------PKNVLIVKWLPQ---N 334 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCS---TTEEEEEETCSHG------CHH--------HTTEEEESS--H---H
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhC---CCccccccccccc------ccc--------cceEEEeccccc---h
Confidence 4456777787752 12 33344555444 4477775443111 111 357888888876 3
Q ss_pred HHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCC--CHHHHHHHH
Q 046057 1037 LIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVDYAL 1114 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La~AL 1114 (1198)
.+++...+-++=+. +--.+++||+.+|+|+|+-..- .|-..+. .+++.. ..|..++.. +.+.|..+|
T Consensus 335 ~lL~hp~v~~fitH--gG~~s~~Ea~~~gvP~l~~P~~--~DQ~~na----~~~~~~---G~g~~l~~~~~~~~~l~~ai 403 (500)
T PF00201_consen 335 DLLAHPRVKLFITH--GGLNSTQEALYHGVPMLGIPLF--GDQPRNA----ARVEEK---GVGVVLDKNDLTEEELRAAI 403 (500)
T ss_dssp HHHTSTTEEEEEES----HHHHHHHHHCT--EEE-GCS--TTHHHHH----HHHHHT---TSEEEEGGGC-SHHHHHHHH
T ss_pred hhhhcccceeeeec--cccchhhhhhhccCCccCCCCc--ccCCccc----eEEEEE---eeEEEEEecCCcHHHHHHHH
Confidence 56766555333332 3346899999999999995432 2333221 122333 457777644 446777777
Q ss_pred h
Q 046057 1115 N 1115 (1198)
Q Consensus 1115 ~ 1115 (1198)
.
T Consensus 404 ~ 404 (500)
T PF00201_consen 404 R 404 (500)
T ss_dssp H
T ss_pred H
Confidence 6
No 212
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=57.00 E-value=2.8e+02 Score=29.81 Aligned_cols=93 Identities=17% Similarity=0.230 Sum_probs=54.0
Q ss_pred ccCHHHHHHHHHHhhcCCcEEEE--EecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCC
Q 046057 974 QKGIHLIKHAIWRTLDRGGQVVL--LGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIF 1051 (1198)
Q Consensus 974 qKGidlIleAl~~ll~~~~qLVI--vGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~ 1051 (1198)
..-.+.+...+..+.+.+.++++ ....+.......+......... ...........+..++..+++.+|++|-..++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Is~RlH 267 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDDEDDDDFNEIDIKAEK-FFNVIIIDYSLSPDELLELISQADLVISMRLH 267 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccchhhHHHHHhhhhhccc-ccceeEecCCCCHHHHHHHHhcCCEEEecCCH
Confidence 33455666677777665544333 3332222222222222110111 12233333445778889999999999988886
Q ss_pred CCCcHHHHHHHHhCCcEEEeC
Q 046057 1052 EPCGLTQLVAMRYGSIPVVRK 1072 (1198)
Q Consensus 1052 EpfGLt~LEAMa~G~PvIvt~ 1072 (1198)
..+-|+.+|+|+|+-.
T Consensus 268 -----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 268 -----GAILALSLGVPVIAIS 283 (286)
T ss_pred -----HHHHHHHcCCCEEEEe
Confidence 5688999999999844
No 213
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This central domain of TPP enzymes contains a 2-fold Rossman fold. ; GO: 0000287 magnesium ion binding, 0030976 thiamine pyrophosphate binding; PDB: 1OZH_C 1OZF_B 1OZG_B 2Q29_B 2Q28_A 2Q27_B 1OVM_B 1PVD_A 1PYD_B 2VK1_C ....
Probab=56.86 E-value=26 Score=35.30 Aligned_cols=57 Identities=19% Similarity=0.247 Sum_probs=34.7
Q ss_pred CcEEEEEecCCC-hhhHHHHHHHHHHhCCC--------------CCCcEEEEccCChHHHHHHHHHccEEEE
Q 046057 991 GGQVVLLGSAPD-PRIQNDFVNLANELHSS--------------HADRARLCLTYDEPLSHLIYAGADFILV 1047 (1198)
Q Consensus 991 ~~qLVIvGsgpd-p~i~~~L~~la~eLgl~--------------~~drV~f~g~~d~~~l~~iyA~ADi~Lv 1047 (1198)
.-.++++|.+-. ....+.+++++++++.. ||..+-..|....+....++..||++|+
T Consensus 12 ~rP~il~G~g~~~~~a~~~l~~lae~~~~Pv~~t~~~kg~i~~~hp~~~G~~g~~~~~~~~~~l~~aDlvl~ 83 (137)
T PF00205_consen 12 KRPVILAGRGARRSGAAEELRELAEKLGIPVATTPMGKGVIPEDHPLFLGYLGLFGSPAANEALEQADLVLA 83 (137)
T ss_dssp SSEEEEE-HHHHHTTCHHHHHHHHHHHTSEEEEEGGGTTSSTTTSTTEEEESCGGSCHHHHHHHHHSSEEEE
T ss_pred CCEEEEEcCCcChhhHHHHHHHHHHHHCCCEEecCccccccCCCCchhcccCCccCCHHHHHHhcCCCEEEE
Confidence 335666666411 13456677777776542 4544444444456677888999999886
No 214
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=56.86 E-value=2.3e+02 Score=35.33 Aligned_cols=79 Identities=10% Similarity=-0.044 Sum_probs=44.7
Q ss_pred cEEEEccCChHHHHHHHHHccEEEEcCCCCCCc-HHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEE
Q 046057 1023 RARLCLTYDEPLSHLIYAGADFILVPSIFEPCG-LTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFS 1101 (1198)
Q Consensus 1023 rV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfG-Lt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~l 1101 (1198)
.+.+.++.++ ..+++...+..+=+ -|| .+.+||+.+|+|+|+-...+ |...+. .+.. ..-..|..
T Consensus 339 g~vv~~W~PQ---~~iL~h~~vg~Fit---H~G~nS~~Eal~~GVP~l~~P~~~--DQ~~na----~~~~--~~~g~gv~ 404 (481)
T PLN02992 339 GFVVPSWAPQ---AEILAHQAVGGFLT---HCGWSSTLESVVGGVPMIAWPLFA--EQNMNA----ALLS--DELGIAVR 404 (481)
T ss_pred CEEEeecCCH---HHHhCCcccCeeEe---cCchhHHHHHHHcCCCEEecCccc--hhHHHH----HHHH--HHhCeeEE
Confidence 4566566665 34666666533222 244 68999999999999965432 222111 0000 01145666
Q ss_pred EcC----CCHHHHHHHHh
Q 046057 1102 FDG----ADIAGVDYALN 1115 (1198)
Q Consensus 1102 f~~----~D~~~La~AL~ 1115 (1198)
++. -+.+++..+|.
T Consensus 405 ~~~~~~~~~~~~l~~av~ 422 (481)
T PLN02992 405 SDDPKEVISRSKIEALVR 422 (481)
T ss_pred ecCCCCcccHHHHHHHHH
Confidence 643 36678888877
No 215
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=56.60 E-value=2.8e+02 Score=34.32 Aligned_cols=111 Identities=7% Similarity=-0.008 Sum_probs=61.8
Q ss_pred HHHHhCCCCCCCcEEEEEecCC--CccCHHHHHHHHHHhhcCCcEEEEE-ecCCC------hhhHHH---HHHHHHHhCC
Q 046057 951 LQQKVGLRKSDLPLVGIITRLT--HQKGIHLIKHAIWRTLDRGGQVVLL-GSAPD------PRIQND---FVNLANELHS 1018 (1198)
Q Consensus 951 Lrq~lGL~~~d~plIg~VGRL~--~qKGidlIleAl~~ll~~~~qLVIv-Gsgpd------p~i~~~---L~~la~eLgl 1018 (1198)
+.+-|.-..+...++++.|.+. +.+-+..|..++..+ +.+|+.+ .+... ...... ...+.++.
T Consensus 251 ~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s---~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~-- 325 (455)
T PLN02152 251 YTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEG---KRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL-- 325 (455)
T ss_pred HHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHc---CCCeEEEEecCcccccccccccccccccchhHHHhc--
Confidence 4444443323456777778764 344566677777665 3356553 32100 000001 12232222
Q ss_pred CCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC
Q 046057 1019 SHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1019 ~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
+++..+.++.++ ..+++...+-++=+. +-..+.+||+.+|+|+|+-..
T Consensus 326 --~~~g~v~~W~PQ---~~iL~h~~vg~fvtH--~G~nS~~Ea~~~GvP~l~~P~ 373 (455)
T PLN02152 326 --EEVGMIVSWCSQ---IEVLRHRAVGCFVTH--CGWSSSLESLVLGVPVVAFPM 373 (455)
T ss_pred --cCCeEEEeeCCH---HHHhCCcccceEEee--CCcccHHHHHHcCCCEEeccc
Confidence 356666677765 357888886444443 223688999999999998544
No 216
>cd02858 Esterase_N_term Esterase N-terminal domain. Esterases catalyze the hydrolysis of organic esters to release an alcohol or thiol and acid. The term can be applied to enzymes that hydrolyze carboxylate, phosphate and sulphate esters, but is more often restricted to the first class of substrate. The N-terminus of esterase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=56.03 E-value=56 Score=30.74 Aligned_cols=56 Identities=9% Similarity=0.243 Sum_probs=34.3
Q ss_pred CCcEEEEEEeCCCCCCCCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEE-ecCCceEEEEEE
Q 046057 449 GEDLVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVS-VPDQALVLDWVF 517 (1198)
Q Consensus 449 aG~~V~v~YN~~~g~L~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~-VP~~A~~ldFvF 517 (1198)
++..|+...- - ..|++|.|.+.||+|. ...|.+. +.+||.+++. ++...|...|+.
T Consensus 4 ~~~~v~F~vw---A--P~A~~V~L~~~~~~~~-----~~~m~~~---~~G~W~~~v~~l~~g~Y~Y~~~v 60 (85)
T cd02858 4 ADRTVTFRLF---A--PKANEVQVRGSWGGAG-----SHPMTKD---EAGVWSVTTGPLAPGIYTYSFLV 60 (85)
T ss_pred CCCcEEEEEE---C--CCCCEEEEEeecCCCc-----cEeCeEC---CCeEEEEEECCCCCcEEEEEEEE
Confidence 3445666665 2 2689999999998775 2234332 2458999984 444335555554
No 217
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. This domain is found in a range of enzymes that act on branched substrates ie. isoamylase, pullulanase and branching enzyme. Isoamylase hydrolyses 1,6-alpha-D-glucosidic branch linkages in glycogen, amylopectin and dextrin; 1,4-alpha-glucan branching enzyme functions in the formation of 1,6-glucosidic linkages of glycogen; and pullulanase is a starch-debranching enzyme.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BHZ_A 2BY2_A 2BY3_A 2BXY_A 2BY1_A 2BHY_A 2BHU_A 2BXZ_A 2BY0_A 2FHB_A ....
Probab=54.77 E-value=25 Score=32.31 Aligned_cols=49 Identities=16% Similarity=0.325 Sum_probs=30.4
Q ss_pred CCCCceEEEEEeCC-CCCCccceeeeccccCCCCCeEEEEEE--ecCCceEEEEEEe
Q 046057 465 AHAKELWIHGGYNN-WKDGLSIVARLVSSERTDGDWWYAKVS--VPDQALVLDWVFA 518 (1198)
Q Consensus 465 ~ga~~I~lh~G~N~-W~~~~~~~~~l~~~~~~~g~ww~atV~--VP~~A~~ldFvFs 518 (1198)
.+|++|+|++.+|+ |... ...|.+ ...+++|.++|. ++.....-.|.+.
T Consensus 20 P~A~~V~l~~~~~~~~~~~---~~~m~~--~~~~G~w~~~~~~~~~~g~~~Y~y~i~ 71 (85)
T PF02922_consen 20 PNAKSVELVLYFNGSWPAE---EYPMTR--KDDDGVWEVTVPGDLPPGGYYYKYRID 71 (85)
T ss_dssp TTESEEEEEEETTTSSEEE---EEEEEE--ECTTTEEEEEEEGCGTTTT-EEEEEEE
T ss_pred CCCCEEEEEEEeeecCCCc---eEEeee--cCCCCEEEEEEcCCcCCCCEEEEEEEE
Confidence 47999999999998 6511 122322 344668999999 6643233444443
No 218
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=54.74 E-value=51 Score=31.97 Aligned_cols=38 Identities=29% Similarity=0.173 Sum_probs=24.2
Q ss_pred CCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCc
Q 046057 830 FHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLE 871 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~ 871 (1198)
.+.||||.|...+.+.--.+. +....+.+.|||-|++.
T Consensus 49 E~I~IVHgH~a~S~l~hE~i~----hA~~mGlktVfTDHSLf 86 (90)
T PF08288_consen 49 ERIDIVHGHQAFSTLCHEAIL----HARTMGLKTVFTDHSLF 86 (90)
T ss_pred cCeeEEEeehhhhHHHHHHHH----HHHhCCCcEEeeccccc
Confidence 489999999754443321111 11223899999999864
No 219
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=53.87 E-value=22 Score=35.73 Aligned_cols=46 Identities=15% Similarity=0.043 Sum_probs=32.4
Q ss_pred HHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccc
Q 046057 1035 SHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTV 1080 (1198)
Q Consensus 1035 l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V 1080 (1198)
+..++..+|++|--|..+..--.+-.|+.+|+|+|+.-||...+-+
T Consensus 61 l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~~ 106 (124)
T PF01113_consen 61 LEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSDEQI 106 (124)
T ss_dssp HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHHHHH
T ss_pred HHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCHHHH
Confidence 5678888999999886655555666789999999999888765544
No 220
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=53.43 E-value=44 Score=42.94 Aligned_cols=24 Identities=13% Similarity=0.054 Sum_probs=19.6
Q ss_pred hHHHHHHHHHHHHHHHhhcccCCC
Q 046057 239 KKEVEENLRKQEIERLADENFLRQ 262 (1198)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~g 262 (1198)
||..+|-..-+-|=+||-+++|.-
T Consensus 245 kL~~dEfilam~liema~sGq~lP 268 (1118)
T KOG1029|consen 245 KLSADEFILAMHLIEMAKSGQPLP 268 (1118)
T ss_pred cccHHHHHHHHHHHHHHhcCCCCC
Confidence 455577778888999999999987
No 221
>KOG4661 consensus Hsp27-ERE-TATA-binding protein/Scaffold attachment factor (SAF-B) [Transcription]
Probab=53.39 E-value=38 Score=41.97 Aligned_cols=17 Identities=41% Similarity=0.366 Sum_probs=11.9
Q ss_pred EcCCCCCCCCCceeEEe
Q 046057 619 YNPANTVLNGKSEIWFR 635 (1198)
Q Consensus 619 y~~~~~~~~~~~~~~~~ 635 (1198)
|-..+|+-.|.|+..=+
T Consensus 789 yp~~~~~hGGp~erHgr 805 (940)
T KOG4661|consen 789 YPLSGTVHGGPSERHGR 805 (940)
T ss_pred cCccCccCCCchhhccC
Confidence 66677777777766644
No 222
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=53.27 E-value=17 Score=36.05 Aligned_cols=28 Identities=21% Similarity=0.299 Sum_probs=21.1
Q ss_pred CCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 725 VGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 725 vGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
++|-=.=...|+++|+++||+|.+.++.
T Consensus 8 t~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred ChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 4454445678999999999999998864
No 223
>cd05808 CBM20_alpha_amylase Alpha-amylase, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. This domain is found in several bacterial and fungal alpha-amylases including the maltopentaose-forming amylases (G5-amylases). Most alpha-amylases have, in addition to the C-terminal CBM20 domain, an N-terminal catalytic domain belonging to glycosyl hydrolase family 13, which hydrolyzes internal alpha-1,4-glucosidic bonds in starch and related saccharides, yielding maltotriose and maltose. Two types of soluble substrates are used by alpha-amylases including long substrates (e.g. amylose) and short substrates (e.g. maltodextrins or maltooligosaccharides). The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. lafo
Probab=52.27 E-value=35 Score=32.23 Aligned_cols=59 Identities=17% Similarity=0.418 Sum_probs=33.2
Q ss_pred CcEEEEe---ecCCccccccceecccccCCCCeEEEEEEecCCc-eeEeEEEEc--CCcccccCCCCc
Q 046057 293 PDVLIMG---AFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEA-FKIDFVFFN--GQNIYENNDQKD 354 (1198)
Q Consensus 293 ~~v~ih~---GfN~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A-~~lnFvF~d--g~~~wDNN~g~d 354 (1198)
+.+.|-+ .+++|...+- ..|.... ++-|.+++.+|... .+.-|+..+ |.-.|++.....
T Consensus 15 e~l~v~G~~~~lG~W~~~~a-~~l~~~~--~~~W~~~v~l~~~~~~eYKy~~~~~~~~~~WE~~~nr~ 79 (95)
T cd05808 15 QNVYVVGNVPELGNWSPANA-VALSAAT--YPVWSGTVDLPAGTAIEYKYIKKDGSGTVTWESGPNRT 79 (95)
T ss_pred CEEEEEeCcHHhCCCChhhC-ccCCCCC--CCCEEEEEEeCCCCeEEEEEEEECCCCcEEEecCCCEE
Confidence 3455544 3677965432 3554433 34589999999764 444444433 344687765433
No 224
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=51.93 E-value=19 Score=40.62 Aligned_cols=69 Identities=20% Similarity=0.203 Sum_probs=49.3
Q ss_pred HHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCc---cccccccccccchhhhhccCCCCcEEEEcCCCHHHH
Q 046057 1034 LSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTG---GLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGV 1110 (1198)
Q Consensus 1034 ~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tG---Gl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~L 1110 (1198)
.....|+.|.++|+|.-.-++..-+.|||++|++||+-..+ ...|++ |. ..-.+.++..+...|
T Consensus 229 ~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~l-dw------------~~fsv~v~~~~~~~l 295 (302)
T PF03016_consen 229 EYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVL-DW------------SRFSVRVPEADLPEL 295 (302)
T ss_pred HHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCccccc-CH------------HHEEEEECHHHHHHH
Confidence 35688999999999988878899999999999999985331 111222 11 134677777777777
Q ss_pred HHHHh
Q 046057 1111 DYALN 1115 (1198)
Q Consensus 1111 a~AL~ 1115 (1198)
...|.
T Consensus 296 ~~iL~ 300 (302)
T PF03016_consen 296 PEILR 300 (302)
T ss_pred HHHHh
Confidence 76655
No 225
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. This domain is found in a range of enzymes that act on branched substrates ie. isoamylase, pullulanase and branching enzyme. Isoamylase hydrolyses 1,6-alpha-D-glucosidic branch linkages in glycogen, amylopectin and dextrin; 1,4-alpha-glucan branching enzyme functions in the formation of 1,6-glucosidic linkages of glycogen; and pullulanase is a starch-debranching enzyme.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BHZ_A 2BY2_A 2BY3_A 2BXY_A 2BY1_A 2BHY_A 2BHU_A 2BXZ_A 2BY0_A 2FHB_A ....
Probab=51.40 E-value=33 Score=31.52 Aligned_cols=50 Identities=16% Similarity=0.377 Sum_probs=33.0
Q ss_pred CCCCcEEEEeecCC-ccccccceecccccCCCCeEEEEEE--ecCCceeEeEEEEc
Q 046057 290 KNEPDVLIMGAFND-WRWKSFTFRLNKTHLKGDWWSCQVH--VPKEAFKIDFVFFN 342 (1198)
Q Consensus 290 ~~~~~v~ih~GfN~-W~~~~~~~~~~~t~~~~dWw~~~v~--VP~~A~~lnFvF~d 342 (1198)
.++..|.|+..+|+ |..... .|.+ ...+++|.++|. ++.....-.|.+..
T Consensus 20 P~A~~V~l~~~~~~~~~~~~~--~m~~-~~~~G~w~~~~~~~~~~g~~~Y~y~i~~ 72 (85)
T PF02922_consen 20 PNAKSVELVLYFNGSWPAEEY--PMTR-KDDDGVWEVTVPGDLPPGGYYYKYRIDG 72 (85)
T ss_dssp TTESEEEEEEETTTSSEEEEE--EEEE-ECTTTEEEEEEEGCGTTTT-EEEEEEEE
T ss_pred CCCCEEEEEEEeeecCCCceE--Eeee-cCCCCEEEEEEcCCcCCCCEEEEEEEEe
Confidence 57889999999998 654443 4443 334778999999 76543444555543
No 226
>cd05816 CBM20_DPE2_repeat2 Disproportionating enzyme 2 (DPE2), N-terminal CBM20 (carbohydrate-binding module, family 20) domain, repeat 2. DPE2 is a transglucosidase that is essential for the cytosolic metabolism of maltose in plant leaves at night. Maltose is an intermediate on the pathway from starch to sucrose and DPE2 is thought to metabolize the maltose that is exported from the chloroplast. DPE2 has two N-terminal CBM20 domains as well as a C-terminal amylomaltase (4-alpha-glucanotransferase) catalytic domain. DPE1, the plastid version of this enzyme, has a transglucosidase domain that is similar to that of DPE2 but lacks the N-terminal CBM20 domains. Included in this group are PDE2-like proteins from Dictyostelium, Entamoeba, and Bacteroides. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in star
Probab=50.34 E-value=52 Score=31.78 Aligned_cols=72 Identities=13% Similarity=0.415 Sum_probs=41.1
Q ss_pred CCCCCCceEEEEEe---CCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEE--ecCCCCCCccccCCCCcceE
Q 046057 463 SLAHAKELWIHGGY---NNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVF--ADGPPGKAIVYDNNSRQDFH 537 (1198)
Q Consensus 463 ~L~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvF--sD~~~~~~~~wDNN~g~dyh 537 (1198)
.|.-.+.|+|-|.. ++|...... .|. ..++..|.++|.+|.....+.|-| .+... +.-.|... .|-+
T Consensus 10 ~~~~Ge~v~i~Gs~~~LG~W~~~~a~--~l~---~~~~~~W~~~v~~p~~~~~ieYKyvi~~~~~-~~~~WE~g--~nr~ 81 (99)
T cd05816 10 YVPKGQSVYVTGSSPELGNWDPQKAL--KLS---DVGFPIWEADIDISKDSFPFEYKYIIANKDS-GVVSWENG--PNRE 81 (99)
T ss_pred ccCCCCEEEEEEChHHhCCCCccccc--cCC---CCCCCcEEEEEEeCCCCccEEEEEEEEeCCC-CcEEEEcC--CCeE
Confidence 45567788887765 689744432 332 223556999999997544455444 33210 23467664 4444
Q ss_pred EEecC
Q 046057 538 AIVPK 542 (1198)
Q Consensus 538 ~~V~~ 542 (1198)
+.++.
T Consensus 82 ~~~p~ 86 (99)
T cd05816 82 LSAPS 86 (99)
T ss_pred EECCc
Confidence 44543
No 227
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=50.21 E-value=45 Score=42.75 Aligned_cols=12 Identities=25% Similarity=0.545 Sum_probs=8.1
Q ss_pred CceeEEeccccc
Q 046057 629 KSEIWFRCSFNH 640 (1198)
Q Consensus 629 ~~~~~~~~~~~~ 640 (1198)
.+.-||++.|-|
T Consensus 1147 ~qqRyFri~F~~ 1158 (1259)
T KOG0163|consen 1147 AQQRYFRIPFMR 1158 (1259)
T ss_pred hhhheeecceec
Confidence 456677777766
No 228
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=49.79 E-value=1.2e+02 Score=34.81 Aligned_cols=92 Identities=12% Similarity=-0.004 Sum_probs=63.7
Q ss_pred CHHHHHHHHHHhhcCCcEEEEEecC-----------CChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccE
Q 046057 976 GIHLIKHAIWRTLDRGGQVVLLGSA-----------PDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADF 1044 (1198)
Q Consensus 976 GidlIleAl~~ll~~~~qLVIvGsg-----------pdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi 1044 (1198)
.-+.+++.+..+.+.+++++.-|+- +..+....|.+.++++|+. .+.-.++...+..+...+|+
T Consensus 27 s~e~~~~~a~~~~~~g~~~~r~g~~kpRts~~sf~G~G~~gl~~L~~~~~~~Gl~-----~~Tev~d~~~v~~~~e~vdi 101 (250)
T PRK13397 27 SYDHIRLAASSAKKLGYNYFRGGAYKPRTSAASFQGLGLQGIRYLHEVCQEFGLL-----SVSEIMSERQLEEAYDYLDV 101 (250)
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccCCCCCCcccCCCCHHHHHHHHHHHHHcCCC-----EEEeeCCHHHHHHHHhcCCE
Confidence 4455666666666668888877764 1122456788888898882 44556778888888888999
Q ss_pred EEEcCCCCCCcHHHHHHH-HhCCcEEEeCC
Q 046057 1045 ILVPSIFEPCGLTQLVAM-RYGSIPVVRKT 1073 (1198)
Q Consensus 1045 ~LvPS~~EpfGLt~LEAM-a~G~PvIvt~t 1073 (1198)
+=+||+ +..-..+|+++ ..|+||+.+.-
T Consensus 102 lqIgs~-~~~n~~LL~~va~tgkPVilk~G 130 (250)
T PRK13397 102 IQVGAR-NMQNFEFLKTLSHIDKPILFKRG 130 (250)
T ss_pred EEECcc-cccCHHHHHHHHccCCeEEEeCC
Confidence 999996 33335566665 57999998653
No 229
>PF07946 DUF1682: Protein of unknown function (DUF1682); InterPro: IPR012879 The members of this family are all hypothetical eukaryotic proteins of unknown function. One member (Q920S6 from SWISSPROT) is described as being an adipocyte-specific protein, but no evidence of this was found.
Probab=49.63 E-value=55 Score=38.47 Aligned_cols=27 Identities=41% Similarity=0.539 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046057 377 RREQEKLAKEKAEQERQEEERRRIEAE 403 (1198)
Q Consensus 377 r~~~e~la~e~aer~~~~~e~rr~~~~ 403 (1198)
|++.++....+++++|+++.+.+++++
T Consensus 264 R~~~~~~~~K~~~~~r~E~~~~~k~e~ 290 (321)
T PF07946_consen 264 REEEEEKILKEAHQERQEEAQEKKEEK 290 (321)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333334444444443333333
No 230
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=49.62 E-value=44 Score=42.26 Aligned_cols=115 Identities=17% Similarity=0.021 Sum_probs=72.5
Q ss_pred HHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEc
Q 046057 951 LQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCL 1028 (1198)
Q Consensus 951 Lrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g 1028 (1198)
.|..+||+ +|..++..+..|- |=-..+++....+++ ++-.|.++--. - -....|+..++++|++ |++|.|..
T Consensus 749 ~r~~y~Lp-~d~vvf~~FNqLy--KidP~~l~~W~~ILk~VPnS~LwllrfP-a-~ge~rf~ty~~~~Gl~-p~riifs~ 822 (966)
T KOG4626|consen 749 TRSQYGLP-EDAVVFCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFP-A-VGEQRFRTYAEQLGLE-PDRIIFSP 822 (966)
T ss_pred CCCCCCCC-CCeEEEeechhhh--cCCHHHHHHHHHHHHhCCcceeEEEecc-c-cchHHHHHHHHHhCCC-ccceeecc
Confidence 35668888 4665666555553 433334454444443 35455554321 1 1136788999999997 89999976
Q ss_pred cCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeC
Q 046057 1029 TYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRK 1072 (1198)
Q Consensus 1029 ~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~ 1072 (1198)
-...++=-.-+.-+||+|-+...-+ -.|-++.+..|+|+|+-.
T Consensus 823 va~k~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmp 865 (966)
T KOG4626|consen 823 VAAKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVTMP 865 (966)
T ss_pred ccchHHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceeecc
Confidence 4433333355778999997765432 146689999999999754
No 231
>KOG1144 consensus Translation initiation factor 5B (eIF-5B) [Translation, ribosomal structure and biogenesis]
Probab=49.41 E-value=41 Score=43.35 Aligned_cols=16 Identities=19% Similarity=0.414 Sum_probs=12.0
Q ss_pred hhHHHHHHHHHHhCCC
Q 046057 1004 RIQNDFVNLANELHSS 1019 (1198)
Q Consensus 1004 ~i~~~L~~la~eLgl~ 1019 (1198)
.+..+.+.+|.++|++
T Consensus 884 kv~~eA~e~Ad~~gVk 899 (1064)
T KOG1144|consen 884 KVEREARELADEMGVK 899 (1064)
T ss_pred EeeHHHHHHHHhhCce
Confidence 3567788899988863
No 232
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=49.38 E-value=2.8e+02 Score=33.45 Aligned_cols=125 Identities=18% Similarity=0.112 Sum_probs=84.4
Q ss_pred ecCCCccC---HHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEE
Q 046057 969 TRLTHQKG---IHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFI 1045 (1198)
Q Consensus 969 GRL~~qKG---idlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~ 1045 (1198)
-.+.--|. ..++++++.+....-++.+.+-..-+..-...|..++..|.+-...+..|.+.++-+.. +-...|++
T Consensus 197 PNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~~ke~~~F~~f~~~ldlvr~gkasfegR~~~p~f--la~~tD~V 274 (364)
T PF10933_consen 197 PNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYHLKEHPTFVNFANSLDLVRDGKASFEGRFDFPDF--LAQHTDAV 274 (364)
T ss_pred CCceEEeecCccHHHHHHHHHhChhhcceEEEecchhhhcCHHHHHHHHhhHHhhcCeeEEeeecChHHH--HHhCCCEE
Confidence 45555676 45778888777544567666665534334567889999888855789999999987552 33457988
Q ss_pred EEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1046 LVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1046 LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
|.--.--+.-..-.|||.-|=|.|- +.. .+. ..|+.++..|..+=+++|.
T Consensus 275 vSHqWeN~lNYlY~daLyggYPLVH-NS~----~l~---------------d~GYYY~~fD~~~G~r~L~ 324 (364)
T PF10933_consen 275 VSHQWENPLNYLYYDALYGGYPLVH-NSP----LLK---------------DVGYYYPDFDAFEGARQLL 324 (364)
T ss_pred EeccccchhhHHHHHHHhcCCCccc-Ccc----hhc---------------ccCcCCCCccHHHHHHHHH
Confidence 8544323455566889988876554 332 333 2489999999988777777
No 233
>PF00686 CBM_20: Starch binding domain; InterPro: IPR002044 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain binds to starch, and is found often at the C terminus of a variety of glycosyl hydrolases acting on polysaccharides more rapidly than on oligosaccharides. Reations include: the hydrolysis of terminal 1,4-linked alpha-D-glucose residues successively from non-reducing ends of the chains with release of beta-D-glucose, the degradation of starch to cyclodextrins by formation of a 1,4-alpha-D-glucosidic bond, and hydrolysis of 1,4-alpha-glucosidic linkages in polysaccharides to remove successive maltose units from the non-reducing ends of the chains.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1KUL_A 1ACZ_A 1AC0_A 1KUM_A 2Z0B_C 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A ....
Probab=48.97 E-value=73 Score=30.40 Aligned_cols=84 Identities=19% Similarity=0.375 Sum_probs=48.6
Q ss_pred EEEEEeCCCCCCCCCCceEEEEEeC---CCCCCccceeeeccccC-CCCCeEEEEEEecCCc-eEEEEEEecCCCCCCcc
Q 046057 453 VRLYYNKQSSSLAHAKELWIHGGYN---NWKDGLSIVARLVSSER-TDGDWWYAKVSVPDQA-LVLDWVFADGPPGKAIV 527 (1198)
Q Consensus 453 V~v~YN~~~g~L~ga~~I~lh~G~N---~W~~~~~~~~~l~~~~~-~~g~ww~atV~VP~~A-~~ldFvFsD~~~~~~~~ 527 (1198)
|.|.++- ...+...+.|+|-|... +|..... ..|..... .....|.++|.+|.+- ...-|+..|.. +...
T Consensus 2 v~V~F~v-~~~~~~ge~v~i~Gs~~~LG~W~~~~a--~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~i~~~~--g~~~ 76 (96)
T PF00686_consen 2 VSVTFRV-NYQTQPGESVYIVGSCPELGNWDPKKA--VPLQWNEGTENYPIWSATVDLPAGTPFEYKYVIKDAD--GNVI 76 (96)
T ss_dssp EEEEEEE-SE---TTEEEEEEESSGGGTTTSGGGS--BESEBESSSSTTTSEEEEEEEETTSEEEEEEEEEETT--SEEE
T ss_pred EEEEEEE-EeECCCCCEEEEEECcHHhCCCChHhc--cccccccCCCCCCeEEEEEECcCCCEEEEEEEEEeCC--CCEE
Confidence 5556654 23666788999999995 8985443 34443321 2235699999999853 34555555553 2346
Q ss_pred ccCCCCcceEEEecCC
Q 046057 528 YDNNSRQDFHAIVPKS 543 (1198)
Q Consensus 528 wDNN~g~dyh~~V~~~ 543 (1198)
|.. |.|-.+.++.+
T Consensus 77 WE~--g~nR~~~~~~~ 90 (96)
T PF00686_consen 77 WES--GENRVLTVPSS 90 (96)
T ss_dssp E-S--SSEEEEE--SS
T ss_pred ECC--CCCEEEECCCC
Confidence 766 67777766643
No 234
>PF02903 Alpha-amylase_N: Alpha amylase, N-terminal ig-like domain; InterPro: IPR004185 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1J0J_A 1J0H_A 1J0I_A 1J0K_A 1EA9_C 1SMA_A 1GVI_B 1WZK_B 1VFM_B 3A6O_A ....
Probab=48.71 E-value=42 Score=33.38 Aligned_cols=65 Identities=11% Similarity=0.175 Sum_probs=39.3
Q ss_pred CCCcEEEEEEeCCCCCCCCCCceEEEEEeC-CCCCCc-cceeeeccccC-CCCCeEEEEEEecCCceEEEEEE
Q 046057 448 KGEDLVRLYYNKQSSSLAHAKELWIHGGYN-NWKDGL-SIVARLVSSER-TDGDWWYAKVSVPDQALVLDWVF 517 (1198)
Q Consensus 448 ~aG~~V~v~YN~~~g~L~ga~~I~lh~G~N-~W~~~~-~~~~~l~~~~~-~~g~ww~atV~VP~~A~~ldFvF 517 (1198)
..+++|+|.-. +.-....+|+|++|=. .|.... -....|.+... +.-|||+|+|.+|.. .+.-+|
T Consensus 18 ~~~~~l~IRLR---t~k~Dv~~V~l~~~d~~~~~~~~~~~~~~M~k~~~~~~fDyye~~l~~~~~--r~~Y~F 85 (120)
T PF02903_consen 18 YDGDTLHIRLR---TAKNDVEKVFLVYGDPYEEEGKWTYKSVEMEKIASDELFDYYEATLKLPEK--RLRYYF 85 (120)
T ss_dssp ECTTEEEEEEE---EETTT-SEEEEEEEETTSETTCECEEEEEEEEEEEESSEEEEEEEEE-TTS--EEEEEE
T ss_pred cCCCEEEEEEE---ecCCCCCEEEEEECCCccccccceEEEEEeEEEEeCCCeEEEEEEEECCCC--eEEEEE
Confidence 47999999998 4445577999998874 341111 01223433333 334899999999986 344444
No 235
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=47.43 E-value=1.3e+02 Score=35.41 Aligned_cols=26 Identities=19% Similarity=0.473 Sum_probs=23.7
Q ss_pred cHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 727 GLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 727 Gl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|=++.+..|.+.|.++||.|-|+...
T Consensus 63 GKSTli~~L~~~l~~~G~rVaVlAVD 88 (323)
T COG1703 63 GKSTLIEALGRELRERGHRVAVLAVD 88 (323)
T ss_pred chHHHHHHHHHHHHHCCcEEEEEEEC
Confidence 66889999999999999999999865
No 236
>PLN02764 glycosyltransferase family protein
Probab=47.09 E-value=5.4e+02 Score=31.93 Aligned_cols=41 Identities=20% Similarity=0.261 Sum_probs=31.9
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCC
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKY 753 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y 753 (1198)
..++||++|. +. .-|--.-..+|++.|+.+|+.|+++++.+
T Consensus 3 ~~~~Hvvl~P-----~p-aqGHi~P~l~LAk~La~~g~~vT~~tt~~ 43 (453)
T PLN02764 3 GLKFHVLMYP-----WF-ATGHMTPFLFLANKLAEKGHTVTFLLPKK 43 (453)
T ss_pred CCCcEEEEEC-----Cc-ccccHHHHHHHHHHHHhCCCEEEEEeCcc
Confidence 3468999884 22 23666678899999999999999998764
No 237
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=46.19 E-value=68 Score=37.90 Aligned_cols=21 Identities=10% Similarity=0.107 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCeEEEEeeC
Q 046057 732 VTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 732 V~~LarAL~~~GH~V~VItP~ 752 (1198)
...|+++|+++||+|+++++.
T Consensus 12 ~l~lA~~L~~~Gh~V~~~~~~ 32 (392)
T TIGR01426 12 TLGVVEELVARGHRVTYATTE 32 (392)
T ss_pred cHHHHHHHHhCCCeEEEEeCH
Confidence 467999999999999999975
No 238
>cd05811 CBM20_glucoamylase Glucoamylase (glucan1,4-alpha-glucosidase), C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Glucoamylases are inverting, exo-acting starch hydrolases that hydrolyze starch and related polysaccharides by releasing the nonreducing end glucose. They are mainly active on alpha-1,4-glycosidic bonds but also have some activity towards 1,6-glycosidic bonds occurring in natural oligosaccharides. The ability of glucoamylases to cleave 1-6-glycosidic binds is called "debranching activity" and is of importance in industrial applications, where complete degradation of starch to glucose is needed. Most glucoamylases are multidomain proteins containing an N-terminal catalytic domain, a C-terminal CBM20 domain, and a highly O-glycosylated linker region that connects the two. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also
Probab=43.94 E-value=1.1e+02 Score=29.65 Aligned_cols=86 Identities=15% Similarity=0.416 Sum_probs=49.0
Q ss_pred cEEEEEEeCCCCCCCCCCceEEEEEe---CCCCCCccceeeecccc-CCCCCeEEEEEEecCCceEEEEEEecCCCCCCc
Q 046057 451 DLVRLYYNKQSSSLAHAKELWIHGGY---NNWKDGLSIVARLVSSE-RTDGDWWYAKVSVPDQALVLDWVFADGPPGKAI 526 (1198)
Q Consensus 451 ~~V~v~YN~~~g~L~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~-~~~g~ww~atV~VP~~A~~ldFvFsD~~~~~~~ 526 (1198)
+.|+|.++-.. ...-.++|+|-|.. ++|...... .|.... ..++.-|.+++.+|... .+.+-|.-....+..
T Consensus 5 ~~v~V~F~i~~-~t~~Ge~l~v~G~~~~LG~W~~~~a~--~m~~~~~t~~~~~W~~~v~lp~~~-~veYKy~~~~~~~~~ 80 (106)
T cd05811 5 TTVAVTFNERV-TTSYGENIKIVGSIPQLGNWDTSSAV--ALSASQYTSSNPLWSVTIPLPAGT-SFEYKFIRKESDGSV 80 (106)
T ss_pred CEEEEEEEEee-EcCCCCeEEEEeCcHHHCCCChhhCc--ccccccCccCCCcEEEEEEeCCCC-cEEEEEEEEcCCCcE
Confidence 45677776433 23456678887766 589744432 332221 22345599999999854 466666411111335
Q ss_pred cccCCCCcceEEEecC
Q 046057 527 VYDNNSRQDFHAIVPK 542 (1198)
Q Consensus 527 ~wDNN~g~dyh~~V~~ 542 (1198)
.|.+.. |.++.++.
T Consensus 81 ~WE~~~--nr~~~~~~ 94 (106)
T cd05811 81 TWESDP--NRSYTVPS 94 (106)
T ss_pred EEecCC--CeEEECCC
Confidence 787654 55566654
No 239
>PF00686 CBM_20: Starch binding domain; InterPro: IPR002044 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain binds to starch, and is found often at the C terminus of a variety of glycosyl hydrolases acting on polysaccharides more rapidly than on oligosaccharides. Reations include: the hydrolysis of terminal 1,4-linked alpha-D-glucose residues successively from non-reducing ends of the chains with release of beta-D-glucose, the degradation of starch to cyclodextrins by formation of a 1,4-alpha-D-glucosidic bond, and hydrolysis of 1,4-alpha-glucosidic linkages in polysaccharides to remove successive maltose units from the non-reducing ends of the chains.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1KUL_A 1ACZ_A 1AC0_A 1KUM_A 2Z0B_C 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A ....
Probab=43.02 E-value=1.3e+02 Score=28.58 Aligned_cols=71 Identities=21% Similarity=0.369 Sum_probs=41.5
Q ss_pred CCCCCcEEEEeecC---CccccccceecccccC--CCCeEEEEEEecCCc-eeEeEEEEcCC--cccccCCCCceEEEEc
Q 046057 289 LKNEPDVLIMGAFN---DWRWKSFTFRLNKTHL--KGDWWSCQVHVPKEA-FKIDFVFFNGQ--NIYENNDQKDFCIAVE 360 (1198)
Q Consensus 289 L~~~~~v~ih~GfN---~W~~~~~~~~~~~t~~--~~dWw~~~v~VP~~A-~~lnFvF~dg~--~~wDNN~g~d~~~~V~ 360 (1198)
+.-.+.|.|-+... +|....- ..|..+.. ....|.++|.+|..- .+.-|+..|.. -.|+. |.|-.+.+.
T Consensus 12 ~~~ge~v~i~Gs~~~LG~W~~~~a-~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~i~~~~g~~~WE~--g~nR~~~~~ 88 (96)
T PF00686_consen 12 TQPGESVYIVGSCPELGNWDPKKA-VPLQWNEGTENYPIWSATVDLPAGTPFEYKYVIKDADGNVIWES--GENRVLTVP 88 (96)
T ss_dssp --TTEEEEEEESSGGGTTTSGGGS-BESEBESSSSTTTSEEEEEEEETTSEEEEEEEEEETTSEEEE-S--SSEEEEE--
T ss_pred CCCCCEEEEEECcHHhCCCChHhc-cccccccCCCCCCeEEEEEECcCCCEEEEEEEEEeCCCCEEECC--CCCEEEECC
Confidence 34445555555552 5976554 56666542 356799999998853 56667776653 45766 677777666
Q ss_pred CC
Q 046057 361 GL 362 (1198)
Q Consensus 361 ~g 362 (1198)
.+
T Consensus 89 ~~ 90 (96)
T PF00686_consen 89 SS 90 (96)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 240
>KOG4722 consensus Zn-finger protein [General function prediction only]
Probab=42.84 E-value=92 Score=37.54 Aligned_cols=47 Identities=36% Similarity=0.375 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046057 375 EKRREQEKLAKEKAEQERQEEERRRIEAEHAAIEADRAQARVETERK 421 (1198)
Q Consensus 375 e~r~~~e~la~e~aer~~~~~e~rr~~~~~aa~~a~~a~A~~~~~~~ 421 (1198)
|.+.+-..++.|.|...+.+|.++..+++-||.-|++++|-.+...+
T Consensus 401 Ea~ienkq~~~EkARedaa~EkA~dkeEq~AA~TAaq~eA~EelQ~k 447 (672)
T KOG4722|consen 401 EACIENKQLADEKAREDAAEEKAADKEEQEAAATAAQAEAAEELQCK 447 (672)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555544433333344445555555555555554444443
No 241
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=42.08 E-value=7.1e+02 Score=30.74 Aligned_cols=125 Identities=14% Similarity=0.139 Sum_probs=65.1
Q ss_pred HHHHHHHHHhhcCCcEEEEEecCC----ChhhHHHHHHHHHHhCCCCCCcEEEEccC-C-hHHH---HHHHH--HccEEE
Q 046057 978 HLIKHAIWRTLDRGGQVVLLGSAP----DPRIQNDFVNLANELHSSHADRARLCLTY-D-EPLS---HLIYA--GADFIL 1046 (1198)
Q Consensus 978 dlIleAl~~ll~~~~qLVIvGsgp----dp~i~~~L~~la~eLgl~~~drV~f~g~~-d-~~~l---~~iyA--~ADi~L 1046 (1198)
.+..+++..+...+..+||+-.++ +......+..+...+ .|+.+.|+..- . ++.+ ..+.. ..+-+|
T Consensus 169 ~i~~~al~~~~~~~~DvVIIDTaGr~~~d~~l~~eL~~i~~~~---~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~giI 245 (428)
T TIGR00959 169 EIARRALEYAKENGFDVVIVDTAGRLQIDEELMEELAAIKEIL---NPDEILLVVDAMTGQDAVNTAKTFNERLGLTGVV 245 (428)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccccCHHHHHHHHHHHHhh---CCceEEEEEeccchHHHHHHHHHHHhhCCCCEEE
Confidence 444566666656677788887654 233344454444433 25666655432 1 1111 12221 233345
Q ss_pred EcCCCC---CCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1047 VPSIFE---PCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1047 vPS~~E---pfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
++ ..+ -.|..+--+...|+|+.-..+|--.+-+..++++... ..++..+|+.+|.+.+.
T Consensus 246 lT-KlD~~~~~G~~lsi~~~~~~PI~fi~~Ge~i~dl~~f~p~~~~---------~~iLg~gD~~~l~e~~~ 307 (428)
T TIGR00959 246 LT-KLDGDARGGAALSVRSVTGKPIKFIGVGEKIDDLEPFHPERMA---------SRILGMGDILSLVEKAQ 307 (428)
T ss_pred Ee-CccCcccccHHHHHHHHHCcCEEEEeCCCChhhCccCCHHHHH---------HHHhCCCChHHHHHHHH
Confidence 44 333 3677777778899999887777443444444333321 22334556666665444
No 242
>cd00917 PG-PI_TP The phosphatidylinositol/phosphatidylglycerol transfer protein (PG/PI-TP) has been shown to bind phosphatidylglycerol and phosphatidylinositol, but the biological significance of this is still obscure. These proteins belong to the ML domain family.
Probab=41.70 E-value=1.3e+02 Score=30.12 Aligned_cols=80 Identities=13% Similarity=0.212 Sum_probs=53.2
Q ss_pred cEEEecccCCCCCeEEEEEcccCC-CCCCCCcEEEEeecCCccccccceec----c----cccC--CCCeEEEEEEecC-
Q 046057 264 KIFVYPQVVKPDQDIEVFLNRSLS-TLKNEPDVLIMGAFNDWRWKSFTFRL----N----KTHL--KGDWWSCQVHVPK- 331 (1198)
Q Consensus 264 ~v~v~P~~~~aG~~v~v~yN~~l~-~L~~~~~v~ih~GfN~W~~~~~~~~~----~----~t~~--~~dWw~~~v~VP~- 331 (1198)
.|.+.|-+++.|.+++|...+..+ .+.+...+.+++.|.++........+ . +=.+ |..-+..++.||.
T Consensus 16 ~V~isP~p~~~G~~~ti~~~~~~~~~v~~g~~~~v~~~~~~i~~~~~~~DlC~~~~~~g~~CPi~~G~~~~~~~~~ip~~ 95 (122)
T cd00917 16 SVEISPNPPAAGQNLTIEASGSVGKEIEDGAYVVVEVKYGFIRLLSETYDLCDETKNVDLSCPIEPGDKFLTKLVDLPGE 95 (122)
T ss_pred EEEEECCCcCCCCcEEEEEEEEECcCcCCCCEEEEEEEECCEEeecccCCcccccccCCCcCCcCCCcEEEEEEeeCCCC
Confidence 478899999999999999999977 44444588888888776543211111 0 0011 2223666688764
Q ss_pred ---CceeEeEEEEcC
Q 046057 332 ---EAFKIDFVFFNG 343 (1198)
Q Consensus 332 ---~A~~lnFvF~dg 343 (1198)
..|.+.+.+.|.
T Consensus 96 ~P~g~y~v~~~l~d~ 110 (122)
T cd00917 96 IPPGKYTVSARAYTK 110 (122)
T ss_pred CCCceEEEEEEEECC
Confidence 358888888774
No 243
>PF12158 DUF3592: Protein of unknown function (DUF3592); InterPro: IPR021994 This family of proteins is functionally uncharacterised.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.
Probab=41.37 E-value=29 Score=35.07 Aligned_cols=26 Identities=38% Similarity=0.484 Sum_probs=19.3
Q ss_pred CCCCcCCCceEEEEEcCCCCCCCCCceeEEe
Q 046057 605 DPLDVQAGTTVTVFYNPANTVLNGKSEIWFR 635 (1198)
Q Consensus 605 ~~~~~~~g~~~~~~y~~~~~~~~~~~~~~~~ 635 (1198)
.+...+.|++|+|+|||+| +.+.++.
T Consensus 88 ~~~~~~~G~~V~V~Y~P~~-----P~~~~l~ 113 (148)
T PF12158_consen 88 YWPKYPIGDTVTVYYNPNN-----PEEARLE 113 (148)
T ss_pred CCccCCCcCEEEEEECCcC-----CCeEEEe
Confidence 3334779999999999998 4555554
No 244
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=40.77 E-value=1.3e+02 Score=40.90 Aligned_cols=12 Identities=8% Similarity=0.412 Sum_probs=5.5
Q ss_pred CcEEEEcCCCHH
Q 046057 1097 PNGFSFDGADIA 1108 (1198)
Q Consensus 1097 ~nG~lf~~~D~~ 1108 (1198)
.|++.....+.-
T Consensus 994 ~~~~~~~~~~~~ 1005 (1021)
T PTZ00266 994 ANSYTLQKRNMY 1005 (1021)
T ss_pred cccceeeccchH
Confidence 345555444433
No 245
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=40.61 E-value=46 Score=42.57 Aligned_cols=51 Identities=20% Similarity=0.451 Sum_probs=39.4
Q ss_pred CCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEE-ecCCceEEEEEEecCC
Q 046057 465 AHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVS-VPDQALVLDWVFADGP 521 (1198)
Q Consensus 465 ~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~-VP~~A~~ldFvFsD~~ 521 (1198)
+.|..|.++|.||+|. +.+|.+....+..||..+|. ++.. ..-.|++.|..
T Consensus 45 P~a~~V~vvgdfn~w~-----~~~~~~~~~~~~G~we~~vp~~~~G-~~Yky~l~~~~ 96 (628)
T COG0296 45 PNARRVSLVGDFNDWD-----GRRMPMRDRKESGIWELFVPGAPPG-TRYKYELIDPS 96 (628)
T ss_pred CCCCeEEEEeecCCcc-----ceecccccCCCCceEEEeccCCCCC-CeEEEEEeCCC
Confidence 3789999999999998 44444444445569999999 7875 68889998874
No 246
>PF10959 DUF2761: Protein of unknown function (DUF2761); InterPro: IPR024249 Members of this family of proteins are annotated as KleF [,]. Their function is known.
Probab=40.53 E-value=45 Score=31.37 Aligned_cols=64 Identities=19% Similarity=0.266 Sum_probs=37.3
Q ss_pred cCCCCcEEEecccCCCCCeEEEEEcccCCCCCC-CCcEEEE-----eecCCccccccceecccccCCCCeEEEEEEecCC
Q 046057 259 FLRQKKIFVYPQVVKPDQDIEVFLNRSLSTLKN-EPDVLIM-----GAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKE 332 (1198)
Q Consensus 259 ~~~g~~v~v~P~~~~aG~~v~v~yN~~l~~L~~-~~~v~ih-----~GfN~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~ 332 (1198)
||.| ||.|.. |..+.+.-.=+.|.|.| +|-.+-- ||-+-|+.+.- |+--..
T Consensus 2 ~~pg---fv~p~t---grvavlvr~ya~sdlngdapaywysaqseewgldpwrlveg-----------------vdph~~ 58 (95)
T PF10959_consen 2 YPPG---FVCPTT---GRVAVLVREYADSDLNGDAPAYWYSAQSEEWGLDPWRLVEG-----------------VDPHTQ 58 (95)
T ss_pred CCCc---cccCCC---CeEEEEehhhhccccCCCCcceeecccchhcCCChhhhhcc-----------------cCcccc
Confidence 4555 677744 65555544444466665 4444432 88888865543 111123
Q ss_pred ceeEeEEEEcCCc
Q 046057 333 AFKIDFVFFNGQN 345 (1198)
Q Consensus 333 A~~lnFvF~dg~~ 345 (1198)
...||+||-||..
T Consensus 59 g~s~dvcfa~g~~ 71 (95)
T PF10959_consen 59 GGSFDVCFADGST 71 (95)
T ss_pred CccEEEEecCCCc
Confidence 5679999999854
No 247
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=40.30 E-value=48 Score=33.70 Aligned_cols=40 Identities=13% Similarity=0.173 Sum_probs=31.7
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||+.|+...-+ .|-...++..+.+.+.+.|++|++|-+.
T Consensus 1 Mkilii~gS~r~---~~~t~~l~~~~~~~l~~~g~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGSPRK---NSNTRKLAEAVAEQLEEAGAEVEVIDLA 40 (152)
T ss_dssp -EEEEEESSSST---TSHHHHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEEECcCCC---CCHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 899999875543 5677888888999999999999999654
No 248
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=39.70 E-value=4.7e+02 Score=28.04 Aligned_cols=66 Identities=14% Similarity=0.150 Sum_probs=40.3
Q ss_pred CCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCc-----hhhhHHHHHHhccCEEEEeCHHHHHHH
Q 046057 830 FHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLE-----FGTHHIGKAMTYADKATTVSHTYSKEV 898 (1198)
Q Consensus 830 ~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~-----~~~~li~~~~~~AD~VitVS~~~a~el 898 (1198)
.+||+|.|+...++....++...+.-.++.++++|+.---.. ...+++. ..+|.+++--+..++..
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~aRv~~lSlTGklly---~~aD~f~VQW~~l~~~y 161 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESFARVKTLSLTGKLLY---PFADRFIVQWEELAEKY 161 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEeeeecCCCchHHHHHH---HhCCEEEEcCHHHHhHC
Confidence 379999999876655444444333223344778776543322 2233333 35999999888877665
No 249
>PF04696 Pinin_SDK_memA: pinin/SDK/memA/ protein conserved region; InterPro: IPR006786 This conserved region is located adjacent and C-terminal to a N-terminal pinin/SKD domain IPR006787 from INTERPRO. Members of this family have very varied localisations within the eukaryotic cell. Pinin is known to localise at the desmosomes and is implicated in anchoring intermediate filaments to the desmosomal plaque []. SDK2/3 is a dynamically localised nuclear protein thought to be involved in modulation of alternative pre-mRNA splicing []. MemA is a tumour marker preferentially expressed in human melanoma cell lines. A common feature of the members of this family is that they may all participate in regulating protein-protein interactions [].
Probab=39.65 E-value=2.1e+02 Score=29.48 Aligned_cols=20 Identities=35% Similarity=0.542 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 046057 374 EEKRREQEKLAKEKAEQERQ 393 (1198)
Q Consensus 374 ee~r~~~e~la~e~aer~~~ 393 (1198)
.++|.+++.-..+.+..++.
T Consensus 34 ~~rR~eie~rleek~~~e~e 53 (131)
T PF04696_consen 34 QKRRAEIEKRLEEKLKEEKE 53 (131)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 35666666555554444433
No 250
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=39.07 E-value=1.5e+02 Score=32.79 Aligned_cols=101 Identities=12% Similarity=0.034 Sum_probs=60.9
Q ss_pred cCHHHHHHHHHHhhc-CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccC-ChHHHHHHHHHccEEEEcCCCC
Q 046057 975 KGIHLIKHAIWRTLD-RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTY-DEPLSHLIYAGADFILVPSIFE 1052 (1198)
Q Consensus 975 KGidlIleAl~~ll~-~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~-d~~~l~~iyA~ADi~LvPS~~E 1052 (1198)
|=+..|..|+.-+.. .+..++++|.-+ ..+...++.|+..|..+ -.-+|+|+. .... ..-+.-=|++++..-.+
T Consensus 44 kT~~~L~~A~~~i~~i~~~~ILfVgtk~--~~~~~V~~~A~~~g~~~-v~~RWlgGtLTN~~-~~~~~~Pdlliv~dp~~ 119 (196)
T TIGR01012 44 KTDERLRVAAKFLVRIEPEDILVVSARI--YGQKPVLKFAKVTGARA-IAGRFTPGTFTNPM-QKAFREPEVVVVTDPRA 119 (196)
T ss_pred HHHHHHHHHHHHHHHhhCCeEEEEecCH--HHHHHHHHHHHHhCCce-ECCeeCCCCCCCcc-ccccCCCCEEEEECCcc
Confidence 444555555533321 167889999853 45667788888777643 233677763 3222 12244556666643321
Q ss_pred CCcHHHHHHHHhCCcEEE-eCCccccccc
Q 046057 1053 PCGLTQLVAMRYGSIPVV-RKTGGLYDTV 1080 (1198)
Q Consensus 1053 pfGLt~LEAMa~G~PvIv-t~tGGl~E~V 1080 (1198)
--.++.||...|+|+|+ .++..-++.|
T Consensus 120 -~~~Av~EA~~l~IP~Iai~DTn~dp~~v 147 (196)
T TIGR01012 120 -DHQALKEASEVGIPIVALCDTDNPLRYV 147 (196)
T ss_pred -ccHHHHHHHHcCCCEEEEeeCCCCCccC
Confidence 24788999999999998 5665555554
No 251
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=39.06 E-value=6.6e+02 Score=30.89 Aligned_cols=137 Identities=12% Similarity=0.133 Sum_probs=88.7
Q ss_pred EEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCCh----hhHHHHHHHHHHhCCCCCCcEEEEccC-----ChHHH
Q 046057 965 VGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDP----RIQNDFVNLANELHSSHADRARLCLTY-----DEPLS 1035 (1198)
Q Consensus 965 Ig~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp----~i~~~L~~la~eLgl~~~drV~f~g~~-----d~~~l 1035 (1198)
|=|.|+++.-+-+.+..+++.+..+.++.+||+-..... .+-+++.+..+.+ .|+.|.|+..- -+++.
T Consensus 157 iP~ygsyte~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai---~Pd~vi~VmDasiGQaae~Qa 233 (483)
T KOG0780|consen 157 VPFYGSYTEADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAI---KPDEIIFVMDASIGQAAEAQA 233 (483)
T ss_pred CeeEecccccchHHHHHHHHHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhc---CCCeEEEEEeccccHhHHHHH
Confidence 445678888899999999999999999999999754221 2233344444433 38999987642 34455
Q ss_pred HHHHHHccE--EEEcCC----CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHH
Q 046057 1036 HLIYAGADF--ILVPSI----FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAG 1109 (1198)
Q Consensus 1036 ~~iyA~ADi--~LvPS~----~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~ 1109 (1198)
..+=...|| ++++-+ --++.|+..+ +.++|+|---+|-.-|-++.+|+..- .+-++--+|.++
T Consensus 234 ~aFk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~F---------vsrlLGmGDi~g 302 (483)
T KOG0780|consen 234 RAFKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKPF---------VSRLLGMGDIEG 302 (483)
T ss_pred HHHHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHHH---------HHHHhccccHHH
Confidence 555566666 444433 1245566664 56889998888866666666655432 233445668888
Q ss_pred HHHHHh
Q 046057 1110 VDYALN 1115 (1198)
Q Consensus 1110 La~AL~ 1115 (1198)
|.+.++
T Consensus 303 lvek~~ 308 (483)
T KOG0780|consen 303 LVEKVQ 308 (483)
T ss_pred HHHHHH
Confidence 876666
No 252
>cd02857 CD_pullulan_degrading_enzymes_N_term CD and pullulan-degrading enzymes N-terminus domain. Members of this subgroup include: Cyclomaltodextrinase (CDase), maltogenic amylase, and neopullulanase all of which are capable of hydrolyzing all or two of the following three types of substrates: cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. The N-terminus of the CD and pullulan-degrading enzymes may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of
Probab=38.63 E-value=1.5e+02 Score=28.53 Aligned_cols=62 Identities=15% Similarity=0.198 Sum_probs=38.8
Q ss_pred cEEEEEEeCCCCCCCCCCceEEEEEeCCCCCCccceeeeccccC-CCCCeEEEEEEecCCceEEEEEEe
Q 046057 451 DLVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSER-TDGDWWYAKVSVPDQALVLDWVFA 518 (1198)
Q Consensus 451 ~~V~v~YN~~~g~L~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~-~~g~ww~atV~VP~~A~~ldFvFs 518 (1198)
++|+|.-. .......+|+|+.+-+.|..... ...|.+... +..+||.++|.++. ..+--.|.
T Consensus 16 ~~v~irlr---~~~~~v~~v~l~~~~~~~~~~~~-~~~M~~~~~~~~~~~~~~~i~~~~--~~~~Y~F~ 78 (116)
T cd02857 16 DTLHIRLR---TKKGDVAKVYLRYGDPYDKGEEE-EVPMRKDGSDELFDYWEATLPPPT--GRLRYYFE 78 (116)
T ss_pred CEEEEEEE---ecCCCccEEEEEEECCCCCCCce-EEEEEEeeeCCceeEEEEEEecCC--cEEEEEEE
Confidence 89999988 44345889999998765421221 233444333 33489999999875 45554443
No 253
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=38.27 E-value=2.1e+02 Score=31.16 Aligned_cols=92 Identities=15% Similarity=0.102 Sum_probs=54.1
Q ss_pred HHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccC-ChHH-HH----------------------HHHH
Q 046057 985 WRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTY-DEPL-SH----------------------LIYA 1040 (1198)
Q Consensus 985 ~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~-d~~~-l~----------------------~iyA 1040 (1198)
..+...+.+++++|..+ ......+..++..+..+ -.-+++++. .... .. ....
T Consensus 50 ~~i~~~~g~iLfV~t~~--~~~~~v~~~a~~~~~~~-i~~rw~~G~LTN~~~~~~~~~~~~~~~~~~~~k~~~g~~~~~~ 126 (193)
T cd01425 50 ANIAAKGGKILFVGTKP--QAQRAVKKFAERTGSFY-VNGRWLGGTLTNWKTIRKSIKRLKKLEKEKLEKNLGGIKDMFR 126 (193)
T ss_pred HHHHhCCCEEEEEECCH--HHHHHHHHHHHHcCCee-ecCeecCCcCCCHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 34444578889999853 44556666776655422 223566653 3211 11 1334
Q ss_pred HccEEEEcCCCCCCcHHHHHHHHhCCcEEE-eCCccccccc
Q 046057 1041 GADFILVPSIFEPCGLTQLVAMRYGSIPVV-RKTGGLYDTV 1080 (1198)
Q Consensus 1041 ~ADi~LvPS~~EpfGLt~LEAMa~G~PvIv-t~tGGl~E~V 1080 (1198)
-=|++++..-.+ -..++.||-..|+|+|+ .++...++.|
T Consensus 127 ~Pdlviv~~~~~-~~~ai~Ea~~l~IP~I~i~Dtn~~~~~i 166 (193)
T cd01425 127 LPDLVIVLDPRK-EHQAIREASKLGIPVIAIVDTNCDPDLI 166 (193)
T ss_pred CCCEEEEeCCcc-chHHHHHHHHcCCCEEEEecCCCCCccc
Confidence 567777765432 26788999999999998 4444333333
No 254
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=38.14 E-value=6.6e+02 Score=28.70 Aligned_cols=160 Identities=13% Similarity=0.002 Sum_probs=83.9
Q ss_pred CcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccC-ChHHHHHHH-
Q 046057 962 LPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTY-DEPLSHLIY- 1039 (1198)
Q Consensus 962 ~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~-d~~~l~~iy- 1039 (1198)
.+.+++++.=.+.|.++.++++++. ++.++.+.+.|......-....+.+++|++ +..+..- ..+.+..++
T Consensus 78 ~~~vl~v~~dsp~~t~~eli~~ak~---~p~~~~~g~~g~g~~~hl~~~~l~~~~G~~----~~~Vpy~G~~~~~~allg 150 (274)
T PF03401_consen 78 DPNVLVVRADSPYKTLEELIEYAKA---NPGKLTFGSSGPGSSDHLAAALLAKAAGIK----FTHVPYDGGAEALTALLG 150 (274)
T ss_dssp EEEEEEEETTSS-SSHHHHHHHHHC---SCCC-EEEESSTTSHHHHHHHHHHHHHT-------EEEE-SSHHHHHHHHHT
T ss_pred cceEEEEeCCCccccHHHHHHHHHh---CCCCeEEEecCCCchHHHHHHHHHHHhCCc----eEEEEeCCccHHHHHHhC
Confidence 3567888888889999999888754 233455544432211122345667778874 3332211 123333333
Q ss_pred HHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCC------CCcEEEEcCCCHHHHHHH
Q 046057 1040 AGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDL------EPNGFSFDGADIAGVDYA 1113 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~------~~nG~lf~~~D~~~La~A 1113 (1198)
-..|+.+... -..+.....|..-+..-.+.-+.-.. +|-....++|. ...|+.++.+-++++.+.
T Consensus 151 G~vd~~~~~~------~~~~~~~~~G~~k~Lav~~~~r~~~~---pdvPT~~E~G~~d~~~~~~~g~~~p~gtp~~~~~~ 221 (274)
T PF03401_consen 151 GHVDAAFGSP------GEALPYVEAGDLKPLAVFSDERSPAL---PDVPTFKEQGYPDIVFGSWRGLFAPKGTPDEIVDK 221 (274)
T ss_dssp TSSSEEEEEH------HHHHHHHHTTSEEEEEECSSS-BTTC---TTS-BTTTTT-TTG--EEEEEEEEETTS-HHHHHH
T ss_pred CeeeEEeecH------HHHHHHHhCCCceEEEEecCcccccc---CCCCCHHHhCccceeeeeeeeeecCCCCCHHHHHH
Confidence 4567765431 12344455666443322221111111 11111222222 135888899999999999
Q ss_pred HhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHH
Q 046057 1114 LNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVME 1177 (1198)
Q Consensus 1114 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~ 1177 (1198)
|. .++....+++++...+.+.++.
T Consensus 222 l~----------------------------------------~a~~~~~~~pe~~~~~~~~g~~ 245 (274)
T PF03401_consen 222 LA----------------------------------------DAIKKALEDPEFQEFLEKMGLE 245 (274)
T ss_dssp HH----------------------------------------HHHHHHHT-HHHHHHHHHHTEE
T ss_pred HH----------------------------------------HHHHHHhCCHHHHHHHHHCCCc
Confidence 88 9999999999998877777643
No 255
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=37.78 E-value=1.6e+02 Score=31.23 Aligned_cols=99 Identities=22% Similarity=0.270 Sum_probs=60.1
Q ss_pred cCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEcc----CChHHHHHHH-----HHccEE
Q 046057 975 KGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLT----YDEPLSHLIY-----AGADFI 1045 (1198)
Q Consensus 975 KGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~----~d~~~l~~iy-----A~ADi~ 1045 (1198)
-|.+++.+.+..+..++.++.++|+.+ +.++++++.|...|| .+.+.|. +++.+...+. +.+|++
T Consensus 32 ~g~dl~~~l~~~~~~~~~~ifllG~~~-----~~~~~~~~~l~~~yP-~l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv 105 (172)
T PF03808_consen 32 TGSDLFPDLLRRAEQRGKRIFLLGGSE-----EVLEKAAANLRRRYP-GLRIVGYHHGYFDEEEEEAIINRINASGPDIV 105 (172)
T ss_pred CHHHHHHHHHHHHHHcCCeEEEEeCCH-----HHHHHHHHHHHHHCC-CeEEEEecCCCCChhhHHHHHHHHHHcCCCEE
Confidence 588999888888877889999999863 444445555544555 3555543 3444444444 578888
Q ss_pred EEcCC---CCCCcHHHHHHHHhCCcEEEeCCccccccccc
Q 046057 1046 LVPSI---FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 1082 (1198)
Q Consensus 1046 LvPS~---~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d 1082 (1198)
++--- .|-| +.+-....-..|.-.+||.-|....
T Consensus 106 ~vglG~PkQE~~---~~~~~~~l~~~v~i~vG~~~d~~aG 142 (172)
T PF03808_consen 106 FVGLGAPKQERW---IARHRQRLPAGVIIGVGGAFDFLAG 142 (172)
T ss_pred EEECCCCHHHHH---HHHHHHHCCCCEEEEECchhhhhcc
Confidence 87432 2322 2233333333377778888887653
No 256
>PRK09510 tolA cell envelope integrity inner membrane protein TolA; Provisional
Probab=37.52 E-value=1.3e+02 Score=36.62 Aligned_cols=9 Identities=44% Similarity=0.700 Sum_probs=6.1
Q ss_pred HHHHHHHHH
Q 046057 816 FFCHAALEF 824 (1198)
Q Consensus 816 ~F~~aale~ 824 (1198)
-||.+++..
T Consensus 351 aldrAA~~A 359 (387)
T PRK09510 351 ALCQAALAA 359 (387)
T ss_pred HHHHHHHHH
Confidence 467777776
No 257
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=36.73 E-value=3.4e+02 Score=32.67 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=68.9
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCCh------------hhHHHHHHHHHHhCCCCCCcEEEEc
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDP------------RIQNDFVNLANELHSSHADRARLCL 1028 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp------------~i~~~L~~la~eLgl~~~drV~f~g 1028 (1198)
+.+++++.|. ..--.-+.+++.+..+.+.+++++--|.- +| .....|.+..+++|+. .+.-
T Consensus 99 ~~~l~vIAGP-CsIEs~eq~l~~A~~lk~~g~~~~r~g~~-kpRtsp~sf~G~g~~gl~~L~~~~~e~Gl~-----~~te 171 (352)
T PRK13396 99 NHPVVVVAGP-CSVENEEMIVETAKRVKAAGAKFLRGGAY-KPRTSPYAFQGHGESALELLAAAREATGLG-----IITE 171 (352)
T ss_pred CCeEEEEEeC-CcccCHHHHHHHHHHHHHcCCCEEEeeee-cCCCCCcccCCchHHHHHHHHHHHHHcCCc-----EEEe
Confidence 4456666663 22345667777777777778888776643 22 2345577777888872 4455
Q ss_pred cCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHH-HhCCcEEEeC
Q 046057 1029 TYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAM-RYGSIPVVRK 1072 (1198)
Q Consensus 1029 ~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAM-a~G~PvIvt~ 1072 (1198)
.++...+..+..-+|++-++|+. -.-+.+|+++ ..|+|++...
T Consensus 172 v~d~~~v~~~~~~~d~lqIga~~-~~n~~LL~~va~t~kPVllk~ 215 (352)
T PRK13396 172 VMDAADLEKIAEVADVIQVGARN-MQNFSLLKKVGAQDKPVLLKR 215 (352)
T ss_pred eCCHHHHHHHHhhCCeEEECccc-ccCHHHHHHHHccCCeEEEeC
Confidence 67777777777779999999973 2224445554 6799999854
No 258
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=36.10 E-value=96 Score=35.40 Aligned_cols=103 Identities=15% Similarity=0.036 Sum_probs=61.8
Q ss_pred CccCHHHHHHHHHHhh--cCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccC-ChHHHHHHHHHccEEEEcC
Q 046057 973 HQKGIHLIKHAIWRTL--DRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTY-DEPLSHLIYAGADFILVPS 1049 (1198)
Q Consensus 973 ~qKGidlIleAl~~ll--~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~-d~~~l~~iyA~ADi~LvPS 1049 (1198)
-.|=+..|..|+.-+. ..+..++++|+-+ ..+..+...+...|..+ -.=+|+++. ... ...-+.-=|++++..
T Consensus 51 L~kT~~~L~~Aa~~i~~i~~~~~Il~Vstr~--~~~~~V~k~A~~tg~~~-i~~Rw~pGtlTN~-~~~~f~~P~llIV~D 126 (249)
T PTZ00254 51 LAKTWEKLKLAARVIAAIENPADVVVVSSRP--YGQRAVLKFAQYTGASA-IAGRFTPGTFTNQ-IQKKFMEPRLLIVTD 126 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEEEEEcCH--HHHHHHHHHHHHhCCeE-ECCcccCCCCCCc-cccccCCCCEEEEeC
Confidence 3455555666654443 3466788888853 45677788888777542 223566653 332 222334455666643
Q ss_pred CCCCCcHHHHHHHHhCCcEEE-eCCccccccc
Q 046057 1050 IFEPCGLTQLVAMRYGSIPVV-RKTGGLYDTV 1080 (1198)
Q Consensus 1050 ~~EpfGLt~LEAMa~G~PvIv-t~tGGl~E~V 1080 (1198)
-. .--..+.||...|+|+|+ .++...++.|
T Consensus 127 p~-~d~qAI~EA~~lnIPvIal~DTds~p~~V 157 (249)
T PTZ00254 127 PR-TDHQAIREASYVNIPVIALCDTDSPLEYV 157 (249)
T ss_pred CC-cchHHHHHHHHhCCCEEEEecCCCCcccC
Confidence 21 223788999999999998 5555555554
No 259
>cd05810 CBM20_alpha_MTH Glucan 1,4-alpha-maltotetraohydrolase (alpha-MTH), C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Alpha-MTH, also known as maltotetraose-forming exo-amylase or G4-amylase, is an exo-amylase found in bacteria that degrades starch from its non-reducing end. Most alpha-MTHs have, in addition to the C-terminal CBM20 domain, an N-terminal glycosyl hydrolase family 13 catalytic domain. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognitio
Probab=35.86 E-value=1.3e+02 Score=29.21 Aligned_cols=54 Identities=15% Similarity=0.303 Sum_probs=30.7
Q ss_pred CCccccccceecccccCCCCeEEEEEEecCCc-eeEeEEEEcCCc-----ccccCCCCceEEE
Q 046057 302 NDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEA-FKIDFVFFNGQN-----IYENNDQKDFCIA 358 (1198)
Q Consensus 302 N~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A-~~lnFvF~dg~~-----~wDNN~g~d~~~~ 358 (1198)
.+|.-..- ..|... ..+.|.++|.+|..+ .+.-|+..|+.+ .|+....+.+.++
T Consensus 28 G~W~~~~a-~~l~~~--~~~~W~~~v~lp~~~~veyKyv~~~~~~~~~~v~WE~g~Nr~~~~p 87 (97)
T cd05810 28 GNWSPADA-VKLDPT--AYPTWSGSISLPASTNVEWKCLKRNETNPTAGVQWQGGGNNQLTTG 87 (97)
T ss_pred CCCChhhc-ccccCC--CCCeEEEEEEcCCCCeEEEEEEEEcCCCCcceEEEeeCCCEEEeCC
Confidence 35864332 344332 345699999999865 445566655532 6877554444433
No 260
>PF03714 PUD: Bacterial pullanase-associated domain; InterPro: IPR005323 Domain is found in pullanase - carbohydrate de-branching - proteins. It is found both to the N or the C-termini of of the alpha-amylase active site region. This domain contains several conserved aromatic residues that are suggestive of a carbohydrate binding function.; GO: 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process; PDB: 2J43_A 2J44_A 2YA1_A 2FHC_A 2FHB_A 2FHF_A 2J73_B 2J72_A 2J71_A.
Probab=35.73 E-value=1.5e+02 Score=28.92 Aligned_cols=74 Identities=16% Similarity=0.092 Sum_probs=45.6
Q ss_pred CeEEEEEcccCCCCCCCCcEEEE-ee--c--C-CccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcCCccccc
Q 046057 276 QDIEVFLNRSLSTLKNEPDVLIM-GA--F--N-DWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQNIYEN 349 (1198)
Q Consensus 276 ~~v~v~yN~~l~~L~~~~~v~ih-~G--f--N-~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg~~~wDN 349 (1198)
..|+|.|.|.-+ .-...-|| || . + +|. ..+.-++.....=.+.|.++..+..|+|+++++ +..
T Consensus 2 ~~v~vhY~r~d~---~Y~~w~lw~W~d~~~~~~~W~-----~~~~f~~~D~~G~~~~i~~~~~~~~igfIv~~~---~~k 70 (103)
T PF03714_consen 2 NTVRVHYHRPDG---DYDGWGLWLWGDGTGGSDDWP-----KPYPFTGTDDFGAYADIPLKGGASKIGFIVRKG---DWK 70 (103)
T ss_dssp TEEEEEEESTTS----GTTEEEEEEESBSS--BSTT-----EEECGSEEETTEEEEEEEBSTSSSEEEEEEEET---TEE
T ss_pred CEEEEEEECCCC---CCCceEEEEECCCCCCCcccc-----cccCcceeCCCceEEEEEeCCCCCEEEEEEEcC---CCC
Confidence 368999998653 34556666 42 2 1 253 111111111111466788889999999999998 334
Q ss_pred CCCCceEEEEc
Q 046057 350 NDQKDFCIAVE 360 (1198)
Q Consensus 350 N~g~d~~~~V~ 360 (1198)
+.+.|..+.+.
T Consensus 71 d~~~D~~i~~~ 81 (103)
T PF03714_consen 71 DQGGDRFIDLT 81 (103)
T ss_dssp CSSSEEEEETT
T ss_pred CCCCCEEEEec
Confidence 48899999883
No 261
>PRK00247 putative inner membrane protein translocase component YidC; Validated
Probab=35.69 E-value=1.7e+02 Score=35.91 Aligned_cols=8 Identities=13% Similarity=0.143 Sum_probs=3.1
Q ss_pred hhhhhhhh
Q 046057 43 FFFIEFAY 50 (1198)
Q Consensus 43 ~~~~~~~~ 50 (1198)
.|-.=..+
T Consensus 31 ~W~isIi~ 38 (429)
T PRK00247 31 AWFASLFG 38 (429)
T ss_pred cHHHHHHH
Confidence 35333333
No 262
>PLN02256 arogenate dehydrogenase
Probab=35.46 E-value=45 Score=38.85 Aligned_cols=54 Identities=19% Similarity=0.220 Sum_probs=40.9
Q ss_pred cCCCCCCccCCCccCCCCCCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 688 FDNKNGMDYHIPVFGGVVKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 688 ~d~~~~~~~h~~~~g~~~~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
.|.-..+||..+++-.......|+|++|. +|..-..++++|.+.|++|.++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~kI~IIG-----------~G~mG~slA~~L~~~G~~V~~~d~~ 68 (304)
T PLN02256 15 IDAAQPFDYESRLQEELEKSRKLKIGIVG-----------FGNFGQFLAKTFVKQGHTVLATSRS 68 (304)
T ss_pred ccccCCCChHhHHhHhhccCCCCEEEEEe-----------eCHHHHHHHHHHHhCCCEEEEEECc
Confidence 45555678888888777778889999983 3445557888898999998887654
No 263
>cd05809 CBM20_beta_amylase Beta-amylase, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Beta-amylase has, in addition to its C-terminal CBM20 domain, an N-terminal catalytic domain belonging to glycosyl hydrolase family 14, which hydrolyzes the alpha-1,4-glucosidic bonds of starch, yielding beta-maltose from the nonreducing end of the substrate. Beta-amylase is found in both plants and microorganisms, however the plant members lack a C-terminal CBM20 domain and are not included in this group. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1
Probab=35.42 E-value=1.1e+02 Score=29.55 Aligned_cols=63 Identities=19% Similarity=0.426 Sum_probs=32.7
Q ss_pred CcEEEEe---ecCCccccccceecccccCCCCeEEEEEEecCCc-eeEeEEEE--cC-CcccccCCCCceE
Q 046057 293 PDVLIMG---AFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEA-FKIDFVFF--NG-QNIYENNDQKDFC 356 (1198)
Q Consensus 293 ~~v~ih~---GfN~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A-~~lnFvF~--dg-~~~wDNN~g~d~~ 356 (1198)
+.++|-+ .+++|.-......+.... ...-|.+++++|... .+.-|+-. |+ .-.|++...+.+.
T Consensus 18 ~~v~v~Gs~~~LG~W~~~~~~~~~~~~~-~~~~W~~~~~lp~~~~veyKyv~~~~~~~~~~WE~g~nr~~~ 87 (99)
T cd05809 18 ETVYITGSRAELGNWDTKQYPIQLYYNS-HSNDWRGTVHLPAGRNIEFKAIKKSKDGTNKSWQGGQQSWYP 87 (99)
T ss_pred CEEEEEeChHHhCCCChhhhhhccccCC-CCCCEEEEEEecCCCcEEEEEEEEcCCCCeeEEecCCCeeEE
Confidence 4555543 356796443212222211 223499999999864 34444553 33 3558765444333
No 264
>KOG2357 consensus Uncharacterized conserved protein [Function unknown]
Probab=35.42 E-value=1e+02 Score=37.33 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=12.9
Q ss_pred EEEEEEecCCceeEeEEEE
Q 046057 323 WSCQVHVPKEAFKIDFVFF 341 (1198)
Q Consensus 323 w~~~v~VP~~A~~lnFvF~ 341 (1198)
|.. ..|+....|.|.|.
T Consensus 314 ~~t--~~P~~~~~~l~~fn 330 (440)
T KOG2357|consen 314 GET--KLPEAKRMLLFKFN 330 (440)
T ss_pred ccc--cCchhhhhheeccC
Confidence 444 67888888999984
No 265
>cd05810 CBM20_alpha_MTH Glucan 1,4-alpha-maltotetraohydrolase (alpha-MTH), C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Alpha-MTH, also known as maltotetraose-forming exo-amylase or G4-amylase, is an exo-amylase found in bacteria that degrades starch from its non-reducing end. Most alpha-MTHs have, in addition to the C-terminal CBM20 domain, an N-terminal glycosyl hydrolase family 13 catalytic domain. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognitio
Probab=34.29 E-value=1.5e+02 Score=28.60 Aligned_cols=72 Identities=13% Similarity=0.320 Sum_probs=39.8
Q ss_pred CCCCCceEEEEEe---CCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEE--ecCCC-CCCccccCCCCcceE
Q 046057 464 LAHAKELWIHGGY---NNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVF--ADGPP-GKAIVYDNNSRQDFH 537 (1198)
Q Consensus 464 L~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvF--sD~~~-~~~~~wDNN~g~dyh 537 (1198)
+.-.++|||-|.. .+|..... ..|.. . ...-|.++|.+|..+ .+.|-| .|+.. ...-.|.+ |.|.+
T Consensus 12 t~~Ge~l~v~Gs~~~LG~W~~~~a--~~l~~--~-~~~~W~~~v~lp~~~-~veyKyv~~~~~~~~~~v~WE~--g~Nr~ 83 (97)
T cd05810 12 TQLGQSVYVVGNVPQLGNWSPADA--VKLDP--T-AYPTWSGSISLPAST-NVEWKCLKRNETNPTAGVQWQG--GGNNQ 83 (97)
T ss_pred cCCCCeEEEEEChHHhCCCChhhc--ccccC--C-CCCeEEEEEEcCCCC-eEEEEEEEEcCCCCcceEEEee--CCCEE
Confidence 3445678887665 59974332 23322 1 335599999999874 444444 44421 11236765 45555
Q ss_pred EEecCC
Q 046057 538 AIVPKS 543 (1198)
Q Consensus 538 ~~V~~~ 543 (1198)
+.++.+
T Consensus 84 ~~~p~~ 89 (97)
T cd05810 84 LTTGNS 89 (97)
T ss_pred EeCCCC
Confidence 556543
No 266
>TIGR01380 glut_syn glutathione synthetase, prokaryotic. This model was built using glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions.
Probab=34.21 E-value=35 Score=39.69 Aligned_cols=40 Identities=18% Similarity=0.210 Sum_probs=32.0
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||+|+. -|+....--.+....|..+.+++||+|.++.|.
T Consensus 1 m~~~~~~---~~~~~~~~~~~st~~L~~aa~~rG~~v~~~~~~ 40 (312)
T TIGR01380 1 LKVAFQM---DPIESINIGKDTTFALMEEAQKRGHELFFYEPG 40 (312)
T ss_pred CeEEEEe---CCHHHCCCCcChHHHHHHHHHHcCCEEEEEehh
Confidence 8999986 455444444667888999999999999999986
No 267
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=34.11 E-value=52 Score=38.08 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=25.9
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
...|||++|. .|++| ..++..|++.||+|+++...
T Consensus 3 ~~~m~I~IiG--------~GaiG---~~lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGIIG--------TGAIG---GFYGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CcCcEEEEEC--------CCHHH---HHHHHHHHHCCCeEEEEEeC
Confidence 4569999883 45544 45667788899999999864
No 268
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=33.58 E-value=1.5e+02 Score=38.62 Aligned_cols=24 Identities=33% Similarity=0.350 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 046057 400 IEAEHAAIEADRAQARVETERKRE 423 (1198)
Q Consensus 400 ~~~~~aa~~a~~a~A~~~~~~~~~ 423 (1198)
+|+++....+.|..||.|.+|+|+
T Consensus 387 rEEerkkeie~rEaar~ElEkqRq 410 (1118)
T KOG1029|consen 387 REEERKKEIERREAAREELEKQRQ 410 (1118)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666677777777765
No 269
>cd02854 Glycogen_branching_enzyme_like_N_term Glycogen branching enzyme-like N-terminus domain. Glycogen branching enzyme (AKA 1,4 alpha glucan branching enzyme) catalyzes the formation of alpha-1,6 branch points in either glycogen or starch by cleavage of the alpha-1,4 glucosidic linkage yielding a non-reducing end oligosaccharide chain and subsequent attachment to the alpha-1,6 position. By increasing the number of non-reducing ends glycogen is more reactive to synthesis and digestion as well as being more soluble. The N-terminus of the glycogen branching enzyme-like proteins may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobi
Probab=32.79 E-value=79 Score=30.84 Aligned_cols=35 Identities=26% Similarity=0.597 Sum_probs=24.5
Q ss_pred CCCCcEEEEeecCCccccccceecccccCCCCeEEEEEE
Q 046057 290 KNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVH 328 (1198)
Q Consensus 290 ~~~~~v~ih~GfN~W~~~~~~~~~~~t~~~~dWw~~~v~ 328 (1198)
.++..|.|.+-||+|..... .|.+.. .+-|+++|.
T Consensus 14 P~A~~V~l~GdFn~W~~~~~--~m~k~~--~G~W~~~i~ 48 (99)
T cd02854 14 PNAEEVYLIGDFNNWDRNAH--PLKKDE--FGVWEITIP 48 (99)
T ss_pred CCCCEEEEEccCCCCCCcCc--ccEECC--CCEEEEEEC
Confidence 46789999999999955444 365543 344887765
No 270
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=32.40 E-value=2.5e+02 Score=26.13 Aligned_cols=106 Identities=15% Similarity=0.151 Sum_probs=58.4
Q ss_pred EEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCC-CCCcHHHHHHHHh---CCcEEE
Q 046057 995 VLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIF-EPCGLTQLVAMRY---GSIPVV 1070 (1198)
Q Consensus 995 VIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~-EpfGLt~LEAMa~---G~PvIv 1070 (1198)
+|+.+ ++.....++.+.+..+. ..+.......+..-..--...|++++-... ..-|+.+++.++. .+|+|+
T Consensus 2 livd~--~~~~~~~l~~~l~~~~~---~~v~~~~~~~~~~~~~~~~~~d~iiid~~~~~~~~~~~~~~i~~~~~~~~ii~ 76 (112)
T PF00072_consen 2 LIVDD--DPEIRELLEKLLERAGY---EEVTTASSGEEALELLKKHPPDLIIIDLELPDGDGLELLEQIRQINPSIPIIV 76 (112)
T ss_dssp EEEES--SHHHHHHHHHHHHHTTE---EEEEEESSHHHHHHHHHHSTESEEEEESSSSSSBHHHHHHHHHHHTTTSEEEE
T ss_pred EEEEC--CHHHHHHHHHHHHhCCC---CEEEEECCHHHHHHHhcccCceEEEEEeeeccccccccccccccccccccEEE
Confidence 34443 55566667777664432 134443333332222222356788876554 3466666666554 666665
Q ss_pred -eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1071 -RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1071 -t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
+..........- . .....|++..|.+++.|..+|+
T Consensus 77 ~t~~~~~~~~~~~--------~--~~g~~~~l~kp~~~~~l~~~i~ 112 (112)
T PF00072_consen 77 VTDEDDSDEVQEA--------L--RAGADDYLSKPFSPEELRAAIN 112 (112)
T ss_dssp EESSTSHHHHHHH--------H--HTTESEEEESSSSHHHHHHHHH
T ss_pred ecCCCCHHHHHHH--------H--HCCCCEEEECCCCHHHHHHhhC
Confidence 544332222211 1 1227899999999999988774
No 271
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=32.28 E-value=54 Score=35.98 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=26.0
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEee
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILP 751 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP 751 (1198)
|||++| ||.+.+-..|+..|.+.||+|.++..
T Consensus 1 MkI~II----------GG~G~mG~ala~~L~~~G~~V~v~~r 32 (219)
T TIGR01915 1 MKIAVL----------GGTGDQGKGLALRLAKAGNKIIIGSR 32 (219)
T ss_pred CEEEEE----------cCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence 788876 45677788899999999999988753
No 272
>PF02731 SKIP_SNW: SKIP/SNW domain; InterPro: IPR004015 SKIP (SKI-interacting protein) is an essential spliceosomal component and transcriptional coregulator, which may provide regulatory coupling of transcription initiation and splicing []. SKIP was identified in a yeast 2-hybrid screen, where it was shown to interact with both the cellular and viral forms of SKI through the highly conserved region on SKIP known as the SNW domain []. SKIP is now known to interact with a number of other proteins as well. SKIP potentiates the activity of important transcription factors, such as vitamin D receptor, CBF1 (RBP-Jkappa), Smad2/3, and MyoD. It works with Ski in overcoming pRb-mediated cell cycle arrest, and it is targeted by the viral transactivators EBNA2 and E7 []. This entry represents the SNW domain.; GO: 0000398 nuclear mRNA splicing, via spliceosome, 0005681 spliceosomal complex
Probab=32.21 E-value=1.5e+02 Score=31.61 Aligned_cols=14 Identities=14% Similarity=0.458 Sum_probs=11.1
Q ss_pred cccccCCCCceEEEEc
Q 046057 345 NIYENNDQKDFCIAVE 360 (1198)
Q Consensus 345 ~~wDNN~g~d~~~~V~ 360 (1198)
+||-|+.| |+++++
T Consensus 75 SNWKN~kG--ytIpLD 88 (158)
T PF02731_consen 75 SNWKNPKG--YTIPLD 88 (158)
T ss_pred ccccCCCC--CccCHH
Confidence 55999998 777766
No 273
>PRK05299 rpsB 30S ribosomal protein S2; Provisional
Probab=32.16 E-value=3.9e+02 Score=30.68 Aligned_cols=39 Identities=21% Similarity=0.031 Sum_probs=25.9
Q ss_pred HccEEEEcCCCCCCcHHHHHHHHhCCcEEE-eCCccccccc
Q 046057 1041 GADFILVPSIFEPCGLTQLVAMRYGSIPVV-RKTGGLYDTV 1080 (1198)
Q Consensus 1041 ~ADi~LvPS~~EpfGLt~LEAMa~G~PvIv-t~tGGl~E~V 1080 (1198)
--|++++..-... -.++.||...|+|+|+ -++..-++.|
T Consensus 157 ~Pd~iii~d~~~~-~~ai~Ea~kl~IPiIaivDTn~dp~~I 196 (258)
T PRK05299 157 LPDALFVVDPNKE-HIAVKEARKLGIPVVAIVDTNCDPDGV 196 (258)
T ss_pred CCCEEEEeCCCcc-HHHHHHHHHhCCCEEEEeeCCCCCccc
Confidence 3567666554322 2788999999999998 4554444444
No 274
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=31.87 E-value=48 Score=36.88 Aligned_cols=26 Identities=35% Similarity=0.466 Sum_probs=23.5
Q ss_pred cHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 727 GLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 727 Gl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|++++=..+++.|.+.||+|.+|-..
T Consensus 7 G~G~vG~~va~~L~~~g~~Vv~Id~d 32 (225)
T COG0569 7 GAGRVGRSVARELSEEGHNVVLIDRD 32 (225)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEEcC
Confidence 77999999999999999999999643
No 275
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=31.74 E-value=4.8e+02 Score=28.61 Aligned_cols=107 Identities=14% Similarity=0.089 Sum_probs=62.6
Q ss_pred EEEEecCCC--ccCHHHHHHHHHHhhcCCcEEEEEecCCC--hhhHHHHHHHHHHh-CCCCCCcEEEEccCChHHHHHHH
Q 046057 965 VGIITRLTH--QKGIHLIKHAIWRTLDRGGQVVLLGSAPD--PRIQNDFVNLANEL-HSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 965 Ig~VGRL~~--qKGidlIleAl~~ll~~~~qLVIvGsgpd--p~i~~~L~~la~eL-gl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
+++-|-... .-+.+.|.+.+..+.+.+.+++++..++. .++...+.+...++ |. .+..+..++.+.....+
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~----~~~~~~~~~~~~~~~~l 78 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLTKARPKVLFVPTASGDRDEYTARFYAAFESLRGV----EVSHLHLFDTEDPLDAL 78 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhccCCCeEEEECCCCCCHHHHHHHHHHHHhhccCc----EEEEEeccCcccHHHHH
Confidence 344444443 34566676776666556788999987754 23334455555566 54 23333333344456788
Q ss_pred HHccEEEEcCC--------CCCCcHH--HHHHHHhCCcEEEeCCcc
Q 046057 1040 AGADFILVPSI--------FEPCGLT--QLVAMRYGSIPVVRKTGG 1075 (1198)
Q Consensus 1040 A~ADi~LvPS~--------~EpfGLt--~LEAMa~G~PvIvt~tGG 1075 (1198)
..||++++|-= +...|+. +-++...|+|++....|-
T Consensus 79 ~~ad~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 79 LEADVIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred hcCCEEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 99999999851 1122322 233455699988877763
No 276
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=31.32 E-value=4.7e+02 Score=28.91 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=61.6
Q ss_pred EEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCC--hhhHHHHHHHHHHhCCCCCCcEEEEccC-----ChHHHH
Q 046057 964 LVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPD--PRIQNDFVNLANELHSSHADRARLCLTY-----DEPLSH 1036 (1198)
Q Consensus 964 lIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpd--p~i~~~L~~la~eLgl~~~drV~f~g~~-----d~~~l~ 1036 (1198)
++++-|...+.....++-+.+..+-..+.+++++..+.. ....+.+.+...++|. ..+.++.-. +.+.+.
T Consensus 2 l~~iGGg~~~~~~~~i~~~~~~~ag~~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~---~~v~~~~~~~~~~a~~~~~~ 78 (217)
T cd03145 2 LVLIGGAEDKYDNRAILQRFVARAGGAGARIVVIPAASEEPAEVGEEYRDVFERLGA---REVEVLVIDSREAANDPEVV 78 (217)
T ss_pred EEEEeCCCCCcCHHHHHHHHHHHcCCCCCcEEEEeCCCcChhHHHHHHHHHHHHcCC---ceeEEeccCChHHcCCHHHH
Confidence 344444443333344444444444335677777765421 2334456666677775 344444332 345567
Q ss_pred HHHHHccEEEEcCC--------CCCCcH--HHHHHHHhCCcEEEeCCcccc
Q 046057 1037 LIYAGADFILVPSI--------FEPCGL--TQLVAMRYGSIPVVRKTGGLY 1077 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~--------~EpfGL--t~LEAMa~G~PvIvt~tGGl~ 1077 (1198)
..+..||++++.-- +..-++ .+.++...|+|++.+..|...
T Consensus 79 ~~l~~ad~I~~~GG~~~~~~~~l~~t~l~~~l~~~~~~G~v~~G~SAGA~i 129 (217)
T cd03145 79 ARLRDADGIFFTGGDQLRITSALGGTPLLDALRKVYRGGVVIGGTSAGAAV 129 (217)
T ss_pred HHHHhCCEEEEeCCcHHHHHHHHcCChHHHHHHHHHHcCCEEEEccHHHHh
Confidence 78899999998532 222233 445567789888887766544
No 277
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=31.23 E-value=1.9e+02 Score=31.77 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=24.2
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCC--CeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLN--HNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~G--H~V~VItP~ 752 (1198)
|||+++++ |-+.....|..++++.+ ++|.++.+.
T Consensus 2 ~ki~vl~s---------g~gs~~~~ll~~~~~~~~~~~I~~vvs~ 37 (200)
T PRK05647 2 KRIVVLAS---------GNGSNLQAIIDACAAGQLPAEIVAVISD 37 (200)
T ss_pred ceEEEEEc---------CCChhHHHHHHHHHcCCCCcEEEEEEec
Confidence 79998873 44678888999998875 556655443
No 278
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=30.76 E-value=4.5e+02 Score=28.58 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=62.4
Q ss_pred ecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCC--hhhHHHHHHHHHHhCCCCCCcEEEEcc--CChHHHHHHHHHccE
Q 046057 969 TRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPD--PRIQNDFVNLANELHSSHADRARLCLT--YDEPLSHLIYAGADF 1044 (1198)
Q Consensus 969 GRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpd--p~i~~~L~~la~eLgl~~~drV~f~g~--~d~~~l~~iyA~ADi 1044 (1198)
|..........+.+.+......+.+++++..+.. ...-+.+.+..+++|.. .+.+... -+.+.....+..||+
T Consensus 7 G~~~~~~~~~~~~~~~~~~~~~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~---~~~~~~~~~~~~~~~~~~l~~ad~ 83 (210)
T cd03129 7 GGLDKAHARPILQDFLARAGGAGARVLFIPTASGDRDEYGEEYRAAFERLGVE---VVHLLLIDTANDPDVVARLLEADG 83 (210)
T ss_pred CCcCccChHHHHHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCc---eEEEeccCCCCCHHHHHHHhhCCE
Confidence 3333344455555555555445678888876542 23345566667777763 2323221 244667889999999
Q ss_pred EEEcCC--------CCCC-cH-HHHHHHHhCCcEEEeCCcccc
Q 046057 1045 ILVPSI--------FEPC-GL-TQLVAMRYGSIPVVRKTGGLY 1077 (1198)
Q Consensus 1045 ~LvPS~--------~Epf-GL-t~LEAMa~G~PvIvt~tGGl~ 1077 (1198)
++++-- +... .+ .+++..+.|+|++.+..|...
T Consensus 84 I~~~GG~~~~~~~~l~~t~~~~~i~~~~~~G~v~~G~SAGA~~ 126 (210)
T cd03129 84 IFVGGGNQLRLLSVLRETPLLDAILKRVARGVVIGGTSAGAAV 126 (210)
T ss_pred EEEcCCcHHHHHHHHHhCChHHHHHHHHHcCCeEEEcCHHHHH
Confidence 998641 2222 22 456777779888887766443
No 279
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=30.69 E-value=2.8e+02 Score=30.27 Aligned_cols=34 Identities=15% Similarity=0.276 Sum_probs=24.0
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCC--eEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNH--NVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH--~V~VItP~ 752 (1198)
|||+++++ |-+.....+..+++..++ +|.+|.+.
T Consensus 1 ~riail~s---------g~gs~~~~ll~~~~~~~l~~~I~~vi~~ 36 (190)
T TIGR00639 1 KRIVVLIS---------GNGSNLQAIIDACKEGKIPASVVLVISN 36 (190)
T ss_pred CeEEEEEc---------CCChhHHHHHHHHHcCCCCceEEEEEEC
Confidence 68888863 446788899999988776 44444443
No 280
>KOG2412 consensus Nuclear-export-signal (NES)-containing protein/polyadenylated-RNA export factor [RNA processing and modification]
Probab=30.59 E-value=1.4e+02 Score=37.35 Aligned_cols=18 Identities=33% Similarity=0.636 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 046057 376 KRREQEKLAKEKAEQERQ 393 (1198)
Q Consensus 376 ~r~~~e~la~e~aer~~~ 393 (1198)
.|+++++.++++|||.++
T Consensus 214 ~~~~~~e~kr~Eaerk~~ 231 (591)
T KOG2412|consen 214 ERKERSEEKREEAERKRR 231 (591)
T ss_pred HHHHHHHhhhhhhHHHHH
Confidence 344444555555555444
No 281
>PF07046 CRA_rpt: Cytoplasmic repetitive antigen (CRA) like repeat; InterPro: IPR009761 This family consists of several repeats of around 42 residues in length. These repeated sequences are found in multiple copies in Trypanosoma cruzi antigens, Q26907 from SWISSPROT contains 23 copies of this repeat [].
Probab=30.06 E-value=1.6e+02 Score=24.59 Aligned_cols=17 Identities=29% Similarity=0.419 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046057 389 EQERQEEERRRIEAEHA 405 (1198)
Q Consensus 389 er~~~~~e~rr~~~~~a 405 (1198)
++++.+|..+..+++|.
T Consensus 3 eK~kaaEa~k~aEaeKq 19 (42)
T PF07046_consen 3 EKRKAAEATKVAEAEKQ 19 (42)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 44444444454444443
No 282
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=29.87 E-value=1.6e+02 Score=31.82 Aligned_cols=99 Identities=16% Similarity=0.148 Sum_probs=55.3
Q ss_pred CHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCC-cE-EEEccCChHHHHHHH-----HHccEEEEc
Q 046057 976 GIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHAD-RA-RLCLTYDEPLSHLIY-----AGADFILVP 1048 (1198)
Q Consensus 976 GidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~d-rV-~f~g~~d~~~l~~iy-----A~ADi~LvP 1048 (1198)
|.+++.+.+.....++.++.++|+.| ..++..++.+...||. ++ ...+.+++++...+. +++|++++-
T Consensus 33 G~dl~~~l~~~~~~~~~~vfllG~~~-----~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~Vg 107 (177)
T TIGR00696 33 GPDLMEELCQRAGKEKLPIFLYGGKP-----DVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVG 107 (177)
T ss_pred hHHHHHHHHHHHHHcCCeEEEECCCH-----HHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEE
Confidence 89999999988877789999999864 3444444444444543 22 223455543322222 478888773
Q ss_pred ---CCCCCCcHHHHHHHHhCCcEEEeCCccccccccc
Q 046057 1049 ---SIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 1082 (1198)
Q Consensus 1049 ---S~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d 1082 (1198)
.+.|-|-.-. .-.... .|.-.+||.-|....
T Consensus 108 lG~PkQE~~~~~~--~~~~~~-~v~~gvGg~fd~~aG 141 (177)
T TIGR00696 108 LGCPKQEIWMRNH--RHLKPD-AVMIGVGGSFDVFSG 141 (177)
T ss_pred cCCcHhHHHHHHh--HHhCCC-cEEEEeceeeeeccc
Confidence 1233222111 112233 344448888887653
No 283
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=29.40 E-value=3.6e+02 Score=31.26 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=26.1
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYD 754 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~ 754 (1198)
||||+....-. .+.-+..|.++|.+.| +|.|+.|...
T Consensus 1 M~ILlTNDDGi-------~apGi~aL~~al~~~g-~V~VvAP~~e 37 (266)
T PRK13934 1 MKILVTNDDGV-------HSPGLRLLYEFVSPLG-EVDVVAPETP 37 (266)
T ss_pred CeEEEEcCCCC-------CCHHHHHHHHHHHhCC-cEEEEccCCC
Confidence 78887764322 1345677788888887 8999998744
No 284
>KOG2891 consensus Surface glycoprotein [General function prediction only]
Probab=29.01 E-value=1.7e+02 Score=33.70 Aligned_cols=28 Identities=36% Similarity=0.647 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046057 375 EKRREQEKLAKEKAEQERQEEERRRIEA 402 (1198)
Q Consensus 375 e~r~~~e~la~e~aer~~~~~e~rr~~~ 402 (1198)
++.+|+|..|.|+-.|++.+||+.|.++
T Consensus 331 qekqeleqmaeeekkr~eeaeerqraee 358 (445)
T KOG2891|consen 331 QEKQELEQMAEEEKKREEEAEERQRAEE 358 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 3445666666555555555555444443
No 285
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=28.64 E-value=2.7e+02 Score=31.81 Aligned_cols=102 Identities=11% Similarity=0.032 Sum_probs=61.9
Q ss_pred EEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEe-----------cCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChH
Q 046057 965 VGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLG-----------SAPDPRIQNDFVNLANELHSSHADRARLCLTYDEP 1033 (1198)
Q Consensus 965 Ig~VGRL~~qKGidlIleAl~~ll~~~~qLVIvG-----------sgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~ 1033 (1198)
+++.| -..-...+.+++.+..+.+-+.++...+ .|+.......|.+.++++|+. .+.-.++..
T Consensus 27 ~~IAG-pc~ie~~~~~~~~A~~lk~~~~k~~r~~~~KpRtsp~s~~g~g~~gl~~l~~~~~~~Gl~-----~~t~~~d~~ 100 (260)
T TIGR01361 27 IVIAG-PCSVESEEQIMETARFVKEAGAKILRGGAFKPRTSPYSFQGLGEEGLKLLRRAADEHGLP-----VVTEVMDPR 100 (260)
T ss_pred EEEEe-CCccCCHHHHHHHHHHHHHHHHHhccCceecCCCCCccccccHHHHHHHHHHHHHHhCCC-----EEEeeCChh
Confidence 33444 4334456666776666654444433221 111123345688889998873 445566777
Q ss_pred HHHHHHHHccEEEEcCCCCCCcHHHHHH-HHhCCcEEEeCC
Q 046057 1034 LSHLIYAGADFILVPSIFEPCGLTQLVA-MRYGSIPVVRKT 1073 (1198)
Q Consensus 1034 ~l~~iyA~ADi~LvPS~~EpfGLt~LEA-Ma~G~PvIvt~t 1073 (1198)
.+..+..-+|++-+||. +..-..+|++ ...|+|++++.-
T Consensus 101 ~~~~l~~~~d~lkI~s~-~~~n~~LL~~~a~~gkPVilk~G 140 (260)
T TIGR01361 101 DVEIVAEYADILQIGAR-NMQNFELLKEVGKQGKPVLLKRG 140 (260)
T ss_pred hHHHHHhhCCEEEECcc-cccCHHHHHHHhcCCCcEEEeCC
Confidence 77777778999999996 3334445554 456999998543
No 286
>KOG4680 consensus Uncharacterized conserved protein, contains ML domain [General function prediction only]
Probab=28.53 E-value=60 Score=33.81 Aligned_cols=75 Identities=13% Similarity=0.196 Sum_probs=49.2
Q ss_pred EEEecccCCCCCeEEEEEcccCC-CCCCCCcEEEEeecCCccccccceecccccC----CCCe-EEEEEE----ecCCce
Q 046057 265 IFVYPQVVKPDQDIEVFLNRSLS-TLKNEPDVLIMGAFNDWRWKSFTFRLNKTHL----KGDW-WSCQVH----VPKEAF 334 (1198)
Q Consensus 265 v~v~P~~~~aG~~v~v~yN~~l~-~L~~~~~v~ih~GfN~W~~~~~~~~~~~t~~----~~dW-w~~~v~----VP~~A~ 334 (1198)
|-..|-|+.+|+++|+--|++.+ .+++. .+.|..-|-+|+..+.|..+=..-. -|++ -+.++. +|+..|
T Consensus 43 Vni~PnP~a~Ge~aTf~i~~ntg~tIs~G-k~VIeV~y~gi~ihsethDLCdetsCPVepG~f~~~hsq~LPg~tPPG~Y 121 (153)
T KOG4680|consen 43 VNISPNPPARGENATFSISGNTGETISEG-KYVIEVSYGGIRIHSETHDLCDETSCPVEPGDFLVAHSQVLPGYTPPGSY 121 (153)
T ss_pred EecCCCCCCCCCccEEEEecccccEeeCC-eEEEEEEEeeEEEeeccccccccccCCcCcCceeeeeeEeccCcCCCceE
Confidence 77889999999999999999977 34443 3448888888988775544432211 2444 333443 466667
Q ss_pred eEeEEE
Q 046057 335 KIDFVF 340 (1198)
Q Consensus 335 ~lnFvF 340 (1198)
.+-+--
T Consensus 122 ~lkm~~ 127 (153)
T KOG4680|consen 122 VLKMTA 127 (153)
T ss_pred EEEEEe
Confidence 665543
No 287
>cd05820 CBM20_novamyl Novamyl (also known as acarviose transferase, ATase, maltogenic alpha-amylase, glucan 1,4-alpha-maltohydrolase, and AcbD), C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Novamyl has a five-domain structure similar to that of cyclodextrin glucanotransferase (CGTase). Novamyl has a substrate-binding surface with an open groove which can accommodate both cyclodextrins and linear substrates. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific reco
Probab=28.22 E-value=2e+02 Score=28.08 Aligned_cols=71 Identities=18% Similarity=0.409 Sum_probs=38.1
Q ss_pred CCCCceEEEEEe---CCCCCCcccee-eeccccCCCCCeEEEEEEecCCceEEEEEEecCCCCCCccccCCCCcceEEE
Q 046057 465 AHAKELWIHGGY---NNWKDGLSIVA-RLVSSERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAIVYDNNSRQDFHAI 539 (1198)
Q Consensus 465 ~ga~~I~lh~G~---N~W~~~~~~~~-~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~~~~~~~~wDNN~g~dyh~~ 539 (1198)
.-.++|||-|.- .+|.-..+... .|. . .. ...|.+++.+|..+ .+.|-|---...+...|.+...+.+.++
T Consensus 16 ~~Ge~l~vvGs~~~LG~W~~~~~~a~~~l~-~-~~-~~~W~~~~~lp~~~-~veyK~v~~~~~g~v~WE~g~Nr~~~~p 90 (103)
T cd05820 16 APGEFLYLTGSVPELGNWSTSTDQAVGPLL-C-PN-WPDWFVVASVPAGT-YIEFKFLKAPADGTGTWEGGSNHAYTTP 90 (103)
T ss_pred CCCCEEEEEECcHHhCCCChhccccccccc-c-CC-CCCEEEEEEcCCCC-cEEEEEEEECCCCCEEEEeCCCEeEECC
Confidence 345688887665 58974321111 222 1 11 22389999999875 5555552211113367876555555444
No 288
>PLN03086 PRLI-interacting factor K; Provisional
Probab=28.17 E-value=2.7e+02 Score=35.56 Aligned_cols=15 Identities=47% Similarity=0.782 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHH
Q 046057 377 RREQEKLAKEKAEQE 391 (1198)
Q Consensus 377 r~~~e~la~e~aer~ 391 (1198)
|+..+++++|+-+|+
T Consensus 6 ~~~~~~~~~~~~~~~ 20 (567)
T PLN03086 6 RRAREKLEREQRERK 20 (567)
T ss_pred HHHHHHHHHHHHHHH
Confidence 445555555554443
No 289
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=27.82 E-value=3.7e+02 Score=32.30 Aligned_cols=91 Identities=10% Similarity=0.018 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhhcCCcEEEEEecC-----------CChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEE
Q 046057 977 IHLIKHAIWRTLDRGGQVVLLGSA-----------PDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFI 1045 (1198)
Q Consensus 977 idlIleAl~~ll~~~~qLVIvGsg-----------pdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~ 1045 (1198)
-+.+++.+..+.+.+++++.-|.. +..+....|.+.++++|+. .+.-.++...+..+...+|++
T Consensus 131 ~~~~~~~A~~lk~~g~~~~r~~~~kpRtsp~~f~g~~~e~l~~L~~~~~~~Gl~-----~~t~v~d~~~~~~l~~~vd~l 205 (360)
T PRK12595 131 YEQVEAVAKALKAKGLKLLRGGAFKPRTSPYDFQGLGVEGLKILKQVADEYGLA-----VISEIVNPADVEVALDYVDVI 205 (360)
T ss_pred HHHHHHHHHHHHHcCCcEEEccccCCCCCCccccCCCHHHHHHHHHHHHHcCCC-----EEEeeCCHHHHHHHHHhCCeE
Confidence 445666666666667887776642 1122345788888998872 444566777777777779999
Q ss_pred EEcCCCCCCcHHHHHHH-HhCCcEEEeCC
Q 046057 1046 LVPSIFEPCGLTQLVAM-RYGSIPVVRKT 1073 (1198)
Q Consensus 1046 LvPS~~EpfGLt~LEAM-a~G~PvIvt~t 1073 (1198)
-+||. +-.-+.+|+++ ..|+|||.+.-
T Consensus 206 kI~s~-~~~n~~LL~~~a~~gkPVilk~G 233 (360)
T PRK12595 206 QIGAR-NMQNFELLKAAGRVNKPVLLKRG 233 (360)
T ss_pred EECcc-cccCHHHHHHHHccCCcEEEeCC
Confidence 99996 33334555554 56999998654
No 290
>PRK09271 flavodoxin; Provisional
Probab=27.75 E-value=94 Score=32.50 Aligned_cols=36 Identities=19% Similarity=0.363 Sum_probs=29.8
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEe
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIIL 750 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VIt 750 (1198)
|||++|-..+ .|-.+.++..++..|...|++|.+.-
T Consensus 1 mkv~IvY~S~-----tGnTe~~A~~ia~~l~~~g~~v~~~~ 36 (160)
T PRK09271 1 MRILLAYASL-----SGNTREVAREIEERCEEAGHEVDWVE 36 (160)
T ss_pred CeEEEEEEcC-----CchHHHHHHHHHHHHHhCCCeeEEEe
Confidence 7888775433 68999999999999999999987654
No 291
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=27.49 E-value=2.5e+02 Score=38.28 Aligned_cols=10 Identities=30% Similarity=0.468 Sum_probs=4.4
Q ss_pred ceeecCCcce
Q 046057 652 KMVPVKYSTH 661 (1198)
Q Consensus 652 ~~~~~~~~~~ 661 (1198)
+|.|...|||
T Consensus 651 ~~~~~~~~~~ 660 (1021)
T PTZ00266 651 RAPPPNQGTH 660 (1021)
T ss_pred cCCCCCCCCC
Confidence 3444444443
No 292
>PF03714 PUD: Bacterial pullanase-associated domain; InterPro: IPR005323 Domain is found in pullanase - carbohydrate de-branching - proteins. It is found both to the N or the C-termini of of the alpha-amylase active site region. This domain contains several conserved aromatic residues that are suggestive of a carbohydrate binding function.; GO: 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process; PDB: 2J43_A 2J44_A 2YA1_A 2FHC_A 2FHB_A 2FHF_A 2J73_B 2J72_A 2J71_A.
Probab=27.40 E-value=2.4e+02 Score=27.49 Aligned_cols=76 Identities=18% Similarity=0.323 Sum_probs=45.1
Q ss_pred cEEEEEEeCCCCCCCCCCceEEEEEeC----CCCCCccceeeeccccC-CCCCeEEEEEEecCCceEEEEEEecCCCCCC
Q 046057 451 DLVRLYYNKQSSSLAHAKELWIHGGYN----NWKDGLSIVARLVSSER-TDGDWWYAKVSVPDQALVLDWVFADGPPGKA 525 (1198)
Q Consensus 451 ~~V~v~YN~~~g~L~ga~~I~lh~G~N----~W~~~~~~~~~l~~~~~-~~g~ww~atV~VP~~A~~ldFvFsD~~~~~~ 525 (1198)
.+|+|+|.|..|--.+- .||+=+.-. +|. ..+..... ..| =.+.|.++..+..|+|+..++.
T Consensus 2 ~~v~vhY~r~d~~Y~~w-~lw~W~d~~~~~~~W~------~~~~f~~~D~~G--~~~~i~~~~~~~~igfIv~~~~---- 68 (103)
T PF03714_consen 2 NTVRVHYHRPDGDYDGW-GLWLWGDGTGGSDDWP------KPYPFTGTDDFG--AYADIPLKGGASKIGFIVRKGD---- 68 (103)
T ss_dssp TEEEEEEESTTS-GTTE-EEEEEESBSS--BSTT------EEECGSEEETTE--EEEEEEBSTSSSEEEEEEEETT----
T ss_pred CEEEEEEECCCCCCCce-EEEEECCCCCCCcccc------cccCcceeCCCc--eEEEEEeCCCCCEEEEEEEcCC----
Confidence 47999999766553321 344411111 243 12222221 223 5667888888889999999972
Q ss_pred ccccCCCCcceEEEecC
Q 046057 526 IVYDNNSRQDFHAIVPK 542 (1198)
Q Consensus 526 ~~wDNN~g~dyh~~V~~ 542 (1198)
.-| .+.|..+.+..
T Consensus 69 -~kd--~~~D~~i~~~~ 82 (103)
T PF03714_consen 69 -WKD--QGGDRFIDLTS 82 (103)
T ss_dssp -EEC--SSSEEEEETTT
T ss_pred -CCC--CCCCEEEEecc
Confidence 223 88999999843
No 293
>cd05815 CBM20_DPE2_repeat1 Disproportionating enzyme 2 (DPE2), N-terminal CBM20 (carbohydrate-binding module, family 20) domain, repeat 1. DPE2 is a transglucosidase that is essential for the cytosolic metabolism of maltose in plant leaves at night. Maltose is an intermediate on the pathway from starch to sucrose and DPE2 is thought to metabolize the maltose that is exported from the chloroplast. DPE2 has two N-terminal CBM20 starch binding domains as well as a C-terminal amylomaltase (4-alpha-glucanotransferase) catalytic domain. DPE1, the plastid version of this enzyme, has a transglucosidase domain that is similar to that of DPE2 but lacks the N-terminal carbohydrate-binding domains. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabol
Probab=27.24 E-value=2.3e+02 Score=27.29 Aligned_cols=61 Identities=21% Similarity=0.279 Sum_probs=34.4
Q ss_pred EEecccCCCCCeEEEEEcccCCCCCCCCcEEEEeecCCccccccceecccccC-CCCeEEEEEEecCCc-eeEeEEEE
Q 046057 266 FVYPQVVKPDQDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHL-KGDWWSCQVHVPKEA-FKIDFVFF 341 (1198)
Q Consensus 266 ~v~P~~~~aG~~v~v~yN~~l~~L~~~~~v~ih~GfN~W~~~~~~~~~~~t~~-~~dWw~~~v~VP~~A-~~lnFvF~ 341 (1198)
|-.+.....|+.+.| .++...|++ |...+- ..|..+.. .+..|.++|.+|... .+.-|+..
T Consensus 4 f~i~~~t~~Ge~l~v--~G~~~~LG~------------W~~~~a-~~m~~~~~~~~~~W~~~v~~~~~~~veYky~v~ 66 (101)
T cd05815 4 FKLPYYTQWGQSLLI--CGSDPLLGS------------WNVKKG-LLLKPSHQGDVLVWSGSISVPPGFSSEYNYYVV 66 (101)
T ss_pred EEEEEEccCCCEEEE--EcChHHcCC------------cChHhc-EeeeecCCCCCCEEEEEEEeCCCCcEEEEEEEE
Confidence 344455566775544 555444444 865443 45543221 234799999998853 45555553
No 294
>KOG2412 consensus Nuclear-export-signal (NES)-containing protein/polyadenylated-RNA export factor [RNA processing and modification]
Probab=26.92 E-value=1.6e+02 Score=36.83 Aligned_cols=17 Identities=35% Similarity=0.419 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046057 372 LLEEKRREQEKLAKEKA 388 (1198)
Q Consensus 372 ~~ee~r~~~e~la~e~a 388 (1198)
+.|++|.|.|+-++++.
T Consensus 218 ~~e~kr~Eaerk~~~~q 234 (591)
T KOG2412|consen 218 RSEEKREEAERKRRAHQ 234 (591)
T ss_pred HHHhhhhhhHHHHHHHH
Confidence 46677777765544433
No 295
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=26.87 E-value=1.8e+02 Score=32.67 Aligned_cols=80 Identities=19% Similarity=0.188 Sum_probs=51.2
Q ss_pred cCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHH---hC
Q 046057 989 DRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMR---YG 1065 (1198)
Q Consensus 989 ~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa---~G 1065 (1198)
+.+.++|++=.. .+-+....+...++++. +.+.|..+-+.+++-.-|.++|++|+-...|.|.--++-+.. .|
T Consensus 67 ~TgGR~vCIvp~--~~~~~~~~~~l~~~~~~--~~vEfvvg~~~e~~~~~~~~iDF~vVDc~~~d~~~~vl~~~~~~~~G 142 (218)
T PF07279_consen 67 QTGGRHVCIVPD--EQSLSEYKKALGEAGLS--DVVEFVVGEAPEEVMPGLKGIDFVVVDCKREDFAARVLRAAKLSPRG 142 (218)
T ss_pred hcCCeEEEEcCC--hhhHHHHHHHHhhcccc--ccceEEecCCHHHHHhhccCCCEEEEeCCchhHHHHHHHHhccCCCc
Confidence 348888888653 33334455555556663 556766554455555668999999999999988834444443 46
Q ss_pred CcEEEeC
Q 046057 1066 SIPVVRK 1072 (1198)
Q Consensus 1066 ~PvIvt~ 1072 (1198)
.++|+.+
T Consensus 143 aVVV~~N 149 (218)
T PF07279_consen 143 AVVVCYN 149 (218)
T ss_pred eEEEEec
Confidence 6666644
No 296
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=26.83 E-value=3.4e+02 Score=35.43 Aligned_cols=15 Identities=40% Similarity=0.343 Sum_probs=6.3
Q ss_pred cchhhhhhhhhcchh
Q 046057 40 QFCFFFIEFAYLLIF 54 (1198)
Q Consensus 40 ~~~~~~~~~~~~~~~ 54 (1198)
|.|-=.+|--..||+
T Consensus 513 qDcIeL~E~K~~Gif 527 (1259)
T KOG0163|consen 513 QDCIELIEAKSNGIF 527 (1259)
T ss_pred hhHHHHHHHhccchh
Confidence 334334444444443
No 297
>cd05817 CBM20_DSP Dual-specificity phosphatase (DSP), N-terminal CBM20 (carbohydrate-binding module, family 20) domain. This CBM20 domain is located at the N-terminus of a protein tyrosine phosphatase of unknown function found in slime molds and ciliated protozoans. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognition of appropriate regions of starch.
Probab=26.80 E-value=5.2e+02 Score=24.94 Aligned_cols=68 Identities=15% Similarity=0.481 Sum_probs=37.8
Q ss_pred CCCCceEEEEEe---CCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEe--cCCCCCCccccCCCCcceEEE
Q 046057 465 AHAKELWIHGGY---NNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFA--DGPPGKAIVYDNNSRQDFHAI 539 (1198)
Q Consensus 465 ~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFs--D~~~~~~~~wDNN~g~dyh~~ 539 (1198)
.-.+.|+|-|.. ++|...... .| ...+++.|.++|.+|.. ..+.+-|. +...++...|.. |.|-.+.
T Consensus 11 ~~Ge~l~v~Gs~~~LG~W~~~~a~--~m---~~~~~~~W~~~v~lp~~-~~veYKY~i~~~~~~~~~~WE~--g~nr~~~ 82 (100)
T cd05817 11 QFGEAVYISGNCNQLGNWNPSKAK--RM---QWNEGDLWTVDVGIPES-VYIEYKYFVSNYDDPNTVLWES--GPNRVLR 82 (100)
T ss_pred CCCCEEEEEeCcHHHCCCCccccC--cc---cCCCCCCEEEEEEECCC-CcEEEEEEEEecCCCCCeEecC--CCCEEEE
Confidence 345678887765 689743322 22 22335569999999974 34555443 222122356755 3555555
Q ss_pred e
Q 046057 540 V 540 (1198)
Q Consensus 540 V 540 (1198)
+
T Consensus 83 ~ 83 (100)
T cd05817 83 T 83 (100)
T ss_pred e
Confidence 5
No 298
>cd05817 CBM20_DSP Dual-specificity phosphatase (DSP), N-terminal CBM20 (carbohydrate-binding module, family 20) domain. This CBM20 domain is located at the N-terminus of a protein tyrosine phosphatase of unknown function found in slime molds and ciliated protozoans. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognition of appropriate regions of starch.
Probab=26.68 E-value=2.1e+02 Score=27.68 Aligned_cols=77 Identities=16% Similarity=0.338 Sum_probs=42.7
Q ss_pred EEecccCCCCCeEEEEEcccCCCCCCCCcEEEEeecCCccccccceecccccCCCCeEEEEEEecCCc-eeEeEEEEc--
Q 046057 266 FVYPQVVKPDQDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEA-FKIDFVFFN-- 342 (1198)
Q Consensus 266 ~v~P~~~~aG~~v~v~yN~~l~~L~~~~~v~ih~GfN~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A-~~lnFvF~d-- 342 (1198)
|..+.+..+|+.+.| .++...|++ |....- ..|..+. ++.|.+++.+|... .+.-|+-.+
T Consensus 4 F~i~~~t~~Ge~l~v--~Gs~~~LG~------------W~~~~a-~~m~~~~--~~~W~~~v~lp~~~~veYKY~i~~~~ 66 (100)
T cd05817 4 FKIHYPTQFGEAVYI--SGNCNQLGN------------WNPSKA-KRMQWNE--GDLWTVDVGIPESVYIEYKYFVSNYD 66 (100)
T ss_pred EEEEEEcCCCCEEEE--EeCcHHHCC------------CCcccc-CcccCCC--CCCEEEEEEECCCCcEEEEEEEEecC
Confidence 444455677875544 555444444 754332 3444333 45699999999742 444444432
Q ss_pred --CCcccccCCCCceEEEEcC
Q 046057 343 --GQNIYENNDQKDFCIAVEG 361 (1198)
Q Consensus 343 --g~~~wDNN~g~d~~~~V~~ 361 (1198)
+.-.|+. |.|-.+.+..
T Consensus 67 ~~~~~~WE~--g~nr~~~~~~ 85 (100)
T cd05817 67 DPNTVLWES--GPNRVLRTNH 85 (100)
T ss_pred CCCCeEecC--CCCEEEEeCc
Confidence 2445755 4666666643
No 299
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=26.55 E-value=4.9e+02 Score=28.17 Aligned_cols=85 Identities=12% Similarity=0.069 Sum_probs=41.6
Q ss_pred HHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCch--------hhhHHHHHHhccCEEEEeCH
Q 046057 821 ALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEF--------GTHHIGKAMTYADKATTVSH 892 (1198)
Q Consensus 821 ale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~--------~~~li~~~~~~AD~VitVS~ 892 (1198)
+.+++.. .+||++..-.. -+-|.++.... ..++|+++.-=-+.. ...+++..+...|.+.+.|+
T Consensus 87 ~~rfl~~--~~P~~~i~~Et--ElWPnll~~a~----~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs~ 158 (186)
T PF04413_consen 87 VRRFLDH--WRPDLLIWVET--ELWPNLLREAK----RRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQSE 158 (186)
T ss_dssp HHHHHHH--H--SEEEEES------HHHHHH---------S-EEEEEE--------------HHHHHHGGG-SEEEESSH
T ss_pred HHHHHHH--hCCCEEEEEcc--ccCHHHHHHHh----hcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEECCH
Confidence 4445554 37998777542 22233333221 127888776543321 13467778889999999999
Q ss_pred HHHHHHhCCCCCCCCCCcEEEEeC
Q 046057 893 TYSKEVAGDPAIAPHLHKFYGILN 916 (1198)
Q Consensus 893 ~~a~el~~~~~l~~~~~K~~vI~N 916 (1198)
..++.+.. ++....++.+.-|
T Consensus 159 ~da~r~~~---lG~~~~~v~v~Gn 179 (186)
T PF04413_consen 159 ADAERFRK---LGAPPERVHVTGN 179 (186)
T ss_dssp HHHHHHHT---TT-S--SEEE---
T ss_pred HHHHHHHH---cCCCcceEEEeCc
Confidence 99999974 4556667776543
No 300
>cd02854 Glycogen_branching_enzyme_like_N_term Glycogen branching enzyme-like N-terminus domain. Glycogen branching enzyme (AKA 1,4 alpha glucan branching enzyme) catalyzes the formation of alpha-1,6 branch points in either glycogen or starch by cleavage of the alpha-1,4 glucosidic linkage yielding a non-reducing end oligosaccharide chain and subsequent attachment to the alpha-1,6 position. By increasing the number of non-reducing ends glycogen is more reactive to synthesis and digestion as well as being more soluble. The N-terminus of the glycogen branching enzyme-like proteins may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobi
Probab=26.55 E-value=1.1e+02 Score=29.91 Aligned_cols=35 Identities=26% Similarity=0.602 Sum_probs=22.3
Q ss_pred CCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEE
Q 046057 465 AHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVS 505 (1198)
Q Consensus 465 ~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~ 505 (1198)
..|.+|+|-|-||+|.... ..|.+. ..| -|+++|.
T Consensus 14 P~A~~V~l~GdFn~W~~~~---~~m~k~--~~G-~W~~~i~ 48 (99)
T cd02854 14 PNAEEVYLIGDFNNWDRNA---HPLKKD--EFG-VWEITIP 48 (99)
T ss_pred CCCCEEEEEccCCCCCCcC---cccEEC--CCC-EEEEEEC
Confidence 4799999999999996322 124333 234 3666654
No 301
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=26.44 E-value=5.7e+02 Score=30.46 Aligned_cols=38 Identities=18% Similarity=0.086 Sum_probs=24.5
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHhCCcEEE-eCCccccccc
Q 046057 1042 ADFILVPSIFEPCGLTQLVAMRYGSIPVV-RKTGGLYDTV 1080 (1198)
Q Consensus 1042 ADi~LvPS~~EpfGLt~LEAMa~G~PvIv-t~tGGl~E~V 1080 (1198)
=|++++..-. .--.++.||...|+|+|+ -++..-++.|
T Consensus 153 Pd~viv~d~~-~e~~AI~EA~kl~IPvIaivDTn~dp~~I 191 (326)
T PRK12311 153 PDLLFVIDTN-KEDIAIQEAQRLGIPVAAIVDTNCDPDGI 191 (326)
T ss_pred CCEEEEeCCc-cchHHHHHHHHcCCCEEEEeeCCCCcccc
Confidence 4555554332 225788999999999998 4444444444
No 302
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=25.80 E-value=28 Score=35.57 Aligned_cols=36 Identities=28% Similarity=0.392 Sum_probs=26.3
Q ss_pred CCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 706 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 706 ~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
..+.|||.+| |.|++-+.|+++|.+.||.|.-+..+
T Consensus 7 ~~~~l~I~iI-----------GaGrVG~~La~aL~~ag~~v~~v~sr 42 (127)
T PF10727_consen 7 QAARLKIGII-----------GAGRVGTALARALARAGHEVVGVYSR 42 (127)
T ss_dssp -----EEEEE-----------CTSCCCCHHHHHHHHTTSEEEEESSC
T ss_pred CCCccEEEEE-----------CCCHHHHHHHHHHHHCCCeEEEEEeC
Confidence 3457999999 45667789999999999999888644
No 303
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=25.45 E-value=4.1e+02 Score=28.27 Aligned_cols=98 Identities=20% Similarity=0.246 Sum_probs=55.9
Q ss_pred cCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEc----cCChHHH---HHHH--HHccEE
Q 046057 975 KGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCL----TYDEPLS---HLIY--AGADFI 1045 (1198)
Q Consensus 975 KGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g----~~d~~~l---~~iy--A~ADi~ 1045 (1198)
-|.+++.+.+..+.+++.++.++|+.+ +.+..+++.+...|| ++.+.+ .+..... ...+ ..+|++
T Consensus 30 ~g~dl~~~ll~~~~~~~~~v~llG~~~-----~~~~~~~~~l~~~yp-~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv 103 (171)
T cd06533 30 TGSDLMPALLELAAQKGLRVFLLGAKP-----EVLEKAAERLRARYP-GLKIVGYHHGYFGPEEEEEIIERINASGADIL 103 (171)
T ss_pred CcHHHHHHHHHHHHHcCCeEEEECCCH-----HHHHHHHHHHHHHCC-CcEEEEecCCCCChhhHHHHHHHHHHcCCCEE
Confidence 489999999988877789999999863 344444444444445 344444 3332221 1222 467888
Q ss_pred EEcC---CCCCCcHHHHHHHHhCCcEEEeCCcccccccc
Q 046057 1046 LVPS---IFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVF 1081 (1198)
Q Consensus 1046 LvPS---~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~ 1081 (1198)
++-- ..|-|..-....+ -..|.-.+||.-|...
T Consensus 104 ~vglG~PkQE~~~~~~~~~l---~~~v~~~vG~~~d~~a 139 (171)
T cd06533 104 FVGLGAPKQELWIARHKDRL---PVPVAIGVGGSFDFLA 139 (171)
T ss_pred EEECCCCHHHHHHHHHHHHC---CCCEEEEeceeeEecc
Confidence 7742 2343333333333 2344445788777654
No 304
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=25.08 E-value=2.9e+02 Score=31.17 Aligned_cols=88 Identities=18% Similarity=0.140 Sum_probs=60.3
Q ss_pred CcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCCh-HHHHHHHH
Q 046057 962 LPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDE-PLSHLIYA 1040 (1198)
Q Consensus 962 ~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~-~~l~~iyA 1040 (1198)
.|++.+..+-+..+.++.+.+++..+. +.-|+.|.---......++++|+++|+. -+..+-+.|+ +++..++.
T Consensus 60 i~l~~~~~~g~~e~eve~L~~~l~~l~---~d~iv~GaI~s~yqk~rve~lc~~lGl~---~~~PLWg~d~~ell~e~~~ 133 (223)
T COG2102 60 IPLVTFDTSGEEEREVEELKEALRRLK---VDGIVAGAIASEYQKERVERLCEELGLK---VYAPLWGRDPEELLEEMVE 133 (223)
T ss_pred CceEEEecCccchhhHHHHHHHHHhCc---ccEEEEchhhhHHHHHHHHHHHHHhCCE---EeecccCCCHHHHHHHHHH
Confidence 346766777788899999999999984 6778888753333455789999999984 2333334454 45555554
Q ss_pred H-ccEEEEcCCCCCCc
Q 046057 1041 G-ADFILVPSIFEPCG 1055 (1198)
Q Consensus 1041 ~-ADi~LvPS~~EpfG 1055 (1198)
. -+++|+-.--++.+
T Consensus 134 ~Gf~~~Iv~Vsa~gL~ 149 (223)
T COG2102 134 AGFEAIIVAVSAEGLD 149 (223)
T ss_pred cCCeEEEEEEeccCCC
Confidence 4 78887766655555
No 305
>cd05467 CBM20 The family 20 carbohydrate-binding module (CBM20), also known as the starch-binding domain, is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognition of appropriate regions of starch.
Probab=25.05 E-value=2.3e+02 Score=26.50 Aligned_cols=67 Identities=15% Similarity=0.419 Sum_probs=37.2
Q ss_pred CCCCceEEEEEe---CCCCCCccceeeeccccCCCCCeEEEEEEecC--CceEEEEEEecCCCCCCccccCCCCcce
Q 046057 465 AHAKELWIHGGY---NNWKDGLSIVARLVSSERTDGDWWYAKVSVPD--QALVLDWVFADGPPGKAIVYDNNSRQDF 536 (1198)
Q Consensus 465 ~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~--~A~~ldFvFsD~~~~~~~~wDNN~g~dy 536 (1198)
.-.+.|+|-|.. .+|....+. .|.... .+.-|.++|.+|. + ..+.|-|.-...++...|.....+.+
T Consensus 11 ~~Ge~l~v~G~~~~LG~W~~~~a~--~m~~~~--~~~~W~~~v~~~~~~~-~~~~yKy~~~~~~~~~~wE~~~~r~~ 82 (96)
T cd05467 11 QFGQSVYVVGSHPELGNWDPAKAL--RLNTSN--SYPLWTGEIPLPAPEG-QVIEYKYVIVDDDGNVQWESGSNRVL 82 (96)
T ss_pred CCCCEEEEEeCcHHhCCcChhcCc--cccCCC--CCCcEEEEEEecCCCC-CeEEEEEEEECCCCCEEeccCCCeEE
Confidence 345678887766 589754432 332222 2455999999998 4 24554442211123456877654433
No 306
>PRK05246 glutathione synthetase; Provisional
Probab=24.89 E-value=61 Score=37.67 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=32.1
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||+||. .|+....-..+....|+.+.+++||+|.++.|.
T Consensus 2 ~~~~~~~---~~~~~~~~~~~st~~l~~aa~~~G~~v~~~~~~ 41 (316)
T PRK05246 2 MKVAFQM---DPIESINIKKDSTFAMMLEAQRRGHELFYYEPD 41 (316)
T ss_pred ceEEEEe---CCHHHCCCCCChHHHHHHHHHHcCCEEEEEehh
Confidence 8999996 455445555566778999999999999999986
No 307
>cd05807 CBM20_CGTase CGTase, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. CGTase, also known as cyclodextrin glycosyltransferase and cyclodextrin glucanotransferase, catalyzes the formation of various cyclodextrins (alpha-1,4-glucans) from starch. CGTase has, in addition to its C-terminal CBM20 domain, an N-terminal catalytic domain belonging to glycosyl hydrolase family 13 and an IPT domain of unknown function. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific
Probab=24.77 E-value=2.5e+02 Score=27.14 Aligned_cols=36 Identities=17% Similarity=0.412 Sum_probs=22.1
Q ss_pred CeEEEEEEecCCc-eeEeEEEE--cCCcccccCCCCceE
Q 046057 321 DWWSCQVHVPKEA-FKIDFVFF--NGQNIYENNDQKDFC 356 (1198)
Q Consensus 321 dWw~~~v~VP~~A-~~lnFvF~--dg~~~wDNN~g~d~~ 356 (1198)
..|.+++++|... .+.-|+-. |+.-.|++...+.+.
T Consensus 50 ~~W~~~~~lp~~~~~eyK~~~~~~~~~~~WE~g~nr~~~ 88 (101)
T cd05807 50 PNWYYDVSVPAGTTIEFKFIKKNGDNTVTWESGSNHTYT 88 (101)
T ss_pred CcEEEEEEcCCCCcEEEEEEEECCCCCEEEEeCCCEEEe
Confidence 3499999999875 33344443 356678775444333
No 308
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=24.73 E-value=1e+02 Score=35.55 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=28.5
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
..|||++| |+|.+-..+++.|.+.||+|.++...
T Consensus 3 ~~m~I~ii-----------G~G~~G~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 3 QPKTIAIL-----------GAGAWGSTLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCEEEEE-----------CccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999988 66778889999999999999887643
No 309
>COG1995 PdxA Pyridoxal phosphate biosynthesis protein [Coenzyme metabolism]
Probab=24.52 E-value=4.2e+02 Score=31.60 Aligned_cols=138 Identities=27% Similarity=0.308 Sum_probs=83.0
Q ss_pred CcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccC---------HHHHHHHHHHhhcCCcEEEEEecCCC
Q 046057 932 PVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKG---------IHLIKHAIWRTLDRGGQVVLLGSAPD 1002 (1198)
Q Consensus 932 p~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKG---------idlIleAl~~ll~~~~qLVIvGsgpd 1002 (1198)
|...+.+.+.+--......|++++|+. .|.|.+.| |+|+-| ++.|.-|+.++++.+++++ |.-|
T Consensus 174 ~~~iT~e~l~~~~~i~~~~L~~~fGi~---~PriaVaG-LNPHaGE~G~lG~EE~diI~Paie~aR~~Gi~~~--GPlp- 246 (332)
T COG1995 174 PDAITPELLLEVLRILDKDLRKKFGIA---EPRIAVAG-LNPHAGEGGLLGREEIDIIIPAIEEARAEGIDLV--GPLP- 246 (332)
T ss_pred HhhhCHHHHHHHHHHHHHHHHHhhCCC---CcceEEec-cCCCCCcCCCCCchhHHHHHHHHHHHHHhCCccc--CCCC-
Confidence 445566666677777888999999986 45555444 666554 6777778877776665544 4322
Q ss_pred hhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccc
Q 046057 1003 PRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD 1082 (1198)
Q Consensus 1003 p~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d 1082 (1198)
....|+ ....+.+|.+| ++|---|+..+.++..+.-|=+| .|++=+...
T Consensus 247 -------------------ADT~F~--------~~~~~~~Davl--aMYHDQgliplK~l~Fd~~VNvt--lGLPfiRTS 295 (332)
T COG1995 247 -------------------ADTLFH--------PAYLANYDAVL--AMYHDQGLIPLKYLGFDRGVNVT--LGLPFIRTS 295 (332)
T ss_pred -------------------cchhhh--------hhhhccCCEEE--EeeccccchhhhhhccccceEEe--cCCCeeeec
Confidence 112222 12233358877 55667889999998887654443 566666555
Q ss_pred cccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1083 VDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1083 ~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.||.+ |-+. ...| -.|+.++..||+
T Consensus 296 ~DHGT--AfDi--AgkG----iA~~~S~~~Ai~ 320 (332)
T COG1995 296 VDHGT--AFDI--AGKG----IADPGSLIAAIK 320 (332)
T ss_pred CCccc--hhhh--hcCC----cCCchHHHHHHH
Confidence 54432 1000 0112 347788887777
No 310
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=24.03 E-value=8.9e+02 Score=25.76 Aligned_cols=60 Identities=20% Similarity=0.262 Sum_probs=35.8
Q ss_pred HhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCC
Q 046057 986 RTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSI 1050 (1198)
Q Consensus 986 ~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~ 1050 (1198)
.+.+.+.++++++.. .+.++.++++++...+..+......+.+.+...++.+|+++..+-
T Consensus 47 ~l~~~g~~V~l~~R~-----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~ 106 (194)
T cd01078 47 LLAREGARVVLVGRD-----LERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGA 106 (194)
T ss_pred HHHHCCCEEEEEcCC-----HHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCC
Confidence 334457788888643 234555555443211234554444566667788899999888654
No 311
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=24.02 E-value=3.1e+02 Score=31.83 Aligned_cols=137 Identities=13% Similarity=0.127 Sum_probs=73.7
Q ss_pred CCccCCCccCCCCCCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhC--CCeEEEEeeCCCCCcccccccccccccc
Q 046057 693 GMDYHIPVFGGVVKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDL--NHNVDIILPKYDCLKFSDVKDLGYNRSY 770 (1198)
Q Consensus 693 ~~~~h~~~~g~~~~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~--GH~V~VItP~y~~~~~~~~~~l~~~~~~ 770 (1198)
+++.++. ...++|||+++++ |+ +.-..+|..+.+.. +++|.++....+.. ..+
T Consensus 78 ~l~i~l~-----~~~~~~ri~vl~S--------g~-gsnl~al~~~~~~~~~~~~i~~visn~~~~-----~~l------ 132 (286)
T PRK06027 78 EMDWRLL-----DSAERKRVVILVS--------KE-DHCLGDLLWRWRSGELPVEIAAVISNHDDL-----RSL------ 132 (286)
T ss_pred CCEEEEc-----ccccCcEEEEEEc--------CC-CCCHHHHHHHHHcCCCCcEEEEEEEcChhH-----HHH------
Confidence 4555554 2346899998863 33 67788888887764 56777665442211 100
Q ss_pred cCCCceeEEeeceecCeEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHH
Q 046057 771 HWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFK 850 (1198)
Q Consensus 771 ~~g~~~i~V~~~~~~Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk 850 (1198)
....|++++.++... ..+. -+...+++.++. .+||+|.+-.|..-+-+.++.
T Consensus 133 -----------A~~~gIp~~~~~~~~--~~~~-------------~~~~~~~~~l~~--~~~Dlivlagy~~il~~~~l~ 184 (286)
T PRK06027 133 -----------VERFGIPFHHVPVTK--ETKA-------------EAEARLLELIDE--YQPDLVVLARYMQILSPDFVA 184 (286)
T ss_pred -----------HHHhCCCEEEeccCc--cccc-------------hhHHHHHHHHHH--hCCCEEEEecchhhcCHHHHh
Confidence 223477777665431 1110 122335666665 489999998776544444433
Q ss_pred HhhhhcCCCCCeEEEEecCCch----hhhHHHHHHhccCEEEEe
Q 046057 851 DHYVHYGLSKARIVFTIHNLEF----GTHHIGKAMTYADKATTV 890 (1198)
Q Consensus 851 ~~y~~~gl~~ipvV~tIHn~~~----~~~li~~~~~~AD~VitV 890 (1198)
..- .-++.+|-.-. +.+-+.+++.+-++.+.+
T Consensus 185 ~~~--------~~iiNiHpSLLP~yrG~~~~~~ai~~G~~~tG~ 220 (286)
T PRK06027 185 RFP--------GRIINIHHSFLPAFKGAKPYHQAYERGVKLIGA 220 (286)
T ss_pred hcc--------CCceecCcccCCCCCCCCHHHHHHHCCCCeEEE
Confidence 221 13677775422 234445555555554444
No 312
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=23.74 E-value=2.7e+02 Score=28.88 Aligned_cols=90 Identities=20% Similarity=0.157 Sum_probs=56.1
Q ss_pred HHHHHHHHhhcC-C--cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEcc-----CChH----HHHHHHHH--ccE
Q 046057 979 LIKHAIWRTLDR-G--GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLT-----YDEP----LSHLIYAG--ADF 1044 (1198)
Q Consensus 979 lIleAl~~ll~~-~--~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~-----~d~~----~l~~iyA~--ADi 1044 (1198)
.++.+..++.+. + +..+++|+ .+.....+++....+|. ++|..+.. ++.+ .+..++.. .|+
T Consensus 19 e~l~~A~~La~~~g~~v~av~~G~--~~~~~~~l~~~l~~~G~---d~v~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~l 93 (164)
T PF01012_consen 19 EALEAARRLAEALGGEVTAVVLGP--AEEAAEALRKALAKYGA---DKVYHIDDPALAEYDPEAYADALAELIKEEGPDL 93 (164)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEEET--CCCHHHHHHHHHHSTTE---SEEEEEE-GGGTTC-HHHHHHHHHHHHHHHT-SE
T ss_pred HHHHHHHHHHhhcCCeEEEEEEec--chhhHHHHhhhhhhcCC---cEEEEecCccccccCHHHHHHHHHHHHHhcCCCE
Confidence 455555666543 3 55677774 23356667676666665 56666432 2222 23444554 899
Q ss_pred EEEcCCCCCCcHHHHHHHHhCCcEEEeCC
Q 046057 1045 ILVPSIFEPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1045 ~LvPS~~EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
+|+|+...+..+...-|.+.|.|+|+..+
T Consensus 94 Vl~~~t~~g~~la~~lA~~L~~~~v~~v~ 122 (164)
T PF01012_consen 94 VLFGSTSFGRDLAPRLAARLGAPLVTDVT 122 (164)
T ss_dssp EEEESSHHHHHHHHHHHHHHT-EEEEEEE
T ss_pred EEEcCcCCCCcHHHHHHHHhCCCccceEE
Confidence 99999887777999999999998887543
No 313
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=23.61 E-value=1.2e+02 Score=39.06 Aligned_cols=50 Identities=20% Similarity=0.436 Sum_probs=38.2
Q ss_pred CCCCcEEEEeecCCccccccceecccccC-CCCeEEEEEE-ecCCceeEeEEEEcCC
Q 046057 290 KNEPDVLIMGAFNDWRWKSFTFRLNKTHL-KGDWWSCQVH-VPKEAFKIDFVFFNGQ 344 (1198)
Q Consensus 290 ~~~~~v~ih~GfN~W~~~~~~~~~~~t~~-~~dWw~~~v~-VP~~A~~lnFvF~dg~ 344 (1198)
.++..|.+++.||+|..-.. ++... ..+||..+|. +|+. ++--|++.|..
T Consensus 45 P~a~~V~vvgdfn~w~~~~~----~~~~~~~~G~we~~vp~~~~G-~~Yky~l~~~~ 96 (628)
T COG0296 45 PNARRVSLVGDFNDWDGRRM----PMRDRKESGIWELFVPGAPPG-TRYKYELIDPS 96 (628)
T ss_pred CCCCeEEEEeecCCccceec----ccccCCCCceEEEeccCCCCC-CeEEEEEeCCC
Confidence 57889999999999955433 33222 4689999999 8776 88899998863
No 314
>cd05813 CBM20_genethonin_1 Genethonin-1, C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Genethonin-1 is a human skeletal muscle protein with no known function. It contains a C-terminal CBM20 domain. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognition of appropriate regions of starch.
Probab=23.61 E-value=2.3e+02 Score=26.99 Aligned_cols=60 Identities=22% Similarity=0.454 Sum_probs=33.8
Q ss_pred CCCCceEEEEEe---CCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecCCCCCCccccCCC
Q 046057 465 AHAKELWIHGGY---NNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAIVYDNNS 532 (1198)
Q Consensus 465 ~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~~~~~~~~wDNN~ 532 (1198)
.+.+.|+|-|.. .+|.. . ..|. ..++..|.++|.+|... .+.+-|.--..++...|.+..
T Consensus 13 ~~~e~l~v~G~~~~LG~W~~--~--~~l~---~~~~~~W~~~v~lp~~~-~ieYky~~~~~~~~~~WE~~~ 75 (95)
T cd05813 13 SDAQLVAVTGDHEELGSWHS--Y--IPLQ---YVKDGFWSASVSLPVDT-HVEWKFVLVENGQVTRWEECS 75 (95)
T ss_pred CCCeEEEEEcChHHHCCCCc--c--ccCc---CCCCCCEEEEEEecCCC-cEEEEEEEEcCCCEEEeecCC
Confidence 455678887766 58873 1 2332 22345599999999865 455555321111223576654
No 315
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=23.56 E-value=5.3e+02 Score=29.66 Aligned_cols=37 Identities=24% Similarity=0.109 Sum_probs=24.6
Q ss_pred ccEEEEc-CCCCCCcHHHHHHHHhCCcEEE-eCCccccccc
Q 046057 1042 ADFILVP-SIFEPCGLTQLVAMRYGSIPVV-RKTGGLYDTV 1080 (1198)
Q Consensus 1042 ADi~LvP-S~~EpfGLt~LEAMa~G~PvIv-t~tGGl~E~V 1080 (1198)
=|++++. ...| -.++.||-..|+|||+ -+|..-+|.|
T Consensus 157 Pd~l~ViDp~~e--~iAv~EA~klgIPVvAlvDTn~dpd~V 195 (252)
T COG0052 157 PDVLFVIDPRKE--KIAVKEANKLGIPVVALVDTNCDPDGV 195 (252)
T ss_pred CCEEEEeCCcHh--HHHHHHHHHcCCCEEEEecCCCCCccC
Confidence 4555543 2334 3788999999999998 5555555554
No 316
>cd05816 CBM20_DPE2_repeat2 Disproportionating enzyme 2 (DPE2), N-terminal CBM20 (carbohydrate-binding module, family 20) domain, repeat 2. DPE2 is a transglucosidase that is essential for the cytosolic metabolism of maltose in plant leaves at night. Maltose is an intermediate on the pathway from starch to sucrose and DPE2 is thought to metabolize the maltose that is exported from the chloroplast. DPE2 has two N-terminal CBM20 domains as well as a C-terminal amylomaltase (4-alpha-glucanotransferase) catalytic domain. DPE1, the plastid version of this enzyme, has a transglucosidase domain that is similar to that of DPE2 but lacks the N-terminal CBM20 domains. Included in this group are PDE2-like proteins from Dictyostelium, Entamoeba, and Bacteroides. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in star
Probab=23.48 E-value=2.1e+02 Score=27.59 Aligned_cols=53 Identities=15% Similarity=0.410 Sum_probs=29.5
Q ss_pred CCccccccceecccccCCCCeEEEEEEecCCc--eeEeEEEEcC---CcccccCCCCceEEEE
Q 046057 302 NDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEA--FKIDFVFFNG---QNIYENNDQKDFCIAV 359 (1198)
Q Consensus 302 N~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A--~~lnFvF~dg---~~~wDNN~g~d~~~~V 359 (1198)
.+|...+- ..|..+. +.-|.+++.+|... .+.-||..++ .-.|+.. .|-.+.+
T Consensus 27 G~W~~~~a-~~l~~~~--~~~W~~~v~~p~~~~~ieYKyvi~~~~~~~~~WE~g--~nr~~~~ 84 (99)
T cd05816 27 GNWDPQKA-LKLSDVG--FPIWEADIDISKDSFPFEYKYIIANKDSGVVSWENG--PNRELSA 84 (99)
T ss_pred CCCCcccc-ccCCCCC--CCcEEEEEEeCCCCccEEEEEEEEeCCCCcEEEEcC--CCeEEEC
Confidence 34865433 3454433 44599999998754 4455555443 3457664 4444433
No 317
>PRK10867 signal recognition particle protein; Provisional
Probab=23.48 E-value=1.5e+03 Score=28.11 Aligned_cols=127 Identities=12% Similarity=0.125 Sum_probs=65.4
Q ss_pred HHHHHHHHHHhhcCCcEEEEEecCCC----hhhHHHHHHHHHHhCCCCCCcEEEEccC-C-hHH---HHHHHHH--ccEE
Q 046057 977 IHLIKHAIWRTLDRGGQVVLLGSAPD----PRIQNDFVNLANELHSSHADRARLCLTY-D-EPL---SHLIYAG--ADFI 1045 (1198)
Q Consensus 977 idlIleAl~~ll~~~~qLVIvGsgpd----p~i~~~L~~la~eLgl~~~drV~f~g~~-d-~~~---l~~iyA~--ADi~ 1045 (1198)
..+..+++......+..+||+-.++. ..+...+..+.... .|+.+.|+..- . ++. ...+... .+-+
T Consensus 169 ~~i~~~a~~~a~~~~~DvVIIDTaGrl~~d~~lm~eL~~i~~~v---~p~evllVlda~~gq~av~~a~~F~~~~~i~gi 245 (433)
T PRK10867 169 VDIAKAALEEAKENGYDVVIVDTAGRLHIDEELMDELKAIKAAV---NPDEILLVVDAMTGQDAVNTAKAFNEALGLTGV 245 (433)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCcccCHHHHHHHHHHHHhh---CCCeEEEEEecccHHHHHHHHHHHHhhCCCCEE
Confidence 34444566655556777888766542 23334444444432 36666655532 2 122 1222222 3445
Q ss_pred EEcCCCC--CCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1046 LVPSIFE--PCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1046 LvPS~~E--pfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
|++-.-+ -.|.++--+...|+|+.-..+|--.|-+..++++... ..++..+|..+|.+.+.
T Consensus 246 IlTKlD~~~rgG~alsi~~~~~~PI~fig~Ge~v~DLe~f~p~~~~---------~~ilgmgD~~~l~e~~~ 308 (433)
T PRK10867 246 ILTKLDGDARGGAALSIRAVTGKPIKFIGTGEKLDDLEPFHPDRMA---------SRILGMGDVLSLIEKAQ 308 (433)
T ss_pred EEeCccCcccccHHHHHHHHHCcCEEEEeCCCccccCccCCHHHHH---------HHHhCCCChHHHHHHHH
Confidence 5544322 2666777778889998887776433444444444321 22334556666665444
No 318
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=23.33 E-value=3e+02 Score=32.88 Aligned_cols=42 Identities=19% Similarity=0.357 Sum_probs=32.5
Q ss_pred CcEEEEEccccCCCCCCCcHH--HHHHHHHHHHHhCCCeEEEEeeCCCC
Q 046057 709 PMHIVHIAVEMAPIAKVGGLG--DVVTSLSRTVQDLNHNVDIILPKYDC 755 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~--~vV~~LarAL~~~GH~V~VItP~y~~ 755 (1198)
|.-|+.|.+ ..+||.| -++..|++.|+++|+.|-|++..|+.
T Consensus 55 pvPVIsVGN-----itvGGTGKTP~v~~La~~l~~~G~~~~IlSRGYg~ 98 (338)
T PRK01906 55 GVPVVVVGN-----VTVGGTGKTPTVIALVDALRAAGFTPGVVSRGYGA 98 (338)
T ss_pred CCCEEEECC-----ccCCCCChHHHHHHHHHHHHHcCCceEEEecCCCC
Confidence 455665543 2477775 57889999999999999999998875
No 319
>cd05467 CBM20 The family 20 carbohydrate-binding module (CBM20), also known as the starch-binding domain, is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognition of appropriate regions of starch.
Probab=23.21 E-value=3.9e+02 Score=25.00 Aligned_cols=53 Identities=17% Similarity=0.454 Sum_probs=28.9
Q ss_pred CccccccceecccccCCCCeEEEEEEecC--C-ceeEeEEEEcC--CcccccCCCCceEEEE
Q 046057 303 DWRWKSFTFRLNKTHLKGDWWSCQVHVPK--E-AFKIDFVFFNG--QNIYENNDQKDFCIAV 359 (1198)
Q Consensus 303 ~W~~~~~~~~~~~t~~~~dWw~~~v~VP~--~-A~~lnFvF~dg--~~~wDNN~g~d~~~~V 359 (1198)
+|....- ..|..+. .++-|.+++.+|. . ..+.-|+..++ .-.|+... |-.+.+
T Consensus 27 ~W~~~~a-~~m~~~~-~~~~W~~~v~~~~~~~~~~~yKy~~~~~~~~~~wE~~~--~r~~~~ 84 (96)
T cd05467 27 NWDPAKA-LRLNTSN-SYPLWTGEIPLPAPEGQVIEYKYVIVDDDGNVQWESGS--NRVLTV 84 (96)
T ss_pred CcChhcC-ccccCCC-CCCcEEEEEEecCCCCCeEEEEEEEECCCCCEEeccCC--CeEEEc
Confidence 3754332 4454444 1344999999988 3 24444555443 44577665 444444
No 320
>cd05811 CBM20_glucoamylase Glucoamylase (glucan1,4-alpha-glucosidase), C-terminal CBM20 (carbohydrate-binding module, family 20) domain. Glucoamylases are inverting, exo-acting starch hydrolases that hydrolyze starch and related polysaccharides by releasing the nonreducing end glucose. They are mainly active on alpha-1,4-glycosidic bonds but also have some activity towards 1,6-glycosidic bonds occurring in natural oligosaccharides. The ability of glucoamylases to cleave 1-6-glycosidic binds is called "debranching activity" and is of importance in industrial applications, where complete degradation of starch to glucose is needed. Most glucoamylases are multidomain proteins containing an N-terminal catalytic domain, a C-terminal CBM20 domain, and a highly O-glycosylated linker region that connects the two. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also
Probab=23.09 E-value=1.7e+02 Score=28.42 Aligned_cols=80 Identities=19% Similarity=0.436 Sum_probs=40.2
Q ss_pred eEEEEEcccCCCCCCCCcEEEEeec---CCccccccceeccccc--CCCCeEEEEEEecCCceeEeEEE--E--cCCccc
Q 046057 277 DIEVFLNRSLSTLKNEPDVLIMGAF---NDWRWKSFTFRLNKTH--LKGDWWSCQVHVPKEAFKIDFVF--F--NGQNIY 347 (1198)
Q Consensus 277 ~v~v~yN~~l~~L~~~~~v~ih~Gf---N~W~~~~~~~~~~~t~--~~~dWw~~~v~VP~~A~~lnFvF--~--dg~~~w 347 (1198)
.|.|.|+-.... .-.+.+.|-+-. .+|....- ..|..+. ..++-|.+++.+|... .+.|=| . |+.-.|
T Consensus 6 ~v~V~F~i~~~t-~~Ge~l~v~G~~~~LG~W~~~~a-~~m~~~~~t~~~~~W~~~v~lp~~~-~veYKy~~~~~~~~~~W 82 (106)
T cd05811 6 TVAVTFNERVTT-SYGENIKIVGSIPQLGNWDTSSA-VALSASQYTSSNPLWSVTIPLPAGT-SFEYKFIRKESDGSVTW 82 (106)
T ss_pred EEEEEEEEeeEc-CCCCeEEEEeCcHHHCCCChhhC-cccccccCccCCCcEEEEEEeCCCC-cEEEEEEEEcCCCcEEE
Confidence 355555533222 222344443322 46865433 3454321 1234599999999754 344444 3 234468
Q ss_pred ccCCCCceEEEEcC
Q 046057 348 ENNDQKDFCIAVEG 361 (1198)
Q Consensus 348 DNN~g~d~~~~V~~ 361 (1198)
+... |-.+.+..
T Consensus 83 E~~~--nr~~~~~~ 94 (106)
T cd05811 83 ESDP--NRSYTVPS 94 (106)
T ss_pred ecCC--CeEEECCC
Confidence 7765 55555554
No 321
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=23.08 E-value=1.2e+02 Score=34.54 Aligned_cols=35 Identities=26% Similarity=0.404 Sum_probs=26.8
Q ss_pred cEEEEEccccCCCCCCC--cHHHHHHHHHHHHHhCCCeEEEEe
Q 046057 710 MHIVHIAVEMAPIAKVG--GLGDVVTSLSRTVQDLNHNVDIIL 750 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvG--Gl~~vV~~LarAL~~~GH~V~VIt 750 (1198)
|+|+.|.. + .| |-.+++.+|+.+|++.|..|.+|=
T Consensus 1 M~~iai~s---~---kGGvG~TTltAnLA~aL~~~G~~VlaID 37 (243)
T PF06564_consen 1 MKVIAIVS---P---KGGVGKTTLTANLAWALARLGESVLAID 37 (243)
T ss_pred CcEEEEec---C---CCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 67666653 2 34 556788899999999999999884
No 322
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=22.97 E-value=90 Score=38.15 Aligned_cols=36 Identities=25% Similarity=0.244 Sum_probs=30.5
Q ss_pred CCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEee
Q 046057 706 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILP 751 (1198)
Q Consensus 706 ~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP 751 (1198)
.+++|||++ +||.|-+=..|++.|.++||+|.++..
T Consensus 117 ~~~~mkILV----------TGatGFIGs~Lv~~Ll~~G~~V~~ldr 152 (436)
T PLN02166 117 GRKRLRIVV----------TGGAGFVGSHLVDKLIGRGDEVIVIDN 152 (436)
T ss_pred ccCCCEEEE----------ECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 467899885 578888999999999999999988763
No 323
>KOG3925 consensus Uncharacterized conserved protein [Function unknown]
Probab=22.92 E-value=1.6e+02 Score=35.13 Aligned_cols=115 Identities=30% Similarity=0.319 Sum_probs=70.3
Q ss_pred ceEEecCCCCcC-CCceEEEEEcCC-CCCCCCCceeEEecccccccccCCCCCCcceeecCCcceeEEEeecCCCccccc
Q 046057 599 KHIVYTDPLDVQ-AGTTVTVFYNPA-NTVLNGKSEIWFRCSFNHWTHRMGILPPQKMVPVKYSTHVKTTVKVPLDAYTMD 676 (1198)
Q Consensus 599 ~~~~~~~~~~~~-~g~~~~~~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~a~~~~ 676 (1198)
++.||-+...++ +|.-|||-.|+. +|+.. .+..+..|+... .+.|--|.=+|.. |..+.
T Consensus 206 ~k~v~I~~~~v~~p~~RvtV~l~aq~~~~~t---------------~~g~IVSp~~pr-~~tGlywGY~VR~---assls 266 (371)
T KOG3925|consen 206 KKEVYIDSKAVEAPGTRVTVRLNAQTVTCDT---------------LRGKIVSPQDPR-EETGLYWGYKVRL---ASSLS 266 (371)
T ss_pred eeeEEecchhhcCCcceEEEecCCcCchhhh---------------hcccccCCCCcc-cccCcccceeeeh---hhhHH
Confidence 567777756666 899899998876 33221 111234444443 2233335555544 44577
Q ss_pred ccccccCCCCccCCCCCCccCCCccCCCC--CCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHh
Q 046057 677 FVFSEWEDGGTFDNKNGMDYHIPVFGGVV--KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQD 741 (1198)
Q Consensus 677 ~vfs~~~~~~~~d~~~~~~~h~~~~g~~~--~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~ 741 (1198)
.||+..+=.+.||-.-|...|.+...... .+++-||++| +||++..+..+-+-.+.
T Consensus 267 ~vf~~~P~~~GYD~~vg~s~rg~~I~s~~~~~~t~~~iLlv---------fg~l~~l~~a~e~~~~~ 324 (371)
T KOG3925|consen 267 EVFSESPFKGGYDFVVGTSTRGSAIASLSLEAETPPHILLV---------FGGLAGLVRAFELDEQT 324 (371)
T ss_pred HHhhcCCccCCcceEEEeccCCccccccccccCCCCcEEEE---------eechhhHHHHHHhccch
Confidence 78887776666886666666666555444 4677788887 57888777766655443
No 324
>COG0233 Frr Ribosome recycling factor [Translation, ribosomal structure and biogenesis]
Probab=22.86 E-value=2.9e+02 Score=30.36 Aligned_cols=76 Identities=24% Similarity=0.339 Sum_probs=42.4
Q ss_pred cCCCCceEEEEcCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Q 046057 349 NNDQKDFCIAVEGLMDALAFEDFLLEEKRREQEKLAKEKAEQERQEEERRRIEAEHAAIEADRAQ--ARVETERKREMLR 426 (1198)
Q Consensus 349 NN~g~d~~~~V~~g~~~~~~~~~~~ee~r~~~e~la~e~aer~~~~~e~rr~~~~~aa~~a~~a~--A~~~~~~~~~~~~ 426 (1198)
||+|..-.+.+.. +-||.|+++-+.++..+|.-|.+-.--|.++....+...+.. .+.+..+..+.++
T Consensus 94 ~~dG~~IRv~~P~----------lTeErRkelvK~~k~~~EeakvaiRniRrda~d~iKK~~K~~~isEDe~k~~e~~iQ 163 (187)
T COG0233 94 NNDGNVIRVPLPP----------LTEERRKELVKVAKKYAEEAKVAVRNIRRDANDKIKKLEKDKEISEDEVKKAEEEIQ 163 (187)
T ss_pred CcCCCeEEecCCC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 5677774444332 236789999999888888877655543444333333332222 2444455555555
Q ss_pred HHHHHhhc
Q 046057 427 ELKKKAAR 434 (1198)
Q Consensus 427 ~~~~~a~~ 434 (1198)
.+-+.+..
T Consensus 164 KlTd~yi~ 171 (187)
T COG0233 164 KLTDEYIK 171 (187)
T ss_pred HHHHHHHH
Confidence 55555543
No 325
>PRK04155 chaperone protein HchA; Provisional
Probab=22.84 E-value=1.9e+02 Score=33.58 Aligned_cols=54 Identities=20% Similarity=0.228 Sum_probs=33.8
Q ss_pred CCccCCCccCCCCCCCCcEEEEEccccCCCC-CC-----CcH-HHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 693 GMDYHIPVFGGVVKEPPMHIVHIAVEMAPIA-KV-----GGL-GDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 693 ~~~~h~~~~g~~~~e~pMKIL~Vs~e~~P~a-kv-----GGl-~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|.+|-.+..|+ +|||+|++...-+. .. -|. ..=+..-...|.+.|++|+++++.
T Consensus 39 ~~~~~~~~~~~------kkiL~v~t~~~~~~~~~g~~~~tG~~~~E~~~P~~~L~~AG~eVdiAS~~ 99 (287)
T PRK04155 39 GVDYPKPYRGG------KKILMIAADERYLPMDNGKLFSTGNHPVETLLPMYHLHKAGFEFDVATLS 99 (287)
T ss_pred CCcCCCcCCCC------CeEEEEEcCcccccCCCCCcCCCCccHHHHHHHHHHHHHCCCEEEEEecC
Confidence 45565555553 49999998765432 11 222 222233356889999999999986
No 326
>PLN02208 glycosyltransferase family protein
Probab=22.81 E-value=1.4e+02 Score=36.72 Aligned_cols=45 Identities=13% Similarity=-0.045 Sum_probs=29.8
Q ss_pred cEEEEccCChHHHHHHHHHccEEEEcCCCCCCc-HHHHHHHHhCCcEEEeCC
Q 046057 1023 RARLCLTYDEPLSHLIYAGADFILVPSIFEPCG-LTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1023 rV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfG-Lt~LEAMa~G~PvIvt~t 1073 (1198)
++.+.++.++ ..+++...+-++=+. || .+.+||+++|+|+|+-..
T Consensus 312 g~~v~~W~PQ---~~iL~H~~v~~FvtH---cG~nS~~Eai~~GVP~l~~P~ 357 (442)
T PLN02208 312 GVVWGGWVQQ---PLILDHPSIGCFVNH---CGPGTIWESLVSDCQMVLIPF 357 (442)
T ss_pred CcEeeccCCH---HHHhcCCccCeEEcc---CCchHHHHHHHcCCCEEecCc
Confidence 4444455555 346666666444343 56 688999999999998544
No 327
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=22.66 E-value=1e+03 Score=27.26 Aligned_cols=36 Identities=19% Similarity=0.377 Sum_probs=26.5
Q ss_pred EEEEEccccCCCCCCCcHH--HHHHHHHHHHHhCCCeEEEEeeC
Q 046057 711 HIVHIAVEMAPIAKVGGLG--DVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 711 KIL~Vs~e~~P~akvGGl~--~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
+|+.|++ .-||.+ +...+|+-+|+.+|++|.+|--.
T Consensus 3 ~iIVvTS------GKGGVGKTTttAnig~aLA~~GkKv~liD~D 40 (272)
T COG2894 3 RIIVVTS------GKGGVGKTTTTANIGTALAQLGKKVVLIDFD 40 (272)
T ss_pred eEEEEec------CCCCcCccchhHHHHHHHHHcCCeEEEEecC
Confidence 5666653 456665 45667999999999999998644
No 328
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=22.54 E-value=86 Score=35.69 Aligned_cols=31 Identities=19% Similarity=0.394 Sum_probs=23.7
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEee
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILP 751 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP 751 (1198)
|||++| |.|.+-..++..|++.||+|.++..
T Consensus 1 mkI~Ii-----------G~G~iG~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVV-----------GAGAVGGTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEE-----------CCCHHHHHHHHHHHHCCCceEEEec
Confidence 788887 3344556677788889999999975
No 329
>PRK08273 thiamine pyrophosphate protein; Provisional
Probab=22.36 E-value=2.5e+02 Score=35.70 Aligned_cols=67 Identities=12% Similarity=0.061 Sum_probs=37.8
Q ss_pred HHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCC--------------CCCcEEEEccCChHHHHHHHHHccEE
Q 046057 980 IKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSS--------------HADRARLCLTYDEPLSHLIYAGADFI 1045 (1198)
Q Consensus 980 IleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~--------------~~drV~f~g~~d~~~l~~iyA~ADi~ 1045 (1198)
+-+++..+....-.++++|.|- ....+.+.++++.++.. ||..+-..|.+..+....++..||++
T Consensus 198 i~~a~~~L~~AkrPvi~~G~g~-~~a~~~l~~lae~~~~PV~tt~~gkg~~~e~hp~~~G~~G~~g~~~a~~~~~~aDlv 276 (597)
T PRK08273 198 LRRAAEVLNAGRKVAILVGAGA-LGATDEVIAVAERLGAGVAKALLGKAALPDDLPWVTGSIGLLGTKPSYELMRECDTL 276 (597)
T ss_pred HHHHHHHHhcCCCEEEEECcch-HhHHHHHHHHHHHhCCceeecccCcccCCCCCccceecCCCCccHHHHHHHHhCCEE
Confidence 3334444433344566677663 24456677777777652 22222223334455566788999998
Q ss_pred EE
Q 046057 1046 LV 1047 (1198)
Q Consensus 1046 Lv 1047 (1198)
|+
T Consensus 277 l~ 278 (597)
T PRK08273 277 LM 278 (597)
T ss_pred EE
Confidence 86
No 330
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=22.35 E-value=3.3e+02 Score=26.84 Aligned_cols=37 Identities=8% Similarity=0.194 Sum_probs=26.8
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
+||+++|..- -..+.++..+-+++.++|.+++|..-.
T Consensus 1 ~~Ill~C~~G------aSSs~la~km~~~a~~~gi~~~i~a~~ 37 (99)
T cd05565 1 LNVLVLCAGG------GTSGLLANALNKGAKERGVPLEAAAGA 37 (99)
T ss_pred CEEEEECCCC------CCHHHHHHHHHHHHHHCCCcEEEEEee
Confidence 5899888311 123667777888899999999988644
No 331
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=22.22 E-value=2.3e+02 Score=32.23 Aligned_cols=98 Identities=18% Similarity=0.240 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEE-E-EccCChHHHHHHH-----HHccEEEEc
Q 046057 976 GIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRAR-L-CLTYDEPLSHLIY-----AGADFILVP 1048 (1198)
Q Consensus 976 GidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~-f-~g~~d~~~l~~iy-----A~ADi~LvP 1048 (1198)
|.+++.+.+.....++.++.++|+.++ -+....+.+..++++ ++. . .|.++.++...+. .++|++++-
T Consensus 90 G~dl~~~ll~~~~~~~~~v~llG~~~~-v~~~a~~~l~~~y~l----~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~Vg 164 (243)
T PRK03692 90 GADLWEALMARAGKEGTPVFLVGGKPE-VLAQTEAKLRTQWNV----NIVGSQDGYFTPEQRQALFERIHASGAKIVTVA 164 (243)
T ss_pred hHHHHHHHHHHHHhcCCeEEEECCCHH-HHHHHHHHHHHHhCC----EEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999988887777889999998632 122222333333332 222 2 3445433322222 478888873
Q ss_pred ---CCCCCCcHHHHHHHHhCCcEEEeCCcccccccc
Q 046057 1049 ---SIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVF 1081 (1198)
Q Consensus 1049 ---S~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~ 1081 (1198)
.+.|-|-.-.. -..+. +|.-.+||.-|.+.
T Consensus 165 lG~PkQE~~~~~~~--~~~~~-~v~~gvGg~fD~~a 197 (243)
T PRK03692 165 MGSPKQEIFMRDCR--LVYPD-ALYMGVGGTYDVFT 197 (243)
T ss_pred CCCcHHHHHHHHHH--HhCCC-CEEEEeCeEEEEec
Confidence 22354432222 12233 44556888887664
No 332
>cd02857 CD_pullulan_degrading_enzymes_N_term CD and pullulan-degrading enzymes N-terminus domain. Members of this subgroup include: Cyclomaltodextrinase (CDase), maltogenic amylase, and neopullulanase all of which are capable of hydrolyzing all or two of the following three types of substrates: cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. The N-terminus of the CD and pullulan-degrading enzymes may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of
Probab=22.21 E-value=3.7e+02 Score=25.87 Aligned_cols=61 Identities=11% Similarity=0.122 Sum_probs=37.3
Q ss_pred CeEEEEEcccCCCCCCCCcEEEEeecCCccccccceecccccC--CCCeEEEEEEecCCceeEeEEEE
Q 046057 276 QDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHL--KGDWWSCQVHVPKEAFKIDFVFF 341 (1198)
Q Consensus 276 ~~v~v~yN~~l~~L~~~~~v~ih~GfN~W~~~~~~~~~~~t~~--~~dWw~~~v~VP~~A~~lnFvF~ 341 (1198)
++|+|..=-. .....+|.|+.+-+.|.+......|.+... ..+||.|+|.++. ..+...|.
T Consensus 16 ~~v~irlr~~---~~~v~~v~l~~~~~~~~~~~~~~~M~~~~~~~~~~~~~~~i~~~~--~~~~Y~F~ 78 (116)
T cd02857 16 DTLHIRLRTK---KGDVAKVYLRYGDPYDKGEEEEVPMRKDGSDELFDYWEATLPPPT--GRLRYYFE 78 (116)
T ss_pred CEEEEEEEec---CCCccEEEEEEECCCCCCCceEEEEEEeeeCCceeEEEEEEecCC--cEEEEEEE
Confidence 7788877532 134677888876554433333456666654 2478999999764 55554443
No 333
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=22.10 E-value=1.6e+03 Score=27.91 Aligned_cols=111 Identities=6% Similarity=0.047 Sum_probs=61.2
Q ss_pred HHHHHHHHHHhhcCCcEEEEEecCCChhh-HHHHHHHHHHhCCCCCCcEEEEccC----ChHHHHHHHH---HccEEEEc
Q 046057 977 IHLIKHAIWRTLDRGGQVVLLGSAPDPRI-QNDFVNLANELHSSHADRARLCLTY----DEPLSHLIYA---GADFILVP 1048 (1198)
Q Consensus 977 idlIleAl~~ll~~~~qLVIvGsgpdp~i-~~~L~~la~eLgl~~~drV~f~g~~----d~~~l~~iyA---~ADi~LvP 1048 (1198)
.....+++..+...+..+||+-.++.... ...+.++..-.....|+.+.|+..- +.......+. .-+-+|++
T Consensus 168 ~~i~~~~l~~~~~~~~DvViIDTaGr~~~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 168 VKIASEGVEKFKKENFDIIIVDTSGRHKQEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCCCcchHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 45666788877766788888865422211 1223333332223346777776632 1111223332 34556666
Q ss_pred CCCC--CCcHHHHHHHHhCCcEEEeCCccccccccccccch
Q 046057 1049 SIFE--PCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDK 1087 (1198)
Q Consensus 1049 S~~E--pfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~ 1087 (1198)
=.-| -.|-.+--+...|+|+.--.+|--.+-+..++++.
T Consensus 248 KlD~~argG~aLs~~~~t~~PI~fig~Ge~v~Dle~f~p~~ 288 (429)
T TIGR01425 248 KLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEIFKTQP 288 (429)
T ss_pred CccCCCCccHHhhhHHHHCCCeEEEcCCCChhhcCcCChHH
Confidence 5544 36667777889999998877764334444444333
No 334
>PRK05380 pyrG CTP synthetase; Validated
Probab=21.95 E-value=1.7e+03 Score=28.38 Aligned_cols=38 Identities=18% Similarity=0.176 Sum_probs=29.0
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEe
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIIL 750 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VIt 750 (1198)
||-+||+.... +.=|=+..+.+|+.-|+.+|+.|+++-
T Consensus 2 ~k~ifvtGgv~---S~lGKGi~~as~g~ll~~~g~~v~~~K 39 (533)
T PRK05380 2 TKYIFVTGGVV---SSLGKGITAASLGRLLKARGLKVTIQK 39 (533)
T ss_pred ceEEEEcCCcc---cCcchHHHHHHHHHHHHhCCCceEEEe
Confidence 67778875332 223567888999999999999999985
No 335
>PLN00414 glycosyltransferase family protein
Probab=21.93 E-value=1.6e+03 Score=27.83 Aligned_cols=38 Identities=21% Similarity=0.174 Sum_probs=30.0
Q ss_pred CcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 709 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
+.||++|. +. .-|--.=..+|++.|+.+|+.|+++++.
T Consensus 4 ~~HVvlvP-----fp-aqGHi~PmL~LAk~Las~G~~VT~vtt~ 41 (446)
T PLN00414 4 KFHAFMYP-----WF-GFGHMIPYLHLANKLAEKGHRVTFFLPK 41 (446)
T ss_pred CCEEEEec-----Cc-ccchHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 56888874 22 3366677889999999999999999865
No 336
>PF06364 DUF1068: Protein of unknown function (DUF1068); InterPro: IPR010471 This family consists of several hypothetical plant proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown.
Probab=21.87 E-value=7.8e+02 Score=26.76 Aligned_cols=27 Identities=19% Similarity=0.283 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 046057 408 EADRAQARVETERKREMLRELKKKAAR 434 (1198)
Q Consensus 408 ~a~~a~A~~~~~~~~~~~~~~~~~a~~ 434 (1198)
+++|.+|.+...++|.+-.-+...|+.
T Consensus 137 EeAREkaEa~L~~e~KltalWE~RARq 163 (176)
T PF06364_consen 137 EEAREKAEAALVEERKLTALWEQRARQ 163 (176)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777888888887777777777754
No 337
>KOG2357 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.80 E-value=2.2e+02 Score=34.65 Aligned_cols=44 Identities=9% Similarity=0.008 Sum_probs=22.6
Q ss_pred hhhhHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCcEEEecccCC
Q 046057 228 IKASEDASLKLKKEVEENLRKQEIERLADENFLRQKKIFVYPQVVK 273 (1198)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~P~~~~ 273 (1198)
..+..=.++.+.|+|- .|..-|-.|+.-=-|-|+.|-..-+...
T Consensus 177 tGR~~c~gll~~L~l~--~RqDl~S~v~~~v~P~~D~vt~ev~l~d 220 (440)
T KOG2357|consen 177 TGRVNCKGLLLTLKLV--KRQDLLSRVMNSVRPVGDQVTFEVTLND 220 (440)
T ss_pred cchhHHhhhhhhhhhh--hhccHHHHHHHhcccccceEEEEEecCc
Confidence 3444445555544442 2444455566655666666655544443
No 338
>TIGR00460 fmt methionyl-tRNA formyltransferase. The top-scoring characterized proteins other than methionyl-tRNA formyltransferase (fmt) itself are formyltetrahydrofolate dehydrogenases. The mitochondrial methionyl-tRNA formyltransferases are so divergent that, in a multiple alignment of bacterial fmt, mitochondrial fmt, and formyltetrahydrofolate dehydrogenases, the mitochondrial fmt appears the most different. However, because both bacterial and mitochondrial fmt are included in the seed alignment, all credible fmt sequences score higher than any non-fmt sequence. This enzyme modifies Met on initiator tRNA to f-Met.
Probab=21.54 E-value=4.4e+02 Score=30.85 Aligned_cols=122 Identities=21% Similarity=0.247 Sum_probs=0.0
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCC-------CcccccccccccccccCCCceeEEeec
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDC-------LKFSDVKDLGYNRSYHWGGTEIKVWFG 782 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~-------~~~~~~~~l~~~~~~~~g~~~i~V~~~ 782 (1198)
|||+|+ |...+.....++|.+.||+|..|+...+. +....+..+ .
T Consensus 1 mkIvf~-----------Gs~~~a~~~L~~L~~~~~~i~~Vvt~pd~~~~r~~~~~~~~v~~~-----------------A 52 (313)
T TIGR00460 1 LRIVFF-----------GTPTFSLPVLEELREDNFEVVGVVTQPDKPAGRGKKLTPPPVKVL-----------------A 52 (313)
T ss_pred CEEEEE-----------CCCHHHHHHHHHHHhCCCcEEEEEcCCCCccCCCCCCCCChHHHH-----------------H
Q ss_pred eecCeEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCe
Q 046057 783 KVEGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKAR 862 (1198)
Q Consensus 783 ~~~Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ip 862 (1198)
.-.|++++.....+ ....++.++.. +||++.+-.|..-+-.-++. ..+
T Consensus 53 ~~~~Ipv~~~~~~~---------------------~~~~~~~l~~~--~~Dliv~~~~~~iip~~il~---------~~~ 100 (313)
T TIGR00460 53 EEKGIPVFQPEKQR---------------------QLEELPLVREL--KPDVIVVVSFGKILPKEFLD---------LFP 100 (313)
T ss_pred HHcCCCEEecCCCC---------------------cHHHHHHHHhh--CCCEEEEccchhhCCHHHHh---------hcc
Q ss_pred E-EEEecCCch----hhhHHHHHHhccCEEEEeC
Q 046057 863 I-VFTIHNLEF----GTHHIGKAMTYADKATTVS 891 (1198)
Q Consensus 863 v-V~tIHn~~~----~~~li~~~~~~AD~VitVS 891 (1198)
. ++.+|.... +..-+.+++..-+..+.||
T Consensus 101 ~g~iNiHpSlLP~yRG~~pi~wai~~G~~~tGvT 134 (313)
T TIGR00460 101 YGCINVHPSLLPRWRGGAPIQRAILNGDKKTGVT 134 (313)
T ss_pred CCEEEecCccccCCCCccHHHHHHHCCCCeEEEE
No 339
>PF07828 PA-IL: PA-IL-like protein; InterPro: IPR012905 The members of this family are similar to the galactophilic lectin-1 expressed by Pseudomonas aeruginosa (PA-IL, Q05097 from SWISSPROT). Lectins recognising specific carbohydrates found on the surface of host cells are known to be involved in the initiation of infections by this organism. The protein is thought to be organised into an extensive network of beta-sheets, as is the case with many other lectins []. ; PDB: 3ZYB_E 3ZYF_C 1L7L_A 3ZYH_A.
Probab=21.45 E-value=77 Score=32.14 Aligned_cols=27 Identities=19% Similarity=0.305 Sum_probs=17.4
Q ss_pred ceeEeEEEEcCCcccccCCCCceEEEEc
Q 046057 333 AFKIDFVFFNGQNIYENNDQKDFCIAVE 360 (1198)
Q Consensus 333 A~~lnFvF~dg~~~wDNN~g~d~~~~V~ 360 (1198)
..+|-|+|.|..+.|-||.| .|++.|-
T Consensus 91 dGeL~l~f~D~p~~Y~dNSG-~F~V~V~ 117 (121)
T PF07828_consen 91 DGELILLFNDVPGEYGDNSG-EFSVNVY 117 (121)
T ss_dssp -EEEEEEE---TT-GGG-EE-EEEEEEE
T ss_pred CceEEEEEeCCCcccccCCC-cEEEEEE
Confidence 58999999999888999888 5777664
No 340
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=21.39 E-value=1e+02 Score=34.93 Aligned_cols=32 Identities=16% Similarity=0.356 Sum_probs=24.1
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||++|. .|.+-..++..|++.||+|+++...
T Consensus 1 m~I~IiG-----------~G~~G~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 1 MKIAILG-----------AGAIGGLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CEEEEEC-----------CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 7888873 3444567778888899999999853
No 341
>cd05818 CBM20_water_dikinase Phosphoglucan water dikinase (also known as alpha-glucan water dikinase), N-terminal CBM20 (carbohydrate-binding module, family 20) domain. This domain is found in the chloroplast-encoded phosphoglucan water dikinase, one of two enzymes involved in the phosphorylation of plant starches. In addition to the CBM20 domain, phosphoglucan water dikinase contains a C-terminal pyruvate binding domain. The CBM20 domain is found in a large number of starch degrading enzymes including alpha-amylase, beta-amylase, glucoamylase, and CGTase (cyclodextrin glucanotransferase). CBM20 is also present in proteins that have a regulatory role in starch metabolism in plants (e.g. alpha-amylase) or glycogen metabolism in mammals (e.g. laforin). CBM20 folds as an antiparallel beta-barrel structure with two starch binding sites. These two sites are thought to differ functionally with site 1 acting as the initial starch recognition site and site 2 involved in the specific recognitio
Probab=21.23 E-value=2.5e+02 Score=26.85 Aligned_cols=36 Identities=19% Similarity=0.582 Sum_probs=22.9
Q ss_pred EEEEEEecCCc-eeEeEEEE--cCCcccccCCCCceEEEEc
Q 046057 323 WSCQVHVPKEA-FKIDFVFF--NGQNIYENNDQKDFCIAVE 360 (1198)
Q Consensus 323 w~~~v~VP~~A-~~lnFvF~--dg~~~wDNN~g~d~~~~V~ 360 (1198)
|.+++++|... .+.-||.. |+.-.|++. .|-.+.+.
T Consensus 43 W~~~~~l~~~~~ieyKy~~~~~~~~v~WE~g--~Nr~~~~~ 81 (92)
T cd05818 43 WVCDLELDGGELVEYKFVIVKRDGSVIWEGG--NNRVLELP 81 (92)
T ss_pred EEEEEEeCCCCcEEEEEEEEcCCCCEEEEeC--CCEEEEcc
Confidence 89999999753 55666664 445578774 44444444
No 342
>PF15437 PGBA_C: Plasminogen-binding protein pgbA C-terminal
Probab=21.22 E-value=4.1e+02 Score=25.58 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046057 389 EQERQEEERRRIEAEHAAIEADRAQARVETERK 421 (1198)
Q Consensus 389 er~~~~~e~rr~~~~~aa~~a~~a~A~~~~~~~ 421 (1198)
+++++.+|+|..+-+..|++......+...+|+
T Consensus 46 EkKkAKAeqrA~EfEqRakehqErDEkElEERr 78 (86)
T PF15437_consen 46 EKKKAKAEQRAREFEQRAKEHQERDEKELEERR 78 (86)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555545545554444444444443
No 343
>KOG2072 consensus Translation initiation factor 3, subunit a (eIF-3a) [Translation, ribosomal structure and biogenesis]
Probab=21.20 E-value=4.3e+02 Score=34.97 Aligned_cols=17 Identities=35% Similarity=0.378 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHH
Q 046057 395 EERRRIEAEHAAIEADR 411 (1198)
Q Consensus 395 ~e~rr~~~~~aa~~a~~ 411 (1198)
|.+||.++++.|.+..+
T Consensus 810 Er~Rr~EEe~~ae~~ee 826 (988)
T KOG2072|consen 810 ERARREEEEANAERQEE 826 (988)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33455555555544444
No 344
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=21.19 E-value=1.1e+02 Score=32.11 Aligned_cols=32 Identities=25% Similarity=0.454 Sum_probs=26.5
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
.+|++| || |.+....++.|.+.|++|+||.|.
T Consensus 14 ~~vlVv----------GG-G~va~rka~~Ll~~ga~V~VIsp~ 45 (157)
T PRK06719 14 KVVVII----------GG-GKIAYRKASGLKDTGAFVTVVSPE 45 (157)
T ss_pred CEEEEE----------CC-CHHHHHHHHHHHhCCCEEEEEcCc
Confidence 577766 33 788899999999999999999765
No 345
>TIGR01011 rpsB_bact ribosomal protein S2, bacterial type. TIGR01012 describes the archaeal and cytosolic forms.
Probab=21.09 E-value=1.1e+03 Score=26.54 Aligned_cols=38 Identities=21% Similarity=0.100 Sum_probs=25.5
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHhCCcEEE-eCCccccccc
Q 046057 1042 ADFILVPSIFEPCGLTQLVAMRYGSIPVV-RKTGGLYDTV 1080 (1198)
Q Consensus 1042 ADi~LvPS~~EpfGLt~LEAMa~G~PvIv-t~tGGl~E~V 1080 (1198)
-|++++..-. .--.++.||-..|.|+|+ .++..-++.|
T Consensus 156 Pd~vii~d~~-~~~~ai~Ea~~l~IP~I~ivDTn~~p~~i 194 (225)
T TIGR01011 156 PDLLFVIDPV-KEKIAVAEARKLGIPVVAIVDTNCDPDLV 194 (225)
T ss_pred CCEEEEeCCC-ccHHHHHHHHHcCCCEEEEeeCCCCCccc
Confidence 5666665432 234678999999999998 5555445544
No 346
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=20.92 E-value=1.1e+02 Score=33.83 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=25.7
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||++|+. + +.+=..+.+....+||+|+.|+..
T Consensus 1 mKIaiIgA-------s---G~~Gs~i~~EA~~RGHeVTAivRn 33 (211)
T COG2910 1 MKIAIIGA-------S---GKAGSRILKEALKRGHEVTAIVRN 33 (211)
T ss_pred CeEEEEec-------C---chhHHHHHHHHHhCCCeeEEEEeC
Confidence 89999873 2 344466778888999999999965
No 347
>PF11806 DUF3327: Domain of unknown function (DUF3327); InterPro: IPR021764 This entry represents the N-terminal domain of enterochelin esterase. The activity of the enzyme has been characterised [, ]. Fes catalyses the hydrolysis of the 2,3-dihydroxy-N-benzoyl-L-serine trimer, enterochelin, forming 2,3-dihydroxybenzoylserine. It also catalyses hydrolysis of free enterobactin and ferric enterobactin. Upon hydrolysis of ferric enterobactin by Fes, released iron is probably reduced by a second enzyme. Enterochelin esterase represents a family of non-peptidase homologues belonging to the MEROPS peptidase family S9, clan SC. ; GO: 0005506 iron ion binding, 0008849 enterochelin esterase activity, 0006826 iron ion transport, 0005737 cytoplasm; PDB: 3MGA_B 3C87_B 3C8H_B 3C8D_A 2B20_A.
Probab=20.90 E-value=4.4e+02 Score=26.76 Aligned_cols=65 Identities=15% Similarity=0.214 Sum_probs=37.7
Q ss_pred EEEEEEeCCCCCCCCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecC
Q 046057 452 LVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADG 520 (1198)
Q Consensus 452 ~V~v~YN~~~g~L~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~ 520 (1198)
.||..+... .-..+..+.+++..|+.++..+.. .-.+....+-|.|..++.||.+ +....+|.-.
T Consensus 3 ~VTFlWRdp--~~~~~~~~~V~~~~ngvtD~~~~~-~~~l~Rl~gTDVW~~t~~lp~d-~rgSY~~~p~ 67 (122)
T PF11806_consen 3 LVTFLWRDP--DEGASANVRVYGDINGVTDHHDPD-PQSLQRLPGTDVWYWTYRLPAD-WRGSYSFIPD 67 (122)
T ss_dssp EEEEEEE-T--STTT----EEEEEETTTTCGGGT----BEEE-TTSSEEEEEEEEETT--EEEEEEEEE
T ss_pred EEEEEEeCC--CCCCCceeEEEEECCcccccccCC-hhhheeCCCCceEEEEEEECcc-cEEEEEEEec
Confidence 467777722 112456788999999998765422 2222233334789999999995 6888887743
No 348
>PRK01909 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase; Validated
Probab=20.50 E-value=3.6e+02 Score=32.18 Aligned_cols=59 Identities=27% Similarity=0.367 Sum_probs=38.3
Q ss_pred CcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccC---------HHHHHHHHHHhhcCCcEE
Q 046057 932 PVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKG---------IHLIKHAIWRTLDRGGQV 994 (1198)
Q Consensus 932 p~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKG---------idlIleAl~~ll~~~~qL 994 (1198)
|...+.+.+..--......|++.+|+. .|.|.. .-|+|+-| ++.|.-|+..+...++.+
T Consensus 171 ~~~it~e~i~~~i~l~~~~l~~~~gi~---~PrIaV-~GLNPHAGE~G~~G~EE~~iI~PAi~~~~~~Gi~v 238 (329)
T PRK01909 171 SAALTIDGLVETLAIIDRDLRRDFGLA---APRILV-TGLNPHAGENGYLGREEIDVIEPALARARAAGIDA 238 (329)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHhCCC---CCCEEE-EeeCCCCCCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 344555666555666667788889986 355544 44666554 567777888887777653
No 349
>PRK09510 tolA cell envelope integrity inner membrane protein TolA; Provisional
Probab=20.32 E-value=4.5e+02 Score=32.06 Aligned_cols=14 Identities=14% Similarity=0.121 Sum_probs=8.8
Q ss_pred CCcHHHHHHHHHHH
Q 046057 725 VGGLGDVVTSLSRT 738 (1198)
Q Consensus 725 vGGl~~vV~~LarA 738 (1198)
.+|-..++....++
T Consensus 346 sSGd~aldrAA~~A 359 (387)
T PRK09510 346 EGGDPALCQAALAA 359 (387)
T ss_pred CCCCHHHHHHHHHH
Confidence 45666666666666
No 350
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=20.24 E-value=1.7e+02 Score=32.30 Aligned_cols=36 Identities=14% Similarity=-0.044 Sum_probs=28.5
Q ss_pred CcEEEEEccccCCCCCCCcHHHHH--HHHHHHHHhCCCeEEEEeeC
Q 046057 709 PMHIVHIAVEMAPIAKVGGLGDVV--TSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~~vV--~~LarAL~~~GH~V~VItP~ 752 (1198)
.+||++-. +||.+.+- ..|.+.|.+.||+|.+|...
T Consensus 5 ~k~IllgV--------TGsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 5 GKRIGFGL--------TGSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CCEEEEEE--------cCHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 46777543 67777775 79999999999999999854
No 351
>PLN02573 pyruvate decarboxylase
Probab=20.23 E-value=3.2e+02 Score=34.69 Aligned_cols=24 Identities=13% Similarity=0.205 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 729 GDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 729 ~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
-++...|++.|.+.|.+..+-.|.
T Consensus 16 ~~~a~~l~~~L~~~Gv~~vFGvpG 39 (578)
T PLN02573 16 ATLGRHLARRLVEIGVTDVFSVPG 39 (578)
T ss_pred ccHHHHHHHHHHHcCCCEEEECCC
Confidence 345677888888888877776664
No 352
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=20.21 E-value=3.2e+02 Score=32.33 Aligned_cols=47 Identities=30% Similarity=0.416 Sum_probs=34.1
Q ss_pred HHHHHHHHHccEEEE--cCCCCCCcH---HHHHHHHhCCcEEEeCCcccccc
Q 046057 1033 PLSHLIYAGADFILV--PSIFEPCGL---TQLVAMRYGSIPVVRKTGGLYDT 1079 (1198)
Q Consensus 1033 ~~l~~iyA~ADi~Lv--PS~~EpfGL---t~LEAMa~G~PvIvt~tGGl~E~ 1079 (1198)
..+..+++.||++++ |..-|+-|+ ..+..|.-|...|=+.-|++.|.
T Consensus 189 ~~Ld~lL~~sDiv~lh~PlT~eT~g~i~~~~~a~MK~gailIN~aRG~vVde 240 (324)
T COG0111 189 DSLDELLAEADILTLHLPLTPETRGLINAEELAKMKPGAILINAARGGVVDE 240 (324)
T ss_pred ccHHHHHhhCCEEEEcCCCCcchhcccCHHHHhhCCCCeEEEECCCcceecH
Confidence 347899999999765 777787765 45677777886666777766543
No 353
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=20.13 E-value=3.8e+02 Score=28.42 Aligned_cols=42 Identities=26% Similarity=0.282 Sum_probs=30.2
Q ss_pred HHHHHHHccEEEE--cCCCCC---CcHHHHHHHHhCCcEEEeCCccc
Q 046057 1035 SHLIYAGADFILV--PSIFEP---CGLTQLVAMRYGSIPVVRKTGGL 1076 (1198)
Q Consensus 1035 l~~iyA~ADi~Lv--PS~~Ep---fGLt~LEAMa~G~PvIvt~tGGl 1076 (1198)
+..+++.||++++ |..-|+ ++-..+.+|.-|...|-..-|++
T Consensus 85 l~ell~~aDiv~~~~plt~~T~~li~~~~l~~mk~ga~lvN~aRG~~ 131 (178)
T PF02826_consen 85 LDELLAQADIVSLHLPLTPETRGLINAEFLAKMKPGAVLVNVARGEL 131 (178)
T ss_dssp HHHHHHH-SEEEE-SSSSTTTTTSBSHHHHHTSTTTEEEEESSSGGG
T ss_pred hhhhcchhhhhhhhhccccccceeeeeeeeeccccceEEEeccchhh
Confidence 5688999999877 443344 55688999999987777777644
No 354
>PLN02778 3,5-epimerase/4-reductase
Probab=20.09 E-value=1.3e+02 Score=34.54 Aligned_cols=33 Identities=12% Similarity=0.148 Sum_probs=26.6
Q ss_pred CCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEE
Q 046057 706 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDI 748 (1198)
Q Consensus 706 ~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~V 748 (1198)
.+..|||++ +||.|.+=..|+++|.++||+|.+
T Consensus 6 ~~~~~kiLV----------tG~tGfiG~~l~~~L~~~g~~V~~ 38 (298)
T PLN02778 6 GSATLKFLI----------YGKTGWIGGLLGKLCQEQGIDFHY 38 (298)
T ss_pred CCCCCeEEE----------ECCCCHHHHHHHHHHHhCCCEEEE
Confidence 455699885 477788888899999999999864
Done!