Query 046057
Match_columns 1198
No_of_seqs 298 out of 2199
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 14:25:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046057.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046057hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 100.0 8.1E-66 2.8E-70 619.1 44.2 430 706-1196 6-511 (536)
2 1rzu_A Glycogen synthase 1; gl 100.0 1.9E-46 6.4E-51 438.5 38.7 431 710-1198 1-477 (485)
3 3fro_A GLGA glycogen synthase; 100.0 3.2E-46 1.1E-50 425.6 38.5 400 708-1198 1-432 (439)
4 2qzs_A Glycogen synthase; glyc 100.0 3.1E-45 1.1E-49 428.1 42.0 428 710-1197 1-477 (485)
5 2r60_A Glycosyl transferase, g 100.0 1.9E-40 6.6E-45 390.1 39.9 390 707-1197 5-460 (499)
6 3c48_A Predicted glycosyltrans 100.0 3.8E-40 1.3E-44 378.6 39.5 383 702-1197 13-426 (438)
7 3nb0_A Glycogen [starch] synth 100.0 1.3E-39 4.4E-44 393.9 32.6 418 712-1197 30-634 (725)
8 3s28_A Sucrose synthase 1; gly 100.0 1.1E-38 3.8E-43 398.6 34.3 405 708-1196 277-769 (816)
9 3okp_A GDP-mannose-dependent a 100.0 3E-37 1E-41 347.3 36.2 357 708-1197 3-380 (394)
10 2jjm_A Glycosyl transferase, g 100.0 2.3E-36 8E-41 343.5 36.6 359 710-1197 14-386 (394)
11 2x6q_A Trehalose-synthase TRET 100.0 2E-36 6.7E-41 346.5 31.4 362 708-1198 39-416 (416)
12 2iw1_A Lipopolysaccharide core 100.0 3.4E-37 1.2E-41 345.0 22.9 356 710-1197 1-372 (374)
13 3oy2_A Glycosyltransferase B73 100.0 9.3E-35 3.2E-39 331.8 33.6 369 710-1198 1-392 (413)
14 2gek_A Phosphatidylinositol ma 100.0 8.8E-35 3E-39 329.1 30.7 355 706-1197 17-384 (406)
15 2iuy_A Avigt4, glycosyltransfe 100.0 3.8E-35 1.3E-39 327.2 25.9 312 709-1198 3-337 (342)
16 2c4m_A Glycogen phosphorylase; 100.0 3.8E-30 1.3E-34 315.5 27.0 328 815-1197 263-720 (796)
17 2x0d_A WSAF; GT4 family, trans 100.0 1.9E-30 6.5E-35 302.3 20.7 313 707-1115 44-374 (413)
18 1f0k_A MURG, UDP-N-acetylgluco 100.0 5.9E-29 2E-33 278.8 25.0 339 709-1197 6-358 (364)
19 2hy7_A Glucuronosyltransferase 100.0 2.7E-29 9.1E-34 291.0 15.4 349 707-1196 12-379 (406)
20 1l5w_A Maltodextrin phosphoryl 100.0 2.3E-29 8E-34 308.6 15.3 331 815-1197 273-731 (796)
21 1uqt_A Alpha, alpha-trehalose- 99.9 4.5E-27 1.5E-31 279.6 24.6 298 818-1196 110-454 (482)
22 2vsy_A XCC0866; transferase, g 99.9 9.2E-27 3.1E-31 277.8 22.3 332 707-1197 203-560 (568)
23 2gj4_A Glycogen phosphorylase, 99.9 1.5E-26 5.1E-31 284.7 19.4 315 831-1197 320-755 (824)
24 3beo_A UDP-N-acetylglucosamine 99.9 9.7E-26 3.3E-30 253.2 20.7 274 819-1194 85-374 (375)
25 1vgv_A UDP-N-acetylglucosamine 99.9 3.1E-25 1.1E-29 250.4 22.4 284 819-1196 76-376 (384)
26 2bfw_A GLGA glycogen synthase; 99.9 9.3E-24 3.2E-28 217.7 19.8 167 913-1115 1-175 (200)
27 3t5t_A Putative glycosyltransf 99.9 5.6E-23 1.9E-27 244.3 25.5 280 831-1195 149-472 (496)
28 1v4v_A UDP-N-acetylglucosamine 99.9 4.9E-21 1.7E-25 216.2 24.6 271 819-1197 81-365 (376)
29 3qhp_A Type 1 capsular polysac 99.9 2.7E-21 9.1E-26 193.9 18.1 160 962-1188 2-166 (166)
30 2f9f_A First mannosyl transfer 99.8 6.6E-20 2.3E-24 187.7 16.1 135 960-1115 21-157 (177)
31 2xci_A KDO-transferase, 3-deox 99.8 1.5E-19 5.1E-24 207.5 19.5 229 821-1115 103-341 (374)
32 3otg_A CALG1; calicheamicin, T 99.8 3.5E-17 1.2E-21 186.6 23.6 161 961-1196 242-410 (412)
33 3dzc_A UDP-N-acetylglucosamine 99.7 4.3E-16 1.5E-20 180.4 24.8 282 817-1194 99-395 (396)
34 4fzr_A SSFS6; structural genom 99.7 6E-16 2.1E-20 176.7 18.1 153 961-1191 227-397 (398)
35 3ot5_A UDP-N-acetylglucosamine 99.7 2.1E-15 7.2E-20 175.2 21.8 276 817-1196 102-391 (403)
36 2iyf_A OLED, oleandomycin glyc 99.6 5.7E-14 2E-18 161.7 26.0 159 961-1195 232-400 (430)
37 3s2u_A UDP-N-acetylglucosamine 99.6 3.6E-13 1.2E-17 154.1 30.4 348 710-1193 3-355 (365)
38 3rhz_A GTF3, nucleotide sugar 99.6 2.3E-13 7.7E-18 155.3 23.8 210 829-1115 72-299 (339)
39 3oti_A CALG3; calicheamicin, T 99.6 4.4E-13 1.5E-17 153.2 25.8 154 961-1193 232-396 (398)
40 2c3v_A Alpha-amylase G-6; carb 99.5 1.2E-14 4E-19 138.4 8.8 82 268-359 3-86 (102)
41 3tsa_A SPNG, NDP-rhamnosyltran 99.5 8E-14 2.7E-18 158.3 16.4 159 961-1194 218-388 (391)
42 2c3v_A Alpha-amylase G-6; carb 99.5 2.4E-14 8.2E-19 136.3 7.8 81 444-540 4-86 (102)
43 3ia7_A CALG4; glycosysltransfe 99.5 3.6E-12 1.2E-16 144.3 26.6 160 961-1196 231-400 (402)
44 3rsc_A CALG2; TDP, enediyne, s 99.4 1.7E-11 6E-16 140.2 27.0 159 961-1195 247-414 (415)
45 2p6p_A Glycosyl transferase; X 99.4 6.2E-11 2.1E-15 134.4 29.5 119 962-1115 211-342 (384)
46 2laa_A Beta/alpha-amylase; SBD 99.4 3.4E-13 1.2E-17 128.8 8.6 78 449-541 3-82 (104)
47 2laa_A Beta/alpha-amylase; SBD 99.4 3.8E-13 1.3E-17 128.5 8.6 78 274-360 3-82 (104)
48 4hwg_A UDP-N-acetylglucosamine 99.4 1.9E-12 6.6E-17 149.8 12.8 247 815-1118 80-340 (385)
49 2yjn_A ERYCIII, glycosyltransf 99.2 5.3E-10 1.8E-14 130.0 21.5 155 962-1194 268-435 (441)
50 3h4t_A Glycosyltransferase GTF 99.1 4.1E-09 1.4E-13 121.5 23.9 124 961-1115 221-347 (404)
51 4amg_A Snogd; transferase, pol 99.0 3.6E-08 1.2E-12 111.8 24.5 97 961-1075 237-334 (400)
52 1ygp_A Yeast glycogen phosphor 99.0 1.3E-07 4.3E-12 117.2 30.6 346 831-1192 359-871 (879)
53 2iya_A OLEI, oleandomycin glyc 99.0 1.9E-07 6.4E-12 107.5 30.6 123 961-1115 255-384 (424)
54 1iir_A Glycosyltransferase GTF 98.9 1.9E-07 6.6E-12 107.6 24.4 119 961-1115 238-364 (415)
55 3q3e_A HMW1C-like glycosyltran 98.7 3.7E-08 1.2E-12 119.8 11.9 213 819-1080 339-556 (631)
56 1rrv_A Glycosyltransferase GTF 98.7 1.4E-06 4.8E-11 100.3 24.3 119 961-1115 237-365 (416)
57 2o6l_A UDP-glucuronosyltransfe 98.6 3.3E-07 1.1E-11 92.6 12.7 120 961-1115 21-149 (170)
58 4gyw_A UDP-N-acetylglucosamine 97.8 0.00049 1.7E-08 85.9 19.7 114 952-1072 514-629 (723)
59 2eef_A Protein phosphatase 1, 97.7 1.8E-05 6E-10 80.9 3.7 80 462-542 55-139 (156)
60 2eef_A Protein phosphatase 1, 97.6 3.9E-05 1.3E-09 78.4 4.8 75 286-360 54-138 (156)
61 3tov_A Glycosyl transferase fa 97.2 0.069 2.4E-06 60.6 26.0 111 950-1071 174-286 (349)
62 2djm_A Glucoamylase A; beta sa 97.2 0.00031 1.1E-08 67.5 5.6 74 463-540 29-106 (106)
63 3hbm_A UDP-sugar hydrolase; PS 97.0 0.12 4.2E-06 57.3 24.1 93 963-1072 159-251 (282)
64 2djm_A Glucoamylase A; beta sa 96.8 0.001 3.5E-08 63.9 5.0 69 288-359 29-106 (106)
65 1psw_A ADP-heptose LPS heptosy 96.3 0.012 4.3E-07 65.5 10.6 116 948-1071 167-286 (348)
66 2qlv_B Protein SIP2, protein S 93.2 0.28 9.6E-06 53.8 9.8 80 451-542 4-87 (252)
67 2c1x_A UDP-glucose flavonoid 3 92.5 0.59 2E-05 54.9 12.1 141 951-1115 261-407 (456)
68 2acv_A Triterpene UDP-glucosyl 91.6 1.8 6E-05 50.9 14.6 145 950-1115 265-420 (463)
69 2qlv_B Protein SIP2, protein S 91.5 0.33 1.1E-05 53.3 7.7 58 276-343 4-61 (252)
70 1z0n_A 5'-AMP-activated protei 90.8 0.9 3.1E-05 42.5 8.9 58 447-520 7-64 (96)
71 2jzc_A UDP-N-acetylglucosamine 90.2 0.4 1.4E-05 51.6 6.7 45 1023-1073 115-160 (224)
72 4aee_A Alpha amylase, catalyti 89.8 1.6 5.6E-05 54.1 12.7 58 277-344 19-76 (696)
73 2gt1_A Lipopolysaccharide hept 89.5 1.3 4.6E-05 48.8 10.6 98 962-1071 179-278 (326)
74 3hbf_A Flavonoid 3-O-glucosylt 89.2 1.8 6.3E-05 51.0 12.0 132 961-1115 273-409 (454)
75 2vch_A Hydroquinone glucosyltr 86.7 3.8 0.00013 48.4 12.6 136 961-1115 268-424 (480)
76 3nme_A Ptpkis1 protein, SEX4 g 86.3 0.75 2.6E-05 51.3 5.9 58 276-343 170-227 (294)
77 2pq6_A UDP-glucuronosyl/UDP-gl 86.0 7.3 0.00025 45.8 14.5 130 962-1115 296-434 (482)
78 1z0n_A 5'-AMP-activated protei 85.5 2.3 8E-05 39.7 8.0 46 290-343 19-64 (96)
79 3nme_A Ptpkis1 protein, SEX4 g 85.4 2.1 7.1E-05 47.7 8.9 84 451-546 170-258 (294)
80 2j43_A Spydx; family 41, pullu 83.6 30 0.001 37.0 16.6 163 275-521 2-178 (219)
81 4aee_A Alpha amylase, catalyti 73.3 4.8 0.00017 49.9 7.5 58 451-520 18-75 (696)
82 2c3g_A Alpha-amylase G-6; carb 73.2 7.4 0.00025 36.8 6.9 59 274-344 3-68 (98)
83 1ac0_A Glucoamylase; hydrolase 64.5 7.4 0.00025 36.7 5.1 80 275-356 4-91 (108)
84 3h5i_A Response regulator/sens 57.9 1.2E+02 0.0041 28.1 12.9 107 991-1115 5-119 (140)
85 1ac0_A Glucoamylase; hydrolase 57.3 4.9 0.00017 37.9 2.4 83 450-537 4-91 (108)
86 3to5_A CHEY homolog; alpha(5)b 57.3 60 0.0021 31.6 10.4 112 987-1115 8-128 (134)
87 4b4o_A Epimerase family protei 55.8 7.2 0.00024 42.2 3.8 33 710-752 1-33 (298)
88 3l7i_A Teichoic acid biosynthe 53.3 1.6E+02 0.0056 36.2 15.8 156 880-1071 475-640 (729)
89 4aef_A Neopullulanase (alpha-a 51.6 16 0.00056 44.6 6.4 48 465-520 25-72 (645)
90 2zay_A Response regulator rece 50.6 94 0.0032 28.9 10.4 107 991-1115 8-123 (147)
91 3kht_A Response regulator; PSI 50.1 83 0.0028 29.2 9.9 109 991-1115 5-123 (144)
92 2z0b_A GDE5, KIAA1434, putativ 49.3 26 0.0009 34.3 6.3 64 451-517 7-75 (131)
93 2pln_A HP1043, response regula 49.2 89 0.003 28.7 9.9 104 991-1115 18-128 (137)
94 3nbm_A PTS system, lactose-spe 48.7 24 0.00083 33.6 5.7 42 707-754 4-45 (108)
95 2f5x_A BUGD; periplasmic bindi 46.9 2E+02 0.007 31.8 13.9 155 963-1177 112-278 (312)
96 3auf_A Glycinamide ribonucleot 46.5 71 0.0024 34.2 9.6 131 708-891 21-157 (229)
97 3cg4_A Response regulator rece 46.2 1.8E+02 0.006 26.7 11.8 108 990-1115 6-122 (142)
98 3nvt_A 3-deoxy-D-arabino-heptu 45.2 1.1E+02 0.0037 35.4 11.5 101 965-1073 144-257 (385)
99 3grc_A Sensor protein, kinase; 45.1 1.8E+02 0.0063 26.5 12.5 108 991-1115 6-122 (140)
100 2vn4_A Glucoamylase; hydrolase 41.2 76 0.0026 38.8 9.9 90 446-542 490-584 (599)
101 2j44_A SPNDX, alkaline amylopu 41.0 3.5E+02 0.012 28.7 17.1 178 277-542 3-194 (217)
102 2dvz_A BUGE, putative exported 40.7 3.6E+02 0.012 29.8 14.7 156 963-1176 116-281 (314)
103 2j48_A Two-component sensor ki 37.5 1.7E+02 0.0057 25.4 9.3 103 992-1115 2-113 (119)
104 1lss_A TRK system potassium up 37.0 26 0.00089 32.8 4.0 32 709-751 4-35 (140)
105 3h1g_A Chemotaxis protein CHEY 36.5 2.4E+02 0.0083 25.5 11.5 108 992-1115 6-122 (129)
106 3heb_A Response regulator rece 36.2 2.7E+02 0.0092 25.9 11.3 109 991-1115 4-130 (152)
107 3hdv_A Response regulator; PSI 36.0 2.4E+02 0.0082 25.6 10.6 108 991-1115 7-122 (136)
108 4gi5_A Quinone reductase; prot 35.8 42 0.0014 37.1 5.9 40 707-750 20-60 (280)
109 2ya1_A Putative alkaline amylo 35.7 4.8E+02 0.017 33.8 16.5 89 271-370 2-101 (1014)
110 1k66_A Phytochrome response re 35.3 2.3E+02 0.008 25.8 10.4 109 991-1115 6-133 (149)
111 3cnb_A DNA-binding response re 35.1 2.6E+02 0.0088 25.4 11.3 108 991-1115 8-125 (143)
112 3gt7_A Sensor protein; structu 35.1 1.5E+02 0.005 28.1 9.1 107 991-1115 7-122 (154)
113 4g65_A TRK system potassium up 34.8 14 0.00048 43.6 2.0 63 1007-1073 268-333 (461)
114 2z0b_A GDE5, KIAA1434, putativ 34.4 53 0.0018 32.1 5.8 54 613-671 7-66 (131)
115 1jbe_A Chemotaxis protein CHEY 34.2 2.5E+02 0.0087 25.0 10.6 108 991-1115 4-120 (128)
116 2qpq_A Protein BUG27; alpha/be 33.7 4.4E+02 0.015 28.9 13.8 157 963-1175 103-267 (301)
117 1k68_A Phytochrome response re 33.6 2.7E+02 0.0091 25.1 11.9 108 992-1115 3-126 (140)
118 2ywr_A Phosphoribosylglycinami 32.5 89 0.0031 33.0 7.6 129 710-891 2-136 (216)
119 3jte_A Response regulator rece 32.4 2.9E+02 0.01 25.2 12.3 106 992-1115 4-118 (143)
120 2pq6_A UDP-glucuronosyl/UDP-gl 32.4 40 0.0014 39.5 5.3 38 709-752 8-45 (482)
121 1zco_A 2-dehydro-3-deoxyphosph 32.0 2.4E+02 0.0083 30.7 11.1 101 965-1073 25-138 (262)
122 3cg0_A Response regulator rece 31.1 3E+02 0.01 24.9 12.4 107 991-1115 9-123 (140)
123 2vch_A Hydroquinone glucosyltr 30.9 36 0.0012 40.0 4.6 40 708-753 5-45 (480)
124 2qzj_A Two-component response 30.8 3E+02 0.01 25.3 10.3 107 991-1115 4-116 (136)
125 4dad_A Putative pilus assembly 30.4 1.8E+02 0.0061 26.9 8.7 109 991-1115 20-136 (146)
126 4aef_A Neopullulanase (alpha-a 30.2 52 0.0018 40.2 6.0 48 290-343 25-72 (645)
127 2qr3_A Two-component system re 29.9 2.3E+02 0.008 25.7 9.3 106 992-1115 4-121 (140)
128 4eib_A Glucoamylase; beta barr 29.7 95 0.0033 29.9 6.4 52 463-517 49-104 (109)
129 3l4b_C TRKA K+ channel protien 29.0 34 0.0012 35.3 3.6 31 710-751 1-31 (218)
130 3bbn_B Ribosomal protein S2; s 29.0 1.3E+02 0.0044 32.4 8.1 38 1042-1080 158-196 (231)
131 2g1u_A Hypothetical protein TM 28.8 48 0.0016 32.3 4.4 37 705-752 15-51 (155)
132 3eul_A Possible nitrate/nitrit 28.2 3.6E+02 0.012 25.0 10.7 109 991-1115 15-130 (152)
133 3hly_A Flavodoxin-like domain; 28.0 56 0.0019 32.4 4.8 37 710-751 1-37 (161)
134 2qvg_A Two component response 27.7 3.4E+02 0.012 24.7 10.1 109 991-1115 7-130 (143)
135 1qkk_A DCTD, C4-dicarboxylate 27.7 3.8E+02 0.013 25.0 10.8 106 992-1115 4-116 (155)
136 2qyt_A 2-dehydropantoate 2-red 27.5 28 0.00096 37.8 2.7 36 705-751 4-45 (317)
137 3m6m_D Sensory/regulatory prot 27.4 3E+02 0.01 25.6 9.8 108 991-1115 14-131 (143)
138 3hzh_A Chemotaxis response reg 27.2 4E+02 0.014 25.1 11.4 106 992-1115 37-152 (157)
139 2vns_A Metalloreductase steap3 27.0 35 0.0012 35.6 3.2 33 708-751 27-59 (215)
140 3kjh_A CO dehydrogenase/acetyl 26.6 51 0.0018 33.9 4.4 35 710-752 1-37 (254)
141 3lte_A Response regulator; str 26.5 3.1E+02 0.011 24.5 9.5 108 991-1115 6-120 (132)
142 3ew7_A LMO0794 protein; Q8Y8U8 26.5 50 0.0017 33.3 4.3 33 710-752 1-33 (221)
143 4f3y_A DHPR, dihydrodipicolina 26.4 78 0.0027 34.7 6.0 43 1035-1077 67-109 (272)
144 3fwz_A Inner membrane protein 25.8 51 0.0017 31.7 3.9 33 709-752 7-39 (140)
145 3t6k_A Response regulator rece 25.8 3.9E+02 0.013 24.5 10.8 106 992-1115 5-119 (136)
146 3en0_A Cyanophycinase; serine 25.7 3E+02 0.01 30.4 10.6 111 962-1075 27-155 (291)
147 3tqr_A Phosphoribosylglycinami 25.6 2.5E+02 0.0086 29.7 9.6 131 707-890 3-138 (215)
148 3gd5_A Otcase, ornithine carba 25.5 4.2E+02 0.015 29.8 11.9 128 882-1050 102-234 (323)
149 3i42_A Response regulator rece 25.2 3.6E+02 0.012 24.0 10.5 105 992-1115 4-117 (127)
150 2j73_A Pullulanase; alpha-gluc 25.2 81 0.0028 29.6 5.1 78 451-542 4-84 (103)
151 3h2s_A Putative NADH-flavin re 25.2 55 0.0019 33.2 4.3 33 710-752 1-33 (224)
152 3hdg_A Uncharacterized protein 25.1 3.2E+02 0.011 24.7 9.4 108 991-1115 7-120 (137)
153 2rdm_A Response regulator rece 25.1 3.7E+02 0.013 24.0 12.7 105 991-1115 5-118 (132)
154 1wcv_1 SOJ, segregation protei 25.0 67 0.0023 33.9 5.1 38 708-751 4-43 (257)
155 2j73_A Pullulanase; alpha-gluc 24.8 1.3E+02 0.0044 28.2 6.4 76 276-360 4-83 (103)
156 4hb9_A Similarities with proba 24.6 44 0.0015 37.0 3.7 29 710-749 2-30 (412)
157 3f6r_A Flavodoxin; FMN binding 24.4 83 0.0028 30.2 5.2 38 710-752 2-39 (148)
158 2ya1_A Putative alkaline amylo 24.3 4.6E+02 0.016 34.0 13.4 93 446-552 2-101 (1014)
159 1wzl_A Alpha-amylase II; pullu 24.3 1E+02 0.0036 37.0 7.1 68 448-518 18-87 (585)
160 3n53_A Response regulator rece 24.3 4.1E+02 0.014 24.2 11.5 105 992-1115 4-117 (140)
161 3ty2_A 5'-nucleotidase SURE; s 24.2 62 0.0021 35.6 4.6 40 707-754 9-48 (261)
162 2i6u_A Otcase, ornithine carba 24.2 5.7E+02 0.02 28.5 12.6 129 882-1050 93-226 (307)
163 2gwr_A DNA-binding response re 24.1 5.7E+02 0.02 25.9 12.1 109 992-1118 6-120 (238)
164 3hv2_A Response regulator/HD d 24.1 4.4E+02 0.015 24.5 10.4 65 1042-1115 59-128 (153)
165 1z82_A Glycerol-3-phosphate de 23.9 49 0.0017 36.7 3.9 33 708-751 13-45 (335)
166 2rjn_A Response regulator rece 23.9 4.3E+02 0.015 24.5 10.2 108 991-1115 7-121 (154)
167 3c3m_A Response regulator rece 23.8 4.2E+02 0.014 24.2 11.5 106 992-1115 4-118 (138)
168 3av3_A Phosphoribosylglycinami 23.8 2.9E+02 0.0098 29.0 9.6 129 710-891 4-138 (212)
169 2j44_A SPNDX, alkaline amylopu 23.4 3.3E+02 0.011 28.9 9.9 90 260-360 96-193 (217)
170 1vs1_A 3-deoxy-7-phosphoheptul 23.2 3.3E+02 0.011 29.9 10.2 100 968-1073 42-153 (276)
171 4e7p_A Response regulator; DNA 23.2 2.9E+02 0.01 25.7 8.8 64 1042-1115 67-135 (150)
172 4ep1_A Otcase, ornithine carba 22.8 5.1E+02 0.017 29.4 11.9 127 882-1050 124-256 (340)
173 1kjq_A GART 2, phosphoribosylg 22.5 78 0.0027 35.4 5.2 41 701-752 3-43 (391)
174 1f4p_A Flavodoxin; electron tr 22.5 78 0.0027 30.3 4.6 37 710-751 1-37 (147)
175 3lxy_A 4-hydroxythreonine-4-ph 22.3 1.5E+02 0.005 33.8 7.3 137 933-1115 178-323 (334)
176 3kcq_A Phosphoribosylglycinami 22.2 2.3E+02 0.0079 30.0 8.4 127 706-890 5-137 (215)
177 3ijp_A DHPR, dihydrodipicolina 21.8 80 0.0027 35.1 5.0 43 1035-1077 82-124 (288)
178 2b5u_A Colicin E3; high resolu 21.5 2.6E+02 0.0088 33.3 9.1 24 358-381 286-309 (551)
179 2j43_A Spydx; family 41, pullu 21.4 4.5E+02 0.015 27.9 10.5 78 273-358 109-194 (219)
180 2hy5_A Putative sulfurtransfer 21.4 1.4E+02 0.0047 28.6 6.1 39 710-751 1-40 (130)
181 1jkx_A GART;, phosphoribosylgl 21.4 3.7E+02 0.013 28.2 9.8 129 710-891 1-135 (212)
182 1qho_A Alpha-amylase; glycosid 21.4 1.6E+02 0.0055 36.2 8.1 87 448-542 577-674 (686)
183 1kjn_A MTH0777; hypotethical p 21.4 1.3E+02 0.0045 30.6 5.8 41 706-750 3-43 (157)
184 3bmv_A Cyclomaltodextrin gluca 21.2 1.4E+02 0.0047 36.8 7.4 89 448-542 579-671 (683)
185 2w37_A Ornithine carbamoyltran 21.2 5.4E+02 0.018 29.4 11.7 129 882-1050 121-254 (359)
186 3r0j_A Possible two component 21.1 6.8E+02 0.023 25.6 12.6 109 991-1117 23-138 (250)
187 1vr6_A Phospho-2-dehydro-3-deo 20.9 5.6E+02 0.019 29.2 11.8 103 965-1073 107-221 (350)
188 3c97_A Signal transduction his 20.9 4.8E+02 0.016 23.7 11.8 103 992-1115 11-125 (140)
189 1ks9_A KPA reductase;, 2-dehyd 20.5 62 0.0021 34.4 3.7 32 710-752 1-32 (291)
190 1aj0_A DHPS, dihydropteroate s 20.4 6.9E+02 0.024 27.4 12.2 114 962-1081 14-149 (282)
191 2ew2_A 2-dehydropantoate 2-red 20.3 62 0.0021 34.8 3.7 32 709-751 3-34 (316)
192 3f6c_A Positive transcription 20.0 4.7E+02 0.016 23.4 10.2 108 992-1115 2-115 (134)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=8.1e-66 Score=619.14 Aligned_cols=430 Identities=32% Similarity=0.555 Sum_probs=362.8
Q ss_pred CCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceec
Q 046057 706 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVE 785 (1198)
Q Consensus 706 ~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~ 785 (1198)
.+..||||||++|++|++|+|||++++.+|++||+++||+|.||+|.|+.+.............+.+....++++.....
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKR 85 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEET
T ss_pred CCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEEC
Confidence 46789999999999999999999999999999999999999999999987653221111111222333456778888889
Q ss_pred CeEEEEeCCCCCcccc------ccccC------CCCchhhHHHHHHHHHHHHHhcC-----------CCceEEEECCCCh
Q 046057 786 GLSVYFLEPQNGFFSK------GCVYG------CNNDKERFAFFCHAALEFLLQGG-----------FHPDIIHCHDWSS 842 (1198)
Q Consensus 786 Gv~v~~l~~~~~~f~r------g~iYg------~~dd~~Rf~~F~~aale~L~~~~-----------~~PDVIH~Hdw~t 842 (1198)
|+.+|+|+.+. +|.+ +.+|+ +.|+.+||.+||++++++++..+ ..+||+|||||++
T Consensus 86 gv~~y~id~~~-~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t 164 (536)
T 3vue_A 86 GVDRVFIDHPS-FLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHT 164 (536)
T ss_dssp TEEEEEEECTT-TTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGG
T ss_pred CceEEEecChh-hhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchH
Confidence 99999999763 4443 34665 46889999999999999987643 2467999999999
Q ss_pred hHHHHHHHHhhhhcC-CCCCeEEEEecCCchh-----------------------------------hhHHHHHHhccCE
Q 046057 843 APVAWLFKDHYVHYG-LSKARIVFTIHNLEFG-----------------------------------THHIGKAMTYADK 886 (1198)
Q Consensus 843 a~va~llk~~y~~~g-l~~ipvV~tIHn~~~~-----------------------------------~~li~~~~~~AD~ 886 (1198)
++++.+++..+...+ +.++|+|+||||+.++ .++++.++.+||.
T Consensus 165 ~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~ 244 (536)
T 3vue_A 165 GPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADR 244 (536)
T ss_dssp STHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSE
T ss_pred HHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccE
Confidence 999999998775443 3589999999997542 2478889999999
Q ss_pred EEEeCHHHHHHHhCCCC------CCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCC-C
Q 046057 887 ATTVSHTYSKEVAGDPA------IAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLR-K 959 (1198)
Q Consensus 887 VitVS~~~a~el~~~~~------l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~-~ 959 (1198)
|+|||++|++++..... ...+..++.+|+||||.+.|+|.+|.+++.+|+....+.+|..+|..|++++||+ +
T Consensus 245 v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d 324 (536)
T 3vue_A 245 VLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVD 324 (536)
T ss_dssp EEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCC
T ss_pred EEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCC
Confidence 99999999999875321 1234678999999999999999999999999999988899999999999999998 4
Q ss_pred CCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 960 SDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 960 ~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
++.|+|++||||+++||+++|++|+.++.+++.+|+|+|.| +......++.++..+ ++++.+++.++.++++.+|
T Consensus 325 ~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G-~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~ 399 (536)
T 3vue_A 325 RKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTG-KKKFEKLLKSMEEKY----PGKVRAVVKFNAPLAHLIM 399 (536)
T ss_dssp TTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCB-CHHHHHHHHHHHHHS----TTTEEEECSCCHHHHHHHH
T ss_pred CCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEecc-CchHHHHHHHHHhhc----CCceEEEEeccHHHHHHHH
Confidence 68899999999999999999999999999889999999998 555566677666654 4689999999999999999
Q ss_pred HHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEE----------EEcCCCHHH
Q 046057 1040 AGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGF----------SFDGADIAG 1109 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~----------lf~~~D~~~ 1109 (1198)
++||++|+||++||||++++|||+||+|||+|++||++|+|.|+ .||| +|++.|+++
T Consensus 400 ~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg-------------~~G~~~~~~~~~g~l~~~~d~~~ 466 (536)
T 3vue_A 400 AGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEG-------------KTGFHMGRLSVDCKVVEPSDVKK 466 (536)
T ss_dssp HHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBT-------------TTEEECCCCCSCTTCCCHHHHHH
T ss_pred HhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCC-------------CCccccccCCCceeEECCCCHHH
Confidence 99999999999999999999999999999999999999999997 7777 778889999
Q ss_pred HHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHH
Q 046057 1110 VDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDY 1189 (1198)
Q Consensus 1110 La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~y 1189 (1198)
|+++|. ++|..+ +++. |+++++++|+++|||+++|++|
T Consensus 467 la~ai~----------------------------------------ral~~~-~~~~-~~~~~~~am~~~fSW~~~A~~y 504 (536)
T 3vue_A 467 VAATLK----------------------------------------RAIKVV-GTPA-YEEMVRNCMNQDLSWKGPAKNW 504 (536)
T ss_dssp HHHHHH----------------------------------------HHHHHT-TSHH-HHHHHHHHHHSCCSSHHHHHHH
T ss_pred HHHHHH----------------------------------------HHHHhc-CcHH-HHHHHHHHHHhcCCHHHHHHHH
Confidence 999999 888765 5555 5889999999999999999999
Q ss_pred HHHHHHH
Q 046057 1190 MELYRAA 1196 (1198)
Q Consensus 1190 ielY~~a 1196 (1198)
+++|+++
T Consensus 505 ~~ly~~L 511 (536)
T 3vue_A 505 ENVLLGL 511 (536)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9999875
No 2
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=1.9e-46 Score=438.46 Aligned_cols=431 Identities=32% Similarity=0.557 Sum_probs=332.1
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCccccccccccc--ccccCCCceeEEeeceecCe
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYN--RSYHWGGTEIKVWFGKVEGL 787 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~--~~~~~g~~~i~V~~~~~~Gv 787 (1198)
|||++|+.++.|....||+++++..|+++|+++||+|+|+++.+...... ...+... .....+ ....+......|+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~gv 78 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAA-VTDPVKCFEFTDLLG-EKADLLEVQHERL 78 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHH-CCSCEEEEEESCSSS-CCEEEEEEEETTE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccccccccc-ccccceeEEEEEecC-CeEEEEEEEecCc
Confidence 89999999999965689999999999999999999999999875421100 0000000 000011 1123333345789
Q ss_pred EEEEeCCCCCccccc-cccC------CCCchhhHHHHHHHHHHHHHhc--CCCceEEEECCCChhHHHHHHHHhhhhcCC
Q 046057 788 SVYFLEPQNGFFSKG-CVYG------CNNDKERFAFFCHAALEFLLQG--GFHPDIIHCHDWSSAPVAWLFKDHYVHYGL 858 (1198)
Q Consensus 788 ~v~~l~~~~~~f~rg-~iYg------~~dd~~Rf~~F~~aale~L~~~--~~~PDVIH~Hdw~ta~va~llk~~y~~~gl 858 (1198)
.++.+... .++.+. .+|+ ..++..++.+|+.++.++++.. ..+|||||+|+|.+++++.+++.. ..
T Consensus 79 ~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~----~~ 153 (485)
T 1rzu_A 79 DLLILDAP-AYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYA----ET 153 (485)
T ss_dssp EEEEEECH-HHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHS----SS
T ss_pred eEEEEeCh-HHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhc----cc
Confidence 99888643 222221 1333 2355678888888888888754 568999999998877777666543 11
Q ss_pred CCCeEEEEecCCchh----------------------------hhHHHHHHhccCEEEEeCHHHHHHHhCC--C-----C
Q 046057 859 SKARIVFTIHNLEFG----------------------------THHIGKAMTYADKATTVSHTYSKEVAGD--P-----A 903 (1198)
Q Consensus 859 ~~ipvV~tIHn~~~~----------------------------~~li~~~~~~AD~VitVS~~~a~el~~~--~-----~ 903 (1198)
.++|+|+|+|+..+. ..+++..+..+|.++++|+.+++.+... + .
T Consensus 154 ~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~ 233 (485)
T 1rzu_A 154 PEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGV 233 (485)
T ss_dssp CCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHH
T ss_pred CCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhHHHHHhccccCcchHHH
Confidence 389999999996421 1366778899999999999999988531 1 0
Q ss_pred CCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHH
Q 046057 904 IAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHA 983 (1198)
Q Consensus 904 l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleA 983 (1198)
++....++.+|+||||.+.|.|..+..++..|...++ +++..++..+++++|++..+.++|+++||+.++||++.+++|
T Consensus 234 ~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a 312 (485)
T 1rzu_A 234 IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEA 312 (485)
T ss_dssp HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTT
T ss_pred HHhhcCCceEEcCCCcccccCCcccccccccccccch-hhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHH
Confidence 1123578999999999999999888778888887764 788888999999999985336799999999999999999999
Q ss_pred HHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHH
Q 046057 984 IWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMR 1063 (1198)
Q Consensus 984 l~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa 1063 (1198)
+..+.+++++|+|+|+| +..+.+.+++++.+++ ++|.++.+++.+.+..+|+.||++|+||.+|+||++++|||+
T Consensus 313 ~~~l~~~~~~l~ivG~g-~~~~~~~l~~~~~~~~----~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma 387 (485)
T 1rzu_A 313 VDEIVSLGGRLVVLGAG-DVALEGALLAAASRHH----GRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALR 387 (485)
T ss_dssp HHHHHHTTCEEEEEECB-CHHHHHHHHHHHHHTT----TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHH
T ss_pred HHHHHhcCceEEEEeCC-chHHHHHHHHHHHhCC----CcEEEecCCCHHHHHHHHhcCCEEEECcccCCCCHHHHHHHH
Confidence 99998779999999998 4446788899998764 579865666888889999999999999999999999999999
Q ss_pred hCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccc
Q 046057 1064 YGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPF 1143 (1198)
Q Consensus 1064 ~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1143 (1198)
||+|||++++||++|+|.+++++.. .....+|++|++.|+++|+++|.
T Consensus 388 ~G~PvI~s~~gg~~e~v~~~~~~~~----~~~~~~G~l~~~~d~~~la~~i~---------------------------- 435 (485)
T 1rzu_A 388 YGCIPVVARTGGLADTVIDANHAAL----ASKAATGVQFSPVTLDGLKQAIR---------------------------- 435 (485)
T ss_dssp HTCEEEEESSHHHHHHCCBCCHHHH----HTTCCCBEEESSCSHHHHHHHHH----------------------------
T ss_pred CCCCEEEeCCCChhheecccccccc----cccCCcceEeCCCCHHHHHHHHH----------------------------
Confidence 9999999999999999987411000 00115899999999999998877
Q ss_pred cccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHhC
Q 046057 1144 KQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAARK 1198 (1198)
Q Consensus 1144 ~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~a~K 1198 (1198)
+++.. +++++.+.+++++++++.|||+.++++|+++|+++++
T Consensus 436 ------------~ll~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~~~ 477 (485)
T 1rzu_A 436 ------------RTVRY-YHDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLIS 477 (485)
T ss_dssp ------------HHHHH-HTCHHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC
T ss_pred ------------HHHHH-hCCHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhC
Confidence 55542 2688888999999988899999999999999998763
No 3
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=3.2e-46 Score=425.58 Aligned_cols=400 Identities=25% Similarity=0.393 Sum_probs=323.5
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCe
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGL 787 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv 787 (1198)
++|||++|+.++.| ...||+++++..|+++|+++||+|+|++|.+..........+.. ........++.....|+
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~gv 75 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRV----FGEEVQVKVSYEERGNL 75 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEE----TTEEEEEEEEEEEETTE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccc----cCcccceeeeeccCCCc
Confidence 47999999999999 57899999999999999999999999999876544322111111 00122334455567899
Q ss_pred EEEEeCCCCCccccccccC-CCCc-hhhHHHHHHHHHHHHHhc---CCCceEEEECCCChhHHHHHHHHhhhhcCCCCCe
Q 046057 788 SVYFLEPQNGFFSKGCVYG-CNND-KERFAFFCHAALEFLLQG---GFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKAR 862 (1198)
Q Consensus 788 ~v~~l~~~~~~f~rg~iYg-~~dd-~~Rf~~F~~aale~L~~~---~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ip 862 (1198)
.++.++. .+|.+..+|+ ..++ ..++..|+.++..+++.. ..+|||||+|+|.+++++.+++... ++|
T Consensus 76 ~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~------~~~ 147 (439)
T 3fro_A 76 RIYRIGG--GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYF------KIP 147 (439)
T ss_dssp EEEEEES--GGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHH------CCC
T ss_pred eEEEecc--hhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhcc------CCC
Confidence 9999986 5667766776 4455 778888999999988876 6799999999999888888777554 899
Q ss_pred EEEEecCCchh--------------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCC
Q 046057 863 IVFTIHNLEFG--------------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDM 922 (1198)
Q Consensus 863 vV~tIHn~~~~--------------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~ 922 (1198)
+|+++|+.... ..+.+..+..+|.++++|+.+++... +.++....++.+|+||+|.+.
T Consensus 148 ~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~--~~~~~~~~~i~vi~ngvd~~~ 225 (439)
T 3fro_A 148 AVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEW--GFFRNFEGKITYVFNGIDCSF 225 (439)
T ss_dssp EEEEESCCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTH--HHHGGGTTSEEECCCCCCTTT
T ss_pred EEEEecccccccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHh--hhhhhcCCceeecCCCCCchh
Confidence 99999998532 14667788999999999999988743 222344679999999999999
Q ss_pred CCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCC-CccCHHHHHHHHHHhhc----CCcEEEEE
Q 046057 923 WDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLT-HQKGIHLIKHAIWRTLD----RGGQVVLL 997 (1198)
Q Consensus 923 ~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~-~qKGidlIleAl~~ll~----~~~qLVIv 997 (1198)
|.|..- ...+...+..+++++|++. + ++|+++||+. ++||++.+++|+..+.+ ++++|+|+
T Consensus 226 ~~~~~~------------~~~~~~~~~~~~~~~~~~~-~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~ 291 (439)
T 3fro_A 226 WNESYL------------TGSRDERKKSLLSKFGMDE-G-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII 291 (439)
T ss_dssp SCGGGS------------CSCHHHHHHHHHHHHTCCS-C-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEE
T ss_pred cCcccc------------cchhhhhHHHHHHHcCCCC-C-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEE
Confidence 887311 1245567889999999973 5 9999999999 99999999999999986 68999999
Q ss_pred ecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccc
Q 046057 998 GSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLY 1077 (1198)
Q Consensus 998 Gsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~ 1077 (1198)
|+|+ ..+...+++++++++ +.+.|.|.++.+.+..+|+.||++|+||.+|+||++++|||+||+|||++++||+.
T Consensus 292 G~g~-~~~~~~l~~~~~~~~----~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~ 366 (439)
T 3fro_A 292 GKGD-PELEGWARSLEEKHG----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLR 366 (439)
T ss_dssp CCCC-HHHHHHHHHHHHHCT----TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHH
T ss_pred cCCC-hhHHHHHHHHHhhcC----CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcc
Confidence 9984 455688899998775 46777777899999999999999999999999999999999999999999999999
Q ss_pred ccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHH
Q 046057 1078 DTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRA 1157 (1198)
Q Consensus 1078 E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA 1157 (1198)
|++.+ .+|+++++.|+++++++|. ++
T Consensus 367 e~~~~--------------~~g~~~~~~d~~~la~~i~----------------------------------------~l 392 (439)
T 3fro_A 367 DIITN--------------ETGILVKAGDPGELANAIL----------------------------------------KA 392 (439)
T ss_dssp HHCCT--------------TTCEEECTTCHHHHHHHHH----------------------------------------HH
T ss_pred eeEEc--------------CceEEeCCCCHHHHHHHHH----------------------------------------HH
Confidence 99975 4899999999999997776 44
Q ss_pred HHHHhcCHHHHHHHHHHHHH--hcCChHHHHHHHHHHHHHHhC
Q 046057 1158 ISAYYDGREWLNSLCKTVME--QDWSWNRPALDYMELYRAARK 1198 (1198)
Q Consensus 1158 I~~l~~~~e~~~~L~~~am~--qdfSW~~~A~~yielY~~a~K 1198 (1198)
++. +++.+.++++++.+ ++|||+.++++|+++|+++++
T Consensus 393 l~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 393 LEL---SRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp HHH---TTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred Hhc---CHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 421 56666777777743 679999999999999998753
No 4
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=3.1e-45 Score=428.13 Aligned_cols=428 Identities=33% Similarity=0.603 Sum_probs=327.4
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccc-cCCCceeEEeeceecCeE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSY-HWGGTEIKVWFGKVEGLS 788 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~-~~g~~~i~V~~~~~~Gv~ 788 (1198)
|||++|+.++.|....||+++++..|+++|+++||+|+|+++.+...... .........+ ..++ ...+......|+.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~gv~ 78 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRG-VTDAQVVSRRDTFAG-HITLLFGHYNGVG 78 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHH-CTTCEEEEEECCTTC-CEEEEEEEETTEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccc-cccceeEEEecccCC-cEEEEEEEECCcE
Confidence 89999999999975689999999999999999999999999874321100 0000000000 0111 1222223357888
Q ss_pred EEEeCCCCCcccccc-ccC------CCCchhhHHHHHHHHHHHHHhcC--CCceEEEECCCChhHHHHHHHHhhhhcCCC
Q 046057 789 VYFLEPQNGFFSKGC-VYG------CNNDKERFAFFCHAALEFLLQGG--FHPDIIHCHDWSSAPVAWLFKDHYVHYGLS 859 (1198)
Q Consensus 789 v~~l~~~~~~f~rg~-iYg------~~dd~~Rf~~F~~aale~L~~~~--~~PDVIH~Hdw~ta~va~llk~~y~~~gl~ 859 (1198)
++.+... .++.+.. +|+ +.++..++.+++..+.++++... .+|||||+|+|.+++++.+++.. ..
T Consensus 79 v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~-----~~ 152 (485)
T 2qzs_A 79 IYLIDAP-HLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAAR-----GR 152 (485)
T ss_dssp EEEEECH-HHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHT-----TC
T ss_pred EEEEeCh-hhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhc-----cC
Confidence 8888643 1222222 332 23556678788888878776543 68999999999887777666521 13
Q ss_pred CCeEEEEecCCchh----------------------------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCC-----
Q 046057 860 KARIVFTIHNLEFG----------------------------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAP----- 906 (1198)
Q Consensus 860 ~ipvV~tIHn~~~~----------------------------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~----- 906 (1198)
++|+|+|+|+..+. ..+++..+..+|.++++|+.+++.+... .++.
T Consensus 153 ~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~-~~~~~~~~~ 231 (485)
T 2qzs_A 153 PAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEP-QFAYGMEGL 231 (485)
T ss_dssp SSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHHTTSH-HHHTTCHHH
T ss_pred CCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHHHhcc-ccCcchHHH
Confidence 89999999996421 1356777889999999999999988531 0111
Q ss_pred ---CC--CcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCC-CCCcEEEEEecCCCccCHHHH
Q 046057 907 ---HL--HKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRK-SDLPLVGIITRLTHQKGIHLI 980 (1198)
Q Consensus 907 ---~~--~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~-~d~plIg~VGRL~~qKGidlI 980 (1198)
.. .++.+|+||||.+.|.|..+..++.+|+..++ .++...+..+++++|++. .+.++|+++||+.++||++.+
T Consensus 232 ~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~l 310 (485)
T 2qzs_A 232 LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTL-EDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLV 310 (485)
T ss_dssp HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCG-GGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHH
T ss_pred HHhhccCCceEEEecCCCccccCccccccccccccccch-hHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHH
Confidence 12 68999999999999999887778888887765 788888999999999983 367899999999999999999
Q ss_pred HHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHH
Q 046057 981 KHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLV 1060 (1198)
Q Consensus 981 leAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LE 1060 (1198)
++|+..+.+++++|+|+|+|+ ..+.+.+++++.+++ ++|.++.+++.+.+..+|+.||++|+||.+|+||++++|
T Consensus 311 i~a~~~l~~~~~~l~ivG~g~-~~~~~~l~~~~~~~~----~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~lE 385 (485)
T 2qzs_A 311 LEALPGLLEQGGQLALLGAGD-PVLQEGFLAAAAEYP----GQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLY 385 (485)
T ss_dssp HHHHHHHHHTTCEEEEEEEEC-HHHHHHHHHHHHHST----TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHH
T ss_pred HHHHHHHhhCCcEEEEEeCCc-hHHHHHHHHHHHhCC----CcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHHH
Confidence 999999987799999999983 446788889988764 578755666888889999999999999999999999999
Q ss_pred HHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCc
Q 046057 1061 AMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLM 1140 (1198)
Q Consensus 1061 AMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~ 1140 (1198)
||+||+|||++++||++|+|.+++.+.. .....+|++|++.|+++|+++|.
T Consensus 386 Ama~G~PvI~s~~gg~~e~v~~~~~~~~----~~~~~~G~l~~~~d~~~la~~i~------------------------- 436 (485)
T 2qzs_A 386 GLKYGTLPLVRRTGGLADTVSDCSLENL----ADGVASGFVFEDSNAWSLLRAIR------------------------- 436 (485)
T ss_dssp HHHHTCEEEEESSHHHHHHCCBCCHHHH----HTTCCCBEEECSSSHHHHHHHHH-------------------------
T ss_pred HHHCCCCEEECCCCCccceeccCccccc----cccccceEEECCCCHHHHHHHHH-------------------------
Confidence 9999999999999999999987411000 00115899999999999998777
Q ss_pred ccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHh
Q 046057 1141 IPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1141 ~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~a~ 1197 (1198)
+++..+ ++++.+.++++++.++.|||+.++++|+++|++++
T Consensus 437 ---------------~ll~~~-~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 437 ---------------RAFVLW-SRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp ---------------HHHHHH-TSHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_pred ---------------HHHHHc-CCHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhh
Confidence 555422 68888899999998889999999999999999874
No 5
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=1.9e-40 Score=390.08 Aligned_cols=390 Identities=18% Similarity=0.228 Sum_probs=292.8
Q ss_pred CCCcEEEEEccccCCCC---------CCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCcee
Q 046057 707 EPPMHIVHIAVEMAPIA---------KVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEI 777 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~a---------kvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i 777 (1198)
.++|||++|+..++|.. ..||.++++..|+++|+++||+|+|+++....... ... ... .
T Consensus 5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~---~~~--------~~~-~ 72 (499)
T 2r60_A 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENW---PEF--------SGE-I 72 (499)
T ss_dssp --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTB---GGG--------CCS-E
T ss_pred cccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccc---cch--------hhh-H
Confidence 45799999999888842 47999999999999999999999999976332110 000 000 0
Q ss_pred EEeeceecCeEEEEeCCCCC-ccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhc
Q 046057 778 KVWFGKVEGLSVYFLEPQNG-FFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHY 856 (1198)
Q Consensus 778 ~V~~~~~~Gv~v~~l~~~~~-~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~ 856 (1198)
.. .....|+.++.++.... ++....+ ...+..+...+.+++++...+|||||+|.+..++++.+++...
T Consensus 73 ~~-~~~~~gv~v~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~--- 142 (499)
T 2r60_A 73 DY-YQETNKVRIVRIPFGGDKFLPKEEL------WPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIK--- 142 (499)
T ss_dssp EE-CTTCSSEEEEEECCSCSSCCCGGGC------GGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHH---
T ss_pred Hh-ccCCCCeEEEEecCCCcCCcCHHHH------HHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhc---
Confidence 00 00125677776654211 1111111 1112233445666676644589999999877666666666554
Q ss_pred CCCCCeEEEEecCCchhh------------------------hHHHHHHhccCEEEEeCHHHHHHHhCCCCCC-C----C
Q 046057 857 GLSKARIVFTIHNLEFGT------------------------HHIGKAMTYADKATTVSHTYSKEVAGDPAIA-P----H 907 (1198)
Q Consensus 857 gl~~ipvV~tIHn~~~~~------------------------~li~~~~~~AD~VitVS~~~a~el~~~~~l~-~----~ 907 (1198)
++|+|+|+|+..... .+.+..+..+|.++++|+..++.+.....++ . .
T Consensus 143 ---~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~ 219 (499)
T 2r60_A 143 ---GLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVED 219 (499)
T ss_dssp ---CCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTC
T ss_pred ---CCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccC
Confidence 789999999975321 1224567889999999999999886320023 2 4
Q ss_pred CCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhC-----CCCCCCcEEEEEecCCCccCHHHHHH
Q 046057 908 LHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVG-----LRKSDLPLVGIITRLTHQKGIHLIKH 982 (1198)
Q Consensus 908 ~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lG-----L~~~d~plIg~VGRL~~qKGidlIle 982 (1198)
..++.+|+||||.+.|.|.. +...+..+++++| ++ .+.++|+++||+.++||++.+++
T Consensus 220 ~~ki~vi~ngvd~~~~~~~~----------------~~~~~~~~r~~~~~~~~~~~-~~~~~i~~vGrl~~~Kg~~~li~ 282 (499)
T 2r60_A 220 DDKFSVIPPGVNTRVFDGEY----------------GDKIKAKITKYLERDLGSER-MELPAIIASSRLDQKKNHYGLVE 282 (499)
T ss_dssp GGGEEECCCCBCTTTSSSCC----------------CHHHHHHHHHHHHHHSCGGG-TTSCEEEECSCCCGGGCHHHHHH
T ss_pred CCCeEEECCCcChhhcCccc----------------hhhhHHHHHHHhcccccccC-CCCcEEEEeecCccccCHHHHHH
Confidence 57899999999998887621 1234567888888 76 46789999999999999999999
Q ss_pred HHHHhhcC---CcEEEEEecCCCh------------hhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHc----c
Q 046057 983 AIWRTLDR---GGQVVLLGSAPDP------------RIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGA----D 1043 (1198)
Q Consensus 983 Al~~ll~~---~~qLVIvGsgpdp------------~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~A----D 1043 (1198)
|+..+.+. .++|+|+|+.+++ .+.+.++++++++++. ++|.|+|.++.+.+..+|+.| |
T Consensus 283 a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~--~~V~~~G~v~~~~~~~~~~~a~~~~d 360 (499)
T 2r60_A 283 AYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCR--GKVSMFPLNSQQELAGCYAYLASKGS 360 (499)
T ss_dssp HHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCB--TTEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCC--ceEEECCCCCHHHHHHHHHhcCcCCC
Confidence 99998753 3689999983222 1267899999999984 789999999999999999999 9
Q ss_pred EEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhccccccc
Q 046057 1044 FILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFH 1123 (1198)
Q Consensus 1044 i~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~ 1123 (1198)
++|+||.+|+||++++|||+||+|||++++||++|++.++ .+|+++++.|+++|+++|.
T Consensus 361 v~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~-------------~~g~l~~~~d~~~la~~i~-------- 419 (499)
T 2r60_A 361 VFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGG-------------KYGVLVDPEDPEDIARGLL-------- 419 (499)
T ss_dssp EEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGG-------------TSSEEECTTCHHHHHHHHH--------
T ss_pred EEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCC-------------ceEEEeCCCCHHHHHHHHH--------
Confidence 9999999999999999999999999999999999999987 7899999999999996555
Q ss_pred ccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHHHHHHHHHh
Q 046057 1124 TTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV---MEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~yielY~~a~ 1197 (1198)
.+.++++.+.++++++ ..+.|||+.++++|+++|++++
T Consensus 420 ------------------------------------~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~ 460 (499)
T 2r60_A 420 ------------------------------------KAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIA 460 (499)
T ss_dssp ------------------------------------HHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------HHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 4457888888888777 3456999999999999999875
No 6
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=3.8e-40 Score=378.56 Aligned_cols=383 Identities=22% Similarity=0.310 Sum_probs=284.1
Q ss_pred CCCCCCCCcEEEEEccccCCCC-----CCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCce
Q 046057 702 GGVVKEPPMHIVHIAVEMAPIA-----KVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTE 776 (1198)
Q Consensus 702 g~~~~e~pMKIL~Vs~e~~P~a-----kvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~ 776 (1198)
+.+.....|||++|+..+.|.. ..||.+.++..|+++|+++||+|+|+++...... . ..
T Consensus 13 ~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~---------------~~ 76 (438)
T 3c48_A 13 GLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQ-G---------------EI 76 (438)
T ss_dssp ------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGG-C---------------SE
T ss_pred CcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCC-c---------------cc
Confidence 4445567899999999998852 3699999999999999999999999997633100 0 00
Q ss_pred eEEeeceecCeEEEEeCCCCC-ccccccccCCCCchhhHHHHHHHHHHH-HHhcCCCceEEEECCCChhHHHHHHHHhhh
Q 046057 777 IKVWFGKVEGLSVYFLEPQNG-FFSKGCVYGCNNDKERFAFFCHAALEF-LLQGGFHPDIIHCHDWSSAPVAWLFKDHYV 854 (1198)
Q Consensus 777 i~V~~~~~~Gv~v~~l~~~~~-~f~rg~iYg~~dd~~Rf~~F~~aale~-L~~~~~~PDVIH~Hdw~ta~va~llk~~y~ 854 (1198)
.....|+.++.+..... .+.. .+-...+..|...++++ ++.. .+|||||+|.|..++++.+++...
T Consensus 77 ----~~~~~~v~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~- 144 (438)
T 3c48_A 77 ----VRVAENLRVINIAAGPYEGLSK------EELPTQLAAFTGGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLW- 144 (438)
T ss_dssp ----EEEETTEEEEEECCSCSSSCCG------GGGGGGHHHHHHHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHH-
T ss_pred ----ccccCCeEEEEecCCCccccch------hHHHHHHHHHHHHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHc-
Confidence 01235666766653211 0000 00111233344445555 4433 249999999987777766665544
Q ss_pred hcCCCCCeEEEEecCCchhh----------------hHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCC
Q 046057 855 HYGLSKARIVFTIHNLEFGT----------------HHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGI 918 (1198)
Q Consensus 855 ~~gl~~ipvV~tIHn~~~~~----------------~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGI 918 (1198)
++|+|+++|+..... .+.+..+..+|.++++|+..++.+.. .++....++.+|+||+
T Consensus 145 -----~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--~~g~~~~k~~vi~ngv 217 (438)
T 3c48_A 145 -----RIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH--HYDADPDRISVVSPGA 217 (438)
T ss_dssp -----TCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH--HHCCCGGGEEECCCCC
T ss_pred -----CCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHH--HhCCChhheEEecCCc
Confidence 789999999985321 12345668899999999999988853 1234457899999999
Q ss_pred CCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC----CcEE
Q 046057 919 DQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR----GGQV 994 (1198)
Q Consensus 919 D~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~----~~qL 994 (1198)
|.+.|.|... ..+..+++++|++ .+.++|+++||+.++||++.+++|+..+.+. +++|
T Consensus 218 d~~~~~~~~~-----------------~~~~~~r~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l 279 (438)
T 3c48_A 218 DVELYSPGND-----------------RATERSRRELGIP-LHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRV 279 (438)
T ss_dssp CTTTSCCC---------------------CHHHHHHTTCC-SSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEE
T ss_pred cccccCCccc-----------------chhhhhHHhcCCC-CCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEE
Confidence 9988876311 1223478889987 4678999999999999999999999998743 6899
Q ss_pred EEEecCCC-hhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC
Q 046057 995 VLLGSAPD-PRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 995 VIvGsgpd-p~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
+|+|.... ....+.++++++++++. ++|.|+|.++.+.+..+|+.||++|+||.+|+||++++|||+||+|||+++.
T Consensus 280 ~i~G~~~~~g~~~~~l~~~~~~~~l~--~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~ 357 (438)
T 3c48_A 280 IICGGPSGPNATPDTYRHMAEELGVE--KRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARV 357 (438)
T ss_dssp EEECCBC------CHHHHHHHHTTCT--TTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESC
T ss_pred EEEeCCCCCCcHHHHHHHHHHHcCCC--CcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCC
Confidence 99998211 12457889999999884 7899999999888999999999999999999999999999999999999999
Q ss_pred ccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchh
Q 046057 1074 GGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYD 1153 (1198)
Q Consensus 1074 GGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1153 (1198)
||++|++.++ .+|+++++.|+++|+++|.
T Consensus 358 ~~~~e~i~~~-------------~~g~~~~~~d~~~la~~i~-------------------------------------- 386 (438)
T 3c48_A 358 GGLPIAVAEG-------------ETGLLVDGHSPHAWADALA-------------------------------------- 386 (438)
T ss_dssp TTHHHHSCBT-------------TTEEEESSCCHHHHHHHHH--------------------------------------
T ss_pred CChhHHhhCC-------------CcEEECCCCCHHHHHHHHH--------------------------------------
Confidence 9999999887 7999999999999996665
Q ss_pred HHHHHHHHhcCHHHHHHHHHHH---HHhcCChHHHHHHHHHHHHHHh
Q 046057 1154 SFRAISAYYDGREWLNSLCKTV---MEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1154 ~~rAI~~l~~~~e~~~~L~~~a---m~qdfSW~~~A~~yielY~~a~ 1197 (1198)
.+.++++.+.++++++ ..+ |+|+.++++|+++|++++
T Consensus 387 ------~l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~ 426 (438)
T 3c48_A 387 ------TLLDDDETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAI 426 (438)
T ss_dssp ------HHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred ------HHHcCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHh
Confidence 4446788878887777 344 999999999999999875
No 7
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=100.00 E-value=1.3e-39 Score=393.88 Aligned_cols=418 Identities=17% Similarity=0.146 Sum_probs=300.9
Q ss_pred EEEEccccCCCCCCCcHHHHHHHHHHHHHh-CCCeEEEEeeCCCCCccccccccc-ccc---------------cccCCC
Q 046057 712 IVHIAVEMAPIAKVGGLGDVVTSLSRTVQD-LNHNVDIILPKYDCLKFSDVKDLG-YNR---------------SYHWGG 774 (1198)
Q Consensus 712 IL~Vs~e~~P~akvGGl~~vV~~LarAL~~-~GH~V~VItP~y~~~~~~~~~~l~-~~~---------------~~~~g~ 774 (1198)
|-=+++|.+. |+||+-+|+..=|..+++ .|-+..+|.|....-...++..+. ... ...-.|
T Consensus 30 lfE~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~G 107 (725)
T 3nb0_A 30 LFETATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQTMESRG 107 (725)
T ss_dssp EEEEETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHHHHTTT
T ss_pred EEeeehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecCCCCchhhcchhHHHHHHHHHHHHCC
Confidence 4447788877 899999999988887765 588999999852211111000000 000 112246
Q ss_pred ceeEEeeceecCeEEEEeCCCCCcccc----------------ccccCCCCchhhHHHHHHHHHHHHHhcC-CCceEEEE
Q 046057 775 TEIKVWFGKVEGLSVYFLEPQNGFFSK----------------GCVYGCNNDKERFAFFCHAALEFLLQGG-FHPDIIHC 837 (1198)
Q Consensus 775 ~~i~V~~~~~~Gv~v~~l~~~~~~f~r----------------g~iYg~~dd~~Rf~~F~~aale~L~~~~-~~PDVIH~ 837 (1198)
..+++.+..++|.+.++|-....+++. ...|+..++.++|++|+.++++.+.... ++|||+||
T Consensus 108 ~~v~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~i~s~~~yg~~dd~~~F~y~~~avl~~l~~~~~~~pdIiH~ 187 (725)
T 3nb0_A 108 VHFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHLDSQHAIVAHF 187 (725)
T ss_dssp CCEEEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEE
T ss_pred CeEEEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHHhcCCCCCcEEEe
Confidence 667888888999988877654444432 1124456889999999999999998765 67999999
Q ss_pred CCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh--------------------------------hhHHHHHHhccC
Q 046057 838 HDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG--------------------------------THHIGKAMTYAD 885 (1198)
Q Consensus 838 Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~--------------------------------~~li~~~~~~AD 885 (1198)
|||++++++.+++..+ .++++|||||+..++ .++++.++.+||
T Consensus 188 HDW~tg~~~~~Lk~~~-----~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~AD 262 (725)
T 3nb0_A 188 HEWLAGVALPLCRKRR-----IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSAD 262 (725)
T ss_dssp ESGGGCTHHHHHHHTT-----CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred CchhhhHHHHHHHHhC-----CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHhCC
Confidence 9999999999998764 389999999998421 124566788999
Q ss_pred EEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHh--------CC
Q 046057 886 KATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKV--------GL 957 (1198)
Q Consensus 886 ~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~l--------GL 957 (1198)
.|+|||+.+++|+.. .+..... +. |+||||.+.|+|. ......+..+|+++++.+ ++
T Consensus 263 ~ITTVS~~yA~Ei~~--Ll~r~~d-~i-IpNGID~~~f~p~-----------~~~~~~k~~aK~klq~~l~~~~~~~l~l 327 (725)
T 3nb0_A 263 VFTTVSQITAFEAEH--LLKRKPD-GI-LPNGLNVIKFQAF-----------HEFQNLHALKKEKINDFVRGHFHGCFDF 327 (725)
T ss_dssp EEEESSHHHHHHHHH--HTSSCCS-EE-CCCCBCCCCCSST-----------THHHHHHHHHHHHHHHHHHHHTTTCCCS
T ss_pred EEEECCHHHHHHHHH--HhcCCCC-EE-EcCCccccccCcc-----------hhhHHHHHHHHHHHHHHHHhhcccCCCC
Confidence 999999999999974 3344334 33 9999999999983 122356667888887654 34
Q ss_pred CCCCCcEEEEEecCC-CccCHHHHHHHHHHhhcC------C---cEEEEEecCCCh-h----------------------
Q 046057 958 RKSDLPLVGIITRLT-HQKGIHLIKHAIWRTLDR------G---GQVVLLGSAPDP-R---------------------- 1004 (1198)
Q Consensus 958 ~~~d~plIg~VGRL~-~qKGidlIleAl~~ll~~------~---~qLVIvGsgpdp-~---------------------- 1004 (1198)
+.++.++|+++||++ .+||++++++|+.++... + +.|+|+..+... .
T Consensus 328 ~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~ 407 (725)
T 3nb0_A 328 DLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTT 407 (725)
T ss_dssp CGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHH
Confidence 323567777889999 799999999999888631 1 567776654111 0
Q ss_pred ---------------------------------------------------------------hHHHHHHHHHHhCCCCC
Q 046057 1005 ---------------------------------------------------------------IQNDFVNLANELHSSHA 1021 (1198)
Q Consensus 1005 ---------------------------------------------------------------i~~~L~~la~eLgl~~~ 1021 (1198)
..+.+.+.++++++.+.
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~ 487 (725)
T 3nb0_A 408 SIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNS 487 (725)
T ss_dssp HHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCC
T ss_pred HHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCC
Confidence 00112223345555321
Q ss_pred --C--cEEEEccC-ChH------HHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhh
Q 046057 1022 --D--RARLCLTY-DEP------LSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERA 1090 (1198)
Q Consensus 1022 --d--rV~f~g~~-d~~------~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~ 1090 (1198)
+ +|.|++.+ +.. .+..+|++||++|+||++||||+++||||+||+|||+|++||+.|+|.++....
T Consensus 488 ~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~--- 564 (725)
T 3nb0_A 488 PSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETN--- 564 (725)
T ss_dssp TTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHH---
T ss_pred cCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhcccccc---
Confidence 2 35666665 222 478999999999999999999999999999999999999999999998862100
Q ss_pred hccCCCCcEEEEc---CCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhc-CHH
Q 046057 1091 QALDLEPNGFSFD---GADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYD-GRE 1166 (1198)
Q Consensus 1091 ~~~~~~~nG~lf~---~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~-~~e 1166 (1198)
+...+|++|. +.++++++++|. ++|..+.+ ++.
T Consensus 565 ---~~~~tG~lV~~rd~~d~ee~aeaLa----------------------------------------~aL~~f~~~d~~ 601 (725)
T 3nb0_A 565 ---QAKDYGIYIVDRRFKAPDESVEQLV----------------------------------------DYMEEFVKKTRR 601 (725)
T ss_dssp ---HHHHTTEEEECCSSSCHHHHHHHHH----------------------------------------HHHHHHHTCCHH
T ss_pred ---CCCCceEEEeCCCCCCHHHHHHHHH----------------------------------------HHHHHHHhCCHH
Confidence 0014799994 557888888888 78776654 666
Q ss_pred HHHHHHHHH--HHhcCChHHHHHHHHHHHHHHh
Q 046057 1167 WLNSLCKTV--MEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1167 ~~~~L~~~a--m~qdfSW~~~A~~yielY~~a~ 1197 (1198)
.+..+++++ +.++|||++++.+|+++|+.++
T Consensus 602 ~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL 634 (725)
T 3nb0_A 602 QRINQRNATEALSDLLDWKRMGLEYVKARQLAL 634 (725)
T ss_dssp HHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 667777777 5678999999999999999875
No 8
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=1.1e-38 Score=398.64 Aligned_cols=405 Identities=15% Similarity=0.120 Sum_probs=293.4
Q ss_pred CCcEEEEEccccC---------CCCCCCcHHHHHHH--------HHHHHHhCCCeEE----EEeeCCCCCcccccccccc
Q 046057 708 PPMHIVHIAVEMA---------PIAKVGGLGDVVTS--------LSRTVQDLNHNVD----IILPKYDCLKFSDVKDLGY 766 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~---------P~akvGGl~~vV~~--------LarAL~~~GH~V~----VItP~y~~~~~~~~~~l~~ 766 (1198)
..|+|++|+...+ | .+||...||.+ |+++|+++||+|+ |+|....+... .+..
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~--dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~g---~~y~- 350 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYP--DTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVG---TTCG- 350 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTST--TCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCTT---SSTT-
T ss_pred ceeEEEEEcCCcccCccccCCCC--CCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCCC---CccC-
Confidence 3589999998876 5 58999999995 5556677999886 88876443110 0000
Q ss_pred cccccCCCceeEEeeceecCeEEEEeCCCC------CccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCC
Q 046057 767 NRSYHWGGTEIKVWFGKVEGLSVYFLEPQN------GFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDW 840 (1198)
Q Consensus 767 ~~~~~~g~~~i~V~~~~~~Gv~v~~l~~~~------~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw 840 (1198)
..... ....+|+.++.++... .++.+..++.+ -..|+..++..++...+.+|||||+|.|
T Consensus 351 --------~~~e~-i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~-----L~~F~~~~l~~il~~~~~~PDVIHsH~~ 416 (816)
T 3s28_A 351 --------ERLER-VYDSEYCDILRVPFRTEKGIVRKWISRFEVWPY-----LETYTEDAAVELSKELNGKPDLIIGNYS 416 (816)
T ss_dssp --------SSEEE-CTTCSSEEEEEECEEETTEEECSCCCTTTCGGG-----HHHHHHHHHHHHHHHCSSCCSEEEEEHH
T ss_pred --------Cccee-ecCcCCeEEEEecCCCccccccccccHHHHHHH-----HHHHHHHHHHHHHHhcCCCCeEEEeCCc
Confidence 00000 0112466666665321 12222222221 1123335556666666678999999999
Q ss_pred ChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhh---------------H------HHHHHhccCEEEEeCHHHHHHHh
Q 046057 841 SSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTH---------------H------IGKAMTYADKATTVSHTYSKEVA 899 (1198)
Q Consensus 841 ~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~---------------l------i~~~~~~AD~VitVS~~~a~el~ 899 (1198)
.+++++++++..+ ++|+|+|+|++..... + ....+..||.|+++|+..++.+.
T Consensus 417 ~sglva~llar~~------gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~ 490 (816)
T 3s28_A 417 DGNLVASLLAHKL------GVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSK 490 (816)
T ss_dssp HHHHHHHHHHHHH------TCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCS
T ss_pred hHHHHHHHHHHHc------CCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHH
Confidence 9999998888776 8999999999864310 0 12367899999999999988643
Q ss_pred CC-CCCC------------------CCCCcEEEEeCCCCCCCCCCCCCCC--CCcccccchhhhchHHHHHHHHHHhCCC
Q 046057 900 GD-PAIA------------------PHLHKFYGILNGIDQDMWDPFNDKF--IPVSYTSENLVEGKRAAKEALQQKVGLR 958 (1198)
Q Consensus 900 ~~-~~l~------------------~~~~K~~vI~NGID~d~~~P~~D~~--Lp~~ys~~~~~~gk~~~k~aLrq~lGL~ 958 (1198)
.. ..+. ....|+.+||||||.+.|.|..+.. +...+. .+......+...++.+|+.
T Consensus 491 ~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~---~i~~~l~~p~~~r~~lg~l 567 (816)
T 3s28_A 491 ETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHS---EIEELLYSDVENKEHLCVL 567 (816)
T ss_dssp SSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHH---HHHHHHHCSCCBTTEESCB
T ss_pred HHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccc---cccccccchhhHHHHhccc
Confidence 21 1111 1123999999999999998854321 111000 0000000111234566762
Q ss_pred -CCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCC--------hhhHHHHHHHHHHhCCCCCCcEEEE
Q 046057 959 -KSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPD--------PRIQNDFVNLANELHSSHADRARLC 1027 (1198)
Q Consensus 959 -~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpd--------p~i~~~L~~la~eLgl~~~drV~f~ 1027 (1198)
.++.++|+++||+.+.||++.+++|+..+.+ ++++|+|+|++++ ......+.++++++++. ++|.|+
T Consensus 568 ~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~--~~V~fl 645 (816)
T 3s28_A 568 KDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLN--GQFRWI 645 (816)
T ss_dssp SCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCB--BBEEEE
T ss_pred CCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCC--CcEEEc
Confidence 2578999999999999999999999999875 4799999999862 12567889999999984 899999
Q ss_pred ccC----ChHHHHHHHH-HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEE
Q 046057 1028 LTY----DEPLSHLIYA-GADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSF 1102 (1198)
Q Consensus 1028 g~~----d~~~l~~iyA-~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf 1102 (1198)
|.. +.+++..+|+ +||++|+||.+|+||++++|||+||+|||++++||++|+|.++ .+|++|
T Consensus 646 G~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg-------------~~Gllv 712 (816)
T 3s28_A 646 SSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHG-------------KSGFHI 712 (816)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBT-------------TTBEEE
T ss_pred cCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHccC-------------CcEEEe
Confidence 954 3466777777 6899999999999999999999999999999999999999987 899999
Q ss_pred cCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHH---Hhc
Q 046057 1103 DGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVM---EQD 1179 (1198)
Q Consensus 1103 ~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am---~qd 1179 (1198)
++.|+++++++|. +++..+..+++.+.++++++. .+.
T Consensus 713 ~p~D~e~LA~aI~----------------------------------------~lL~~Ll~d~~~~~~m~~~ar~~a~~~ 752 (816)
T 3s28_A 713 DPYHGDQAADTLA----------------------------------------DFFTKCKEDPSHWDEISKGGLQRIEEK 752 (816)
T ss_dssp CTTSHHHHHHHHH----------------------------------------HHHHHHHHCTHHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHH----------------------------------------HHHHHhccCHHHHHHHHHHHHHHHHHh
Confidence 9999999999998 777777789999999998883 378
Q ss_pred CChHHHHHHHHHHHHHH
Q 046057 1180 WSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1180 fSW~~~A~~yielY~~a 1196 (1198)
|||+.++++|+++|+..
T Consensus 753 fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 753 YTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 99999999999999864
No 9
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=3e-37 Score=347.34 Aligned_cols=357 Identities=17% Similarity=0.225 Sum_probs=277.2
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCe
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGL 787 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv 787 (1198)
++|||++|+..+.|. .||.++++..|+++| +||+|+|+++......... + ....++
T Consensus 3 ~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~---~-----------------~~~~~~ 58 (394)
T 3okp_A 3 ASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHA---Y-----------------DKTLDY 58 (394)
T ss_dssp -CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHH---H-----------------HTTCSS
T ss_pred CCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhh---h-----------------ccccce
Confidence 479999999998884 899999999999999 6999999998643210000 0 012344
Q ss_pred EEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChh-HHHHHHHHhhhhcCCCCC-eEEE
Q 046057 788 SVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSA-PVAWLFKDHYVHYGLSKA-RIVF 865 (1198)
Q Consensus 788 ~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta-~va~llk~~y~~~gl~~i-pvV~ 865 (1198)
.++.+.... .+ ....+...+.+++++ .+|||||+|..... +++.+++. + ++ ++|+
T Consensus 59 ~~~~~~~~~-~~-------------~~~~~~~~l~~~~~~--~~~Dvv~~~~~~~~~~~~~~~~~-~------~~~~~i~ 115 (394)
T 3okp_A 59 EVIRWPRSV-ML-------------PTPTTAHAMAEIIRE--REIDNVWFGAAAPLALMAGTAKQ-A------GASKVIA 115 (394)
T ss_dssp EEEEESSSS-CC-------------SCHHHHHHHHHHHHH--TTCSEEEESSCTTGGGGHHHHHH-T------TCSEEEE
T ss_pred EEEEccccc-cc-------------cchhhHHHHHHHHHh--cCCCEEEECCcchHHHHHHHHHh-c------CCCcEEE
Confidence 555554321 11 011234456666666 48999999976543 33333332 2 45 5999
Q ss_pred EecCCchh-------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccc
Q 046057 866 TIHNLEFG-------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSE 938 (1198)
Q Consensus 866 tIHn~~~~-------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~ 938 (1198)
++|+.... ..+++..+..+|.++++|+...+.+.... . ...++.+|+||+|.+.|.|.
T Consensus 116 ~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--~-~~~~~~vi~ngv~~~~~~~~------------ 180 (394)
T 3okp_A 116 STHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAF--G-SHPTFEHLPSGVDVKRFTPA------------ 180 (394)
T ss_dssp ECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHHHH--C-SSSEEEECCCCBCTTTSCCC------------
T ss_pred EeccchhhhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHHhc--C-CCCCeEEecCCcCHHHcCCC------------
Confidence 99987643 34566778899999999999998886421 1 24689999999999888762
Q ss_pred hhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHh
Q 046057 939 NLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANEL 1016 (1198)
Q Consensus 939 ~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eL 1016 (1198)
....+..+++++|++ ++.++|+++||+.+.||++.+++|+..+.+ ++++|+|+|+++. ...+++++ .
T Consensus 181 -----~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~---~~~l~~~~--~ 249 (394)
T 3okp_A 181 -----TPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRY---ESTLRRLA--T 249 (394)
T ss_dssp -----CHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTT---HHHHHHHT--G
T ss_pred -----CchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchH---HHHHHHHH--h
Confidence 123467889999998 466899999999999999999999999875 4799999999853 56777777 3
Q ss_pred CCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCC-------CCCcHHHHHHHHhCCcEEEeCCccccccccccccchhh
Q 046057 1017 HSSHADRARLCLTYDEPLSHLIYAGADFILVPSIF-------EPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKER 1089 (1198)
Q Consensus 1017 gl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~-------EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~ 1089 (1198)
++ .++|.|+|.++.+.+..+|+.||++|+||.+ |+||++++|||++|+|+|++++||..|++.+
T Consensus 250 ~~--~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~------- 320 (394)
T 3okp_A 250 DV--SQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP------- 320 (394)
T ss_dssp GG--GGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCT-------
T ss_pred cc--cCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhc-------
Confidence 44 3789999999999999999999999999999 9999999999999999999999999999976
Q ss_pred hhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHH
Q 046057 1090 AQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLN 1169 (1198)
Q Consensus 1090 ~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~ 1169 (1198)
.+|+++++.|+++|+++|. .+.++++.+.
T Consensus 321 -------~~g~~~~~~d~~~l~~~i~--------------------------------------------~l~~~~~~~~ 349 (394)
T 3okp_A 321 -------ATGLVVEGSDVDKLSELLI--------------------------------------------ELLDDPIRRA 349 (394)
T ss_dssp -------TTEEECCTTCHHHHHHHHH--------------------------------------------HHHTCHHHHH
T ss_pred -------CCceEeCCCCHHHHHHHHH--------------------------------------------HHHhCHHHHH
Confidence 3799999999999995555 4457888888
Q ss_pred HHHHHH---HHhcCChHHHHHHHHHHHHHHh
Q 046057 1170 SLCKTV---MEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1170 ~L~~~a---m~qdfSW~~~A~~yielY~~a~ 1197 (1198)
++++++ ..+.|||+.++++|+++|++++
T Consensus 350 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 350 AMGAAGRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHHHHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 888877 4457999999999999998764
No 10
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=2.3e-36 Score=343.45 Aligned_cols=359 Identities=19% Similarity=0.243 Sum_probs=263.3
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
|+.-++...+ | ..||.+.++..|+++|+++||+|+|+++...... . ...+++.+
T Consensus 14 ~~~~~~~~~~-p--~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~----------------------~~~~~i~~ 67 (394)
T 2jjm_A 14 MKLKIGITCY-P--SVGGSGVVGTELGKQLAERGHEIHFITSGLPFRL-N----------------------KVYPNIYF 67 (394)
T ss_dssp -CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC---------------------------CCCTTEEE
T ss_pred heeeeehhcC-C--CCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc-c----------------------ccCCceEE
Confidence 4433344444 5 3799999999999999999999999997532100 0 01122322
Q ss_pred EEeCCCC-CccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhH-HHHHHHHhhhhcCCCCCeEEEEe
Q 046057 790 YFLEPQN-GFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAP-VAWLFKDHYVHYGLSKARIVFTI 867 (1198)
Q Consensus 790 ~~l~~~~-~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~-va~llk~~y~~~gl~~ipvV~tI 867 (1198)
..+.... ..+.. . ... ..+...+.+++++ .+|||||+|.+.... .+.+.+... + .++|+|+++
T Consensus 68 ~~~~~~~~~~~~~------~--~~~-~~~~~~l~~~l~~--~~~Dvv~~~~~~~~~~~~~~~~~~~---~-~~~p~v~~~ 132 (394)
T 2jjm_A 68 HEVTVNQYSVFQY------P--PYD-LALASKMAEVAQR--ENLDILHVHYAIPHAICAYLAKQMI---G-ERIKIVTTL 132 (394)
T ss_dssp ECCCCC----CCS------C--CHH-HHHHHHHHHHHHH--HTCSEEEECSSTTHHHHHHHHHHHT---T-TCSEEEEEC
T ss_pred Eeccccccccccc------c--ccc-HHHHHHHHHHHHH--cCCCEEEEcchhHHHHHHHHHHHhh---c-CCCCEEEEE
Confidence 2222110 00100 0 001 1223445556655 489999999765443 333333322 1 258999999
Q ss_pred cCCch--------hhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccch
Q 046057 868 HNLEF--------GTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSEN 939 (1198)
Q Consensus 868 Hn~~~--------~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~ 939 (1198)
|+... ...+.+..+..+|.++++|+...+.+... +.. ..++.+|+||+|.+.|.|..
T Consensus 133 h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~--~~~-~~~~~vi~ngv~~~~~~~~~------------ 197 (394)
T 2jjm_A 133 HGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHEL--VKP-NKDIQTVYNFIDERVYFKRD------------ 197 (394)
T ss_dssp CHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHHH--TCC-SSCEEECCCCCCTTTCCCCC------------
T ss_pred ecCcccccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHHh--hCC-cccEEEecCCccHHhcCCcc------------
Confidence 98543 13456677889999999999999888642 122 46899999999998877621
Q ss_pred hhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC-CcEEEEEecCCChhhHHHHHHHHHHhCC
Q 046057 940 LVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR-GGQVVLLGSAPDPRIQNDFVNLANELHS 1018 (1198)
Q Consensus 940 ~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~-~~qLVIvGsgpdp~i~~~L~~la~eLgl 1018 (1198)
+..++++++++ .+.++|+++||+.++||++.+++|+..+.+. +++|+|+|+++. .+.++++++++++
T Consensus 198 --------~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~---~~~l~~~~~~~~l 265 (394)
T 2jjm_A 198 --------MTQLKKEYGIS-ESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPE---FCTILQLVKNLHI 265 (394)
T ss_dssp --------CHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCTT---HHHHHHHHHTTTC
T ss_pred --------hHHHHHHcCCC-CCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCchH---HHHHHHHHHHcCC
Confidence 23567788886 3678999999999999999999999998754 799999998863 5788999998887
Q ss_pred CCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCc
Q 046057 1019 SHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPN 1098 (1198)
Q Consensus 1019 ~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~n 1098 (1198)
.++|.|+|.. +.+..+|+.||++|+||.+|+||++++|||+||+|+|++++||++|++.++ .+
T Consensus 266 --~~~v~~~g~~--~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~-------------~~ 328 (394)
T 2jjm_A 266 --EDRVLFLGKQ--DNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHG-------------DT 328 (394)
T ss_dssp --GGGBCCCBSC--SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBT-------------TT
T ss_pred --CCeEEEeCch--hhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcC-------------Cc
Confidence 4789998863 446899999999999999999999999999999999999999999999887 78
Q ss_pred EEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH---
Q 046057 1099 GFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--- 1175 (1198)
Q Consensus 1099 G~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--- 1175 (1198)
|+++++.|+++|+++|. .+.++++.+.++++++
T Consensus 329 g~~~~~~d~~~la~~i~--------------------------------------------~l~~~~~~~~~~~~~~~~~ 364 (394)
T 2jjm_A 329 GYLCEVGDTTGVADQAI--------------------------------------------QLLKDEELHRNMGERARES 364 (394)
T ss_dssp EEEECTTCHHHHHHHHH--------------------------------------------HHHHCHHHHHHHHHHHHHH
T ss_pred eEEeCCCCHHHHHHHHH--------------------------------------------HHHcCHHHHHHHHHHHHHH
Confidence 99999999999996665 3446788888888777
Q ss_pred HHhcCChHHHHHHHHHHHHHHh
Q 046057 1176 MEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1176 m~qdfSW~~~A~~yielY~~a~ 1197 (1198)
..+.|||+.++++|+++|++++
T Consensus 365 ~~~~~s~~~~~~~~~~~~~~~~ 386 (394)
T 2jjm_A 365 VYEQFRSEKIVSQYETIYYDVL 386 (394)
T ss_dssp HHHHSCHHHHHHHHHHHHHHTC
T ss_pred HHHhCCHHHHHHHHHHHHHHHH
Confidence 3378999999999999999875
No 11
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=2e-36 Score=346.53 Aligned_cols=362 Identities=15% Similarity=0.163 Sum_probs=259.5
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCe
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGL 787 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv 787 (1198)
++|||+||+..+ ..||.++++..|+++|++.||+|+|++..... ....... .+ .....+.
T Consensus 39 ~~mkIl~v~~~~----~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~----~~~~~~~--~~----------~~~~~~~ 98 (416)
T 2x6q_A 39 KGRSFVHVNSTS----FGGGVAEILHSLVPLLRSIGIEARWFVIEGPT----EFFNVTK--TF----------HNALQGN 98 (416)
T ss_dssp TTCEEEEEESCS----SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH----HHHHHHH--HH----------HHHHTTC
T ss_pred hccEEEEEeCCC----CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc----chhhhhc--cc----------ceeeccc
Confidence 469999998753 47999999999999999999999999864221 0000000 00 0000111
Q ss_pred EEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEe
Q 046057 788 SVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTI 867 (1198)
Q Consensus 788 ~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tI 867 (1198)
..+.+. . .....+..+...+.++++. .+|||||+|++....+..+++ ..+|+|+++
T Consensus 99 ~~~~~~-------~-------~~~~~~~~~~~~~~~~l~~--~~~Dvv~~~~~~~~~~~~~~~--------~~~p~v~~~ 154 (416)
T 2x6q_A 99 ESLKLT-------E-------EMKELYLNVNRENSKFIDL--SSFDYVLVHDPQPAALIEFYE--------KKSPWLWRC 154 (416)
T ss_dssp CSCCCC-------H-------HHHHHHHHHHHHHHHSSCG--GGSSEEEEESSTTGGGGGGSC--------CCSCEEEEC
T ss_pred cccccc-------H-------HHHHHHHHHHHHHHHHHhh--cCCCEEEEeccchhhHHHHHH--------hcCCEEEEE
Confidence 000000 0 0000111112222222222 389999999876544332211 148999999
Q ss_pred cCCchh-----hhHHHHHHhccCEEE-EeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhh
Q 046057 868 HNLEFG-----THHIGKAMTYADKAT-TVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLV 941 (1198)
Q Consensus 868 Hn~~~~-----~~li~~~~~~AD~Vi-tVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~ 941 (1198)
|+.... ..++...+..+|.++ ++|+...+.+ ...++.+|+||||...+.+..
T Consensus 155 h~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~--------~~~~~~vi~ngvd~~~~~~~~-------------- 212 (416)
T 2x6q_A 155 HIDLSSPNREFWEFLRRFVEKYDRYIFHLPEYVQPEL--------DRNKAVIMPPSIDPLSEKNVE-------------- 212 (416)
T ss_dssp CSCCSSCCHHHHHHHHHHHTTSSEEEESSGGGSCTTS--------CTTTEEECCCCBCTTSTTTSC--------------
T ss_pred ccccCCccHHHHHHHHHHHHhCCEEEEechHHHHhhC--------CccceEEeCCCCChhhhcccc--------------
Confidence 986532 345556677788776 4554433222 236899999999987654311
Q ss_pred hchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCC--hhhHHHHHHHHHHhC
Q 046057 942 EGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPD--PRIQNDFVNLANELH 1017 (1198)
Q Consensus 942 ~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpd--p~i~~~L~~la~eLg 1017 (1198)
.....+..+++++|++ ++.++|+++||+.++||++.+++|+..+.+ ++++|+|+|+++. +.....+++++++++
T Consensus 213 -~~~~~~~~~r~~~~~~-~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~ 290 (416)
T 2x6q_A 213 -LKQTEILRILERFDVD-PEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIG 290 (416)
T ss_dssp -CCHHHHHHHHHHTTCC-TTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred -cChhhHHHHHHHhCCC-CCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhC
Confidence 1123456788999997 477899999999999999999999999875 4899999999864 445677899999998
Q ss_pred CCCCCcEEEEccC---ChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccC
Q 046057 1018 SSHADRARLCLTY---DEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALD 1094 (1198)
Q Consensus 1018 l~~~drV~f~g~~---d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~ 1094 (1198)
+. ++|.|+|.+ +.+.+..+|+.||++|+||.+|+||++++|||+||+|+|+++.||++|++.++
T Consensus 291 ~~--~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~----------- 357 (416)
T 2x6q_A 291 ED--YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDG----------- 357 (416)
T ss_dssp TC--TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBT-----------
T ss_pred CC--CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecC-----------
Confidence 84 789999854 46788999999999999999999999999999999999999999999999987
Q ss_pred CCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHH
Q 046057 1095 LEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKT 1174 (1198)
Q Consensus 1095 ~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~ 1174 (1198)
.+|++++ |+++|+++|. .+.++++.+.+++++
T Consensus 358 --~~g~l~~--d~~~la~~i~--------------------------------------------~ll~~~~~~~~~~~~ 389 (416)
T 2x6q_A 358 --ETGFLVR--DANEAVEVVL--------------------------------------------YLLKHPEVSKEMGAK 389 (416)
T ss_dssp --TTEEEES--SHHHHHHHHH--------------------------------------------HHHHCHHHHHHHHHH
T ss_pred --CCeEEEC--CHHHHHHHHH--------------------------------------------HHHhCHHHHHHHHHH
Confidence 7999997 8999985555 444688888888887
Q ss_pred H---HHhcCChHHHHHHHHHHHHHHhC
Q 046057 1175 V---MEQDWSWNRPALDYMELYRAARK 1198 (1198)
Q Consensus 1175 a---m~qdfSW~~~A~~yielY~~a~K 1198 (1198)
+ +.+.|||+.++++|+++|+++++
T Consensus 390 a~~~~~~~fs~~~~~~~~~~~~~~l~~ 416 (416)
T 2x6q_A 390 AKERVRKNFIITKHMERYLDILNSLGG 416 (416)
T ss_dssp HHHHHHHHTBHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHhhC
Confidence 7 34589999999999999998764
No 12
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=3.4e-37 Score=345.02 Aligned_cols=356 Identities=13% Similarity=0.114 Sum_probs=264.4
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
|||++|+..+.| .||.++++..|+++|+++||+|+|+++..... ..+|+.+
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------------------------~~~~~~v 51 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGD--------------------------CPKAFEL 51 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSC--------------------------CCTTCEE
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCC--------------------------CCCCcEE
Confidence 899999998877 59999999999999999999999999652210 0135555
Q ss_pred EEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecC
Q 046057 790 YFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHN 869 (1198)
Q Consensus 790 ~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn 869 (1198)
+.++... . ....++..+...+..+++. .+|||||+|++..++...+.. ....++.+.+.|+
T Consensus 52 ~~~~~~~-~----------~~~~~~~~~~~~l~~~i~~--~~~Dvv~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 112 (374)
T 2iw1_A 52 IQVPVKS-H----------TNHGRNAEYYAWVQNHLKE--HPADRVVGFNKMPGLDVYFAA------DVCYAEKVAQEKG 112 (374)
T ss_dssp EECCCCC-S----------SHHHHHHHHHHHHHHHHHH--SCCSEEEESSCCTTCSEEECC------SCCHHHHHHHHCC
T ss_pred EEEccCc-c----------cchhhHHHHHHHHHHHHhc--cCCCEEEEecCCCCceeeecc------ccccceeeeeccc
Confidence 5554321 1 0112333444556666665 489999999865432111100 0112333444454
Q ss_pred Cchh--------hhHHHHHHh--ccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccch
Q 046057 870 LEFG--------THHIGKAMT--YADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSEN 939 (1198)
Q Consensus 870 ~~~~--------~~li~~~~~--~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~ 939 (1198)
.... ..+.+..+. .+|.++++|+..++.+.. .++....++.+|+||+|.+.|.|..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--~~~~~~~~~~vi~ngv~~~~~~~~~------------ 178 (374)
T 2iw1_A 113 FLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQK--HYQTEPERFQILPPGIYPDRKYSEQ------------ 178 (374)
T ss_dssp HHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHH--HHCCCGGGEEECCCCCCGGGSGGGS------------
T ss_pred chhhhcHHHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHH--HhCCChhheEEecCCcCHHhcCccc------------
Confidence 3221 011122232 699999999999988863 2234457899999999998876521
Q ss_pred hhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC---CcEEEEEecCCChhhHHHHHHHHHHh
Q 046057 940 LVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR---GGQVVLLGSAPDPRIQNDFVNLANEL 1016 (1198)
Q Consensus 940 ~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~---~~qLVIvGsgpdp~i~~~L~~la~eL 1016 (1198)
....+..+++++|++ .+.++|+++||+.+.||++.+++|+..+.+. +++|+|+|+++. +.++++++++
T Consensus 179 ----~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~----~~~~~~~~~~ 249 (374)
T 2iw1_A 179 ----IPNSREIYRQKNGIK-EQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP----RKFEALAEKL 249 (374)
T ss_dssp ----CTTHHHHHHHHTTCC-TTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC----HHHHHHHHHH
T ss_pred ----chhHHHHHHHHhCCC-CCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH----HHHHHHHHHc
Confidence 123456788999997 4678999999999999999999999988653 799999999852 6788899998
Q ss_pred CCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCC
Q 046057 1017 HSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLE 1096 (1198)
Q Consensus 1017 gl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~ 1096 (1198)
++ .++|.|+|..+ .+..+|+.||++|+||.+|+||++++|||++|+|+|+++.||..|++.++
T Consensus 250 ~~--~~~v~~~g~~~--~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~------------- 312 (374)
T 2iw1_A 250 GV--RSNVHFFSGRN--DVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADA------------- 312 (374)
T ss_dssp TC--GGGEEEESCCS--CHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHH-------------
T ss_pred CC--CCcEEECCCcc--cHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccC-------------
Confidence 87 37899999743 47899999999999999999999999999999999999999999999987
Q ss_pred CcEEEEc-CCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH
Q 046057 1097 PNGFSFD-GADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV 1175 (1198)
Q Consensus 1097 ~nG~lf~-~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a 1175 (1198)
.+|++++ +.|+++|+++|. .+.++++.+.++++++
T Consensus 313 ~~g~~~~~~~~~~~l~~~i~--------------------------------------------~l~~~~~~~~~~~~~~ 348 (374)
T 2iw1_A 313 NCGTVIAEPFSQEQLNEVLR--------------------------------------------KALTQSPLRMAWAENA 348 (374)
T ss_dssp TCEEEECSSCCHHHHHHHHH--------------------------------------------HHHHCHHHHHHHHHHH
T ss_pred CceEEeCCCCCHHHHHHHHH--------------------------------------------HHHcChHHHHHHHHHH
Confidence 8999998 899999996665 3446788888888887
Q ss_pred --HHhcCChHHHHHHHHHHHHHHh
Q 046057 1176 --MEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1176 --m~qdfSW~~~A~~yielY~~a~ 1197 (1198)
..+.++|...++++.++++..+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 349 RHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHHHHhhHHHHHHHHHHHHHHhh
Confidence 3357899999999999987643
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=9.3e-35 Score=331.84 Aligned_cols=369 Identities=14% Similarity=0.127 Sum_probs=266.0
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
|||++|+..+ | ..||.++++..|+++|+++ |+|+|++....... . .. ....+......
T Consensus 1 MkI~~v~~~~-p--~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~--~-----------~~--~~~~~~~~~~~--- 58 (413)
T 3oy2_A 1 MKLIIVGAHS-S--VPSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRS--V-----------HA--NIEEFDAQTAE--- 58 (413)
T ss_dssp CEEEEEEECT-T--CCSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCC--S-----------CS--SSEEEEHHHHH---
T ss_pred CeEEEecCCC-C--CCCCHHHHHHHHHHHHHhc-CCeEEEeecCCCcc--c-----------cc--ccccCCccccc---
Confidence 9999998755 4 3699999999999999999 99999986522000 0 00 00000000000
Q ss_pred EEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecC
Q 046057 790 YFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHN 869 (1198)
Q Consensus 790 ~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn 869 (1198)
.+...+. +.++...+.+.++. .+|||||+|.|...+.+.+..... .....+++.++|+
T Consensus 59 -~~~~~~~----------------~~~~~~~l~~~l~~--~~~Div~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 116 (413)
T 3oy2_A 59 -HVRGLNE----------------QGFYYSGLSEFIDV--HKPDIVMIYNDPIVIGNYLLAMGK---CSHRTKIVLYVDL 116 (413)
T ss_dssp -HHTTCCS----------------TTCCHHHHHHHHHH--HCCSEEEEEECHHHHHHHHHHGGG---CCSCCEEEEEECC
T ss_pred -ccccccc----------------ccchHHHHHHHHHh--cCCCEEEEcchHHHHHHHHHHhcc---CCCCCceeeeccc
Confidence 0000000 00011223444544 389999999766554443333221 1113577888887
Q ss_pred Cchh-hhHHHHHHhccC--EEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHH
Q 046057 870 LEFG-THHIGKAMTYAD--KATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRA 946 (1198)
Q Consensus 870 ~~~~-~~li~~~~~~AD--~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~ 946 (1198)
.... ...++..+..+| .++++|+..++.+... +. ..++.+|+||+|.+.|.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~ii~~S~~~~~~~~~~---~~-~~~~~vi~ngvd~~~~~---------------------- 170 (413)
T 3oy2_A 117 VSKNIRENLWWIFSHPKVVGVMAMSKCWISDICNY---GC-KVPINIVSHFVDTKTIY---------------------- 170 (413)
T ss_dssp CSBSCCGGGGGGGGCTTEEEEEESSTHHHHHHHHT---TC-CSCEEECCCCCCCCCCT----------------------
T ss_pred cchhhHHHHHHHHhccCCceEEEcCHHHHHHHHHc---CC-CCceEEeCCCCCHHHHH----------------------
Confidence 6543 233566778888 9999999999999752 23 47899999999987652
Q ss_pred HHHHHHHHhCCCC-CCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCCh---hhHHHHHHHHHHhCCCC
Q 046057 947 AKEALQQKVGLRK-SDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDP---RIQNDFVNLANELHSSH 1020 (1198)
Q Consensus 947 ~k~aLrq~lGL~~-~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp---~i~~~L~~la~eLgl~~ 1020 (1198)
..+++++++. .+.++|+++||+.+.||++.+++|+..+.+ ++++|+|+|++++. .+.+.++++++++++.
T Consensus 171 ---~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~- 246 (413)
T 3oy2_A 171 ---DARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVD- 246 (413)
T ss_dssp ---THHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCS-
T ss_pred ---HHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcc-
Confidence 2456777762 267899999999999999999999999864 57999999998542 1458899999999984
Q ss_pred CCc-------EEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhh--
Q 046057 1021 ADR-------ARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQ-- 1091 (1198)
Q Consensus 1021 ~dr-------V~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~-- 1091 (1198)
++ +.|.|.++.+.+..+|+.||++|+||.+|+||++++|||+||+|||++++||++|++.++........
T Consensus 247 -~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~ 325 (413)
T 3oy2_A 247 -NVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAW 325 (413)
T ss_dssp -CHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEE
T ss_pred -cccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccc
Confidence 65 77778889999999999999999999999999999999999999999999999999988610000000
Q ss_pred ccCCCCcEE--EEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHH
Q 046057 1092 ALDLEPNGF--SFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLN 1169 (1198)
Q Consensus 1092 ~~~~~~nG~--lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~ 1169 (1198)
..-...+|+ ++++.|+++|+ .+| .+.++++.+.
T Consensus 326 ~~~~~~~G~~gl~~~~d~~~la--------------------------------------------~~i-~l~~~~~~~~ 360 (413)
T 3oy2_A 326 ISVDDRDGIGGIEGIIDVDDLV--------------------------------------------EAF-TFFKDEKNRK 360 (413)
T ss_dssp EECTTTCSSCCEEEECCHHHHH--------------------------------------------HHH-HHTTSHHHHH
T ss_pred cccccccCcceeeCCCCHHHHH--------------------------------------------HHH-HHhcCHHHHH
Confidence 000012399 99999999999 777 7778999988
Q ss_pred HHHHHHH---HhcCChHHHHHHHHHHHHHHhC
Q 046057 1170 SLCKTVM---EQDWSWNRPALDYMELYRAARK 1198 (1198)
Q Consensus 1170 ~L~~~am---~qdfSW~~~A~~yielY~~a~K 1198 (1198)
++++++. .+.|||+.++++|+++|+++++
T Consensus 361 ~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 392 (413)
T 3oy2_A 361 EYGKRVQDFVKTKPTWDDISSDIIDFFNSLLR 392 (413)
T ss_dssp HHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9988884 3689999999999999998864
No 14
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=8.8e-35 Score=329.07 Aligned_cols=355 Identities=16% Similarity=0.185 Sum_probs=260.0
Q ss_pred CCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceec
Q 046057 706 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVE 785 (1198)
Q Consensus 706 ~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~ 785 (1198)
...+|||++|+..+.| ..||.+.++..|+++|+++||+|+++++......... .. . ..
T Consensus 17 ~~~~MkIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~---~~-----~------------~~ 74 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFD--VPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPD---YV-----V------------SG 74 (406)
T ss_dssp ----CEEEEECSSCTT--SCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCT---TE-----E------------EC
T ss_pred CCCcceEEEEeccCCC--CCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCc---cc-----c------------cC
Confidence 4568999999976655 4699999999999999999999999997643211000 00 0 00
Q ss_pred CeEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEE
Q 046057 786 GLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVF 865 (1198)
Q Consensus 786 Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~ 865 (1198)
+ .++.++.... +.+. .+ ...+...+.+++++ .+|||||+|.+....++.++.... ++|+|+
T Consensus 75 ~-~~~~~~~~~~-~~~~-~~--------~~~~~~~l~~~l~~--~~~Dii~~~~~~~~~~~~~~~~~~------~~~~i~ 135 (406)
T 2gek_A 75 G-KAVPIPYNGS-VARL-RF--------GPATHRKVKKWIAE--GDFDVLHIHEPNAPSLSMLALQAA------EGPIVA 135 (406)
T ss_dssp C-CCC--------------C--------CHHHHHHHHHHHHH--HCCSEEEEECCCSSSHHHHHHHHE------ESSEEE
T ss_pred C-cEEeccccCC-cccc-cc--------cHHHHHHHHHHHHh--cCCCEEEECCccchHHHHHHHHhc------CCCEEE
Confidence 0 1111110000 0000 00 00122445566655 389999999876655554444443 789999
Q ss_pred EecCCchhhh-------HHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccc
Q 046057 866 TIHNLEFGTH-------HIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSE 938 (1198)
Q Consensus 866 tIHn~~~~~~-------li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~ 938 (1198)
++|+...... ++...+..+|.++++|+...+.+.. .+ ...++ +|+||+|.+.|.|....
T Consensus 136 ~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~--~~--~~~~~-vi~~~v~~~~~~~~~~~--------- 201 (406)
T 2gek_A 136 TFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLARRWQME--AL--GSDAV-EIPNGVDVASFADAPLL--------- 201 (406)
T ss_dssp EECCCCCSHHHHHHHHSTTHHHHTTCSEEEESSHHHHHHHHH--HH--SSCEE-ECCCCBCHHHHHTCCCC---------
T ss_pred EEcCcchhhhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH--hc--CCCcE-EecCCCChhhcCCCchh---------
Confidence 9999754422 2235678899999999999888753 12 23578 99999998766552210
Q ss_pred hhhhchHHHHHHHHHHhCCCCCCCcEEEEEecC-CCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHH
Q 046057 939 NLVEGKRAAKEALQQKVGLRKSDLPLVGIITRL-THQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANE 1015 (1198)
Q Consensus 939 ~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL-~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~e 1015 (1198)
.+++ .+.++|+++||+ .+.||++.+++|+..+.+ ++++|+|+|+++. +.+++++++
T Consensus 202 ----------------~~~~-~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~----~~l~~~~~~ 260 (406)
T 2gek_A 202 ----------------DGYP-REGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE----DELREQAGD 260 (406)
T ss_dssp ----------------TTCS-CSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH----HHHHHHTGG
T ss_pred ----------------hhcc-CCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH----HHHHHHHHh
Confidence 1122 245799999999 999999999999999975 4799999999842 667777776
Q ss_pred hCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCC-CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccC
Q 046057 1016 LHSSHADRARLCLTYDEPLSHLIYAGADFILVPSI-FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALD 1094 (1198)
Q Consensus 1016 Lgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~-~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~ 1094 (1198)
+ .++|.|+|.++.+++..+|+.||++|+||. .|+||++++|||+||+|+|+++.||+.|++.++
T Consensus 261 ~----~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~----------- 325 (406)
T 2gek_A 261 L----AGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADG----------- 325 (406)
T ss_dssp G----GGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTT-----------
T ss_pred c----cCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCC-----------
Confidence 5 378999999999999999999999999996 999999999999999999999999999999987
Q ss_pred CCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHH
Q 046057 1095 LEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKT 1174 (1198)
Q Consensus 1095 ~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~ 1174 (1198)
.+|+++++.|+++|+++|. .+.++++.+.+++++
T Consensus 326 --~~g~~~~~~d~~~l~~~i~--------------------------------------------~l~~~~~~~~~~~~~ 359 (406)
T 2gek_A 326 --DAGRLVPVDDADGMAAALI--------------------------------------------GILEDDQLRAGYVAR 359 (406)
T ss_dssp --TSSEECCTTCHHHHHHHHH--------------------------------------------HHHHCHHHHHHHHHH
T ss_pred --CceEEeCCCCHHHHHHHHH--------------------------------------------HHHcCHHHHHHHHHH
Confidence 7899999999999996655 444678887888777
Q ss_pred HH--HhcCChHHHHHHHHHHHHHHh
Q 046057 1175 VM--EQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1175 am--~qdfSW~~~A~~yielY~~a~ 1197 (1198)
+. .+.|+|+..+++|+++|++++
T Consensus 360 ~~~~~~~~s~~~~~~~~~~~~~~~~ 384 (406)
T 2gek_A 360 ASERVHRYDWSVVSAQIMRVYETVS 384 (406)
T ss_dssp HHHHGGGGBHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 72 238999999999999999875
No 15
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=3.8e-35 Score=327.24 Aligned_cols=312 Identities=18% Similarity=0.130 Sum_probs=244.6
Q ss_pred CcEEEEEccc--------c---CCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCcee
Q 046057 709 PMHIVHIAVE--------M---APIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEI 777 (1198)
Q Consensus 709 pMKIL~Vs~e--------~---~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i 777 (1198)
+|||++|+.. + .|. ..||.++++..|+++|+++||+|+++++......
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~-~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~-------------------- 61 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQ-GYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG-------------------- 61 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCS-SSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC--------------------
T ss_pred ccEEEEEeccccccCcccccccCcc-cCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC--------------------
Confidence 5999999998 4 332 4699999999999999999999999997633211
Q ss_pred EEeeceecCeEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcC
Q 046057 778 KVWFGKVEGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYG 857 (1198)
Q Consensus 778 ~V~~~~~~Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~g 857 (1198)
..++.++ ... . + ..+.+++++ .+|||||+|.+...... . .
T Consensus 62 ------~~~~~~~--~~~-~----------------~----~~l~~~l~~--~~~Dvi~~~~~~~~~~~---~------~ 101 (342)
T 2iuy_A 62 ------RPGLTVV--PAG-E----------------P----EEIERWLRT--ADVDVVHDHSGGVIGPA---G------L 101 (342)
T ss_dssp ------STTEEEC--SCC-S----------------H----HHHHHHHHH--CCCSEEEECSSSSSCST---T------C
T ss_pred ------CCcceec--cCC-c----------------H----HHHHHHHHh--cCCCEEEECCchhhHHH---H------h
Confidence 0122221 100 0 0 134555555 38999999987654322 1 1
Q ss_pred CCCCeEEEEecCCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCccccc
Q 046057 858 LSKARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTS 937 (1198)
Q Consensus 858 l~~ipvV~tIHn~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~ 937 (1198)
..++| |+++|+...... .+|.++++|+..++.+.. ..++.+|+||+|.+.|.|...
T Consensus 102 ~~~~p-v~~~h~~~~~~~-------~~d~ii~~S~~~~~~~~~-------~~~~~vi~ngvd~~~~~~~~~--------- 157 (342)
T 2iuy_A 102 PPGTA-FISSHHFTTRPV-------NPVGCTYSSRAQRAHCGG-------GDDAPVIPIPVDPARYRSAAD--------- 157 (342)
T ss_dssp CTTCE-EEEEECSSSBCS-------CCTTEEESCHHHHHHTTC-------CTTSCBCCCCBCGGGSCCSTT---------
T ss_pred hcCCC-EEEecCCCCCcc-------cceEEEEcCHHHHHHHhc-------CCceEEEcCCCChhhcCcccc---------
Confidence 23789 999999865422 299999999999998863 468899999999988776321
Q ss_pred chhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhC
Q 046057 938 ENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELH 1017 (1198)
Q Consensus 938 ~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLg 1017 (1198)
.. .+.++|+++||+.++||++.+++|+..+ +++|+|+|+|+. ...+++++++++
T Consensus 158 ------------------~~--~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~~---~~~l~~~~~~~~ 211 (342)
T 2iuy_A 158 ------------------QV--AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAWE---PEYFDEITRRYG 211 (342)
T ss_dssp ------------------CC--CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCCC---HHHHHHHHHHHT
T ss_pred ------------------cC--CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCccc---HHHHHHHHHHhC
Confidence 11 2456899999999999999999999987 899999999863 577888888876
Q ss_pred CCCCCcEEEEccCChHHHHHHHHHccEEEEcCC----------CCCCcHHHHHHHHhCCcEEEeCCccccccccc--ccc
Q 046057 1018 SSHADRARLCLTYDEPLSHLIYAGADFILVPSI----------FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFD--VDH 1085 (1198)
Q Consensus 1018 l~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~----------~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d--~d~ 1085 (1198)
++|+|+|..+.+++..+|+.||++|+||. .|+||++++|||+||+|+|+++.||++|++.+ +
T Consensus 212 ----~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~-- 285 (342)
T 2iuy_A 212 ----STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGE-- 285 (342)
T ss_dssp ----TTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEE--
T ss_pred ----CCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCC--
Confidence 58999999999999999999999999999 89999999999999999999999999999988 7
Q ss_pred chhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCH
Q 046057 1086 DKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGR 1165 (1198)
Q Consensus 1086 ~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~ 1165 (1198)
.+|+++++ |+++|+++|. ++ .+
T Consensus 286 -----------~~g~~~~~-d~~~l~~~i~----------------------------------------~l----~~-- 307 (342)
T 2iuy_A 286 -----------VVGYGTDF-APDEARRTLA----------------------------------------GL----PA-- 307 (342)
T ss_dssp -----------ECCSSSCC-CHHHHHHHHH----------------------------------------TS----CC--
T ss_pred -----------CceEEcCC-CHHHHHHHHH----------------------------------------HH----HH--
Confidence 78999999 9999998877 11 11
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHHHhC
Q 046057 1166 EWLNSLCKTVMEQDWSWNRPALDYMELYRAARK 1198 (1198)
Q Consensus 1166 e~~~~L~~~am~qdfSW~~~A~~yielY~~a~K 1198 (1198)
.+.+++...+.|||+.++++|+++|+++++
T Consensus 308 ---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 308 ---SDEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp ---HHHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 111222234679999999999999998864
No 16
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=99.97 E-value=3.8e-30 Score=315.49 Aligned_cols=328 Identities=15% Similarity=0.141 Sum_probs=254.2
Q ss_pred HHHHHHHHHH-HHhc-----CC----CceEEEECCCChhHHHH-HHHHhhhhcCC--------CCCeEEEEecCCchhh-
Q 046057 815 AFFCHAALEF-LLQG-----GF----HPDIIHCHDWSSAPVAW-LFKDHYVHYGL--------SKARIVFTIHNLEFGT- 874 (1198)
Q Consensus 815 ~~F~~aale~-L~~~-----~~----~PDVIH~Hdw~ta~va~-llk~~y~~~gl--------~~ipvV~tIHn~~~~~- 874 (1198)
.||+.+.++. +++. .+ +|||||||||++++++. +++..+-..++ .+..+++|+|++.+..
T Consensus 263 ~ff~~a~lq~ilr~~~~~~~~l~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egl 342 (796)
T 2c4m_A 263 YFFTSASLQAMIQDHLAHHKDLSNFAEFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEAL 342 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSTTHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTS
T ss_pred HHHHHHHHHHHHHHHHHhCCChhhcCCCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHh
Confidence 3788888886 4421 12 69999999999999888 55443211122 1567999999986521
Q ss_pred ---------------------------------------------------hHHHHHHhccCEEEEeCHHHHHHHhCC--
Q 046057 875 ---------------------------------------------------HHIGKAMTYADKATTVSHTYSKEVAGD-- 901 (1198)
Q Consensus 875 ---------------------------------------------------~li~~~~~~AD~VitVS~~~a~el~~~-- 901 (1198)
++...++..|+.|.+||+.+++++...
T Consensus 343 e~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f 422 (796)
T 2c4m_A 343 EQWDEQIFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETL 422 (796)
T ss_dssp CEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTT
T ss_pred hhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhhh
Confidence 233356788999999999999999742
Q ss_pred -CCCCCCCCcEEEEeCCCCCCCC----CCCCCCCCCcccc-----------------cch------hhhchHHHHHHH--
Q 046057 902 -PAIAPHLHKFYGILNGIDQDMW----DPFNDKFIPVSYT-----------------SEN------LVEGKRAAKEAL-- 951 (1198)
Q Consensus 902 -~~l~~~~~K~~vI~NGID~d~~----~P~~D~~Lp~~ys-----------------~~~------~~~gk~~~k~aL-- 951 (1198)
+.+...+.|+..|.||||+..| +|..+..|+..|+ .++ +.+.|..+|.+|
T Consensus 423 ~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~ 502 (796)
T 2c4m_A 423 ADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAE 502 (796)
T ss_dssp HHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1223345789999999999999 7877666666555 444 457888899984
Q ss_pred --HHHhCCC-CCCCcEEEEEecCCCccCHHH-HHHHHHHhhc---------CCcEEEEEecCCChhhHHH------HHHH
Q 046057 952 --QQKVGLR-KSDLPLVGIITRLTHQKGIHL-IKHAIWRTLD---------RGGQVVLLGSAPDPRIQND------FVNL 1012 (1198)
Q Consensus 952 --rq~lGL~-~~d~plIg~VGRL~~qKGidl-IleAl~~ll~---------~~~qLVIvGsgpdp~i~~~------L~~l 1012 (1198)
++++|+. .++.+++++|.||+.+||+++ +++.+.++.+ .+++||+.|.+ .|.+... +..+
T Consensus 503 ~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA-~P~y~~aK~iIk~i~~v 581 (796)
T 2c4m_A 503 WILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKA-APGYVRAKAIIKLINSI 581 (796)
T ss_dssp HHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCC-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecC-CHhHHHHHHHHHHHHHH
Confidence 8999998 568899999999999999999 8999887753 47899999998 6665554 5555
Q ss_pred HHHhCC--CCCC--cEEEEccCChHHHHHHHHHccEEEEcCC--CCCCcHHHHHHHHhCCcEEEeCCccccccccccccc
Q 046057 1013 ANELHS--SHAD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHD 1086 (1198)
Q Consensus 1013 a~eLgl--~~~d--rV~f~g~~d~~~l~~iyA~ADi~LvPS~--~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~ 1086 (1198)
++-.+. .+++ +|.|+..|+..+.+.++++||++++||+ +|+||+.+|.||.+|+++|.+--|...|+....
T Consensus 582 a~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~v--- 658 (796)
T 2c4m_A 582 ADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSV--- 658 (796)
T ss_dssp HHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHH---
T ss_pred HHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhc---
Confidence 552221 3567 8999999999999999999999999999 999999999999999999987777777775442
Q ss_pred hhhhhccCCCCcEEEEcC--CCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcC
Q 046057 1087 KERAQALDLEPNGFSFDG--ADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDG 1164 (1198)
Q Consensus 1087 ~~~~~~~~~~~nG~lf~~--~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~ 1164 (1198)
+++|||+|.. .++.++... . ++...|..+
T Consensus 659 --------G~~NgF~FG~~~~ev~~l~~~-y----------------------------------------~a~~~y~~~ 689 (796)
T 2c4m_A 659 --------GEENAYIFGARVEELPALRES-Y----------------------------------------KPYELYETV 689 (796)
T ss_dssp --------CGGGSEEESCCTTTHHHHHHT-C----------------------------------------CHHHHHHHS
T ss_pred --------CCCcEEEecCchhhHHHHHHh-h----------------------------------------ChHHHhhcC
Confidence 2379999976 666666522 2 677778788
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHh
Q 046057 1165 REWLNSLCKTVMEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1165 ~e~~~~L~~~am~qdfSW~~~A~~yielY~~a~ 1197 (1198)
++ ++++..++|..+|||+.. .+|.+||..++
T Consensus 690 ~~-~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~ 720 (796)
T 2c4m_A 690 PG-LKRALDALDNGTLNDNNS-GLFYDLKHSLI 720 (796)
T ss_dssp TT-HHHHHHTTTSSSSCCTTC-CHHHHHHHHHH
T ss_pred HH-HHHHHHHHHcCCCCCCCH-HHHHHHHHHHH
Confidence 85 688999999999999988 88999999875
No 17
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.97 E-value=1.9e-30 Score=302.25 Aligned_cols=313 Identities=13% Similarity=0.069 Sum_probs=212.7
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecC
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEG 786 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~G 786 (1198)
..+|||++|+..+.|-...||. ..+..|+++|+++||+|+|+++.... .. .... .+ .+ ... .+.....+
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~-~~v~~la~~L~~~GheV~Vvt~~~~~-~~---~~~~---~~-~~-~~~-~~~~~~~~ 112 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGI-STALKLFEQFDNKKFKKRIILTDATP-NP---KDLQ---SF-KS-FKY-VMPEEDKD 112 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHH-HHHHHHHTTSCTTTCEEEEEESSCCC-CH---HHHG---GG-TT-SEE-CCTTCCCC
T ss_pred CCCceEEEEeCCCCccccccHH-HHHHHHHHHHHHcCCceEEEEecCCC-Ch---HHHH---hh-hc-cce-eeccCCcc
Confidence 4679999999999984224666 46889999999999999999986321 10 0000 00 00 000 00000000
Q ss_pred e--EEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHh-hhhcCCCCCeE
Q 046057 787 L--SVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDH-YVHYGLSKARI 863 (1198)
Q Consensus 787 v--~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~-y~~~gl~~ipv 863 (1198)
+ .+..+.. .+. ..+ . ..+|||||+|.|.++..+..+... ...++....|.
T Consensus 113 ~~~~i~~~~~---~~~----------------------~~~-~-~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (413)
T 2x0d_A 113 FALQIVPFND---RYN----------------------RTI-P-VAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNKI 165 (413)
T ss_dssp CSEEEEECSC---CTT----------------------CCE-E-ECTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCCE
T ss_pred ccceeeeccc---ccc----------------------ccc-c-CCCCCEEEEehHHHHHHHHHhhhhhhhhcccccCcE
Confidence 0 0000000 000 000 0 136999999998877665444211 11123335678
Q ss_pred EEEecCCchh------hh-HHHHHHhccC--EEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcc
Q 046057 864 VFTIHNLEFG------TH-HIGKAMTYAD--KATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVS 934 (1198)
Q Consensus 864 V~tIHn~~~~------~~-li~~~~~~AD--~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ 934 (1198)
++.+|+.... .. +....+..++ .++++|+..++.+...+ ....++.+|+||+|.+.|.|.
T Consensus 166 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~S~~~~~~l~~~g---~~~~~~~~i~~g~d~~~~~~~-------- 234 (413)
T 2x0d_A 166 LYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIAVFNSELLKQYFNNKG---YNFTDEYFFQPKINTTLKNYI-------- 234 (413)
T ss_dssp EEEECSCGGGGSCSSHHHHHHHHTTSCCSCEEEEEESHHHHHHHHHHT---CCCSEEEEECCCCCHHHHTTT--------
T ss_pred EEEEeechhhcCccChHHHHHHHHhccCCceEEEEcCHHHHHHHHHcC---CCCCceEEeCCCcCchhhccc--------
Confidence 8888876432 11 1223334444 58899999999997432 223478999999987654331
Q ss_pred cccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecC-CCccCHHHHHHHHHHhhc--C---CcEEEEEecCCChhhHHH
Q 046057 935 YTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRL-THQKGIHLIKHAIWRTLD--R---GGQVVLLGSAPDPRIQND 1008 (1198)
Q Consensus 935 ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL-~~qKGidlIleAl~~ll~--~---~~qLVIvGsgpdp~i~~~ 1008 (1198)
..+. .+.+.|+++||+ .+.||++.+++|+..+.+ + +++|+++|+++..
T Consensus 235 -------------------~~~~--~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~----- 288 (413)
T 2x0d_A 235 -------------------NDKR--QKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD----- 288 (413)
T ss_dssp -------------------TSCC--CCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-----
T ss_pred -------------------cccc--CCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-----
Confidence 0011 245688999997 689999999999998864 2 3899999998542
Q ss_pred HHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchh
Q 046057 1009 FVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKE 1088 (1198)
Q Consensus 1009 L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~ 1088 (1198)
.++++ .++|+|+|..+.+++..+|+.||++|+||.+|+||++++|||+||+|||++ .||..|+|.++
T Consensus 289 -----~~l~~--~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~----- 355 (413)
T 2x0d_A 289 -----IALGK--GIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWH----- 355 (413)
T ss_dssp -----EEEET--TEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTB-----
T ss_pred -----hhcCC--cCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcC-----
Confidence 24555 368999999999999999999999999999999999999999999999995 56788999887
Q ss_pred hhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1089 RAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1089 ~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+++++.|+++|+++|.
T Consensus 356 --------~~G~lv~~~d~~~la~ai~ 374 (413)
T 2x0d_A 356 --------SNIVSLEQLNPENIAETLV 374 (413)
T ss_dssp --------TTEEEESSCSHHHHHHHHH
T ss_pred --------CCEEEeCCCCHHHHHHHHH
Confidence 8999999999999997777
No 18
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.96 E-value=5.9e-29 Score=278.77 Aligned_cols=339 Identities=13% Similarity=-0.010 Sum_probs=232.9
Q ss_pred CcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeE
Q 046057 709 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLS 788 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~ 788 (1198)
+|||++++. ..||....+..|+++|+++||+|.++++.... .... ....|+.
T Consensus 6 ~mkIl~~~~------~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~-~~~~---------------------~~~~g~~ 57 (364)
T 1f0k_A 6 GKRLMVMAG------GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRM-EADL---------------------VPKHGIE 57 (364)
T ss_dssp -CEEEEECC------SSHHHHHHHHHHHHHHHTTTCEEEEEECTTST-HHHH---------------------GGGGTCE
T ss_pred CcEEEEEeC------CCccchhHHHHHHHHHHHcCCEEEEEecCCcc-hhhh---------------------ccccCCc
Confidence 499999972 35899999999999999999999999975321 0000 0012444
Q ss_pred EEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEec
Q 046057 789 VYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIH 868 (1198)
Q Consensus 789 v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIH 868 (1198)
++.+... .+. ............++......+.+++++ .+|||||+|.....+.+.++.... ++|+|++.|
T Consensus 58 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~------~~p~v~~~~ 127 (364)
T 1f0k_A 58 IDFIRIS-GLR-GKGIKALIAAPLRIFNAWRQARAIMKA--YKPDVVLGMGGYVSGPGGLAAWSL------GIPVVLHEQ 127 (364)
T ss_dssp EEECCCC-CCT-TCCHHHHHTCHHHHHHHHHHHHHHHHH--HCCSEEEECSSTTHHHHHHHHHHT------TCCEEEEEC
T ss_pred eEEecCC-ccC-cCccHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEeCCcCchHHHHHHHHc------CCCEEEEec
Confidence 4444321 110 000000000011122223344555555 389999999765444444444332 799999999
Q ss_pred CCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHH
Q 046057 869 NLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAK 948 (1198)
Q Consensus 869 n~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k 948 (1198)
+.... ...+.....+|.++++|+.. + .++.+|+||+|.+.+.+.
T Consensus 128 ~~~~~-~~~~~~~~~~d~v~~~~~~~---------~----~~~~~i~n~v~~~~~~~~---------------------- 171 (364)
T 1f0k_A 128 NGIAG-LTNKWLAKIATKVMQAFPGA---------F----PNAEVVGNPVRTDVLALP---------------------- 171 (364)
T ss_dssp SSSCC-HHHHHHTTTCSEEEESSTTS---------S----SSCEECCCCCCHHHHTSC----------------------
T ss_pred CCCCc-HHHHHHHHhCCEEEecChhh---------c----CCceEeCCccchhhcccc----------------------
Confidence 86432 12234456799999887643 1 157799999987655431
Q ss_pred HHHHHHhCCCCCCCc-EEEEEecCCCccCHHHHHHHHHHhhcCCcE-EEEEecCCChhhHHHHHHHHHHhCCCCCCcEEE
Q 046057 949 EALQQKVGLRKSDLP-LVGIITRLTHQKGIHLIKHAIWRTLDRGGQ-VVLLGSAPDPRIQNDFVNLANELHSSHADRARL 1026 (1198)
Q Consensus 949 ~aLrq~lGL~~~d~p-lIg~VGRL~~qKGidlIleAl~~ll~~~~q-LVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f 1026 (1198)
..+++++++. +.+ +++++|++.++||++.+++|+..+.+ +++ ++++|+++ .+.+++++.++++ ++|.|
T Consensus 172 -~~~~~~~~~~-~~~~il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~----~~~l~~~~~~~~~---~~v~~ 241 (364)
T 1f0k_A 172 -LPQQRLAGRE-GPVRVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS----QQSVEQAYAEAGQ---PQHKV 241 (364)
T ss_dssp -CHHHHHTTCC-SSEEEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC----HHHHHHHHHHTTC---TTSEE
T ss_pred -hhhhhcccCC-CCcEEEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch----HHHHHHHHhhcCC---CceEE
Confidence 0134567663 445 55566799999999999999999866 788 56688874 3678888888876 46999
Q ss_pred EccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccc--------cccccccchhhhhccCCCCc
Q 046057 1027 CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYD--------TVFDVDHDKERAQALDLEPN 1098 (1198)
Q Consensus 1027 ~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E--------~V~d~d~~~~~~~~~~~~~n 1098 (1198)
+|..+ .+..+|+.||++|+||. |++++|||++|+|+|+++.||.++ ++.+ ..
T Consensus 242 ~g~~~--~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~--------------g~ 301 (364)
T 1f0k_A 242 TEFID--DMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA--------------GA 301 (364)
T ss_dssp ESCCS--CHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT--------------TS
T ss_pred ecchh--hHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC--------------Cc
Confidence 98883 46899999999999993 999999999999999999998753 4433 45
Q ss_pred EEEEcCCC--HHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHH
Q 046057 1099 GFSFDGAD--IAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVM 1176 (1198)
Q Consensus 1099 G~lf~~~D--~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am 1176 (1198)
|+++++.| +++|+++|. .+ +++.+.++++++.
T Consensus 302 g~~~~~~d~~~~~la~~i~--------------------------------------------~l--~~~~~~~~~~~~~ 335 (364)
T 1f0k_A 302 AKIIEQPQLSVDAVANTLA--------------------------------------------GW--SRETLLTMAERAR 335 (364)
T ss_dssp EEECCGGGCCHHHHHHHHH--------------------------------------------TC--CHHHHHHHHHHHH
T ss_pred EEEeccccCCHHHHHHHHH--------------------------------------------hc--CHHHHHHHHHHHH
Confidence 99999988 999995555 33 6777778877773
Q ss_pred --HhcCChHHHHHHHHHHHHHHh
Q 046057 1177 --EQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1177 --~qdfSW~~~A~~yielY~~a~ 1197 (1198)
.+.|+|++++++|+++|++.-
T Consensus 336 ~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 336 AASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp HTCCTTHHHHHHHHHHHHHTTC-
T ss_pred HhhccCHHHHHHHHHHHHHHHHH
Confidence 357999999999999998653
No 19
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.96 E-value=2.7e-29 Score=290.97 Aligned_cols=349 Identities=10% Similarity=0.047 Sum_probs=222.1
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecC
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEG 786 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~G 786 (1198)
..+|||++|+..++| ...+|.+ ..+++.|+++| +|+|++..+.... ..... ....+....... ...+|
T Consensus 12 ~~~MkIl~is~~~~p-~~~~~~~---~~l~~~l~~~G-~V~vi~~~~~~~~--~~~~~-~~~~~~~~~~~~----~~~~g 79 (406)
T 2hy7_A 12 IRRPCYLVLSSHDFR-TPRRANI---HFITDQLALRG-TTRFFSLRYSRLS--RMKGD-MRLPLDDTANTV----VSHNG 79 (406)
T ss_dssp -CCSCEEEEESSCTT-SSSCCHH---HHHHHHHHHHS-CEEEEECSCBTTH--HHHTC-TTGGGGGGTTSE----EEETT
T ss_pred CCCceEEEEecccCC-ChhhhhH---hHHHHHHHhCC-ceEEEEecccHHH--Hhhcc-chhhhhccCccc----eecCC
Confidence 347999999988344 2455644 34677788899 9999953321100 00000 000000000001 12367
Q ss_pred eEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEE
Q 046057 787 LSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFT 866 (1198)
Q Consensus 787 v~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~t 866 (1198)
+.++........+..............|.++...+...+++...++||||.+....+.+..+.+ .+ ++|+|++
T Consensus 80 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~DvIh~~~~~~~~~~~~~~-~~------~~p~v~~ 152 (406)
T 2hy7_A 80 VDCYLWRTTVHPFNTRRSWLRPVEDAMFRWYAAHPPKQLLDWMRESDVIVFESGIAVAFIELAK-RV------NPAAKLV 152 (406)
T ss_dssp EEEEECCBSSCCCCCCCGGGHHHHHHHHHHHHHCCCHHHHHHHHHCSEEEEESSGGGGGHHHHH-HH------CTTSEEE
T ss_pred eEEEeeccccCCccccchhhhccchhHHHHHHHhHHHHHHHHhcCCCEEEECCchHHHHHHHHH-Hh------CCCEEEE
Confidence 7776543211001000000000000001112111112222211258999965533333223333 22 7899999
Q ss_pred ecCCch-h--------hhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCccccc
Q 046057 867 IHNLEF-G--------THHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTS 937 (1198)
Q Consensus 867 IHn~~~-~--------~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~ 937 (1198)
+|+... . ..+++..+..+|.++++|+..++.+... . ++.+|+||+|.+.|.|....
T Consensus 153 ~h~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~---~----~i~vipngvd~~~f~~~~~~-------- 217 (406)
T 2hy7_A 153 YRASDGLSTINVASYIEREFDRVAPTLDVIALVSPAMAAEVVSR---D----NVFHVGHGVDHNLDQLGDPS-------- 217 (406)
T ss_dssp EEESSCHHHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGGCSCS---T----TEEECCCCBCTTHHHHHCSC--------
T ss_pred EeccchhhcccccHHHHHHHHHHHHhCCEEEEcCHHHHHHHHhc---C----CEEEEcCCcChHhcCccccc--------
Confidence 997543 1 2355677889999999999998887532 1 89999999998776541100
Q ss_pred chhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhC
Q 046057 938 ENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELH 1017 (1198)
Q Consensus 938 ~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLg 1017 (1198)
+..+.++|+++||+.+.||+ +.++... .++++|+|+|+|+ +++++
T Consensus 218 --------------------~~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~-----------~~~~~ 262 (406)
T 2hy7_A 218 --------------------PYAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM-----------GRHPG 262 (406)
T ss_dssp --------------------SCCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS-----------CCCTT
T ss_pred --------------------ccCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch-----------HHhcC
Confidence 11234799999999999999 4444332 3689999999884 44556
Q ss_pred CCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHH-------HhCCcEEEeCCccccccccccccchhhh
Q 046057 1018 SSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAM-------RYGSIPVVRKTGGLYDTVFDVDHDKERA 1090 (1198)
Q Consensus 1018 l~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAM-------a~G~PvIvt~tGGl~E~V~d~d~~~~~~ 1090 (1198)
+ .++|+|+|.++.+++..+|+.||++|+||..|+||++++||| +||+|||++++ |.++
T Consensus 263 l--~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~------- 327 (406)
T 2hy7_A 263 Y--GDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGP------- 327 (406)
T ss_dssp C--CTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCS-------
T ss_pred C--CCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccC-------
Confidence 5 478999999999999999999999999999999999999999 99999999987 5554
Q ss_pred hccCCCCcEEE-EcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHH
Q 046057 1091 QALDLEPNGFS-FDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLN 1169 (1198)
Q Consensus 1091 ~~~~~~~nG~l-f~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~ 1169 (1198)
.+|++ |+++|+++|+++|. +++ ++++
T Consensus 328 ------~~G~l~v~~~d~~~la~ai~----------------------------------------~ll----~~~~--- 354 (406)
T 2hy7_A 328 ------YKSRFGYTPGNADSVIAAIT----------------------------------------QAL----EAPR--- 354 (406)
T ss_dssp ------CSSEEEECTTCHHHHHHHHH----------------------------------------HHH----HCCC---
T ss_pred ------cceEEEeCCCCHHHHHHHHH----------------------------------------HHH----hCcc---
Confidence 78999 99999999997777 433 2332
Q ss_pred HHHHHHHHhcCChHHHHHHHHHH--HHHH
Q 046057 1170 SLCKTVMEQDWSWNRPALDYMEL--YRAA 1196 (1198)
Q Consensus 1170 ~L~~~am~qdfSW~~~A~~yiel--Y~~a 1196 (1198)
. ...+.|+|+.++++|+++ |.++
T Consensus 355 -~---~~~~~~sw~~~a~~~~~~~~y~~~ 379 (406)
T 2hy7_A 355 -V---RYRQCLNWSDTTDRVLDPRAYPET 379 (406)
T ss_dssp -C---CCSCCCBHHHHHHHHHCGGGSGGG
T ss_pred -h---hhhhcCCHHHHHHHHHHhhccccc
Confidence 1 223679999999999999 8765
No 20
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=99.96 E-value=2.3e-29 Score=308.55 Aligned_cols=331 Identities=18% Similarity=0.171 Sum_probs=255.8
Q ss_pred HHHHHHHHHH-HHhc-----CC----CceEEEECCCChhHHHH-HHHHhhhhcCC--------CCCeEEEEecCCchhh-
Q 046057 815 AFFCHAALEF-LLQG-----GF----HPDIIHCHDWSSAPVAW-LFKDHYVHYGL--------SKARIVFTIHNLEFGT- 874 (1198)
Q Consensus 815 ~~F~~aale~-L~~~-----~~----~PDVIH~Hdw~ta~va~-llk~~y~~~gl--------~~ipvV~tIHn~~~~~- 874 (1198)
.||+.+.++. +++. .. +|||||||||++++++. +++..+-..++ .+..+++|+|++.+..
T Consensus 273 ~ff~~a~lq~ilr~~~~~~~~~~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egl 352 (796)
T 1l5w_A 273 YFQCACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEAL 352 (796)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGS
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhcCCccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhh
Confidence 3788888876 4422 12 69999999999999888 55443211122 2678999999986531
Q ss_pred ----------------------------------------------------hHHHHHHhccCEEEEeCHHHHHHHhCC-
Q 046057 875 ----------------------------------------------------HHIGKAMTYADKATTVSHTYSKEVAGD- 901 (1198)
Q Consensus 875 ----------------------------------------------------~li~~~~~~AD~VitVS~~~a~el~~~- 901 (1198)
++...++..|+.|.+||+.+++++...
T Consensus 353 e~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~ 432 (796)
T 1l5w_A 353 ERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDL 432 (796)
T ss_dssp CEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTT
T ss_pred hcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHHHhhhhcccCCcccHHHHHHHhcCccccccHHHHHHHHhHH
Confidence 123356788999999999999999742
Q ss_pred --CCCCCCCCcEEEEeCCCCCCCC----CCCCCCCCCcccc----------------cch------hhhchHHHHHHH--
Q 046057 902 --PAIAPHLHKFYGILNGIDQDMW----DPFNDKFIPVSYT----------------SEN------LVEGKRAAKEAL-- 951 (1198)
Q Consensus 902 --~~l~~~~~K~~vI~NGID~d~~----~P~~D~~Lp~~ys----------------~~~------~~~gk~~~k~aL-- 951 (1198)
+.+...+.|+..|.||||+..| +|..+..++..|+ .++ +.+.|..+|.+|
T Consensus 433 f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~ 512 (796)
T 1l5w_A 433 FPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAE 512 (796)
T ss_dssp SHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1223345689999999999999 7877777766665 443 457899999984
Q ss_pred --HHHhCCC-CCCCcEEEEEecCCCccCHHH-HHHHHHHhhc---------CCcEEEEEecCCChhhHHH------HHHH
Q 046057 952 --QQKVGLR-KSDLPLVGIITRLTHQKGIHL-IKHAIWRTLD---------RGGQVVLLGSAPDPRIQND------FVNL 1012 (1198)
Q Consensus 952 --rq~lGL~-~~d~plIg~VGRL~~qKGidl-IleAl~~ll~---------~~~qLVIvGsgpdp~i~~~------L~~l 1012 (1198)
++++|+. .++.+++++|.||+.+||+++ +++.+.++.+ .+++||+.|.+ .|.+... +..+
T Consensus 513 ~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA-~P~y~~aK~iIk~i~~v 591 (796)
T 1l5w_A 513 FVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKA-APGYYLAKNIIFAINKV 591 (796)
T ss_dssp HHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCC-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecC-ChhHHHHHHHHHHHHHH
Confidence 8999998 568899999999999999999 8999888765 57999999998 6665554 5555
Q ss_pred HHHhCC--CCCC--cEEEEccCChHHHHHHHHHccEEEEcCC--CCCCcHHHHHHHHhCCcEEEeCCccccccccccccc
Q 046057 1013 ANELHS--SHAD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHD 1086 (1198)
Q Consensus 1013 a~eLgl--~~~d--rV~f~g~~d~~~l~~iyA~ADi~LvPS~--~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~ 1086 (1198)
++-.+. .+++ +|.|+..|+..+.+.++++||++++||+ +|+||+++|.||.+|+++|.+--|...|+....
T Consensus 592 a~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~v--- 668 (796)
T 1l5w_A 592 ADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKV--- 668 (796)
T ss_dssp HHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHH---
T ss_pred HHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhcc---
Confidence 552221 3457 8999999999999999999999999999 999999999999999999977777777765442
Q ss_pred hhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHH
Q 046057 1087 KERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGRE 1166 (1198)
Q Consensus 1087 ~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e 1166 (1198)
+++|||+|.. +++++.+.-. .+| ++...|..+++
T Consensus 669 --------G~~NgF~FG~-~~~ev~~l~~-----------~~y--------------------------~a~~~y~~~~~ 702 (796)
T 1l5w_A 669 --------GEENIFIFGH-TVEQVKAILA-----------KGY--------------------------DPVKWRKKDKV 702 (796)
T ss_dssp --------CGGGSEECSC-CHHHHHHHHH-----------HCC--------------------------CHHHHHHHCHH
T ss_pred --------CCCcEEEecC-CHHHHHHHHH-----------ccc--------------------------CHHHHhhcCHH
Confidence 2379999977 7777663221 001 67777888885
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHHHHh
Q 046057 1167 WLNSLCKTVMEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1167 ~~~~L~~~am~qdfSW~~~A~~yielY~~a~ 1197 (1198)
++++..++|..+|||+.. .+|.+||..++
T Consensus 703 -~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~ 731 (796)
T 1l5w_A 703 -LDAVLKELESGKYSDGDK-HAFDQMLHSIG 731 (796)
T ss_dssp -HHHHHHHHHHTTTTTTCT-TTTHHHHHHTS
T ss_pred -HHHHHHHHHcCCCCCCcH-HHHHHHHHHHh
Confidence 688999999999999886 88999999875
No 21
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.95 E-value=4.5e-27 Score=279.65 Aligned_cols=298 Identities=14% Similarity=0.047 Sum_probs=215.0
Q ss_pred HHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh---------hhHHHHHHhccCEEE
Q 046057 818 CHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG---------THHIGKAMTYADKAT 888 (1198)
Q Consensus 818 ~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~---------~~li~~~~~~AD~Vi 888 (1198)
.+...+.+...-..+||||+|||+..+++.+++... .++|+++++|..... ...+..++..+|.+.
T Consensus 110 N~~fa~~l~~~~~~~DiV~vHdyhl~~l~~~lr~~~-----~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~ 184 (482)
T 1uqt_A 110 NALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRG-----VNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLG 184 (482)
T ss_dssp HHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHHTT-----CCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECchHHHHHHHHHHhC-----CCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEE
Confidence 333444444433467999999999888888877643 378999999986432 122344566789998
Q ss_pred EeCHHHHHHHhCC------------C--CCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHH
Q 046057 889 TVSHTYSKEVAGD------------P--AIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQK 954 (1198)
Q Consensus 889 tVS~~~a~el~~~------------~--~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~ 954 (1198)
..+..+++.+... . .+.....++.+||||||++.|.|... + +.... +..+|++
T Consensus 185 f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~-------~-----~~~~~-~~~lr~~ 251 (482)
T 1uqt_A 185 FQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAA-------G-----PLPPK-LAQLKAE 251 (482)
T ss_dssp ESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHH-------S-----CCCHH-HHHHHHH
T ss_pred EECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhc-------C-----cchHH-HHHHHHH
Confidence 8888777665310 0 01112357899999999877653100 0 00111 4567888
Q ss_pred hCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcC------CcEEEEEecCCC---h---hhHHHHHHHHHHhCCCCC-
Q 046057 955 VGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDR------GGQVVLLGSAPD---P---RIQNDFVNLANELHSSHA- 1021 (1198)
Q Consensus 955 lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~------~~qLVIvGsgpd---p---~i~~~L~~la~eLgl~~~- 1021 (1198)
++ +.++|+++|||++.||++.+++|+..+++. .++||++|.+.. + .+++.+++++.+++..+.
T Consensus 252 ~~----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~ 327 (482)
T 1uqt_A 252 LK----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQ 327 (482)
T ss_dssp TT----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCB
T ss_pred hC----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhccc
Confidence 86 568999999999999999999999998742 378999996321 1 245667777766543211
Q ss_pred ---CcEEE-EccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCC-----cEEEeCCccccccccccccchhhhhc
Q 046057 1022 ---DRARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGS-----IPVVRKTGGLYDTVFDVDHDKERAQA 1092 (1198)
Q Consensus 1022 ---drV~f-~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~-----PvIvt~tGGl~E~V~d~d~~~~~~~~ 1092 (1198)
..|+| .+.++.+++..+|+.||++|+||.+|+|||+++|||+||+ |+|+|+.+|..+.+.
T Consensus 328 ~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~----------- 396 (482)
T 1uqt_A 328 LGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT----------- 396 (482)
T ss_dssp TTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT-----------
T ss_pred CCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC-----------
Confidence 23665 4667899999999999999999999999999999999997 899999988888872
Q ss_pred cCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHH
Q 046057 1093 LDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLC 1172 (1198)
Q Consensus 1093 ~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~ 1172 (1198)
+|++|+|.|+++++++|. +++. .+++.++.+.
T Consensus 397 -----~g~lv~p~d~~~lA~ai~----------------------------------------~lL~---~~~~~r~~~~ 428 (482)
T 1uqt_A 397 -----SALIVNPYDRDEVAAALD----------------------------------------RALT---MSLAERISRH 428 (482)
T ss_dssp -----TSEEECTTCHHHHHHHHH----------------------------------------HHHT---CCHHHHHHHH
T ss_pred -----CeEEECCCCHHHHHHHHH----------------------------------------HHHc---CCHHHHHHHH
Confidence 389999999999998877 5442 2444445555
Q ss_pred HHHH--HhcCChHHHHHHHHHHHHHH
Q 046057 1173 KTVM--EQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1173 ~~am--~qdfSW~~~A~~yielY~~a 1196 (1198)
+++. ...|||+..+++|++.|+++
T Consensus 429 ~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 429 AEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 5542 24699999999999999875
No 22
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.95 E-value=9.2e-27 Score=277.80 Aligned_cols=332 Identities=12% Similarity=0.017 Sum_probs=230.6
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHH--HHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeecee
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRT--VQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKV 784 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarA--L~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~ 784 (1198)
..+|||++|+..+. .||++.++..|++. +.+.||+|.++++..... ..... .+. .
T Consensus 203 ~~~~rI~~~~~~~~----~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~--~~~~~-----~~~------------~ 259 (568)
T 2vsy_A 203 KGPLRVGFVSNGFG----AHPTGLLTVALFEALQRRQPDLQMHLFATSGDDG--STLRT-----RLA------------Q 259 (568)
T ss_dssp SSCEEEEEEESCSS----SSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCS--CHHHH-----HHH------------H
T ss_pred CCCeEEEEECcccc----cChHHHHHHHHHhhccCCcccEEEEEEECCCCCc--cHHHH-----HHH------------h
Confidence 45799999998774 47899999999999 888999999998642210 00000 000 0
Q ss_pred cCeEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCCh--hHHHHHHHHhhhhcCCCCCe
Q 046057 785 EGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSS--APVAWLFKDHYVHYGLSKAR 862 (1198)
Q Consensus 785 ~Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~t--a~va~llk~~y~~~gl~~ip 862 (1198)
.+ .++.+... . ...+.+++++ .+|||||+++.++ ..++.+.. ...|
T Consensus 260 ~~-~~~~~~~~--------------~-------~~~l~~~i~~--~~~Div~~~~~~~~~~~~~~~~~--------~~~~ 307 (568)
T 2vsy_A 260 AS-TLHDVTAL--------------G-------HLATAKHIRH--HGIDLLFDLRGWGGGGRPEVFAL--------RPAP 307 (568)
T ss_dssp TS-EEEECTTC--------------C-------HHHHHHHHHH--TTCSEEEECSSCTTCSSCHHHHT--------CCSS
T ss_pred cC-eEEECCCC--------------C-------HHHHHHHHHh--CCCCEEEECCCCCCcchHHHHhc--------CCCc
Confidence 01 11111100 0 1224455655 4899999876443 21222211 1468
Q ss_pred EEEEecCCchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhh
Q 046057 863 IVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVE 942 (1198)
Q Consensus 863 vV~tIHn~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~ 942 (1198)
++++.|+..............+|.++++|+.... + ..++.+|||++++....+..+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~-------~---~~~i~~ipn~~~~~~~~~~~~-------------- 363 (568)
T 2vsy_A 308 VQVNWLAYPGTSGAPWMDYVLGDAFALPPALEPF-------Y---SEHVLRLQGAFQPSDTSRVVA-------------- 363 (568)
T ss_dssp EEEEESSSSSCCCCTTCCEEEECTTTSCTTTGGG-------C---SSEEEECSSCSCCCCTTCCCC--------------
T ss_pred eeEeeecCCcccCCCCceEEEECCCcCCcccccC-------C---cceeEcCCCcCCCCCCCCCCC--------------
Confidence 8888886432111000001236667777765432 1 168999999544322111000
Q ss_pred chHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEe-cCCChhhHHHHHHHHHHhCCC
Q 046057 943 GKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLG-SAPDPRIQNDFVNLANELHSS 1019 (1198)
Q Consensus 943 gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvG-sgpdp~i~~~L~~la~eLgl~ 1019 (1198)
+..+|+++|++ +.++++++||+.+ ||++.+++|+..+++ ++++|+|+| +|+ ..+.+++++.++|+.
T Consensus 364 -----~~~~r~~~~~~--~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~---~~~~l~~~~~~~~l~ 432 (568)
T 2vsy_A 364 -----EPPSRTQCGLP--EQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE---ADARLRAFAHAQGVD 432 (568)
T ss_dssp -----CCCCTGGGTCC--TTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT---HHHHHHHHHHHTTCC
T ss_pred -----CCCCccccCCC--CCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH---HHHHHHHHHHHcCCC
Confidence 01235678887 3345669999999 999999999999864 589999999 653 568899999999983
Q ss_pred CCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEE-------eCCc-------ccccccccccc
Q 046057 1020 HADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVV-------RKTG-------GLYDTVFDVDH 1085 (1198)
Q Consensus 1020 ~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIv-------t~tG-------Gl~E~V~d~d~ 1085 (1198)
+++|+|+|..+.+.+..+|+.||++|+||.+ +||++++|||+||+|||+ +++| |++|+|.+
T Consensus 433 -~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~--- 507 (568)
T 2vsy_A 433 -AQRLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA--- 507 (568)
T ss_dssp -GGGEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS---
T ss_pred -hhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC---
Confidence 3799999999988899999999999999999 999999999999999999 9999 99998852
Q ss_pred chhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCH
Q 046057 1086 DKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGR 1165 (1198)
Q Consensus 1086 ~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~ 1165 (1198)
|+++++++|. .+.+++
T Consensus 508 --------------------~~~~la~~i~--------------------------------------------~l~~~~ 523 (568)
T 2vsy_A 508 --------------------DDAAFVAKAV--------------------------------------------ALASDP 523 (568)
T ss_dssp --------------------SHHHHHHHHH--------------------------------------------HHHHCH
T ss_pred --------------------CHHHHHHHHH--------------------------------------------HHhcCH
Confidence 6888885544 455788
Q ss_pred HHHHHHHHHHH-----HhcCChHHHHHHHHHHHHHHh
Q 046057 1166 EWLNSLCKTVM-----EQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1166 e~~~~L~~~am-----~qdfSW~~~A~~yielY~~a~ 1197 (1198)
+.+.+|++++. .+.|+|+.++++|+++|++++
T Consensus 524 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~ 560 (568)
T 2vsy_A 524 AALTALHARVDVLRRASGVFHMDGFADDFGALLQALA 560 (568)
T ss_dssp HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 88888887763 357999999999999999875
No 23
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=99.94 E-value=1.5e-26 Score=284.71 Aligned_cols=315 Identities=17% Similarity=0.157 Sum_probs=239.4
Q ss_pred CceEEEECCCChhHHHH-HHHHhhhhcCCC--------CCeEEEEecCCchhh---------------------------
Q 046057 831 HPDIIHCHDWSSAPVAW-LFKDHYVHYGLS--------KARIVFTIHNLEFGT--------------------------- 874 (1198)
Q Consensus 831 ~PDVIH~Hdw~ta~va~-llk~~y~~~gl~--------~ipvV~tIHn~~~~~--------------------------- 874 (1198)
+|||||||||++++++. +++..+-..++. +..++||+|++.+..
T Consensus 320 ~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f 399 (824)
T 2gj4_A 320 DKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRF 399 (824)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHHH
Confidence 58899999999999888 554432111221 334999999986520
Q ss_pred -----------------------------hHHHHHHhccCEEEEeCHHHHHHHhCC---CCCCCCCCcEEEEeCCCCCCC
Q 046057 875 -----------------------------HHIGKAMTYADKATTVSHTYSKEVAGD---PAIAPHLHKFYGILNGIDQDM 922 (1198)
Q Consensus 875 -----------------------------~li~~~~~~AD~VitVS~~~a~el~~~---~~l~~~~~K~~vI~NGID~d~ 922 (1198)
++...++..|+.|.+||+.+++++... ..+...+.++..|.||||+..
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rr 479 (824)
T 2gj4_A 400 LNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRR 479 (824)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCC
T ss_pred HHHHHHHcCCcHHHHHhhhhhhhcCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhh
Confidence 122246788999999999999999631 122233679999999999999
Q ss_pred C----CCCCCCCCCcc-----------------ccc-chhh----hchHHHHHH----HHHHhCCC-CCCCcEEEEEecC
Q 046057 923 W----DPFNDKFIPVS-----------------YTS-ENLV----EGKRAAKEA----LQQKVGLR-KSDLPLVGIITRL 971 (1198)
Q Consensus 923 ~----~P~~D~~Lp~~-----------------ys~-~~~~----~gk~~~k~a----Lrq~lGL~-~~d~plIg~VGRL 971 (1198)
| +|..+..|... |.. ..+. ..|..+|.+ +++++|+. .++.+++++|.||
T Consensus 480 Wl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl 559 (824)
T 2gj4_A 480 WLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRI 559 (824)
T ss_dssp CCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCC
T ss_pred hcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecc
Confidence 9 78766555543 554 3332 678888887 88899997 5688999999999
Q ss_pred CCccCHHHH-HHHHHHhh---cC------CcEEEEEecCCChhhHHH------HHHHHHHhCCC--CCC--cEEEEccCC
Q 046057 972 THQKGIHLI-KHAIWRTL---DR------GGQVVLLGSAPDPRIQND------FVNLANELHSS--HAD--RARLCLTYD 1031 (1198)
Q Consensus 972 ~~qKGidlI-leAl~~ll---~~------~~qLVIvGsgpdp~i~~~------L~~la~eLgl~--~~d--rV~f~g~~d 1031 (1198)
+.+||++++ ++.+.++. +. +++||+.|.+ .|.+... +..+++.++.+ .++ +|.|+..|+
T Consensus 560 ~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA-~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYd 638 (824)
T 2gj4_A 560 HEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKA-APGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYR 638 (824)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCC-CTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCC
T ss_pred hhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeC-CHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCC
Confidence 999999997 88888774 22 5799999998 6665555 77777765321 245 899999999
Q ss_pred hHHHHHHHHHccEEEEcCC--CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHH
Q 046057 1032 EPLSHLIYAGADFILVPSI--FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAG 1109 (1198)
Q Consensus 1032 ~~~l~~iyA~ADi~LvPS~--~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~ 1109 (1198)
..+.+.++++||++++||+ +|+||+++|.||.+|+++|++--|.-.|+.... +.+|||+|... +++
T Consensus 639 vslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~v-----------G~~Ngf~FG~~-~~e 706 (824)
T 2gj4_A 639 VSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEA-----------GEENFFIFGMR-VED 706 (824)
T ss_dssp HHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHH-----------CGGGSEECSCC-HHH
T ss_pred HHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhcc-----------CCCCEEEeCCc-HHH
Confidence 9999999999999999999 999999999999999999998888777775432 12799999775 777
Q ss_pred HHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHH
Q 046057 1110 VDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDY 1189 (1198)
Q Consensus 1110 La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~y 1189 (1198)
+ .++. + ..+++...|..++.+ +++..++|..+|||... ..|
T Consensus 707 v-~~l~-------~-----------------------------~~~~a~~~Y~~~~~l-~~v~d~i~~g~fs~~~~-~~y 747 (824)
T 2gj4_A 707 V-DRLD-------Q-----------------------------RGYNAQEYYDRIPEL-RQIIEQLSSGFFSPKQP-DLF 747 (824)
T ss_dssp H-HHHH-------H-----------------------------HCCCHHHHHHHCHHH-HHHHHHHHHTTTCTTST-TTT
T ss_pred H-HHHH-------H-----------------------------cCCCHHHHhcCCHHH-HHHHHHHHhCCCCCCCh-HHH
Confidence 6 3443 0 001566666666655 77888899999999998 789
Q ss_pred HHHHHHHh
Q 046057 1190 MELYRAAR 1197 (1198)
Q Consensus 1190 ielY~~a~ 1197 (1198)
.+||..++
T Consensus 748 ~~ly~~l~ 755 (824)
T 2gj4_A 748 KDIVNMLM 755 (824)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 24
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.93 E-value=9.7e-26 Score=253.25 Aligned_cols=274 Identities=14% Similarity=0.050 Sum_probs=193.5
Q ss_pred HHHHHHHHhcCCCceEEEECCC-ChhHHHHHHHHhhhhcCCCCCeEEEEecCCch-------hhhHHHHHH-hccCEEEE
Q 046057 819 HAALEFLLQGGFHPDIIHCHDW-SSAPVAWLFKDHYVHYGLSKARIVFTIHNLEF-------GTHHIGKAM-TYADKATT 889 (1198)
Q Consensus 819 ~aale~L~~~~~~PDVIH~Hdw-~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~-------~~~li~~~~-~~AD~Vit 889 (1198)
..+.+++++ .+|||||+|.. ..++++.++.... ++|+|++.|+... ...+++..+ ..+|.+++
T Consensus 85 ~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~------~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 156 (375)
T 3beo_A 85 EGLDKVMKE--AKPDIVLVHGDTTTTFIASLAAFYN------QIPVGHVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFS 156 (375)
T ss_dssp HHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHHT------TCCEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHH------CCCEEEEecccccccccCCChhHhhhhHHhhhhheeeC
Confidence 345555655 48999999864 2333333333332 7899988886521 122344434 35999999
Q ss_pred eCHHHHHHHhCCCCCCCCCCcEEEEeCC-CCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEE
Q 046057 890 VSHTYSKEVAGDPAIAPHLHKFYGILNG-IDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGII 968 (1198)
Q Consensus 890 VS~~~a~el~~~~~l~~~~~K~~vI~NG-ID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~V 968 (1198)
+|+...+.+... +....++.+|+|| +|...+.+... .+..+++++ + ++..+++++
T Consensus 157 ~s~~~~~~~~~~---g~~~~~i~vi~n~~~d~~~~~~~~~------------------~~~~~~~~~--~-~~~~vl~~~ 212 (375)
T 3beo_A 157 PTAKSATNLQKE---NKDESRIFITGNTAIDALKTTVKET------------------YSHPVLEKL--G-NNRLVLMTA 212 (375)
T ss_dssp SSHHHHHHHHHT---TCCGGGEEECCCHHHHHHHHHCCSS------------------CCCHHHHTT--T-TSEEEEEEC
T ss_pred CCHHHHHHHHHc---CCCcccEEEECChhHhhhhhhhhhh------------------hhHHHHHhc--c-CCCeEEEEe
Confidence 999999888643 3345689999999 78655433110 011233444 2 244578899
Q ss_pred ecCCCc-cCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEE
Q 046057 969 TRLTHQ-KGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFI 1045 (1198)
Q Consensus 969 GRL~~q-KGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~ 1045 (1198)
||+.++ ||++.+++|+..+.+ ++++|++ |.+++..+.+.++++. +. .++|+|++..+...+..+|+.||++
T Consensus 213 gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~---~~--~~~v~~~g~~~~~~~~~~~~~ad~~ 286 (375)
T 3beo_A 213 HRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDIL---GD--YGRIHLIEPLDVIDFHNVAARSYLM 286 (375)
T ss_dssp CCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHH---TT--CTTEEEECCCCHHHHHHHHHTCSEE
T ss_pred cccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHh---hc--cCCEEEeCCCCHHHHHHHHHhCcEE
Confidence 999876 999999999998865 4788654 6665433333333332 32 2689999988877899999999999
Q ss_pred EEcCCCCCCcHHHHHHHHhCCcEEEeC-CccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccc
Q 046057 1046 LVPSIFEPCGLTQLVAMRYGSIPVVRK-TGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHT 1124 (1198)
Q Consensus 1046 LvPS~~EpfGLt~LEAMa~G~PvIvt~-tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~ 1124 (1198)
|+|| |.+++|||++|+|+|+++ +||.++++.+ .+|+++++ |+++|+++|.
T Consensus 287 v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~--------------g~g~~v~~-d~~~la~~i~--------- 337 (375)
T 3beo_A 287 LTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEA--------------GTLKLAGT-DEETIFSLAD--------- 337 (375)
T ss_dssp EECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHT--------------TSEEECCS-CHHHHHHHHH---------
T ss_pred EECC-----CChHHHHHhcCCCEEEecCCCCCceeecC--------------CceEEcCC-CHHHHHHHHH---------
Confidence 9999 778999999999999996 4999998765 47999986 9999996655
Q ss_pred cccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHHHHHHHH
Q 046057 1125 TSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~yielY~ 1194 (1198)
.+.++++.+.+|++++ +...|+|+++++.+.+++.
T Consensus 338 -----------------------------------~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 338 -----------------------------------ELLSDKEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp -----------------------------------HHHHCHHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred -----------------------------------HHHhChHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 4446788878887666 3357999999999988764
No 25
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.93 E-value=3.1e-25 Score=250.39 Aligned_cols=284 Identities=12% Similarity=0.044 Sum_probs=199.6
Q ss_pred HHHHHHHHhcCCCceEEEECCC-ChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh-------hhHHHHH-HhccCEEEE
Q 046057 819 HAALEFLLQGGFHPDIIHCHDW-SSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG-------THHIGKA-MTYADKATT 889 (1198)
Q Consensus 819 ~aale~L~~~~~~PDVIH~Hdw-~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~-------~~li~~~-~~~AD~Vit 889 (1198)
..+.+++++ .+|||||+|+. ...+.+.++... .++|+|++.|+.... ....+.. ...+|.+++
T Consensus 76 ~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~a~~------~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 147 (384)
T 1vgv_A 76 EGLKPILAE--FKPDVVLVHGDTTTTLATSLAAFY------QRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFS 147 (384)
T ss_dssp HHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHT------TTCCEEEESCCCCCSCTTSSTTHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHH------HCCCEEEEecccccccccCCCchHhhHHHHHhhccEEEc
Confidence 445566665 48999999975 334433443332 279999999975311 1233333 345999999
Q ss_pred eCHHHHHHHhCCCCCCCCCCcEEEEeCCC-CCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhC-CCCCCCcEEEE
Q 046057 890 VSHTYSKEVAGDPAIAPHLHKFYGILNGI-DQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVG-LRKSDLPLVGI 967 (1198)
Q Consensus 890 VS~~~a~el~~~~~l~~~~~K~~vI~NGI-D~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lG-L~~~d~plIg~ 967 (1198)
+|+...+.+... +....++.+|+||+ |...+.+. .. ......+..+++++| ++..+..++++
T Consensus 148 ~s~~~~~~l~~~---g~~~~~i~vi~n~~~d~~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~ 211 (384)
T 1vgv_A 148 PTETSRQNLLRE---NVADSRIFITGNTVIDALLWVRD------------QV-MSSDKLRSELAANYPFIDPDKKMILVT 211 (384)
T ss_dssp SSHHHHHHHHHT---TCCGGGEEECCCHHHHHHHHHHH------------HT-TTCHHHHHHHHTTCTTCCTTSEEEEEE
T ss_pred CcHHHHHHHHHc---CCChhhEEEeCChHHHHHHhhhh------------cc-ccchhhhHHHHHhccccCCCCCEEEEE
Confidence 999999888643 33456899999995 42111100 00 000111245677888 75334457889
Q ss_pred EecCCCc-cCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccE
Q 046057 968 ITRLTHQ-KGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADF 1044 (1198)
Q Consensus 968 VGRL~~q-KGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi 1044 (1198)
+||+.++ ||++.+++|+..+.+ ++++|+++++. ++.+.+.+++++. . .++|.|++..+...+..+|+.||+
T Consensus 212 ~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~-~~~~~~~l~~~~~---~--~~~v~~~g~~~~~~~~~~~~~ad~ 285 (384)
T 1vgv_A 212 GHRRESFGRGFEEICHALADIATTHQDIQIVYPVHL-NPNVREPVNRILG---H--VKNVILIDPQEYLPFVWLMNHAWL 285 (384)
T ss_dssp CCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCB-CHHHHHHHHHHHT---T--CTTEEEECCCCHHHHHHHHHHCSE
T ss_pred eCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCC-CHHHHHHHHHHhh---c--CCCEEEeCCCCHHHHHHHHHhCcE
Confidence 9999886 999999999999865 47888885332 3334455555532 2 258999887777788999999999
Q ss_pred EEEcCCCCCCcHHHHHHHHhCCcEEEeCC-ccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhccccccc
Q 046057 1045 ILVPSIFEPCGLTQLVAMRYGSIPVVRKT-GGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFH 1123 (1198)
Q Consensus 1045 ~LvPS~~EpfGLt~LEAMa~G~PvIvt~t-GGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~ 1123 (1198)
+|+|| |.+++|||++|+|+|+++. ||.++++.+ .+|+++++ |+++|+++|.
T Consensus 286 ~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~--------------g~g~lv~~-d~~~la~~i~-------- 337 (384)
T 1vgv_A 286 ILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTA--------------GTVRLVGT-DKQRIVEEVT-------- 337 (384)
T ss_dssp EEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHH--------------TSEEEECS-SHHHHHHHHH--------
T ss_pred EEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhC--------------CceEEeCC-CHHHHHHHHH--------
Confidence 99999 4458999999999999986 999998865 47999987 9999996555
Q ss_pred ccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHHHHHHHHHH
Q 046057 1124 TTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~yielY~~a 1196 (1198)
.+.++++.+.+|++++ +...|+|+++++.+.++|.++
T Consensus 338 ------------------------------------~ll~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 376 (384)
T 1vgv_A 338 ------------------------------------RLLKDENEYQAMSRAHNPYGDGQACSRILEALKNNRISL 376 (384)
T ss_dssp ------------------------------------HHHHCHHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC
T ss_pred ------------------------------------HHHhChHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhh
Confidence 4446888888887766 335799999999999888654
No 26
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.91 E-value=9.3e-24 Score=217.72 Aligned_cols=167 Identities=26% Similarity=0.466 Sum_probs=140.5
Q ss_pred EEeCCCCCCCCC--CCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCC-CccCHHHHHHHHHHhh-
Q 046057 913 GILNGIDQDMWD--PFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLT-HQKGIHLIKHAIWRTL- 988 (1198)
Q Consensus 913 vI~NGID~d~~~--P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~-~qKGidlIleAl~~ll- 988 (1198)
+||||||.+.|. |... .....+..+++++|++ +.++|+++||+. +.||++.+++|+..+.
T Consensus 1 gipngvd~~~f~~~~~~~--------------~~~~~~~~~r~~~~~~--~~~~i~~~G~~~~~~K~~~~li~a~~~l~~ 64 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTG--------------SRDERKKSLLSKFGMD--EGVTFMFIGRFDRGQKGVDVLLKAIEILSS 64 (200)
T ss_dssp ----CCCTTTSSGGGSCS--------------CHHHHHHHHHHHTTCC--SCEEEEEESCBCSSSSCHHHHHHHHHHHTT
T ss_pred CCCCccChhhcccccccc--------------chhhHHHHHHHHcCCC--CCCEEEEeeccccccCCHHHHHHHHHHHHh
Confidence 589999999988 7321 1123356789999997 456999999999 9999999999999985
Q ss_pred -c--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEE-EccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHh
Q 046057 989 -D--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRY 1064 (1198)
Q Consensus 989 -~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f-~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~ 1064 (1198)
+ ++++|+|+|.+ .+.....+++++++++ +|+| ++.++.+.+..+|+.||++|+||.+|+||++++|||++
T Consensus 65 ~~~~~~~~l~i~G~~-~~~~~~~l~~~~~~~~-----~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~ 138 (200)
T 2bfw_A 65 KKEFQEMRFIIIGKG-DPELEGWARSLEEKHG-----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL 138 (200)
T ss_dssp SGGGGGEEEEEECCB-CHHHHHHHHHHHHHCT-----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT
T ss_pred hccCCCeEEEEECCC-ChHHHHHHHHHHHhcC-----CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHC
Confidence 3 37999999997 3345677888888764 7999 99999888999999999999999999999999999999
Q ss_pred CCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 GSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
|+|+|++++||+.+++ ++ .+|+++++.|+++++++|.
T Consensus 139 G~PvI~~~~~~~~e~~-~~-------------~~g~~~~~~~~~~l~~~i~ 175 (200)
T 2bfw_A 139 GAIPIASAVGGLRDII-TN-------------ETGILVKAGDPGELANAIL 175 (200)
T ss_dssp TCEEEEESCHHHHHHC-CT-------------TTCEEECTTCHHHHHHHHH
T ss_pred CCCEEEeCCCChHHHc-CC-------------CceEEecCCCHHHHHHHHH
Confidence 9999999999999999 76 7899999999999996665
No 27
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.91 E-value=5.6e-23 Score=244.34 Aligned_cols=280 Identities=14% Similarity=0.100 Sum_probs=211.1
Q ss_pred CceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh-----------hhHHHHHHhccCEEEEeCHHHHHHHh
Q 046057 831 HPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG-----------THHIGKAMTYADKATTVSHTYSKEVA 899 (1198)
Q Consensus 831 ~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~-----------~~li~~~~~~AD~VitVS~~~a~el~ 899 (1198)
.-|+|..||.+..++|.+++... .+.++.|.+|..... +..+-.+|..+|.|..-++.|++.+.
T Consensus 149 ~~D~VwVhDYhL~llp~~lR~~~-----~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl 223 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALLREQR-----PDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFL 223 (496)
T ss_dssp SSCEEEEESGGGTTHHHHHHHHC-----TTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHH
T ss_pred CCCEEEEeCccHhHHHHHHHhhC-----CCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHH
Confidence 45899999999999999998765 478999999987532 24455788899999999999988753
Q ss_pred CC--CCC--------------CCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCc
Q 046057 900 GD--PAI--------------APHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLP 963 (1198)
Q Consensus 900 ~~--~~l--------------~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~p 963 (1198)
.. ..+ .....++.+||+|||++.|.|.... .+..++++++ +.+
T Consensus 224 ~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~-----------------~~~~lr~~~~----~~~ 282 (496)
T 3t5t_A 224 ESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ-----------------LPEGIEEWAD----GHR 282 (496)
T ss_dssp HHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC-----------------CCTTHHHHHT----TSE
T ss_pred HHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH-----------------HHHHHHHHhC----Cce
Confidence 20 001 1122367899999999988763210 0145677776 578
Q ss_pred EEEEEecCCCccCHHHHHHHHHHhhc--C---CcEEEEEecCC--C-h---hhHHHHHHHHHHhCCCCC-CcEEEEccCC
Q 046057 964 LVGIITRLTHQKGIHLIKHAIWRTLD--R---GGQVVLLGSAP--D-P---RIQNDFVNLANELHSSHA-DRARLCLTYD 1031 (1198)
Q Consensus 964 lIg~VGRL~~qKGidlIleAl~~ll~--~---~~qLVIvGsgp--d-p---~i~~~L~~la~eLgl~~~-drV~f~g~~d 1031 (1198)
+|+++|||++.||+..+++|+ ++++ + .+.||++|... + + .++..+++++.+++.++. ..|+|++..+
T Consensus 283 lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~ 361 (496)
T 3t5t_A 283 LVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDND 361 (496)
T ss_dssp EEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred EEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCC
Confidence 999999999999999999999 8764 2 35688887421 1 1 345667777776653221 1699999889
Q ss_pred hHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhC---CcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHH
Q 046057 1032 EPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYG---SIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIA 1108 (1198)
Q Consensus 1032 ~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G---~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~ 1108 (1198)
.+++..+|+.||++|+||.+|+|||+.+|||+|| .|+|+|..+|..+.+. .+|++|+|.|++
T Consensus 362 ~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~---------------~~allVnP~D~~ 426 (496)
T 3t5t_A 362 VNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG---------------EYCRSVNPFDLV 426 (496)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG---------------GGSEEECTTBHH
T ss_pred HHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC---------------CCEEEECCCCHH
Confidence 9999999999999999999999999999999996 8999999999999984 359999999999
Q ss_pred HHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHH
Q 046057 1109 GVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPA 1186 (1198)
Q Consensus 1109 ~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A 1186 (1198)
+++++|. +++.. .++.++.+.++. ....++++..+
T Consensus 427 ~lA~AI~----------------------------------------~aL~m---~~~er~~r~~~~~~~V~~~d~~~W~ 463 (496)
T 3t5t_A 427 EQAEAIS----------------------------------------AALAA---GPRQRAEAAARRRDAARPWTLEAWV 463 (496)
T ss_dssp HHHHHHH----------------------------------------HHHHC---CHHHHHHHHHHHHHHHTTCBHHHHH
T ss_pred HHHHHHH----------------------------------------HHHcC---CHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 9999988 66654 233333333333 22578999999
Q ss_pred HHHHHHHHH
Q 046057 1187 LDYMELYRA 1195 (1198)
Q Consensus 1187 ~~yielY~~ 1195 (1198)
..|++-+..
T Consensus 464 ~~fl~~L~~ 472 (496)
T 3t5t_A 464 QAQLDGLAA 472 (496)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999987764
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.87 E-value=4.9e-21 Score=216.18 Aligned_cols=271 Identities=11% Similarity=-0.030 Sum_probs=186.1
Q ss_pred HHHHHHHHhcCCCceEEEECCCCh-hHHHHHHHHhhhhcCCCCCeEEEEecCCchh-------hhHHHHH-HhccCEEEE
Q 046057 819 HAALEFLLQGGFHPDIIHCHDWSS-APVAWLFKDHYVHYGLSKARIVFTIHNLEFG-------THHIGKA-MTYADKATT 889 (1198)
Q Consensus 819 ~aale~L~~~~~~PDVIH~Hdw~t-a~va~llk~~y~~~gl~~ipvV~tIHn~~~~-------~~li~~~-~~~AD~Vit 889 (1198)
..+.+++++ .+|||||+|+... .+.+.++.... ++|+|++.|+.... ...++.. ...+|.+++
T Consensus 81 ~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~a~~~------~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (376)
T 1v4v_A 81 PQAARALKE--MGADYVLVHGDTLTTFAVAWAAFLE------GIPVGHVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFA 152 (376)
T ss_dssp HHHHHHHHH--TTCSEEEEESSCHHHHHHHHHHHHT------TCCEEEETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHH--cCCCEEEEeCChHHHHHHHHHHHHh------CCCEEEEeCCCccccccCCCchHHHHHHHHHHhceeeC
Confidence 345555655 5899999996533 33333433332 78987655544211 1233333 356999999
Q ss_pred eCHHHHHHHhCCCCCCCCCCcEEEEeCCC-CCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEE
Q 046057 890 VSHTYSKEVAGDPAIAPHLHKFYGILNGI-DQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGII 968 (1198)
Q Consensus 890 VS~~~a~el~~~~~l~~~~~K~~vI~NGI-D~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~V 968 (1198)
+|+...+.+... +....++.+|+|++ |...+. ..+..+++++ + ++.++++++
T Consensus 153 ~s~~~~~~l~~~---g~~~~ki~vi~n~~~d~~~~~---------------------~~~~~~~~~~--~-~~~~vl~~~ 205 (376)
T 1v4v_A 153 PTPLAKANLLKE---GKREEGILVTGQTGVDAVLLA---------------------AKLGRLPEGL--P-EGPYVTVTM 205 (376)
T ss_dssp SSHHHHHHHHTT---TCCGGGEEECCCHHHHHHHHH---------------------HHHCCCCTTC--C-SSCEEEECC
T ss_pred CCHHHHHHHHHc---CCCcceEEEECCchHHHHhhh---------------------hhhhHHHHhc--C-CCCEEEEEe
Confidence 999999988753 33456899999864 421110 0011122222 2 244577789
Q ss_pred ecCCCccCHHHHHHHHHHhhc--CCcEEEEE-ecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEE
Q 046057 969 TRLTHQKGIHLIKHAIWRTLD--RGGQVVLL-GSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFI 1045 (1198)
Q Consensus 969 GRL~~qKGidlIleAl~~ll~--~~~qLVIv-Gsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~ 1045 (1198)
||+..+||++.+++|+..+.+ ++++|+++ |.+ +..++.+++++. . .++|+|++.+....+..+|+.||++
T Consensus 206 gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~--~~~~~~l~~~~~---~--~~~v~~~g~~g~~~~~~~~~~ad~~ 278 (376)
T 1v4v_A 206 HRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLN--PVVREAVFPVLK---G--VRNFVLLDPLEYGSMAALMRASLLL 278 (376)
T ss_dssp CCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSC--HHHHHHHHHHHT---T--CTTEEEECCCCHHHHHHHHHTEEEE
T ss_pred CcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCC--HHHHHHHHHHhc---c--CCCEEEECCCCHHHHHHHHHhCcEE
Confidence 999888999999999998864 47888886 644 234556666543 1 2589999877766789999999999
Q ss_pred EEcCCCCCCcHHHHHHHHhCCcEEEe-CCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccccc
Q 046057 1046 LVPSIFEPCGLTQLVAMRYGSIPVVR-KTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHT 1124 (1198)
Q Consensus 1046 LvPS~~EpfGLt~LEAMa~G~PvIvt-~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~~~ 1124 (1198)
|+|| .|+ ++|||++|+|+|++ ++||..+++.+ .+|++++ .|+++|+++|.
T Consensus 279 v~~S----~g~-~lEA~a~G~PvI~~~~~~~~~~~~~~--------------g~g~lv~-~d~~~la~~i~--------- 329 (376)
T 1v4v_A 279 VTDS----GGL-QEEGAALGVPVVVLRNVTERPEGLKA--------------GILKLAG-TDPEGVYRVVK--------- 329 (376)
T ss_dssp EESC----HHH-HHHHHHTTCCEEECSSSCSCHHHHHH--------------TSEEECC-SCHHHHHHHHH---------
T ss_pred EECC----cCH-HHHHHHcCCCEEeccCCCcchhhhcC--------------CceEECC-CCHHHHHHHHH---------
Confidence 9999 255 88999999999986 67999887654 4799996 49999995555
Q ss_pred cccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHh
Q 046057 1125 TSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAAR 1197 (1198)
Q Consensus 1125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~a~ 1197 (1198)
.+.++++.+++|++++ ..|+|...++++.++|.+++
T Consensus 330 -----------------------------------~ll~d~~~~~~~~~~~--~~~~~~~~~~~i~~~i~~~~ 365 (376)
T 1v4v_A 330 -----------------------------------GLLENPEELSRMRKAK--NPYGDGKAGLMVARGVAWRL 365 (376)
T ss_dssp -----------------------------------HHHTCHHHHHHHHHSC--CSSCCSCHHHHHHHHHHHHT
T ss_pred -----------------------------------HHHhChHhhhhhcccC--CCCCCChHHHHHHHHHHHHh
Confidence 4457888878887644 56888788888888887654
No 29
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.87 E-value=2.7e-21 Score=193.90 Aligned_cols=160 Identities=11% Similarity=0.128 Sum_probs=132.1
Q ss_pred CcEEEEEecCCCccCHHHHHHHHHHhhc-CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH
Q 046057 962 LPLVGIITRLTHQKGIHLIKHAIWRTLD-RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA 1040 (1198)
Q Consensus 962 ~plIg~VGRL~~qKGidlIleAl~~ll~-~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA 1040 (1198)
+++|+++||+.+.||++.+++|+..+.+ ++++|+|+|+++. ...++++++++++ ++.| +.++.+.+..+|+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~----~v~~-g~~~~~~~~~~~~ 73 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPD---EKKIKLLAQKLGV----KAEF-GFVNSNELLEILK 73 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCSTT---HHHHHHHHHHHTC----EEEC-CCCCHHHHHHHHT
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCcc---HHHHHHHHHHcCC----eEEE-eecCHHHHHHHHH
Confidence 4689999999999999999999999853 4799999999864 5788899998875 6888 8889999999999
Q ss_pred HccEEEEcCCCCCCcHHHHHHHHhCC-cEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcc
Q 046057 1041 GADFILVPSIFEPCGLTQLVAMRYGS-IPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIH 1118 (1198)
Q Consensus 1041 ~ADi~LvPS~~EpfGLt~LEAMa~G~-PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~ 1118 (1198)
.||++|+||.+|+||++++|||+||+ |+|+ ++.||..+++.++ +.++++.|+++++++|.
T Consensus 74 ~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~i~--- 135 (166)
T 3qhp_A 74 TCTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE---------------RSLFEPNNAKDLSAKID--- 135 (166)
T ss_dssp TCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSG---------------GGEECTTCHHHHHHHHH---
T ss_pred hCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCC---------------ceEEcCCCHHHHHHHHH---
Confidence 99999999999999999999999998 9999 6789999999875 33889999999996655
Q ss_pred cccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHH
Q 046057 1119 VSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALD 1188 (1198)
Q Consensus 1119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~ 1188 (1198)
.+.++++.+.++++++ ..+.|||+.++++
T Consensus 136 -----------------------------------------~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 136 -----------------------------------------WWLENKLERERMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp -----------------------------------------HHHHCHHHHHHHHHHHHHHHHHHC-------
T ss_pred -----------------------------------------HHHhCHHHHHHHHHHHHHHHHHCChhhhhcC
Confidence 4446888888888777 3468999998764
No 30
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.82 E-value=6.6e-20 Score=187.69 Aligned_cols=135 Identities=19% Similarity=0.197 Sum_probs=122.4
Q ss_pred CCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHH--HhCCCCCCcEEEEccCChHHHHH
Q 046057 960 SDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLAN--ELHSSHADRARLCLTYDEPLSHL 1037 (1198)
Q Consensus 960 ~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~--eLgl~~~drV~f~g~~d~~~l~~ 1037 (1198)
.+.++|+++||+.+.||++.+++|+..+ ++++|+|+|.+++. ..+++++. ++++ +++|.|++.++.+++..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~---~~l~~~~~~~~~~l--~~~v~~~g~~~~~e~~~ 93 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKG---DHAERYARKIMKIA--PDNVKFLGSVSEEELID 93 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTT---STHHHHHHHHHHHS--CTTEEEEESCCHHHHHH
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccH---HHHHHHHHhhhccc--CCcEEEeCCCCHHHHHH
Confidence 4678999999999999999999999988 68999999998643 46777777 6666 47999999999999999
Q ss_pred HHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1038 IYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1038 iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
+|+.||++|+||..|+||++++|||+||+|+|++++||..+++.++ .+|+++ +.|+++++++|.
T Consensus 94 ~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~-------------~~g~~~-~~d~~~l~~~i~ 157 (177)
T 2f9f_A 94 LYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINE-------------KTGYLV-NADVNEIIDAMK 157 (177)
T ss_dssp HHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBT-------------TTEEEE-CSCHHHHHHHHH
T ss_pred HHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCC-------------CccEEe-CCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999886 789999 999999997776
No 31
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.82 E-value=1.5e-19 Score=207.55 Aligned_cols=229 Identities=12% Similarity=0.016 Sum_probs=160.8
Q ss_pred HHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhhHHHHHHhccCEEEEeCHHHHHHHhC
Q 046057 821 ALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAG 900 (1198)
Q Consensus 821 ale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~li~~~~~~AD~VitVS~~~a~el~~ 900 (1198)
+.+++++ .+|||||++.... .+.++... .. |++++.+.... ..+.+..+..+|.++++|+..++.+..
T Consensus 103 l~~~l~~--~~pDiv~~~~~~~--~~~~~~~~------~~-p~~~~~~~~~~-~~~~~~~~~~~d~ii~~S~~~~~~l~~ 170 (374)
T 2xci_A 103 VKRFEEL--SKPKALIVVEREF--WPSLIIFT------KV-PKILVNAYAKG-SLIEKILSKKFDLIIMRTQEDVEKFKT 170 (374)
T ss_dssp HHHHHHH--HCCSEEEEESCCC--CHHHHHHC------CS-CEEEEEECCCC-CHHHHHHHTTCSEEEESCHHHHHHHHT
T ss_pred HHHHHHH--hCCCEEEEECccC--cHHHHHHH------hC-CEEEEEeecCc-hHHHHHHHHhCCEEEECCHHHHHHHHH
Confidence 4555655 3799999863211 12222211 13 77665554322 226677788999999999999999975
Q ss_pred CCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCHHHH
Q 046057 901 DPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLI 980 (1198)
Q Consensus 901 ~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGidlI 980 (1198)
.+ .. ++.+|+||. |++.... . +. + ..++++++|+ ..||++.+
T Consensus 171 ~g---~~--ki~vi~n~~----f~~~~~~-------~---------------~~--l---~~~vi~~~~~--~~k~~~~l 212 (374)
T 2xci_A 171 FG---AK--RVFSCGNLK----FICQKGK-------G---------------IK--L---KGEFIVAGSI--HTGEVEII 212 (374)
T ss_dssp TT---CC--SEEECCCGG----GCCCCCS-------C---------------CC--C---SSCEEEEEEE--CGGGHHHH
T ss_pred cC---CC--eEEEcCCCc----cCCCcCh-------h---------------hh--h---cCCEEEEEeC--CCchHHHH
Confidence 33 22 899999983 2221100 0 00 1 1256666665 57999999
Q ss_pred HHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCC------CcEEEEccCChHHHHHHHHHccEEEEcCCC-
Q 046057 981 KHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHA------DRARLCLTYDEPLSHLIYAGADFILVPSIF- 1051 (1198)
Q Consensus 981 leAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~------drV~f~g~~d~~~l~~iyA~ADi~LvPS~~- 1051 (1198)
++|+..+.+ ++++|+|+|.+|+ -.+.++++++++++... ++|.|.+..+ ++..+|+.||++++||.+
T Consensus 213 l~A~~~l~~~~p~~~lvivG~g~~--~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~--dl~~~y~~aDv~vl~ss~~ 288 (374)
T 2xci_A 213 LKAFKEIKKTYSSLKLILVPRHIE--NAKIFEKKARDFGFKTSFFENLEGDVILVDRFG--ILKELYPVGKIAIVGGTFV 288 (374)
T ss_dssp HHHHHHHHTTCTTCEEEEEESSGG--GHHHHHHHHHHTTCCEEETTCCCSSEEECCSSS--CHHHHGGGEEEEEECSSSS
T ss_pred HHHHHHHHhhCCCcEEEEECCCHH--HHHHHHHHHHHCCCceEEecCCCCcEEEECCHH--HHHHHHHhCCEEEECCccc
Confidence 999999875 4799999998753 23578888998887421 3577765443 378999999999888765
Q ss_pred CCCcHHHHHHHHhCCcEEEe-CCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1052 EPCGLTQLVAMRYGSIPVVR-KTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1052 EpfGLt~LEAMa~G~PvIvt-~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
|.+|++++|||+||+|||++ +++|++|++.+. ..+|+++...|+++|+++|.
T Consensus 289 e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~------------~~~G~l~~~~d~~~La~ai~ 341 (374)
T 2xci_A 289 NIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL------------EKEGAGFEVKNETELVTKLT 341 (374)
T ss_dssp SSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH------------HHTTCEEECCSHHHHHHHHH
T ss_pred CCCCcCHHHHHHhCCCEEECCCccChHHHHHHH------------HHCCCEEEeCCHHHHHHHHH
Confidence 67899999999999999974 889999998763 03688888999999997776
No 32
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.76 E-value=3.5e-17 Score=186.58 Aligned_cols=161 Identities=10% Similarity=-0.044 Sum_probs=119.4
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA 1040 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA 1040 (1198)
+..+++++|++. .++.+.+..++..+.+.++++++++++.. ..+ ++. ..+++|+|.+..+ +..+|+
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~--~~~-------~l~-~~~~~v~~~~~~~---~~~~l~ 307 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSL--DVS-------GLG-EVPANVRLESWVP---QAALLP 307 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSC--CCT-------TCC-CCCTTEEEESCCC---HHHHGG
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCC--Chh-------hhc-cCCCcEEEeCCCC---HHHHHh
Confidence 345677788886 78888888888877766888888776532 011 111 1257899998883 578999
Q ss_pred HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcc----ccccccccccchhhhhccCCCCcEEEEcCC--CHHHHHHHH
Q 046057 1041 GADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGG----LYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVDYAL 1114 (1198)
Q Consensus 1041 ~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGG----l~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La~AL 1114 (1198)
.||++|.+| .+.+++|||++|+|+|+...++ ..+.+.+. .+|+++++. |+++|+++|
T Consensus 308 ~ad~~v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~-------------g~g~~~~~~~~~~~~l~~ai 370 (412)
T 3otg_A 308 HVDLVVHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-------------GAGDHLLPDNISPDSVSGAA 370 (412)
T ss_dssp GCSEEEESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-------------TSEEECCGGGCCHHHHHHHH
T ss_pred cCcEEEECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-------------CCEEecCcccCCHHHHHHHH
Confidence 999999776 3489999999999999966553 55666554 789999877 889998655
Q ss_pred hhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHHHHHH
Q 046057 1115 NSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALDYMEL 1192 (1198)
Q Consensus 1115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~yiel 1192 (1198)
. .+.++++.+.++.+.+ +...++|+++++.++++
T Consensus 371 ~--------------------------------------------~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 406 (412)
T 3otg_A 371 K--------------------------------------------RLLAEESYRAGARAVAAEIAAMPGPDEVVRLLPGF 406 (412)
T ss_dssp H--------------------------------------------HHHHCHHHHHHHHHHHHHHHHSCCHHHHHTTHHHH
T ss_pred H--------------------------------------------HHHhCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 5 4446788777777666 55678999999999999
Q ss_pred HHHH
Q 046057 1193 YRAA 1196 (1198)
Q Consensus 1193 Y~~a 1196 (1198)
|.+.
T Consensus 407 ~~~~ 410 (412)
T 3otg_A 407 ASRS 410 (412)
T ss_dssp HC--
T ss_pred hccc
Confidence 8653
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.72 E-value=4.3e-16 Score=180.43 Aligned_cols=282 Identities=13% Similarity=0.087 Sum_probs=184.9
Q ss_pred HHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCc-------hhhhHHHHH-HhccCEEE
Q 046057 817 FCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLE-------FGTHHIGKA-MTYADKAT 888 (1198)
Q Consensus 817 F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~-------~~~~li~~~-~~~AD~Vi 888 (1198)
....+.+++++ .+||+||+|+.....++..+...+ .++|++...+... +.....+.. -..+|.++
T Consensus 99 ~~~~l~~~l~~--~kPDvVi~~g~~~~~~~~~~aa~~-----~~IPv~h~~ag~rs~~~~~~~~~~~~r~~~~~~a~~~~ 171 (396)
T 3dzc_A 99 ILLGMQQVLSS--EQPDVVLVHGDTATTFAASLAAYY-----QQIPVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHF 171 (396)
T ss_dssp HHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHT-----TTCCEEEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHh--cCCCEEEEECCchhHHHHHHHHHH-----hCCCEEEEECCccccccccCCcHHHHHHHHHHhcCEEE
Confidence 34455566665 489999999765543332233222 2899876544321 112344444 35789999
Q ss_pred EeCHHHHHHHhCCCCCCCCCCcEEEEeCC-CCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhC-CCCCCCcEEE
Q 046057 889 TVSHTYSKEVAGDPAIAPHLHKFYGILNG-IDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVG-LRKSDLPLVG 966 (1198)
Q Consensus 889 tVS~~~a~el~~~~~l~~~~~K~~vI~NG-ID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lG-L~~~d~plIg 966 (1198)
+.|+..++.+...+ .+..+++++.|. +|...+.+ .. .......+..+++++| ++..+..+++
T Consensus 172 ~~se~~~~~l~~~G---~~~~ki~vvGn~~~d~~~~~~------------~~-~~~~~~~~~~~r~~lg~l~~~~~~vlv 235 (396)
T 3dzc_A 172 APTDTSRANLLQEN---YNAENIFVTGNTVIDALLAVR------------EK-IHTDMDLQATLESQFPMLDASKKLILV 235 (396)
T ss_dssp ESSHHHHHHHHHTT---CCGGGEEECCCHHHHHHHHHH------------HH-HHHCHHHHHHHHHTCTTCCTTSEEEEE
T ss_pred CCCHHHHHHHHHcC---CCcCcEEEECCcHHHHHHHhh------------hh-cccchhhHHHHHHHhCccCCCCCEEEE
Confidence 99999998887543 445689988874 44211100 00 0000111467889999 4532333444
Q ss_pred EEecCC-CccCHHHHHHHHHHhhc--CCcEEEEE-ecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHc
Q 046057 967 IITRLT-HQKGIHLIKHAIWRTLD--RGGQVVLL-GSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGA 1042 (1198)
Q Consensus 967 ~VGRL~-~qKGidlIleAl~~ll~--~~~qLVIv-Gsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~A 1042 (1198)
+.+|.. ..|++..+++|+..+.+ ++++||+. |. ++.+++.++++ ++. .++|.|++.+....+..+|+.|
T Consensus 236 ~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~--~~~~~~~l~~~---~~~--~~~v~~~~~lg~~~~~~l~~~a 308 (396)
T 3dzc_A 236 TGHRRESFGGGFERICQALITTAEQHPECQILYPVHL--NPNVREPVNKL---LKG--VSNIVLIEPQQYLPFVYLMDRA 308 (396)
T ss_dssp ECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCB--CHHHHHHHHHH---TTT--CTTEEEECCCCHHHHHHHHHHC
T ss_pred EECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCC--ChHHHHHHHHH---HcC--CCCEEEeCCCCHHHHHHHHHhc
Confidence 555654 45889999999999875 57898885 54 34444444443 233 3689999888766678999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHhCCcEEEe-CCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhccccc
Q 046057 1043 DFILVPSIFEPCGLTQLVAMRYGSIPVVR-KTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSS 1121 (1198)
Q Consensus 1043 Di~LvPS~~EpfGLt~LEAMa~G~PvIvt-~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~ 1121 (1198)
|++|.+| + |++ +|||++|+|+|++ +.++.++++.++ ++++++. |+++|+++|.
T Consensus 309 d~vv~~S---G-g~~-~EA~a~G~PvV~~~~~~~~~e~v~~G--------------~~~lv~~-d~~~l~~ai~------ 362 (396)
T 3dzc_A 309 HIILTDS---G-GIQ-EEAPSLGKPVLVMRETTERPEAVAAG--------------TVKLVGT-NQQQICDALS------ 362 (396)
T ss_dssp SEEEESC---S-GGG-TTGGGGTCCEEECCSSCSCHHHHHHT--------------SEEECTT-CHHHHHHHHH------
T ss_pred CEEEECC---c-cHH-HHHHHcCCCEEEccCCCcchHHHHcC--------------ceEEcCC-CHHHHHHHHH------
Confidence 9999999 3 444 8999999999997 888888887664 4677754 8888885554
Q ss_pred ccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 046057 1122 FHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYR 1194 (1198)
Q Consensus 1122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~ 1194 (1198)
.+.++++.+.+|.+++ ..|.....+++..+++.
T Consensus 363 --------------------------------------~ll~d~~~~~~m~~~~--~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 363 --------------------------------------LLLTDPQAYQAMSQAH--NPYGDGKACQRIADILA 395 (396)
T ss_dssp --------------------------------------HHHHCHHHHHHHHTSC--CTTCCSCHHHHHHHHHH
T ss_pred --------------------------------------HHHcCHHHHHHHhhcc--CCCcCChHHHHHHHHHh
Confidence 4556788877777665 45777777777766553
No 34
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.67 E-value=6e-16 Score=176.67 Aligned_cols=153 Identities=10% Similarity=-0.028 Sum_probs=96.2
Q ss_pred CCcEEEEEecCCCcc----------CHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccC
Q 046057 961 DLPLVGIITRLTHQK----------GIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTY 1030 (1198)
Q Consensus 961 d~plIg~VGRL~~qK----------GidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~ 1030 (1198)
..++++++|++...| .+..+++|+..+ ++++|+++++++ .+.+. . .+++|++.+..
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~---~~~l~------~--~~~~v~~~~~~ 292 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL---AQTLQ------P--LPEGVLAAGQF 292 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC-------------------CCTTEEEESCC
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc---hhhhc------c--CCCcEEEeCcC
Confidence 456778889997555 355566665444 789999887632 12222 1 25789999887
Q ss_pred ChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC----ccccccccccccchhhhhccCCCCcEEEEcCC-
Q 046057 1031 DEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT----GGLYDTVFDVDHDKERAQALDLEPNGFSFDGA- 1105 (1198)
Q Consensus 1031 d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t----GGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~- 1105 (1198)
+ ...+++.||++|. ++.+.+++|||++|+|+|+... .+..+.+.+. ..|++++..
T Consensus 293 ~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-------------g~g~~~~~~~ 352 (398)
T 4fzr_A 293 P---LSAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-------------GAGVEVPWEQ 352 (398)
T ss_dssp C---HHHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHT-------------TSEEECC---
T ss_pred C---HHHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-------------CCEEecCccc
Confidence 5 4788999999995 4557899999999999999544 3455555544 789999876
Q ss_pred -CHHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCCh
Q 046057 1106 -DIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSW 1182 (1198)
Q Consensus 1106 -D~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW 1182 (1198)
++++|+++|. .+.++++.+.++.+.+ +....+|
T Consensus 353 ~~~~~l~~ai~--------------------------------------------~ll~~~~~~~~~~~~~~~~~~~~~~ 388 (398)
T 4fzr_A 353 AGVESVLAACA--------------------------------------------RIRDDSSYVGNARRLAAEMATLPTP 388 (398)
T ss_dssp ----CHHHHHH--------------------------------------------HHHHCTHHHHHHHHHHHHHTTSCCH
T ss_pred CCHHHHHHHHH--------------------------------------------HHHhCHHHHHHHHHHHHHHHcCCCH
Confidence 6677775554 4446777777776665 5567899
Q ss_pred HHHHHHHHH
Q 046057 1183 NRPALDYME 1191 (1198)
Q Consensus 1183 ~~~A~~yie 1191 (1198)
++++..+++
T Consensus 389 ~~~~~~l~~ 397 (398)
T 4fzr_A 389 ADIVRLIEQ 397 (398)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 998877643
No 35
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.66 E-value=2.1e-15 Score=175.24 Aligned_cols=276 Identities=12% Similarity=0.067 Sum_probs=181.0
Q ss_pred HHHHHHHHHHhcCCCceEEEECCCChhHHH-HHHHHhhhhcCCCCCeEEEEecCC---c----hhhhHHHHHH-hccCEE
Q 046057 817 FCHAALEFLLQGGFHPDIIHCHDWSSAPVA-WLFKDHYVHYGLSKARIVFTIHNL---E----FGTHHIGKAM-TYADKA 887 (1198)
Q Consensus 817 F~~aale~L~~~~~~PDVIH~Hdw~ta~va-~llk~~y~~~gl~~ipvV~tIHn~---~----~~~~li~~~~-~~AD~V 887 (1198)
....+.+++++ .+||+||+|+-....++ .+..... ++|++...... . +.....+..+ ..+|.+
T Consensus 102 ~~~~l~~~l~~--~kPD~Vi~~gd~~~~l~~~laA~~~------~IPv~h~~aglrs~~~~~~~p~~~~r~~~~~~a~~~ 173 (403)
T 3ot5_A 102 VMNGINEVIAA--ENPDIVLVHGDTTTSFAAGLATFYQ------QKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIH 173 (403)
T ss_dssp HHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHHT------TCEEEEESCCCCCSCTTSSTTHHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHH--cCCCEEEEECCchhHHHHHHHHHHh------CCCEEEEECCccccccccCCcHHHHHHHHHHhcCEE
Confidence 34455566665 48999999975443333 3333322 89986554332 1 1123444444 458999
Q ss_pred EEeCHHHHHHHhCCCCCCCCCCcEEEEeC-CCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEE
Q 046057 888 TTVSHTYSKEVAGDPAIAPHLHKFYGILN-GIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVG 966 (1198)
Q Consensus 888 itVS~~~a~el~~~~~l~~~~~K~~vI~N-GID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg 966 (1198)
++.|+..++.+...+ .+..+++++.| ++|...+.+... .+..+++++ + .+..+++
T Consensus 174 ~~~se~~~~~l~~~G---i~~~~i~vvGn~~~D~~~~~~~~~------------------~~~~~~~~l--~-~~~~vlv 229 (403)
T 3ot5_A 174 FSPTKQAKENLLAEG---KDPATIFVTGNTAIDALKTTVQKD------------------YHHPILENL--G-DNRLILM 229 (403)
T ss_dssp EESSHHHHHHHHHTT---CCGGGEEECCCHHHHHHHHHSCTT------------------CCCHHHHSC--T-TCEEEEE
T ss_pred ECCCHHHHHHHHHcC---CCcccEEEeCCchHHHHHhhhhhh------------------cchHHHHhc--c-CCCEEEE
Confidence 999999999887544 34578999988 456432221100 001233444 2 2344566
Q ss_pred EEecCCC-ccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHcc
Q 046057 967 IITRLTH-QKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGAD 1043 (1198)
Q Consensus 967 ~VGRL~~-qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~AD 1043 (1198)
+++|... .|++..+++|+..+.+ ++++||+.+. +.+..++.++++ ++. .++|++++..+...+..+|+.||
T Consensus 230 ~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~-~~~~~~~~l~~~---~~~--~~~v~l~~~l~~~~~~~l~~~ad 303 (403)
T 3ot5_A 230 TAHRRENLGEPMQGMFEAVREIVESREDTELVYPMH-LNPAVREKAMAI---LGG--HERIHLIEPLDAIDFHNFLRKSY 303 (403)
T ss_dssp CCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECC-SCHHHHHHHHHH---HTT--CTTEEEECCCCHHHHHHHHHHEE
T ss_pred EeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecC-CCHHHHHHHHHH---hCC--CCCEEEeCCCCHHHHHHHHHhcC
Confidence 6777643 4789999999998875 5788888743 234344444433 333 26899999888777899999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHhCCcEEEe-CCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcccccc
Q 046057 1044 FILVPSIFEPCGLTQLVAMRYGSIPVVR-KTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSF 1122 (1198)
Q Consensus 1044 i~LvPS~~EpfGLt~LEAMa~G~PvIvt-~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~~~~~ 1122 (1198)
++|.+| |-+++|||++|+|+|+. ++|+.++++.. .+|+++.. |+++|+++|.
T Consensus 304 ~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~--------------g~~~lv~~-d~~~l~~ai~------- 356 (403)
T 3ot5_A 304 LVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEA--------------GTLKLIGT-NKENLIKEAL------- 356 (403)
T ss_dssp EEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHH--------------TSEEECCS-CHHHHHHHHH-------
T ss_pred EEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeC--------------CcEEEcCC-CHHHHHHHHH-------
Confidence 999998 44559999999999997 78888888754 47888876 8999985555
Q ss_pred cccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 046057 1123 HTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAA 1196 (1198)
Q Consensus 1123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~qdfSW~~~A~~yielY~~a 1196 (1198)
.+.++++.+.+|.+++ ..|.....+++..+++.+.
T Consensus 357 -------------------------------------~ll~~~~~~~~m~~~~--~~~g~~~aa~rI~~~l~~~ 391 (403)
T 3ot5_A 357 -------------------------------------DLLDNKESHDKMAQAA--NPYGDGFAANRILAAIKSH 391 (403)
T ss_dssp -------------------------------------HHHHCHHHHHHHHHSC--CTTCCSCHHHHHHHHHHHH
T ss_pred -------------------------------------HHHcCHHHHHHHHhhc--CcccCCcHHHHHHHHHHHH
Confidence 4446787777776554 3466666666666665544
No 36
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.61 E-value=5.7e-14 Score=161.73 Aligned_cols=159 Identities=12% Similarity=0.002 Sum_probs=108.8
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhc-CCcEEE-EEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLD-RGGQVV-LLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLI 1038 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~-~~~qLV-IvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~i 1038 (1198)
+..+++++|++. .++.+.+..++..+.+ ++++++ ++|.+++.. .+ . ..+++|.+.+..++. .+
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~---~l-------~-~~~~~v~~~~~~~~~---~~ 296 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPA---EL-------G-ELPDNVEVHDWVPQL---AI 296 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CGG---GG-------C-SCCTTEEEESSCCHH---HH
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChH---Hh-------c-cCCCCeEEEecCCHH---HH
Confidence 345788899998 5666666666555544 378884 678764321 11 1 125789999887763 68
Q ss_pred HHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcc----ccccccccccchhhhhccCCCCcEEEEcCC--CHHHHHH
Q 046057 1039 YAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGG----LYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVDY 1112 (1198)
Q Consensus 1039 yA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGG----l~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La~ 1112 (1198)
|+.||++|..+- +.+++|||++|+|+|+...++ ..+.+.+. .+|+.++.. ++++|++
T Consensus 297 l~~ad~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-------------g~g~~~~~~~~~~~~l~~ 359 (430)
T 2iyf_A 297 LRQADLFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-------------GVARKLATEEATADLLRE 359 (430)
T ss_dssp HTTCSEEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-------------TSEEECCCC-CCHHHHHH
T ss_pred hhccCEEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-------------CCEEEcCCCCCCHHHHHH
Confidence 999999998652 379999999999999988765 23444433 679999876 7888886
Q ss_pred HHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHHHH
Q 046057 1113 ALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALDYM 1190 (1198)
Q Consensus 1113 AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~yi 1190 (1198)
+|. .+.++++.+.++.+.+ +...++++++++.++
T Consensus 360 ~i~--------------------------------------------~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 360 TAL--------------------------------------------ALVDDPEVARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp HHH--------------------------------------------HHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHH--------------------------------------------HHHcCHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 655 3445677666666555 344679999999888
Q ss_pred HHHHH
Q 046057 1191 ELYRA 1195 (1198)
Q Consensus 1191 elY~~ 1195 (1198)
++|.+
T Consensus 396 ~~~~~ 400 (430)
T 2iyf_A 396 AELPA 400 (430)
T ss_dssp TTSCC
T ss_pred HHhhc
Confidence 87654
No 37
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.60 E-value=3.6e-13 Score=154.12 Aligned_cols=348 Identities=14% Similarity=0.033 Sum_probs=190.6
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCeEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSV 789 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv~v 789 (1198)
.||++.+. .+||--.-...|+++|+++||+|.+++...+ +....+ ...|+++
T Consensus 3 ~~i~i~~G------GTgGHi~palala~~L~~~g~~V~~vg~~~g-~e~~~v---------------------~~~g~~~ 54 (365)
T 3s2u_A 3 GNVLIMAG------GTGGHVFPALACAREFQARGYAVHWLGTPRG-IENDLV---------------------PKAGLPL 54 (365)
T ss_dssp CEEEEECC------SSHHHHHHHHHHHHHHHHTTCEEEEEECSSS-THHHHT---------------------GGGTCCE
T ss_pred CcEEEEcC------CCHHHHHHHHHHHHHHHhCCCEEEEEECCch-Hhhchh---------------------hhcCCcE
Confidence 47887641 2344333367899999999999999975421 110000 1123334
Q ss_pred EEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecC
Q 046057 790 YFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHN 869 (1198)
Q Consensus 790 ~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn 869 (1198)
+.++.. ++ .+...........++..-...+.+++++ .+||+|+++....+..+.+..... ++|+|++-.|
T Consensus 55 ~~i~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~PDvVi~~g~~~s~p~~laA~~~------~iP~vihe~n 124 (365)
T 3s2u_A 55 HLIQVS-GL-RGKGLKSLVKAPLELLKSLFQALRVIRQ--LRPVCVLGLGGYVTGPGGLAARLN------GVPLVIHEQN 124 (365)
T ss_dssp EECC----------------CHHHHHHHHHHHHHHHHH--HCCSEEEECSSSTHHHHHHHHHHT------TCCEEEEECS
T ss_pred EEEECC-Cc-CCCCHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEcCCcchHHHHHHHHHc------CCCEEEEecc
Confidence 443321 11 0000000001111222112334455555 489999998766554444444433 8999976666
Q ss_pred CchhhhHHHHHHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHH
Q 046057 870 LEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKE 949 (1198)
Q Consensus 870 ~~~~~~li~~~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~ 949 (1198)
...+. ..+.....++.+.+..+.. + ....+..++.|.+....+.+..
T Consensus 125 ~~~G~-~nr~l~~~a~~v~~~~~~~---------~-~~~~k~~~~g~pvr~~~~~~~~---------------------- 171 (365)
T 3s2u_A 125 AVAGT-ANRSLAPIARRVCEAFPDT---------F-PASDKRLTTGNPVRGELFLDAH---------------------- 171 (365)
T ss_dssp SSCCH-HHHHHGGGCSEEEESSTTS---------S-CC---CEECCCCCCGGGCCCTT----------------------
T ss_pred hhhhh-HHHhhccccceeeeccccc---------c-cCcCcEEEECCCCchhhccchh----------------------
Confidence 55442 1223446788877654321 1 2234566667777655543211
Q ss_pred HHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc-CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEc
Q 046057 950 ALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD-RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCL 1028 (1198)
Q Consensus 950 aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~-~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g 1028 (1198)
.+.+++.....++++.|++...+..+.+.+|+..+.. .+++++++.+..+ .+.+.+...+++ .++.+.+
T Consensus 172 ---~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~---~~~~~~~~~~~~----~~~~v~~ 241 (365)
T 3s2u_A 172 ---ARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH---AEITAERYRTVA----VEADVAP 241 (365)
T ss_dssp ---SSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT---HHHHHHHHHHTT----CCCEEES
T ss_pred ---hhcccCCCCcEEEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc---cccccceecccc----ccccccc
Confidence 1233432233355556788888888889999988754 3566655432212 234444555554 3567766
Q ss_pred cCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCC--C
Q 046057 1029 TYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGA--D 1106 (1198)
Q Consensus 1029 ~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D 1106 (1198)
.+++ +..+|+.||++|.-+ -+.|+.|+|++|+|.|.....+..+ |++..-|+.......|++++.. +
T Consensus 242 f~~d--m~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~-----~~Q~~NA~~l~~~G~a~~l~~~~~~ 310 (365)
T 3s2u_A 242 FISD--MAAAYAWADLVICRA----GALTVSELTAAGLPAFLVPLPHAID-----DHQTRNAEFLVRSGAGRLLPQKSTG 310 (365)
T ss_dssp CCSC--HHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEECC-----C-----CHHHHHHHHHHTTTSEEECCTTTCC
T ss_pred chhh--hhhhhccceEEEecC----CcchHHHHHHhCCCeEEeccCCCCC-----cHHHHHHHHHHHCCCEEEeecCCCC
Confidence 6554 689999999999654 4799999999999999866543221 1122222222222568888755 4
Q ss_pred HHHHHHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHH--hcCChHH
Q 046057 1107 IAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVME--QDWSWNR 1184 (1198)
Q Consensus 1107 ~~~La~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~--qdfSW~~ 1184 (1198)
++.|+++| ..+.+|++.+++|.+++.+ .....++
T Consensus 311 ~~~L~~~i--------------------------------------------~~ll~d~~~~~~m~~~a~~~~~~~aa~~ 346 (365)
T 3s2u_A 311 AAELAAQL--------------------------------------------SEVLMHPETLRSMADQARSLAKPEATRT 346 (365)
T ss_dssp HHHHHHHH--------------------------------------------HHHHHCTHHHHHHHHHHHHTCCTTHHHH
T ss_pred HHHHHHHH--------------------------------------------HHHHCCHHHHHHHHHHHHhcCCccHHHH
Confidence 77888444 4555788888999888733 2233445
Q ss_pred HHHHHHHHH
Q 046057 1185 PALDYMELY 1193 (1198)
Q Consensus 1185 ~A~~yielY 1193 (1198)
+++..+++.
T Consensus 347 ia~~i~~la 355 (365)
T 3s2u_A 347 VVDACLEVA 355 (365)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 555555443
No 38
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.56 E-value=2.3e-13 Score=155.28 Aligned_cols=210 Identities=11% Similarity=-0.007 Sum_probs=146.3
Q ss_pred CCCceEEEECCCC--hhH-HHHHHHHhhhhcCCCCCeEEEEecCCchhh--------hHHHHHHhccCEEEEeCHHHHHH
Q 046057 829 GFHPDIIHCHDWS--SAP-VAWLFKDHYVHYGLSKARIVFTIHNLEFGT--------HHIGKAMTYADKATTVSHTYSKE 897 (1198)
Q Consensus 829 ~~~PDVIH~Hdw~--ta~-va~llk~~y~~~gl~~ipvV~tIHn~~~~~--------~li~~~~~~AD~VitVS~~~a~e 897 (1198)
-.++|+|+.+... +.. ...+++... ..++|+|+.+|++.... ...+..++.||.++++|+.+.+.
T Consensus 72 ~~~~DvIi~q~P~~~~~~~~~~~~~~lk----~~~~k~i~~ihDl~pl~~~~~~~~~~~E~~~y~~aD~Ii~~S~~~~~~ 147 (339)
T 3rhz_A 72 LRHGDVVIFQTPTWNTTEFDEKLMNKLK----LYDIKIVLFIHDVVPLMFSGNFYLMDRTIAYYNKADVVVAPSQKMIDK 147 (339)
T ss_dssp CCTTCEEEEEECCSSCHHHHHHHHHHHT----TSSCEEEEEESCCHHHHCGGGGGGHHHHHHHHTTCSEEEESCHHHHHH
T ss_pred CCCCCEEEEeCCCcchhhHHHHHHHHHH----hcCCEEEEEecccHHhhCccchhhHHHHHHHHHHCCEEEECCHHHHHH
Confidence 3579999987532 222 233333221 12899999999997642 23466789999999999999999
Q ss_pred HhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccCH
Q 046057 898 VAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGI 977 (1198)
Q Consensus 898 l~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKGi 977 (1198)
+...+ ....++. ++++ |+...+. +. ..+ .+.++|+|+|++.....+
T Consensus 148 l~~~G---~~~~ki~--~~~~----~~~~~~~--~~----------------------~~~-~~~~~i~yaG~l~k~~~L 193 (339)
T 3rhz_A 148 LRDFG---MNVSKTV--VQGM----WDHPTQA--PM----------------------FPA-GLKREIHFPGNPERFSFV 193 (339)
T ss_dssp HHHTT---CCCSEEE--ECCS----CCCCCCC--CC----------------------CCC-EEEEEEEECSCTTTCGGG
T ss_pred HHHcC---CCcCcee--ecCC----CCccCcc--cc----------------------ccc-CCCcEEEEeCCcchhhHH
Confidence 97544 2334553 3332 3221110 00 011 245789999999843222
Q ss_pred HHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCC------
Q 046057 978 HLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIF------ 1051 (1198)
Q Consensus 978 dlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~------ 1051 (1198)
. .+ .++++|+|+|+|++. .+ + +|.|+|.++.+++..+|+.+|+.+++...
T Consensus 194 ~-------~l-~~~~~f~ivG~G~~~-------------~l--~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~ 249 (339)
T 3rhz_A 194 K-------EW-KYDIPLKVYTWQNVE-------------LP--Q-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQ 249 (339)
T ss_dssp G-------GC-CCSSCEEEEESCCCC-------------CC--T-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHH
T ss_pred H-------hC-CCCCeEEEEeCCccc-------------Cc--C-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHH
Confidence 1 12 368999999999642 12 4 89999999999999999989998886110
Q ss_pred -CCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1052 -EPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1052 -EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
..+|..++|+|++|+|+|++..|++.++|.++ .+|+.++ +.++++.+|.
T Consensus 250 ~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~-------------~~G~~~~--~~~e~~~~i~ 299 (339)
T 3rhz_A 250 SLYCSYKLGSFLAAGIPVIVQEGIANQELIENN-------------GLGWIVK--DVEEAIMKVK 299 (339)
T ss_dssp TTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHH-------------TCEEEES--SHHHHHHHHH
T ss_pred HhcChHHHHHHHHcCCCEEEccChhHHHHHHhC-------------CeEEEeC--CHHHHHHHHH
Confidence 24688999999999999999999999999987 8899997 4677775554
No 39
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.55 E-value=4.4e-13 Score=153.21 Aligned_cols=154 Identities=13% Similarity=-0.007 Sum_probs=108.9
Q ss_pred CCcEEEEEecCCCc-cCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 961 DLPLVGIITRLTHQ-KGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 961 d~plIg~VGRL~~q-KGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
..++++++|++... ++.+.+..++..+.+.++++|+++++++.. .+. ..+++|++.+..+ ...++
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~----------~l~-~~~~~v~~~~~~~---~~~ll 297 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDIS----------PLG-TLPRNVRAVGWTP---LHTLL 297 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCG----------GGC-SCCTTEEEESSCC---HHHHH
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChh----------hhc-cCCCcEEEEccCC---HHHHH
Confidence 44577778999665 466666666655555589999998774321 111 1257899998874 46789
Q ss_pred HHccEEEEcCCCCCCcHHHHHHHHhCCcEEE----eCCcccc--ccccccccchhhhhccCCCCcEEEEcCC--CHHHHH
Q 046057 1040 AGADFILVPSIFEPCGLTQLVAMRYGSIPVV----RKTGGLY--DTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVD 1111 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfGLt~LEAMa~G~PvIv----t~tGGl~--E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La 1111 (1198)
+.||++|.. +.+.+++|||++|+|+|+ .+..+.. +.+.+. ..|+.++.. +++.|+
T Consensus 298 ~~ad~~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~-------------g~g~~~~~~~~~~~~l~ 360 (398)
T 3oti_A 298 RTCTAVVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR-------------GIGLVSTSDKVDADLLR 360 (398)
T ss_dssp TTCSEEEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH-------------TSEEECCGGGCCHHHHH
T ss_pred hhCCEEEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC-------------CCEEeeCCCCCCHHHHH
Confidence 999999954 456899999999999999 4556666 666654 789998765 455554
Q ss_pred HHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHHH
Q 046057 1112 YALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALDY 1189 (1198)
Q Consensus 1112 ~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~y 1189 (1198)
.+.++++.+.++.+.+ +....+|++++..+
T Consensus 361 ------------------------------------------------~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 361 ------------------------------------------------RLIGDESLRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp ------------------------------------------------HHHHCHHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred ------------------------------------------------HHHcCHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 2234677666665555 56678999999988
Q ss_pred HHHH
Q 046057 1190 MELY 1193 (1198)
Q Consensus 1190 ielY 1193 (1198)
++++
T Consensus 393 ~~l~ 396 (398)
T 3oti_A 393 VERI 396 (398)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8775
No 40
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=99.53 E-value=1.2e-14 Score=138.41 Aligned_cols=82 Identities=16% Similarity=0.229 Sum_probs=67.2
Q ss_pred ecccCCCCCeEEEEEcccCCCCCCCCcEEEEeecCC--ccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcCCc
Q 046057 268 YPQVVKPDQDIEVFLNRSLSTLKNEPDVLIMGAFND--WRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQN 345 (1198)
Q Consensus 268 ~P~~~~aG~~v~v~yN~~l~~L~~~~~v~ih~GfN~--W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg~~ 345 (1198)
.|+|+. |+.|+|||+ ++.+.++||+|+++ |..+.. .+|.+.. ..+||.++|++|. +..|+|||.||++
T Consensus 3 ~~~p~~-g~~vTvyY~------sg~~~~ylHy~~~~g~Wt~vpg-v~M~~~~-~~Gw~~~TI~~~~-~~~l~~~F~dG~~ 72 (102)
T 2c3v_A 3 HMASGD-ATDITIYYK------TGWTHPHIHYSLNQGAWTTLPG-VPLTKSE-XEGXVKVTIEAEE-GSQLRAAFNNGSG 72 (102)
T ss_dssp -----C-CCSEEEEEE------CCCSSCEEEEEETTCCBCCTTC-EECEECS-STTEEEEEECCCT-TCEEEEEEECSSS
T ss_pred CCCCCC-CCEEEEEEc------CCCCcEEEEEeCCCCCcccCCC-cCccccc-cCCceEEEEecCC-CceEEEEEeCCCc
Confidence 366655 999999999 57899999999964 988888 6676643 3679999999975 6999999999999
Q ss_pred ccccCCCCceEEEE
Q 046057 346 IYENNDQKDFCIAV 359 (1198)
Q Consensus 346 ~wDNN~g~d~~~~V 359 (1198)
+||||+|+||++..
T Consensus 73 ~WDNN~g~Ny~~~~ 86 (102)
T 2c3v_A 73 QWDNNQGRDYDFSS 86 (102)
T ss_dssp CEECGGGTCEEEES
T ss_pred ccccCCCcceEECC
Confidence 99999999999964
No 41
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.52 E-value=8e-14 Score=158.30 Aligned_cols=159 Identities=11% Similarity=0.033 Sum_probs=107.1
Q ss_pred CCcEEEEEecCCCccCH-HHHHHHHHHhhcC-CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGI-HLIKHAIWRTLDR-GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLI 1038 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGi-dlIleAl~~ll~~-~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~i 1038 (1198)
+..++++.|++...|+. ..+++++....+. ++++|++|++++. + ++. ..++++++.+..+. ..+
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~~---~-------~l~-~~~~~v~~~~~~~~---~~l 283 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHR---A-------LLT-DLPDNARIAESVPL---NLF 283 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGGG---G-------GCT-TCCTTEEECCSCCG---GGT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcch---h-------hcc-cCCCCEEEeccCCH---HHH
Confidence 34566667998765443 5555554444333 7899999876321 1 111 12578999888765 345
Q ss_pred HHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC----ccccccccccccchhhhhccCCCCcEEEEcC----CCHHHH
Q 046057 1039 YAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT----GGLYDTVFDVDHDKERAQALDLEPNGFSFDG----ADIAGV 1110 (1198)
Q Consensus 1039 yA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t----GGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~----~D~~~L 1110 (1198)
++.||++|.. +.+.+++|||++|+|+|+... .+..+.+.+. ..|+++++ .+++.|
T Consensus 284 l~~ad~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-------------g~g~~~~~~~~~~~~~~l 346 (391)
T 3tsa_A 284 LRTCELVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-------------GAGICLPDEQAQSDHEQF 346 (391)
T ss_dssp GGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-------------TSEEECCSHHHHTCHHHH
T ss_pred HhhCCEEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc-------------CCEEecCcccccCCHHHH
Confidence 6999999954 455799999999999999544 3334444443 68999987 788888
Q ss_pred HHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHH
Q 046057 1111 DYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALD 1188 (1198)
Q Consensus 1111 a~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~ 1188 (1198)
+++|. .+.++++.+.++.+.+ +....+|+++++.
T Consensus 347 ~~ai~--------------------------------------------~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (391)
T 3tsa_A 347 TDSIA--------------------------------------------TVLGDTGFAAAAIKLSDEITAMPHPAALVRT 382 (391)
T ss_dssp HHHHH--------------------------------------------HHHTCTHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHH--------------------------------------------HHHcCHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 85555 4446777767676555 5567899999988
Q ss_pred HHHHHH
Q 046057 1189 YMELYR 1194 (1198)
Q Consensus 1189 yielY~ 1194 (1198)
++++..
T Consensus 383 i~~~~~ 388 (391)
T 3tsa_A 383 LENTAA 388 (391)
T ss_dssp HHHC--
T ss_pred HHHHHh
Confidence 877654
No 42
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=99.50 E-value=2.4e-14 Score=136.25 Aligned_cols=81 Identities=20% Similarity=0.249 Sum_probs=63.6
Q ss_pred CCCCCCCcEEEEEEeCCCCCCCCCCceEEEEEeC--CCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecCC
Q 046057 444 PSEFKGEDLVRLYYNKQSSSLAHAKELWIHGGYN--NWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGP 521 (1198)
Q Consensus 444 P~~~~aG~~V~v~YN~~~g~L~ga~~I~lh~G~N--~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~~ 521 (1198)
|.|+. |++|+|||+ .+++++|||+|++ .|+.... .+|.+.. ..+||++||++|. +..|+|||+||.
T Consensus 4 ~~p~~-g~~vTvyY~------sg~~~~ylHy~~~~g~Wt~vpg--v~M~~~~--~~Gw~~~TI~~~~-~~~l~~~F~dG~ 71 (102)
T 2c3v_A 4 MASGD-ATDITIYYK------TGWTHPHIHYSLNQGAWTTLPG--VPLTKSE--XEGXVKVTIEAEE-GSQLRAAFNNGS 71 (102)
T ss_dssp ----C-CCSEEEEEE------CCCSSCEEEEEETTCCBCCTTC--EECEECS--STTEEEEEECCCT-TCEEEEEEECSS
T ss_pred CCCCC-CCEEEEEEc------CCCCcEEEEEeCCCCCcccCCC--cCccccc--cCCceEEEEecCC-CceEEEEEeCCC
Confidence 55555 999999999 5799999999996 5996663 3443321 1348899999996 689999999997
Q ss_pred CCCCccccCCCCcceEEEe
Q 046057 522 PGKAIVYDNNSRQDFHAIV 540 (1198)
Q Consensus 522 ~~~~~~wDNN~g~dyh~~V 540 (1198)
++||||+|+||++..
T Consensus 72 ----~~WDNN~g~Ny~~~~ 86 (102)
T 2c3v_A 72 ----GQWDNNQGRDYDFSS 86 (102)
T ss_dssp ----SCEECGGGTCEEEES
T ss_pred ----cccccCCCcceEECC
Confidence 899999999999965
No 43
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.49 E-value=3.6e-12 Score=144.30 Aligned_cols=160 Identities=13% Similarity=0.018 Sum_probs=106.0
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEE-EecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVL-LGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVI-vGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
...++++.|++...+ .+.+..++..+...++++++ +|.+++. + .+. ..++++++.+..+.. .++
T Consensus 231 ~~~v~v~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~-------~~~-~~~~~v~~~~~~~~~---~ll 295 (402)
T 3ia7_A 231 APVLLVSLGNQFNEH-PEFFRACAQAFADTPWHVVMAIGGFLDP---A-------VLG-PLPPNVEAHQWIPFH---SVL 295 (402)
T ss_dssp CCEEEEECCSCSSCC-HHHHHHHHHHHTTSSCEEEEECCTTSCG---G-------GGC-SCCTTEEEESCCCHH---HHH
T ss_pred CCEEEEECCCCCcch-HHHHHHHHHHHhcCCcEEEEEeCCcCCh---h-------hhC-CCCCcEEEecCCCHH---HHH
Confidence 345677788887554 23333334333334577766 5654321 1 111 125789998877763 889
Q ss_pred HHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC-c----cccccccccccchhhhhccCCCCcEEEEcCC--CHHHHHH
Q 046057 1040 AGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT-G----GLYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVDY 1112 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t-G----Gl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La~ 1112 (1198)
+.||++|..+- ..+++|||++|+|+|+... . +..+.+.+. ..|..+... +++.|++
T Consensus 296 ~~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-------------g~g~~~~~~~~~~~~l~~ 358 (402)
T 3ia7_A 296 AHARACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-------------GLGSVLRPDQLEPASIRE 358 (402)
T ss_dssp TTEEEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-------------TSEEECCGGGCSHHHHHH
T ss_pred hhCCEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-------------CCEEEccCCCCCHHHHHH
Confidence 99999997753 3788999999999997543 2 333333332 679988765 7888885
Q ss_pred HHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHHHH
Q 046057 1113 ALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALDYM 1190 (1198)
Q Consensus 1113 AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~yi 1190 (1198)
+|. .+.++++.+.++.+.+ +....+++++++.++
T Consensus 359 ~~~--------------------------------------------~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 394 (402)
T 3ia7_A 359 AVE--------------------------------------------RLAADSAVRERVRRMQRDILSSGGPARAADEVE 394 (402)
T ss_dssp HHH--------------------------------------------HHHHCHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHH--------------------------------------------HHHcCHHHHHHHHHHHHHHhhCChHHHHHHHHH
Confidence 555 4446677666665554 556789999999999
Q ss_pred HHHHHH
Q 046057 1191 ELYRAA 1196 (1198)
Q Consensus 1191 elY~~a 1196 (1198)
+++...
T Consensus 395 ~~~~~~ 400 (402)
T 3ia7_A 395 AYLGRV 400 (402)
T ss_dssp HHHHHH
T ss_pred HHHhhc
Confidence 988764
No 44
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.43 E-value=1.7e-11 Score=140.18 Aligned_cols=159 Identities=14% Similarity=0.018 Sum_probs=103.0
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEE-EecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVL-LGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVI-vGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
...++++.|++..... +.+..++..+.+.++++|+ +|.+++.. ++. ..++++++.+..+.. .++
T Consensus 247 ~~~v~v~~Gs~~~~~~-~~~~~~~~al~~~~~~~v~~~g~~~~~~----------~l~-~~~~~v~~~~~~~~~---~ll 311 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRP-GFFRDCARAFDGQPWHVVMTLGGQVDPA----------ALG-DLPPNVEAHRWVPHV---KVL 311 (415)
T ss_dssp CCEEEEECTTTSCCCH-HHHHHHHHHHTTSSCEEEEECTTTSCGG----------GGC-CCCTTEEEESCCCHH---HHH
T ss_pred CCEEEEECCCCCCChH-HHHHHHHHHHhcCCcEEEEEeCCCCChH----------Hhc-CCCCcEEEEecCCHH---HHH
Confidence 3456777788754432 3333333333334588887 56543321 111 125789998877753 789
Q ss_pred HHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCc----cccccccccccchhhhhccCCCCcEEEEcCC--CHHHHHHH
Q 046057 1040 AGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTG----GLYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVDYA 1113 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tG----Gl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La~A 1113 (1198)
+.||++|..+- ..+++|||++|+|+|+-... ...+.+.+. ..|..+... +++.|+++
T Consensus 312 ~~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-------------g~g~~~~~~~~~~~~l~~~ 374 (415)
T 3rsc_A 312 EQATVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-------------GLGAVLPGEKADGDTLLAA 374 (415)
T ss_dssp HHEEEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-------------TCEEECCGGGCCHHHHHHH
T ss_pred hhCCEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-------------CCEEEcccCCCCHHHHHHH
Confidence 99999997652 37899999999999995432 223333332 678888765 78888855
Q ss_pred HhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHHHHH
Q 046057 1114 LNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALDYME 1191 (1198)
Q Consensus 1114 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~yie 1191 (1198)
|. .+.++++.+.++.+.+ +....+++++++.+++
T Consensus 375 i~--------------------------------------------~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 410 (415)
T 3rsc_A 375 VG--------------------------------------------AVAADPALLARVEAMRGHVRRAGGAARAADAVEA 410 (415)
T ss_dssp HH--------------------------------------------HHHTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HH--------------------------------------------HHHcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 54 4456777766665544 5567889999998888
Q ss_pred HHHH
Q 046057 1192 LYRA 1195 (1198)
Q Consensus 1192 lY~~ 1195 (1198)
++..
T Consensus 411 ~~~~ 414 (415)
T 3rsc_A 411 YLAR 414 (415)
T ss_dssp HHHH
T ss_pred Hhhc
Confidence 8765
No 45
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.41 E-value=6.2e-11 Score=134.38 Aligned_cols=119 Identities=8% Similarity=0.076 Sum_probs=83.9
Q ss_pred CcEEEEEecCCCc-------cCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHH
Q 046057 962 LPLVGIITRLTHQ-------KGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPL 1034 (1198)
Q Consensus 962 ~plIg~VGRL~~q-------KGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~ 1034 (1198)
..+++++|++... +.+..+++|+..+ +++++++++++ ..+.+. .+ +++|.+ +..+.
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~---~~~~l~----~~----~~~v~~-~~~~~-- 273 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPDT---VAEALR----AE----VPQARV-GWTPL-- 273 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCHH---HHHHHH----HH----CTTSEE-ECCCH--
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCCC---CHHhhC----CC----CCceEE-cCCCH--
Confidence 4578889999875 5677788887654 78888875532 112222 12 467888 77753
Q ss_pred HHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcc----ccccccccccchhhhhccCCCCcEEEEcCC--CHH
Q 046057 1035 SHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGG----LYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIA 1108 (1198)
Q Consensus 1035 l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGG----l~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~ 1108 (1198)
..+|+.||++|..+ .+.+++|||++|+|+|+...++ ..+.+.+. ..|+.++.. +++
T Consensus 274 -~~~l~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~-------------g~g~~~~~~~~~~~ 335 (384)
T 2p6p_A 274 -DVVAPTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY-------------GAAIALLPGEDSTE 335 (384)
T ss_dssp -HHHGGGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-------------TSEEECCTTCCCHH
T ss_pred -HHHHhhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC-------------CCeEecCcCCCCHH
Confidence 56789999999863 3469999999999999987743 34444433 579988754 688
Q ss_pred HHHHHHh
Q 046057 1109 GVDYALN 1115 (1198)
Q Consensus 1109 ~La~AL~ 1115 (1198)
+|+++|.
T Consensus 336 ~l~~~i~ 342 (384)
T 2p6p_A 336 AIADSCQ 342 (384)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8886555
No 46
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=99.41 E-value=3.4e-13 Score=128.84 Aligned_cols=78 Identities=21% Similarity=0.357 Sum_probs=63.9
Q ss_pred CCcEEEEEEeCCCCCCCCCCceEEEEEeC--CCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecCCCCCCc
Q 046057 449 GEDLVRLYYNKQSSSLAHAKELWIHGGYN--NWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAI 526 (1198)
Q Consensus 449 aG~~V~v~YN~~~g~L~ga~~I~lh~G~N--~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~~~~~~~ 526 (1198)
+|++|||||+ +++++||||+|+. +|+.... .+|.+..- .| |+.+||+||. +..|+|||+||. +
T Consensus 3 ~g~~vtiyY~------~g~~~vylHyg~~~g~Wt~~~~--v~M~~~~~-~g-w~~~TI~l~~-g~~~~~~F~dG~----~ 67 (104)
T 2laa_A 3 TGNKVTIYYK------KGFNSPYIHYRPAGGSWTAAPG--VKMQDAEI-SG-YAKITVDIGS-ASQLEAAFNDGN----N 67 (104)
T ss_dssp CCCEEEEEEE------CSSSSCEEEEEETTSCCCSSSC--EECEEETT-TT-EEEEEEECTT-CSCEEEEEECSS----S
T ss_pred CCCEEEEEEc------CCCCcEEEEEcCCCCCCCcCCc--cccccccC-CC-eEEEEEECCC-CCEEEEEEeCCC----C
Confidence 6999999999 4799999999994 8996653 34444331 23 4579999997 689999999997 8
Q ss_pred cccCCCCcceEEEec
Q 046057 527 VYDNNSRQDFHAIVP 541 (1198)
Q Consensus 527 ~wDNN~g~dyh~~V~ 541 (1198)
+||||+|+||++++.
T Consensus 68 ~WDNn~g~Nyt~~~g 82 (104)
T 2laa_A 68 NWDSNNTKNYSFSTG 82 (104)
T ss_dssp CEESTTTSCEEECSE
T ss_pred cCcCCCCccEEecCC
Confidence 999999999999874
No 47
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=99.40 E-value=3.8e-13 Score=128.51 Aligned_cols=78 Identities=13% Similarity=0.305 Sum_probs=67.9
Q ss_pred CCCeEEEEEcccCCCCCCCCcEEEEeecC--CccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcCCcccccCC
Q 046057 274 PDQDIEVFLNRSLSTLKNEPDVLIMGAFN--DWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQNIYENND 351 (1198)
Q Consensus 274 aG~~v~v~yN~~l~~L~~~~~v~ih~GfN--~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg~~~wDNN~ 351 (1198)
+|++|+|||| ++.+.|+||+||. +|..++. .+|.++.. ..|+.++|+||. +..|+|||+||+.+||||+
T Consensus 3 ~g~~vtiyY~------~g~~~vylHyg~~~g~Wt~~~~-v~M~~~~~-~gw~~~TI~l~~-g~~~~~~F~dG~~~WDNn~ 73 (104)
T 2laa_A 3 TGNKVTIYYK------KGFNSPYIHYRPAGGSWTAAPG-VKMQDAEI-SGYAKITVDIGS-ASQLEAAFNDGNNNWDSNN 73 (104)
T ss_dssp CCCEEEEEEE------CSSSSCEEEEEETTSCCCSSSC-EECEEETT-TTEEEEEEECTT-CSCEEEEEECSSSCEESTT
T ss_pred CCCEEEEEEc------CCCCcEEEEEcCCCCCCCcCCc-cccccccC-CCeEEEEEECCC-CCEEEEEEeCCCCcCcCCC
Confidence 6999999999 4789999999994 8998888 67776653 346679999986 6999999999999999999
Q ss_pred CCceEEEEc
Q 046057 352 QKDFCIAVE 360 (1198)
Q Consensus 352 g~d~~~~V~ 360 (1198)
|+||++++.
T Consensus 74 g~Nyt~~~g 82 (104)
T 2laa_A 74 TKNYSFSTG 82 (104)
T ss_dssp TSCEEECSE
T ss_pred CccEEecCC
Confidence 999999875
No 48
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.36 E-value=1.9e-12 Score=149.84 Aligned_cols=247 Identities=11% Similarity=-0.015 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchh-----hhHHHHHH-hccCEEE
Q 046057 815 AFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFG-----THHIGKAM-TYADKAT 888 (1198)
Q Consensus 815 ~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~-----~~li~~~~-~~AD~Vi 888 (1198)
+.....+.+++++ .+||+|++|+-.+...+.+..... ++|++....+.... ....+..+ ..+|.++
T Consensus 80 ~~~~~~l~~~l~~--~kPD~Vlv~gd~~~~~aalaA~~~------~IPv~h~eaglrs~~~~~pee~nR~~~~~~a~~~~ 151 (385)
T 4hwg_A 80 GLVIEKVDEVLEK--EKPDAVLFYGDTNSCLSAIAAKRR------KIPIFHMEAGNRCFDQRVPEEINRKIIDHISDVNI 151 (385)
T ss_dssp HHHHHHHHHHHHH--HCCSEEEEESCSGGGGGHHHHHHT------TCCEEEESCCCCCSCTTSTHHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHHHHh--cCCcEEEEECCchHHHHHHHHHHh------CCCEEEEeCCCccccccCcHHHHHHHHHhhhceee
Confidence 3344555666665 489999999743333333333322 89976555443211 12344443 4689999
Q ss_pred EeCHHHHHHHhCCCCCCCCCCcEEEEeCC-CCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCCCCCcEEEE
Q 046057 889 TVSHTYSKEVAGDPAIAPHLHKFYGILNG-IDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGI 967 (1198)
Q Consensus 889 tVS~~~a~el~~~~~l~~~~~K~~vI~NG-ID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~ 967 (1198)
+.++..++.+...+ .+..+++++.|. +|.-.+ ......+..+++++|++. +..+++.
T Consensus 152 ~~te~~~~~l~~~G---~~~~~I~vtGnp~~D~~~~------------------~~~~~~~~~~~~~lgl~~-~~~iLvt 209 (385)
T 4hwg_A 152 TLTEHARRYLIAEG---LPAELTFKSGSHMPEVLDR------------------FMPKILKSDILDKLSLTP-KQYFLIS 209 (385)
T ss_dssp ESSHHHHHHHHHTT---CCGGGEEECCCSHHHHHHH------------------HHHHHHHCCHHHHTTCCT-TSEEEEE
T ss_pred cCCHHHHHHHHHcC---CCcCcEEEECCchHHHHHH------------------hhhhcchhHHHHHcCCCc-CCEEEEE
Confidence 99999999887544 345678887763 342110 011234556888999973 4456666
Q ss_pred EecCC---CccCHHHHHHHHHHhhcC-CcEEEEEecCCChhhHHHHHHHHHHh-C-CCCCCcEEEEccCChHHHHHHHHH
Q 046057 968 ITRLT---HQKGIHLIKHAIWRTLDR-GGQVVLLGSAPDPRIQNDFVNLANEL-H-SSHADRARLCLTYDEPLSHLIYAG 1041 (1198)
Q Consensus 968 VGRL~---~qKGidlIleAl~~ll~~-~~qLVIvGsgpdp~i~~~L~~la~eL-g-l~~~drV~f~g~~d~~~l~~iyA~ 1041 (1198)
.+|.. ..|++..|++|+..+.++ ++++|+... +. +++.++++ + +...++|.++..++...+..+|+.
T Consensus 210 ~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~---p~----~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~ 282 (385)
T 4hwg_A 210 SHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH---PR----TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMN 282 (385)
T ss_dssp ECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC---HH----HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHH
T ss_pred eCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC---hH----HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHh
Confidence 77753 347899999999988653 677777543 22 34444444 3 322368999888887778899999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC-ccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcc
Q 046057 1042 ADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT-GGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIH 1118 (1198)
Q Consensus 1042 ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t-GGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~ 1118 (1198)
||+++.+| |.+++||+++|+|+|+... .+.+|.+.. .+++++. .|++.|.+++..|.
T Consensus 283 adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~--------------G~~~lv~-~d~~~i~~ai~~ll 340 (385)
T 4hwg_A 283 AFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDA--------------GTLIMSG-FKAERVLQAVKTIT 340 (385)
T ss_dssp CSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHH--------------TCCEECC-SSHHHHHHHHHHHH
T ss_pred CcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhc--------------CceEEcC-CCHHHHHHHHHHHH
Confidence 99999887 5578999999999999543 335666544 3566664 48999999888443
No 49
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.20 E-value=5.3e-10 Score=129.97 Aligned_cols=155 Identities=11% Similarity=-0.039 Sum_probs=105.8
Q ss_pred CcEEEEEecCCC-----ccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 962 LPLVGIITRLTH-----QKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 962 ~plIg~VGRL~~-----qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
..++++.|++.. .|.+..+++|+..+ ++++|+.+++++. .++. ..+++|++.+.++. .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~----------~~l~-~~~~~v~~~~~~~~---~ 330 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQL----------EGVA-NIPDNVRTVGFVPM---H 330 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTTT----------SSCS-SCCSSEEECCSCCH---H
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcch----------hhhc-cCCCCEEEecCCCH---H
Confidence 447788899875 48888888988665 7888887665321 1121 12578999888775 3
Q ss_pred HHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcc----ccccccccccchhhhhccCCCCcEEEEcCC--CHHHH
Q 046057 1037 LIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGG----LYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGV 1110 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGG----l~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~L 1110 (1198)
.+|+.||++|.. +.+.+++|||++|+|+|+...++ ..+.+.+. ..|+.++.. +++.|
T Consensus 331 ~ll~~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-------------g~g~~~~~~~~~~~~l 393 (441)
T 2yjn_A 331 ALLPTCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-------------GAGIALPVPELTPDQL 393 (441)
T ss_dssp HHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-------------TSEEECCTTTCCHHHH
T ss_pred HHHhhCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-------------CCEEEcccccCCHHHH
Confidence 568999999974 44579999999999999987743 23333332 679988765 77888
Q ss_pred HHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH--HHhcCChHHHHHH
Q 046057 1111 DYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV--MEQDWSWNRPALD 1188 (1198)
Q Consensus 1111 a~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a--m~qdfSW~~~A~~ 1188 (1198)
+++|. .+.++++.+.++.+.+ +....+++++++.
T Consensus 394 ~~~i~--------------------------------------------~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (441)
T 2yjn_A 394 RESVK--------------------------------------------RVLDDPAHRAGAARMRDDMLAEPSPAEVVGI 429 (441)
T ss_dssp HHHHH--------------------------------------------HHHHCHHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHH--------------------------------------------HHhcCHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 85555 4446677666665554 4567888999888
Q ss_pred HHHHHH
Q 046057 1189 YMELYR 1194 (1198)
Q Consensus 1189 yielY~ 1194 (1198)
+++++.
T Consensus 430 i~~~~~ 435 (441)
T 2yjn_A 430 CEELAA 435 (441)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887765
No 50
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.12 E-value=4.1e-09 Score=121.52 Aligned_cols=124 Identities=15% Similarity=0.136 Sum_probs=82.3
Q ss_pred CCcEEEEEecCC-CccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 961 DLPLVGIITRLT-HQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 961 d~plIg~VGRL~-~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
..+++++.|++. ..+.+..+++|+..+ ++++|+.++.++.. .+++ ++++.+.+..+. ..++
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~~~----------~~~~--~~~v~~~~~~~~---~~ll 282 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAGLG----------RIDE--GDDCLVVGEVNH---QVLF 282 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTTCC----------CSSC--CTTEEEESSCCH---HHHG
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcccc----------cccC--CCCEEEecCCCH---HHHH
Confidence 456778889987 666778888888765 67887765542211 1122 578999887765 5678
Q ss_pred HHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCC--CHHHHHHHHh
Q 046057 1040 AGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVDYALN 1115 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La~AL~ 1115 (1198)
..||++|..+ -..++.|||++|+|+|+-..++-..... .+.+.. ..|+.++.. +++.|.++|.
T Consensus 283 ~~~d~~v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na------~~~~~~---G~g~~l~~~~~~~~~l~~ai~ 347 (404)
T 3h4t_A 283 GRVAAVVHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYA------GRVADL---GVGVAHDGPTPTVESLSAALA 347 (404)
T ss_dssp GGSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHH------HHHHHH---TSEEECSSSSCCHHHHHHHHH
T ss_pred hhCcEEEECC----cHHHHHHHHHcCCCEEEcCCcccHHHHH------HHHHHC---CCEeccCcCCCCHHHHHHHHH
Confidence 9999999654 3379999999999999975543211110 011111 568887643 6788886665
No 51
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.00 E-value=3.6e-08 Score=111.75 Aligned_cols=97 Identities=16% Similarity=0.071 Sum_probs=64.6
Q ss_pred CCcEEEEEecCCCcc-CHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 961 DLPLVGIITRLTHQK-GIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 961 d~plIg~VGRL~~qK-GidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
..+++++.|++...+ +...+..++..+.+.+.++|+.+.+.+.. ... ..++++.+....+. ..++
T Consensus 237 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~----------~~~-~~~~~v~~~~~~p~---~~lL 302 (400)
T 4amg_A 237 RRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA----------LLG-ELPANVRVVEWIPL---GALL 302 (400)
T ss_dssp CCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC----------CCC-CCCTTEEEECCCCH---HHHH
T ss_pred CcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc----------ccc-cCCCCEEEEeecCH---HHHh
Confidence 445666778876544 44555566666666688888876553321 111 23689999888875 4678
Q ss_pred HHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcc
Q 046057 1040 AGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGG 1075 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGG 1075 (1198)
+.+|++|.- +-..+++|||++|+|+|+-...+
T Consensus 303 ~~~~~~v~h----~G~~s~~Eal~~GvP~v~~P~~~ 334 (400)
T 4amg_A 303 ETCDAIIHH----GGSGTLLTALAAGVPQCVIPHGS 334 (400)
T ss_dssp TTCSEEEEC----CCHHHHHHHHHHTCCEEECCC--
T ss_pred hhhhheecc----CCccHHHHHHHhCCCEEEecCcc
Confidence 999998843 44579999999999999976543
No 52
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=98.99 E-value=1.3e-07 Score=117.17 Aligned_cols=346 Identities=16% Similarity=0.144 Sum_probs=209.4
Q ss_pred CceEEEECCCChhHHHHHHHHhhhh-cCCC--------CCeEEEEecCCchh------hh--------------------
Q 046057 831 HPDIIHCHDWSSAPVAWLFKDHYVH-YGLS--------KARIVFTIHNLEFG------TH-------------------- 875 (1198)
Q Consensus 831 ~PDVIH~Hdw~ta~va~llk~~y~~-~gl~--------~ipvV~tIHn~~~~------~~-------------------- 875 (1198)
++.+||++|-+++++...+-..+.. .++. ..-+++|.|++-.. ..
T Consensus 359 ~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ein~~f 438 (879)
T 1ygp_A 359 DQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDINWFF 438 (879)
T ss_dssp HHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHHHHHH
Confidence 5789999999988776555444321 1221 24689999998541 00
Q ss_pred -------------------------------HHHHHHhccCEEEEeCHHHHHHHhCCC---CCCCCCC-cEEEEeCCCCC
Q 046057 876 -------------------------------HIGKAMTYADKATTVSHTYSKEVAGDP---AIAPHLH-KFYGILNGIDQ 920 (1198)
Q Consensus 876 -------------------------------li~~~~~~AD~VitVS~~~a~el~~~~---~l~~~~~-K~~vI~NGID~ 920 (1198)
+-..++..|..|-.||.-+.+.+...- ++..-+. ||.-|-|||.+
T Consensus 439 ~~~~~~~~~~d~~~~~~l~ii~~~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~TNGVt~ 518 (879)
T 1ygp_A 439 LEDVAKKFPKDVDLLSRISIIEENSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVTNGITP 518 (879)
T ss_dssp HHHHHHHSTTCTHHHHHHCSEECCSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHHHHHHHCGGGEEECCCCBCH
T ss_pred HHHHHHHcCCCHHHHHhcceeccCCCcceeehHHHHHHhcCceeEehHHHHHHHHHHHhHHHHHhCCCCcccCcCCCcCC
Confidence 001233446667778877776663210 1111133 89999999988
Q ss_pred CCCC----CCC------------CCCCCc--------cc-cc----chhhhchHHHHHHH----HHHh-CCC-C-----C
Q 046057 921 DMWD----PFN------------DKFIPV--------SY-TS----ENLVEGKRAAKEAL----QQKV-GLR-K-----S 960 (1198)
Q Consensus 921 d~~~----P~~------------D~~Lp~--------~y-s~----~~~~~gk~~~k~aL----rq~l-GL~-~-----~ 960 (1198)
..|- |.- +.++-. .| +. +.+..-|...|..| ++++ |.. . +
T Consensus 519 rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~~~~~p 598 (879)
T 1ygp_A 519 RRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIINREYLD 598 (879)
T ss_dssp HHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSCSTTGG
T ss_pred chhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecCCCCCC
Confidence 7773 320 111100 00 11 22334455555554 4456 655 4 5
Q ss_pred CCcEEEEEecCCCccCHHH-HHHHHHHhh----c--------------CCcEEEEEecC-CChhhHHHHHHHHHHhC---
Q 046057 961 DLPLVGIITRLTHQKGIHL-IKHAIWRTL----D--------------RGGQVVLLGSA-PDPRIQNDFVNLANELH--- 1017 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidl-IleAl~~ll----~--------------~~~qLVIvGsg-pdp~i~~~L~~la~eLg--- 1017 (1198)
+...++++-|+...|.+.+ +++.+.++. . ...+||+.|.+ |....-..+.+++.++.
T Consensus 599 ~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~i 678 (879)
T 1ygp_A 599 DTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIV 678 (879)
T ss_dssp GCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHh
Confidence 6789999999999999999 788765542 2 36788888876 22223334444443332
Q ss_pred -CC--CCC--cEEEEccCChHHHHHHHHHccEEEEcCC--CCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhh
Q 046057 1018 -SS--HAD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERA 1090 (1198)
Q Consensus 1018 -l~--~~d--rV~f~g~~d~~~l~~iyA~ADi~LvPS~--~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~ 1090 (1198)
.+ ..+ +|.|+..|+-.+...++.+|||....|. .|.+|..-|-+|..|.+.|++--|...|+....
T Consensus 679 N~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~v------- 751 (879)
T 1ygp_A 679 NNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREI------- 751 (879)
T ss_dssp TTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHH-------
T ss_pred ccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHc-------
Confidence 11 124 7999999999999999999999999998 699999999999999999999999999998663
Q ss_pred hccCCCCcEEEEcCC-----------------CHHHHHHHHhhcccccccccc---cccccccccCCCCccccccccccc
Q 046057 1091 QALDLEPNGFSFDGA-----------------DIAGVDYALNSIHVSSFHTTS---RLYIYEDLEGQPLMIPFKQKQSSM 1150 (1198)
Q Consensus 1091 ~~~~~~~nG~lf~~~-----------------D~~~La~AL~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 1150 (1198)
+.+|+|+|-.. ....+.++|.+|.+-.|..+. ---+|..+. .+-+.-.++.
T Consensus 752 ----G~eN~fiFG~~~~ev~~~~~~~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~L~-----~~~D~y~vl~ 822 (879)
T 1ygp_A 752 ----GEDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIK-----YHGDYYLVSD 822 (879)
T ss_dssp ----CGGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC--CCCTTSTTTTHHHHHHHH-----HSTTTTCHHH
T ss_pred ----CcccEEEccCCHHHHHHHHHhCchhccCCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHh-----cCCCeEEEec
Confidence 22799999642 123455556555554443211 000111110 0001112333
Q ss_pred chhHH----HHHHHHhcCHH-HHHHHHHHH--HHhcCChHHHHHHHHHH
Q 046057 1151 TYDSF----RAISAYYDGRE-WLNSLCKTV--MEQDWSWNRPALDYMEL 1192 (1198)
Q Consensus 1151 ~~~~~----rAI~~l~~~~e-~~~~L~~~a--m~qdfSW~~~A~~yiel 1192 (1198)
-|.|| ..++..|.|++ .|.+++... ..-.||-+++..+|.+-
T Consensus 823 Df~sY~~~q~~v~~~Y~d~~~~W~~~~i~NiA~~G~FSSDRtI~eYa~~ 871 (879)
T 1ygp_A 823 DFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEEYSDT 871 (879)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHGGGBHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCccCchHHHHHHHHH
Confidence 33444 22233345555 555554444 34589999999999874
No 53
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=98.99 E-value=1.9e-07 Score=107.53 Aligned_cols=123 Identities=12% Similarity=0.013 Sum_probs=79.1
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEE-EecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVL-LGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVI-vGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
...++++.|++. .+..+.+..++..+...++++++ +|.+.+.. . +. ..++++.+.+..++. .+|
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~---~-------~~-~~~~~v~~~~~~~~~---~~l 319 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPA---D-------LG-EVPPNVEVHQWVPQL---DIL 319 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCGG---G-------GC-SCCTTEEEESSCCHH---HHH
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCChH---H-------hc-cCCCCeEEecCCCHH---HHH
Confidence 345677788887 44444444444444445788854 67653321 1 11 125789998887763 689
Q ss_pred HHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcc----ccccccccccchhhhhccCCCCcEEEEcCC--CHHHHHHH
Q 046057 1040 AGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGG----LYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVDYA 1113 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGG----l~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La~A 1113 (1198)
+.||++|..+ -..+++|||++|+|+|+....+ ..+.+.+ ...|+.++.. +++.|+++
T Consensus 320 ~~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-------------~g~g~~~~~~~~~~~~l~~~ 382 (424)
T 2iya_A 320 TKASAFITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-------------LGLGRHIPRDQVTAEKLREA 382 (424)
T ss_dssp TTCSEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-------------TTSEEECCGGGCCHHHHHHH
T ss_pred hhCCEEEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHH-------------CCCEEEcCcCCCCHHHHHHH
Confidence 9999988642 2379999999999999987643 1112222 1578888654 77888855
Q ss_pred Hh
Q 046057 1114 LN 1115 (1198)
Q Consensus 1114 L~ 1115 (1198)
|.
T Consensus 383 i~ 384 (424)
T 2iya_A 383 VL 384 (424)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 54
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.87 E-value=1.9e-07 Score=107.58 Aligned_cols=119 Identities=18% Similarity=0.170 Sum_probs=80.1
Q ss_pred CCcEEEEEecC-CCccCHHHHHHHHHHhhcCCcEEEEE-ecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHH
Q 046057 961 DLPLVGIITRL-THQKGIHLIKHAIWRTLDRGGQVVLL-GSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLI 1038 (1198)
Q Consensus 961 d~plIg~VGRL-~~qKGidlIleAl~~ll~~~~qLVIv-Gsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~i 1038 (1198)
...++++.|++ ...+.++.+++|+..+ +.+++++ |.+. .. . .. .++++.+.+..+.. .+
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~-~~-------~---~~--~~~~v~~~~~~~~~---~~ 298 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWAD-LV-------L---PD--DGADCFAIGEVNHQ---VL 298 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTT-CC-------C---SS--CGGGEEECSSCCHH---HH
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCc-cc-------c---cC--CCCCEEEeCcCChH---HH
Confidence 35678888999 5888888899998776 4667665 6542 11 0 11 25789998888763 46
Q ss_pred HHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcc----ccccccccccchhhhhccCCCCcEEEEcCC--CHHHHHH
Q 046057 1039 YAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGG----LYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVDY 1112 (1198)
Q Consensus 1039 yA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGG----l~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La~ 1112 (1198)
++.||++|..+ -..+++|||++|+|+|+....+ ..+.+.+. ..|+.++.. +++.|++
T Consensus 299 l~~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-------------g~g~~~~~~~~~~~~l~~ 361 (415)
T 1iir_A 299 FGRVAAVIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-------------GVGVAHDGPIPTFDSLSA 361 (415)
T ss_dssp GGGSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-------------TSEEECSSSSCCHHHHHH
T ss_pred HhhCCEEEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC-------------CCcccCCcCCCCHHHHHH
Confidence 79999999753 2369999999999999987643 12222221 578888653 6777774
Q ss_pred HHh
Q 046057 1113 ALN 1115 (1198)
Q Consensus 1113 AL~ 1115 (1198)
+|.
T Consensus 362 ~i~ 364 (415)
T 1iir_A 362 ALA 364 (415)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 55
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.71 E-value=3.7e-08 Score=119.84 Aligned_cols=213 Identities=11% Similarity=0.014 Sum_probs=134.0
Q ss_pred HHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEecCCchhhhHHHHHHhccCEEEEeCHHHHHHH
Q 046057 819 HAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEV 898 (1198)
Q Consensus 819 ~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tIHn~~~~~~li~~~~~~AD~VitVS~~~a~el 898 (1198)
..+.+.++.. ++||+.-=+.++.....++... .-+||-++.-+.... .++...|.+++-.-.
T Consensus 339 ~~ia~~Ir~d--~IDILVdL~g~t~~~~i~~aa~------RpAPVQvs~lGyp~T-----TGl~~iDY~i~D~~~----- 400 (631)
T 3q3e_A 339 EFIRSVCESN--GAAIFYMPSIGMDMTTIFASNT------RLAPIQAIALGHPAT-----THSDFIEYVIVEDDY----- 400 (631)
T ss_dssp HHHHHHHHHH--TCSEEEESCCSSSHHHHHHTTS------CCSSEEEEECSSCSC-----CCCTTCCEEEEEGGG-----
T ss_pred HHHHHHHHhc--CCCEEEECCCCCCchhHHHHhC------CCchheEeccCCCcc-----cCcccCCEEEeCCCC-----
Confidence 3455666653 7899887554444443333211 246887777654322 145567888774311
Q ss_pred hCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCC-CCCcEEEEEecCCCccCH
Q 046057 899 AGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRK-SDLPLVGIITRLTHQKGI 977 (1198)
Q Consensus 899 ~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~-~d~plIg~VGRL~~qKGi 977 (1198)
. +.-..-..++.-+|+..= -|+|..+ .|. +..+|++. .+.++++++.++ .|..
T Consensus 401 ~--~~~~~ysEklirLP~~~~--~~~p~~~--~p~------------------r~~~~lp~~~G~v~Fg~fn~~--~Ki~ 454 (631)
T 3q3e_A 401 V--GSEECFSETLLRLPKDAL--PYVPSAL--APE------------------KVDYLLRENPEVVNIGIASTT--MKLN 454 (631)
T ss_dssp C--CCGGGCSSEEEEECTTSS--CCCCCTT--CCS------------------SCCCCCCSCCSEEEEEEEECS--TTCC
T ss_pred C--CcccCceeeEEECCCCcc--ccCCccc--CCc------------------cccccCCcCCCeEEEEECCcc--ccCC
Confidence 1 111223467887876321 1334221 110 23456663 236778888876 5999
Q ss_pred HHHHHHHHHhhc--CCcEEE--EEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCC
Q 046057 978 HLIKHAIWRTLD--RGGQVV--LLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEP 1053 (1198)
Q Consensus 978 dlIleAl~~ll~--~~~qLV--IvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~Ep 1053 (1198)
..+++++.++++ ++..++ ++|.++ .....+.+.+.++|+. +++.|.+..+.......|+.+||+|-|+.+.+
T Consensus 455 p~~l~~WarIL~~vP~s~L~l~~~g~~~--g~~~~~~~~~~~~GI~--~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~G 530 (631)
T 3q3e_A 455 PYFLEALKAIRDRAKVKVHFHFALGQSN--GITHPYVERFIKSYLG--DSATAHPHSPYHQYLRILHNCDMMVNPFPFGN 530 (631)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEEEESSCC--GGGHHHHHHHHHHHHG--GGEEEECCCCHHHHHHHHHTCSEEECCSSSCC
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCCCc--hhhHHHHHHHHHcCCC--ccEEEcCCCCHHHHHHHHhcCcEEEeCCcccC
Confidence 999999998885 354443 356432 2233343445567874 79999999988887889999999999998754
Q ss_pred CcHHHHHHHHhCCcEEEeCCccccccc
Q 046057 1054 CGLTQLVAMRYGSIPVVRKTGGLYDTV 1080 (1198)
Q Consensus 1054 fGLt~LEAMa~G~PvIvt~tGGl~E~V 1080 (1198)
|+|.+|||++|+|||+...+++..-+
T Consensus 531 -gtTtlEALwmGVPVVTl~G~~~asRv 556 (631)
T 3q3e_A 531 -TNGIIDMVTLGLVGVCKTGAEVHEHI 556 (631)
T ss_dssp -SHHHHHHHHTTCCEEEECCSSHHHHH
T ss_pred -ChHHHHHHHcCCCEEeccCCcHHHHh
Confidence 99999999999999997655554443
No 56
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.70 E-value=1.4e-06 Score=100.28 Aligned_cols=119 Identities=17% Similarity=0.140 Sum_probs=79.3
Q ss_pred CCcEEEEEecCC---CccCHHHHHHHHHHhhcCCcEEEEE-ecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 961 DLPLVGIITRLT---HQKGIHLIKHAIWRTLDRGGQVVLL-GSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 961 d~plIg~VGRL~---~qKGidlIleAl~~ll~~~~qLVIv-Gsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
+..++++.|++. ..+.+..+++|+..+ +.++|++ |.+ +.. . . ..++++.+.+..+. .
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~-~~~----~------~--~~~~~v~~~~~~~~---~ 297 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWT-ELV----L------P--DDRDDCFAIDEVNF---Q 297 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTT-TCC----C------S--CCCTTEEEESSCCH---H
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCc-ccc----c------c--CCCCCEEEeccCCh---H
Confidence 355778889985 456677777777665 5677775 654 211 0 1 23578999888774 5
Q ss_pred HHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcc----ccccccccccchhhhhccCCCCcEEEEcC--CCHHHH
Q 046057 1037 LIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGG----LYDTVFDVDHDKERAQALDLEPNGFSFDG--ADIAGV 1110 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGG----l~E~V~d~d~~~~~~~~~~~~~nG~lf~~--~D~~~L 1110 (1198)
.+++.||++|.- +-..+++|||++|+|+|+-...+ ..+.+.+. ..|+.++. .+++.|
T Consensus 298 ~ll~~~d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-------------g~g~~~~~~~~~~~~l 360 (416)
T 1rrv_A 298 ALFRRVAAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-------------GIGVAHDGPTPTFESL 360 (416)
T ss_dssp HHGGGSSEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH-------------TSEEECSSSCCCHHHH
T ss_pred HHhccCCEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC-------------CCccCCCCCCCCHHHH
Confidence 678999999963 33469999999999999976532 11122211 56888764 467777
Q ss_pred HHHHh
Q 046057 1111 DYALN 1115 (1198)
Q Consensus 1111 a~AL~ 1115 (1198)
+++|.
T Consensus 361 ~~~i~ 365 (416)
T 1rrv_A 361 SAALT 365 (416)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 74444
No 57
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.58 E-value=3.3e-07 Score=92.64 Aligned_cols=120 Identities=11% Similarity=-0.087 Sum_probs=85.5
Q ss_pred CCcEEEEEecCC---CccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHH
Q 046057 961 DLPLVGIITRLT---HQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHL 1037 (1198)
Q Consensus 961 d~plIg~VGRL~---~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~ 1037 (1198)
...+++++|++. +.|++..+++|+..+ +.+++++++++... .+ +++|++.+.++...+..
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~~------------~~--~~~v~~~~~~~~~~~l~ 83 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKPD------------TL--GLNTRLYKWIPQNDLLG 83 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCCT------------TC--CTTEEEESSCCHHHHHT
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCcc------------cC--CCcEEEecCCCHHHHhc
Confidence 356788899985 677888888888554 57888887654321 12 57899998887643211
Q ss_pred HHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcc----ccccccccccchhhhhccCCCCcEEEEcCC--CHHHHH
Q 046057 1038 IYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGG----LYDTVFDVDHDKERAQALDLEPNGFSFDGA--DIAGVD 1111 (1198)
Q Consensus 1038 iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGG----l~E~V~d~d~~~~~~~~~~~~~nG~lf~~~--D~~~La 1111 (1198)
++.||++|.. +.+.|++|||++|+|+|+....+ ..+.+.+. ..|+.++.. +++.|+
T Consensus 84 -~~~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-------------g~g~~~~~~~~~~~~l~ 145 (170)
T 2o6l_A 84 -HPKTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-------------GAAVRVDFNTMSSTDLL 145 (170)
T ss_dssp -STTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-------------TSEEECCTTTCCHHHHH
T ss_pred -CCCcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-------------CCeEEeccccCCHHHHH
Confidence 2999999975 45699999999999999987742 22333332 679999866 788888
Q ss_pred HHHh
Q 046057 1112 YALN 1115 (1198)
Q Consensus 1112 ~AL~ 1115 (1198)
++|.
T Consensus 146 ~~i~ 149 (170)
T 2o6l_A 146 NALK 149 (170)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6665
No 58
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.79 E-value=0.00049 Score=85.93 Aligned_cols=114 Identities=14% Similarity=-0.007 Sum_probs=89.4
Q ss_pred HHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhc--CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEcc
Q 046057 952 QQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLD--RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLT 1029 (1198)
Q Consensus 952 rq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~--~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~ 1029 (1198)
|..+||+ .+..++++..++. |=-..++++..++++ ++.+|+|+... ...+..+.+.+++.|+. ++|+.|.+.
T Consensus 514 R~~~gLp-~~~v~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~--~~~~~~l~~~~~~~gi~-~~r~~f~~~ 587 (723)
T 4gyw_A 514 RSQYGLP-EDAIVYCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFP--AVGEPNIQQYAQNMGLP-QNRIIFSPV 587 (723)
T ss_dssp GGGGTCC-TTSEEEECCSCGG--GCCHHHHHHHHHHHHHCSSEEEEEEETT--GGGHHHHHHHHHHTTCC-GGGEEEEEC
T ss_pred hhhcCCC-CCCEEEEeCCccc--cCCHHHHHHHHHHHHhCCCCeEEEEeCc--HHHHHHHHHHHHhcCCC-cCeEEECCC
Confidence 5678998 4666666666654 666666777766664 58889888764 23567888999999996 789999998
Q ss_pred CChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeC
Q 046057 1030 YDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRK 1072 (1198)
Q Consensus 1030 ~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~ 1072 (1198)
.+...--..|..+||+|=|--| +-|.|.+||+.+|+|||+-.
T Consensus 588 ~~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 588 APKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp CCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCC
T ss_pred CCHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEcc
Confidence 8877766789999999998766 56899999999999888754
No 59
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.69 E-value=1.8e-05 Score=80.94 Aligned_cols=80 Identities=18% Similarity=0.304 Sum_probs=60.4
Q ss_pred CCCCCCCceEEEEEeCCCCCCccceeeeccccCC--CCCeEEEEEEecCC---ceEEEEEEecCCCCCCccccCCCCcce
Q 046057 462 SSLAHAKELWIHGGYNNWKDGLSIVARLVSSERT--DGDWWYAKVSVPDQ---ALVLDWVFADGPPGKAIVYDNNSRQDF 536 (1198)
Q Consensus 462 g~L~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~--~g~ww~atV~VP~~---A~~ldFvFsD~~~~~~~~wDNN~g~dy 536 (1198)
-.|+....|++|+.+|+|+.-.++...-.+...+ +-|-|..+|.+|+. ...|.||+.... .++..||||+|+||
T Consensus 55 ~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v-~g~eyWDNN~G~NY 133 (156)
T 2eef_A 55 QNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYEC-NGQTYWDSNRGKNY 133 (156)
T ss_dssp CCSSSCCEEEEEEESSTTSSEEEEECEECCCSSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEE-TTEEEEESGGGSCC
T ss_pred eccCCCcEEEEEEeECCCcccEEEEEEEccccCCCCCceEEEEEEECCCccCCCcEEEEEEEEEe-CCCEEecCCCCeeE
Confidence 4788999999999999998665433333332211 23669999999873 357999999886 45679999999999
Q ss_pred EEEecC
Q 046057 537 HAIVPK 542 (1198)
Q Consensus 537 h~~V~~ 542 (1198)
.+....
T Consensus 134 ~v~~~~ 139 (156)
T 2eef_A 134 RIIRAE 139 (156)
T ss_dssp CEEETT
T ss_pred EEEEEE
Confidence 998863
No 60
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.61 E-value=3.9e-05 Score=78.45 Aligned_cols=75 Identities=20% Similarity=0.328 Sum_probs=57.3
Q ss_pred CCCCCCCCcEEEEeecCCccccccceecccccC----CCCeEEEEEEecCC---ceeEeEEEEc---CCcccccCCCCce
Q 046057 286 LSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHL----KGDWWSCQVHVPKE---AFKIDFVFFN---GQNIYENNDQKDF 355 (1198)
Q Consensus 286 l~~L~~~~~v~ih~GfN~W~~~~~~~~~~~t~~----~~dWw~~~v~VP~~---A~~lnFvF~d---g~~~wDNN~g~d~ 355 (1198)
...|+-+..|.++|.||+|+...+......... +.|=|..+|.+|+. ..+|.||+.. |...||||+|+||
T Consensus 54 V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~eyWDNN~G~NY 133 (156)
T 2eef_A 54 VQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQTYWDSNRGKNY 133 (156)
T ss_dssp ECCSSSCCEEEEEEESSTTSSEEEEECEECCCSSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTEEEEESGGGSCC
T ss_pred EeccCCCcEEEEEEeECCCcccEEEEEEEccccCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCCEEecCCCCeeE
Confidence 345788999999999999998776433332211 23448888888873 4689999985 4689999999999
Q ss_pred EEEEc
Q 046057 356 CIAVE 360 (1198)
Q Consensus 356 ~~~V~ 360 (1198)
.+...
T Consensus 134 ~v~~~ 138 (156)
T 2eef_A 134 RIIRA 138 (156)
T ss_dssp CEEET
T ss_pred EEEEE
Confidence 99988
No 61
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.22 E-value=0.069 Score=60.60 Aligned_cols=111 Identities=12% Similarity=0.079 Sum_probs=77.7
Q ss_pred HHHHHhCCCCCCCcEEEEEecCCCccCH--HHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEE
Q 046057 950 ALQQKVGLRKSDLPLVGIITRLTHQKGI--HLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLC 1027 (1198)
Q Consensus 950 aLrq~lGL~~~d~plIg~VGRL~~qKGi--dlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~ 1027 (1198)
++.+++|++.....+++..|.-.+.|.+ +.+.+.+..+.+++.++|++|+..+ .+..+++...++. ..+.+.
T Consensus 174 ~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e---~~~~~~i~~~~~~---~~~~l~ 247 (349)
T 3tov_A 174 EFYSSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMD---LEMVQPVVEQMET---KPIVAT 247 (349)
T ss_dssp HHHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTT---HHHHHHHHHTCSS---CCEECT
T ss_pred HHHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcch---HHHHHHHHHhccc---ccEEee
Confidence 4556678863233344555654566764 5788888887767899999987533 3445556554442 346677
Q ss_pred ccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1028 LTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1028 g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
+..+-.++..+++.||++|.+- .|..-| |.++|+|+|+-
T Consensus 248 g~~sl~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 248 GKFQLGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVAL 286 (349)
T ss_dssp TCCCHHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEE
T ss_pred CCCCHHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEE
Confidence 7788888999999999999772 366667 99999999984
No 62
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=97.22 E-value=0.00031 Score=67.48 Aligned_cols=74 Identities=19% Similarity=0.368 Sum_probs=52.9
Q ss_pred CCCCCCceEEEEE--eCCCCC-CccceeeeccccCCCC-CeEEEEEEecCCceEEEEEEecCCCCCCccccCCCCcceEE
Q 046057 463 SLAHAKELWIHGG--YNNWKD-GLSIVARLVSSERTDG-DWWYAKVSVPDQALVLDWVFADGPPGKAIVYDNNSRQDFHA 538 (1198)
Q Consensus 463 ~L~ga~~I~lh~G--~N~W~~-~~~~~~~l~~~~~~~g-~ww~atV~VP~~A~~ldFvFsD~~~~~~~~wDNN~g~dyh~ 538 (1198)
.|+-...|.+|+- +|+|+. -.+....-.+.....+ |-|..++.+|+ .+.||..-.. .++.-||||+|+||.+
T Consensus 29 NlafeK~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~---~~eFcIrY~v-~g~eyWDNN~g~NY~v 104 (106)
T 2djm_A 29 NIAYSKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKG---IKEFYIKYEV-SGKTYYDNNNSANYQV 104 (106)
T ss_dssp CSSSCEEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSS---EEEEEEEEEE-SSCEEEECSSSSCEEC
T ss_pred ecCcCcEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCC---CeEEEEEEEE-CCcEEEcCCCCeeEEE
Confidence 5667889999999 999997 5543333333332223 77999999996 3577776554 3567999999999987
Q ss_pred Ee
Q 046057 539 IV 540 (1198)
Q Consensus 539 ~V 540 (1198)
.|
T Consensus 105 ~~ 106 (106)
T 2djm_A 105 ST 106 (106)
T ss_dssp CC
T ss_pred eC
Confidence 54
No 63
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=96.95 E-value=0.12 Score=57.34 Aligned_cols=93 Identities=9% Similarity=0.000 Sum_probs=60.8
Q ss_pred cEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHc
Q 046057 963 PLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGA 1042 (1198)
Q Consensus 963 plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~A 1042 (1198)
.+++++|-.++..-...+++++. ...--.|+.|.+ .+ ..+.+++++.+ + .++.+.+..++ +..+|+.|
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~---~~~~i~vv~G~~-~~-~~~~l~~~~~~----~-~~v~v~~~~~~--m~~~m~~a 226 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELP---KTKIISIATSSS-NP-NLKKLQKFAKL----H-NNIRLFIDHEN--IAKLMNES 226 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSC---TTSCEEEEECTT-CT-THHHHHHHHHT----C-SSEEEEESCSC--HHHHHHTE
T ss_pred eEEEEECCCchhhHHHHHHHHhh---cCCCEEEEECCC-ch-HHHHHHHHHhh----C-CCEEEEeCHHH--HHHHHHHC
Confidence 35566676654432334444442 222234567776 32 34566666553 2 36888766555 78999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHhCCcEEEeC
Q 046057 1043 DFILVPSIFEPCGLTQLVAMRYGSIPVVRK 1072 (1198)
Q Consensus 1043 Di~LvPS~~EpfGLt~LEAMa~G~PvIvt~ 1072 (1198)
|++|.+ .|.|+.|++++|+|.|+-.
T Consensus 227 DlvI~~-----gG~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 227 NKLIIS-----ASSLVNEALLLKANFKAIC 251 (282)
T ss_dssp EEEEEE-----SSHHHHHHHHTTCCEEEEC
T ss_pred CEEEEC-----CcHHHHHHHHcCCCEEEEe
Confidence 999984 4799999999999999864
No 64
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=96.80 E-value=0.001 Score=63.89 Aligned_cols=69 Identities=14% Similarity=0.324 Sum_probs=49.2
Q ss_pred CCCCCCcEEEEee--cCCccc-cccceecccc---cCCCCeEEEEEEecCCceeEeEEEE---cCCcccccCCCCceEEE
Q 046057 288 TLKNEPDVLIMGA--FNDWRW-KSFTFRLNKT---HLKGDWWSCQVHVPKEAFKIDFVFF---NGQNIYENNDQKDFCIA 358 (1198)
Q Consensus 288 ~L~~~~~v~ih~G--fN~W~~-~~~~~~~~~t---~~~~dWw~~~v~VP~~A~~lnFvF~---dg~~~wDNN~g~d~~~~ 358 (1198)
.|+-+-.|.++|- +|+|+. ..+....... ..+.|=|..+|.+|+. +.||.. +|..-||||+|+||.+.
T Consensus 29 NlafeK~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~~---~eFcIrY~v~g~eyWDNN~g~NY~v~ 105 (106)
T 2djm_A 29 NIAYSKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKGI---KEFYIKYEVSGKTYYDNNNSANYQVS 105 (106)
T ss_dssp CSSSCEEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSSE---EEEEEEEEESSCEEEECSSSSCEECC
T ss_pred ecCcCcEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCCC---eEEEEEEEECCcEEEcCCCCeeEEEe
Confidence 4677889999988 999988 4432221111 2245559999999863 366654 67899999999999875
Q ss_pred E
Q 046057 359 V 359 (1198)
Q Consensus 359 V 359 (1198)
|
T Consensus 106 ~ 106 (106)
T 2djm_A 106 T 106 (106)
T ss_dssp C
T ss_pred C
Confidence 4
No 65
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.32 E-value=0.012 Score=65.47 Aligned_cols=116 Identities=19% Similarity=0.105 Sum_probs=77.0
Q ss_pred HHHHHHHhCCCCCCCcEEEEEec-CCCccCHH--HHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCC-CCc
Q 046057 948 KEALQQKVGLRKSDLPLVGIITR-LTHQKGIH--LIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSH-ADR 1023 (1198)
Q Consensus 948 k~aLrq~lGL~~~d~plIg~VGR-L~~qKGid--lIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~-~dr 1023 (1198)
++.+++.+|+......+++..|. ..+.|.+. .+.+++..+.++++++|++|+..+ .+..+++.+.++... ...
T Consensus 167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e---~~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKD---HEAGNEILAALNTEQQAWC 243 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGG---HHHHHHHHTTSCHHHHTTE
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhh---HHHHHHHHHhhhhccccce
Confidence 45567788876323345555565 55667654 788888888777999999986532 233344443221000 123
Q ss_pred EEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1024 ARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1024 V~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
+.+.+..+-.++..+++.||++|.+. .|..-| |+++|+|+|+-
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 45667778888999999999999875 355555 99999999983
No 66
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=93.19 E-value=0.28 Score=53.81 Aligned_cols=80 Identities=11% Similarity=0.211 Sum_probs=52.8
Q ss_pred cEEEEEEeCCCCCCCCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecCC----CCCCc
Q 046057 451 DLVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGP----PGKAI 526 (1198)
Q Consensus 451 ~~V~v~YN~~~g~L~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~~----~~~~~ 526 (1198)
-+|++.|. .++++|+|-|.||+|... ..|.+....+| .|.+++.+|.+-+..-|+. ||. |....
T Consensus 4 vpv~f~W~------~~a~~V~V~GsF~~W~~~----~~m~k~~~~~G-~f~~tv~LppG~y~YKFiV-DG~w~~Dp~~p~ 71 (252)
T 2qlv_B 4 VPVEIRWQ------QGGSKVYVTGSFTKWRKM----IGLIPDSDNNG-SFHVKLRLLPGTHRFRFIV-DNELRVSDFLPT 71 (252)
T ss_dssp EEEEEEEC------SCCSCEEEEEGGGTTSSC----EECEECSSSTT-CEEEEEEECSEEEEEEEEE-TTEEECCTTSCE
T ss_pred EEEEEEEe------CCCcEEEEEEEeCCCcCc----ccceeccCCCC-cEEEEEECCCCEEEEEEEE-CCEEEeCCCCCE
Confidence 46899998 267999999999999832 34554332333 6999999999989998876 553 22233
Q ss_pred cccCCCCcceEEEecC
Q 046057 527 VYDNNSRQDFHAIVPK 542 (1198)
Q Consensus 527 ~wDNN~g~dyh~~V~~ 542 (1198)
..|+.++.|=-+.|.+
T Consensus 72 ~~d~~G~~nNvi~V~~ 87 (252)
T 2qlv_B 72 ATDQMGNFVNYIEVRQ 87 (252)
T ss_dssp EBCSSCCCEEEEEECC
T ss_pred EecCCCcCcceeeccC
Confidence 3444444444445544
No 67
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=92.50 E-value=0.59 Score=54.92 Aligned_cols=141 Identities=9% Similarity=-0.026 Sum_probs=75.7
Q ss_pred HHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEE-EecCCChhhHHHHHHHHHHhCCCCCCcEEEEcc
Q 046057 951 LQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVL-LGSAPDPRIQNDFVNLANELHSSHADRARLCLT 1029 (1198)
Q Consensus 951 Lrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVI-vGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~ 1029 (1198)
+.+-++...+...++++.|.+... ..+.+.+.+..+...+.+|++ +|......+.+.+. ++. ++++.+..+
T Consensus 261 ~~~wl~~~~~~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~---~~~----~~~~~v~~w 332 (456)
T 2c1x_A 261 CLQWLKERKPTSVVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFL---EKT----RGYGMVVPW 332 (456)
T ss_dssp HHHHHHTSCTTCEEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHH---HHH----TTTEEEESC
T ss_pred HHHHHhcCCCcceEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHH---hhc----CCceEEecC
Confidence 334444332344566667777543 334444444333334667665 45421111111222 221 357888877
Q ss_pred CChHHHHHHHH--HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCC-CcEEEEcC--
Q 046057 1030 YDEPLSHLIYA--GADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLE-PNGFSFDG-- 1104 (1198)
Q Consensus 1030 ~d~~~l~~iyA--~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~-~nG~lf~~-- 1104 (1198)
.++ ..+++ ++|++|.= +-..+++||+++|+|.|+-... .|...+ |+..... ..|..++.
T Consensus 333 ~pq---~~vL~h~~~~~fvth----~G~~S~~Eal~~GvP~i~~P~~--~dQ~~N-------a~~l~~~~g~g~~l~~~~ 396 (456)
T 2c1x_A 333 APQ---AEVLAHEAVGAFVTH----CGWNSLWESVAGGVPLICRPFF--GDQRLN-------GRMVEDVLEIGVRIEGGV 396 (456)
T ss_dssp CCH---HHHHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCS--TTHHHH-------HHHHHHTSCCEEECGGGS
T ss_pred CCH---HHHhcCCcCCEEEec----CCcchHHHHHHhCceEEecCCh--hhHHHH-------HHHHHHHhCeEEEecCCC
Confidence 665 35777 77888842 3457999999999999997542 222211 1111112 45777753
Q ss_pred CCHHHHHHHHh
Q 046057 1105 ADIAGVDYALN 1115 (1198)
Q Consensus 1105 ~D~~~La~AL~ 1115 (1198)
-+.+.|.++|.
T Consensus 397 ~~~~~l~~~i~ 407 (456)
T 2c1x_A 397 FTKSGLMSCFD 407 (456)
T ss_dssp CCHHHHHHHHH
T ss_pred cCHHHHHHHHH
Confidence 35777876666
No 68
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=91.55 E-value=1.8 Score=50.93 Aligned_cols=145 Identities=10% Similarity=0.021 Sum_probs=77.5
Q ss_pred HHHHHhCCCCCCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEcc
Q 046057 950 ALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLT 1029 (1198)
Q Consensus 950 aLrq~lGL~~~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~ 1029 (1198)
.+.+-+....+...++++.|.+...-+.+.+.+++..+...+.+|+++-......+.+.+.+.... ++++.+..+
T Consensus 265 ~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~-----~~~~~v~~w 339 (463)
T 2acv_A 265 LILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL-----EGKGMICGW 339 (463)
T ss_dssp HHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH-----HCSEEEESS
T ss_pred hHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc-----CCCEEEEcc
Confidence 344445433234456677787762223333333333333347788775432101111222222100 246777776
Q ss_pred CChHHHHHHHH--HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhc-cCCCCcEEEE-c--
Q 046057 1030 YDEPLSHLIYA--GADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQA-LDLEPNGFSF-D-- 1103 (1198)
Q Consensus 1030 ~d~~~l~~iyA--~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~-~~~~~nG~lf-~-- 1103 (1198)
.++. .+|+ ++|++|.= +-..+++||+++|+|.|+-... .|...+ |+. ......|+.+ .
T Consensus 340 ~pq~---~vL~h~~~~~fvth----~G~~s~~Eal~~GvP~i~~P~~--~dQ~~N-------a~~lv~~~g~g~~l~~~~ 403 (463)
T 2acv_A 340 APQV---EVLAHKAIGGFVSH----CGWNSILESMWFGVPILTWPIY--AEQQLN-------AFRLVKEWGVGLGLRVDY 403 (463)
T ss_dssp CCHH---HHHHSTTEEEEEEC----CCHHHHHHHHHTTCCEEECCCS--TTHHHH-------HHHHHHTSCCEEESCSSC
T ss_pred CCHH---HHhCCCccCeEEec----CCchhHHHHHHcCCCeeeccch--hhhHHH-------HHHHHHHcCeEEEEeccc
Confidence 6652 4565 68888843 3448999999999999997552 222211 111 1112568877 2
Q ss_pred -----CCCHHHHHHHHh
Q 046057 1104 -----GADIAGVDYALN 1115 (1198)
Q Consensus 1104 -----~~D~~~La~AL~ 1115 (1198)
.-+.+.|.++|.
T Consensus 404 ~~~~~~~~~~~l~~ai~ 420 (463)
T 2acv_A 404 RKGSDVVAAEEIEKGLK 420 (463)
T ss_dssp CTTCCCCCHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHH
Confidence 237788988887
No 69
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=91.47 E-value=0.33 Score=53.25 Aligned_cols=58 Identities=14% Similarity=0.338 Sum_probs=46.3
Q ss_pred CeEEEEEcccCCCCCCCCcEEEEeecCCccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcC
Q 046057 276 QDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNG 343 (1198)
Q Consensus 276 ~~v~v~yN~~l~~L~~~~~v~ih~GfN~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg 343 (1198)
-++++.|.+ ++..|.|.+-||+|... ..|.+.....+.|.+++.+|++-|..-|+. ||
T Consensus 4 vpv~f~W~~------~a~~V~V~GsF~~W~~~---~~m~k~~~~~G~f~~tv~LppG~y~YKFiV-DG 61 (252)
T 2qlv_B 4 VPVEIRWQQ------GGSKVYVTGSFTKWRKM---IGLIPDSDNNGSFHVKLRLLPGTHRFRFIV-DN 61 (252)
T ss_dssp EEEEEEECS------CCSCEEEEEGGGTTSSC---EECEECSSSTTCEEEEEEECSEEEEEEEEE-TT
T ss_pred EEEEEEEeC------CCcEEEEEEEeCCCcCc---ccceeccCCCCcEEEEEECCCCEEEEEEEE-CC
Confidence 468888883 56899999999999543 467764434557999999999999999998 76
No 70
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=90.84 E-value=0.9 Score=42.48 Aligned_cols=58 Identities=19% Similarity=0.404 Sum_probs=41.2
Q ss_pred CCCCcEEEEEEeCCCCCCCCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecC
Q 046057 447 FKGEDLVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADG 520 (1198)
Q Consensus 447 ~~aG~~V~v~YN~~~g~L~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~ 520 (1198)
+...-+|++.|.+ +|++|+|-|.||+|. . ..|.+. .| -|+++|.+|...+..-|+. ||
T Consensus 7 ~~~~~~v~F~wap------~a~~V~v~GdFn~W~-~----~~m~~~---~g-~w~~~v~l~~G~~~YKf~V-dG 64 (96)
T 1z0n_A 7 PAQARPTVFRWTG------GGKEVYLSGSFNNWS-K----LPMTRS---QN-NFVAILDLPEGEHQYKFFV-DG 64 (96)
T ss_dssp ---CEEEEEEECS------CCSCEEEEEGGGTTC-C----EECEEE---TT-EEEEEEEECSEEEEEEEEE-TT
T ss_pred CCCceEEEEEECC------CCcEEEEEEEeCCCc-c----ccCEEC---CC-EEEEEEEccCCCEEEEEEE-CC
Confidence 4455677888863 589999999999998 2 234432 13 5999999999777777876 65
No 71
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=90.17 E-value=0.4 Score=51.62 Aligned_cols=45 Identities=11% Similarity=0.057 Sum_probs=33.4
Q ss_pred cEEEEccCChHHHHHHHH-HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC
Q 046057 1023 RARLCLTYDEPLSHLIYA-GADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1023 rV~f~g~~d~~~l~~iyA-~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
++..+ .|.+ .+..+|+ .||++|.= +-..|++||+++|+|.|+-..
T Consensus 115 ~v~v~-~f~~-~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~ 160 (224)
T 2jzc_A 115 KVIGF-DFST-KMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVN 160 (224)
T ss_dssp EEEEC-CSSS-SHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECC
T ss_pred eEEEe-eccc-hHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcC
Confidence 44444 4432 3678899 99999954 445899999999999998644
No 72
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=89.76 E-value=1.6 Score=54.05 Aligned_cols=58 Identities=9% Similarity=0.129 Sum_probs=42.7
Q ss_pred eEEEEEcccCCCCCCCCcEEEEeecCCccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcCC
Q 046057 277 DIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQ 344 (1198)
Q Consensus 277 ~v~v~yN~~l~~L~~~~~v~ih~GfN~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg~ 344 (1198)
+|+..|... .++..|.|-+-||+|.-.. ..|.+. ++.|.+++.+|++.|..=|+. ||.
T Consensus 19 ~v~f~~~~~----~~~~~v~~~G~Fn~w~~~~--~~~~~~---~~~~~~~~~L~~g~~~y~f~v-dg~ 76 (696)
T 4aee_A 19 IVKFTRHWP----QYAKNIYLIGEFTSLYPGF--VKLRKI---EEQGIVYLKLWPGEYGYGFQI-DND 76 (696)
T ss_dssp EEEEEEECC----TTCSCEEEEETTSCSSTTS--CBCEEE---TTEEEEEEEECSEEEEEEEEE-TTC
T ss_pred EEEEEEECC----CCCcEEEEEEecCCCCCCC--cceEec---CCeEEEEEEcCCceEEEEEEE-CCE
Confidence 466666642 2568999999999995543 345544 345999999999999988877 774
No 73
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=89.54 E-value=1.3 Score=48.78 Aligned_cols=98 Identities=18% Similarity=0.115 Sum_probs=66.6
Q ss_pred CcEEEEEecCCCccC--HHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 962 LPLVGIITRLTHQKG--IHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 962 ~plIg~VGRL~~qKG--idlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
..+++..|.-.+.|. .+.+.+.+..+.+++.++|++++++. -.+..+++++.+ + ++.+++..+-.++..++
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~--e~~~~~~i~~~~----~-~~~l~g~~sl~el~ali 251 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH--EEERAKRLAEGF----A-YVEVLPKMSLEGVARVL 251 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH--HHHHHHHHHTTC----T-TEEECCCCCHHHHHHHH
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH--HHHHHHHHHhhC----C-cccccCCCCHHHHHHHH
Confidence 334555555455666 44788888888777899998743321 122334444321 2 46778888888899999
Q ss_pred HHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1040 AGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
+.||++|.+- .|..-| |.++|+|+|+=
T Consensus 252 ~~a~l~I~~D----SG~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 252 AGAKFVVSVD----TGLSHL-TAALDRPNITV 278 (326)
T ss_dssp HTCSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred HhCCEEEecC----CcHHHH-HHHcCCCEEEE
Confidence 9999999773 366667 77799999983
No 74
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=89.20 E-value=1.8 Score=51.05 Aligned_cols=132 Identities=9% Similarity=-0.019 Sum_probs=73.5
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHH-HHHHHHhCCCCCCcEEEEccCChHHHHHHH
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDF-VNLANELHSSHADRARLCLTYDEPLSHLIY 1039 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L-~~la~eLgl~~~drV~f~g~~d~~~l~~iy 1039 (1198)
...++++.|.+... ..+.+.+.+..+...+.+|+.+-.... ...+ ..+.++. ++++.+..+.++ ..++
T Consensus 273 ~~vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~---~~~lp~~~~~~~----~~~~~vv~w~Pq---~~vL 341 (454)
T 3hbf_A 273 SSVVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP---KEKLPKGFLERT----KTKGKIVAWAPQ---VEIL 341 (454)
T ss_dssp TCEEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH---HHHSCTTHHHHT----TTTEEEESSCCH---HHHH
T ss_pred CceEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc---hhcCCHhHHhhc----CCceEEEeeCCH---HHHH
Confidence 34466667777532 233333333333334777777533211 1111 1122221 367888877775 4788
Q ss_pred HHccEEEEcCCCCCCc-HHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCC-CCcEEEEcC--CCHHHHHHHHh
Q 046057 1040 AGADFILVPSIFEPCG-LTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDL-EPNGFSFDG--ADIAGVDYALN 1115 (1198)
Q Consensus 1040 A~ADi~LvPS~~EpfG-Lt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~-~~nG~lf~~--~D~~~La~AL~ 1115 (1198)
+.+|+-++=++ || .+++||+++|+|.|+-... .|...+ |+.... -..|..++. -+.+.|.++|.
T Consensus 342 ~h~~v~~fvtH---~G~~S~~Eal~~GvP~i~~P~~--~DQ~~N-------a~~v~~~~g~Gv~l~~~~~~~~~l~~av~ 409 (454)
T 3hbf_A 342 KHSSVGVFLTH---SGWNSVLECIVGGVPMISRPFF--GDQGLN-------TILTESVLEIGVGVDNGVLTKESIKKALE 409 (454)
T ss_dssp HSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCS--TTHHHH-------HHHHHTTSCSEEECGGGSCCHHHHHHHHH
T ss_pred hhcCcCeEEec---CCcchHHHHHHcCCCEecCccc--ccHHHH-------HHHHHHhhCeeEEecCCCCCHHHHHHHHH
Confidence 99995444343 44 6899999999999997653 232221 111111 156777764 46778886666
No 75
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=86.68 E-value=3.8 Score=48.36 Aligned_cols=136 Identities=7% Similarity=-0.060 Sum_probs=71.1
Q ss_pred CCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCC-------------hhhHHHH-HHHHHHhCCCCCCc-EE
Q 046057 961 DLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPD-------------PRIQNDF-VNLANELHSSHADR-AR 1025 (1198)
Q Consensus 961 d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpd-------------p~i~~~L-~~la~eLgl~~~dr-V~ 1025 (1198)
...++++.|.+.. ...+.+.+.+..+...+.+|+++-..+. ..+...+ ....++.+ ++ +.
T Consensus 268 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~----~~g~~ 342 (480)
T 2vch_A 268 GSVLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTK----KRGFV 342 (480)
T ss_dssp TCEEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTT----TTEEE
T ss_pred CceEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhC----CCeEE
Confidence 4456677787753 2444554444444445788877532211 0010000 11111111 22 33
Q ss_pred EEccCChHHHHHHHHHccEEEEcCCCCCCc-HHHHHHHHhCCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcC
Q 046057 1026 LCLTYDEPLSHLIYAGADFILVPSIFEPCG-LTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDG 1104 (1198)
Q Consensus 1026 f~g~~d~~~l~~iyA~ADi~LvPS~~EpfG-Lt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~ 1104 (1198)
+.++.++ ..+++.+++-++=++ || .+++||+++|+|.|+-... .|...+. .+. ......|..+..
T Consensus 343 v~~w~Pq---~~vL~h~~v~~fvtH---gG~~S~~Eal~~GvP~i~~P~~--~DQ~~na----~~l--~~~~G~g~~l~~ 408 (480)
T 2vch_A 343 IPFWAPQ---AQVLAHPSTGGFLTH---CGWNSTLESVVSGIPLIAWPLY--AEQKMNA----VLL--SEDIRAALRPRA 408 (480)
T ss_dssp EESCCCH---HHHHHSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCS--TTHHHHH----HHH--HHTTCCEECCCC
T ss_pred EeCccCH---HHHhCCCCcCeEEec---ccchhHHHHHHcCCCEEecccc--ccchHHH----HHH--HHHhCeEEEeec
Confidence 3335554 378999996333332 44 6899999999999996553 2332221 010 011255776653
Q ss_pred -----CCHHHHHHHHh
Q 046057 1105 -----ADIAGVDYALN 1115 (1198)
Q Consensus 1105 -----~D~~~La~AL~ 1115 (1198)
-+.+.|.++|.
T Consensus 409 ~~~~~~~~~~l~~av~ 424 (480)
T 2vch_A 409 GDDGLVRREEVARVVK 424 (480)
T ss_dssp CTTSCCCHHHHHHHHH
T ss_pred ccCCccCHHHHHHHHH
Confidence 36788887777
No 76
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=86.27 E-value=0.75 Score=51.28 Aligned_cols=58 Identities=17% Similarity=0.386 Sum_probs=43.2
Q ss_pred CeEEEEEcccCCCCCCCCcEEEEeecCCccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcC
Q 046057 276 QDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNG 343 (1198)
Q Consensus 276 ~~v~v~yN~~l~~L~~~~~v~ih~GfN~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg 343 (1198)
.+|++.|.+- ++..|.+-+-||+|. ....|.+.. +++.|.+++.+|++-|..-|+. ||
T Consensus 170 ~~v~f~~~~~-----~~~~V~v~GsF~~W~---~~~~l~k~~-~~g~~~~~~~L~~G~y~YkFiV-DG 227 (294)
T 3nme_A 170 KTVTLTLKDK-----GFSRVEISGLDIGWG---QRIPLTLGK-GTGFWILKRELPEGQFEYKYII-DG 227 (294)
T ss_dssp EEEEEEEECS-----SCSCEEEEETTTEEE---EEEECEECT-TTCEEEEEEEECSEEEEEEEEE-TT
T ss_pred ccceeeeccC-----CCCEEEEEEeccCCC---CcccceEcC-CCCEEEEEEECCCceEEEEEEE-CC
Confidence 3566666632 457899999999996 235666644 2456999999999999999997 76
No 77
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=86.03 E-value=7.3 Score=45.80 Aligned_cols=130 Identities=12% Similarity=0.040 Sum_probs=71.2
Q ss_pred CcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEE-ecCC---Ch-hhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 962 LPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLL-GSAP---DP-RIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 962 ~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIv-Gsgp---dp-~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
..++++.|.+.. .....+.+.+..+...+.+|+++ |... +. .+.+.+. +++ ++++.+..+.++.
T Consensus 296 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~---~~~----~~~~~v~~~~pq~--- 364 (482)
T 2pq6_A 296 SVVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFT---NEI----ADRGLIASWCPQD--- 364 (482)
T ss_dssp CEEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHH---HHH----TTTEEEESCCCHH---
T ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHH---Hhc----CCCEEEEeecCHH---
Confidence 446666677642 23333444444444457888775 3210 00 0112222 222 3678888877652
Q ss_pred HHHHHccE--EEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccccccccccchhhhhcc-CCCCcEEEEc-CCCHHHHHH
Q 046057 1037 LIYAGADF--ILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQAL-DLEPNGFSFD-GADIAGVDY 1112 (1198)
Q Consensus 1037 ~iyA~ADi--~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~d~~~~~~~~~-~~~~nG~lf~-~~D~~~La~ 1112 (1198)
.+++.+++ +|. + +-..+++||+++|+|.|+-... .|-..+ |+.. .....|+.++ .-+.+.|.+
T Consensus 365 ~~L~h~~~~~~vt--h--~G~~s~~Eal~~GvP~i~~P~~--~dQ~~n-------a~~~~~~~G~g~~l~~~~~~~~l~~ 431 (482)
T 2pq6_A 365 KVLNHPSIGGFLT--H--CGWNSTTESICAGVPMLCWPFF--ADQPTD-------CRFICNEWEIGMEIDTNVKREELAK 431 (482)
T ss_dssp HHHTSTTEEEEEE--C--CCHHHHHHHHHHTCCEEECCCS--TTHHHH-------HHHHHHTSCCEEECCSSCCHHHHHH
T ss_pred HHhcCCCCCEEEe--c--CCcchHHHHHHcCCCEEecCcc--cchHHH-------HHHHHHHhCEEEEECCCCCHHHHHH
Confidence 57876665 552 2 3347999999999999997653 222211 1111 1125677775 236778886
Q ss_pred HHh
Q 046057 1113 ALN 1115 (1198)
Q Consensus 1113 AL~ 1115 (1198)
+|.
T Consensus 432 ~i~ 434 (482)
T 2pq6_A 432 LIN 434 (482)
T ss_dssp HHH
T ss_pred HHH
Confidence 666
No 78
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=85.51 E-value=2.3 Score=39.65 Aligned_cols=46 Identities=17% Similarity=0.573 Sum_probs=36.3
Q ss_pred CCCCcEEEEeecCCccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcC
Q 046057 290 KNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNG 343 (1198)
Q Consensus 290 ~~~~~v~ih~GfN~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg 343 (1198)
.++.+|.|.+-||+|. ...|.+.. +-|.++|.+|+..+..-|+. ||
T Consensus 19 p~a~~V~v~GdFn~W~----~~~m~~~~---g~w~~~v~l~~G~~~YKf~V-dG 64 (96)
T 1z0n_A 19 GGGKEVYLSGSFNNWS----KLPMTRSQ---NNFVAILDLPEGEHQYKFFV-DG 64 (96)
T ss_dssp SCCSCEEEEEGGGTTC----CEECEEET---TEEEEEEEECSEEEEEEEEE-TT
T ss_pred CCCcEEEEEEEeCCCc----cccCEECC---CEEEEEEEccCCCEEEEEEE-CC
Confidence 4688999999999997 24566632 35999999999877888887 66
No 79
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=85.42 E-value=2.1 Score=47.72 Aligned_cols=84 Identities=15% Similarity=0.258 Sum_probs=54.1
Q ss_pred cEEEEEEeCCCCCCCCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecCC----CCCCc
Q 046057 451 DLVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGP----PGKAI 526 (1198)
Q Consensus 451 ~~V~v~YN~~~g~L~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~~----~~~~~ 526 (1198)
.+|++.|. ++ ++++|+|-|.||+|. . ...|.+... ++.|.+++.+|.+-|..-|+. ||. |....
T Consensus 170 ~~v~f~~~---~~--~~~~V~v~GsF~~W~--~--~~~l~k~~~--~g~~~~~~~L~~G~y~YkFiV-DG~w~~d~~~~~ 237 (294)
T 3nme_A 170 KTVTLTLK---DK--GFSRVEISGLDIGWG--Q--RIPLTLGKG--TGFWILKRELPEGQFEYKYII-DGEWTHNEAEPF 237 (294)
T ss_dssp EEEEEEEE---CS--SCSCEEEEETTTEEE--E--EEECEECTT--TCEEEEEEEECSEEEEEEEEE-TTEEECCTTSCE
T ss_pred ccceeeec---cC--CCCEEEEEEeccCCC--C--cccceEcCC--CCEEEEEEECCCceEEEEEEE-CCEEeeCCCCCe
Confidence 57888898 43 789999999999998 1 234444332 345999999999988888874 452 21111
Q ss_pred c-ccCCCCcceEEEecCCCCc
Q 046057 527 V-YDNNSRQDFHAIVPKSIPD 546 (1198)
Q Consensus 527 ~-wDNN~g~dyh~~V~~~~~~ 546 (1198)
. .|+.+..|=-+.|.++...
T Consensus 238 ~~~d~~G~~nn~~~v~~~~~~ 258 (294)
T 3nme_A 238 IGPNKDGHTNNYAKVVDDPTS 258 (294)
T ss_dssp ECSCTTSCCEEEEEECCCCCT
T ss_pred eeECCCCCEeEEEEECCCCcc
Confidence 2 3445444444566654333
No 80
>2j43_A Spydx; family 41, pullulanase, streptococcal, carbohydrate-binding module, glycogen binding, glycoside hydrolase; 1.6A {Streptococcus pyogenes} SCOP: b.3.1.3 b.3.1.3
Probab=83.57 E-value=30 Score=37.00 Aligned_cols=163 Identities=17% Similarity=0.247 Sum_probs=92.2
Q ss_pred CCeEEEEEcc--cCCCCCCCCcEEEE-eec-----CCcccc--ccceecccccCCCCeEEEEEEecCCceeEeEEEEcCC
Q 046057 275 DQDIEVFLNR--SLSTLKNEPDVLIM-GAF-----NDWRWK--SFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQ 344 (1198)
Q Consensus 275 G~~v~v~yN~--~l~~L~~~~~v~ih-~Gf-----N~W~~~--~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg~ 344 (1198)
-..++|.|+| .-+. -...-|| ||= .+|-.. .|+ ...+...| -.++|.+.+.+.+++|+..++.
T Consensus 2 ~~~~~vHy~r~~~dg~---y~~wgL~~W~d~~~~s~~Wp~~~~~f~-~~g~D~yG---~y~~V~l~~g~~~v~~iv~~~~ 74 (219)
T 2j43_A 2 SHHLRMHFKTLPAGES---LGSLGLWVWGDVDQPSKDWPNGAITMT-KAKKDDYG---YYLDVPLAAKHRQQVSYLINNK 74 (219)
T ss_dssp CCEEEEEESCCSTTCC---GGGEEEEEEESBSSCCCSTTTTSEEGG-GCEECSSS---EEEEEEBCSSCCCEEEEEEEET
T ss_pred CCeEEEEEecCCCCCC---ccCceEEEeCCcCCCCccCCCcccccc-CCCcCCce---eEEEEEecCCCCeEEEEEEeCC
Confidence 4578999998 4332 3457777 552 126432 221 11111222 4566777678899999998863
Q ss_pred cccccCCCCceEEEEcCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046057 345 NIYENNDQKDFCIAVEGLMDALAFEDFLLEEKRREQEKLAKEKAEQERQEEERRRIEAEHAAIEADRAQARVETERKREM 424 (1198)
Q Consensus 345 ~~wDNN~g~d~~~~V~~g~~~~~~~~~~~ee~r~~~e~la~e~aer~~~~~e~rr~~~~~aa~~a~~a~A~~~~~~~~~~ 424 (1198)
|.++.+.|=++.+..+...+.|..
T Consensus 75 --~~~~~~~D~~i~~~~~~~~evWi~------------------------------------------------------ 98 (219)
T 2j43_A 75 --AGENLSKDQHISLLTPKMNEVWID------------------------------------------------------ 98 (219)
T ss_dssp --TCCBSSCCEEEECSSTTCCEEEEC------------------------------------------------------
T ss_pred --CcccCCcceeEEeccCCCcEEEEe------------------------------------------------------
Confidence 445668888887654322222221
Q ss_pred HHHHHHHhhccCCcEEEecCCCCCCCcEEEEEEeCCCCCCCCCCceEEEEEe----CCCCCCccceeeeccccCCCCCeE
Q 046057 425 LRELKKKAARSVDNVWYIEPSEFKGEDLVRLYYNKQSSSLAHAKELWIHGGY----NNWKDGLSIVARLVSSERTDGDWW 500 (1198)
Q Consensus 425 ~~~~~~~a~~~~~~v~~~~P~~~~aG~~V~v~YN~~~g~L~ga~~I~lh~G~----N~W~~~~~~~~~l~~~~~~~g~ww 500 (1198)
+...+...+| .+-.+|+|+|+|..|.-.+ =.+|+=.+. -+|..+..+ ...+.-| =
T Consensus 99 ----------~g~~~~~~~P---~~~~~v~IhY~r~dg~Y~~-w~Lw~W~d~~~~s~~W~~~~~f-----t~~D~yG--~ 157 (219)
T 2j43_A 99 ----------ENYHAHAYRP---LKEGYLRINYHNQSGHYDN-LAVWTFKDVKTPTTDWPNGLDL-----SHKGHYG--A 157 (219)
T ss_dssp ----------TTCCEESSCC---CCTTEEEEEEECSSCCCTT-EEEEEEESBSSCCCSTTCCEEC-----CEEETTE--E
T ss_pred ----------CCCccccccc---ccCceeEEEEeCCCCCccc-ceEEEcCCCCCcccCCCCCCCc-----cccCCce--E
Confidence 1234445555 3445699999987766431 234442222 046533221 1112234 4
Q ss_pred EEEEEecCCceEEEEEEecCC
Q 046057 501 YAKVSVPDQALVLDWVFADGP 521 (1198)
Q Consensus 501 ~atV~VP~~A~~ldFvFsD~~ 521 (1198)
++.|.++..+..|+|...++.
T Consensus 158 y~~v~l~~~~~~i~fIv~~g~ 178 (219)
T 2j43_A 158 YVDVPLKEGANEIGFLILDKS 178 (219)
T ss_dssp EEEEEBCTTCCCEEEEEEETT
T ss_pred EEEEEccCCCCeeEEEEEeCC
Confidence 455677788889999999985
No 81
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=73.33 E-value=4.8 Score=49.87 Aligned_cols=58 Identities=12% Similarity=0.161 Sum_probs=42.3
Q ss_pred cEEEEEEeCCCCCCCCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecC
Q 046057 451 DLVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADG 520 (1198)
Q Consensus 451 ~~V~v~YN~~~g~L~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~ 520 (1198)
-+|+..|.. +- ++.+|+|-|.||+|.... .+|.+. ++.|.+++.+|.+.+..-|+. ||
T Consensus 18 ~~v~f~~~~---~~-~~~~v~~~G~Fn~w~~~~---~~~~~~----~~~~~~~~~L~~g~~~y~f~v-dg 75 (696)
T 4aee_A 18 YIVKFTRHW---PQ-YAKNIYLIGEFTSLYPGF---VKLRKI----EEQGIVYLKLWPGEYGYGFQI-DN 75 (696)
T ss_dssp EEEEEEEEC---CT-TCSCEEEEETTSCSSTTS---CBCEEE----TTEEEEEEEECSEEEEEEEEE-TT
T ss_pred EEEEEEEEC---CC-CCcEEEEEEecCCCCCCC---cceEec----CCeEEEEEEcCCceEEEEEEE-CC
Confidence 357777873 21 689999999999997432 233333 235999999999988888866 76
No 82
>2c3g_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; 2.0A {Bacillus halodurans} PDB: 2c3h_A*
Probab=73.20 E-value=7.4 Score=36.80 Aligned_cols=59 Identities=14% Similarity=0.318 Sum_probs=38.8
Q ss_pred CCCeEEEEEcccCCCCCCCCcEEEE-eecC------CccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcCC
Q 046057 274 PDQDIEVFLNRSLSTLKNEPDVLIM-GAFN------DWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQ 344 (1198)
Q Consensus 274 aG~~v~v~yN~~l~~L~~~~~v~ih-~GfN------~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg~ 344 (1198)
-|..++|||+.-.+ =..|.++ |.=+ .|-.+. +|+..+.+||+.+|+. +...+++|.||.
T Consensus 3 ~~~~~tVyf~~p~~----W~~v~~Y~w~~~~~~~~~~WPG~~-----~Mt~~g~~wY~yt~~~---~~~anVIFndg~ 68 (98)
T 2c3g_A 3 MASGLTIYFKKPDS----WGTPHLYYYDTNPKVDEPTWSEAP-----EMEHYEGDWYTHTIEG---VESVRLLFKDRG 68 (98)
T ss_dssp CCCEEEEEEECCTT----CCSEEEEEEEEESCCCCCCTTTCC-----BCEEEETTEEEEEEET---CSEEEEEEEESS
T ss_pred cccceEEEEECCCC----CCcEEEEEECCCCccccCCCCCcc-----eeeEcCCCEEEEEECC---CceEEEEEECCC
Confidence 37788999996442 2247776 3221 242221 4555578999999985 478999999984
No 83
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=64.54 E-value=7.4 Score=36.72 Aligned_cols=80 Identities=15% Similarity=0.403 Sum_probs=48.2
Q ss_pred CCeEEEEEcccCCCCCCCCcEEEEee---cCCccccccceecccccC--CCCeEEEEEEecCCc-eeEeEEEEcC--Ccc
Q 046057 275 DQDIEVFLNRSLSTLKNEPDVLIMGA---FNDWRWKSFTFRLNKTHL--KGDWWSCQVHVPKEA-FKIDFVFFNG--QNI 346 (1198)
Q Consensus 275 G~~v~v~yN~~l~~L~~~~~v~ih~G---fN~W~~~~~~~~~~~t~~--~~dWw~~~v~VP~~A-~~lnFvF~dg--~~~ 346 (1198)
+..+.|.|+-.. ++...+.|.|-+. +++|.-..- ..|..+.. .+.-|.++|.+|... .+.-|+..|+ .-.
T Consensus 4 ~~~v~V~F~v~~-~t~~Ge~v~vvGs~~~LG~W~~~~a-~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v~~~~g~~~ 81 (108)
T 1ac0_A 4 PTAVAVTFDLTA-TTTYGENIYLVGSISQLGDWETSDG-IALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESDDSVE 81 (108)
T ss_dssp CCCCCEEEEEEC-CCCSSCCEECCCSSSTTCSSSGGGS-CCBBCSSSSSSCSSCEEEECCCSSSCEECCCEECCSSSCCC
T ss_pred CCeEEEEEEEee-ECCCCCEEEEEeCcHHHCCCCHHHC-ccccccccCCcCCeEEEEEEeCCCCeEEEEEEEEcCCCCEE
Confidence 344556665332 2344456666654 357966543 56666532 234589999998764 7777777664 347
Q ss_pred cccCCCCceE
Q 046057 347 YENNDQKDFC 356 (1198)
Q Consensus 347 wDNN~g~d~~ 356 (1198)
|++...+.+.
T Consensus 82 WE~g~nR~~~ 91 (108)
T 1ac0_A 82 WESDPNREYT 91 (108)
T ss_dssp CCCSSCCEEC
T ss_pred eccCCCEEEE
Confidence 9886554444
No 84
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=57.87 E-value=1.2e+02 Score=28.11 Aligned_cols=107 Identities=12% Similarity=0.105 Sum_probs=64.3
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH---HccEEEEcCCC-C-CCcHHHHHHHHh-
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA---GADFILVPSIF-E-PCGLTQLVAMRY- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA---~ADi~LvPS~~-E-pfGLt~LEAMa~- 1064 (1198)
+.+++|+.+ ++.....+..+..+.|. .|.... +.......+. ..|++++-... + .-|+.+++.++.
T Consensus 5 ~~~ilivdd--~~~~~~~l~~~L~~~g~----~v~~~~--~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~ 76 (140)
T 3h5i_A 5 DKKILIVED--SKFQAKTIANILNKYGY----TVEIAL--TGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQI 76 (140)
T ss_dssp -CEEEEECS--CHHHHHHHHHHHHHTTC----EEEEES--SHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHH
T ss_pred CcEEEEEeC--CHHHHHHHHHHHHHcCC----EEEEec--ChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhC
Confidence 456777766 55566777777776553 344332 3333334443 35888876544 4 567777777664
Q ss_pred -CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 -GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 -G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +.... .+.+... ......+|+..|.+++.|..+|.
T Consensus 77 ~~~~ii~ls~~~~-~~~~~~~---------~~~g~~~~l~KP~~~~~l~~~i~ 119 (140)
T 3h5i_A 77 SELPVVFLTAHTE-PAVVEKI---------RSVTAYGYVMKSATEQVLITIVE 119 (140)
T ss_dssp CCCCEEEEESSSS-CCCCGGG---------GGSCEEEEEETTCCHHHHHHHHH
T ss_pred CCCCEEEEECCCC-HHHHHHH---------HhCCCcEEEeCCCCHHHHHHHHH
Confidence 677776 43322 2222211 11237899999999999998887
No 85
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=57.30 E-value=4.9 Score=37.93 Aligned_cols=83 Identities=11% Similarity=0.444 Sum_probs=50.1
Q ss_pred CcEEEEEEeCCCCCCCCCCceEEEEEe---CCCCCCccceeeecccc-CCCCCeEEEEEEecCCc-eEEEEEEecCCCCC
Q 046057 450 EDLVRLYYNKQSSSLAHAKELWIHGGY---NNWKDGLSIVARLVSSE-RTDGDWWYAKVSVPDQA-LVLDWVFADGPPGK 524 (1198)
Q Consensus 450 G~~V~v~YN~~~g~L~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~-~~~g~ww~atV~VP~~A-~~ldFvFsD~~~~~ 524 (1198)
+..|+|.++-.. .+...++|+|-|.. ++|.....+ .|.... ..++..|.++|.+|.+. ...-|+-.|+. +
T Consensus 4 ~~~v~V~F~v~~-~t~~Ge~v~vvGs~~~LG~W~~~~a~--~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v~~~~--g 78 (108)
T 1ac0_A 4 PTAVAVTFDLTA-TTTYGENIYLVGSISQLGDWETSDGI--ALSADKYTSSDPLWYVTVTLPAGESFEYKFIRIESD--D 78 (108)
T ss_dssp CCCCCEEEEEEC-CCCSSCCEECCCSSSTTCSSSGGGSC--CBBCSSSSSSCSSCEEEECCCSSSCEECCCEECCSS--S
T ss_pred CCeEEEEEEEee-ECCCCCEEEEEeCcHHHCCCCHHHCc--cccccccCCcCCeEEEEEEeCCCCeEEEEEEEEcCC--C
Confidence 344666666443 46667899999976 699854432 343332 11345599999999864 44455555532 3
Q ss_pred CccccCCCCcceE
Q 046057 525 AIVYDNNSRQDFH 537 (1198)
Q Consensus 525 ~~~wDNN~g~dyh 537 (1198)
...|.+...+.+.
T Consensus 79 ~~~WE~g~nR~~~ 91 (108)
T 1ac0_A 79 SVEWESDPNREYT 91 (108)
T ss_dssp CCCCCCSSCCEEC
T ss_pred CEEeccCCCEEEE
Confidence 3579886655554
No 86
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=57.28 E-value=60 Score=31.57 Aligned_cols=112 Identities=13% Similarity=0.106 Sum_probs=69.8
Q ss_pred hhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHH
Q 046057 987 TLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMR 1063 (1198)
Q Consensus 987 ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa 1063 (1198)
+..++.+++|+-+ ++..+..+..+.+++|. ..+.... +....-.++. .-|++++=-. -+--|+.+++.++
T Consensus 8 ~m~k~~rILiVDD--~~~~r~~l~~~L~~~G~---~~v~~a~--~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir 80 (134)
T 3to5_A 8 ILNKNMKILIVDD--FSTMRRIVKNLLRDLGF---NNTQEAD--DGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIR 80 (134)
T ss_dssp -CCTTCCEEEECS--CHHHHHHHHHHHHHTTC---CCEEEES--SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHH
T ss_pred HhCCCCEEEEEeC--CHHHHHHHHHHHHHcCC---cEEEEEC--CHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHH
Confidence 3456778888865 56677788888887775 2343322 2323223333 3578776322 3557899999887
Q ss_pred -----hCCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1064 -----YGSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1064 -----~G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
..+|+|. |..+...+... +.. .+.++|+..|.+++.|..+|.
T Consensus 81 ~~~~~~~ipvI~lTa~~~~~~~~~--------~~~--~Ga~~yl~KP~~~~~L~~~i~ 128 (134)
T 3to5_A 81 ADEELKHLPVLMITAEAKREQIIE--------AAQ--AGVNGYIVKPFTAATLKEKLD 128 (134)
T ss_dssp HSTTTTTCCEEEEESSCCHHHHHH--------HHH--TTCCEEEESSCCHHHHHHHHH
T ss_pred hCCCCCCCeEEEEECCCCHHHHHH--------HHH--CCCCEEEECCCCHHHHHHHHH
Confidence 3577776 55443333222 122 237899999999999998887
No 87
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=55.82 E-value=7.2 Score=42.16 Aligned_cols=33 Identities=27% Similarity=0.450 Sum_probs=28.0
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||++ +||.|-+=..|++.|.++||+|.+++..
T Consensus 1 MkILV----------TGatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLV----------GGGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEE----------ETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEE----------ECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 89874 4777888889999999999999999753
No 88
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=53.28 E-value=1.6e+02 Score=36.21 Aligned_cols=156 Identities=12% Similarity=0.083 Sum_probs=88.4
Q ss_pred HHhccCEEEEeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCC
Q 046057 880 AMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRK 959 (1198)
Q Consensus 880 ~~~~AD~VitVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~ 959 (1198)
.....|.+++.|+...+.+.. .++....++ +.-|. |..|.++.. ......+..+++++|++
T Consensus 475 ~~~~~D~~~~~s~~~~~~~~~--~f~~~~~~i--~~~G~------PR~D~l~~~--------~~~~~~~~~~~~~~~~~- 535 (729)
T 3l7i_A 475 ETSRWDYLISPNRYSTEIFRS--AFWMDEERI--LEIGY------PRNDVLVNR--------ANDQEYLDEIRTHLNLP- 535 (729)
T ss_dssp HHTTCSEEEESSHHHHHHHHH--HTCCCGGGE--EESCC------GGGHHHHHS--------TTCHHHHHHHHHHTTCC-
T ss_pred hhccCCEEEeCCHHHHHHHHH--HhCCCcceE--EEcCC------CchHHHhcc--------cchHHHHHHHHHHhCCC-
Confidence 345679999999988777653 233332333 33453 322221100 11233467789999998
Q ss_pred CCCcEEEEEecCCCc----cC-----HHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCC-CCCCcEEEEcc
Q 046057 960 SDLPLVGIITRLTHQ----KG-----IHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHS-SHADRARLCLT 1029 (1198)
Q Consensus 960 ~d~plIg~VGRL~~q----KG-----idlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl-~~~drV~f~g~ 1029 (1198)
.++++|++.-..... +| +..-++.+...+..+..|++-. .|.+. ..+.. ...+.+.-...
T Consensus 536 ~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~---Hp~~~-------~~~~~~~~~~~~~~~~~ 605 (729)
T 3l7i_A 536 SDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRM---HYLIS-------NALDLSGYENFAIDVSN 605 (729)
T ss_dssp SSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECC---CHHHH-------TTCCCTTCTTTEEECTT
T ss_pred CCCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEec---Ccchh-------ccccccccCCcEEeCCC
Confidence 478899998665432 11 1122344444445566555532 23211 11111 12344554444
Q ss_pred CChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEe
Q 046057 1030 YDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVR 1071 (1198)
Q Consensus 1030 ~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt 1071 (1198)
+. .+..++..||++|.= ++=++.|++..++|+|.-
T Consensus 606 ~~--di~~ll~~aD~lITD-----ySSv~fD~~~l~kPiif~ 640 (729)
T 3l7i_A 606 YN--DVSELFLISDCLITD-----YSSVMFDYGILKRPQFFF 640 (729)
T ss_dssp CS--CHHHHHHTCSEEEES-----SCTHHHHHGGGCCCEEEE
T ss_pred Cc--CHHHHHHHhCEEEee-----chHHHHhHHhhCCCEEEe
Confidence 43 367889999999942 345789999999999975
No 89
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=51.58 E-value=16 Score=44.64 Aligned_cols=48 Identities=21% Similarity=0.566 Sum_probs=35.2
Q ss_pred CCCCceEEEEEeCCCCCCccceeeeccccCCCCCeEEEEEEecCCceEEEEEEecC
Q 046057 465 AHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADG 520 (1198)
Q Consensus 465 ~ga~~I~lh~G~N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A~~ldFvFsD~ 520 (1198)
.++..+||-|.||+|..+. .+|. . .|++|.++|.+|+..|.--|++ ||
T Consensus 25 ~~~~~~yl~G~Fn~w~~~~---~~m~--~--~g~~~~~~v~L~~G~y~Y~f~v-dg 72 (645)
T 4aef_A 25 REGSYAYLLGDFNAFNEGS---FRME--Q--EGKNWKIKIALPEGVWHYAFSI-DG 72 (645)
T ss_dssp CCSSCEEEEETTTTTCTTS---SEEE--E--CSSEEEEEEEECSEEEEEEEEE-TT
T ss_pred CCCeEEEEEEcCCCCCCCc---ccce--E--cCCEEEEEEEeCCceEEEEEEE-CC
Confidence 3457899999999998533 2332 2 3568999999999877777766 54
No 90
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=50.57 E-value=94 Score=28.89 Aligned_cols=107 Identities=5% Similarity=-0.036 Sum_probs=62.8
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHHh---
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMRY--- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa~--- 1064 (1198)
..+++|+.+ ++.....+..+..+.|. .|..+... ......+. ..|++|+=.. .+.-|+.+++.++.
T Consensus 8 ~~~iLivd~--~~~~~~~l~~~L~~~g~----~v~~~~~~--~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~ 79 (147)
T 2zay_A 8 WWRIMLVDT--QLPALAASISALSQEGF----DIIQCGNA--IEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQ 79 (147)
T ss_dssp CEEEEEECT--TGGGGHHHHHHHHHHTE----EEEEESSH--HHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTT
T ss_pred CceEEEEeC--CHHHHHHHHHHHHHcCC----eEEEeCCH--HHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcc
Confidence 456777776 44456667666665543 34433332 22223332 4788887543 34567888888875
Q ss_pred --CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 --GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 --G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +.... .+.+.. +.. ....+|+..|.+.+.|..+|.
T Consensus 80 ~~~~pii~ls~~~~-~~~~~~-------~~~--~g~~~~l~kp~~~~~L~~~i~ 123 (147)
T 2zay_A 80 TASIPVIALSGRAT-AKEEAQ-------LLD--MGFIDFIAKPVNAIRLSARIK 123 (147)
T ss_dssp TTTSCEEEEESSCC-HHHHHH-------HHH--HTCSEEEESSCCHHHHHHHHH
T ss_pred cCCCCEEEEeCCCC-HHHHHH-------HHh--CCCCEEEeCCCCHHHHHHHHH
Confidence 567776 44332 222111 111 126799999999999998887
No 91
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=50.06 E-value=83 Score=29.23 Aligned_cols=109 Identities=8% Similarity=0.030 Sum_probs=64.3
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHHh---
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMRY--- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa~--- 1064 (1198)
..+++|+.+ ++.....+..+..+.+.. ..+.... +.......+. ..|++++=.. .+.-|+.+++.++.
T Consensus 5 ~~~ILivdd--~~~~~~~l~~~L~~~~~~--~~v~~~~--~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~ 78 (144)
T 3kht_A 5 SKRVLVVED--NPDDIALIRRVLDRKDIH--CQLEFVD--NGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGA 78 (144)
T ss_dssp CEEEEEECC--CHHHHHHHHHHHHHTTCC--EEEEEES--SHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSST
T ss_pred CCEEEEEeC--CHHHHHHHHHHHHhcCCC--eeEEEEC--CHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhccc
Confidence 456777765 555666777777766531 1233333 3333333333 3688877543 34568888888875
Q ss_pred --CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCC-CHHHHHHHHh
Q 046057 1065 --GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGA-DIAGVDYALN 1115 (1198)
Q Consensus 1065 --G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~-D~~~La~AL~ 1115 (1198)
.+|+|+ +.... .+.+.. + ...+..+|+..|. +.+.|..+|.
T Consensus 79 ~~~~pii~~s~~~~-~~~~~~-------~--~~~ga~~~l~Kp~~~~~~l~~~i~ 123 (144)
T 3kht_A 79 NQHTPIVILTDNVS-DDRAKQ-------C--MAAGASSVVDKSSNNVTDFYGRIY 123 (144)
T ss_dssp TTTCCEEEEETTCC-HHHHHH-------H--HHTTCSEEEECCTTSHHHHHHHHH
T ss_pred ccCCCEEEEeCCCC-HHHHHH-------H--HHcCCCEEEECCCCcHHHHHHHHH
Confidence 567776 33222 222111 1 1123789999999 9999998888
No 92
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=49.30 E-value=26 Score=34.33 Aligned_cols=64 Identities=13% Similarity=0.298 Sum_probs=40.0
Q ss_pred cEEEEEEeCCCCCCCCCCceEEEEE---eCCCCCCccceeeecccc-CCCCCeEEEEEEecCCc-eEEEEEE
Q 046057 451 DLVRLYYNKQSSSLAHAKELWIHGG---YNNWKDGLSIVARLVSSE-RTDGDWWYAKVSVPDQA-LVLDWVF 517 (1198)
Q Consensus 451 ~~V~v~YN~~~g~L~ga~~I~lh~G---~N~W~~~~~~~~~l~~~~-~~~g~ww~atV~VP~~A-~~ldFvF 517 (1198)
..|.|.++-.. ++...+.|+|-|. .++|.....+ .|.... ...+..|.++|.+|.+. ...-|+-
T Consensus 7 ~~v~V~F~v~~-~~~~ge~v~vvGs~~~LG~W~p~~av--~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 7 GPSQVAFEIRG-TLLPGEVFAICGSCDALGNWNPQNAV--ALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CCEEEEEEEEC-CCCTTCEEEEEESSGGGTTTCGGGCE--ECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CeEEEEEEEee-ecCCCCEEEEEeCCCcCCCCCccccc--cccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 34555555443 3466789999999 7899854432 443332 11345699999999763 4455554
No 93
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=49.22 E-value=89 Score=28.74 Aligned_cols=104 Identities=10% Similarity=0.112 Sum_probs=55.6
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCCCCCCcHHHHHHHHh---C
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSIFEPCGLTQLVAMRY---G 1065 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~~EpfGLt~LEAMa~---G 1065 (1198)
+.+++|+.+ ++.....+..+..+.|. .|..+.. .......+. ..|++|+| +.-|+.+++.++. .
T Consensus 18 ~~~ilivdd--~~~~~~~l~~~L~~~g~----~v~~~~~--~~~al~~l~~~~~dlvi~~---~~~g~~~~~~l~~~~~~ 86 (137)
T 2pln_A 18 SMRVLLIEK--NSVLGGEIEKGLNVKGF----MADVTES--LEDGEYLMDIRNYDLVMVS---DKNALSFVSRIKEKHSS 86 (137)
T ss_dssp CSEEEEECS--CHHHHHHHHHHHHHTTC----EEEEESC--HHHHHHHHHHSCCSEEEEC---STTHHHHHHHHHHHSTT
T ss_pred CCeEEEEeC--CHHHHHHHHHHHHHcCc----EEEEeCC--HHHHHHHHHcCCCCEEEEc---CccHHHHHHHHHhcCCC
Confidence 355666654 34445555555554432 2333222 222222222 35777733 3456777776664 6
Q ss_pred CcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCC-CHHHHHHHHh
Q 046057 1066 SIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGA-DIAGVDYALN 1115 (1198)
Q Consensus 1066 ~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~-D~~~La~AL~ 1115 (1198)
+|+|+ +.... .+.+. ++ ......+|+..|. +.+.|..+|.
T Consensus 87 ~~ii~ls~~~~-~~~~~-------~~--~~~g~~~~l~kP~~~~~~l~~~i~ 128 (137)
T 2pln_A 87 IVVLVSSDNPT-SEEEV-------HA--FEQGADDYIAKPYRSIKALVARIE 128 (137)
T ss_dssp SEEEEEESSCC-HHHHH-------HH--HHTTCSEEEESSCSCHHHHHHHHH
T ss_pred ccEEEEeCCCC-HHHHH-------HH--HHcCCceeeeCCCCCHHHHHHHHH
Confidence 77776 43322 11111 11 1223789999999 9999999888
No 94
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=48.67 E-value=24 Score=33.58 Aligned_cols=42 Identities=7% Similarity=0.101 Sum_probs=30.8
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCC
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYD 754 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~ 754 (1198)
..+|||+++|. ...+.+.++..+-++..++|.+|++..-.++
T Consensus 4 ~~~mkIlL~C~------aGmSTsllv~km~~~a~~~gi~v~i~a~~~~ 45 (108)
T 3nbm_A 4 SKELKVLVLCA------GSGTSAQLANAINEGANLTEVRVIANSGAYG 45 (108)
T ss_dssp -CCEEEEEEES------SSSHHHHHHHHHHHHHHHHTCSEEEEEEETT
T ss_pred ccCceEEEECC------CCCCHHHHHHHHHHHHHHCCCceEEEEcchH
Confidence 35799999994 1234566777888888899999999874433
No 95
>2f5x_A BUGD; periplasmic binding protein, transport protein; 1.72A {Bordetella pertussis tohama I}
Probab=46.89 E-value=2e+02 Score=31.82 Aligned_cols=155 Identities=11% Similarity=-0.011 Sum_probs=85.1
Q ss_pred cEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH-H
Q 046057 963 PLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA-G 1041 (1198)
Q Consensus 963 plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA-~ 1041 (1198)
+.++++..=.+.|.+..|+.+++.-- ..+.+-..|.|... .-..+.+.+..|++ ...|-+- +.. +.+..++. .
T Consensus 112 ~~~lvv~~ds~~~sl~dL~~~ak~~p-~~~~~g~~g~Gs~~--hl~~~~l~~~~Gi~-~~~Vpy~-G~~-~a~~aL~~G~ 185 (312)
T 2f5x_A 112 PMTIIARGDFPPNNIKELAEYVKKNA-DKISLANAGIGAAS--HLCGTMLVEALGVN-LLTIPYK-GTA-PAMNDLLGKQ 185 (312)
T ss_dssp EEEEEECTTCSCCSHHHHHHHHHHHG-GGCEEEESSTTSHH--HHHHHHHHHHHTCC-CEEEECS-SHH-HHHHHHHTTS
T ss_pred cEEEEEeCCCCCCCHHHHHHHHHhCC-CceEEeCCCCCcHH--HHHHHHHHHHHCCC-eEEeccC-ChH-HHHHHHHcCC
Confidence 46666766678889998888765421 12333333323211 22234566667774 1223322 222 33344443 6
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC-----ccccccccccccchhhhhccCC------CCcEEEEcCCCHHHH
Q 046057 1042 ADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT-----GGLYDTVFDVDHDKERAQALDL------EPNGFSFDGADIAGV 1110 (1198)
Q Consensus 1042 ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t-----GGl~E~V~d~d~~~~~~~~~~~------~~nG~lf~~~D~~~L 1110 (1198)
.|+++... -+.++.+..|..-+..-+ ..++|+ . .....|. ...|+.++.+.++++
T Consensus 186 VD~~~~~~------~~~~~~i~~g~lr~Lav~~~~r~~~~pdv-P-------t~~E~G~~~~~~~~w~gl~ap~g~p~~v 251 (312)
T 2f5x_A 186 VDLMCDQT------TNTTQQITSGKVKAYAVTSLKRVPTLPDL-P-------TMDESGYKGFEVGIWHGMWAPKGTPKPV 251 (312)
T ss_dssp SCEEEEEH------HHHHHHHHTTSSEEEEECSSSCCTTSTTS-C-------BTTTTTCTTCCCEEEEEEEEETTCCHHH
T ss_pred ccEEEech------HHHHHHHHcCCeEEEEEcCccchhhcCCC-C-------CHhhcCCCCeeEEEEEEEEEcCCCCHHH
Confidence 88887653 245566677765433211 111111 0 0000111 136888888888999
Q ss_pred HHHHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHHH
Q 046057 1111 DYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVME 1177 (1198)
Q Consensus 1111 a~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am~ 1177 (1198)
.+.|+ +++.....++++...+.+.++.
T Consensus 252 v~~l~----------------------------------------~al~~~~~~p~~~~~~~~~g~~ 278 (312)
T 2f5x_A 252 VDKLV----------------------------------------KSLQAGLADPKFQERMKQLGAE 278 (312)
T ss_dssp HHHHH----------------------------------------HHHHHHHTCHHHHHHHHHTTCE
T ss_pred HHHHH----------------------------------------HHHHHHHcCHHHHHHHHHCCCc
Confidence 99998 8888888999987777666543
No 96
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=46.47 E-value=71 Score=34.22 Aligned_cols=131 Identities=13% Similarity=0.189 Sum_probs=71.6
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhC--CCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceec
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDL--NHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVE 785 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~--GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~ 785 (1198)
..|||+++.+ |.+.....+.++|.+. +++|..|....+... . .......
T Consensus 21 ~~~rI~~l~S---------G~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~-----~---------------~~~A~~~ 71 (229)
T 3auf_A 21 HMIRIGVLIS---------GSGTNLQAILDGCREGRIPGRVAVVISDRADAY-----G---------------LERARRA 71 (229)
T ss_dssp TCEEEEEEES---------SCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCH-----H---------------HHHHHHT
T ss_pred CCcEEEEEEe---------CCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchH-----H---------------HHHHHHc
Confidence 4589999863 3356788888888876 577765553311100 0 0122345
Q ss_pred CeEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEE
Q 046057 786 GLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVF 865 (1198)
Q Consensus 786 Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~ 865 (1198)
|++++.+++.. + . + | .-|...+++.|+. .+||+|.+-.|..-+-+.++.. + . --++
T Consensus 72 gIp~~~~~~~~-~-~---------~--r-~~~~~~~~~~l~~--~~~Dliv~agy~~IL~~~~l~~-~------~-~~~i 127 (229)
T 3auf_A 72 GVDALHMDPAA-Y-P---------S--R-TAFDAALAERLQA--YGVDLVCLAGYMRLVRGPMLTA-F------P-NRIL 127 (229)
T ss_dssp TCEEEECCGGG-S-S---------S--H-HHHHHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHH-S------T-TCEE
T ss_pred CCCEEEECccc-c-c---------c--h-hhccHHHHHHHHh--cCCCEEEEcChhHhCCHHHHhh-c------c-CCEE
Confidence 78887766431 1 0 0 1 1233456666766 4899999987754433333332 2 1 1257
Q ss_pred EecCCch----hhhHHHHHHhccCEEEEeC
Q 046057 866 TIHNLEF----GTHHIGKAMTYADKATTVS 891 (1198)
Q Consensus 866 tIHn~~~----~~~li~~~~~~AD~VitVS 891 (1198)
.+|-.-. +..-+.+++..-+..+.++
T Consensus 128 NiHpSLLP~yrG~~pi~~Ai~~G~~~tGvT 157 (229)
T 3auf_A 128 NIHPSLLPAFPGLEAQRQALEHGVKVAGCT 157 (229)
T ss_dssp EEESSCTTSSCSSCHHHHHHHHTCSEEEEE
T ss_pred EEccCcCcCCCCcCHHHHHHHcCCCeEEEE
Confidence 7776432 3445556665555555543
No 97
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=46.18 E-value=1.8e+02 Score=26.67 Aligned_cols=108 Identities=10% Similarity=0.008 Sum_probs=62.7
Q ss_pred CCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHHh--
Q 046057 990 RGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMRY-- 1064 (1198)
Q Consensus 990 ~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa~-- 1064 (1198)
...+++|+.+ ++.....+..+..+.|. +|..+.. .......+. ..|++|+-.. .+.-|+.+++.++.
T Consensus 6 ~~~~iLivdd--~~~~~~~l~~~L~~~g~----~v~~~~~--~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~ 77 (142)
T 3cg4_A 6 HKGDVMIVDD--DAHVRIAVKTILSDAGF----HIISADS--GGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNS 77 (142)
T ss_dssp CCCEEEEECS--CHHHHHHHHHHHHHTTC----EEEEESS--HHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTT
T ss_pred CCCeEEEEcC--CHHHHHHHHHHHHHCCe----EEEEeCC--HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhc
Confidence 3567777765 45566667777766543 3443333 222333333 3578777543 34567888888875
Q ss_pred ---CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 ---GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 ---G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +..... +.+... ......+++..|.+.+.|..+|.
T Consensus 78 ~~~~~pii~~s~~~~~-~~~~~~---------~~~g~~~~l~kp~~~~~l~~~i~ 122 (142)
T 3cg4_A 78 LEQGIAIVMLTAKNAP-DAKMIG---------LQEYVVDYITKPFDNEDLIEKTT 122 (142)
T ss_dssp CCTTEEEEEEECTTCC-CCSSTT---------GGGGEEEEEESSCCHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCH-HHHHHH---------HhcCccEEEeCCCCHHHHHHHHH
Confidence 456665 433322 222111 11126799999999999998887
No 98
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=45.21 E-value=1.1e+02 Score=35.43 Aligned_cols=101 Identities=9% Similarity=-0.019 Sum_probs=71.9
Q ss_pred EEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecC-----------CChhhHHHHHHHHHHhCCCCCCcEEEEccCChH
Q 046057 965 VGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSA-----------PDPRIQNDFVNLANELHSSHADRARLCLTYDEP 1033 (1198)
Q Consensus 965 Ig~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsg-----------pdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~ 1033 (1198)
++++|-.... ..+.+++.+..+.+-|+.+|..|.- ...+....|.+.++++|+ ..++-.++..
T Consensus 144 ~~Iigpcsve-s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl-----~~~te~~d~~ 217 (385)
T 3nvt_A 144 VFVFGPCSVE-SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGL-----GVISEIVTPA 217 (385)
T ss_dssp EEEEECSBCC-CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTC-----EEEEECCSGG
T ss_pred EEEEEeCCcC-CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCC-----EEEEecCCHH
Confidence 5667766554 7888888888887788888877752 122345678888888988 3556667777
Q ss_pred HHHHHHHHccEEEEcCCC-CCCcHHHHH-HHHhCCcEEEeCC
Q 046057 1034 LSHLIYAGADFILVPSIF-EPCGLTQLV-AMRYGSIPVVRKT 1073 (1198)
Q Consensus 1034 ~l~~iyA~ADi~LvPS~~-EpfGLt~LE-AMa~G~PvIvt~t 1073 (1198)
.+..+..-+|++=+||.- ..+ .+++ +...|+||+.+.-
T Consensus 218 ~~~~l~~~vd~lkIgs~~~~n~--~LL~~~a~~gkPVilk~G 257 (385)
T 3nvt_A 218 DIEVALDYVDVIQIGARNMQNF--ELLKAAGRVDKPILLKRG 257 (385)
T ss_dssp GHHHHTTTCSEEEECGGGTTCH--HHHHHHHTSSSCEEEECC
T ss_pred HHHHHHhhCCEEEECcccccCH--HHHHHHHccCCcEEEecC
Confidence 777776779999999973 444 4443 5568999998653
No 99
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=45.05 E-value=1.8e+02 Score=26.55 Aligned_cols=108 Identities=12% Similarity=0.024 Sum_probs=62.9
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH--HHccEEEEcCC-CCCCcHHHHHHHHh---
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY--AGADFILVPSI-FEPCGLTQLVAMRY--- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy--A~ADi~LvPS~-~EpfGLt~LEAMa~--- 1064 (1198)
..+++|+.+ ++.....+..+..+.|. .+..+... ......+ ...|++++-.. .+.-|+.+++.++.
T Consensus 6 ~~~iLivdd--~~~~~~~l~~~l~~~g~----~v~~~~~~--~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~ 77 (140)
T 3grc_A 6 RPRILICED--DPDIARLLNLMLEKGGF----DSDMVHSA--AQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSR 77 (140)
T ss_dssp CSEEEEECS--CHHHHHHHHHHHHHTTC----EEEEECSH--HHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGG
T ss_pred CCCEEEEcC--CHHHHHHHHHHHHHCCC----eEEEECCH--HHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcc
Confidence 356777765 45556667776666543 34443332 2222233 34588877543 35678888888875
Q ss_pred --CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 --GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 --G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +......+.... .......+|+..|.+.+.|..+|.
T Consensus 78 ~~~~~ii~~s~~~~~~~~~~~---------~~~~g~~~~l~kP~~~~~l~~~i~ 122 (140)
T 3grc_A 78 TRDLAIVVVSANAREGELEFN---------SQPLAVSTWLEKPIDENLLILSLH 122 (140)
T ss_dssp GTTCEEEEECTTHHHHHHHHC---------CTTTCCCEEECSSCCHHHHHHHHH
T ss_pred cCCCCEEEEecCCChHHHHHH---------hhhcCCCEEEeCCCCHHHHHHHHH
Confidence 667776 332221111101 112237899999999999998887
No 100
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=41.16 E-value=76 Score=38.76 Aligned_cols=90 Identities=11% Similarity=0.299 Sum_probs=56.7
Q ss_pred CCCCCcEEEEEEeCCCCCCCCCCceEEEEEe---CCCCCCccceeeecccc-CCCCCeEEEEEEecCCc-eEEEEEEecC
Q 046057 446 EFKGEDLVRLYYNKQSSSLAHAKELWIHGGY---NNWKDGLSIVARLVSSE-RTDGDWWYAKVSVPDQA-LVLDWVFADG 520 (1198)
Q Consensus 446 ~~~aG~~V~v~YN~~~g~L~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~-~~~g~ww~atV~VP~~A-~~ldFvFsD~ 520 (1198)
+...+.+|.|.++-.. .+.-.++|+|-|.. .+|..... .+|.... ...|..|.++|.+|.+. ...-||-.|+
T Consensus 490 ~c~~~~~v~v~F~v~~-~t~~Ge~l~vvGs~~~LG~W~~~~a--~~L~~~~~t~~~~~W~~~v~lp~~~~~eYKyvv~~~ 566 (599)
T 2vn4_A 490 PCATPTSVAVTFHELV-STQFGQTVKVAGNAAALGNWSTSAA--VALDAVNYADNHPLWIGTVNLEAGDVVEYKYINVGQ 566 (599)
T ss_dssp CCCCCSEEEEEEEEEC-CCCTTCEEEEEESSGGGTTTCTTTS--EECBCTTCBTTBCEEEEEEEEETTCEEEEEEEEECT
T ss_pred cccCCCeEEEEEEEeE-EcCCCCEEEEEecccCCCCcChhhe--eecccccCCCCCCcEEEEEEcCCCCcEEEEEEEECC
Confidence 3344567888888665 46778899999988 58985543 2444333 12256799999999863 3344455554
Q ss_pred CCCCCccccCCCCcceEEEecC
Q 046057 521 PPGKAIVYDNNSRQDFHAIVPK 542 (1198)
Q Consensus 521 ~~~~~~~wDNN~g~dyh~~V~~ 542 (1198)
. +...|.+...+-+ .++.
T Consensus 567 ~--g~~~WE~g~NR~~--~~p~ 584 (599)
T 2vn4_A 567 D--GSVTWESDPNHTY--TVPA 584 (599)
T ss_dssp T--CCEEECCSSCEEE--ECCC
T ss_pred C--CceEeCCCCCEEE--ecCc
Confidence 2 2356887554444 4543
No 101
>2j44_A SPNDX, alkaline amylopullulanase; virulence, glycogen binding, carbohydrate-binding module; HET: GLC; 2.1A {Streptococcus pneumoniae} SCOP: b.3.1.3 b.3.1.3
Probab=41.00 E-value=3.5e+02 Score=28.68 Aligned_cols=178 Identities=16% Similarity=0.231 Sum_probs=93.4
Q ss_pred eEEEEEccc-CCCCCCCCcEEEE-eec-----CCccccccceecccccCCCCe-EEEEEEecCC-ceeEeEEEEcCCccc
Q 046057 277 DIEVFLNRS-LSTLKNEPDVLIM-GAF-----NDWRWKSFTFRLNKTHLKGDW-WSCQVHVPKE-AFKIDFVFFNGQNIY 347 (1198)
Q Consensus 277 ~v~v~yN~~-l~~L~~~~~v~ih-~Gf-----N~W~~~~~~~~~~~t~~~~dW-w~~~v~VP~~-A~~lnFvF~dg~~~w 347 (1198)
.++|-|.|+ .+.. ...-|| ||= -+|-... ..+..++. .++ -.++|.+.+. |..+.|+..++..
T Consensus 3 ~~~vHY~r~~dg~y---~~wgL~~W~d~~~~s~~wp~~~--~~f~~~g~-D~yG~y~~V~l~~g~~~~v~fiv~~~d~-- 74 (217)
T 2j44_A 3 YFRIHVKKLPEENK---DAQGLWTWDDVEKPSENWPNGA--LSFKDAKK-DDYGYYLDVKLKGEQAKKISFLINNTAG-- 74 (217)
T ss_dssp EEEEEESSCSSSCG---GGEEEEEEESBSSCCCSTTTTS--EEGGGCEE-CSSSEEEEEEBCCSSCCEEEEEEEESSC--
T ss_pred eEEEEEEeCCCCCc---ccceEEEecCCCCccccCCccc--ccCccCCc-cCceeEEEEEcCCCCcceEEEEEeCCCC--
Confidence 578899983 4332 346666 441 1453321 22221211 111 3444555456 8999999998743
Q ss_pred ccCCCCceEEEEcCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 046057 348 ENNDQKDFCIAVEGLMDALAFEDFLLEEKRREQEKLAKEKAEQERQEEERRRIEAEHAAIEADRAQARVETERKREMLRE 427 (1198)
Q Consensus 348 DNN~g~d~~~~V~~g~~~~~~~~~~~ee~r~~~e~la~e~aer~~~~~e~rr~~~~~aa~~a~~a~A~~~~~~~~~~~~~ 427 (1198)
++-+.|=++.+..+..-+.|..
T Consensus 75 -~~~~~D~~i~~~~~~~~EvWi~--------------------------------------------------------- 96 (217)
T 2j44_A 75 -KNLTGDKSVEKLVPKMNEAWLD--------------------------------------------------------- 96 (217)
T ss_dssp -CBCSCCEEEECSSTTCCEEEEC---------------------------------------------------------
T ss_pred -ccCCCccEEEecCCCcceEEEe---------------------------------------------------------
Confidence 3457799998865433333222
Q ss_pred HHHHhhccCCcEEEecCCCCCCCcEEEEEEeCCCCCCCCCCceEEEEEe-----CCCCCCccceeeeccccCCCCCeEEE
Q 046057 428 LKKKAARSVDNVWYIEPSEFKGEDLVRLYYNKQSSSLAHAKELWIHGGY-----NNWKDGLSIVARLVSSERTDGDWWYA 502 (1198)
Q Consensus 428 ~~~~a~~~~~~v~~~~P~~~~aG~~V~v~YN~~~g~L~ga~~I~lh~G~-----N~W~~~~~~~~~l~~~~~~~g~ww~a 502 (1198)
+...+ |+.| |.+-.+|+|+|+|..|.-.+ =.+|+=.+- ++|..+..+ ...+.-| =++
T Consensus 97 -------~g~~~-~~~~--P~~~~~v~IhY~R~Dg~Y~~-w~Lw~W~d~~~~~~~~W~~~~~f-----t~~D~yG--ay~ 158 (217)
T 2j44_A 97 -------QDYKV-FSYE--PQPAGTVRVNYYRTDGNYDK-KSLWYWGDVKNPSSAQWPDGTDF-----TATGKYG--RYI 158 (217)
T ss_dssp -------TTCCE-ESSC--CCCSSEEEEEEECSSSCCTT-EEEEEESSCSSCCCSSTTCCEEC-----CEEETTE--EEE
T ss_pred -------CCCcc-cccc--cccCceEEEEEeCCCCCCCC-ceEEEcCCCCCccccCCCCCCCc-----CccCCce--eEE
Confidence 12233 3322 24556799999988766431 133331110 034432211 1112224 335
Q ss_pred EEEecCCceEEEEEEecCCCCCCccccCCCCcceEEEecC
Q 046057 503 KVSVPDQALVLDWVFADGPPGKAIVYDNNSRQDFHAIVPK 542 (1198)
Q Consensus 503 tV~VP~~A~~ldFvFsD~~~~~~~~wDNN~g~dyh~~V~~ 542 (1198)
+|.++..+..|+|...++.. ..++. .+.||++....
T Consensus 159 ~vpl~~~~~~i~fIv~~g~~---~~~k~-~~~D~~f~~~~ 194 (217)
T 2j44_A 159 DIPLNEAAREFGFLLLDESK---GDVKI-RKENYKFTDLK 194 (217)
T ss_dssp EEECCTTCCCEEEEEEETTS---SSTTS-SSSCEEECCSS
T ss_pred EEECCCCCceeEEEEEeCCc---ccccC-CCCceeEecCC
Confidence 67777888999999999841 01332 35578877553
No 102
>2dvz_A BUGE, putative exported protein; periplamsic binding proteins, carboxylate binding, glutamate, transport protein; HET: GLU; 2.30A {Bordetella pertussis}
Probab=40.72 E-value=3.6e+02 Score=29.82 Aligned_cols=156 Identities=8% Similarity=-0.109 Sum_probs=84.8
Q ss_pred cEEEEEecCCCccCHHHHHHHHHHhhcC-CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH-
Q 046057 963 PLVGIITRLTHQKGIHLIKHAIWRTLDR-GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA- 1040 (1198)
Q Consensus 963 plIg~VGRL~~qKGidlIleAl~~ll~~-~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA- 1040 (1198)
+.++++..=.+.|.+..|+.+++.- + .+.+-..|.|... .-..+.+.+..|++. ..|-+- +.. +.+..++.
T Consensus 116 ~~~lvv~~ds~~~tl~dL~~~ak~~--p~~~~~g~~g~Gs~~--hl~~~~l~~~~Gi~~-~~Vpy~-G~~-~a~~al~~G 188 (314)
T 2dvz_A 116 ANVVAVNPKFPAKDFKGFLEELKKN--PGKYSYGSSGTCGVL--HLMGESFKMATGTDI-VHVPYK-GSG-PAVADAVGG 188 (314)
T ss_dssp CEEEEECTTSSCSSHHHHHHHHHTS--TTTCEEEESCTTSHH--HHHHHHHHHHHTCCC-EEEECS-SHH-HHHHHHHHT
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhC--CCcEEEeCCCCCcHH--HHHHHHHHHHhCCCe-EEcccC-CHH-HHHHHHHcC
Confidence 4677776667888888888766431 2 2333333323211 223345666778741 233322 222 33444444
Q ss_pred HccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCC-----cccccc---ccccccchhhhhccCCCCcEEEEcCCCHHHHHH
Q 046057 1041 GADFILVPSIFEPCGLTQLVAMRYGSIPVVRKT-----GGLYDT---VFDVDHDKERAQALDLEPNGFSFDGADIAGVDY 1112 (1198)
Q Consensus 1041 ~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~t-----GGl~E~---V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~ 1112 (1198)
..|+++... -+.++.+..|..-+..-+ ..++|+ .+.+-++- .-....|+.++.+-++++.+
T Consensus 189 ~vD~~~~~~------~~~~~~i~~g~lr~Lav~~~~r~~~~pdvPt~~e~G~~~~-----~~~~w~gl~ap~g~p~~vv~ 257 (314)
T 2dvz_A 189 QIELIFDNL------PSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVL-----NQPVWYGLLAPKGTPMDVVN 257 (314)
T ss_dssp SSSEEEEEH------HHHHHHHHTTSSEEEEEESSSCCGGGTTSCBTTTTTCGGG-----CCCEEEEEEEETTCCHHHHH
T ss_pred CceEEEEcH------HHHHHHHHcCCEEEEEecCccccccCCCCCCHHhcCCCce-----EEeEEEEEEEcCCCCHHHHH
Confidence 588887653 245566677765332111 111111 00000000 00113688888888899999
Q ss_pred HHhhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHHH
Q 046057 1113 ALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVM 1176 (1198)
Q Consensus 1113 AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~am 1176 (1198)
.|+ +++.....++++...+.+.++
T Consensus 258 ~l~----------------------------------------~al~~~~~~p~~~~~~~~~g~ 281 (314)
T 2dvz_A 258 KLR----------------------------------------DAAVVALKDPKVIKALDDQGS 281 (314)
T ss_dssp HHH----------------------------------------HHHHHHHTCHHHHHHHHHHTE
T ss_pred HHH----------------------------------------HHHHHHHcCHHHHHHHHHCCC
Confidence 998 888888899999777766663
No 103
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=37.54 E-value=1.7e+02 Score=25.39 Aligned_cols=103 Identities=11% Similarity=-0.019 Sum_probs=59.3
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHH-----
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMR----- 1063 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa----- 1063 (1198)
.+++++.+ ++.....+..+....|. ++..... .......+. ..|++++-.. .+.-|+.+++.++
T Consensus 2 ~~iliv~~--~~~~~~~l~~~l~~~g~----~v~~~~~--~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~ 73 (119)
T 2j48_A 2 GHILLLEE--EDEAATVVCEMLTAAGF----KVIWLVD--GSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQAD 73 (119)
T ss_dssp CEEEEECC--CHHHHHHHHHHHHHTTC----EEEEESC--HHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCC
T ss_pred CEEEEEeC--CHHHHHHHHHHHHhCCc----EEEEecC--HHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcccc
Confidence 35666765 44556666666665543 3544333 222222222 4688777543 3456788888876
Q ss_pred hCCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1064 YGSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1064 ~G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
..+|+|+ +...........+ ..+++..|.+.+.|..+|.
T Consensus 74 ~~~~ii~~~~~~~~~~~~~~g-------------~~~~l~kp~~~~~l~~~l~ 113 (119)
T 2j48_A 74 PHPPLVLFLGEPPVDPLLTAQ-------------ASAILSKPLDPQLLLTTLQ 113 (119)
T ss_dssp SSCCCEEEESSCCSSHHHHHH-------------CSEECSSCSTTHHHHHHHH
T ss_pred CCCCEEEEeCCCCchhhhhcC-------------HHHhccCCCCHHHHHHHHH
Confidence 3566665 4333222111111 5688889999999998887
No 104
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=37.01 E-value=26 Score=32.79 Aligned_cols=32 Identities=22% Similarity=0.364 Sum_probs=24.1
Q ss_pred CcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEee
Q 046057 709 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILP 751 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP 751 (1198)
.|||+++. .+.+-..+++.|.+.||+|.++..
T Consensus 4 ~m~i~IiG-----------~G~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAG-----------IGRVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEEC-----------CSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEC-----------CCHHHHHHHHHHHhCCCeEEEEEC
Confidence 58998772 245566788899999999998864
No 105
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=36.50 E-value=2.4e+02 Score=25.48 Aligned_cols=108 Identities=11% Similarity=0.032 Sum_probs=64.3
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHHh----
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMRY---- 1064 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa~---- 1064 (1198)
.+++|+.+ ++.....+..+.++.|. ..+....... +.+..+.. ..|++++=-. -+.-|+.+++.++.
T Consensus 6 ~~iLivdd--~~~~~~~l~~~L~~~g~---~~v~~~~~~~-~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~ 79 (129)
T 3h1g_A 6 MKLLVVDD--SSTMRRIIKNTLSRLGY---EDVLEAEHGV-EAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRF 79 (129)
T ss_dssp CCEEEECS--CHHHHHHHHHHHHHTTC---CCEEEESSHH-HHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTC
T ss_pred cEEEEEeC--CHHHHHHHHHHHHHcCC---cEEEEeCCHH-HHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCC
Confidence 46677765 55667778787777654 2344333222 22222322 4688876433 35568888888874
Q ss_pred -CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 -GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 -G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ |.......... +.. ....+|+..|.+++.|..+|.
T Consensus 80 ~~~pii~~s~~~~~~~~~~--------~~~--~g~~~~l~KP~~~~~L~~~l~ 122 (129)
T 3h1g_A 80 KEIPIIMITAEGGKAEVIT--------ALK--AGVNNYIVKPFTPQVLKEKLE 122 (129)
T ss_dssp TTCCEEEEESCCSHHHHHH--------HHH--HTCCEEEESCCCHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHHH--------HHH--cCccEEEeCCCCHHHHHHHHH
Confidence 467766 44332221111 111 227899999999999999888
No 106
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=36.18 E-value=2.7e+02 Score=25.92 Aligned_cols=109 Identities=12% Similarity=0.060 Sum_probs=66.4
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH-----------HHccEEEEcCC-CCCCcHHH
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY-----------AGADFILVPSI-FEPCGLTQ 1058 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy-----------A~ADi~LvPS~-~EpfGLt~ 1058 (1198)
..+++|+.+ ++.....+..+..+.+.. ..|..... .......+ ...|++++=.. -+.-|+.+
T Consensus 4 ~~~ILivdd--d~~~~~~l~~~L~~~g~~--~~v~~~~~--~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~ 77 (152)
T 3heb_A 4 SVTIVMIED--DLGHARLIEKNIRRAGVN--NEIIAFTD--GTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDI 77 (152)
T ss_dssp -CEEEEECC--CHHHHHHHHHHHHHTTCC--CCEEEESS--HHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHH
T ss_pred CceEEEEeC--CHHHHHHHHHHHHhCCCc--ceEEEeCC--HHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHH
Confidence 356777776 556677788887776641 24554433 22333333 24688887533 35678888
Q ss_pred HHHHHh-----CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1059 LVAMRY-----GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1059 LEAMa~-----G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
++.++. .+|+|+ +.... .+.+.. +. .....+|+..|.+++.|..+|.
T Consensus 78 ~~~lr~~~~~~~~pii~~t~~~~-~~~~~~-------~~--~~g~~~~l~KP~~~~~l~~~i~ 130 (152)
T 3heb_A 78 LKLVKENPHTRRSPVVILTTTDD-QREIQR-------CY--DLGANVYITKPVNYENFANAIR 130 (152)
T ss_dssp HHHHHHSTTTTTSCEEEEESCCC-HHHHHH-------HH--HTTCSEEEECCSSHHHHHHHHH
T ss_pred HHHHHhcccccCCCEEEEecCCC-HHHHHH-------HH--HCCCcEEEeCCCCHHHHHHHHH
Confidence 888876 566766 43322 222211 11 1237899999999999998888
No 107
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=36.03 E-value=2.4e+02 Score=25.58 Aligned_cols=108 Identities=10% Similarity=0.061 Sum_probs=64.1
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH-HH-ccEEEEcCC-CCCCcHHHHHHHHhC--
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY-AG-ADFILVPSI-FEPCGLTQLVAMRYG-- 1065 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy-A~-ADi~LvPS~-~EpfGLt~LEAMa~G-- 1065 (1198)
..+++|+.+ ++.....+..+..+.|. .+.......+.. ..+. .. .|++++-.. .+.-|+.+++.++.-
T Consensus 7 ~~~ilivdd--~~~~~~~l~~~L~~~g~----~v~~~~~~~~a~-~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~ 79 (136)
T 3hdv_A 7 RPLVLVVDD--NAVNREALILYLKSRGI----DAVGADGAEEAR-LYLHYQKRIGLMITDLRMQPESGLDLIRTIRASER 79 (136)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHHTTC----CEEEESSHHHHH-HHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTT
T ss_pred CCeEEEECC--CHHHHHHHHHHHHHcCc----eEEEeCCHHHHH-HHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCC
Confidence 457777776 55566777777776653 354433322222 2222 22 678777543 456788888888753
Q ss_pred --CcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1066 --SIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1066 --~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
+|+|+ +..... +.+. ++. .....+|+..|.+.+.|..+|.
T Consensus 80 ~~~~ii~~s~~~~~-~~~~-------~~~--~~g~~~~l~KP~~~~~l~~~i~ 122 (136)
T 3hdv_A 80 AALSIIVVSGDTDV-EEAV-------DVM--HLGVVDFLLKPVDLGKLLELVN 122 (136)
T ss_dssp TTCEEEEEESSCCH-HHHH-------HHH--HTTCSEEEESSCCHHHHHHHHH
T ss_pred CCCCEEEEeCCCCh-HHHH-------HHH--hCCcceEEeCCCCHHHHHHHHH
Confidence 56665 333221 1111 111 1237899999999999999998
No 108
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=35.84 E-value=42 Score=37.14 Aligned_cols=40 Identities=23% Similarity=0.265 Sum_probs=28.3
Q ss_pred CCCcEEEEEccccCCCCCCCcH-HHHHHHHHHHHHhCCCeEEEEe
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGL-GDVVTSLSRTVQDLNHNVDIIL 750 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl-~~vV~~LarAL~~~GH~V~VIt 750 (1198)
-.+||||+|... |. .++. ..+.....++|++.||+|+++-
T Consensus 20 m~~MKiLII~aH--P~--~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAH--PE--PRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeC--CC--CccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 357999999764 53 3444 4455667788999999999984
No 109
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=35.72 E-value=4.8e+02 Score=33.78 Aligned_cols=89 Identities=16% Similarity=0.121 Sum_probs=53.2
Q ss_pred cCCCCCeEEEEEccc-CCCCCCCCcEEEE-ee-cC----Cccccccceec---ccccCCCCeEEEEEEecCC-ceeEeEE
Q 046057 271 VVKPDQDIEVFLNRS-LSTLKNEPDVLIM-GA-FN----DWRWKSFTFRL---NKTHLKGDWWSCQVHVPKE-AFKIDFV 339 (1198)
Q Consensus 271 ~~~aG~~v~v~yN~~-l~~L~~~~~v~ih-~G-fN----~W~~~~~~~~~---~~t~~~~dWw~~~v~VP~~-A~~lnFv 339 (1198)
.+.|...++|-|.+. .+.. .+.-++ || .. +|-.+. ..+ .+...| -.++|.++++ +..+.|+
T Consensus 2 ~~~~~~~~~vhy~~~~~~~~---~~~gl~~w~d~~~~~~~w~~~~--~~f~~~~~d~yG---~~~~v~~~~~~~~~~~~~ 73 (1014)
T 2ya1_A 2 HMASDNYFRIHVKKLPEENK---DAQGLWTWDDVEKPSENWPNGA--LSFKDAKKDDYG---YYLDVKLKGEQAKKISFL 73 (1014)
T ss_dssp GGGCTTEEEEEESSCSSSCG---GGEEEEEEESBSSCCCSTTTTS--EEGGGCEECSSC---EEEEEEBC-CCCCEEEEE
T ss_pred CCCCCceEEEEEeeCCCCCc---cCceEEEecCCCCcccCCCccc--ccCcccCccCce---eEEEEEcCCCCcceEEEE
Confidence 467889999999984 3332 234444 43 11 343321 222 222223 6778888645 8999999
Q ss_pred EEcCCcccccCCCCceEEEEcCCccHHHHHH
Q 046057 340 FFNGQNIYENNDQKDFCIAVEGLMDALAFED 370 (1198)
Q Consensus 340 F~dg~~~wDNN~g~d~~~~V~~g~~~~~~~~ 370 (1198)
+.++ .|+ |-+.|-++.+..+-+-+.|.+
T Consensus 74 i~~~--~~~-~~~~d~~~~~~~~~~~evw~~ 101 (1014)
T 2ya1_A 74 INNT--AGK-NLTGDKSVEKLVPKMNEAWLD 101 (1014)
T ss_dssp EEET--TCC-BSSCCEEEECSSTTCCEEEEC
T ss_pred EecC--CCc-ccCCcceEeecCcccceEEEe
Confidence 9987 354 457899998865444444433
No 110
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=35.29 E-value=2.3e+02 Score=25.83 Aligned_cols=109 Identities=10% Similarity=0.072 Sum_probs=64.9
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH------------HccEEEEcCCC-CCCcHH
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA------------GADFILVPSIF-EPCGLT 1057 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA------------~ADi~LvPS~~-EpfGLt 1057 (1198)
..+++|+.+ ++.....+..+..+.+. ...+..+.... .....+. ..|++++=... +.-|+.
T Consensus 6 ~~~iLivdd--~~~~~~~l~~~L~~~g~--~~~v~~~~~~~--~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~ 79 (149)
T 1k66_A 6 TQPLLVVED--SDEDFSTFQRLLQREGV--VNPIYRCITGD--QALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGRE 79 (149)
T ss_dssp TSCEEEECC--CHHHHHHHHHHHHHTTB--CSCEEEECSHH--HHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHH
T ss_pred CccEEEEEC--CHHHHHHHHHHHHHcCC--CceEEEECCHH--HHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHH
Confidence 456777765 55566777777776653 12455444332 2333343 46888875443 456788
Q ss_pred HHHHHH-----hCCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1058 QLVAMR-----YGSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1058 ~LEAMa-----~G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
+++.++ ..+|+|+ +.... .+.+.. + ......+|+..|.+.+.|..+|.
T Consensus 80 ~~~~l~~~~~~~~~~ii~~t~~~~-~~~~~~-------~--~~~g~~~~l~kP~~~~~l~~~i~ 133 (149)
T 1k66_A 80 VLQEIKQDEVLKKIPVVIMTTSSN-PKDIEI-------C--YSYSISSYIVKPLEIDRLTETVQ 133 (149)
T ss_dssp HHHHHTTSTTGGGSCEEEEESCCC-HHHHHH-------H--HHTTCSEEEECCSSHHHHHHHHH
T ss_pred HHHHHHhCcccCCCeEEEEeCCCC-HHHHHH-------H--HHCCCCEEEeCCCCHHHHHHHHH
Confidence 888876 3567766 43322 222111 1 11237899999999999998888
No 111
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=35.12 E-value=2.6e+02 Score=25.39 Aligned_cols=108 Identities=6% Similarity=0.078 Sum_probs=62.9
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHH-hCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCCC-CCCcHHHHHHHHh--
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANE-LHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSIF-EPCGLTQLVAMRY-- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~e-Lgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~~-EpfGLt~LEAMa~-- 1064 (1198)
..+++|+.+ ++.....+..+..+ .+. ..+..+....+ ....+. ..|++++-... +.-|+.+++.++.
T Consensus 8 ~~~iLivdd--~~~~~~~l~~~L~~~~~~---~~v~~~~~~~~--a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~ 80 (143)
T 3cnb_A 8 DFSILIIED--DKEFADMLTQFLENLFPY---AKIKIAYNPFD--AGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTP 80 (143)
T ss_dssp -CEEEEECS--CHHHHHHHHHHHHHHCTT---CEEEEECSHHH--HHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTST
T ss_pred CceEEEEEC--CHHHHHHHHHHHHhccCc---cEEEEECCHHH--HHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCc
Confidence 467777766 55566677777766 443 11444433322 223332 46888875443 4567888888775
Q ss_pred ---CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 ---GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 ---G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +...... .+. ++ ......+++..|.+++.|..+|.
T Consensus 81 ~~~~~~ii~~s~~~~~~-~~~-------~~--~~~g~~~~l~kP~~~~~l~~~i~ 125 (143)
T 3cnb_A 81 ATANIIVIAMTGALTDD-NVS-------RI--VALGAETCFGKPLNFTLLEKTIK 125 (143)
T ss_dssp TTTTSEEEEEESSCCHH-HHH-------HH--HHTTCSEEEESSCCHHHHHHHHH
T ss_pred cccCCcEEEEeCCCCHH-HHH-------HH--HhcCCcEEEeCCCCHHHHHHHHH
Confidence 456665 4332221 111 11 11237899999999999998887
No 112
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=35.11 E-value=1.5e+02 Score=28.11 Aligned_cols=107 Identities=8% Similarity=0.070 Sum_probs=62.9
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHHh---
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMRY--- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa~--- 1064 (1198)
..+++|+.+ ++.....+..+..+.|. .|.... +.......+. ..|++++-.. .+.-|+.+++.++.
T Consensus 7 ~~~ILivdd--~~~~~~~l~~~L~~~g~----~v~~~~--~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~ 78 (154)
T 3gt7_A 7 AGEILIVED--SPTQAEHLKHILEETGY----QTEHVR--NGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPD 78 (154)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHTTTC----EEEEES--SHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTT
T ss_pred CCcEEEEeC--CHHHHHHHHHHHHHCCC----EEEEeC--CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCC
Confidence 467777766 45556666766665442 343332 3333333333 3588877543 35568888888764
Q ss_pred --CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 --GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 --G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +.... .+.+.. +... ...+|+..|.+++.|..+|.
T Consensus 79 ~~~~pii~~s~~~~-~~~~~~-------~~~~--g~~~~l~KP~~~~~l~~~i~ 122 (154)
T 3gt7_A 79 LRTIPVILLTILSD-PRDVVR-------SLEC--GADDFITKPCKDVVLASHVK 122 (154)
T ss_dssp TTTSCEEEEECCCS-HHHHHH-------HHHH--CCSEEEESSCCHHHHHHHHH
T ss_pred cCCCCEEEEECCCC-hHHHHH-------HHHC--CCCEEEeCCCCHHHHHHHHH
Confidence 567766 43322 222111 1111 26899999999999998888
No 113
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=34.84 E-value=14 Score=43.59 Aligned_cols=63 Identities=19% Similarity=0.186 Sum_probs=41.9
Q ss_pred HHHHHHHHHhCCCCCCcEEEEccC-ChHHHH-HHHHHccEEEEcCCC-CCCcHHHHHHHHhCCcEEEeCC
Q 046057 1007 NDFVNLANELHSSHADRARLCLTY-DEPLSH-LIYAGADFILVPSIF-EPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1007 ~~L~~la~eLgl~~~drV~f~g~~-d~~~l~-~iyA~ADi~LvPS~~-EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
+..+.++++| ++-+.++|.- +++.+. .=+..+|+++...-. |..=++.+-|-.+|++-+++.+
T Consensus 268 ~r~~~la~~l----~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~v 333 (461)
T 4g65_A 268 QRAEKLSEEL----ENTIVFCGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLI 333 (461)
T ss_dssp HHHHHHHHHC----TTSEEEESCTTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHC----CCceEEeccccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccc
Confidence 4566666655 3456677765 444333 236789998876553 6666888999999998887543
No 114
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=34.39 E-value=53 Score=32.12 Aligned_cols=54 Identities=15% Similarity=0.139 Sum_probs=39.4
Q ss_pred ceEEEEEcCCCCCCCCCceeEEecc---cccccccCCCCCCcceeec---CCcceeEEEeecCCC
Q 046057 613 TTVTVFYNPANTVLNGKSEIWFRCS---FNHWTHRMGILPPQKMVPV---KYSTHVKTTVKVPLD 671 (1198)
Q Consensus 613 ~~~~~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~ 671 (1198)
.+|.|.++-..+. ...+.||+.|+ ++.|....+ ..|.+. +....+++++.+|.+
T Consensus 7 ~~v~V~F~v~~~~-~~ge~v~vvGs~~~LG~W~p~~a----v~L~~~~~~~~~~~W~~~v~lp~~ 66 (131)
T 2z0b_A 7 GPSQVAFEIRGTL-LPGEVFAICGSCDALGNWNPQNA----VALLPENDTGESMLWKATIVLSRG 66 (131)
T ss_dssp CCEEEEEEEECCC-CTTCEEEEEESSGGGTTTCGGGC----EECEECCTTCCSSEEEEEEEECTT
T ss_pred CeEEEEEEEeeec-CCCCEEEEEeCCCcCCCCCcccc----ccccccccCCCCCeEEEEEEcCCC
Confidence 4456666555543 56689999999 899988765 467766 256678999999987
No 115
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=34.23 E-value=2.5e+02 Score=25.03 Aligned_cols=108 Identities=14% Similarity=0.095 Sum_probs=61.6
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHHh---
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMRY--- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa~--- 1064 (1198)
..+++++.+ ++.....+..+..+.+. ..+..... .......+. ..|++++-.. .+.-|+.+++.++.
T Consensus 4 ~~~ilivdd--~~~~~~~l~~~l~~~~~---~~v~~~~~--~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~ 76 (128)
T 1jbe_A 4 ELKFLVVDD--FSTMRRIVRNLLKELGF---NNVEEAED--GVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXA 76 (128)
T ss_dssp TCCEEEECS--CHHHHHHHHHHHHHTTC---CCEEEESS--HHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--C
T ss_pred ccEEEEECC--CHHHHHHHHHHHHHcCC---cEEEeeCC--HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcc
Confidence 356677765 45556667777666543 13443332 222223332 3588877433 24467888888874
Q ss_pred --CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 --GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 --G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +..... +.+.. + ...+..+|+..|.+.+.|..+|.
T Consensus 77 ~~~~~ii~~s~~~~~-~~~~~-------~--~~~ga~~~l~KP~~~~~l~~~i~ 120 (128)
T 1jbe_A 77 MSALPVLMVTAEAKK-ENIIA-------A--AQAGASGYVVKPFTAATLEEKLN 120 (128)
T ss_dssp CTTCCEEEEESSCCH-HHHHH-------H--HHTTCSEEEESSCCHHHHHHHHH
T ss_pred cCCCcEEEEecCccH-HHHHH-------H--HHhCcCceeecCCCHHHHHHHHH
Confidence 456665 433222 21111 1 11236899999999999998887
No 116
>2qpq_A Protein BUG27; alpha/beta domain, venus flytrap, transport protein; HET: CIT; 1.92A {Bordetella pertussis}
Probab=33.74 E-value=4.4e+02 Score=28.85 Aligned_cols=157 Identities=12% Similarity=0.052 Sum_probs=82.5
Q ss_pred cEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH-H
Q 046057 963 PLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA-G 1041 (1198)
Q Consensus 963 plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA-~ 1041 (1198)
+.++++..=.+.|.+..|+.+++ .+..++-+...|......-..+.+.+..|++ ..+|-+- +.. +.+..++. .
T Consensus 103 ~~~lvv~~~s~~~sl~dL~~~ak---~~p~~~~~g~~g~Gs~~hl~~~~l~~~~G~~-~~~Vpy~-g~~-~a~~al~~G~ 176 (301)
T 2qpq_A 103 PSVFVVPAGSKYKTLGELMAAAK---QTNTQVTYGSCGNGTPQHLAGELLNVSAKTH-MVHVPYK-GCG-PALNDVLGSQ 176 (301)
T ss_dssp EEEEEEETTCSCCSHHHHHHHTC---SSSCCCEEEESSTTSHHHHHHHHHHHHHTCC-CEEEECS-SHH-HHHHHHHTTS
T ss_pred CeEEEEeCCCCCCCHHHHHHHHH---hCCCceEEecCCCCcHHHHHHHHHHHHhCCC-eEEeccC-ChH-HHHHHHHCCC
Confidence 45666666667888887776653 2223333322221111122334456667774 1233322 222 33444443 5
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCccccc-cccccccchhhhhccCC------CCcEEEEcCCCHHHHHHHH
Q 046057 1042 ADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYD-TVFDVDHDKERAQALDL------EPNGFSFDGADIAGVDYAL 1114 (1198)
Q Consensus 1042 ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E-~V~d~d~~~~~~~~~~~------~~nG~lf~~~D~~~La~AL 1114 (1198)
.|+++... -+.++.+..|..-+..-++.-+. .+.+. ......|. ...|+.++.+-++++.+.|
T Consensus 177 vD~~~~~~------~~~~~~i~~g~lr~Lav~~~~r~~~~pdv----Pt~~e~G~~~~~~~~w~gl~ap~g~p~~vv~~l 246 (301)
T 2qpq_A 177 IGLAVVTA------SSAIPFIKAGKLQALAVTSKERSALLPEV----PTVAEQGVAGYELNQWHGLLVPGATPMAVRQKL 246 (301)
T ss_dssp SSCEEEEH------HHHHHHHHTTSEEEEEECSSSCCTTCTTS----CBSGGGTCTTCCCEEEEEEEEETTCCHHHHHHH
T ss_pred ccEEEEcH------HHHHHHHhcCCeEEEEEcCCccccccCCC----CChHHhCCCceEEEeEEEEEecCCCCHHHHHHH
Confidence 88877652 24556667776433311111010 00000 00001111 1368888888888999999
Q ss_pred hhcccccccccccccccccccCCCCcccccccccccchhHHHHHHHHhcCHHHHHHHHHHH
Q 046057 1115 NSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTV 1175 (1198)
Q Consensus 1115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rAI~~l~~~~e~~~~L~~~a 1175 (1198)
+ +++.....++++...+.+.+
T Consensus 247 ~----------------------------------------~al~~~~~~~~~~~~~~~~g 267 (301)
T 2qpq_A 247 Y----------------------------------------DGIAKVMQRDDVQKKLADLG 267 (301)
T ss_dssp H----------------------------------------HHHHHHHTCHHHHHHHHHHT
T ss_pred H----------------------------------------HHHHHHHcCHHHHHHHHHCC
Confidence 8 88888889999877776665
No 117
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=33.57 E-value=2.7e+02 Score=25.06 Aligned_cols=108 Identities=13% Similarity=0.098 Sum_probs=63.7
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH---------HccEEEEcCCC-CCCcHHHHHH
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA---------GADFILVPSIF-EPCGLTQLVA 1061 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA---------~ADi~LvPS~~-EpfGLt~LEA 1061 (1198)
.+++|+.+ ++.....+..+..+.+. ...+..+.. .......+. ..|++++=... +..|+.+++.
T Consensus 3 ~~ilivdd--~~~~~~~l~~~L~~~~~--~~~v~~~~~--~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~ 76 (140)
T 1k68_A 3 KKIFLVED--NKADIRLIQEALANSTV--PHEVVTVRD--GMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAE 76 (140)
T ss_dssp CEEEEECC--CHHHHHHHHHHHHTCSS--CCEEEEECS--HHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHH
T ss_pred CeEEEEeC--CHHHHHHHHHHHHhcCC--CceEEEECC--HHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHH
Confidence 46677765 45566667777765543 114444333 333334443 47888875443 4567888887
Q ss_pred HHh-----CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1062 MRY-----GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1062 Ma~-----G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
++. .+|+|+ +.... .+.+.. + ......+++..|.+.+.|..+|.
T Consensus 77 l~~~~~~~~~pii~ls~~~~-~~~~~~-------~--~~~g~~~~l~kP~~~~~l~~~i~ 126 (140)
T 1k68_A 77 IKSDPTLKRIPVVVLSTSIN-EDDIFH-------S--YDLHVNCYITKSANLSQLFQIVK 126 (140)
T ss_dssp HHHSTTGGGSCEEEEESCCC-HHHHHH-------H--HHTTCSEEEECCSSHHHHHHHHH
T ss_pred HHcCcccccccEEEEecCCc-HHHHHH-------H--HHhchhheecCCCCHHHHHHHHH
Confidence 764 567776 43322 222111 1 12237899999999999998887
No 118
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=32.49 E-value=89 Score=33.00 Aligned_cols=129 Identities=12% Similarity=0.144 Sum_probs=69.2
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCC--eEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCe
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNH--NVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGL 787 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH--~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv 787 (1198)
|||+++.+ |.+.....+.++|.+.+| +|..|....+.. . . .......|+
T Consensus 2 ~rI~vl~S---------G~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~---~--~---------------~~~A~~~gI 52 (216)
T 2ywr_A 2 LKIGVLVS---------GRGSNLQAIIDAIESGKVNASIELVISDNPKA---Y--A---------------IERCKKHNV 52 (216)
T ss_dssp EEEEEEEC---------SCCHHHHHHHHHHHTTSSCEEEEEEEESCTTC---H--H---------------HHHHHHHTC
T ss_pred CEEEEEEe---------CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCh---H--H---------------HHHHHHcCC
Confidence 69998753 334678888899998888 554444321110 0 0 001233577
Q ss_pred EEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEe
Q 046057 788 SVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTI 867 (1198)
Q Consensus 788 ~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tI 867 (1198)
+++.+++.. + . + | .-|...+++.+.. .+||+|.+-.|..-+-+.++. .+ . --++.+
T Consensus 53 p~~~~~~~~-~-~---------~--r-~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~-~~------~-~~~iNi 108 (216)
T 2ywr_A 53 ECKVIQRKE-F-P---------S--K-KEFEERMALELKK--KGVELVVLAGFMRILSHNFLK-YF------P-NKVINI 108 (216)
T ss_dssp CEEECCGGG-S-S---------S--H-HHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHT-TS------T-TCEEEE
T ss_pred CEEEeCccc-c-c---------c--h-hhhhHHHHHHHHh--cCCCEEEEeCchhhCCHHHHh-hc------c-CCeEEE
Confidence 777665431 1 0 1 1 1233456677766 489999998775433333332 11 1 136777
Q ss_pred cCCc----hhhhHHHHHHhccCEEEEeC
Q 046057 868 HNLE----FGTHHIGKAMTYADKATTVS 891 (1198)
Q Consensus 868 Hn~~----~~~~li~~~~~~AD~VitVS 891 (1198)
|-.- .+.+-+.+++..-+..+.++
T Consensus 109 HpSLLP~yrG~~pi~~ai~~G~~~tGvT 136 (216)
T 2ywr_A 109 HPSLIPAFQGLHAQKQAVEFGVKFSGCT 136 (216)
T ss_dssp ESSCTTTTCSTTHHHHHHHHTCSEEEEE
T ss_pred cCCcCcCCCCccHHHHHHHcCCCeEEEE
Confidence 7643 23455566665555555443
No 119
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=32.39 E-value=2.9e+02 Score=25.21 Aligned_cols=106 Identities=11% Similarity=0.142 Sum_probs=62.8
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH----HccEEEEcCC-CCCCcHHHHHHHHh--
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA----GADFILVPSI-FEPCGLTQLVAMRY-- 1064 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA----~ADi~LvPS~-~EpfGLt~LEAMa~-- 1064 (1198)
.+++|+.+ ++.....+..+..+.+. .+..... .......+. ..|++++-.. .+.-|+.+++.++.
T Consensus 4 ~~ilivdd--~~~~~~~l~~~l~~~g~----~v~~~~~--~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~ 75 (143)
T 3jte_A 4 AKILVIDD--ESTILQNIKFLLEIDGN----EVLTASS--STEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKIT 75 (143)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTTC----EEEEESS--HHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHC
T ss_pred CEEEEEcC--CHHHHHHHHHHHHhCCc----eEEEeCC--HHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhC
Confidence 46777765 55566777777776542 3443333 223333343 5788887543 45567777777664
Q ss_pred -CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 -GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 -G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +..... +.+. ++. .....+|+..|.+.+.|..+|.
T Consensus 76 ~~~~ii~ls~~~~~-~~~~-------~~~--~~g~~~~l~kp~~~~~l~~~l~ 118 (143)
T 3jte_A 76 PHMAVIILTGHGDL-DNAI-------LAM--KEGAFEYLRKPVTAQDLSIAIN 118 (143)
T ss_dssp TTCEEEEEECTTCH-HHHH-------HHH--HTTCSEEEESSCCHHHHHHHHH
T ss_pred CCCeEEEEECCCCH-HHHH-------HHH--HhCcceeEeCCCCHHHHHHHHH
Confidence 566665 332221 1111 111 1227899999999999998887
No 120
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=32.38 E-value=40 Score=39.48 Aligned_cols=38 Identities=18% Similarity=0.282 Sum_probs=31.2
Q ss_pred CcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 709 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
++||+++.. | ..|--.-...|++.|+++||+|+++++.
T Consensus 8 ~~~vl~~p~---p---~~GHi~P~l~La~~L~~rG~~VT~v~t~ 45 (482)
T 2pq6_A 8 KPHVVMIPY---P---VQGHINPLFKLAKLLHLRGFHITFVNTE 45 (482)
T ss_dssp CCEEEEECC---S---SHHHHHHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CCEEEEecC---c---cchhHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 579999862 3 3577777889999999999999999865
No 121
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=31.99 E-value=2.4e+02 Score=30.66 Aligned_cols=101 Identities=11% Similarity=0.003 Sum_probs=68.7
Q ss_pred EEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCCC------------hhhHHHHHHHHHHhCCCCCCcEEEEccCCh
Q 046057 965 VGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPD------------PRIQNDFVNLANELHSSHADRARLCLTYDE 1032 (1198)
Q Consensus 965 Ig~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgpd------------p~i~~~L~~la~eLgl~~~drV~f~g~~d~ 1032 (1198)
+++.|- ...-..+..++.+..+.+-++.+|..+.- . .+....+.++++++|+ -.+.-.++.
T Consensus 25 ~vIAgp-c~~~~~e~a~~~a~~l~~~Ga~~vk~~~f-kprts~~~~~g~~~egl~~l~~~~~~~Gl-----~~~te~~d~ 97 (262)
T 1zco_A 25 TIIAGP-CSIESREQIMKVAEFLAEVGIKVLRGGAF-KPRTSPYSFQGYGEKALRWMREAADEYGL-----VTVTEVMDT 97 (262)
T ss_dssp EEEEEC-SBCCCHHHHHHHHHHHHHTTCCEEECBSS-CCCSSTTSCCCCTHHHHHHHHHHHHHHTC-----EEEEECCCG
T ss_pred EEEEeC-CCCCCHHHHHHHHHHHHHcCCCEEEEEec-ccCCCcccccCccHHHHHHHHHHHHHcCC-----cEEEeeCCH
Confidence 333444 77778999999988888888888877653 2 2334567888888887 345556676
Q ss_pred HHHHHHHHHccEEEEcCCCCCCcHHHHHH-HHhCCcEEEeCC
Q 046057 1033 PLSHLIYAGADFILVPSIFEPCGLTQLVA-MRYGSIPVVRKT 1073 (1198)
Q Consensus 1033 ~~l~~iyA~ADi~LvPS~~EpfGLt~LEA-Ma~G~PvIvt~t 1073 (1198)
..+..+..-+|++=++|+- ---..++++ ...|+|++.+.-
T Consensus 98 ~~~~~l~~~vd~~kIga~~-~~n~~ll~~~a~~~kPV~lk~G 138 (262)
T 1zco_A 98 RHVELVAKYSDILQIGARN-SQNFELLKEVGKVENPVLLKRG 138 (262)
T ss_dssp GGHHHHHHHCSEEEECGGG-TTCHHHHHHHTTSSSCEEEECC
T ss_pred HhHHHHHhhCCEEEECccc-ccCHHHHHHHHhcCCcEEEecC
Confidence 6666665559999999973 223433444 447999998543
No 122
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=31.09 E-value=3e+02 Score=24.91 Aligned_cols=107 Identities=10% Similarity=0.035 Sum_probs=62.2
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEE-EccCChHHHHHHH--HHccEEEEcCCC--CCCcHHHHHHHH--
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARL-CLTYDEPLSHLIY--AGADFILVPSIF--EPCGLTQLVAMR-- 1063 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f-~g~~d~~~l~~iy--A~ADi~LvPS~~--EpfGLt~LEAMa-- 1063 (1198)
..+++|+.+ ++.....+..+..+.|. .+.. +....+ ....+ ...|++++-... +.-|+.+++.++
T Consensus 9 ~~~iLivdd--~~~~~~~l~~~L~~~g~----~v~~~~~~~~~--a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~ 80 (140)
T 3cg0_A 9 LPGVLIVED--GRLAAATLRIQLESLGY----DVLGVFDNGEE--AVRCAPDLRPDIALVDIMLCGALDGVETAARLAAG 80 (140)
T ss_dssp CCEEEEECC--BHHHHHHHHHHHHHHTC----EEEEEESSHHH--HHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHH
T ss_pred CceEEEEEC--CHHHHHHHHHHHHHCCC----eeEEEECCHHH--HHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhC
Confidence 467777776 44556667777666553 3442 332222 22222 246888875443 346777777665
Q ss_pred hCCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1064 YGSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1064 ~G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
..+|+|+ +.... .+.+. +.......+|+..|.+.+.|..+|.
T Consensus 81 ~~~~ii~ls~~~~-~~~~~---------~~~~~g~~~~l~kp~~~~~l~~~i~ 123 (140)
T 3cg0_A 81 CNLPIIFITSSQD-VETFQ---------RAKRVNPFGYLAKPVAADTLHRSIE 123 (140)
T ss_dssp SCCCEEEEECCCC-HHHHH---------HHHTTCCSEEEEESCCHHHHHHHHH
T ss_pred CCCCEEEEecCCC-HHHHH---------HHHhcCCCEEEeCCCCHHHHHHHHH
Confidence 4778776 43322 11111 1122337899999999999998887
No 123
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=30.89 E-value=36 Score=40.02 Aligned_cols=40 Identities=15% Similarity=0.177 Sum_probs=30.7
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhC-CCeEEEEeeCC
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDL-NHNVDIILPKY 753 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~-GH~V~VItP~y 753 (1198)
++|||++++. | ..|--.-...|++.|+++ ||+|+++++..
T Consensus 5 ~~~~vl~~p~---p---~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 5 KTPHVAIIPS---P---GMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp -CCEEEEECC---S---CHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred CCcEEEEecC---c---chhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 3589998852 2 345666778999999998 99999998763
No 124
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=30.76 E-value=3e+02 Score=25.27 Aligned_cols=107 Identities=11% Similarity=0.081 Sum_probs=58.8
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCCC-CCCcHHHHHHHHh--C
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSIF-EPCGLTQLVAMRY--G 1065 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~~-EpfGLt~LEAMa~--G 1065 (1198)
..+++|+.+ ++.....+..+....+ -.|..+. +.......+. ..|++++--.. ..-|+.+++.++. .
T Consensus 4 ~~~Ilivdd--~~~~~~~l~~~L~~~g----~~v~~~~--~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~ 75 (136)
T 2qzj_A 4 QTKILIIDG--DKDNCQKLKGFLEEKG----ISIDLAY--NCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTT 75 (136)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHTTT----CEEEEES--SHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCC
T ss_pred CCeEEEEcC--CHHHHHHHHHHHHHCC----CEEEEEC--CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCC
Confidence 356677765 4455566666665433 2343322 2222223332 35887764332 3357777777764 4
Q ss_pred CcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1066 SIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1066 ~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
+|+|+ +..... +.+.. + ......+|+..|.+++.|..+|.
T Consensus 76 ~~ii~ls~~~~~-~~~~~-------~--~~~ga~~~l~KP~~~~~L~~~l~ 116 (136)
T 2qzj_A 76 CPIVYMTYINED-QSILN-------A--LNSGGDDYLIKPLNLEILYAKVK 116 (136)
T ss_dssp CCEEEEESCCCH-HHHHH-------H--HHTTCCEEEESSCCHHHHHHHHH
T ss_pred CCEEEEEcCCCH-HHHHH-------H--HHcCCcEEEECCCCHHHHHHHHH
Confidence 66665 433222 11111 1 11237899999999999998777
No 125
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=30.37 E-value=1.8e+02 Score=26.94 Aligned_cols=109 Identities=11% Similarity=0.076 Sum_probs=57.2
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH---HHccEEEEcCCC-CCCcHHHHHHHHh--
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY---AGADFILVPSIF-EPCGLTQLVAMRY-- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy---A~ADi~LvPS~~-EpfGLt~LEAMa~-- 1064 (1198)
..+++|+.+ ++.....+..+..+.+. -.+..+....+ .+..+. ...|++|+--.. +.-|+.+++.++.
T Consensus 20 ~~~ilivdd--~~~~~~~l~~~L~~~g~---~~v~~~~~~~~-~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~ 93 (146)
T 4dad_A 20 MINILVASE--DASRLAHLARLVGDAGR---YRVTRTVGRAA-QIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLH 93 (146)
T ss_dssp GCEEEEECS--CHHHHHHHHHHHHHHCS---CEEEEECCCHH-HHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred CCeEEEEeC--CHHHHHHHHHHHhhCCC---eEEEEeCCHHH-HHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhC
Confidence 356666654 34455556666665541 12333222211 222222 346777764332 3346666666654
Q ss_pred -CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 -GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 -G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +..... +.+.. ....+..+|+..|.+++.|..+|.
T Consensus 94 ~~~~ii~lt~~~~~-~~~~~---------~~~~ga~~~l~Kp~~~~~L~~~i~ 136 (146)
T 4dad_A 94 PGLTCLLVTTDASS-QTLLD---------AMRAGVRDVLRWPLEPRALDDALK 136 (146)
T ss_dssp TTCEEEEEESCCCH-HHHHH---------HHTTTEEEEEESSCCHHHHHHHHH
T ss_pred CCCcEEEEeCCCCH-HHHHH---------HHHhCCceeEcCCCCHHHHHHHHH
Confidence 566665 433222 22111 112236899999999999998887
No 126
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=30.21 E-value=52 Score=40.18 Aligned_cols=48 Identities=23% Similarity=0.603 Sum_probs=36.4
Q ss_pred CCCCcEEEEeecCCccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcC
Q 046057 290 KNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNG 343 (1198)
Q Consensus 290 ~~~~~v~ih~GfN~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg 343 (1198)
.+...+++.+-||+|..... +|. .. +++|..+|.+|+..|..=|++ ||
T Consensus 25 ~~~~~~yl~G~Fn~w~~~~~--~m~--~~-g~~~~~~v~L~~G~y~Y~f~v-dg 72 (645)
T 4aef_A 25 REGSYAYLLGDFNAFNEGSF--RME--QE-GKNWKIKIALPEGVWHYAFSI-DG 72 (645)
T ss_dssp CCSSCEEEEETTTTTCTTSS--EEE--EC-SSEEEEEEEECSEEEEEEEEE-TT
T ss_pred CCCeEEEEEEcCCCCCCCcc--cce--Ec-CCEEEEEEEeCCceEEEEEEE-CC
Confidence 34467999999999976443 343 32 467999999999988888877 65
No 127
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=29.91 E-value=2.3e+02 Score=25.67 Aligned_cols=106 Identities=12% Similarity=0.111 Sum_probs=57.5
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCCC------CCCcHHHHHHHH
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSIF------EPCGLTQLVAMR 1063 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~~------EpfGLt~LEAMa 1063 (1198)
.+++|+.+ ++.....+..+..+.+. .|..+.. .......+. ..|++|+-... +.-|+.+++.++
T Consensus 4 ~~ilivdd--~~~~~~~l~~~L~~~g~----~v~~~~~--~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~ 75 (140)
T 2qr3_A 4 GTIIIVDD--NKGVLTAVQLLLKNHFS----KVITLSS--PVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIK 75 (140)
T ss_dssp CEEEEECS--CHHHHHHHHHHHTTTSS----EEEEECC--HHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHH
T ss_pred ceEEEEeC--CHHHHHHHHHHHHhCCc----EEEEeCC--HHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHH
Confidence 45666665 44455555555554332 3443332 222233333 35777774332 446777777665
Q ss_pred h---CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1064 Y---GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1064 ~---G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
. .+|+|+ +.... .+.+. +.......+++..|.+.+.|..+|.
T Consensus 76 ~~~~~~~ii~ls~~~~-~~~~~---------~~~~~g~~~~l~kp~~~~~l~~~l~ 121 (140)
T 2qr3_A 76 RQYRDLPVVLFTAYAD-IDLAV---------RGIKEGASDFVVKPWDNQKLLETLL 121 (140)
T ss_dssp HHCTTCCEEEEEEGGG-HHHHH---------HHHHTTCCEEEEESCCHHHHHHHHH
T ss_pred hhCcCCCEEEEECCCC-HHHHH---------HHHHcCchheeeCCCCHHHHHHHHH
Confidence 3 677776 33221 11111 1112236899999999999998887
No 128
>4eib_A Glucoamylase; beta barrel, starch binding, amylose, hydrolase; 1.86A {Rhizopus oryzae}
Probab=29.75 E-value=95 Score=29.87 Aligned_cols=52 Identities=17% Similarity=0.327 Sum_probs=33.9
Q ss_pred CCCCCCceEEEEEe--CCCCCC-ccceeeecccc-CCCCCeEEEEEEecCCceEEEEEE
Q 046057 463 SLAHAKELWIHGGY--NNWKDG-LSIVARLVSSE-RTDGDWWYAKVSVPDQALVLDWVF 517 (1198)
Q Consensus 463 ~L~ga~~I~lh~G~--N~W~~~-~~~~~~l~~~~-~~~g~ww~atV~VP~~A~~ldFvF 517 (1198)
.|+-..+|++++.+ |+|... ..+...-.... .+..++|.-.+.+|. | +-|+.
T Consensus 49 NlAyeK~V~VrYs~~~d~W~s~~~~~~A~y~s~~~~~~~e~~~F~~~apG-a--~qFaI 104 (109)
T 4eib_A 49 NIAYSKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKG-I--KEFYI 104 (109)
T ss_dssp CCSSCEEEEEEEECTTSCCTTTTCEEECEEEEECTTSSEEEEEEEEECSC-C--CEEEE
T ss_pred ecccceEEEEEEeecCCCcccCCcEeeEEEecCCCCCCeEEEEEEEECCC-C--EEEEE
Confidence 35677899999999 999962 21222222333 233489999999996 5 44544
No 129
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=29.01 E-value=34 Score=35.35 Aligned_cols=31 Identities=26% Similarity=0.261 Sum_probs=26.2
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEee
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILP 751 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP 751 (1198)
|||+++ |.+.+-..+++.|.+.||+|.++..
T Consensus 1 M~iiIi-----------G~G~~G~~la~~L~~~g~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIII-----------GGETTAYYLARSMLSRKYGVVIINK 31 (218)
T ss_dssp CCEEEE-----------CCHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEE-----------CCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 677765 4488899999999999999999974
No 130
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=28.95 E-value=1.3e+02 Score=32.45 Aligned_cols=38 Identities=13% Similarity=0.059 Sum_probs=26.1
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHhCCcEEE-eCCccccccc
Q 046057 1042 ADFILVPSIFEPCGLTQLVAMRYGSIPVV-RKTGGLYDTV 1080 (1198)
Q Consensus 1042 ADi~LvPS~~EpfGLt~LEAMa~G~PvIv-t~tGGl~E~V 1080 (1198)
=|++++..-.+. -.++.||...|+|+|+ -++..-++.|
T Consensus 158 Pdll~v~Dp~~e-~~ai~EA~~l~IPvIaivDTn~dp~~V 196 (231)
T 3bbn_B 158 PDIVIIVDQQEE-YTALRECITLGIPTICLIDTNCNPDLA 196 (231)
T ss_dssp CSEEEESCTTTT-HHHHHHHHTTTCCEEECCCSSSCCSSC
T ss_pred CCEEEEeCCccc-cHHHHHHHHhCCCEEEEecCCCCccce
Confidence 577776543322 4788999999999998 4555445544
No 131
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=28.76 E-value=48 Score=32.34 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=26.2
Q ss_pred CCCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 705 VKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 705 ~~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
...+.|+|+++. .|.+-..+++.|.+.|++|.++...
T Consensus 15 ~~~~~~~v~IiG-----------~G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFG-----------CGRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEEC-----------CSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cccCCCcEEEEC-----------CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 344568998773 2455566788889999999988754
No 132
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=28.23 E-value=3.6e+02 Score=24.98 Aligned_cols=109 Identities=16% Similarity=0.070 Sum_probs=59.5
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH--HHccEEEEcCC-CCCCcHHHHHHHHh---
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY--AGADFILVPSI-FEPCGLTQLVAMRY--- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy--A~ADi~LvPS~-~EpfGLt~LEAMa~--- 1064 (1198)
+.+++|+.+ ++.....+..+..+.+-. ..+.... +.......+ ...|++++-.. .+.-|+.+++.++.
T Consensus 15 ~~~iLivdd--~~~~~~~l~~~L~~~~~~--~~v~~~~--~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~ 88 (152)
T 3eul_A 15 KVRVVVGDD--HPLFREGVVRALSLSGSV--NVVGEAD--DGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYEL 88 (152)
T ss_dssp CEEEEEECS--SHHHHHHHHHHHHHHSSE--EEEEEES--SHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTC
T ss_pred eEEEEEEcC--CHHHHHHHHHHHhhCCCe--EEEEEeC--CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCC
Confidence 456777765 445556666666655420 1121222 222222222 34677777433 35567777777764
Q ss_pred CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +.... .+.+.. + ......||+..|.+.+.|..+|.
T Consensus 89 ~~~ii~~s~~~~-~~~~~~-------~--~~~g~~~~l~Kp~~~~~l~~~i~ 130 (152)
T 3eul_A 89 PTRVLLISAHDE-PAIVYQ-------A--LQQGAAGFLLKDSTRTEIVKAVL 130 (152)
T ss_dssp SCEEEEEESCCC-HHHHHH-------H--HHTTCSEEEETTCCHHHHHHHHH
T ss_pred CCeEEEEEccCC-HHHHHH-------H--HHcCCCEEEecCCCHHHHHHHHH
Confidence 455665 33222 111111 1 11237899999999999998887
No 133
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=28.01 E-value=56 Score=32.44 Aligned_cols=37 Identities=11% Similarity=0.132 Sum_probs=29.6
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEee
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILP 751 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP 751 (1198)
|||++|-. + ..|....++..+++.|.+.|++|.++-.
T Consensus 1 Mkv~IvY~--S---~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYL--S---DYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEEC--T---TSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEE--C---CChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 77777743 2 2699999999999999999999988753
No 134
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=27.70 E-value=3.4e+02 Score=24.67 Aligned_cols=109 Identities=11% Similarity=-0.007 Sum_probs=64.5
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--------HccEEEEcCC-CCCCcHHHHHH
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--------GADFILVPSI-FEPCGLTQLVA 1061 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--------~ADi~LvPS~-~EpfGLt~LEA 1061 (1198)
..+++|+.+ ++.....+..+..+.+.. ..|..+... ......+. ..|++|+=.. .+.-|+.+++.
T Consensus 7 ~~~ILivdd--~~~~~~~l~~~L~~~g~~--~~v~~~~~~--~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~ 80 (143)
T 2qvg_A 7 KVDILYLED--DEVDIQSVERVFHKISSL--IKIEIAKSG--NQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKE 80 (143)
T ss_dssp CCSEEEECC--CHHHHHHHHHHHHHHCTT--CCEEEESSH--HHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHH
T ss_pred CCeEEEEeC--CHHHHHHHHHHHHHhCCC--ceEEEECCH--HHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHH
Confidence 456777776 455667777777776641 245554433 23333443 4788887543 34567878887
Q ss_pred HH-----hCCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1062 MR-----YGSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1062 Ma-----~G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
++ ..+|+|+ +.... .+.+. ........+|+..|.+++.|..++-
T Consensus 81 l~~~~~~~~~~ii~ls~~~~-~~~~~---------~~~~~g~~~~l~kP~~~~~L~~~~~ 130 (143)
T 2qvg_A 81 LRDDSSFTDIEVFVLTAAYT-SKDKL---------AFESLNIRGHLIKPLDYGEAIKLFW 130 (143)
T ss_dssp HTTSGGGTTCEEEEEESCCC-HHHHH---------HHTTTTCCEEEESSCCHHHHHHHHH
T ss_pred HHcCccccCCcEEEEeCCCC-HHHHH---------HHHhcCCCeEEECCCCHHHHHHHHH
Confidence 76 3566665 33222 22111 1122337899999999999998766
No 135
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=27.67 E-value=3.8e+02 Score=24.97 Aligned_cols=106 Identities=9% Similarity=-0.026 Sum_probs=59.6
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHHh---C
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMRY---G 1065 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa~---G 1065 (1198)
.+++|+.+ ++.....+..+..+.|. .|..+. +.......+. ..|++++-.. .+.-|+.+++.++. .
T Consensus 4 ~~ILivdd--~~~~~~~l~~~L~~~g~----~v~~~~--~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~ 75 (155)
T 1qkk_A 4 PSVFLIDD--DRDLRKAMQQTLELAGF----TVSSFA--SATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPD 75 (155)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTTC----EEEEES--CHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTT
T ss_pred CEEEEEeC--CHHHHHHHHHHHHHcCc----EEEEEC--CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCC
Confidence 45666765 44556666666665443 344332 2222222222 3588777543 34467777776653 6
Q ss_pred CcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1066 SIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1066 ~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
+|+|+ +.... .+.+. +.......+++..|.+++.|..+|.
T Consensus 76 ~pii~ls~~~~-~~~~~---------~~~~~g~~~~l~kP~~~~~L~~~i~ 116 (155)
T 1qkk_A 76 LPMILVTGHGD-IPMAV---------QAIQDGAYDFIAKPFAADRLVQSAR 116 (155)
T ss_dssp SCEEEEECGGG-HHHHH---------HHHHTTCCEEEESSCCHHHHHHHHH
T ss_pred CCEEEEECCCC-hHHHH---------HHHhcCCCeEEeCCCCHHHHHHHHH
Confidence 77776 33322 11111 1111236899999999999998887
No 136
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=27.47 E-value=28 Score=37.78 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=24.2
Q ss_pred CCCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhC-----C-CeEEEEee
Q 046057 705 VKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDL-----N-HNVDIILP 751 (1198)
Q Consensus 705 ~~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~-----G-H~V~VItP 751 (1198)
+.+.+|||++|. .|.+| ..++..|.+. | |+|+++..
T Consensus 4 m~~~~m~I~iiG--------~G~mG---~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFG--------LGGVG---GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEEC--------CSHHH---HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEEC--------cCHHH---HHHHHHHHhCccccCCCCCEEEEEc
Confidence 345679999984 45544 4567777777 9 99998863
No 137
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=27.42 E-value=3e+02 Score=25.55 Aligned_cols=108 Identities=12% Similarity=-0.009 Sum_probs=59.4
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHHh---
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMRY--- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa~--- 1064 (1198)
..+++|+.+ ++.....+..+.++.| ..+.... +.......+. ..|++++=-. -+.-|+.+++.++.
T Consensus 14 ~~~iLivdd--~~~~~~~l~~~L~~~g----~~v~~~~--~~~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~ 85 (143)
T 3m6m_D 14 SMRMLVADD--HEANRMVLQRLLEKAG----HKVLCVN--GAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQA 85 (143)
T ss_dssp -CEEEEECS--SHHHHHHHHHHHHC------CEEEEES--SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHH
T ss_pred cceEEEEeC--CHHHHHHHHHHHHHcC----CeEEEeC--CHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchh
Confidence 456777765 4445556666665443 2344332 2222223333 3688777433 35568888887762
Q ss_pred ----CCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 ----GSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 ----G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+-....-.+.+.. +. ..+..+|+..|.+.+.|..+|.
T Consensus 86 ~~~~~~pii~~s~~~~~~~~~~-------~~--~~Ga~~~l~KP~~~~~L~~~l~ 131 (143)
T 3m6m_D 86 SGMRYTPVVVLSADVTPEAIRA-------CE--QAGARAFLAKPVVAAKLLDTLA 131 (143)
T ss_dssp TTCCCCCEEEEESCCCHHHHHH-------HH--HTTCSEEEESSCCHHHHHHHHH
T ss_pred ccCCCCeEEEEeCCCCHHHHHH-------HH--HcChhheeeCCCCHHHHHHHHH
Confidence 256666322222222211 11 1227899999999999999998
No 138
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=27.23 E-value=4e+02 Score=25.07 Aligned_cols=106 Identities=13% Similarity=0.044 Sum_probs=57.5
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEE-EEccCChHHHHHHHH----HccEEEEcCC-CCCCcHHHHHHHHh-
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRAR-LCLTYDEPLSHLIYA----GADFILVPSI-FEPCGLTQLVAMRY- 1064 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~-f~g~~d~~~l~~iyA----~ADi~LvPS~-~EpfGLt~LEAMa~- 1064 (1198)
.+++|+.+ ++.....+..+.++.+. .+. .+. +.......+. ..|++|+-.. .+.-|+.+++.++.
T Consensus 37 ~~Ilivdd--~~~~~~~l~~~L~~~g~----~v~~~~~--~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~ 108 (157)
T 3hzh_A 37 FNVLIVDD--SVFTVKQLTQIFTSEGF----NIIDTAA--DGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEF 108 (157)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTTC----EEEEEES--SHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHH
T ss_pred eEEEEEeC--CHHHHHHHHHHHHhCCC----eEEEEEC--CHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhh
Confidence 45566654 44455556666655442 232 222 2222222232 3478777543 34567777776654
Q ss_pred --CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 --GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 --G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +.... .+.+.. +. .....+|+..|.+.+.|..+|.
T Consensus 109 ~~~~~ii~ls~~~~-~~~~~~-------~~--~~g~~~~l~KP~~~~~l~~~i~ 152 (157)
T 3hzh_A 109 DKNARVIMISALGK-EQLVKD-------CL--IKGAKTFIVKPLDRAKVLQRVM 152 (157)
T ss_dssp CTTCCEEEEESCCC-HHHHHH-------HH--HTTCSEEEESSCCHHHHHHHHH
T ss_pred CCCCcEEEEeccCc-HHHHHH-------HH--HcCCCEEEeCCCCHHHHHHHHH
Confidence 567766 33222 222211 11 1237899999999999998887
No 139
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=27.05 E-value=35 Score=35.57 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=23.3
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEee
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILP 751 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP 751 (1198)
..|||++|. .|..-..+++.|.+.||+|.++..
T Consensus 27 ~~~~I~iiG-----------~G~~G~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILG-----------SGDFARSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEEC-----------CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEc-----------cCHHHHHHHHHHHHCCCEEEEEeC
Confidence 458999883 344555678888999999988754
No 140
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=26.56 E-value=51 Score=33.93 Aligned_cols=35 Identities=17% Similarity=0.203 Sum_probs=27.1
Q ss_pred cEEEEEccccCCCCCCCcH--HHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGL--GDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl--~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||++ +. .||. .+++..|+.+|+++|++|-+|=-.
T Consensus 1 mkI~v-s~-------kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAV-AG-------KGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEE-EC-------SSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEE-ec-------CCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 78887 52 4555 677788999999999999998643
No 141
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=26.50 E-value=3.1e+02 Score=24.55 Aligned_cols=108 Identities=7% Similarity=0.022 Sum_probs=61.0
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH--HHccEEEEcCC-CCCCcHHHHHHHHh---
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY--AGADFILVPSI-FEPCGLTQLVAMRY--- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy--A~ADi~LvPS~-~EpfGLt~LEAMa~--- 1064 (1198)
..+++|+.+ ++.....+..+..+.+. .|...... ......+ ...|++|+-.. .+.-|+.+++.++.
T Consensus 6 ~~~ilivdd--~~~~~~~l~~~L~~~g~----~v~~~~~~--~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~ 77 (132)
T 3lte_A 6 SKRILVVDD--DQAMAAAIERVLKRDHW----QVEIAHNG--FDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKV 77 (132)
T ss_dssp -CEEEEECS--CHHHHHHHHHHHHHTTC----EEEEESSH--HHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTC
T ss_pred CccEEEEEC--CHHHHHHHHHHHHHCCc----EEEEeCCH--HHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCc
Confidence 456777765 45566667776665442 34443332 2222233 34688777544 35568888888874
Q ss_pred -CCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 -GSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 -G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
..|+|+--++.-.+.+. ++... ...+|+..|.+++.|..+|.
T Consensus 78 ~~~~~ii~~~~~~~~~~~-------~~~~~--g~~~~l~kP~~~~~l~~~i~ 120 (132)
T 3lte_A 78 ANQPKILVVSGLDKAKLQ-------QAVTE--GADDYLEKPFDNDALLDRIH 120 (132)
T ss_dssp SSCCEEEEECCSCSHHHH-------HHHHH--TCCEEECSSCCHHHHHHHHH
T ss_pred cCCCeEEEEeCCChHHHH-------HHHHh--ChHHHhhCCCCHHHHHHHHH
Confidence 23444422221122211 11112 27899999999999999988
No 142
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=26.46 E-value=50 Score=33.26 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=23.9
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||+++. .+|++| ..|++.|.++||+|.++...
T Consensus 1 MkvlVtG-------atG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIG-------ATGRAG---SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEET-------TTSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEc-------CCchhH---HHHHHHHHhCCCEEEEEEcC
Confidence 7877653 245544 56778899999999998754
No 143
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=26.40 E-value=78 Score=34.74 Aligned_cols=43 Identities=21% Similarity=0.098 Sum_probs=32.1
Q ss_pred HHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccc
Q 046057 1035 SHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLY 1077 (1198)
Q Consensus 1035 l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~ 1077 (1198)
+..+++.+|+++--+..+..--.+..|+..|+|+|+..+|-..
T Consensus 67 l~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG~s~ 109 (272)
T 4f3y_A 67 IERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSE 109 (272)
T ss_dssp HHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCH
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCH
Confidence 4566779999998776554444567789999999998887433
No 144
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=25.81 E-value=51 Score=31.68 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=26.6
Q ss_pred CcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 709 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
..||+++ |.|.+-..+++.|.+.||+|.++...
T Consensus 7 ~~~viIi-----------G~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLV-----------GYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEE-----------CCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEE-----------CcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4578776 45778888999999999999999753
No 145
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=25.80 E-value=3.9e+02 Score=24.46 Aligned_cols=106 Identities=8% Similarity=0.024 Sum_probs=60.7
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHHh----
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMRY---- 1064 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa~---- 1064 (1198)
.+++|+.+ ++.....+..+.++.|. .|.... +....-..+. ..|++++=-. -+.-|+.++..++.
T Consensus 5 ~~iLivdd--~~~~~~~l~~~L~~~g~----~v~~~~--~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~ 76 (136)
T 3t6k_A 5 HTLLIVDD--DDTVAEMLELVLRGAGY----EVRRAA--SGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLT 76 (136)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTTC----EEEEES--SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGG
T ss_pred CEEEEEeC--CHHHHHHHHHHHHHCCC----EEEEeC--CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCc
Confidence 45666665 45566667776665542 344332 2322223332 3588777433 34568888887764
Q ss_pred -CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 -GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 -G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ |..+....... +... +..+|+..|.+++.|..+|.
T Consensus 77 ~~~pii~~t~~~~~~~~~~--------~~~~--ga~~~l~KP~~~~~L~~~i~ 119 (136)
T 3t6k_A 77 KTLPILMLTAQGDISAKIA--------GFEA--GANDYLAKPFEPQELVYRVK 119 (136)
T ss_dssp TTCCEEEEECTTCHHHHHH--------HHHH--TCSEEEETTCCHHHHHHHHH
T ss_pred CCccEEEEecCCCHHHHHH--------HHhc--CcceEEeCCCCHHHHHHHHH
Confidence 466665 44332221111 1111 27899999999999998887
No 146
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=25.67 E-value=3e+02 Score=30.41 Aligned_cols=111 Identities=12% Similarity=0.085 Sum_probs=66.3
Q ss_pred CcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecCC-Ch-hhHHHHHHHHHHhCCCCCCcEEEEcc-----CChHH
Q 046057 962 LPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAP-DP-RIQNDFVNLANELHSSHADRARLCLT-----YDEPL 1034 (1198)
Q Consensus 962 ~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsgp-dp-~i~~~L~~la~eLgl~~~drV~f~g~-----~d~~~ 1034 (1198)
..+|++-|..+..-+-.++.+.+..+-.++.+++++..+. ++ .+.+.+.+...+||. ..|..+.- .+.+.
T Consensus 27 g~l~iiGGgedk~~~~~i~~~~v~lagg~~~~I~~IptAs~~~~~~~~~~~~~f~~lG~---~~v~~L~i~~r~~a~~~~ 103 (291)
T 3en0_A 27 PAILIIGGAEDKVHGREILQTFWSRSGGNDAIIGIIPSASREPLLIGERYQTIFSDMGV---KELKVLDIRDRAQGDDSG 103 (291)
T ss_dssp CCEEEECSSCCSSSCCHHHHHHHHHTTGGGCEEEEECTTCSSHHHHHHHHHHHHHHHCC---SEEEECCCCSGGGGGCHH
T ss_pred ceEEEEECCCCccChHHHHHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCC---CeeEEEEecCccccCCHH
Confidence 3455555555533344455455544434457888886543 22 344566777777886 34554432 23455
Q ss_pred HHHHHHHccEEEEcCC--------CCCCcH--HHHHHHHhC-CcEEEeCCcc
Q 046057 1035 SHLIYAGADFILVPSI--------FEPCGL--TQLVAMRYG-SIPVVRKTGG 1075 (1198)
Q Consensus 1035 l~~iyA~ADi~LvPS~--------~EpfGL--t~LEAMa~G-~PvIvt~tGG 1075 (1198)
+...+..||+++++-= +...|+ .+.++...| +|++.+..|.
T Consensus 104 ~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA 155 (291)
T 3en0_A 104 YRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGA 155 (291)
T ss_dssp HHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHH
T ss_pred HHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHH
Confidence 5678899999998741 223343 445677889 8888887764
No 147
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=25.63 E-value=2.5e+02 Score=29.71 Aligned_cols=131 Identities=14% Similarity=0.248 Sum_probs=71.1
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHh-CCCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceec
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQD-LNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVE 785 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~-~GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~ 785 (1198)
..+|||+++.+ |-+.-...|..++++ .+++|..|........ . .......
T Consensus 3 ~~~~riavl~S---------G~Gsnl~all~~~~~~~~~eI~~Vis~~~~a~-----~---------------~~~A~~~ 53 (215)
T 3tqr_A 3 REPLPIVVLIS---------GNGTNLQAIIGAIQKGLAIEIRAVISNRADAY-----G---------------LKRAQQA 53 (215)
T ss_dssp -CCEEEEEEES---------SCCHHHHHHHHHHHTTCSEEEEEEEESCTTCH-----H---------------HHHHHHT
T ss_pred CCCcEEEEEEe---------CCcHHHHHHHHHHHcCCCCEEEEEEeCCcchH-----H---------------HHHHHHc
Confidence 35799987752 446778888888876 3677776654311100 0 0122345
Q ss_pred CeEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEE
Q 046057 786 GLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVF 865 (1198)
Q Consensus 786 Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~ 865 (1198)
|++++.+++.. |. +... +-..+++.++. .+||+|.+-.|..-+-..++.. + .-+ ++
T Consensus 54 gIp~~~~~~~~--~~---------~r~~---~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~-~------~~~-~i 109 (215)
T 3tqr_A 54 DIPTHIIPHEE--FP---------SRTD---FESTLQKTIDH--YDPKLIVLAGFMRKLGKAFVSH-Y------SGR-MI 109 (215)
T ss_dssp TCCEEECCGGG--SS---------SHHH---HHHHHHHHHHT--TCCSEEEESSCCSCCCHHHHHH-T------TTS-EE
T ss_pred CCCEEEeCccc--cC---------chhH---hHHHHHHHHHh--cCCCEEEEccchhhCCHHHHhh-c------cCC-eE
Confidence 78887776431 10 0111 23456677766 4899999987754433333332 2 112 57
Q ss_pred EecCCch----hhhHHHHHHhccCEEEEe
Q 046057 866 TIHNLEF----GTHHIGKAMTYADKATTV 890 (1198)
Q Consensus 866 tIHn~~~----~~~li~~~~~~AD~VitV 890 (1198)
.+|-.-. +.+-+.+++..-+..+.+
T Consensus 110 NiHpSLLP~yrG~~pi~~Ai~~G~~~tGv 138 (215)
T 3tqr_A 110 NIHPSLLPKYTGLNTHERALAAGETEHGV 138 (215)
T ss_dssp EEESSSTTTTCSSCHHHHHHHTTCSEEEE
T ss_pred EeCcccCCCCCChhHHHHHHHcCCCeEEE
Confidence 7776432 344555555555554444
No 148
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=25.47 E-value=4.2e+02 Score=29.81 Aligned_cols=128 Identities=15% Similarity=0.155 Sum_probs=74.9
Q ss_pred hccCEEE--EeCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCC
Q 046057 882 TYADKAT--TVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRK 959 (1198)
Q Consensus 882 ~~AD~Vi--tVS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~ 959 (1198)
.++|.++ +.++....++..+. .+ .|-||-| +.+.|. ..-..--.+++++|--
T Consensus 102 ~~~D~iviR~~~~~~~~~lA~~~-------~v-PVINag~-~~~HPt----------------QaLaDl~Ti~e~~g~l- 155 (323)
T 3gd5_A 102 RYVDGLAIRTFAQTELEEYAHYA-------GI-PVINALT-DHEHPC----------------QVVADLLTIRENFGRL- 155 (323)
T ss_dssp TTCSEEEEECSSHHHHHHHHHHH-------CS-CEEEEEC-SSCCHH----------------HHHHHHHHHHHHHSCC-
T ss_pred HhCCEEEEecCChhHHHHHHHhC-------CC-CEEeCCC-CCCCcH----------------HHHHHHHHHHHHhCCC-
Confidence 5688776 34556666665321 11 2457777 666651 1111223456677622
Q ss_pred CCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecC---CChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 960 SDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSA---PDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 960 ~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsg---pdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
+...|.++|-+. .=.+-++.++..+ |+.|.+++.. |++.+.+..++.+++.|. .+.++.. +.
T Consensus 156 -~glkva~vGD~~--rva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~----~v~~~~d-----~~ 220 (323)
T 3gd5_A 156 -AGLKLAYVGDGN--NVAHSLLLGCAKV---GMSIAVATPEGFTPDPAVSARASEIAGRTGA----EVQILRD-----PF 220 (323)
T ss_dssp -TTCEEEEESCCC--HHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHTC----CEEEESC-----HH
T ss_pred -CCCEEEEECCCC--cHHHHHHHHHHHc---CCEEEEECCCcccCCHHHHHHHHHHHHHcCC----eEEEECC-----HH
Confidence 456899999871 1144566666555 8999999853 333444555556665553 4555422 24
Q ss_pred HHHHHccEEEEcCC
Q 046057 1037 LIYAGADFILVPSI 1050 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~ 1050 (1198)
..+.+||++....+
T Consensus 221 eav~~aDvvyt~~w 234 (323)
T 3gd5_A 221 EAARGAHILYTDVW 234 (323)
T ss_dssp HHHTTCSEEEECCC
T ss_pred HHhcCCCEEEEece
Confidence 56899999998765
No 149
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=25.23 E-value=3.6e+02 Score=23.97 Aligned_cols=105 Identities=15% Similarity=0.072 Sum_probs=61.2
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcC-CCCCCcHHHHHHHHh----
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPS-IFEPCGLTQLVAMRY---- 1064 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS-~~EpfGLt~LEAMa~---- 1064 (1198)
.+++|+.+ ++.....+..+.++.|. .|.... +.......+. ..|++++=. +.+.-|+.+++.++.
T Consensus 4 ~~ilivdd--~~~~~~~l~~~L~~~g~----~v~~~~--~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~ 75 (127)
T 3i42_A 4 QQALIVED--YQAAAETFKELLEMLGF----QADYVM--SGTDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPME 75 (127)
T ss_dssp EEEEEECS--CHHHHHHHHHHHHHTTE----EEEEES--SHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCS
T ss_pred ceEEEEcC--CHHHHHHHHHHHHHcCC----CEEEEC--CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhcc
Confidence 45666765 45566677777776542 344333 3333333333 357777743 345678888888764
Q ss_pred -CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 -GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 -G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +...... ... +...| ..+|+..|.+++.|..++.
T Consensus 76 ~~~~ii~~s~~~~~~-~~~--------~~~~g--~~~~l~KP~~~~~L~~~i~ 117 (127)
T 3i42_A 76 KTSKFVAVSGFAKND-LGK--------EACEL--FDFYLEKPIDIASLEPILQ 117 (127)
T ss_dssp SCCEEEEEECC-CTT-CCH--------HHHHH--CSEEEESSCCHHHHHHHHH
T ss_pred CCCCEEEEECCcchh-HHH--------HHHHh--hHHheeCCCCHHHHHHHHH
Confidence 356665 3332221 111 11112 6799999999999999988
No 150
>2j73_A Pullulanase; alpha-glucan binding, glucosyl- maltotriose, carbohydrate-binding module, hydrolase, glycosidase, beta-sandwich fold; HET: GLC; 1.4A {Thermotoga maritima} SCOP: b.3.1.3 PDB: 2j71_A* 2j72_A*
Probab=25.18 E-value=81 Score=29.57 Aligned_cols=78 Identities=13% Similarity=0.113 Sum_probs=45.0
Q ss_pred cEEEEEEeCCCCCCCCCCceEEEEE-eCCCCCCccceeeeccc-cCCCCCeEEEEEEecCCceEEEEEEecCCCCCCccc
Q 046057 451 DLVRLYYNKQSSSLAHAKELWIHGG-YNNWKDGLSIVARLVSS-ERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAIVY 528 (1198)
Q Consensus 451 ~~V~v~YN~~~g~L~ga~~I~lh~G-~N~W~~~~~~~~~l~~~-~~~~g~ww~atV~VP~~A~~ldFvFsD~~~~~~~~w 528 (1198)
.+|+|+|+|..|.-.+ =.+|+=+. -.+|.. .....+ .+..| =.+.|.+++++..++|+..++ .|
T Consensus 4 ~~v~ihY~r~dg~Y~~-w~Lw~W~~~~~~w~~-----~~~~ftg~D~yG--a~~~v~l~~~~~~i~fIv~~~------~W 69 (103)
T 2j73_A 4 TTIVVHYHRYDGKYDG-WNLWIWPVEPVSQEG-----KAYQFTGEDDFG--KVAVVKLPMDLTKVGIIVRLN------EW 69 (103)
T ss_dssp EEEEEEEECTTCCCTT-EEEEEEEEESSCCCC-----EEECCCEEETTE--EEEEEEESSCCSEEEEEEEET------TT
T ss_pred ceEEEEEECCCCCcCC-cEEEEcCCCcccCcC-----CccCccccCCCe--EEEEEecCCCCCEEEEEEEcC------Cc
Confidence 5799999988776543 24444221 123421 111111 22234 557788999889999999996 45
Q ss_pred cC-CCCcceEEEecC
Q 046057 529 DN-NSRQDFHAIVPK 542 (1198)
Q Consensus 529 DN-N~g~dyh~~V~~ 542 (1198)
.+ +.+.|..+.+..
T Consensus 70 ~~Kd~~~D~~~~~~~ 84 (103)
T 2j73_A 70 QAKDVAKDRFIEIKD 84 (103)
T ss_dssp TEEEEEEEEEEECBT
T ss_pred ccccCCCcceEecCC
Confidence 32 224466665543
No 151
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=25.16 E-value=55 Score=33.22 Aligned_cols=33 Identities=18% Similarity=0.324 Sum_probs=23.6
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||+++ ||.+.+=..|++.|.++||+|.++...
T Consensus 1 MkilVt----------GatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL----------GATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE----------cCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 787754 333444467778899999999998743
No 152
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=25.09 E-value=3.2e+02 Score=24.70 Aligned_cols=108 Identities=11% Similarity=0.058 Sum_probs=62.1
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH--HHccEEEEcCC-CCCCcHHHHHHHHh---
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY--AGADFILVPSI-FEPCGLTQLVAMRY--- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy--A~ADi~LvPS~-~EpfGLt~LEAMa~--- 1064 (1198)
..+++|+.+ ++.....+..+..+.+ ..+..+....+ ....+ ...|++++-.. .+.-|+.+++.++.
T Consensus 7 ~~~ilivdd--~~~~~~~l~~~L~~~~----~~v~~~~~~~~--a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~ 78 (137)
T 3hdg_A 7 ALKILIVED--DTDAREWLSTIISNHF----PEVWSAGDGEE--GERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGA 78 (137)
T ss_dssp CCCEEEECS--CHHHHHHHHHHHHTTC----SCEEEESSHHH--HHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTC
T ss_pred ccEEEEEeC--CHHHHHHHHHHHHhcC----cEEEEECCHHH--HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCC
Confidence 457777776 4455666666666432 24554443333 22222 34688887544 35567878877765
Q ss_pred CCcEEEeCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 GSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+-....-.+.+.. +... ...+|+..|.+++.|..+|.
T Consensus 79 ~~~ii~~s~~~~~~~~~~-------~~~~--g~~~~l~kP~~~~~l~~~i~ 120 (137)
T 3hdg_A 79 KPYVIVISAFSEMKYFIK-------AIEL--GVHLFLPKPIEPGRLMETLE 120 (137)
T ss_dssp CCEEEECCCCCCHHHHHH-------HHHH--CCSEECCSSCCHHHHHHHHH
T ss_pred CCcEEEEecCcChHHHHH-------HHhC--CcceeEcCCCCHHHHHHHHH
Confidence 556665322211122111 1111 27799999999999998887
No 153
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=25.09 E-value=3.7e+02 Score=23.98 Aligned_cols=105 Identities=10% Similarity=-0.009 Sum_probs=60.4
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH---HccEEEEcCCC-C-CCcHHHHHHHHh-
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA---GADFILVPSIF-E-PCGLTQLVAMRY- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA---~ADi~LvPS~~-E-pfGLt~LEAMa~- 1064 (1198)
..+++|+.+ ++.....+.....+.|. ++..+ .+.......+. ..|++++-... + .-|+.+++.++.
T Consensus 5 ~~~ilivdd--~~~~~~~l~~~L~~~g~----~v~~~--~~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~ 76 (132)
T 2rdm_A 5 AVTILLADD--EAILLLDFESTLTDAGF----LVTAV--SSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREI 76 (132)
T ss_dssp SCEEEEECS--SHHHHHHHHHHHHHTTC----EEEEE--SSHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHH
T ss_pred CceEEEEcC--cHHHHHHHHHHHHHcCC----EEEEE--CCHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhc
Confidence 456777776 44556666666665443 34432 23333333333 36888875443 3 467777777653
Q ss_pred --CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 --GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 --G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +.... .+..... ....||+..|.+++.|..+|.
T Consensus 77 ~~~~~ii~~s~~~~-~~~~~~~-----------~~~~~~l~kP~~~~~l~~~i~ 118 (132)
T 2rdm_A 77 DPNMPIVYISGHAA-LEWASNG-----------VPDSIILEKPFTSAQLITAVS 118 (132)
T ss_dssp CTTCCEEEEESSCC-TTHHHHS-----------CTTCEEEESSCCHHHHHHHHH
T ss_pred CCCCCEEEEeCCcc-HHHHHhh-----------cCCcceEeCCCCHHHHHHHHH
Confidence 577776 43332 2222211 112379999999999998887
No 154
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=24.99 E-value=67 Score=33.94 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=28.5
Q ss_pred CCcEEEEEccccCCCCCCCcH--HHHHHHHHHHHHhCCCeEEEEee
Q 046057 708 PPMHIVHIAVEMAPIAKVGGL--GDVVTSLSRTVQDLNHNVDIILP 751 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl--~~vV~~LarAL~~~GH~V~VItP 751 (1198)
..|||+.|+. ..||. .+++..|+.+|+++|++|-+|=-
T Consensus 4 ~~~~vI~v~s------~kGGvGKTt~a~~LA~~la~~g~~VlliD~ 43 (257)
T 1wcv_1 4 AKVRRIALAN------QKGGVGKTTTAINLAAYLARLGKRVLLVDL 43 (257)
T ss_dssp -CCCEEEECC------SSCCHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCEEEEEEe------CCCCchHHHHHHHHHHHHHHCCCCEEEEEC
Confidence 4678777753 24665 56788899999999999999853
No 155
>2j73_A Pullulanase; alpha-glucan binding, glucosyl- maltotriose, carbohydrate-binding module, hydrolase, glycosidase, beta-sandwich fold; HET: GLC; 1.4A {Thermotoga maritima} SCOP: b.3.1.3 PDB: 2j71_A* 2j72_A*
Probab=24.81 E-value=1.3e+02 Score=28.18 Aligned_cols=76 Identities=14% Similarity=0.111 Sum_probs=44.2
Q ss_pred CeEEEEEcccCCCCCCCCcEEEE-eec--CCccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcCCcccc-cCC
Q 046057 276 QDIEVFLNRSLSTLKNEPDVLIM-GAF--NDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQNIYE-NND 351 (1198)
Q Consensus 276 ~~v~v~yN~~l~~L~~~~~v~ih-~Gf--N~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg~~~wD-NN~ 351 (1198)
..|+|.|+|.-+. -...-|| |+= .+|..... .....+.-| =.+.|.++..+.+++|+.+++ .|. .+-
T Consensus 4 ~~v~ihY~r~dg~---Y~~w~Lw~W~~~~~~w~~~~~--~ftg~D~yG--a~~~v~l~~~~~~i~fIv~~~--~W~~Kd~ 74 (103)
T 2j73_A 4 TTIVVHYHRYDGK---YDGWNLWIWPVEPVSQEGKAY--QFTGEDDFG--KVAVVKLPMDLTKVGIIVRLN--EWQAKDV 74 (103)
T ss_dssp EEEEEEEECTTCC---CTTEEEEEEEEESSCCCCEEE--CCCEEETTE--EEEEEEESSCCSEEEEEEEET--TTTEEEE
T ss_pred ceEEEEEECCCCC---cCCcEEEEcCCCcccCcCCcc--CccccCCCe--EEEEEecCCCCCEEEEEEEcC--CcccccC
Confidence 5799999987543 3456666 432 34522111 111122111 456788888999999999995 464 333
Q ss_pred CCceEEEEc
Q 046057 352 QKDFCIAVE 360 (1198)
Q Consensus 352 g~d~~~~V~ 360 (1198)
+.|..+.+.
T Consensus 75 ~~D~~~~~~ 83 (103)
T 2j73_A 75 AKDRFIEIK 83 (103)
T ss_dssp EEEEEEECB
T ss_pred CCcceEecC
Confidence 446665544
No 156
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=24.64 E-value=44 Score=36.99 Aligned_cols=29 Identities=28% Similarity=0.352 Sum_probs=21.7
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEE
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDII 749 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VI 749 (1198)
|||++|. ||. .=..+|.+|+++|++|+|+
T Consensus 2 m~V~IVG---------aGp--aGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIG---------AGI--GGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEEC---------CSH--HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEC---------cCH--HHHHHHHHHHhCCCCEEEE
Confidence 9999984 232 3345677899999999988
No 157
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=24.37 E-value=83 Score=30.19 Aligned_cols=38 Identities=11% Similarity=0.205 Sum_probs=30.1
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||++|... ..|....++..+++.|.+.|++|+++-..
T Consensus 2 ~ki~I~y~S-----~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGS-----STGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEEC-----SSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEEC-----CCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 477666432 37889999999999999999999988643
No 158
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=24.32 E-value=4.6e+02 Score=33.99 Aligned_cols=93 Identities=17% Similarity=0.356 Sum_probs=57.0
Q ss_pred CCCCCcEEEEEEeC-CCCCCCCCCceEEEEEeC----CCCCCccceeeec-cccCCCCCeEEEEEEecCC-ceEEEEEEe
Q 046057 446 EFKGEDLVRLYYNK-QSSSLAHAKELWIHGGYN----NWKDGLSIVARLV-SSERTDGDWWYAKVSVPDQ-ALVLDWVFA 518 (1198)
Q Consensus 446 ~~~aG~~V~v~YN~-~~g~L~ga~~I~lh~G~N----~W~~~~~~~~~l~-~~~~~~g~ww~atV~VP~~-A~~ldFvFs 518 (1198)
+|.|...++|.|.+ .+|-.. .-.||+=+.-. +|-.+. ..+. ...+..| -+++|++++. +..+.|+..
T Consensus 2 ~~~~~~~~~vhy~~~~~~~~~-~~gl~~w~d~~~~~~~w~~~~---~~f~~~~~d~yG--~~~~v~~~~~~~~~~~~~i~ 75 (1014)
T 2ya1_A 2 HMASDNYFRIHVKKLPEENKD-AQGLWTWDDVEKPSENWPNGA---LSFKDAKKDDYG--YYLDVKLKGEQAKKISFLIN 75 (1014)
T ss_dssp GGGCTTEEEEEESSCSSSCGG-GEEEEEEESBSSCCCSTTTTS---EEGGGCEECSSC--EEEEEEBC-CCCCEEEEEEE
T ss_pred CCCCCceEEEEEeeCCCCCcc-CceEEEecCCCCcccCCCccc---ccCcccCccCce--eEEEEEcCCCCcceEEEEEe
Confidence 46788999999997 444443 24577755443 354321 2222 1223345 7788999644 889999999
Q ss_pred cCCCCCCccccCCCCcceEEEecCCCCccchhhH
Q 046057 519 DGPPGKAIVYDNNSRQDFHAIVPKSIPDELYWVE 552 (1198)
Q Consensus 519 D~~~~~~~~wDNN~g~dyh~~V~~~~~~e~~~~~ 552 (1198)
++. |+ +-+.|-++.+...-..| -|+.
T Consensus 76 ~~~------~~-~~~~d~~~~~~~~~~~e-vw~~ 101 (1014)
T 2ya1_A 76 NTA------GK-NLTGDKSVEKLVPKMNE-AWLD 101 (1014)
T ss_dssp ETT------CC-BSSCCEEEECSSTTCCE-EEEC
T ss_pred cCC------Cc-ccCCcceEeecCcccce-EEEe
Confidence 873 33 45889999885322222 4765
No 159
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=24.31 E-value=1e+02 Score=37.04 Aligned_cols=68 Identities=7% Similarity=-0.010 Sum_probs=43.2
Q ss_pred CCCcEEEEEEeCCCCCCCCCCceEEE-EEeCCCCCCccceeeeccccC-CCCCeEEEEEEecCCceEEEEEEe
Q 046057 448 KGEDLVRLYYNKQSSSLAHAKELWIH-GGYNNWKDGLSIVARLVSSER-TDGDWWYAKVSVPDQALVLDWVFA 518 (1198)
Q Consensus 448 ~aG~~V~v~YN~~~g~L~ga~~I~lh-~G~N~W~~~~~~~~~l~~~~~-~~g~ww~atV~VP~~A~~ldFvFs 518 (1198)
..|++|+|.+. ..-..+.+|.|+ |.+|+|..+......|.+... +.+++|+++|..+..-..-.|...
T Consensus 18 ~~~~~~~i~~~---~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 18 ISETQLRVRLR---AKKGDVVRCEVLYADRYASPEEELAHALAGKAGSDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp EETTEEEEEEE---EETTTCSEEEEEEECTTCCTTSCCEEEECEEEEECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCCEEEEEEE---ECCCCccEEEEEECCCcCCCCCceEEEEEEEeecCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 35899999987 444479999995 668999753222334444332 334789999987654444444444
No 160
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=24.30 E-value=4.1e+02 Score=24.18 Aligned_cols=105 Identities=4% Similarity=-0.002 Sum_probs=52.4
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH--HHccEEEEcCC-CCCCcHHHHHHHH-----
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY--AGADFILVPSI-FEPCGLTQLVAMR----- 1063 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy--A~ADi~LvPS~-~EpfGLt~LEAMa----- 1063 (1198)
.+++|+.+ ++.....+..+..+. -.+..... .......+ ...|++++-.. .+.-|+.+++.++
T Consensus 4 ~~iLivdd--~~~~~~~l~~~l~~~-----~~v~~~~~--~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~ 74 (140)
T 3n53_A 4 KKILIIDQ--QDFSRIELKNFLDSE-----YLVIESKN--EKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGL 74 (140)
T ss_dssp CEEEEECS--CHHHHHHHHHHHTTT-----SEEEEESS--HHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTC
T ss_pred CEEEEEeC--CHHHHHHHHHHHHhc-----ceEEEeCC--HHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCccc
Confidence 35666655 444444555554422 23433332 22222222 24577777543 3445666677666
Q ss_pred hCCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1064 YGSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1064 ~G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
..+|+|+ +.... .+.+... ...+..+|+..|.+++.|..+|.
T Consensus 75 ~~~~ii~~s~~~~-~~~~~~~---------~~~g~~~~l~KP~~~~~l~~~i~ 117 (140)
T 3n53_A 75 KNVPLILLFSSEH-KEAIVNG---------LHSGADDYLTKPFNRNDLLSRIE 117 (140)
T ss_dssp TTCCEEEEECC-----CTTTT---------TTCCCSEEEESSCCHHHHHHHHH
T ss_pred CCCCEEEEecCCC-HHHHHHH---------HhcCCCeeeeCCCCHHHHHHHHH
Confidence 4667776 43322 2222211 12237899999999999998887
No 161
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=24.21 E-value=62 Score=35.58 Aligned_cols=40 Identities=18% Similarity=0.309 Sum_probs=28.6
Q ss_pred CCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeCCC
Q 046057 707 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYD 754 (1198)
Q Consensus 707 e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~y~ 754 (1198)
.+.||||+....- =.+..+..|.++|++ +|+|.|+.|...
T Consensus 9 ~~~m~ILlTNDDG-------i~apGi~aL~~~l~~-~~~V~VVAP~~~ 48 (261)
T 3ty2_A 9 TPKLRLLLSNDDG-------VYAKGLAILAKTLAD-LGEVDVVAPDRN 48 (261)
T ss_dssp --CCEEEEECSSC-------TTCHHHHHHHHHHTT-TSEEEEEEESSC
T ss_pred CCCCeEEEEcCCC-------CCCHHHHHHHHHHHh-cCCEEEEecCCC
Confidence 4569998776432 124568888999988 899999999744
No 162
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=24.18 E-value=5.7e+02 Score=28.47 Aligned_cols=129 Identities=16% Similarity=0.184 Sum_probs=74.2
Q ss_pred hccCEEEE--eCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCC
Q 046057 882 TYADKATT--VSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRK 959 (1198)
Q Consensus 882 ~~AD~Vit--VS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~ 959 (1198)
.++|.++. .++....++..+. .+- |-||-+ +.+.|. ..-..--.+++++|--
T Consensus 93 ~~~D~iviR~~~~~~~~~lA~~~-------~vP-VINa~~-~~~HPt----------------QaLaDl~Ti~e~~g~l- 146 (307)
T 2i6u_A 93 RYVDAIVWRTFGQERLDAMASVA-------TVP-VINALS-DEFHPC----------------QVLADLQTIAERKGAL- 146 (307)
T ss_dssp HHEEEEEEECSSHHHHHHHHHHC-------SSC-EEESCC-SSCCHH----------------HHHHHHHHHHHHHSCC-
T ss_pred HhCCEEEEecCChhHHHHHHhhC-------CCC-EEcCCC-CCcCcc----------------HHHHHHHHHHHHhCCc-
Confidence 34676653 3556666665321 122 446765 555551 1112223456667622
Q ss_pred CCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecC---CChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 960 SDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSA---PDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 960 ~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsg---pdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
+...|.++|-+ +..=.+-++.++.++ |+.|.++|.. |++.+.+.+++.+++.|. .+.++.. +.
T Consensus 147 -~gl~va~vGD~-~~rva~Sl~~~~~~~---g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~----~~~~~~d-----~~ 212 (307)
T 2i6u_A 147 -RGLRLSYFGDG-ANNMAHSLLLGGVTA---GIHVTVAAPEGFLPDPSVRAAAERRAQDTGA----SVTVTAD-----AH 212 (307)
T ss_dssp -TTCEEEEESCT-TSHHHHHHHHHHHHT---TCEEEEECCTTSCCCHHHHHHHHHHHHHHTC----CEEEESC-----HH
T ss_pred -CCeEEEEECCC-CcCcHHHHHHHHHHC---CCEEEEECCccccCCHHHHHHHHHHHHHcCC----eEEEEEC-----HH
Confidence 45679999986 222245566666665 8999999863 223344445666666663 4655422 34
Q ss_pred HHHHHccEEEEcCC
Q 046057 1037 LIYAGADFILVPSI 1050 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~ 1050 (1198)
..+.+||++....+
T Consensus 213 eav~~aDvvy~~~w 226 (307)
T 2i6u_A 213 AAAAGADVLVTDTW 226 (307)
T ss_dssp HHHTTCSEEEECCS
T ss_pred HHhcCCCEEEecce
Confidence 66899999998765
No 163
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=24.15 E-value=5.7e+02 Score=25.90 Aligned_cols=109 Identities=9% Similarity=0.071 Sum_probs=63.8
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH--HHccEEEEcCC-CCCCcHHHHHHHHh--CC
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY--AGADFILVPSI-FEPCGLTQLVAMRY--GS 1066 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy--A~ADi~LvPS~-~EpfGLt~LEAMa~--G~ 1066 (1198)
.+++|+.+ ++.....+..+....+. .|..+....+.. ..+ ...|++|+--. .+.-|+.+++.++. .+
T Consensus 6 ~~ILivdd--~~~~~~~l~~~L~~~g~----~v~~~~~~~~al--~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~ 77 (238)
T 2gwr_A 6 QRILVVDD--DASLAEMLTIVLRGEGF----DTAVIGDGTQAL--TAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGV 77 (238)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTTC----EEEEECCGGGHH--HHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCC
T ss_pred CeEEEEeC--CHHHHHHHHHHHHHCCC----EEEEECCHHHHH--HHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCC
Confidence 46677765 45566667776665443 354443333322 222 24688877433 34567888877764 67
Q ss_pred cEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhcc
Q 046057 1067 IPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIH 1118 (1198)
Q Consensus 1067 PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~~ 1118 (1198)
|+|+ +.......... +. .....||+..|.+++.|..+|..+.
T Consensus 78 ~ii~lt~~~~~~~~~~--------~~--~~Ga~~~l~Kp~~~~~L~~~i~~~~ 120 (238)
T 2gwr_A 78 PIVMLTAKTDTVDVVL--------GL--ESGADDYIMKPFKPKELVARVRARL 120 (238)
T ss_dssp CEEEEEETTCCSCHHH--------HH--HTTCCEEEEESCCHHHHHHHHHHHC
T ss_pred cEEEEeCCCCHHHHHH--------HH--HCCCCEEEeCCCCHHHHHHHHHHHH
Confidence 7776 43332222111 11 1237899999999999999998544
No 164
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=24.15 E-value=4.4e+02 Score=24.51 Aligned_cols=65 Identities=12% Similarity=0.049 Sum_probs=38.4
Q ss_pred ccEEEEcCC-CCCCcHHHHHHHHh---CCcEEEeCCccccccccccccchhhhhccCCC-CcEEEEcCCCHHHHHHHHh
Q 046057 1042 ADFILVPSI-FEPCGLTQLVAMRY---GSIPVVRKTGGLYDTVFDVDHDKERAQALDLE-PNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1042 ADi~LvPS~-~EpfGLt~LEAMa~---G~PvIvt~tGGl~E~V~d~d~~~~~~~~~~~~-~nG~lf~~~D~~~La~AL~ 1115 (1198)
.|++|+-.. .+.-|+.+++.++. .+|+|+-....-.+.+.. ..... ..+|+..|.+++.|..+|.
T Consensus 59 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~---------~~~~g~~~~~l~KP~~~~~l~~~i~ 128 (153)
T 3hv2_A 59 VDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAK---------AINEGEIYRYLSKPWDDQELLLALR 128 (153)
T ss_dssp CSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHH---------HHHTTCCSEEECSSCCHHHHHHHHH
T ss_pred CCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHH---------HHhCCCcceEEeCCCCHHHHHHHHH
Confidence 477766433 34567777776653 566666322222222111 11122 5789999999999998887
No 165
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=23.93 E-value=49 Score=36.68 Aligned_cols=33 Identities=12% Similarity=0.131 Sum_probs=24.8
Q ss_pred CCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEee
Q 046057 708 PPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILP 751 (1198)
Q Consensus 708 ~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP 751 (1198)
.+|||++|. +|.+=..++..|.+.||+|.++..
T Consensus 13 ~~~kI~iIG-----------~G~mG~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 13 MEMRFFVLG-----------AGSWGTVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp -CCEEEEEC-----------CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cCCcEEEEC-----------cCHHHHHHHHHHHhCCCeEEEEeC
Confidence 369999983 344446778888999999998864
No 166
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=23.93 E-value=4.3e+02 Score=24.49 Aligned_cols=108 Identities=14% Similarity=0.031 Sum_probs=59.1
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHHh---
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMRY--- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa~--- 1064 (1198)
..+++|+.+ ++.....+..+..+.|. .|..+. +.......+. ..|++|+-.. .+.-|+.++..++.
T Consensus 7 ~~~iLivdd--~~~~~~~l~~~L~~~g~----~v~~~~--~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~ 78 (154)
T 2rjn_A 7 NYTVMLVDD--EQPILNSLKRLIKRLGC----NIITFT--SPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYP 78 (154)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHTTTC----EEEEES--CHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCT
T ss_pred CCeEEEEcC--CHHHHHHHHHHHHHcCC----eEEEeC--CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCC
Confidence 456777765 44455566666654432 344332 2223333333 3588877443 34467777776653
Q ss_pred CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +.... .+.+.. +...| ...+|+..|.+++.|..+|.
T Consensus 79 ~~~ii~ls~~~~-~~~~~~-------~~~~g-~~~~~l~kP~~~~~L~~~i~ 121 (154)
T 2rjn_A 79 DIERVVISGYAD-AQATID-------AVNRG-KISRFLLKPWEDEDVFKVVE 121 (154)
T ss_dssp TSEEEEEECGGG-HHHHHH-------HHHTT-CCSEEEESSCCHHHHHHHHH
T ss_pred CCcEEEEecCCC-HHHHHH-------HHhcc-chheeeeCCCCHHHHHHHHH
Confidence 566665 33322 111111 11111 25799999999999998887
No 167
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=23.80 E-value=4.2e+02 Score=24.16 Aligned_cols=106 Identities=10% Similarity=0.060 Sum_probs=61.5
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCC-CCCCcHHHHHHHHh----
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSI-FEPCGLTQLVAMRY---- 1064 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~-~EpfGLt~LEAMa~---- 1064 (1198)
.+++|+.+ ++.....+..+..+.+. .+.... +......++. ..|++++=-. .+.-|+.+++.++.
T Consensus 4 ~~ILivdd--~~~~~~~l~~~L~~~g~----~v~~~~--~~~~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~ 75 (138)
T 3c3m_A 4 YTILVVDD--SPMIVDVFVTMLERGGY----RPITAF--SGEECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPAT 75 (138)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTTC----EEEEES--SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTT
T ss_pred ceEEEEeC--CHHHHHHHHHHHHHcCc----eEEEeC--CHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCccc
Confidence 35666665 55566667777665442 344322 3333333333 3588877433 34568888888864
Q ss_pred -CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 -GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 -G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +....... .+...+....+|+..|.+.+.|..+|.
T Consensus 76 ~~~~ii~ls~~~~~~~----------~~~~~~~~~~~~l~KP~~~~~L~~~i~ 118 (138)
T 3c3m_A 76 RDIPVLMLTAKPLTPE----------EANEYGSYIEDYILKPTTHHQLYEAIE 118 (138)
T ss_dssp TTSCEEEEESSCCCHH----------HHHHTTTTCSEEEECCCHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHH----------HHHHhhcCHhheEeCCCCHHHHHHHHH
Confidence 456665 43321111 122233335799999999999998888
No 168
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=23.80 E-value=2.9e+02 Score=29.03 Aligned_cols=129 Identities=19% Similarity=0.194 Sum_probs=70.4
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhC--CCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCe
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDL--NHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGL 787 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~--GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv 787 (1198)
|||+++.. |.+.....+.++|.+. +++|..|....+.. .+. ......|+
T Consensus 4 ~ki~vl~s---------G~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~---~v~-----------------~~A~~~gI 54 (212)
T 3av3_A 4 KRLAVFAS---------GSGTNFQAIVDAAKRGDLPARVALLVCDRPGA---KVI-----------------ERAARENV 54 (212)
T ss_dssp EEEEEECC---------SSCHHHHHHHHHHHTTCCCEEEEEEEESSTTC---HHH-----------------HHHHHTTC
T ss_pred cEEEEEEE---------CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCc---HHH-----------------HHHHHcCC
Confidence 58887742 3355788888898887 68887665432110 000 01233577
Q ss_pred EEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEe
Q 046057 788 SVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTI 867 (1198)
Q Consensus 788 ~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tI 867 (1198)
+++.+++.. |. +. .-|...+++.++. .+||+|.+-.|..-+-+.++.. + .- -++.+
T Consensus 55 p~~~~~~~~--~~---------~~---~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~-~------~~-~~iNi 110 (212)
T 3av3_A 55 PAFVFSPKD--YP---------SK---AAFESEILRELKG--RQIDWIALAGYMRLIGPTLLSA-Y------EG-KIVNI 110 (212)
T ss_dssp CEEECCGGG--SS---------SH---HHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHHH-T------TT-CEEEE
T ss_pred CEEEeCccc--cc---------ch---hhhHHHHHHHHHh--cCCCEEEEchhhhhCCHHHHhh-h------cC-CEEEE
Confidence 777665431 10 11 1233456666766 4899999887754433333332 2 11 26777
Q ss_pred cCCc----hhhhHHHHHHhccCEEEEeC
Q 046057 868 HNLE----FGTHHIGKAMTYADKATTVS 891 (1198)
Q Consensus 868 Hn~~----~~~~li~~~~~~AD~VitVS 891 (1198)
|..- -+.+-+.+++.+-+..+.++
T Consensus 111 HpSLLP~yrG~~pi~~Ai~~G~~~tGvT 138 (212)
T 3av3_A 111 HPSLLPAFPGKDAIGQAYRAGVSETGVT 138 (212)
T ss_dssp ESSCTTSSCSTTHHHHHHHHTCSEEEEE
T ss_pred ecCcCCCCCCcCHHHHHHHcCCCeEEEE
Confidence 7643 23455666666655555543
No 169
>2j44_A SPNDX, alkaline amylopullulanase; virulence, glycogen binding, carbohydrate-binding module; HET: GLC; 2.1A {Streptococcus pneumoniae} SCOP: b.3.1.3 b.3.1.3
Probab=23.41 E-value=3.3e+02 Score=28.94 Aligned_cols=90 Identities=12% Similarity=0.136 Sum_probs=50.1
Q ss_pred CCCCcEEEecccCCCCCeEEEEEcccCCCCCCCCcEEEE-eecC------CccccccceecccccCCCCeEEEEEEecCC
Q 046057 260 LRQKKIFVYPQVVKPDQDIEVFLNRSLSTLKNEPDVLIM-GAFN------DWRWKSFTFRLNKTHLKGDWWSCQVHVPKE 332 (1198)
Q Consensus 260 ~~g~~v~v~P~~~~aG~~v~v~yN~~l~~L~~~~~v~ih-~GfN------~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~ 332 (1198)
-.|..++++| | .+-..|+|+|+|.-+. -...-|| |+=. +|-.... -.....-| =+.+|.+++.
T Consensus 96 ~~g~~~~~~~-P-~~~~~v~IhY~R~Dg~---Y~~w~Lw~W~d~~~~~~~~W~~~~~---ft~~D~yG--ay~~vpl~~~ 165 (217)
T 2j44_A 96 DQDYKVFSYE-P-QPAGTVRVNYYRTDGN---YDKKSLWYWGDVKNPSSAQWPDGTD---FTATGKYG--RYIDIPLNEA 165 (217)
T ss_dssp CTTCCEESSC-C-CCSSEEEEEEECSSSC---CTTEEEEEESSCSSCCCSSTTCCEE---CCEEETTE--EEEEEECCTT
T ss_pred eCCCcccccc-c-ccCceEEEEEeCCCCC---CCCceEEEcCCCCCccccCCCCCCC---cCccCCce--eEEEEECCCC
Confidence 3344444433 3 4556799999987644 4456666 4422 4543321 11111101 2356667788
Q ss_pred ceeEeEEEEcCCc-ccccCCCCceEEEEc
Q 046057 333 AFKIDFVFFNGQN-IYENNDQKDFCIAVE 360 (1198)
Q Consensus 333 A~~lnFvF~dg~~-~wDNN~g~d~~~~V~ 360 (1198)
+.+|+|+.+++.. .++. .+.||+|...
T Consensus 166 ~~~i~fIv~~g~~~~~k~-~~~D~~f~~~ 193 (217)
T 2j44_A 166 AREFGFLLLDESKGDVKI-RKENYKFTDL 193 (217)
T ss_dssp CCCEEEEEEETTSSSTTS-SSSCEEECCS
T ss_pred CceeEEEEEeCCcccccC-CCCceeEecC
Confidence 8999999999842 1222 3557777543
No 170
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=23.22 E-value=3.3e+02 Score=29.93 Aligned_cols=100 Identities=11% Similarity=0.046 Sum_probs=65.0
Q ss_pred EecCCCccCHHHHHHHHHHhhcCCcEEEEEecC-----------CChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 968 ITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSA-----------PDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 968 VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsg-----------pdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
|.-..+.-..+.+++.+..+.+-+.+++-.+.- ........+.++++++|+. .++-.+|...+.
T Consensus 42 IAgpc~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~-----~~te~~d~~~~~ 116 (276)
T 1vs1_A 42 IAGPCSVESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLP-----VVTEVLDPRHVE 116 (276)
T ss_dssp EEECSBCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCC-----EEEECCCGGGHH
T ss_pred EEecCCCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCc-----EEEecCCHHHHH
Confidence 333346667888888777776656666544421 1123456788889999983 455667777666
Q ss_pred HHHHHccEEEEcCC-CCCCcHHHHHHHHhCCcEEEeCC
Q 046057 1037 LIYAGADFILVPSI-FEPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~-~EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
.+..-+|++-+||+ .+.+.| +-++...|+||+.+.-
T Consensus 117 ~l~~~vd~~kIgs~~~~n~~l-l~~~a~~~kPV~lk~G 153 (276)
T 1vs1_A 117 TVSRYADMLQIGARNMQNFPL-LREVGRSGKPVLLKRG 153 (276)
T ss_dssp HHHHHCSEEEECGGGTTCHHH-HHHHHHHTCCEEEECC
T ss_pred HHHHhCCeEEECcccccCHHH-HHHHHccCCeEEEcCC
Confidence 66556999999997 344444 2234468999998653
No 171
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=23.19 E-value=2.9e+02 Score=25.68 Aligned_cols=64 Identities=17% Similarity=0.112 Sum_probs=39.3
Q ss_pred ccEEEEcCC-CCCCcHHHHHHHHh---CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1042 ADFILVPSI-FEPCGLTQLVAMRY---GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1042 ADi~LvPS~-~EpfGLt~LEAMa~---G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.|++|+-.. .+.-|+.+++.++. .+|+|+ +.... .+.+.. + ......+|+..|.+.+.|..+|.
T Consensus 67 ~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~-~~~~~~-------~--~~~g~~~~l~Kp~~~~~l~~~i~ 135 (150)
T 4e7p_A 67 VDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR-AGYFER-------A--VKAGVDAYVLKERSIADLMQTLH 135 (150)
T ss_dssp CSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC-HHHHHH-------H--HHTTCSEEEETTSCHHHHHHHHH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC-HHHHHH-------H--HHCCCcEEEecCCCHHHHHHHHH
Confidence 577776433 35567777777765 566665 33221 122111 1 11237899999999999998887
No 172
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=22.76 E-value=5.1e+02 Score=29.41 Aligned_cols=127 Identities=18% Similarity=0.212 Sum_probs=75.2
Q ss_pred hccCEEEE--eCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCC
Q 046057 882 TYADKATT--VSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRK 959 (1198)
Q Consensus 882 ~~AD~Vit--VS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~ 959 (1198)
.++|.++. .++....++..+. .+- |-||-| +.+.|. ..-..--.+++++|--
T Consensus 124 ~y~D~IviR~~~~~~~~~lA~~~-------~vP-VINag~-~~~HPt----------------QaLaDl~TI~E~~G~l- 177 (340)
T 4ep1_A 124 HYIDGIMIRTFSHADVEELAKES-------SIP-VINGLT-DDHHPC----------------QALADLMTIYEETNTF- 177 (340)
T ss_dssp HHCSEEEEECSCHHHHHHHHHHC-------SSC-EEEEEC-SSCCHH----------------HHHHHHHHHHHHHSCC-
T ss_pred HhCCEEEEecCChhHHHHHHHhC-------CCC-EEeCCC-CCCCcH----------------HHHHHHHHHHHHhCCC-
Confidence 45887664 3556666665321 112 447766 455551 1111223466777732
Q ss_pred CCCcEEEEEecCCCccC-HHHHHHHHHHhhcCCcEEEEEecC---CChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHH
Q 046057 960 SDLPLVGIITRLTHQKG-IHLIKHAIWRTLDRGGQVVLLGSA---PDPRIQNDFVNLANELHSSHADRARLCLTYDEPLS 1035 (1198)
Q Consensus 960 ~d~plIg~VGRL~~qKG-idlIleAl~~ll~~~~qLVIvGsg---pdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l 1035 (1198)
+...|.++|-+ .+ .+-++.++.++ |+.|.+++.. |++.+.+.+++++++.|. .+.++.. +
T Consensus 178 -~glkva~vGD~---~nva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~----~v~~~~d-----~ 241 (340)
T 4ep1_A 178 -KGIKLAYVGDG---NNVCHSLLLASAKV---GMHMTVATPVGYRPNEEIVKKALAIAKETGA----EIEILHN-----P 241 (340)
T ss_dssp -TTCEEEEESCC---CHHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHCC----CEEEESC-----H
T ss_pred -CCCEEEEECCC---chhHHHHHHHHHHc---CCEEEEECCcccCCCHHHHHHHHHHHHHcCC----eEEEECC-----H
Confidence 45689999977 23 44566666665 8999999863 333455556666666663 4555432 2
Q ss_pred HHHHHHccEEEEcCC
Q 046057 1036 HLIYAGADFILVPSI 1050 (1198)
Q Consensus 1036 ~~iyA~ADi~LvPS~ 1050 (1198)
...+.+||++....+
T Consensus 242 ~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 242 ELAVNEADFIYTDVW 256 (340)
T ss_dssp HHHHTTCSEEEECCC
T ss_pred HHHhCCCCEEEecCc
Confidence 466899999998765
No 173
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=22.49 E-value=78 Score=35.44 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=30.8
Q ss_pred cCCCCCCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 701 FGGVVKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 701 ~g~~~~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
+|.++..+.|||+++. .| .....+++++++.|++|.++.+.
T Consensus 3 ~~~pm~~~~~~ili~g--------~g---~~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 3 LGTALRPAATRVMLLG--------SG---ELGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp BCCTTSTTCCEEEEES--------CS---HHHHHHHHHHHTTTCEEEEEESS
T ss_pred cCCCCCCCCCEEEEEC--------CC---HHHHHHHHHHHHcCCEEEEEECC
Confidence 5666667789999884 22 24567899999999999888754
No 174
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=22.46 E-value=78 Score=30.28 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=29.6
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEee
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILP 751 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP 751 (1198)
|||++|.. ++ .|-...++..+++.|.+.|++|+++-.
T Consensus 1 mki~iiy~--S~---~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYG--ST---TGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEE--CS---SSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEE--CC---cCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 78877743 22 688899999999999999999988753
No 175
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=22.26 E-value=1.5e+02 Score=33.76 Aligned_cols=137 Identities=27% Similarity=0.301 Sum_probs=77.4
Q ss_pred cccccchhhhchHHHHHHHHHHhCCCCCCCcEEEEEecCCCccC---------HHHHHHHHHHhhcCCcEEEEEecCCCh
Q 046057 933 VSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKG---------IHLIKHAIWRTLDRGGQVVLLGSAPDP 1003 (1198)
Q Consensus 933 ~~ys~~~~~~gk~~~k~aLrq~lGL~~~d~plIg~VGRL~~qKG---------idlIleAl~~ll~~~~qLVIvGsgpdp 1003 (1198)
...+.+.+.+--......|++.+|+. .|.|.+.| |+|+-| ++.|.-|+..+.+.++. +.|.-|-
T Consensus 178 ~~it~e~i~~~i~~~~~~l~~~fGi~---~PrIAV~g-LNPHAGE~G~~G~EE~~iI~PAi~~lr~~Gi~--~~GP~pa- 250 (334)
T 3lxy_A 178 GAITQASLHEVITILDNDLKTKFGIT---QPQIYVCG-LNPHAGEGGHMGHEEIDTIIPALNTLRQQGIN--LIGPLPA- 250 (334)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTSCCS---SCCEEEEC-SSGGGGGGGTTCSHHHHTHHHHHHHHHHTTCC--EEEEECH-
T ss_pred hhCCHHHHHHHHHHHHHHHHHHcCCC---CCCEEEEe-cCCCCCCCCCCCchhHHHHHHHHHHHHHCCCc--eeCCCCh-
Confidence 45566666666666677888889986 35566555 544432 46677788887766665 3465430
Q ss_pred hhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccccccccc
Q 046057 1004 RIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDV 1083 (1198)
Q Consensus 1004 ~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~d~ 1083 (1198)
...| ....+..+|++|.+ |---|+..+..+..+.=|=+| .|++=+-...
T Consensus 251 --Dt~F-------------------------~~~~~~~~D~vlaM--YHDQGlip~K~l~F~~gVNvT--lGLP~iRTS~ 299 (334)
T 3lxy_A 251 --DTLF-------------------------QPKYLQHADAVLAM--YHDQGLPVLKYQGFGRAVNIT--LGLPFIRTSV 299 (334)
T ss_dssp --HHHT-------------------------SHHHHTTCSEEEES--SHHHHHHHHHHHHTTCCEEEE--ESSSSCEEEE
T ss_pred --HHhc-------------------------ChhhhccCCEEEEc--ccchhhHhHHhcccCccEEEe--cCCCeeeecC
Confidence 0000 12334678888866 445688889888874433222 3344333333
Q ss_pred ccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1084 DHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1084 d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
||.+ |-+.. ..| -.|+.+|.+||.
T Consensus 300 DHGT--AfDIA--GkG----~A~~~S~~~Ai~ 323 (334)
T 3lxy_A 300 DHGT--ALELA--ATG----TADVGSFITALN 323 (334)
T ss_dssp SSCC--CGGGT--TTT----CSCCHHHHHHHH
T ss_pred CCCc--chhhc--cCC----CCChHHHHHHHH
Confidence 2221 00000 111 457889998887
No 176
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=22.20 E-value=2.3e+02 Score=30.02 Aligned_cols=127 Identities=11% Similarity=0.184 Sum_probs=68.1
Q ss_pred CCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCC--CeEEEEeeCCCCCcccccccccccccccCCCceeEEeece
Q 046057 706 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLN--HNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGK 783 (1198)
Q Consensus 706 ~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~G--H~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~ 783 (1198)
+.+++||+++.+ |.+.....|..++.+.+ ++|..|........ .+ ....
T Consensus 5 ~~~~~ri~vl~S---------G~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~-----~l---------------~~A~ 55 (215)
T 3kcq_A 5 MKKELRVGVLIS---------GRGSNLEALAKAFSTEESSVVISCVISNNAEAR-----GL---------------LIAQ 55 (215)
T ss_dssp --CCEEEEEEES---------SCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCT-----HH---------------HHHH
T ss_pred CCCCCEEEEEEE---------CCcHHHHHHHHHHHcCCCCcEEEEEEeCCcchH-----HH---------------HHHH
Confidence 356789987752 44677888888887654 56665554311100 00 1223
Q ss_pred ecCeEEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeE
Q 046057 784 VEGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARI 863 (1198)
Q Consensus 784 ~~Gv~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipv 863 (1198)
..|++++.+++.. +. ...+++.++. .+||+|.+-.|..-+-+.++.. + .- -
T Consensus 56 ~~gIp~~~~~~~~--~~-----------------~~~~~~~L~~--~~~Dlivlagy~~IL~~~~l~~-~------~~-~ 106 (215)
T 3kcq_A 56 SYGIPTFVVKRKP--LD-----------------IEHISTVLRE--HDVDLVCLAGFMSILPEKFVTD-W------HH-K 106 (215)
T ss_dssp HTTCCEEECCBTT--BC-----------------HHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHH-T------TT-S
T ss_pred HcCCCEEEeCccc--CC-----------------hHHHHHHHHH--hCCCEEEEeCCceEeCHHHHhh-c------cC-C
Confidence 3577877765431 10 1345666766 4899999987754433333332 2 11 2
Q ss_pred EEEecCCch----hhhHHHHHHhccCEEEEe
Q 046057 864 VFTIHNLEF----GTHHIGKAMTYADKATTV 890 (1198)
Q Consensus 864 V~tIHn~~~----~~~li~~~~~~AD~VitV 890 (1198)
++.+|-.-. +.+-+.+++.+-+..+.+
T Consensus 107 ~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGv 137 (215)
T 3kcq_A 107 IINIHPSLLPSFKGLNAQEQAYKAGVKIAGC 137 (215)
T ss_dssp EEEEESSCTTTTCSSCHHHHHHHHTCSEEEE
T ss_pred eEEECcccccCCCCccHHHHHHHcCCCeEEE
Confidence 577776432 234455555555554444
No 177
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=21.84 E-value=80 Score=35.08 Aligned_cols=43 Identities=19% Similarity=0.036 Sum_probs=31.2
Q ss_pred HHHHHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccc
Q 046057 1035 SHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLY 1077 (1198)
Q Consensus 1035 l~~iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~ 1077 (1198)
+..+++.+|++|--|..+..--.+..++..|+|+|+..||-..
T Consensus 82 l~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~ 124 (288)
T 3ijp_A 82 PESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTTGFSK 124 (288)
T ss_dssp HHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCH
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCH
Confidence 4566789999997765444333456789999999998887433
No 178
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=21.53 E-value=2.6e+02 Score=33.33 Aligned_cols=24 Identities=29% Similarity=0.346 Sum_probs=12.0
Q ss_pred EEcCCccHHHHHHhHHHHHHHHHH
Q 046057 358 AVEGLMDALAFEDFLLEEKRREQE 381 (1198)
Q Consensus 358 ~V~~g~~~~~~~~~~~ee~r~~~e 381 (1198)
-|..-++..++.+-.-||+|++.|
T Consensus 286 Svs~ilt~~elkqrqeee~r~~qe 309 (551)
T 2b5u_A 286 SVSDVLSPDQVKQRQDEENRRQQE 309 (551)
T ss_dssp EEEECCCHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCHHHHHHHHHHHHHHHHH
Confidence 333445555655555555554443
No 179
>2j43_A Spydx; family 41, pullulanase, streptococcal, carbohydrate-binding module, glycogen binding, glycoside hydrolase; 1.6A {Streptococcus pyogenes} SCOP: b.3.1.3 b.3.1.3
Probab=21.45 E-value=4.5e+02 Score=27.87 Aligned_cols=78 Identities=13% Similarity=0.122 Sum_probs=45.2
Q ss_pred CCCCeEEEEEcccCCCCCCCCcEEEE-eecC-----CccccccceecccccCCCCeEEEEEEecCCceeEeEEEEcCCcc
Q 046057 273 KPDQDIEVFLNRSLSTLKNEPDVLIM-GAFN-----DWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQNI 346 (1198)
Q Consensus 273 ~aG~~v~v~yN~~l~~L~~~~~v~ih-~GfN-----~W~~~~~~~~~~~t~~~~dWw~~~v~VP~~A~~lnFvF~dg~~~ 346 (1198)
.+-..|+|+|+|.-+. -...-|| |+=. +|-.... -.+++.-| =+..|.+++.+..|+|+.+++...
T Consensus 109 ~~~~~v~IhY~r~dg~---Y~~w~Lw~W~d~~~~s~~W~~~~~---ft~~D~yG--~y~~v~l~~~~~~i~fIv~~g~~~ 180 (219)
T 2j43_A 109 LKEGYLRINYHNQSGH---YDNLAVWTFKDVKTPTTDWPNGLD---LSHKGHYG--AYVDVPLKEGANEIGFLILDKSKT 180 (219)
T ss_dssp CCTTEEEEEEECSSCC---CTTEEEEEEESBSSCCCSTTCCEE---CCEEETTE--EEEEEEBCTTCCCEEEEEEETTSC
T ss_pred ccCceeEEEEeCCCCC---cccceEEEcCCCCCcccCCCCCCC---ccccCCce--EEEEEEccCCCCeeEEEEEeCCcc
Confidence 5556799999987543 4556677 5421 4643311 11222111 345567778889999999998532
Q ss_pred ccc--CCCCceEEE
Q 046057 347 YEN--NDQKDFCIA 358 (1198)
Q Consensus 347 wDN--N~g~d~~~~ 358 (1198)
-|+ .-+.|++|.
T Consensus 181 ~~~~K~~~~D~~f~ 194 (219)
T 2j43_A 181 GDAIKVQPKDYLFK 194 (219)
T ss_dssp GGGGBSSSSCEEEC
T ss_pred ccccccCCCCceEe
Confidence 122 244577664
No 180
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=21.44 E-value=1.4e+02 Score=28.60 Aligned_cols=39 Identities=13% Similarity=0.226 Sum_probs=29.1
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeE-EEEee
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNV-DIILP 751 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V-~VItP 751 (1198)
||+++|... +|+ ..-.......++.++.+.||+| .|+.-
T Consensus 1 mk~~iiv~~-~p~--~~~~~~~al~~a~a~~~~g~~v~~vff~ 40 (130)
T 2hy5_A 1 MKFALQINE-GPY--QHQASDSAYQFAKAALEKGHEIFRVFFY 40 (130)
T ss_dssp CEEEEEECS-CTT--TSTHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhcCCeeCEEEEe
Confidence 788888743 343 2245677888999999999999 88863
No 181
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=21.43 E-value=3.7e+02 Score=28.23 Aligned_cols=129 Identities=16% Similarity=0.224 Sum_probs=68.2
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhC--CCeEEEEeeCCCCCcccccccccccccccCCCceeEEeeceecCe
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDL--NHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGL 787 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~--GH~V~VItP~y~~~~~~~~~~l~~~~~~~~g~~~i~V~~~~~~Gv 787 (1198)
|||+++.+ |-+.....|..++++. +|+|..|....+... . .......|+
T Consensus 1 ~ri~vl~S---------g~gsnl~ali~~~~~~~~~~~i~~Vis~~~~~~-----~---------------~~~A~~~gI 51 (212)
T 1jkx_A 1 MNIVVLIS---------GNGSNLQAIIDACKTNKIKGTVRAVFSNKADAF-----G---------------LERARQAGI 51 (212)
T ss_dssp CEEEEEES---------SCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCH-----H---------------HHHHHHTTC
T ss_pred CEEEEEEE---------CCcHHHHHHHHHHHcCCCCceEEEEEeCCCchH-----H---------------HHHHHHcCC
Confidence 68888753 2234678888888775 578776654321100 0 012234578
Q ss_pred EEEEeCCCCCccccccccCCCCchhhHHHHHHHHHHHHHhcCCCceEEEECCCChhHHHHHHHHhhhhcCCCCCeEEEEe
Q 046057 788 SVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTI 867 (1198)
Q Consensus 788 ~v~~l~~~~~~f~rg~iYg~~dd~~Rf~~F~~aale~L~~~~~~PDVIH~Hdw~ta~va~llk~~y~~~gl~~ipvV~tI 867 (1198)
+++.+++.. + . + | .-|...+++.++. .+||+|.+-.|..-+-+.++.. + .- -++.+
T Consensus 52 p~~~~~~~~-~-~---------~--r-~~~~~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~-~------~~-~~iNi 107 (212)
T 1jkx_A 52 ATHTLIASA-F-D---------S--R-EAYDRELIHEIDM--YAPDVVVLAGFMRILSPAFVSH-Y------AG-RLLNI 107 (212)
T ss_dssp EEEECCGGG-C-S---------S--H-HHHHHHHHHHHGG--GCCSEEEESSCCSCCCHHHHHH-T------TT-SEEEE
T ss_pred cEEEeCccc-c-c---------c--h-hhccHHHHHHHHh--cCCCEEEEeChhhhCCHHHHhh-c------cC-CEEEE
Confidence 887765431 1 0 0 1 1233455666665 4899999987754333333332 2 11 25677
Q ss_pred cCCch----hhhHHHHHHhccCEEEEeC
Q 046057 868 HNLEF----GTHHIGKAMTYADKATTVS 891 (1198)
Q Consensus 868 Hn~~~----~~~li~~~~~~AD~VitVS 891 (1198)
|-.-. +.+-+.+++..-+..+.++
T Consensus 108 HpSlLP~yrG~~pi~~ai~~G~~~tGvT 135 (212)
T 1jkx_A 108 HPSLLPKYPGLHTHRQALENGDEEHGTS 135 (212)
T ss_dssp ESSCTTSCCSSCHHHHHHHTTCSEEEEE
T ss_pred ccCcccCCCCccHHHHHHHcCCCceEEE
Confidence 75432 3445555555555555443
No 182
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=21.39 E-value=1.6e+02 Score=36.18 Aligned_cols=87 Identities=15% Similarity=0.330 Sum_probs=53.7
Q ss_pred CCCcEEEEEEeCCCCCCC-CCCceEEEEEe---CCCCC------CccceeeeccccCCCCCeEEEEEEecCCc-eEEEEE
Q 046057 448 KGEDLVRLYYNKQSSSLA-HAKELWIHGGY---NNWKD------GLSIVARLVSSERTDGDWWYAKVSVPDQA-LVLDWV 516 (1198)
Q Consensus 448 ~aG~~V~v~YN~~~g~L~-ga~~I~lh~G~---N~W~~------~~~~~~~l~~~~~~~g~ww~atV~VP~~A-~~ldFv 516 (1198)
..|..|.|.++-...... -.++|+|-|.. .+|.- ... +..|. ...+..|.++|.+|... ...-||
T Consensus 577 ~~~~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a-~~~l~---~~~~~~W~~~v~l~~~~~~eyKy~ 652 (686)
T 1qho_A 577 LSGTQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNA-QGPLL---APNYPDWFYVFSVPAGKTIQFKFF 652 (686)
T ss_dssp CSSSEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCC-BCCCB---CTTTTSEEEEEEEETTCEEEEEEE
T ss_pred cCCCeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhh-hcccc---cCCCCcEEEEEEeCCCCeEEEEEE
Confidence 356788898887665554 57899999988 58985 111 10221 13345699999999864 334444
Q ss_pred EecCCCCCCccccCCCCcceEEEecC
Q 046057 517 FADGPPGKAIVYDNNSRQDFHAIVPK 542 (1198)
Q Consensus 517 FsD~~~~~~~~wDNN~g~dyh~~V~~ 542 (1198)
-.|+. +.-.|.+...+-+ .++.
T Consensus 653 ~~~~~--~~~~We~~~nr~~--~~~~ 674 (686)
T 1qho_A 653 IKRAD--GTIQWENGSNHVA--TTPT 674 (686)
T ss_dssp EECTT--SCEEECCSSCEEE--ECCS
T ss_pred EEcCC--CCEEeCCCCCeeE--ECCC
Confidence 45543 2357887544444 4543
No 183
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=21.35 E-value=1.3e+02 Score=30.55 Aligned_cols=41 Identities=10% Similarity=0.037 Sum_probs=29.8
Q ss_pred CCCCcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEe
Q 046057 706 KEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIIL 750 (1198)
Q Consensus 706 ~e~pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VIt 750 (1198)
.+..||++++.. .| .+--.--.+..|+..|.++||+|+|-.
T Consensus 3 ~~~~m~~LilLG--CP--E~Pvq~p~~lYl~~~Lk~~G~~v~VA~ 43 (157)
T 1kjn_A 3 TESTGKALMVLG--CP--ESPVQIPLAIYTSHKLKKKGFRVTVTA 43 (157)
T ss_dssp ---CCEEEEECC--CS--CSTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccceeeeEEec--CC--CCcchhhHHHHHHHHHHhcCCeeEEec
Confidence 356799887743 23 244567788899999999999999986
No 184
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=21.22 E-value=1.4e+02 Score=36.78 Aligned_cols=89 Identities=17% Similarity=0.390 Sum_probs=56.1
Q ss_pred CCCcEEEEEEeCCCCCCCCCCceEEEEEe---CCCCCCccceeeeccccCCCCCeEEEEEEecCCc-eEEEEEEecCCCC
Q 046057 448 KGEDLVRLYYNKQSSSLAHAKELWIHGGY---NNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQA-LVLDWVFADGPPG 523 (1198)
Q Consensus 448 ~aG~~V~v~YN~~~g~L~ga~~I~lh~G~---N~W~~~~~~~~~l~~~~~~~g~ww~atV~VP~~A-~~ldFvFsD~~~~ 523 (1198)
..|.+|.|.++-....+...+.|+|-|.. .+|..... +..|.......+..|.++|.+|... ...-||-.++ +
T Consensus 579 ~~~~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a-~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~~~~--~ 655 (683)
T 3bmv_A 579 LTGNQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKA-IGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIKKNG--N 655 (683)
T ss_dssp CSSSEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGC-BCSCBCSSSSCTTSEEEEEEEETTCEEEEEEEEESS--S
T ss_pred cCCCeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhh-hhhhcccCCCCCCcEEEEEEeCCCCcEEEEEEEEcC--C
Confidence 34678888888666567778899999998 49984432 1123221112345699999998752 3345555554 2
Q ss_pred CCccccCCCCcceEEEecC
Q 046057 524 KAIVYDNNSRQDFHAIVPK 542 (1198)
Q Consensus 524 ~~~~wDNN~g~dyh~~V~~ 542 (1198)
.-.|.+... -.+.++.
T Consensus 656 -~~~WE~g~N--r~~~~~~ 671 (683)
T 3bmv_A 656 -TITWEGGSN--HTYTVPS 671 (683)
T ss_dssp -CCEECCSSC--EEEECCS
T ss_pred -ceEecCCCC--eeEECCC
Confidence 468988654 4444543
No 185
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=21.21 E-value=5.4e+02 Score=29.43 Aligned_cols=129 Identities=12% Similarity=0.098 Sum_probs=75.5
Q ss_pred hccCEEEE--eCHHHHHHHhCCCCCCCCCCcEEEEeCCCCCCCCCCCCCCCCCcccccchhhhchHHHHHHHHHHhCCCC
Q 046057 882 TYADKATT--VSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRK 959 (1198)
Q Consensus 882 ~~AD~Vit--VS~~~a~el~~~~~l~~~~~K~~vI~NGID~d~~~P~~D~~Lp~~ys~~~~~~gk~~~k~aLrq~lGL~~ 959 (1198)
.++|.++. .++....++..+. .+- |-||-+ +.+.|. .--+.--.+++++|--
T Consensus 121 ~~~D~IviR~~~~~~~~~lA~~s-------~vP-VINa~~-~~~HPt----------------QaLaDl~Ti~E~~g~l- 174 (359)
T 2w37_A 121 SMFDGIEFRGFKQSDAEILARDS-------GVP-VWNGLT-DEWHPT----------------QMLADFMTVKENFGKL- 174 (359)
T ss_dssp HHCSEEEEESSCHHHHHHHHHHS-------SSC-EEEEEC-SSCCHH----------------HHHHHHHHHHHHHSCC-
T ss_pred HhcCEEEEecCChHHHHHHHHhC-------CCC-EEcCCC-CCCCcc----------------HHHHHHHHHHHHhCCc-
Confidence 35787664 3666677775321 122 447766 566662 1112223456667622
Q ss_pred CCCcEEEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecC---CChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHH
Q 046057 960 SDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSA---PDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSH 1036 (1198)
Q Consensus 960 ~d~plIg~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsg---pdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~ 1036 (1198)
+...|.++|-+ ...=.+-++.++..+ |+.|++++.. |++.+.+.+++.+++.|. .+.++-. +.
T Consensus 175 -~gl~va~vGD~-~~rva~Sl~~~~~~l---G~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~----~v~~~~d-----~~ 240 (359)
T 2w37_A 175 -QGLTLTFMGDG-RNNVANSLLVTGAIL---GVNIHIVAPKALFPTEETQNIAKGFAEKSGA----KLVITDD-----LD 240 (359)
T ss_dssp -TTCEEEEESCT-TSHHHHHHHHHHHHH---TCEEEEECCGGGSCCHHHHHHHHHHHHHHTC----CEEEESC-----HH
T ss_pred -CCeEEEEECCC-ccchHHHHHHHHHHc---CCEEEEECCccccCCHHHHHHHHHHHHHcCC----eEEEEeC-----HH
Confidence 45679999986 221244566666665 8999999853 333344455666667663 4665422 34
Q ss_pred HHHHHccEEEEcCC
Q 046057 1037 LIYAGADFILVPSI 1050 (1198)
Q Consensus 1037 ~iyA~ADi~LvPS~ 1050 (1198)
..+.+||++....+
T Consensus 241 eav~~aDvvytd~w 254 (359)
T 2w37_A 241 EGLKGSNVVYTDVW 254 (359)
T ss_dssp HHHTTCSEEEECCS
T ss_pred HHhcCCCEEEEccc
Confidence 66899999998765
No 186
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=21.13 E-value=6.8e+02 Score=25.61 Aligned_cols=109 Identities=12% Similarity=0.069 Sum_probs=61.1
Q ss_pred CcEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHH--HHccEEEEcCC-CCCCcHHHHHHHHh---
Q 046057 991 GGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIY--AGADFILVPSI-FEPCGLTQLVAMRY--- 1064 (1198)
Q Consensus 991 ~~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iy--A~ADi~LvPS~-~EpfGLt~LEAMa~--- 1064 (1198)
..+++|+.+ ++.....+..+.++.+. .|.... +.......+ ...|++|+=-. -+.-|+.+++.++.
T Consensus 23 ~~~ILivdd--~~~~~~~l~~~L~~~g~----~v~~~~--~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~ 94 (250)
T 3r0j_A 23 EARVLVVDD--EANIVELLSVSLKFQGF----EVYTAT--NGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGI 94 (250)
T ss_dssp SCEEEEECS--CHHHHHHHHHHHHHTTC----EEEEES--SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTC
T ss_pred CceEEEEEC--CHHHHHHHHHHHHHCCC----EEEEEC--CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCC
Confidence 356666665 44455556666554432 243322 222222222 23677776432 34567888887764
Q ss_pred CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHhhc
Q 046057 1065 GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSI 1117 (1198)
Q Consensus 1065 G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~~~ 1117 (1198)
.+|+|+ +......+.+ +.......||+..|.+++.|..+|..+
T Consensus 95 ~~~ii~lt~~~~~~~~~----------~~~~~Ga~~yl~Kp~~~~~L~~~i~~~ 138 (250)
T 3r0j_A 95 DAPALFLTARDSLQDKI----------AGLTLGGDDYVTKPFSLEEVVARLRVI 138 (250)
T ss_dssp CCCEEEEECSTTHHHHH----------HHHTSTTCEEEESSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHH----------HHHHcCCcEEEeCCCCHHHHHHHHHHH
Confidence 466665 4433222221 112233789999999999999998844
No 187
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=20.94 E-value=5.6e+02 Score=29.17 Aligned_cols=103 Identities=15% Similarity=0.070 Sum_probs=67.2
Q ss_pred EEEEecCCCccCHHHHHHHHHHhhcCCcEEEEEecC-C----------ChhhHHHHHHHHHHhCCCCCCcEEEEccCChH
Q 046057 965 VGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSA-P----------DPRIQNDFVNLANELHSSHADRARLCLTYDEP 1033 (1198)
Q Consensus 965 Ig~VGRL~~qKGidlIleAl~~ll~~~~qLVIvGsg-p----------dp~i~~~L~~la~eLgl~~~drV~f~g~~d~~ 1033 (1198)
+++|.-....-..+.+++.+..+.+-+.+++-.+.- | .......+.++++++|+ ..++-.+|..
T Consensus 107 ~~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl-----~~~te~~d~~ 181 (350)
T 1vr6_A 107 FTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGM-----YVVTEALGED 181 (350)
T ss_dssp EEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTC-----EEEEECSSGG
T ss_pred eEEEEeCCCcCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCC-----cEEEEeCCHH
Confidence 333433444667888888888877767776655531 1 12345677888899998 3555667777
Q ss_pred HHHHHHHHccEEEEcCC-CCCCcHHHHHHHHhCCcEEEeCC
Q 046057 1034 LSHLIYAGADFILVPSI-FEPCGLTQLVAMRYGSIPVVRKT 1073 (1198)
Q Consensus 1034 ~l~~iyA~ADi~LvPS~-~EpfGLt~LEAMa~G~PvIvt~t 1073 (1198)
.+..+..-+|++-+||+ .+.+.| +-++...|+|++.+.-
T Consensus 182 ~~~~l~~~vd~lkIgAr~~~n~~L-L~~va~~~kPVilk~G 221 (350)
T 1vr6_A 182 DLPKVAEYADIIQIGARNAQNFRL-LSKAGSYNKPVLLKRG 221 (350)
T ss_dssp GHHHHHHHCSEEEECGGGTTCHHH-HHHHHTTCSCEEEECC
T ss_pred HHHHHHHhCCEEEECcccccCHHH-HHHHHccCCcEEEcCC
Confidence 76666566999999997 344444 2333458999998543
No 188
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=20.90 E-value=4.8e+02 Score=23.75 Aligned_cols=103 Identities=9% Similarity=-0.023 Sum_probs=56.3
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEEEEccCChHHHHHHHH--HccEEEEcCCC-CCCcHHHHHHHHh----
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYA--GADFILVPSIF-EPCGLTQLVAMRY---- 1064 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~f~g~~d~~~l~~iyA--~ADi~LvPS~~-EpfGLt~LEAMa~---- 1064 (1198)
.+++|+.+ ++.....+..+.+..+ ..+..+. +.......+. ..|++++=-.. +.-|+.++..++.
T Consensus 11 ~~iLivdd--~~~~~~~l~~~L~~~~----~~v~~~~--~~~~al~~l~~~~~dlvllD~~lp~~~g~~~~~~l~~~~~~ 82 (140)
T 3c97_A 11 LSVLIAED--NDICRLVAAKALEKCT----NDITVVT--NGLQALQAYQNRQFDVIIMDIQMPVMDGLEAVSEIRNYERT 82 (140)
T ss_dssp CEEEEECC--CHHHHHHHHHHHTTTC----SEEEEES--SHHHHHHHHHHSCCSEEEECTTCCSSCHHHHHHHHHHHHHH
T ss_pred ceEEEEcC--CHHHHHHHHHHHHHcC----CceEEEC--CHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHhhhhh
Confidence 46666665 4444455555554332 2344432 2222223332 36888875432 3457777777763
Q ss_pred ----CCcEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1065 ----GSIPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1065 ----G~PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
.+|+|+ +.......... ....||+..|.+++.|..+|.
T Consensus 83 ~~~~~~~ii~~s~~~~~~~~~~-------------~g~~~~l~KP~~~~~L~~~i~ 125 (140)
T 3c97_A 83 HNTKRASIIAITADTIDDDRPG-------------AELDEYVSKPLNPNQLRDVVL 125 (140)
T ss_dssp HTCCCCCCEEEESSCCSCCCCC-------------SSCSEEEESSCCHHHHHHHHH
T ss_pred cCCCceEEEEEeCccchhHHHh-------------CChhheEeCCCCHHHHHHHHH
Confidence 345554 33222111111 125799999999999999988
No 189
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=20.53 E-value=62 Score=34.39 Aligned_cols=32 Identities=19% Similarity=0.164 Sum_probs=23.9
Q ss_pred cEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEeeC
Q 046057 710 MHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPK 752 (1198)
Q Consensus 710 MKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP~ 752 (1198)
|||++|. . |.+=..++..|.+.||+|.++...
T Consensus 1 m~i~iiG--------~---G~~G~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLG--------C---GALGQLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEEC--------C---SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEEC--------c---CHHHHHHHHHHHhCCCCEEEEEcC
Confidence 7888873 3 444457788899999999998643
No 190
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=20.42 E-value=6.9e+02 Score=27.40 Aligned_cols=114 Identities=14% Similarity=0.068 Sum_probs=64.3
Q ss_pred CcEEEEEecCCC--------ccCHHHHHHHHHHhhcCCcEEEEEec-CCChh-----hHHH-------HHHHHHHhCCCC
Q 046057 962 LPLVGIITRLTH--------QKGIHLIKHAIWRTLDRGGQVVLLGS-APDPR-----IQND-------FVNLANELHSSH 1020 (1198)
Q Consensus 962 ~plIg~VGRL~~--------qKGidlIleAl~~ll~~~~qLVIvGs-gpdp~-----i~~~-------L~~la~eLgl~~ 1020 (1198)
.+.|.-+=..+| ..+.+.+++.+.++.+.|..++=+|. +..|. ..++ ++.+.++.++
T Consensus 14 ~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~-- 91 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEV-- 91 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCC--
T ss_pred CCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCC--
Confidence 344444445555 34467777777777788988888886 21121 1222 3333332222
Q ss_pred CCcEEEEccCChHHHHH-HHHHccEEEEcCCCCCCcHHHHHHHHhCCcEEEeCCcccccccc
Q 046057 1021 ADRARLCLTYDEPLSHL-IYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVF 1081 (1198)
Q Consensus 1021 ~drV~f~g~~d~~~l~~-iyA~ADi~LvPS~~EpfGLt~LEAMa~G~PvIvt~tGGl~E~V~ 1081 (1198)
-+. +-.+..+.+.. +=+++|++---|-. ...-.+--+..||+|+|+....|.+.+..
T Consensus 92 --piS-IDT~~~~va~aAl~aGa~iINdvsg~-~d~~~~~~~a~~~~~vVlmh~~G~p~tm~ 149 (282)
T 1aj0_A 92 --WIS-VDTSKPEVIRESAKVGAHIINDIRSL-SEPGALEAAAETGLPVCLMHMQGNPKTMQ 149 (282)
T ss_dssp --EEE-EECCCHHHHHHHHHTTCCEEEETTTT-CSTTHHHHHHHHTCCEEEECCSSCTTCCS
T ss_pred --eEE-EeCCCHHHHHHHHHcCCCEEEECCCC-CCHHHHHHHHHhCCeEEEEccCCCCcccc
Confidence 133 34555544443 44689988877743 22222334568999999987777766543
No 191
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=20.26 E-value=62 Score=34.77 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=23.7
Q ss_pred CcEEEEEccccCCCCCCCcHHHHHHHHHHHHHhCCCeEEEEee
Q 046057 709 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILP 751 (1198)
Q Consensus 709 pMKIL~Vs~e~~P~akvGGl~~vV~~LarAL~~~GH~V~VItP 751 (1198)
.|||++|. +|.+=..++..|.+.||+|.++..
T Consensus 3 ~m~i~iiG-----------~G~~G~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAG-----------AGAMGSRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEEC-----------CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEEC-----------cCHHHHHHHHHHHhCCCcEEEEEC
Confidence 48999883 344456678889999999998864
No 192
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=20.04 E-value=4.7e+02 Score=23.37 Aligned_cols=108 Identities=12% Similarity=0.085 Sum_probs=61.5
Q ss_pred cEEEEEecCCChhhHHHHHHHHHHhCCCCCCcEE-EEccCChHHHHHHHHHccEEEEcCC-CCCCcHHHHHHHHh---CC
Q 046057 992 GQVVLLGSAPDPRIQNDFVNLANELHSSHADRAR-LCLTYDEPLSHLIYAGADFILVPSI-FEPCGLTQLVAMRY---GS 1066 (1198)
Q Consensus 992 ~qLVIvGsgpdp~i~~~L~~la~eLgl~~~drV~-f~g~~d~~~l~~iyA~ADi~LvPS~-~EpfGLt~LEAMa~---G~ 1066 (1198)
.+++|+.+ ++.....+..+..+.+. .+. ......+.....--...|++++-.. .+.-|+.+++.++. .+
T Consensus 2 ~~ilivdd--~~~~~~~l~~~L~~~g~----~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~ 75 (134)
T 3f6c_A 2 LNAIIIDD--HPLAIAAIRNLLIKNDI----EILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSG 75 (134)
T ss_dssp EEEEEECC--CHHHHHHHHHHHHHTTE----EEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCS
T ss_pred eEEEEEcC--CHHHHHHHHHHHhhCCc----EEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCC
Confidence 35666765 45566677777776542 233 3333333332222245788887544 35567888877764 45
Q ss_pred cEEE-eCCccccccccccccchhhhhccCCCCcEEEEcCCCHHHHHHHHh
Q 046057 1067 IPVV-RKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALN 1115 (1198)
Q Consensus 1067 PvIv-t~tGGl~E~V~d~d~~~~~~~~~~~~~nG~lf~~~D~~~La~AL~ 1115 (1198)
|+|+ +.... .+.+.. +. ..+..+++..|.+++.|..+|.
T Consensus 76 ~ii~~s~~~~-~~~~~~-------~~--~~g~~~~l~kp~~~~~l~~~i~ 115 (134)
T 3f6c_A 76 IIIIVSAKND-HFYGKH-------CA--DAGANGFVSKKEGMNNIIAAIE 115 (134)
T ss_dssp EEEEEECC----CTHHH-------HH--HTTCSEEEEGGGCTHHHHHHHH
T ss_pred eEEEEeCCCC-hHHHHH-------HH--HhCCCEEEeCCCCHHHHHHHHH
Confidence 5655 33222 112111 11 1227899999999999999998
Done!